Citrus Sinensis ID: 018022

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360--
Protein Sequence
MDIEKPSNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGTRAG
Secondary Structure (PSIPRED)
ccccccccccccccEEEEEEEEcccccccEEEEEEEccccccEEEEEEEEEEcccccccccccccccccccEEccccccEEEEEEcccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccEEEEEccEEEEcccccccccEEEEccccccccHHHEEccccccccEEEEEcccHHHHHHHHHHHHccccEEEEEEccccHHHHHHHccccEEEcccccccccHHHHHHHHccccccEEEEccccHHHHHHHHHHccccccEEEEEEEccccccEEEcccccEEcccEEEEEEcccccccccHHHHHHHHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccEEEEEEEEcccccccEEEEEEEccccccEEEEEEEEEEEcHHHHHHHHcccccccccEccccEEEEEEEEEcccccccccccEEEEcccccccccHHHHccccccccccHHHHHccccccccccEEEcccEEEEccccccccEcEEEEEHHHEEEccccccHHHHHHHHcHHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHcccEEEcHHHcccccHHHEEEEcccccccEEEEEcccHHHHHHHHHHHHccccEEEEEEEcccccEEEcccEEEEEcccEEEEEEccccccccHcHHHHHHHHcccccccHHHHccc
Coil and Loop (DISEMBL)
mdiekpsnktagkpiqcraaiatapgeplvidevivdppnsheVRVRIICTSLChsdvtfwkmkdfpavfprilgHEAIGVVEsvgenvdgvvegdvviphfladctecvgcrskkgnlcsafpfkispwmprdqtsrfkdlrgetihhfvsvssfseytvLDIAHvvkvdptvppnracllscgvstgvgAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKfeigkrfgvtefvnskncgdksvSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVlgvdqpgsqlslssFEVLHSGKILMGslfgglkaksdiPILLKRYMdkwsyvpfsgtrag
Flexible Loop (DISEMBL)
mdiekpsnktagkpiqCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSafpfkispwmprdQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRfgvtefvnskncgdksVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKrymdkwsyvpfsgtrag
Low Complexity Region (SEG)
MDIEKPSNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIgvvesvgenvdgvvegdvvIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGTRAG
Disordered region (IsUnstruct)
***************QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVPF******
Disordered Region (DISOPRED)
***************QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGTR**
Disordered Region (DISEMBL)
************KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGTRAG
Disordered Region (DISPRO)
***********GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGTRA*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDIEKPSNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGTRAG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	362	2.2.26 [Sep-21-2011]
Q9FH04	390	Alcohol dehydrogenase-lik	yes	no	0.941	0.874	0.733	1e-150
Q9SK87	386	Alcohol dehydrogenase-lik	no	no	0.939	0.880	0.606	1e-116
Q9SK86	388	Alcohol dehydrogenase-lik	no	no	0.933	0.871	0.589	1e-114
Q0V7W6	389	Alcohol dehydrogenase-lik	no	no	0.933	0.868	0.589	1e-112
Q96533	379	Alcohol dehydrogenase cla	no	no	0.925	0.883	0.498	2e-94
A2XAZ3	381	Alcohol dehydrogenase cla	N/A	no	0.941	0.895	0.486	5e-93
Q0DWH1	381	Alcohol dehydrogenase cla	no	no	0.941	0.895	0.486	7e-93
P93629	381	Alcohol dehydrogenase cla	N/A	no	0.941	0.895	0.478	5e-91
P80572	378	Alcohol dehydrogenase cla	N/A	no	0.933	0.894	0.482	6e-90
P25141	382	Alcohol dehydrogenase 1 O	N/A	no	0.941	0.892	0.479	2e-86

>sp|Q9FH04|ADHL7_ARATH Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana GN=At5g42250 PE=2 SV=1

 Score =  530 bits (1365), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 251/342 (73%), Positives = 296/342 (86%), Gaps = 1/342 (0%)

Query: 8   NKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP 67
           NK++ KPI+C+AA++   GEPLV++E++V PP   EVR+RIICT+LCHSDVTFWK++  P
Sbjct: 10  NKSSHKPIRCKAAVSRKAGEPLVMEEIMVAPPQPFEVRIRIICTALCHSDVTFWKLQVPP 69

Query: 68  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 127
           A FPRILGHEAIGVVESVGENV  VVEGD V+P F+ DC +CV C+S K NLCS FPFK+
Sbjct: 70  ACFPRILGHEAIGVVESVGENVKEVVEGDTVLPTFMPDCGDCVDCKSHKSNLCSKFPFKV 129

Query: 128 SPWMPR-DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 186
           SPWMPR D +SRF DL GET+ HF++VSSFSEYTVLD+A+VVK+D ++PP+RACLLSCGV
Sbjct: 130 SPWMPRYDNSSRFTDLNGETLFHFLNVSSFSEYTVLDVANVVKIDSSIPPSRACLLSCGV 189

Query: 187 STGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 246
           STGVGAAW TA VE GSTVVIFGLGSIGLAVAEGARLCGA+RIIGVD+   KF++G++FG
Sbjct: 190 STGVGAAWETAKVEKGSTVVIFGLGSIGLAVAEGARLCGASRIIGVDINPTKFQVGQKFG 249

Query: 247 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306
           VTEFVNS  C    VS++I +MTDGGADYCFECVG +SLVQEAYACCR+GWGKTI LGVD
Sbjct: 250 VTEFVNSMTCEKNRVSEVINEMTDGGADYCFECVGSSSLVQEAYACCRQGWGKTITLGVD 309

Query: 307 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYM 348
           +PGSQ+ L SF+VLH GKILMGSLFGGLKAK+ IPILLKRY+
Sbjct: 310 KPGSQICLDSFDVLHHGKILMGSLFGGLKAKTHIPILLKRYL 351

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1

>sp|Q9SK87|ADHL2_ARATH Alcohol dehydrogenase-like 2 OS=Arabidopsis thaliana GN=At1g22440 PE=2 SV=1

 Score =  418 bits (1074), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 208/343 (60%), Positives = 264/343 (76%), Gaps = 3/343 (0%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-A 68
           T GKPI+C+AAI    GEPLVI+E+ VDPP ++EVR++I+CTSLCH+DVTFWK+   P A
Sbjct: 7   TEGKPIRCKAAILRKAGEPLVIEEIQVDPPQAYEVRIKILCTSLCHTDVTFWKLDSGPLA 66

Query: 69  VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK-I 127
            FPRILGHEA+GVVES+GE VDG  +GDVV+P F   C EC  C S K N C+ +    +
Sbjct: 67  RFPRILGHEAVGVVESIGEKVDGFKQGDVVLPVFHPQCEECKECISPKSNWCTKYTNDYL 126

Query: 128 SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 187
           S       TSRFKD RGE IHHF+ VSSF+EYTV+DIAH+VK+ P +P + A LLSC V+
Sbjct: 127 SNTRRYGMTSRFKDSRGEDIHHFIFVSSFTEYTVVDIAHLVKISPEIPVDIAALLSCSVA 186

Query: 188 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247
           TG+GAAW+ A+VE GSTVVIFGLG++GLAVAEG RL GA +IIGVD+   KFEIGKRFG+
Sbjct: 187 TGLGAAWKVADVEEGSTVVIFGLGAVGLAVAEGVRLRGAAKIIGVDLNPAKFEIGKRFGI 246

Query: 248 TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 307
           T+FVN   CG+K++S++I +MTD GADY FEC+GLASL++EA+   R G GKTIVLG++Q
Sbjct: 247 TDFVNPALCGEKTISEVIREMTDVGADYSFECIGLASLMEEAFKSTRPGSGKTIVLGMEQ 306

Query: 308 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
               +SL S+++L  G+ + G+LFGGLK K DIPIL+ RY+ K
Sbjct: 307 KALPISLGSYDLLR-GRTVCGTLFGGLKPKLDIPILVDRYLKK 348

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q9SK86|ADHL1_ARATH Alcohol dehydrogenase-like 1 OS=Arabidopsis thaliana GN=At1g22430 PE=2 SV=1

 Score =  413 bits (1062), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 201/341 (58%), Positives = 262/341 (76%), Gaps = 3/341 (0%)

Query: 12  GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVF 70
           GKPI C+AAI    GE LVI+++ VDPP ++EVR++I+CTSLCH+D+TFWK+   P + F
Sbjct: 11  GKPITCKAAICRKAGEALVIEDIHVDPPQAYEVRIKILCTSLCHTDLTFWKLSFGPISRF 70

Query: 71  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK-ISP 129
           PRILGHEA+GVVES+GENVDG  +GDVV+P F   C EC  C+S K N C  +    IS 
Sbjct: 71  PRILGHEAVGVVESIGENVDGFKQGDVVLPVFHPYCEECKDCKSSKTNWCDRYAEDFISN 130

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
                  SRFKD  GE IHHF+ VSSFSEYTV+DIAH+VK+ P +P ++A LLSCGVSTG
Sbjct: 131 TRRYGMASRFKDSSGEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDKAALLSCGVSTG 190

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
           +GAAW+ ANVE GST+ IFGLG++GLAVAEGARL GA +IIG+D  S+KFE+GK+FG T+
Sbjct: 191 IGAAWKVANVEEGSTIAIFGLGAVGLAVAEGARLRGAAKIIGIDTNSDKFELGKKFGFTD 250

Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
           F+N   CG+K +S++I +MT+GG DY FECVGLASL+ EA+   R G GKT++LG+++  
Sbjct: 251 FINPTLCGEKKISEVIKEMTEGGVDYSFECVGLASLLNEAFISTRTGTGKTVMLGMEKHA 310

Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
           + +SL SF++L  G+++ GSLFGGLK+K DIPIL+  Y+ K
Sbjct: 311 APISLGSFDLLR-GRVICGSLFGGLKSKLDIPILVDHYLKK 350

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q0V7W6|ADHL5_ARATH Alcohol dehydrogenase-like 5 OS=Arabidopsis thaliana GN=At4g22110 PE=2 SV=1

 Score =  404 bits (1038), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/341 (58%), Positives = 262/341 (76%), Gaps = 3/341 (0%)

Query: 12  GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVF 70
           GKPI+C+AA++  PGE LVI+E+ VDPP ++EVR++IICTSLCH+DV+F K+   P A F
Sbjct: 12  GKPIRCKAAVSRKPGEALVIEEIHVDPPQAYEVRIKIICTSLCHTDVSFSKIDSGPLARF 71

Query: 71  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK-ISP 129
           PRILGHEA+GV+ES+GE+V+G  +GDVV+P F   C EC  C+S K N C+ F    +S 
Sbjct: 72  PRILGHEAVGVIESIGEHVNGFQQGDVVLPVFHPHCEECRDCKSSKSNWCARFADDFLSN 131

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
                 TSRFKD  GE I+HF+ VSSFSEYTV+DIAH+VK+ P +P ++A LLSCGVSTG
Sbjct: 132 TRRYGMTSRFKDSFGEDIYHFLFVSSFSEYTVVDIAHLVKISPDIPVDKAALLSCGVSTG 191

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
           +GAAW+ ANVE GSTV +FGLG++GLAV EGARL GA +IIGVD+  EKFE+GK+FG T+
Sbjct: 192 IGAAWKVANVEKGSTVAVFGLGAVGLAVGEGARLRGAGKIIGVDLNPEKFELGKKFGFTD 251

Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
           F+NS  CG+  +S++I +MT GG DY FECVGL SL+ EA++  R G GKT+VLG+D+  
Sbjct: 252 FINSTLCGENKISEVIKEMTGGGVDYSFECVGLPSLLTEAFSSTRTGSGKTVVLGIDKHL 311

Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
           + +SL SF++L  G+ + GSLFGGLK K DIPIL+  Y+ K
Sbjct: 312 TPVSLGSFDLLR-GRHVCGSLFGGLKPKLDIPILVDHYLKK 351

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q96533|ADHX_ARATH Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2

 Score =  346 bits (887), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 172/345 (49%), Positives = 241/345 (69%), Gaps = 10/345 (2%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           T G+ I C+AA+A  P +PLVI++V V PP + EVR++I+ T+LCH+D   W  KD   +
Sbjct: 3   TQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGL 62

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLC----SAFPF 125
           FP ILGHEA G+VESVGE V  V  GD VIP + A+C EC  C+S K NLC    SA   
Sbjct: 63  FPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGV 122

Query: 126 KISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
            I   M  D+ SRF  + G+ I+HF+  S+FS+YTV+    V K+DPT P ++ CLL CG
Sbjct: 123 GI---MMNDRKSRF-SVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCG 178

Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245
           V TG+GA W TA VE GS V IFGLG++GLAVAEGA+  GA+RIIG+D+ S+K+E  K+F
Sbjct: 179 VPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF 238

Query: 246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
           GV EFVN K+  DK + ++I+D+TDGG DY FEC+G  S+++ A  CC KGWG ++++GV
Sbjct: 239 GVNEFVNPKD-HDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297

Query: 306 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
              G ++S   F+++ +G++  G+ FGG K+++ +P L+++YM+K
Sbjct: 298 AASGQEISTRPFQLV-TGRVWKGTAFGGFKSRTQVPWLVEKYMNK 341

Plays a central role in formaldehyde detoxification.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|A2XAZ3|ADHX_ORYSI Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1

 Score =  341 bits (874), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 168/345 (48%), Positives = 239/345 (69%), Gaps = 4/345 (1%)

Query: 7   SNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF 66
           ++ T G+ I C+AA+A    +P+ I++V V PP + EVRV+I+ T+LCH+D   W  KD 
Sbjct: 2   ASSTQGQVITCKAAVAWEANKPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDP 61

Query: 67  PAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 126
             +FP ILGHEA G+VESVGE V  V  GD VIP + A+C EC  C+S K NLC      
Sbjct: 62  EGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAA 121

Query: 127 ISPW-MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
                M  D+ SRF  + G+ I+HF+  S+FS+YTV+    V K++P  P ++ CLL CG
Sbjct: 122 TGVGVMMNDRKSRF-SINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCG 180

Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245
           VSTG+GA W TA VE GS V IFGLG++GLAVAEGA+  GA+RIIG+D+ S+KF++ K F
Sbjct: 181 VSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNF 240

Query: 246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
           GVTEFVN K+  DK + Q+I+D+TDGG DY FEC+G  S+++ A  CC KGWG ++++GV
Sbjct: 241 GVTEFVNPKD-HDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGV 299

Query: 306 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
              G ++S   F+++ +G++  G+ FGG K++S +P L+++Y++K
Sbjct: 300 AASGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVEKYLNK 343

Oryza sativa subsp. indica (taxid: 39946)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|Q0DWH1|ADHX_ORYSJ Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1

 Score =  340 bits (873), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 168/345 (48%), Positives = 238/345 (68%), Gaps = 4/345 (1%)

Query: 7   SNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF 66
           ++ T G+ I C+AA+A     P+ I++V V PP + EVRV+I+ T+LCH+D   W  KD 
Sbjct: 2   ASSTQGQVITCKAAVAWEANRPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDP 61

Query: 67  PAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 126
             +FP ILGHEA G+VESVGE V  V  GD VIP + A+C EC  C+S K NLC      
Sbjct: 62  EGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAA 121

Query: 127 ISPW-MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
                M  D+ SRF  + G+ I+HF+  S+FS+YTV+    V K++P  P ++ CLL CG
Sbjct: 122 TGVGVMMNDRKSRF-SINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCG 180

Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245
           VSTG+GA W TA VE GS V IFGLG++GLAVAEGA+  GA+RIIG+D+ S+KF++ K F
Sbjct: 181 VSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNF 240

Query: 246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
           GVTEFVN K+  DK + Q+I+D+TDGG DY FEC+G  S+++ A  CC KGWG ++++GV
Sbjct: 241 GVTEFVNPKD-HDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGV 299

Query: 306 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
              G ++S   F+++ +G++  G+ FGG K++S +P L+++Y++K
Sbjct: 300 AASGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVEKYLNK 343

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|P93629|ADHX_MAIZE Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1

 Score =  335 bits (858), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 165/345 (47%), Positives = 235/345 (68%), Gaps = 4/345 (1%)

Query: 7   SNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF 66
           ++ T G+ I C+AA+A  P +PLVI++V V PP + EVRV+I+ T+LCH+D   W  KD 
Sbjct: 2   ASPTQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDP 61

Query: 67  PAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 126
             +FP ILGHEA G+VESVGE V  V  GD VIP + A+C EC  C+S K NLC      
Sbjct: 62  EGLFPCILGHEAAGIVESVGEGVTDVQPGDHVIPCYQAECKECKFCKSGKTNLCGKVRSA 121

Query: 127 ISPW-MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
                M  D  SRF  + G+ I+HF+  S+FS+YTV+    V K++P  P ++ CLL CG
Sbjct: 122 TGVGVMMNDMKSRF-SVNGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCG 180

Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245
           V TG+GA W TA VE GS V +FGLG++GLAVAEGA+  GA+R+IG+D+ ++KF++ K F
Sbjct: 181 VPTGLGAVWNTAKVESGSVVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDNKKFDVAKNF 240

Query: 246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
           GVTEFVN K   DK + Q+++D+TDGG DY FEC+G  S+++ A  C  KGWG ++++GV
Sbjct: 241 GVTEFVNPKE-HDKPIQQVLVDLTDGGVDYSFECIGNVSIMRAALECSDKGWGTSVIVGV 299

Query: 306 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
              G ++S   F+++ +G++  G+ FGG K+++ +P L+ +YM K
Sbjct: 300 AASGQEISTRPFQLV-TGRVWKGTAFGGFKSRTQVPWLVDKYMKK 343

Zea mays (taxid: 4577)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|P80572|ADHX_PEA Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1

 Score =  331 bits (848), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 165/342 (48%), Positives = 234/342 (68%), Gaps = 4/342 (1%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           T G+ I C+AA+A  P +PL I++V V PP ++EVR++I+ T+LCH+D      KD   +
Sbjct: 2   TQGQVITCKAAVAWEPNKPLTIEDVEVAPPQANEVRIQILFTALCHTDAYTLGGKDPEGL 61

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FP ILGHEA G+VESVGE V  V  GD VIP + A+C EC  C+S K NLC         
Sbjct: 62  FPCILGHEAAGIVESVGEGVTDVKPGDHVIPSYQAECGECKFCKSPKTNLCGKVRAATGV 121

Query: 130 W-MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVST 188
             M  D+ SRF  ++G+ I+HF+  S+FS+YTV+    V K+ P  P ++ CLL CGV T
Sbjct: 122 GVMMADRKSRF-SVKGKPIYHFMGTSTFSQYTVVHDVSVAKIHPDAPLDKVCLLGCGVPT 180

Query: 189 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 248
           G+GA W TA VE GS V IFGLG++GLAVAEGA+  GA+RIIG+D+ S K++  K FGVT
Sbjct: 181 GLGAVWNTAKVEPGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSNKYDTAKNFGVT 240

Query: 249 EFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 308
           EF+N K+  +K + Q+IID+TDGG DY FEC+G  S+++ A  CC KGWG ++++GV   
Sbjct: 241 EFINPKD-HEKPIQQVIIDLTDGGVDYSFECLGNVSVMRSALECCHKGWGTSVIVGVAAS 299

Query: 309 GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
           G ++S   F+++ +G++  G+ FGG K++S +P L+++Y+ K
Sbjct: 300 GQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVEKYLKK 340

Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione.

Pisum sativum (taxid: 3888)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|P25141|ADH1_PETHY Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1

 Score =  319 bits (818), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 166/346 (47%), Positives = 221/346 (63%), Gaps = 5/346 (1%)

Query: 7   SNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF 66
           S+ TAG+ I+C+AA+A   G+PLVI+EV V PP   EVR++I+ TSLCH+DV FW+ K  
Sbjct: 2   SSNTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKMEVRLKILFTSLCHTDVYFWEAKGQ 61

Query: 67  PAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 126
             +FPRI GHEA G+VESVGE V  +  GD V+P F  +C +C  C+S++ N+C      
Sbjct: 62  TPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECQQCRHCKSEESNMCDLLRIN 121

Query: 127 ISPW-MPRDQTSRF-KDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC 184
                M  D  +RF KD  G+ I+HFV  S+FSEYTV     V K+DP  P ++ C+LSC
Sbjct: 122 TDRGVMIHDGQTRFSKD--GKPIYHFVGTSTFSEYTVCHSGCVTKIDPQAPLDKVCVLSC 179

Query: 185 GVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244
           G+STG+GA    A    GSTV IFGLG++GLA AEGAR+ GA+RIIGVD+   +F   K+
Sbjct: 180 GISTGLGATLNVAKPTKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFNDAKK 239

Query: 245 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 304
           FGVTEFVN K+ GDK V Q+I +MTDGG D   EC G  + +  A+ C   GWG  +++G
Sbjct: 240 FGVTEFVNPKDHGDKPVQQVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVG 299

Query: 305 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
           V             +L+  + L G+ FG  K KSDIP ++ +YM K
Sbjct: 300 VPNKDDAFKTHPMNLLNE-RTLKGTFFGNYKPKSDIPSVVDKYMKK 344

This protein is responsible for the conversion of alcohols to aldehydes in plants and is important for NAD metabolism during anaerobic respiration.

Petunia hybrida (taxid: 4102)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	362
255539138	386	alcohol dehydrogenase, putative [Ricinus	0.941	0.883	0.771	1e-156
225459818	384	PREDICTED: alcohol dehydrogenase-like 7	0.950	0.895	0.741	1e-152
7705214	389	alcohol dehydrogenase ADH [Solanum lycop	0.939	0.874	0.738	1e-151
15238330	390	alcohol dehydrogenase-like 7 [Arabidopsi	0.941	0.874	0.733	1e-148
297795321	390	hypothetical protein ARALYDRAFT_494804 [	0.947	0.879	0.720	1e-148
7705215	390	alcohol dehydrogenase ADH [Solanum lycop	0.947	0.879	0.728	1e-147
356554319	387	PREDICTED: alcohol dehydrogenase-like 7-	0.958	0.896	0.729	1e-147
356554321	388	PREDICTED: alcohol dehydrogenase-like 7-	0.966	0.902	0.725	1e-147
224065707	398	predicted protein [Populus trichocarpa]	0.964	0.876	0.76	1e-147
359492331	395	PREDICTED: alcohol dehydrogenase-like 7-	0.947	0.868	0.702	1e-145

>gi|255539138|ref|XP_002510634.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223551335|gb|EEF52821.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  557 bits (1435), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 263/341 (77%), Positives = 301/341 (88%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           + G PI+C+AA+   PGEPLVI+E++V PPN HEVR++IICTSLC SD+TFW++KDFPAV
Sbjct: 8   SVGTPIRCKAAVCRKPGEPLVIEEILVAPPNRHEVRIQIICTSLCQSDITFWRLKDFPAV 67

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FPRILGHEA+GVVESVGE+V    EGD VIP FL DC +C  C SKK NLCS  PFK+SP
Sbjct: 68  FPRILGHEAVGVVESVGEDVKEFKEGDTVIPTFLPDCGDCTDCISKKSNLCSKLPFKVSP 127

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
           WMPR +TSRF DL GE ++HF+SVSSFS+YTV+DIAH+ KVDP++PPNRACLLSCGVSTG
Sbjct: 128 WMPRYETSRFTDLNGEALYHFLSVSSFSQYTVIDIAHLTKVDPSIPPNRACLLSCGVSTG 187

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
           VGAAWRTANVE GSTVVIFGLGSIGLAVAEGARLCGATRIIGVD    KFEIGK+FGVTE
Sbjct: 188 VGAAWRTANVEAGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDTNPNKFEIGKKFGVTE 247

Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
           FV++ + G+KS SQ+I +MT GGADYCFECVGLASLV+EAY+CCRKGWGKTIVLGVD+PG
Sbjct: 248 FVSAGDLGNKSASQVINEMTGGGADYCFECVGLASLVREAYSCCRKGWGKTIVLGVDKPG 307

Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
           +QLSLSSF+VLHSGKIL GSLFGGLKAKSDIP+LLKRY  K
Sbjct: 308 AQLSLSSFDVLHSGKILTGSLFGGLKAKSDIPVLLKRYTAK 348

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459818|ref|XP_002285916.1| PREDICTED: alcohol dehydrogenase-like 7 [Vitis vinifera] gi|302141683|emb|CBI18886.3| unnamed protein product [Vitis vinifera]

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 255/344 (74%), Positives = 301/344 (87%)

Query: 7   SNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF 66
           + +T GKPI+CRAA+    GEPLV++EV+V PP + EVR+RIICTSLC+SD+TFWK+KD 
Sbjct: 3   AGETRGKPIRCRAAVCWKAGEPLVMEEVMVAPPLAGEVRIRIICTSLCYSDITFWKLKDP 62

Query: 67  PAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 126
           P  FPRILGHEA+GVVESVGENV  V EGD+V+P FL DC EC  CRS+K NLCS FPFK
Sbjct: 63  PGCFPRILGHEAVGVVESVGENVSEVTEGDIVLPIFLPDCGECTDCRSEKSNLCSKFPFK 122

Query: 127 ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 186
           +SPWMPR ++SRF DL+GE ++HF+ VSSFSEYTV+DIA++ K+DP +PPNRACL SCGV
Sbjct: 123 VSPWMPRYESSRFTDLKGEVLYHFLFVSSFSEYTVVDIANITKIDPNIPPNRACLFSCGV 182

Query: 187 STGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 246
           STGVGAAW+TANVE GSTV IFGLG+IGLAVAEGARLCGA+RIIGVD+  +KFEIGK+FG
Sbjct: 183 STGVGAAWKTANVEKGSTVAIFGLGAIGLAVAEGARLCGASRIIGVDLNPDKFEIGKKFG 242

Query: 247 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306
           VT+FVNS NCG+K V Q+I++MTDGGADYCFECVG ASLV EA+ACCRKGWGKTIVLGVD
Sbjct: 243 VTDFVNSGNCGNKPVKQVIMEMTDGGADYCFECVGAASLVHEAFACCRKGWGKTIVLGVD 302

Query: 307 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
           +PGS L+  SF++LHSGK LMGSL+GG+K KSDIPILLKRYMDK
Sbjct: 303 RPGSMLNFLSFDILHSGKSLMGSLYGGVKPKSDIPILLKRYMDK 346

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|7705214|gb|AAB33480.2| alcohol dehydrogenase ADH [Solanum lycopersicum]

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 251/340 (73%), Positives = 298/340 (87%)

Query: 11  AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF 70
           AGKPI+C+AA+A   GEPLVI+EVIV PP +HEVRV+IICTSLCH+D+T WK+K+FP  F
Sbjct: 11  AGKPIRCKAAVARKAGEPLVIEEVIVAPPKAHEVRVKIICTSLCHTDITLWKLKEFPGCF 70

Query: 71  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
           PRILGHEA GVVESVGE+VD + EGD V+P FL DC +CV C+SKK NLCS FP ++SP 
Sbjct: 71  PRILGHEAFGVVESVGEDVDELKEGDSVVPIFLPDCMDCVDCKSKKSNLCSKFPIQVSPL 130

Query: 131 MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGV 190
           + R+ TSRF +  GET+HHF+ +SSFSEYTV+D+ +V K+DP +PPNRACLLSCGVSTGV
Sbjct: 131 LHRNDTSRFSNAAGETLHHFLYISSFSEYTVVDVVNVTKIDPEIPPNRACLLSCGVSTGV 190

Query: 191 GAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250
           GAAW+TANVE GSTVVIFGLGSIGLAVAEGARLCGATRIIGVD+ S KFEIGK+FG+TEF
Sbjct: 191 GAAWKTANVEPGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDINSNKFEIGKQFGITEF 250

Query: 251 VNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS 310
           VNSK+C DK +SQ+II+MTDGGADYCFECVGLA+LVQEA+ CCRKGWGKT+VLGVD+P +
Sbjct: 251 VNSKSCVDKPISQVIIEMTDGGADYCFECVGLATLVQEAFTCCRKGWGKTVVLGVDKPDA 310

Query: 311 QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
            L+L+SFEVL S K L G+LFGGLK KSD+PIL+KRY+DK
Sbjct: 311 HLNLNSFEVLQSQKTLTGALFGGLKPKSDVPILVKRYLDK 350

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15238330|ref|NP_199040.1| alcohol dehydrogenase-like 7 [Arabidopsis thaliana] gi|75333830|sp|Q9FH04.1|ADHL7_ARATH RecName: Full=Alcohol dehydrogenase-like 7 gi|10177010|dbj|BAB10198.1| alcohol dehydrogenase [Arabidopsis thaliana] gi|19698971|gb|AAL91221.1| alcohol dehydrogenase [Arabidopsis thaliana] gi|22136298|gb|AAM91227.1| alcohol dehydrogenase [Arabidopsis thaliana] gi|332007405|gb|AED94788.1| alcohol dehydrogenase-like 7 [Arabidopsis thaliana]

 Score =  530 bits (1365), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 251/342 (73%), Positives = 296/342 (86%), Gaps = 1/342 (0%)

Query: 8   NKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP 67
           NK++ KPI+C+AA++   GEPLV++E++V PP   EVR+RIICT+LCHSDVTFWK++  P
Sbjct: 10  NKSSHKPIRCKAAVSRKAGEPLVMEEIMVAPPQPFEVRIRIICTALCHSDVTFWKLQVPP 69

Query: 68  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 127
           A FPRILGHEAIGVVESVGENV  VVEGD V+P F+ DC +CV C+S K NLCS FPFK+
Sbjct: 70  ACFPRILGHEAIGVVESVGENVKEVVEGDTVLPTFMPDCGDCVDCKSHKSNLCSKFPFKV 129

Query: 128 SPWMPR-DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 186
           SPWMPR D +SRF DL GET+ HF++VSSFSEYTVLD+A+VVK+D ++PP+RACLLSCGV
Sbjct: 130 SPWMPRYDNSSRFTDLNGETLFHFLNVSSFSEYTVLDVANVVKIDSSIPPSRACLLSCGV 189

Query: 187 STGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 246
           STGVGAAW TA VE GSTVVIFGLGSIGLAVAEGARLCGA+RIIGVD+   KF++G++FG
Sbjct: 190 STGVGAAWETAKVEKGSTVVIFGLGSIGLAVAEGARLCGASRIIGVDINPTKFQVGQKFG 249

Query: 247 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306
           VTEFVNS  C    VS++I +MTDGGADYCFECVG +SLVQEAYACCR+GWGKTI LGVD
Sbjct: 250 VTEFVNSMTCEKNRVSEVINEMTDGGADYCFECVGSSSLVQEAYACCRQGWGKTITLGVD 309

Query: 307 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYM 348
           +PGSQ+ L SF+VLH GKILMGSLFGGLKAK+ IPILLKRY+
Sbjct: 310 KPGSQICLDSFDVLHHGKILMGSLFGGLKAKTHIPILLKRYL 351

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297795321|ref|XP_002865545.1| hypothetical protein ARALYDRAFT_494804 [Arabidopsis lyrata subsp. lyrata] gi|297311380|gb|EFH41804.1| hypothetical protein ARALYDRAFT_494804 [Arabidopsis lyrata subsp. lyrata]

 Score =  529 bits (1363), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 248/344 (72%), Positives = 298/344 (86%), Gaps = 1/344 (0%)

Query: 8   NKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP 67
           NK++ KPI+C+AA++   GEPLV++E++V PP  +EVR+RIICT+LCHSDVTFWK++  P
Sbjct: 10  NKSSRKPIRCKAAVSRKAGEPLVMEEIMVAPPQPYEVRIRIICTALCHSDVTFWKLQVPP 69

Query: 68  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 127
           A FPRILGHEAIGVVESVGENV  VVEGD V+P F+ DC ECV C+S+K NLCS FPFK+
Sbjct: 70  ACFPRILGHEAIGVVESVGENVKEVVEGDTVLPTFMPDCGECVDCKSQKSNLCSKFPFKV 129

Query: 128 SPWMPR-DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 186
           SPWMPR + +SRF DL G+T+ HF++VSSFSEYTVLD+A++VK+D ++PP+RACLLSCGV
Sbjct: 130 SPWMPRYENSSRFTDLNGQTLFHFLNVSSFSEYTVLDVANIVKIDSSIPPSRACLLSCGV 189

Query: 187 STGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 246
           STGVGAAW TA VE GSTVVIFGLGSIGLAVAEGARLCGA+RIIGVD+   KF++G+ FG
Sbjct: 190 STGVGAAWETAKVEQGSTVVIFGLGSIGLAVAEGARLCGASRIIGVDINPAKFQVGQNFG 249

Query: 247 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306
           +TEFVNS  C  KSVS++I +MT GGADYCFECVG +SLVQEAYACCR+GWGKTI LGVD
Sbjct: 250 ITEFVNSMTCEKKSVSEVINEMTGGGADYCFECVGSSSLVQEAYACCRQGWGKTITLGVD 309

Query: 307 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
           +PGSQ+ L SF+VLH GKILMGSLFGGLKAK+ IP+LLKRY+  
Sbjct: 310 KPGSQICLDSFDVLHHGKILMGSLFGGLKAKTHIPLLLKRYLSN 353

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|7705215|gb|AAB33481.2| alcohol dehydrogenase ADH [Solanum lycopersicum]

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 250/343 (72%), Positives = 295/343 (86%)

Query: 8   NKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP 67
           +KTAGKPI+CRAA+A   GEPLVI+EVIV PP +HEVR++IICTSLCH+D+T WK+K+FP
Sbjct: 10  SKTAGKPIRCRAAVARKAGEPLVIEEVIVAPPKAHEVRLKIICTSLCHTDITLWKLKEFP 69

Query: 68  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 127
             FPRILGHEA GVVESVGE+VD + EGD V+P FL DC +CV C+SKK NLCS FP + 
Sbjct: 70  GCFPRILGHEAFGVVESVGEDVDHLKEGDSVVPIFLPDCMDCVDCKSKKSNLCSKFPIQS 129

Query: 128 SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 187
           S  + RD TSRF +  GET+HH++ +SSFSEYTV+D+ +V K+DP +PPNRACLLSCGVS
Sbjct: 130 SLLLHRDDTSRFTNADGETLHHYLYISSFSEYTVVDVVNVTKIDPEIPPNRACLLSCGVS 189

Query: 188 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247
           TGVGAAW+TANVE GSTVVIFGLGS+GLAVAEGARLCGATRIIGV   S+KFEIGK+FGV
Sbjct: 190 TGVGAAWKTANVEPGSTVVIFGLGSVGLAVAEGARLCGATRIIGVGRNSDKFEIGKQFGV 249

Query: 248 TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 307
           TEFVNSK+CGDK VSQ+II+MT+GGADYC ECVGL  +VQEA+ACCRKGWGKTIVLGVD+
Sbjct: 250 TEFVNSKSCGDKPVSQVIIEMTNGGADYCNECVGLGRVVQEAFACCRKGWGKTIVLGVDK 309

Query: 308 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
           P ++L+L+SFEVL S K LMGS FGGLK KSD+   LKRY+DK
Sbjct: 310 PDARLNLNSFEVLQSNKTLMGSFFGGLKPKSDVHTSLKRYLDK 352

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554319|ref|XP_003545495.1| PREDICTED: alcohol dehydrogenase-like 7-like isoform 1 [Glycine max]

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 253/347 (72%), Positives = 295/347 (85%)

Query: 4   EKPSNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKM 63
           +K +  + G+PI+C+AAI   PG PL I+E+IV PP   E R+R+ICTSLCHSDVTFWKM
Sbjct: 3   DKLATTSEGQPIRCKAAICRKPGSPLSIEEIIVAPPMPREARIRVICTSLCHSDVTFWKM 62

Query: 64  KDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAF 123
           +  PA+ PRILGHEA+GVVESVGE+V  V +GDVV+P FL DC EC+ C+S K NLCS F
Sbjct: 63  EVPPAICPRILGHEAVGVVESVGEDVTEVTKGDVVVPIFLPDCGECIDCKSSKSNLCSKF 122

Query: 124 PFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLS 183
           PF++SPWMPR  TSRF DL+G+ IHHF+ VSSFSEYTV+DIAH+ K+DP +PPNRACLLS
Sbjct: 123 PFEVSPWMPRHATSRFTDLKGDIIHHFLFVSSFSEYTVVDIAHLTKIDPAIPPNRACLLS 182

Query: 184 CGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243
           CGVSTGVGAAWRTA VE GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV  EK+E GK
Sbjct: 183 CGVSTGVGAAWRTAGVEPGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVNPEKYETGK 242

Query: 244 RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 303
           +FG+T+FV++    +KSVSQ+II+MT GGADYCFECVG+A+LVQEAYA CRKGWGK IVL
Sbjct: 243 KFGLTDFVHAGESENKSVSQVIIEMTGGGADYCFECVGMATLVQEAYASCRKGWGKAIVL 302

Query: 304 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
           GV++PGS LSLS  EVLHSGK L+G LFGGLK KSD+PILLKRYMDK
Sbjct: 303 GVEKPGSMLSLSCNEVLHSGKSLVGCLFGGLKPKSDVPILLKRYMDK 349

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554321|ref|XP_003545496.1| PREDICTED: alcohol dehydrogenase-like 7-like isoform 2 [Glycine max]

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 254/350 (72%), Positives = 295/350 (84%)

Query: 1   MDIEKPSNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF 60
           M  +  S+   G+PI+C+AAI   PG PL I+E+IV PP   E R+R+ICTSLCHSDVTF
Sbjct: 1   MASQNSSSLCEGQPIRCKAAICRKPGSPLSIEEIIVAPPMPREARIRVICTSLCHSDVTF 60

Query: 61  WKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLC 120
           WKM+  PA+ PRILGHEA+GVVESVGE+V  V +GDVV+P FL DC EC+ C+S K NLC
Sbjct: 61  WKMEVPPAICPRILGHEAVGVVESVGEDVTEVTKGDVVVPIFLPDCGECIDCKSSKSNLC 120

Query: 121 SAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRAC 180
           S FPF++SPWMPR  TSRF DL+G+ IHHF+ VSSFSEYTV+DIAH+ K+DP +PPNRAC
Sbjct: 121 SKFPFEVSPWMPRHATSRFTDLKGDIIHHFLFVSSFSEYTVVDIAHLTKIDPAIPPNRAC 180

Query: 181 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE 240
           LLSCGVSTGVGAAWRTA VE GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV  EK+E
Sbjct: 181 LLSCGVSTGVGAAWRTAGVEPGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVNPEKYE 240

Query: 241 IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKT 300
            GK+FG+T+FV++    +KSVSQ+II+MT GGADYCFECVG+A+LVQEAYA CRKGWGK 
Sbjct: 241 TGKKFGLTDFVHAGESENKSVSQVIIEMTGGGADYCFECVGMATLVQEAYASCRKGWGKA 300

Query: 301 IVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
           IVLGV++PGS LSLS  EVLHSGK L+G LFGGLK KSD+PILLKRYMDK
Sbjct: 301 IVLGVEKPGSMLSLSCNEVLHSGKSLVGCLFGGLKPKSDVPILLKRYMDK 350

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224065707|ref|XP_002301931.1| predicted protein [Populus trichocarpa] gi|222843657|gb|EEE81204.1| predicted protein [Populus trichocarpa]

 Score =  526 bits (1356), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 266/350 (76%), Positives = 308/350 (88%), Gaps = 1/350 (0%)

Query: 1   MDIEKPSNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF 60
           MD EK S + AGKPI C+AA+A  PGEPLVI+E+IV PP+ HEVRVRIICTSLC SDVTF
Sbjct: 1   MDGEKFSVE-AGKPILCKAAVARKPGEPLVIEEIIVAPPSHHEVRVRIICTSLCQSDVTF 59

Query: 61  WKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLC 120
           WK+KD PAVFPRILGHEAIGVVESVGE+VD VVEGDVVIP FL DC +C  C+SKK NLC
Sbjct: 60  WKLKDLPAVFPRILGHEAIGVVESVGEDVDEVVEGDVVIPVFLPDCGDCADCKSKKSNLC 119

Query: 121 SAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRAC 180
           S  PF++SPWMPRD+TSRF +L+GE ++HF++VSSFSEYTV+D AH+VK+DP++PP++AC
Sbjct: 120 SKLPFQVSPWMPRDKTSRFTNLKGEVLYHFLNVSSFSEYTVVDTAHIVKIDPSIPPSKAC 179

Query: 181 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE 240
           LLSCGVSTGVGAAWRTANVE GSTVVIFGLGSIGLAVAEGAR+ GAT+IIGVDV  EKFE
Sbjct: 180 LLSCGVSTGVGAAWRTANVEAGSTVVIFGLGSIGLAVAEGARISGATKIIGVDVNQEKFE 239

Query: 241 IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKT 300
           I K+FGVT+FVN   CGDK VSQ+I +MT GGADYCFECVGL SL+++AYACCRKGWGKT
Sbjct: 240 IAKKFGVTDFVNVGECGDKPVSQVINEMTGGGADYCFECVGLVSLMEQAYACCRKGWGKT 299

Query: 301 IVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
           I+LGV++P S++SL   +VL SGK L G+LFGGLKAKSDIPILLKRYMDK
Sbjct: 300 IILGVEKPESRVSLPCADVLQSGKTLTGALFGGLKAKSDIPILLKRYMDK 349

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359492331|ref|XP_002285917.2| PREDICTED: alcohol dehydrogenase-like 7-like [Vitis vinifera] gi|302141684|emb|CBI18887.3| unnamed protein product [Vitis vinifera]

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 241/343 (70%), Positives = 296/343 (86%)

Query: 8   NKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP 67
           ++T GKPI+CRAA++   GEPLV++EV+V PP + EVR+RIICTSLCHSD+TFWK+K+ P
Sbjct: 15  SQTRGKPIRCRAAVSRKAGEPLVMEEVMVAPPMAGEVRIRIICTSLCHSDLTFWKLKEPP 74

Query: 68  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 127
           A FPRILGHEA+GVVESVGENV  V EGD V+P F+ DC EC+ CRS+K NLCS FPF+I
Sbjct: 75  ACFPRILGHEAVGVVESVGENVTEVAEGDTVLPIFIPDCGECMDCRSEKSNLCSKFPFEI 134

Query: 128 SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 187
           SPW+PR ++SRF DL+GE ++HF++VSSFSEYTV+DI ++ K+ P +PPN+ACL SCGVS
Sbjct: 135 SPWLPRHKSSRFTDLKGEVLYHFLNVSSFSEYTVVDIDNITKISPAIPPNKACLFSCGVS 194

Query: 188 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247
           TGVGAAWRTA VE GSTVVIFGLG+IGLAVAEGARLCGA+RIIGVD   EKF++ K+FGV
Sbjct: 195 TGVGAAWRTAKVEKGSTVVIFGLGAIGLAVAEGARLCGASRIIGVDTNLEKFDVAKKFGV 254

Query: 248 TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 307
           TEFVN +NCGDK VSQ I++MTDGGADYCFECVG ASLVQ+A+A CRKGWGK I++GVD+
Sbjct: 255 TEFVNPRNCGDKPVSQAIVEMTDGGADYCFECVGFASLVQDAFASCRKGWGKAIMVGVDK 314

Query: 308 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
           PG+ L+ SS E+LH GK +MGS++GGLK KS IP+LL+R +DK
Sbjct: 315 PGAMLNFSSVEMLHCGKSVMGSIYGGLKPKSHIPVLLQRLVDK 357

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	362
TAIR|locus:2157627	390	AT5G42250 [Arabidopsis thalian	0.941	0.874	0.687	5.7e-130
TAIR|locus:2009512	386	AT1G22440 [Arabidopsis thalian	0.939	0.880	0.565	3.4e-100
TAIR|locus:2009522	388	AT1G22430 [Arabidopsis thalian	0.933	0.871	0.545	6.4e-99
TAIR|locus:2120663	389	AT4G22110 [Arabidopsis thalian	0.933	0.868	0.554	2e-97
TAIR|locus:2184575	381	AT5G24760 [Arabidopsis thalian	0.911	0.866	0.443	1.2e-74
ZFIN|ZDB-GENE-011003-1	376	adh5 "alcohol dehydrogenase 5"	0.933	0.898	0.428	1.9e-74
TAIR|locus:2035619	394	AT1G32780 [Arabidopsis thalian	0.933	0.857	0.445	7.5e-73
TAIR|locus:2025237	379	ADH1 "alcohol dehydrogenase 1"	0.933	0.891	0.423	1.6e-72
DICTYBASE|DDB_G0281865	379	adh5 "alcohol dehydrogenase, c	0.936	0.894	0.428	6.7e-72
UNIPROTKB|F1S0C1	374	ADH5 "Uncharacterized protein"	0.930	0.901	0.417	7.7e-71

TAIR|locus:2157627 AT5G42250 [Arabidopsis thaliana (taxid:3702)]

 Score = 1275 (453.9 bits), Expect = 5.7e-130, P = 5.7e-130
 Identities = 235/342 (68%), Positives = 280/342 (81%)

Query:     8 NKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP 67
             NK++ KPI+C+AA++   GEPLV++E++V PP   EVR+RIICT+LCHSDVTFWK++  P
Sbjct:    10 NKSSHKPIRCKAAVSRKAGEPLVMEEIMVAPPQPFEVRIRIICTALCHSDVTFWKLQVPP 69

Query:    68 AVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKI 127
             A FPRILGHEAI                   +P F+ DC +CV C+S K NLCS FPFK+
Sbjct:    70 ACFPRILGHEAIGVVESVGENVKEVVEGDTVLPTFMPDCGDCVDCKSHKSNLCSKFPFKV 129

Query:   128 SPWMPR-DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 186
             SPWMPR D +SRF DL GET+ HF++VSSFSEYTVLD+A+VVK+D ++PP+RACLLSCGV
Sbjct:   130 SPWMPRYDNSSRFTDLNGETLFHFLNVSSFSEYTVLDVANVVKIDSSIPPSRACLLSCGV 189

Query:   187 STGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 246
             STGVGAAW TA VE GSTVVIFGLGSIGLAVAEGARLCGA+RIIGVD+   KF++G++FG
Sbjct:   190 STGVGAAWETAKVEKGSTVVIFGLGSIGLAVAEGARLCGASRIIGVDINPTKFQVGQKFG 249

Query:   247 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306
             VTEFVNS  C    VS++I +MTDGGADYCFECVG +SLVQEAYACCR+GWGKTI LGVD
Sbjct:   250 VTEFVNSMTCEKNRVSEVINEMTDGGADYCFECVGSSSLVQEAYACCRQGWGKTITLGVD 309

Query:   307 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYM 348
             +PGSQ+ L SF+VLH GKILMGSLFGGLKAK+ IPILLKRY+
Sbjct:   310 KPGSQICLDSFDVLHHGKILMGSLFGGLKAKTHIPILLKRYL 351

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2009512 AT1G22440 [Arabidopsis thaliana (taxid:3702)]

 Score = 994 (355.0 bits), Expect = 3.4e-100, P = 3.4e-100
 Identities = 194/343 (56%), Positives = 248/343 (72%)

Query:    10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-A 68
             T GKPI+C+AAI    GEPLVI+E+ VDPP ++EVR++I+CTSLCH+DVTFWK+   P A
Sbjct:     7 TEGKPIRCKAAILRKAGEPLVIEEIQVDPPQAYEVRIKILCTSLCHTDVTFWKLDSGPLA 66

Query:    69 VFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFK-I 127
              FPRILGHEA+                   +P F   C EC  C S K N C+ +    +
Sbjct:    67 RFPRILGHEAVGVVESIGEKVDGFKQGDVVLPVFHPQCEECKECISPKSNWCTKYTNDYL 126

Query:   128 SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 187
             S       TSRFKD RGE IHHF+ VSSF+EYTV+DIAH+VK+ P +P + A LLSC V+
Sbjct:   127 SNTRRYGMTSRFKDSRGEDIHHFIFVSSFTEYTVVDIAHLVKISPEIPVDIAALLSCSVA 186

Query:   188 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247
             TG+GAAW+ A+VE GSTVVIFGLG++GLAVAEG RL GA +IIGVD+   KFEIGKRFG+
Sbjct:   187 TGLGAAWKVADVEEGSTVVIFGLGAVGLAVAEGVRLRGAAKIIGVDLNPAKFEIGKRFGI 246

Query:   248 TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 307
             T+FVN   CG+K++S++I +MTD GADY FEC+GLASL++EA+   R G GKTIVLG++Q
Sbjct:   247 TDFVNPALCGEKTISEVIREMTDVGADYSFECIGLASLMEEAFKSTRPGSGKTIVLGMEQ 306

Query:   308 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
                 +SL S+++L  G+ + G+LFGGLK K DIPIL+ RY+ K
Sbjct:   307 KALPISLGSYDLLR-GRTVCGTLFGGLKPKLDIPILVDRYLKK 348

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010359 "regulation of anion channel activity" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2009522 AT1G22430 [Arabidopsis thaliana (taxid:3702)]

 Score = 982 (350.7 bits), Expect = 6.4e-99, P = 6.4e-99
 Identities = 186/341 (54%), Positives = 245/341 (71%)

Query:    12 GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVF 70
             GKPI C+AAI    GE LVI+++ VDPP ++EVR++I+CTSLCH+D+TFWK+   P + F
Sbjct:    11 GKPITCKAAICRKAGEALVIEDIHVDPPQAYEVRIKILCTSLCHTDLTFWKLSFGPISRF 70

Query:    71 PRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFK-ISP 129
             PRILGHEA+                   +P F   C EC  C+S K N C  +    IS 
Sbjct:    71 PRILGHEAVGVVESIGENVDGFKQGDVVLPVFHPYCEECKDCKSSKTNWCDRYAEDFISN 130

Query:   130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
                    SRFKD  GE IHHF+ VSSFSEYTV+DIAH+VK+ P +P ++A LLSCGVSTG
Sbjct:   131 TRRYGMASRFKDSSGEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDKAALLSCGVSTG 190

Query:   190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
             +GAAW+ ANVE GST+ IFGLG++GLAVAEGARL GA +IIG+D  S+KFE+GK+FG T+
Sbjct:   191 IGAAWKVANVEEGSTIAIFGLGAVGLAVAEGARLRGAAKIIGIDTNSDKFELGKKFGFTD 250

Query:   250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
             F+N   CG+K +S++I +MT+GG DY FECVGLASL+ EA+   R G GKT++LG+++  
Sbjct:   251 FINPTLCGEKKISEVIKEMTEGGVDYSFECVGLASLLNEAFISTRTGTGKTVMLGMEKHA 310

Query:   310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             + +SL SF++L  G+++ GSLFGGLK+K DIPIL+  Y+ K
Sbjct:   311 APISLGSFDLLR-GRVICGSLFGGLKSKLDIPILVDHYLKK 350

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2120663 AT4G22110 [Arabidopsis thaliana (taxid:3702)]

 Score = 968 (345.8 bits), Expect = 2.0e-97, P = 2.0e-97
 Identities = 189/341 (55%), Positives = 245/341 (71%)

Query:    12 GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVF 70
             GKPI+C+AA++  PGE LVI+E+ VDPP ++EVR++IICTSLCH+DV+F K+   P A F
Sbjct:    12 GKPIRCKAAVSRKPGEALVIEEIHVDPPQAYEVRIKIICTSLCHTDVSFSKIDSGPLARF 71

Query:    71 PRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFK-ISP 129
             PRILGHEA+                   +P F   C EC  C+S K N C+ F    +S 
Sbjct:    72 PRILGHEAVGVIESIGEHVNGFQQGDVVLPVFHPHCEECRDCKSSKSNWCARFADDFLSN 131

Query:   130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
                   TSRFKD  GE I+HF+ VSSFSEYTV+DIAH+VK+ P +P ++A LLSCGVSTG
Sbjct:   132 TRRYGMTSRFKDSFGEDIYHFLFVSSFSEYTVVDIAHLVKISPDIPVDKAALLSCGVSTG 191

Query:   190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
             +GAAW+ ANVE GSTV +FGLG++GLAV EGARL GA +IIGVD+  EKFE+GK+FG T+
Sbjct:   192 IGAAWKVANVEKGSTVAVFGLGAVGLAVGEGARLRGAGKIIGVDLNPEKFELGKKFGFTD 251

Query:   250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
             F+NS  CG+  +S++I +MT GG DY FECVGL SL+ EA++  R G GKT+VLG+D+  
Sbjct:   252 FINSTLCGENKISEVIKEMTGGGVDYSFECVGLPSLLTEAFSSTRTGSGKTVVLGIDKHL 311

Query:   310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             + +SL SF++L  G+ + GSLFGGLK K DIPIL+  Y+ K
Sbjct:   312 TPVSLGSFDLLR-GRHVCGSLFGGLKPKLDIPILVDHYLKK 351

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2184575 AT5G24760 [Arabidopsis thaliana (taxid:3702)]

 Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
 Identities = 149/336 (44%), Positives = 211/336 (62%)

Query:    15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL 74
             I C AA+A   GEPLV++EV V PP   E+R++++CTSLC SD++ W+ +   ++ PRI 
Sbjct:    14 ITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWESQ---SLLPRIF 70

Query:    75 GHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
             GHEA                    +  F  +C  C  C S K N+C     +    M  D
Sbjct:    71 GHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQVLGMERKGLMHSD 130

Query:   135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194
             Q +RF  ++G+ ++H+ +VSSFSEYTV+     VKVDP  P ++ CLLSCGV+ G+GAAW
Sbjct:   131 QKTRFS-IKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAW 189

Query:   195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254
               A+V+ GS+VVIFGLG++GL+VA+GA+L GA +I+GVD+   K E  K FGVT+F+NS 
Sbjct:   190 NVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKAEQAKTFGVTDFINSN 249

Query:   255 NCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSL 314
             +  +  + Q+I  MT GGAD+ FECVG   +   A   C  GWG T+ LGV +   ++S 
Sbjct:   250 DLSEP-IPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLGVPKAKPEVS- 307

Query:   315 SSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             + + +  SGK L G+LFGG K KSD+P L+ +YM+K
Sbjct:   308 AHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNK 343

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

ZFIN|ZDB-GENE-011003-1 adh5 "alcohol dehydrogenase 5" [Danio rerio (taxid:7955)]

 Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
 Identities = 146/341 (42%), Positives = 206/341 (60%)

Query:    10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
             T GK I+C+AA+A   G+PL I+EV V PP +HEVRV+I  T +CH+D       D   +
Sbjct:     3 TTGKVIKCKAAVAWEAGKPLTIEEVEVAPPKAHEVRVKIHATGVCHTDAYTLSGSDPEGL 62

Query:    70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
             FP ILGHE                     IP ++  C EC  C++ K NLC         
Sbjct:    63 FPVILGHEGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQGQ 122

Query:   130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +  D TSRF   +G+ + HF+  S+FSEYTV+    + KVD   P ++ CLL CG+STG
Sbjct:   123 GLMPDNTSRFT-CKGKQLFHFMGTSTFSEYTVVAEISLAKVDEHAPLDKVCLLGCGISTG 181

Query:   190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
              GAA  TA VE GST  +FGLG++GLAV  G +  GATRIIG+DV  +KFEI K+FG TE
Sbjct:   182 YGAAINTAKVEAGSTCAVFGLGAVGLAVVMGCKSAGATRIIGIDVNPDKFEIAKKFGATE 241

Query:   250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
             FVN K+   K + ++++++TDGG DY FEC+G   +++ A   C KGWG ++++GV   G
Sbjct:   242 FVNPKD-HSKPIQEVLVELTDGGVDYSFECIGNVGIMRAALEACHKGWGTSVIIGVAGAG 300

Query:   310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
              ++S   F+++ +G+   G+ FGG K+   +P L+  YM+K
Sbjct:   301 QEISTRPFQLV-TGRTWKGTAFGGWKSVESVPKLVNDYMNK 340

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2035619 AT1G32780 [Arabidopsis thaliana (taxid:3702)]

 Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
 Identities = 156/350 (44%), Positives = 211/350 (60%)

Query:     9 KTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDFP 67
             +T GK I C+AA+   P  PLVI E+ VDPP   EVRV+I+ +S+CH+D+  W    +  
Sbjct:     3 ETQGKVITCKAAVVWGPKVPLVIQEICVDPPQKMEVRVKILYSSICHTDLGCWNGTNEAE 62

Query:    68 AVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAF---P 124
               FPRILGHEA+                   IP F  +C EC  C+ ++ NLC  +   P
Sbjct:    63 RAFPRILGHEAVGIVESVGEGVKDVKEGDYVIPTFNGECGECKVCKREESNLCERYHVDP 122

Query:   125 FK---ISPWMPRDQTSRFKD---LRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR 178
              K   ++    R  T+  KD    + + I+HF++ S+F+EYTVLD A VVK+DP  P  +
Sbjct:   123 MKRVMVNDGGTRFSTTINKDGGSSQSQPIYHFLNTSTFTEYTVLDSACVVKIDPNSPLKQ 182

Query:   179 ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK 238
               LLSCGVSTGVGAAW  ANV+ G +  +FGLGS+GLAVAEGAR  GA+RIIGVD  + K
Sbjct:   183 MSLLSCGVSTGVGAAWNIANVKEGKSTAVFGLGSVGLAVAEGARARGASRIIGVDANASK 242

Query:   239 FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWG 298
             FE GK  GVT+F+N K+   K V Q+I ++T GG DY FEC G   +++EA+     GWG
Sbjct:   243 FEKGKLMGVTDFINPKDL-TKPVHQMIREITGGGVDYSFECTGNVDVLREAFLSTHVGWG 301

Query:   299 KTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYM 348
              T+++G+      L L   E L  G+ + GS+FGG K KS +P   ++ M
Sbjct:   302 STVLVGIYPTPRTLPLHPME-LFDGRRITGSVFGGFKPKSQLPNFAQQCM 350

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2025237 ADH1 "alcohol dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
 Identities = 145/342 (42%), Positives = 204/342 (59%)

Query:    10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
             T G+ I+C+AA+A   G+PLVI+EV V PP  HEVR++I+ TSLCH+DV FW+ K    +
Sbjct:     3 TTGQIIRCKAAVAWEAGKPLVIEEVEVAPPQKHEVRIKILFTSLCHTDVYFWEAKGQTPL 62

Query:    70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
             FPRI GHEA                    +P F  +C EC  C S++ N+C         
Sbjct:    63 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESNMCDLLRINTER 122

Query:   130 W-MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVST 188
               M  D  SRF  + G+ I+HF+  S+FSEYTV+    V K++P  P ++ C++SCG+ST
Sbjct:   123 GGMIHDGESRFS-INGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVSCGLST 181

Query:   189 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 248
             G+GA    A  + G +V IFGLG++GL  AEGAR+ GA+RIIGVD  S++F+  K FGVT
Sbjct:   182 GLGATLNVAKPKKGQSVAIFGLGAVGLGAAEGARIAGASRIIGVDFNSKRFDQAKEFGVT 241

Query:   249 EFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 308
             E VN K+  DK + Q+I +MTDGG D   EC G    + +A+ C   GWG  +++GV   
Sbjct:   242 ECVNPKD-HDKPIQQVIAEMTDGGVDRSVECTGSVQAMIQAFECVHDGWGVAVLVGVPSK 300

Query:   309 GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
                        L+  + L G+ FG  K K+DIP ++++YM+K
Sbjct:   301 DDAFKTHPMNFLNE-RTLKGTFFGNYKPKTDIPGVVEKYMNK 341

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0045333 "cellular respiration" evidence=TAS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006970 "response to osmotic stress" evidence=IGI

GO:0001666 "response to hypoxia" evidence=IEP;RCA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:0005829 "cytosol" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS;IMP

DICTYBASE|DDB_G0281865 adh5 "alcohol dehydrogenase, class 3" [Dictyostelium discoideum (taxid:44689)]

 Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
 Identities = 147/343 (42%), Positives = 209/343 (60%)

Query:    10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
             T GK I C+AA+A    +PLVI+++ V PP   EVR++I+ T +CH+D       D   +
Sbjct:     3 TEGKVITCKAAVAWEAKKPLVIEDIEVQPPQKGEVRIKILYTGVCHTDSYTLSGSDPEGI 62

Query:    70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
             FP ILGHE                     IP ++ +C  C  C S K NLCS        
Sbjct:    63 FPCILGHEGGGIVESIGEGVTSVKVGDHVIPLYIPECGTCKFCTSNKTNLCSKIRITQGK 122

Query:   130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
                 D T+RFK  +G+ I HF+  S+FS+YTVL       V    P ++ CLL CG++TG
Sbjct:   123 GQMPDGTTRFK-CKGKEIFHFMGTSTFSQYTVLPEISCCVVREDAPLDKVCLLGCGITTG 181

Query:   190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
              GAA  TA VE GSTV IFGLG++GL+VA+GA  CGA RIIG+D    KF  GK FG TE
Sbjct:   182 FGAAKITAKVEEGSTVAIFGLGAVGLSVAQGAVDCGAKRIIGIDNNETKFGPGKDFGCTE 241

Query:   250 FVN-SKNCGD-KSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 307
             F+N SK+  + K++ Q ++D+TDGG DY FEC+G  ++++ A  CC KGWG + ++GV  
Sbjct:   242 FINPSKDLPEGKTIQQHLVDITDGGVDYSFECIGNVNVMRAALECCHKGWGVSTIVGVAP 301

Query:   308 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
              G+++S   F+++ +G++  GS FGG+K++S +P ++ +YMDK
Sbjct:   302 AGAEISTRPFQLV-TGRVWKGSAFGGVKSRSQLPSIIDKYMDK 343

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|F1S0C1 ADH5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
 Identities = 142/340 (41%), Positives = 202/340 (59%)

Query:    11 AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF 70
             A + I+C+AA+A   G+PL I+E+ V PP +HEVR++II T++CH+D       D    F
Sbjct:     2 ANQVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSF 61

Query:    71 PRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
             P ILGHE                     IP ++  C EC  C + K NLC          
Sbjct:    62 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 121

Query:   131 MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGV 190
             +  D TSRF   +G+TI H++  S+FSEYTV+    V K+DP  P ++ CLL CGVSTG 
Sbjct:   122 LMPDGTSRFT-CKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGY 180

Query:   191 GAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250
             GAA  TA VE GST  +FGLG +GLAV  G ++ GA+RIIGVD+  +KF   K FG +E 
Sbjct:   181 GAAVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGASEC 240

Query:   251 VNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS 310
             +N ++   K + +++I+MTDGG DY FEC+G   +++ A   C KGWG ++V+GV   G 
Sbjct:   241 INPQDFS-KPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGE 299

Query:   311 QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             +++   F+++ +G+   G+ FGG K+   IP L+  YM K
Sbjct:   300 EIATRPFQLV-TGRTWKGTAFGGWKSVESIPKLVSEYMSK 338

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0051775 "response to redox state" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P19854	ADHX_HORSE	1, ., 1, ., 1, ., 2, 8, 4	0.4523	0.9198	0.8903	yes	no
P12711	ADHX_RAT	1, ., 1, ., 1, ., 2, 8, 4	0.4441	0.9309	0.9010	yes	no
P11766	ADHX_HUMAN	1, ., 1, ., 1, ., 2, 8, 4	0.4411	0.9309	0.9010	yes	no
P46415	ADHX_DROME	1, ., 1, ., 1, ., 2, 8, 4	0.4269	0.9364	0.8944	yes	no
Q3ZC42	ADHX_BOVIN	1, ., 1, ., 1, ., 2, 8, 4	0.4411	0.9309	0.9010	yes	no
P32771	FADH_YEAST	1, ., 1, ., 1, ., -	0.4360	0.9419	0.8834	yes	no
Q9FH04	ADHL7_ARATH	1, ., 1, ., 1, ., 1	0.7339	0.9419	0.8743	yes	no
P28474	ADHX_MOUSE	1, ., 1, ., 1, ., 2, 8, 4	0.4323	0.9309	0.9010	yes	no
Q54TC2	ADHX_DICDI	1, ., 1, ., 1, ., 2, 8, 4	0.4548	0.9558	0.9129	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.976
4th Layer	1.1.1.1	0.991

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	362
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	0.0
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	1e-143
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	1e-137
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	1e-135
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	1e-122
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	1e-117
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	1e-113
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	1e-112
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	1e-110
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	1e-109
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	5e-79
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	3e-72
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	2e-71
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	3e-55
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	1e-52
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	2e-48
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	1e-45
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	6e-45
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	2e-41
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	1e-38
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	2e-38
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	3e-38
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	5e-38
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	2e-37
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	7e-36
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	2e-35
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	7e-34
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	2e-33
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	3e-33
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	7e-33
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	7e-32
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	3e-31
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	2e-30
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	2e-30
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	1e-29
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	5e-29
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	1e-28
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	4e-26
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	4e-26
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	5e-26
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	2e-25
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	4e-24
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	8e-24
cd05281	341	cd05281, TDH, Threonine dehydrogenase	3e-23
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	4e-23
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	1e-22
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	2e-22
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	3e-22
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	8e-21
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	1e-20
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	3e-20
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	4e-20
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	6e-20
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	6e-20
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	9e-20
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	1e-18
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	2e-18
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	8e-18
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	1e-17
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	4e-17
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	7e-17
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	3e-16
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	4e-16
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	5e-15
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	7e-13
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	1e-12
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	2e-12
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	2e-12
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	4e-12
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	2e-11
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	3e-11
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	3e-10
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	5e-10
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	8e-10
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	8e-10
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	1e-09
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	2e-09
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	2e-09
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	3e-09
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	3e-08
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	3e-08
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	9e-08
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	1e-07
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	3e-07
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	3e-07
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	4e-07
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	5e-07
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	5e-07
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	8e-05
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	2e-04
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	6e-04
cd05300	313	cd05300, 2-Hacid_dh_1, Putative D-isomer specific	6e-04
cd08238	410	cd08238, sorbose_phosphate_red, L-sorbose-1-phosph	7e-04
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	0.001
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	0.001
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	0.002
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	0.002
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	0.002

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score =  508 bits (1310), Expect = 0.0
 Identities = 175/337 (51%), Positives = 228/337 (67%), Gaps = 4/337 (1%)

Query: 15  IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL 74
           I C+AA+A   G+PLVI+EV V PP + EVR++I+ TSLCH+DV FW+ K    +FPRIL
Sbjct: 1   ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRIL 60

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW-MPR 133
           GHEA G+VESVGE V  +  GD V+P F  +C EC  C+S+K N+C           M  
Sbjct: 61  GHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMIN 120

Query: 134 DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAA 193
           D  SRF    G+ I+HFV  S+FSEYTV+ +  V K++P  P ++ CLLSCGVSTG+GAA
Sbjct: 121 DGKSRFSI-NGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAA 179

Query: 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253
           W  A V+ GSTV IFGLG++GLAVAEGAR+ GA+RIIGVD+   KFE  K+FGVTEFVN 
Sbjct: 180 WNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNP 239

Query: 254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLS 313
           K+  DK V ++I +MT GG DY FEC G    +  A+ C   GWG T++LGV    +  S
Sbjct: 240 KDH-DKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFS 298

Query: 314 LSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
                +L+ G+ L G+LFGG K K+D+P L+++YM K
Sbjct: 299 THPMNLLN-GRTLKGTLFGGYKPKTDLPNLVEKYMKK 334

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  410 bits (1057), Expect = e-143
 Identities = 167/336 (49%), Positives = 230/336 (68%), Gaps = 6/336 (1%)

Query: 15  IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL 74
           I+C+AA+A   G+PLVI+E+ V PP ++EVR++++ TS+CH+D+   +      +FP IL
Sbjct: 1   IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGF-KATLFPVIL 59

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           GHE  G+VESVGE V  +  GD VIP F+  C EC  CRS K NLC  +    S  MP D
Sbjct: 60  GHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMP-D 118

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194
            TSRF   +G+ I+HF+  S+FS+YTV+D  +V K+DP  P    CLL CG STG GAAW
Sbjct: 119 GTSRFT-CKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAW 177

Query: 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254
            TA VE GSTV +FGLG++GL+   GA++ GA+RIIGVD+  +KFE  K FG T+F+N K
Sbjct: 178 NTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPK 237

Query: 255 NCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSL 314
           +  DK VS++I +MT GG DY FEC G A L+ EA    + GWG ++V+GV  PG++LS+
Sbjct: 238 DS-DKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGV-PPGAELSI 295

Query: 315 SSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             F+++  G+   GS FGG K++SD+P L+ +YM+K
Sbjct: 296 RPFQLI-LGRTWKGSFFGGFKSRSDVPKLVSKYMNK 330

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score =  395 bits (1016), Expect = e-137
 Identities = 160/342 (46%), Positives = 226/342 (66%), Gaps = 15/342 (4%)

Query: 15  IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL 74
           I C+AA+A   G+PL I+EV V PP + EVR++I+ T +CH+D       D   +FP IL
Sbjct: 1   ITCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVIL 60

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW---- 130
           GHE  G+VESVGE V  V  GD VIP +  +C EC  C+S K NLC     KI       
Sbjct: 61  GHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQ----KIRATQGKG 116

Query: 131 -MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVL-DIAHVVKVDPTVPPNRACLLSCGVST 188
            MP D TSRF   +G+ I+HF+  S+FSEYTV+ +I+ V K++P  P ++ CLL CGV+T
Sbjct: 117 LMP-DGTSRFS-CKGKPIYHFMGTSTFSEYTVVAEIS-VAKINPEAPLDKVCLLGCGVTT 173

Query: 189 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 248
           G GA   TA VE GSTV +FGLG++GLAV +GA+  GA+RIIG+D+  +KFE+ K+FG T
Sbjct: 174 GYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGAT 233

Query: 249 EFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 308
           + VN K+  DK + Q++++MTDGG DY FEC+G   +++ A   C KGWG ++++GV   
Sbjct: 234 DCVNPKDH-DKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAA 292

Query: 309 GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
           G ++S   F+ L +G++  G+ FGG K++S +P L++ YM  
Sbjct: 293 GQEISTRPFQ-LVTGRVWKGTAFGGWKSRSQVPKLVEDYMKG 333

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score =  391 bits (1005), Expect = e-135
 Identities = 176/344 (51%), Positives = 231/344 (67%), Gaps = 9/344 (2%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDFPA 68
           T GK I C+AA+A  PGEPLV++E+ VDPP   EVR++I+ TS+CH+D++ WK   +   
Sbjct: 4   TQGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQR 63

Query: 69  VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAF---PF 125
            +PRILGHEA G+VESVGE V+ +  GD VIP F  +C +C  C+  K NLC  +   PF
Sbjct: 64  AYPRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPF 123

Query: 126 KISPWMPRDQTSRFKDLR-GETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC 184
           K    M  D  +RF     G+ I+HF++ S+F+EYTVLD A VVK+DP  P  +  LLSC
Sbjct: 124 KSV--MVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSC 181

Query: 185 GVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244
           GVSTGVGAAW TANV+ GS+V IFGLG++GLAVAEGAR  GA++IIGVD+  EKFE GK 
Sbjct: 182 GVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKE 241

Query: 245 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 304
            G+T+F+N K+  DK V + I +MT GG DY FEC G   +++EA+     GWG T++LG
Sbjct: 242 MGITDFINPKDS-DKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLG 300

Query: 305 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYM 348
           +      L L   E L  G+ + GS+FG  K KS +P L K+ M
Sbjct: 301 IHPTPKMLPLHPME-LFDGRSITGSVFGDFKGKSQLPNLAKQCM 343

Length = 381

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score =  356 bits (914), Expect = e-122
 Identities = 162/336 (48%), Positives = 224/336 (66%), Gaps = 6/336 (1%)

Query: 15  IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL 74
           I CRAA+A   GE LV++EV V PP   E+R++++ TSLC SD++ W+ +   A+FPRI 
Sbjct: 11  ITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ---ALFPRIF 67

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           GHEA G+VES+GE V    +GD V+  F  +C  C  C S K N+C     +    M  D
Sbjct: 68  GHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSD 127

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194
           Q +RF  ++G+ ++H+ +VSSFSEYTV+     VKVDP  P ++ CLLSCGV+ G+GAAW
Sbjct: 128 QKTRFS-IKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAW 186

Query: 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254
             A+V  GS+VVIFGLG++GL+VA+GA+L GA++IIGVD+  EK E  K FGVT+F+N  
Sbjct: 187 NVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPN 246

Query: 255 NCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSL 314
           +   + + Q+I  MT GGADY FECVG   +   A   C  GWG T+ LGV +   ++S 
Sbjct: 247 DL-SEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVS- 304

Query: 315 SSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
           + + +  SG+ L GSLFGG K KSD+P L+ +YM+K
Sbjct: 305 AHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNK 340

Length = 378

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score =  345 bits (886), Expect = e-117
 Identities = 145/341 (42%), Positives = 206/341 (60%), Gaps = 4/341 (1%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+   P +P  I+E+ V PP +HEVR++I+ T +C SD      K     
Sbjct: 1   TAGKVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGK-LVTP 59

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FP ILGHEA G+VESVGE V  V  GD VIP F+  C +C  C + + NLC         
Sbjct: 60  FPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQ 119

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
            + +D TSRF   +G+ IHHF+  S+FSEYTV+D   V K+D   P  + CL+ CG STG
Sbjct: 120 GLMQDGTSRFT-CKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTG 178

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            GAA  TA V  GST  +FGLG +GL+   G +  GA+RII VD+  +KF   K  G TE
Sbjct: 179 YGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATE 238

Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            +N ++   K + +++ +MTDGG D+ FE +G    ++ A A C +G+G ++++GV    
Sbjct: 239 CINPQDY-KKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSS 297

Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             LS++   +L +G+   G++FGG K+K  +P L+  YM K
Sbjct: 298 QNLSINPMLLL-TGRTWKGAVFGGWKSKDSVPKLVADYMAK 337

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score =  334 bits (860), Expect = e-113
 Identities = 149/335 (44%), Positives = 205/335 (61%), Gaps = 6/335 (1%)

Query: 15  IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL 74
           ++ RAA+A   G+PL I+EV +DPP + EV VRI  T +CH+D       D P  FP +L
Sbjct: 1   MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDD-PEGFPAVL 59

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           GHE  G+VE+VGE V  V  GD VI  F  +C +C  C S K NLC A           D
Sbjct: 60  GHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPD 119

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194
            T+R     G  ++H++  S+F+EYTV+    +VK+DP  P  +ACLL CGV+TG+GA  
Sbjct: 120 GTTRLSG-NGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVV 178

Query: 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254
            TA VE G TV +FGLG +GLA  +GA+  GA RII VD+  EK E+ K+FG T FVN K
Sbjct: 179 NTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK 238

Query: 255 NCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSL 314
              D  V + I+++TDGGADY FECVG   ++++A     +  G ++++GV   G ++S 
Sbjct: 239 EVDD--VVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQEIST 295

Query: 315 SSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMD 349
             F+ L +G++  GS FGG + +SDIP L+  YM 
Sbjct: 296 RPFQ-LVTGRVWKGSAFGGARPRSDIPRLVDLYMA 329

Length = 366

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score =  330 bits (847), Expect = e-112
 Identities = 139/335 (41%), Positives = 205/335 (61%), Gaps = 6/335 (1%)

Query: 17  CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGH 76
           C+AA+    G+PL I+E+ V PP + EVR++++ T +CH+D+     K  P   P ILGH
Sbjct: 1   CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKL-PTPLPVILGH 59

Query: 77  EAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCS-AFPFKISPWMPRDQ 135
           E  G+VES+G  V  +  GD VIP F   C +C  C + + NLCS +        M  D 
Sbjct: 60  EGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMS-DG 118

Query: 136 TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR 195
           TSRF   +G+ IHHF+  S+F+EYTV+    + K+DP  P  + CL+ CG STG GAA  
Sbjct: 119 TSRFT-CKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVN 177

Query: 196 TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255
           TA V  GST  +FGLG +GL+V  G +  GA+RII VD+  +KFE  K+ G TE +N ++
Sbjct: 178 TAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRD 237

Query: 256 CGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLS 315
             DK + +++ +MTDGG DY FE +G A  +++A    R G G ++V+GV   G++ +L 
Sbjct: 238 -QDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLD 296

Query: 316 SFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             ++L +G+ + G++FGG K+K  +P L+  Y  K
Sbjct: 297 PNDLL-TGRTIKGTVFGGWKSKDSVPKLVALYRQK 330

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  325 bits (835), Expect = e-110
 Identities = 145/333 (43%), Positives = 189/333 (56%), Gaps = 8/333 (2%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           RAA+    G+PL I+EV +D P   EV VRI    LCHSD+      D PA  P +LGHE
Sbjct: 2   RAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVT-GDLPAPLPAVLGHE 60

Query: 78  AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTS 137
             GVVE VG  V GV  GD V+  ++  C  C  C   + NLC      I      D T 
Sbjct: 61  GAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDL-GAGILGGQLPDGTR 119

Query: 138 RFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA 197
           RF    GE +     + +F+EYTV+  A VVK+D  +P +RA LL CGV+TGVGA   TA
Sbjct: 120 RF-TADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTA 178

Query: 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG 257
            V  G TV + G G +GL   +GAR+ GA+RII VD + EK E+ +RFG T  VN+    
Sbjct: 179 RVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNA---S 235

Query: 258 DKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS 316
           +    + + D+TDG GADY FE VG A+ +++A A  RKG G  +V+G+  PG  +SL +
Sbjct: 236 EDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPA 294

Query: 317 FEVLHSGKILMGSLFGGLKAKSDIPILLKRYMD 349
            E+  S K L GSL+G    + DIP LL  Y  
Sbjct: 295 LELFLSEKRLQGSLYGSANPRRDIPRLLDLYRA 327

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score =  324 bits (831), Expect = e-109
 Identities = 151/331 (45%), Positives = 215/331 (64%), Gaps = 3/331 (0%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           RAA+A A G+PL I+EV V+ P   EV VRI+ T +CH+D       D   VFP ILGHE
Sbjct: 3   RAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHE 62

Query: 78  AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTS 137
             G+VE+VGE V  V  GD VIP + A+C EC  C S K NLC A        +  D TS
Sbjct: 63  GAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTS 122

Query: 138 RFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA 197
           RF    G+ I+H++  S+FSEYTV+    + K++P  P    CLL CGV+TG+GA   TA
Sbjct: 123 RFS-KDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTA 181

Query: 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG 257
            VE G TV +FGLG IGL+V +GAR+  A+RII +D+   KFE+ K+ G T+ VN  +  
Sbjct: 182 KVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPND-Y 240

Query: 258 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF 317
           DK + ++I+++TDGG DY FEC+G  ++++ A  CC KGWG++I++GV   G ++S   F
Sbjct: 241 DKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPF 300

Query: 318 EVLHSGKILMGSLFGGLKAKSDIPILLKRYM 348
           + L +G++  GS FGG+K ++++P ++++YM
Sbjct: 301 Q-LVTGRVWRGSAFGGVKGRTELPGIVEQYM 330

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score =  246 bits (630), Expect = 5e-79
 Identities = 115/335 (34%), Positives = 176/335 (52%), Gaps = 9/335 (2%)

Query: 15  IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL 74
           ++  AA+   PG P V+++V +D P   EV VRI+ T +CH+D+   +    P   P +L
Sbjct: 1   MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVV-RDGGLPTPLPAVL 59

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLC-SAFPFKISPWMPR 133
           GHE  GVVE+VG  V G+  GD V+  F A C EC  C S     C + FP   S   P 
Sbjct: 60  GHEGAGVVEAVGSAVTGLKPGDHVVLSF-ASCGECANCLSGHPAYCENFFPLNFSGRRP- 117

Query: 134 DQTSRFKDLRGETIH-HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGA 192
           D ++      G  +H HF   SSF+ Y V+   +VVKVD  VP      L CG+ TG GA
Sbjct: 118 DGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGA 177

Query: 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252
                    GS++ +FG G++GLA    A++ G T II VD++  + E+ K  G T  +N
Sbjct: 178 VLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVIN 237

Query: 253 SKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL 312
            K   ++ +   I ++T GG DY  +  G+ +++++A        G   ++G   PG+++
Sbjct: 238 PK---EEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEV 293

Query: 313 SLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRY 347
           +L   ++L SGK + G + G    +  IP L++ Y
Sbjct: 294 TLDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELY 328

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score =  229 bits (585), Expect = 3e-72
 Identities = 123/342 (35%), Positives = 173/342 (50%), Gaps = 18/342 (5%)

Query: 18  RAAIATAPG--------EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           RAA+    G         PLVI+EV +DPP   EV V+I    LCHSD++     D P  
Sbjct: 2   RAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVIN-GDRPRP 60

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P  LGHEA GVV  VGE V  +  GD V+  F+  C  C  C   +  LC         
Sbjct: 61  LPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGA 120

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
                   R + LRG  I+H + VS+F+EY V+    VVK+D  VP   A L  C V TG
Sbjct: 121 GTLLSGGRRLR-LRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTG 179

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
           VGA   TA V  G +V + GLG +GL+   GA   GA++++ VD+  +K  + +  G T 
Sbjct: 180 VGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATA 239

Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            VN+   GD +  + + ++T GG DY FE  G    ++ AY   R+G G T+  G+  P 
Sbjct: 240 TVNA---GDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPE 295

Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKW 351
           ++LS+ +  ++   + L GS  G    + DIP    RY+  +
Sbjct: 296 ARLSVPALSLVAEERTLKGSYMGSCVPRRDIP----RYLALY 333

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score =  226 bits (579), Expect = 2e-71
 Identities = 120/337 (35%), Positives = 181/337 (53%), Gaps = 16/337 (4%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK--DFPA-VFPRIL 74
           +AA+   PG+P  ++E+ +D P + EV V+++ + LCHSD     +   D P   +P + 
Sbjct: 3   KAAVLWGPGQPWEVEEIELDDPKAGEVLVKLVASGLCHSD---EHLVTGDLPMPRYPILG 59

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           GHE  GVV  VG  V GV  GD V+  F+  C  C  C +   NLC      ++     D
Sbjct: 60  GHEGAGVVTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDLGAALLTGSQISD 119

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194
            T RF    G+ +     + +FSEYTV+  A VVK+D  +P ++ACL+ CGV TG G+A 
Sbjct: 120 GTYRFH-ADGQDVGQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACLVGCGVPTGWGSAV 178

Query: 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254
             A+V  G TVV+ G+G +G+   +GA + GA ++I VD +  K E   +FG T    S 
Sbjct: 179 NIADVRPGDTVVVMGIGGVGINAVQGAAVAGARKVIAVDPVEFKREQALKFGATHAFASM 238

Query: 255 NCGDKSVSQIIIDMTDG-GADYCFECVGLA--SLVQEAYACCRKGWGKTIVLGVDQPG-S 310
               +   Q++ ++T+G GAD     VG      + EA +  RKG G+ +V G+      
Sbjct: 239 ----EEAVQLVRELTNGQGADKTIITVGEVDGEHIAEALSATRKG-GRVVVTGLGPMADV 293

Query: 311 QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRY 347
            + ++ FE+    K L G+LFGG   ++DIP LL+ Y
Sbjct: 294 DVKVNLFELTLLQKELQGTLFGGANPRADIPRLLELY 330

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score =  184 bits (469), Expect = 3e-55
 Identities = 110/332 (33%), Positives = 163/332 (49%), Gaps = 15/332 (4%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           R  IA + G P+ ++ ++V  P   EV V I    +CH+D+ + +       FP +LGHE
Sbjct: 3   RGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHY-REGGINDEFPFLLGHE 61

Query: 78  AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTS 137
           A GVVE+VGE V  V  GD V+ ++ A C +C  C+  +   C         +   + T 
Sbjct: 62  AAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYC---------FDTHNATQ 112

Query: 138 RFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA 197
           +     G  +   + + +F+E T++      KVDP   P  A LL CGV  G+GAA  T 
Sbjct: 113 KMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTG 172

Query: 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG 257
            V+ G +V + G G +G A   GA L GA++II VD+   K E  + FG T  VNS   G
Sbjct: 173 GVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSS--G 230

Query: 258 DKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS 316
              V + I  +T G GAD   + VG     ++A+   R   G  +++GV  P   L L  
Sbjct: 231 TDPV-EAIRALTGGFGADVVIDAVGRPETYKQAFY-ARDLAGTVVLVGVPTPDMTLELPL 288

Query: 317 FEVLHSGKILMGSLFGGLKAKSDIPILLKRYM 348
            +V   G  L  S +G    + D P+L+  Y+
Sbjct: 289 LDVFGRGGALKSSWYGDCLPERDFPMLVDLYL 320

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  175 bits (445), Expect = 1e-52
 Identities = 80/304 (26%), Positives = 119/304 (39%), Gaps = 36/304 (11%)

Query: 43  EVRVRIICTSLCHSDVTFWK-MKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPH 101
           EV VR+    LC +D+   +     P   P ILGHE  GVV  VG  V GV  GD V+  
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVL 60

Query: 102 FLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTV 161
               C  C  CR                                 I        F+EY V
Sbjct: 61  PNLGCGTCELCRELCPGGG--------------------------ILGEGLDGGFAEYVV 94

Query: 162 LDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGA 221
           +   ++V +   +    A LL   ++T   A  R   ++ G TV++ G G +GL  A+ A
Sbjct: 95  VPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLA 154

Query: 222 RLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 281
           +  GA R+I  D   EK E+ K  G    ++ K   ++ + + +     GGAD   + VG
Sbjct: 155 KAAGA-RVIVTDRSDEKLELAKELGADHVIDYK---EEDLEEELRLTGGGGADVVIDAVG 210

Query: 282 LASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIP 341
               + +A    R G G+ +V+G    G         +L     ++GS  G  +   D  
Sbjct: 211 GPETLAQALRLLRPG-GRIVVVGGT-SGGPPLDDLRRLLFKELTIIGSTGGTRE---DFE 265

Query: 342 ILLK 345
             L 
Sbjct: 266 EALD 269

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  167 bits (424), Expect = 2e-48
 Identities = 99/333 (29%), Positives = 155/333 (46%), Gaps = 13/333 (3%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           +AA+   P  PL I+E+ V  P   E+ +R+    +CHSD+   K  + P   P +LGHE
Sbjct: 2   KAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLK-GELPFPPPFVLGHE 60

Query: 78  AIGVVESVGENVDGVV---EGDVVIPHFLADCTECVGCRSKKGNLC-SAFPFKISPWMPR 133
             G V  VG NV+       GD V+  F+  C +C  C   K NLC   F +        
Sbjct: 61  ISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLY 120

Query: 134 DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAA 193
           D T+R   L G  ++ + S+   +EY V+    +  +  ++    + +L C   T  GA 
Sbjct: 121 DGTTRLFRLDGGPVYMY-SMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGAL 179

Query: 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253
              A+V  G TV + G+G +G +  + A+  GA+ II VDV  EK    K  G T  VN+
Sbjct: 180 KHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNA 239

Query: 254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL 312
               D      I ++T G G D   E +G     + A    R G G+ +V+G+   G+  
Sbjct: 240 AK-ED--AVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATA 295

Query: 313 SLSSFEVLHSGKILMGSLFGGLKAKSDIPILLK 345
            +    ++  G  ++GS   G + + D+P L+ 
Sbjct: 296 EIPITRLVRRGIKIIGSY--GARPRQDLPELVG 326

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  159 bits (403), Expect = 1e-45
 Identities = 90/330 (27%), Positives = 134/330 (40%), Gaps = 26/330 (7%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDV-TFWKMKDFPAVFPRILGH 76
           +AA+    G  + ++E     P   +V +R+  T +C SD+  +   + F      ILGH
Sbjct: 2   KAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGH 61

Query: 77  EAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQT 136
           E +G V  VG  V G   GD V+      C  C  CR+ + NLC    F     +     
Sbjct: 62  EFVGEVVEVGV-VRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGL----- 115

Query: 137 SRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT 196
                + G           F+EY  +     +   P      A  L+  ++T        
Sbjct: 116 --GGGIDG----------GFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAYHGHAER 163

Query: 197 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256
           A V  G TVV+ G G IGL     A+L GA+ +I VD   E+ E+ K  G  + V +   
Sbjct: 164 AAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNP-- 221

Query: 257 GDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLS 315
            +      I+++T G GAD   E VG    + +A    R G G  +V+GV   G  + L 
Sbjct: 222 SEDDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVY-GGEDIPLP 279

Query: 316 SFEVLHSGKILMGSLFGGLKAKSDIPILLK 345
           +  V+     L GSL      + D    L 
Sbjct: 280 AGLVVSKELTLRGSLRPS--GREDFERALD 307

Length = 350

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  156 bits (398), Expect = 6e-45
 Identities = 90/324 (27%), Positives = 142/324 (43%), Gaps = 36/324 (11%)

Query: 14  PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPR 72
            +  +AA+    G+PL I+EV V  P   EV +++    +CH+D+   K  D+P    P 
Sbjct: 1   MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAK-GDWPVPKLPL 59

Query: 73  ILGHEAIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM 131
           I GHE +G V  VGE V G+  GD V +   +  C EC  CRS   NLC           
Sbjct: 60  IPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLC----------- 108

Query: 132 PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVG 191
                   + + G T         ++EY V+   +VVK+   +    A  L C   T   
Sbjct: 109 ------PNQKITGYTTD-----GGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYR 157

Query: 192 AAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251
           A  + ANV+ G  V + G G +G    + A+  GA  +I +    EK E+ K+ G    +
Sbjct: 158 AL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVI 215

Query: 252 NSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ 311
           NS    D    + +       AD   + VG  + ++ +    R+G G  +++G+   G  
Sbjct: 216 NSS---DSDALEAV----KEIADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPI 266

Query: 312 LSLSSFEVLHSGKILMGSLFGGLK 335
             L +F ++     ++GSL G   
Sbjct: 267 PLLPAFLLILKEISIVGSLVGTRA 290

Length = 339

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  147 bits (374), Expect = 2e-41
 Identities = 89/307 (28%), Positives = 139/307 (45%), Gaps = 41/307 (13%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           +A +   PGE L ++EV V  P   EV +++    +C +D+  ++  +F A  P + GHE
Sbjct: 2   KALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYE-GEFGAAPPLVPGHE 59

Query: 78  AIGVVESVGENVDGVVEGD--VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ 135
             GVV +VG  V G   GD   V P+    C EC  CR  + NLC               
Sbjct: 60  FAGVVVAVGSKVTGFKVGDRVAVDPNIY--CGECFYCRRGRPNLCENL------------ 105

Query: 136 TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGVSTGVGA 192
                   G T +       F+EY V+    V K+   +    A L   LSC V      
Sbjct: 106 -----TAVGVTRN-----GGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVH----- 150

Query: 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252
                 ++ G +V++FG G IGL +A+  +L GA+R+   +   EK E+ K+ G TE V+
Sbjct: 151 GLDLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVD 210

Query: 253 SKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL 312
                 +   +   +    G D   E  G+   +++A    R+G G  +V GV  P +++
Sbjct: 211 ----PSREDPEAQKEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARV 265

Query: 313 SLSSFEV 319
           S+S FE+
Sbjct: 266 SISPFEI 272

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score =  140 bits (356), Expect = 1e-38
 Identities = 88/316 (27%), Positives = 128/316 (40%), Gaps = 30/316 (9%)

Query: 17  CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGH 76
            RAA+ T PG+PL I EV +       V VR+    +C SDV     +      P ILGH
Sbjct: 1   ARAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGH 60

Query: 77  EAIGVVESVGENVD------GVVEGD-VVIPHFLADCTECVGCRSKKGNLC-SAFPFKIS 128
           E +G V ++G  V        +  GD V        C  C  C       C +   +   
Sbjct: 61  EGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAP-CGRCYRCLVGDPTKCENRKKYGHE 119

Query: 129 PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI-AHVVKVDPTVPPNRACLLSCGVS 187
                        L G           ++E+  L     +V+V   VP   A   +C ++
Sbjct: 120 ASCDDPH------LSG----------GYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALA 163

Query: 188 TGVGAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 246
           T V AA   A  V  G TVV+ G G +GL     A+L GA R+I +D   E+ E+ + FG
Sbjct: 164 T-VLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFG 222

Query: 247 VTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
               ++     D     I+ D+T G GAD   E  G  + V E     R+G G  +++G 
Sbjct: 223 ADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGS 281

Query: 306 DQPGSQLSLSSFEVLH 321
             P   + L    ++ 
Sbjct: 282 VAPAGTVPLDPERIVR 297

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  140 bits (354), Expect = 2e-38
 Identities = 84/281 (29%), Positives = 117/281 (41%), Gaps = 27/281 (9%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           RAA+    GEPL I EV    P    V V +    +C SD   W+  D     P + GHE
Sbjct: 2   RAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHE 61

Query: 78  AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTS 137
             GVV  VGE+V     GD V   F+  C  C  CR+   N+C              Q  
Sbjct: 62  FAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVC------------EHQ-- 107

Query: 138 RFKDLRGETIHHFVSVSSFSEYTVLDIAHV--VKVDPTVPPNRACLLSCGVSTGVGAAWR 195
                       F    SF+EY  +  A V  V++   V    A  L C  +T   A   
Sbjct: 108 --------VQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVH 159

Query: 196 TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255
            A V+ G  V + G G +GL+    A   GA R+I VD+  +K E+ +  G    VN+  
Sbjct: 160 QARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNAS- 217

Query: 256 CGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKG 296
              + V+  + D+T GGA    + +G+    + + A  RK 
Sbjct: 218 -EVEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR 257

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  139 bits (352), Expect = 3e-38
 Identities = 85/280 (30%), Positives = 118/280 (42%), Gaps = 28/280 (10%)

Query: 26  GEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD-FPAVFPRILGHEAIGVVES 84
              LV++EV V  P   EV V++    +CHSD+             P  LGHE  G V  
Sbjct: 11  KGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVE 70

Query: 85  VGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRG 144
           VG  V     GD V    +  C  C  CR  +GNLC             +Q      + G
Sbjct: 71  VGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLC------------LNQGMPGLGIDG 118

Query: 145 ETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGST 204
                      F+EY V+    +V V   VP  +A + +  V T   A  R   V+ G T
Sbjct: 119 ----------GFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGET 168

Query: 205 VVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQI 264
           V++ GLG +GL   + A+  GA  +I VD+  EK E+ K  G  E +NS    D S    
Sbjct: 169 VLVIGLGGLGLNAVQIAKAMGAA-VIAVDIKEEKLELAKELGADEVLNSL---DDSPKDK 224

Query: 265 IIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 304
                 GG D  F+ VG     ++A    + G G+ +V+G
Sbjct: 225 KAAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVG 263

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  138 bits (351), Expect = 5e-38
 Identities = 80/291 (27%), Positives = 135/291 (46%), Gaps = 36/291 (12%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           +A + T PG+ L  +++    P   EV V++    +C SD+  + +       P +LGHE
Sbjct: 2   KALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRY-LGTGAYHPPLVLGHE 59

Query: 78  AIGVVESVGENVDGVVEGD--VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ 135
             G VE VG  VD +  GD   V P  L  C +C  C+  + +LCS +            
Sbjct: 60  FSGTVEEVGSGVDDLAVGDRVAVNP--LLPCGKCEYCKKGEYSLCSNY------------ 105

Query: 136 TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR 195
                D  G          +F+EY  +   +++K+   V    A ++    +  + A   
Sbjct: 106 -----DYIGSRRD-----GAFAEYVSVPARNLIKIPDHVDYEEAAMIE-PAAVALHAVRL 154

Query: 196 TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255
            A + +G TVV+ G G+IGL   +  ++ GA R+I VD+  EK  + +  G  + +N K 
Sbjct: 155 -AGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE 213

Query: 256 CGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
              + V     ++T+G GAD   E  G  + +++A A  R G GK +++G+
Sbjct: 214 EDVEKVR----ELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGI 259

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  136 bits (346), Expect = 2e-37
 Identities = 81/321 (25%), Positives = 132/321 (41%), Gaps = 41/321 (12%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           +AA+   P + + ++EV V  P   EV V++    +C +DV   +        PRILGHE
Sbjct: 2   KAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHE 60

Query: 78  AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTS 137
             G +  VG+ V G   GD V       C EC  C     N+C                 
Sbjct: 61  IAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMC----------------- 103

Query: 138 RFKDLRGETIHHFVSVSSFSEYTV-----LDIAHVVKVDPTVPPNRACL---LSCGVSTG 189
              + +            F+EY       +    V+K+   V    A L   L+C +   
Sbjct: 104 --PNYKKFGNL---YDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCI--- 155

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
              A R A ++ G TV++ G G IGL  A  A+  GA ++I  D+   + E  K+ G   
Sbjct: 156 --NAQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADY 213

Query: 250 FVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 308
            +++    ++ + + + ++TDG GAD      G      +A    RKG G+ +  G    
Sbjct: 214 TIDA---AEEDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPK 269

Query: 309 GSQLSLSSFEVLHSGKILMGS 329
           GS +++    + +    + GS
Sbjct: 270 GSTVNIDPNLIHYREITITGS 290

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score =  133 bits (336), Expect = 7e-36
 Identities = 89/289 (30%), Positives = 126/289 (43%), Gaps = 41/289 (14%)

Query: 18  RAAIATAPGEPLVIDEVIVDP-PNSHEVRVRIICTSLCHSDV-TFWKMKDFPAVFP-RIL 74
           +A      G+   I++ I    PN  +  VR    + C SDV T W     P      IL
Sbjct: 2   KAFAMLGIGKVGWIEKPIPVCGPN--DAIVRPTAVAPCTSDVHTVWG--GAPGERHGMIL 57

Query: 75  GHEAIGVVESVGENVDGVVEGD-VVIPHFLAD--CTECV-GCRSKKGNLCSAFPFKISPW 130
           GHEA+GVVE VG  V     GD V++P    D        G  S+ G +   + F     
Sbjct: 58  GHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKF----- 112

Query: 131 MPRDQTSRFKDLRGETIHHFVSVSSFSEYT-VLDI-AHVVKVDPTVPPNRACLLSCGVST 188
                 S FKD              F+EY  V D  A++  +   +   +A +L   +ST
Sbjct: 113 ------SNFKD------------GVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMST 154

Query: 189 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 248
           G   A   AN+++G TV +FG+G +GL    GARL GA RII V     + E+ K +G T
Sbjct: 155 GFHGAEL-ANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGAT 213

Query: 249 EFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKG 296
           + V+ KN     V + I+ +T G G D      G     ++A    + G
Sbjct: 214 DIVDYKNG---DVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG 259

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score =  131 bits (333), Expect = 2e-35
 Identities = 93/298 (31%), Positives = 126/298 (42%), Gaps = 48/298 (16%)

Query: 19  AAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKM---KDFPAVFPRILG 75
           AA+   PG+ L ++E  +  P   EV VR+    +C SDV ++K     DF    P +LG
Sbjct: 1   AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLG 59

Query: 76  HEAIGVVESVGENVDGVVEGDVV-----IPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
           HE+ G V +VG  V  +  GD V     +P     C  C  C+S + NLC    F  +P 
Sbjct: 60  HESAGTVVAVGSGVTHLKVGDRVAIEPGVP-----CRTCEFCKSGRYNLCPDMRFAATP- 113

Query: 131 MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGVS 187
            P D T                      Y         K+   V      L   LS GV 
Sbjct: 114 -PVDGT-------------------LCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGV- 152

Query: 188 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247
                A R A V  G TV++FG G IGL  A  A+  GAT+++  D+   + E  K  G 
Sbjct: 153 ----HACRRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGA 208

Query: 248 TEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEA-YACCRKGWGKTIVL 303
           T  VN +       ++ I ++  G G D   EC G  S +Q A YA    G   T+VL
Sbjct: 209 THTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPGG---TVVL 263

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  127 bits (322), Expect = 7e-34
 Identities = 92/327 (28%), Positives = 142/327 (43%), Gaps = 46/327 (14%)

Query: 17  CRAAIATAPGE-PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP--AVFPRI 73
            +AA+    GE P  + +V V  P   EV V++  + +CH+D+      D+P     P I
Sbjct: 1   MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALG-DWPVKPKLPLI 59

Query: 74  LGHEAIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
            GHE  GVV +VG  V G+  GD V +      C +C  CR+    LC            
Sbjct: 60  GGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPN---------- 109

Query: 133 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGA 192
           +  +    D             +F+EY + D  +V  +   +   +A  L C   T V  
Sbjct: 110 QKNSGYTVD------------GTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVT-VYK 156

Query: 193 AWRTANVEVGSTVVIFG----LGSIGL--AVAEGARLCGATRIIGVDVISEKFEIGKRFG 246
           A + A ++ G  VVI G    LG +G+  A A G       R+I +DV  EK E+ K  G
Sbjct: 157 ALKKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGL------RVIAIDVGDEKLELAKELG 210

Query: 247 VTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
              FV+ K        + + ++T G GA         A+  ++A    R G G  + +G+
Sbjct: 211 ADAFVDFK---KSDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGL 266

Query: 306 DQPGSQLSLSSFEVLHSGKILMGSLFG 332
             PG  + L  F+++  G  ++GSL G
Sbjct: 267 -PPGGFIPLDPFDLVLRGITIVGSLVG 292

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  126 bits (318), Expect = 2e-33
 Identities = 89/323 (27%), Positives = 137/323 (42%), Gaps = 41/323 (12%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK---MKDFPAVFPRIL 74
           +AA     G+PL +++V V  P   +V VR+    +CHSD+           P   P  L
Sbjct: 2   KAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTL 61

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           GHE  G VE VG  VDG+ EGD V+ H    C  C  CR  + N C              
Sbjct: 62  GHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCEN------------ 109

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194
             +RF    G           F+EY ++    +VK+   + P  A  L+    T   A  
Sbjct: 110 --ARF---PGIGTD-----GGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVK 159

Query: 195 RTANV-EVGSTVVIF---GLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250
           +     + GSTVV+    GLG I + +    R      +I VD   E  ++ +R G    
Sbjct: 160 KALPYLDPGSTVVVIGVGGLGHIAVQI---LRALTPATVIAVDRSEEALKLAERLGADHV 216

Query: 251 VNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
           +N        V + + ++T G GAD   + VG    +  A     KG G+ +++G    G
Sbjct: 217 LN----ASDDVVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGY---G 268

Query: 310 SQLSLSSFEVLHSGKILMGSLFG 332
               L + +++ +   ++GSL+G
Sbjct: 269 GHGRLPTSDLVPTEISVIGSLWG 291

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score =  125 bits (317), Expect = 3e-33
 Identities = 84/275 (30%), Positives = 133/275 (48%), Gaps = 35/275 (12%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           +A +   PG  L + ++    P + EV VR+    +C SD+  +  ++  A +PRILGHE
Sbjct: 2   KALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHE 60

Query: 78  AIGVVESVGENVDGVVEGD--VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ 135
             G V  VGE V G+  GD  VV P+    C EC  CR  + N C      +        
Sbjct: 61  LSGEVVEVGEGVAGLKVGDRVVVDPYI--SCGECYACRKGRPNCCE----NLQ------- 107

Query: 136 TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR 195
                 + G  +H       F+EY V+    ++  +  +  ++A L+   ++ G  A  R
Sbjct: 108 ------VLG--VH---RDGGFAEYIVVPADALLVPE-GLSLDQAALVEP-LAIGAHAVRR 154

Query: 196 TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255
            A V  G TV++ G G IGL V + A+  GA R+I VD+  E+ E  +  G  + +N   
Sbjct: 155 -AGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINV-- 210

Query: 256 CGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEA 289
            GD+ V+  + ++TDG GAD   +  G  + ++EA
Sbjct: 211 -GDEDVAARLRELTDGEGADVVIDATGNPASMEEA 244

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  125 bits (315), Expect = 7e-33
 Identities = 83/330 (25%), Positives = 125/330 (37%), Gaps = 42/330 (12%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFW------------KMKD 65
           +AA    PG+PL   E+    P   EV V++    +CHSD+  W             + D
Sbjct: 2   KAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDD 61

Query: 66  FPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPF 125
                P +LGHE +G V +VG +   V  GD V+ +    C EC  C +   NLC+    
Sbjct: 62  RGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCA---- 117

Query: 126 KISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
                         K               ++EY ++  +  +     + P  A  L+C 
Sbjct: 118 --------------KGRALGIFQD----GGYAEYVIVPHSRYLVDPGGLDPALAATLACS 159

Query: 186 VSTGVGAAWRTANVEVGST-VVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244
             T   A  +     V    VVI G G +GL      +  G   II VD+   K E  K 
Sbjct: 160 GLTAYSAV-KKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA 218

Query: 245 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 304
            G    VN  +       + II    GG D   + V  ++    A+    KG GK +++G
Sbjct: 219 AGADVVVNGSDPDAA---KRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVG 274

Query: 305 VDQPGSQLSLSSFEVLHSGKILMGSLFGGL 334
           +   G + +L    +      + GS  G L
Sbjct: 275 L--FGGEATLPLPLLPLRALTIQGSYVGSL 302

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score =  122 bits (308), Expect = 7e-32
 Identities = 77/259 (29%), Positives = 112/259 (43%), Gaps = 26/259 (10%)

Query: 41  SHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIP 100
            H+  VR+  TS+C SD+  ++     A    ILGHE +G V  VG +V  +  GD V  
Sbjct: 25  PHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPGDRVSV 84

Query: 101 HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYT 160
             +  C  C  CR      C    +               D               +EY 
Sbjct: 85  PCITFCGRCRFCRRGYHAHCENGLWGWKL-------GNRID------------GGQAEYV 125

Query: 161 VLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVA 218
            +  A  ++ K+   +P   A +LS  + TG   A   A ++ GSTV + G G +GL   
Sbjct: 126 RVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAV 184

Query: 219 EGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCF 277
            GARL GA RII VD   E+ ++ K  G T+ +N KN     + + I+++T G G D   
Sbjct: 185 AGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNG---DIVEQILELTGGRGVDCVI 241

Query: 278 ECVGLASLVQEAYACCRKG 296
           E VG     ++A    R G
Sbjct: 242 EAVGFEETFEQAVKVVRPG 260

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score =  120 bits (303), Expect = 3e-31
 Identities = 79/303 (26%), Positives = 127/303 (41%), Gaps = 31/303 (10%)

Query: 29  LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL-GHEAIGVVESVGE 87
           + + E  V  P   EV +R+  + LC SD+ ++        +  ++ GHE  GVV +VG 
Sbjct: 12  VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGP 71

Query: 88  NVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 147
            V     GD V+ +    C  C  CR     LC++                  +  G   
Sbjct: 72  GVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYG-----------WNRDG--- 117

Query: 148 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVI 207
                    +EY ++    ++ +   +      LL CG+ T    A R   V    TV++
Sbjct: 118 -------GHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTA-YHALRRVGVSGRDTVLV 169

Query: 208 FGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIID 267
            G G +GL     AR  GA  +IGVD   E+ E+ K  G    +NS   G   V +I   
Sbjct: 170 VGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINS---GQDDVQEIREL 226

Query: 268 MTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLS-SFEVLHSGKIL 326
            +  GAD   EC G  +  + A    R  WG+ +++G    G +L++  S +++   + L
Sbjct: 227 TSGAGADVAIECSGNTAARRLALEAVRP-WGRLVLVGE---GGELTIEVSNDLIRKQRTL 282

Query: 327 MGS 329
           +GS
Sbjct: 283 IGS 285

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  118 bits (298), Expect = 2e-30
 Identities = 78/324 (24%), Positives = 121/324 (37%), Gaps = 65/324 (20%)

Query: 31  IDEVIVDPPNSHEVRVRIICTSLCHSDV-------TFWKMKDFP---------AVFPRIL 74
           ++EV   P    EV++++    +C SD+        F      P            P  L
Sbjct: 14  VEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIF-----IPTEGHPHLTGETAPVTL 68

Query: 75  GHEAIGVVESVGENVDGVVEGD--VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
           GHE  GVV  VG  V G   GD  VV P     C  C  C+    NLC +  F       
Sbjct: 69  GHEFSGVVVEVGSGVTGFKVGDRVVVEPTI--KCGTCGACKRGLYNLCDSLGF------- 119

Query: 133 RDQTSRFKDLRGETIHHFVSVSS--FSEYTVLDIAHVVKVDPTVPPNRACL---LSCGVS 187
                             +      F+EY V+   HV K+   VP   A L   L+    
Sbjct: 120 ----------------IGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAVAWH 163

Query: 188 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247
                A R +  + G T ++ G G IGL      +  GA++II  +    + E+ +  G 
Sbjct: 164 -----AVRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGA 218

Query: 248 TEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306
           T  ++        V   +  +T G G D  F+C G+ + +  A    R   G  + + + 
Sbjct: 219 TIVLDPTEVD---VVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAI- 273

Query: 307 QPGSQLSLSSFEVLHSGKILMGSL 330
                +S +  +++   K L GS+
Sbjct: 274 -WEKPISFNPNDLVLKEKTLTGSI 296

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  118 bits (297), Expect = 2e-30
 Identities = 82/266 (30%), Positives = 117/266 (43%), Gaps = 34/266 (12%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV-FPRILGH 76
           +AAI   P +PL I+EV    P   EV +++    +C+ D+ FWK   FP   +P ILGH
Sbjct: 2   KAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWK-GFFPRGKYPLILGH 60

Query: 77  EAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQT 136
           E +G VE VGE V+    GD VI ++   C +C  C S + NLC                
Sbjct: 61  EIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLC---------------- 104

Query: 137 SRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT 196
                 R    +       F+EY  +    +VK+   V    A L +C V T V A  + 
Sbjct: 105 ------RNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHAL-KR 157

Query: 197 ANVEVGSTVVI-FGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255
           A V+ G TV++    G +G+   + A+  GA R+I V    EK +I K  G    ++   
Sbjct: 158 AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGSK 216

Query: 256 CGDKSVSQIIIDMTDGGADYCFECVG 281
             +            GGAD   E VG
Sbjct: 217 FSEDVKKL-------GGADVVIELVG 235

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score =  116 bits (294), Expect = 1e-29
 Identities = 88/313 (28%), Positives = 134/313 (42%), Gaps = 59/313 (18%)

Query: 30  VIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFP-RILGHEAIGVVESVGEN 88
           V D  I DP    +  VR+  T++C SD+  +     P +    ILGHE +GVVE VG  
Sbjct: 17  VPDPKIEDP---TDAIVRVTATAICGSDLHLY-HGYIPGMKKGDILGHEFMGVVEEVGPE 72

Query: 89  VDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 147
           V  +  GD VV+P  +A C EC  C+    + C             D T+   ++     
Sbjct: 73  VRNLKVGDRVVVPFTIA-CGECFYCKRGLYSQC-------------DNTNPSAEMAKLYG 118

Query: 148 HHFVSVSSFS-----------EYTVLDIAHV--VKVDPTVPPNRACLLSCGVSTGVGAAW 194
           H    +  +S           EY  +  A V   K+   +   +A  LS  + TG  AA 
Sbjct: 119 HAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAA- 177

Query: 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254
             A V+ G TV ++G G +GL  A  A+L GA R+I +D + E+ E+ +     E +N +
Sbjct: 178 ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFE 237

Query: 255 NCGDKSVSQIIIDMTDG-GADYCFECVGL---------------------ASLVQEAYAC 292
                 V + + ++T G G D C + VG+                        ++EA   
Sbjct: 238 EV--DDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQA 295

Query: 293 CRKGWGKTIVLGV 305
            RKG G   ++GV
Sbjct: 296 VRKG-GTVSIIGV 307

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  114 bits (287), Expect = 5e-29
 Identities = 82/319 (25%), Positives = 130/319 (40%), Gaps = 34/319 (10%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           +AA+  A G PL  +EV V  P   EV ++I    +CH+D+   +     + +P + GHE
Sbjct: 1   KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHE 60

Query: 78  AIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQT 136
            +G V  VG  V+G   GD V +   +  C  C  CR    NLC                
Sbjct: 61  IVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKA------------- 107

Query: 137 SRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT 196
                  G     + +   ++EY V D  + V +   +P  +A  L C   T V +A R 
Sbjct: 108 ----VNTG-----YTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGIT-VYSALRD 157

Query: 197 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256
           A    G  V + G+G +G    + AR  G    + +    +K E+ ++ G  E V+S   
Sbjct: 158 AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGAE 216

Query: 257 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS 316
            D            GGAD     V   +  + A    R+G G+ +++G+       S   
Sbjct: 217 LD-------EQAAAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLP-ESPPFSPDI 267

Query: 317 FEVLHSGKILMGSLFGGLK 335
           F ++   + + GS  GG  
Sbjct: 268 FPLIMKRQSIAGSTHGGRA 286

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score =  113 bits (284), Expect = 1e-28
 Identities = 102/340 (30%), Positives = 151/340 (44%), Gaps = 49/340 (14%)

Query: 18  RAAIATAPGE---PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL 74
           RA +   PG+     V D VI +P    +  +R++ T +C SD+  ++    P   P  +
Sbjct: 2   RATVIHGPGDIRVEEVPDPVIEEP---TDAVIRVVATCVCGSDLWPYRGVS-PTRAPAPI 57

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           GHE +GVVE VG  V  V  GD VI  F      C  CR+     C              
Sbjct: 58  GHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSC-------------- 103

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH--VVKVDPTVPPNRACL------LSCGV 186
                  + G     FV      EY  + +A   +VKV P  P +   L      LS  +
Sbjct: 104 -------VHGGFWGAFVD-GGQGEYVRVPLADGTLVKV-PGSPSDDEDLLPSLLALSDVM 154

Query: 187 STGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 246
            TG  AA  +A V  GSTVV+ G G++GL     A+  GA RII +    ++  + + FG
Sbjct: 155 GTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFG 213

Query: 247 VTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
            T+ V  +  G+++V++ + ++T G GAD   ECVG    +++A A  R G G+   +GV
Sbjct: 214 ATDIVAER--GEEAVAR-VRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGV 269

Query: 306 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLK 345
             P   + L   E+      L G   G    +  +P LL 
Sbjct: 270 --PHGGVELDVRELFFRNVGLAG---GPAPVRRYLPELLD 304

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score =  106 bits (267), Expect = 4e-26
 Identities = 74/244 (30%), Positives = 108/244 (44%), Gaps = 37/244 (15%)

Query: 46  VRIICTSLCHSDVTFWKMKDFPAVFP-RILGHEAIGVVESVGENVDGVVEGDVVIPHFLA 104
           V+++ T++C +D+   K  D P V P RILGHE +GVVE VG  V     GD V+   ++
Sbjct: 30  VKMLKTTICGTDLHILK-GDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCIS 88

Query: 105 DCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH----HFVSV--SSFSE 158
            C  C  CR    + C +       W           + G  I      +V +  +  S 
Sbjct: 89  SCGTCGYCRKGLYSHCES-----GGW-----------ILGNLIDGTQAEYVRIPHADNSL 132

Query: 159 YTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVA 218
           Y         K+   V    A +LS  + TG         V+ G TV I G G +GLA  
Sbjct: 133 Y---------KLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAAL 183

Query: 219 EGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCF 277
             A+L   ++II VD+   + E+ K+ G T  VNS         + ++++TDG G D   
Sbjct: 184 LTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSA---KGDAIEQVLELTDGRGVDVVI 240

Query: 278 ECVG 281
           E VG
Sbjct: 241 EAVG 244

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score =  106 bits (266), Expect = 4e-26
 Identities = 87/301 (28%), Positives = 131/301 (43%), Gaps = 39/301 (12%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV-FPRILGH 76
           +A I     +   I+EV    P   EV +++    LC+ D+   +   +P + +P ILGH
Sbjct: 2   KAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQ-GFYPRMKYPVILGH 60

Query: 77  EAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQT 136
           E +G VE VGENV G   GD V     A    C  CRS +   C                
Sbjct: 61  EVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYC---------------- 104

Query: 137 SRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT 196
            + +   GE +  F     F+EY  + +  +VKV P V    A ++ C          R 
Sbjct: 105 -KNRLGYGEELDGF-----FAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGL-RR 157

Query: 197 ANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255
           A V+ G TV++ G  G +G+   + A+  GA ++I V     K +I  ++   ++V   +
Sbjct: 158 AGVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKYA--DYVIVGS 214

Query: 256 CGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG-VD-QPGSQLS 313
              + V +I      GGAD   E VG  +L +E+      G GK I +G VD  P   L 
Sbjct: 215 KFSEEVKKI------GGADIVIETVGTPTL-EESLRSLNMG-GKIIQIGNVDPSPTYSLR 266

Query: 314 L 314
           L
Sbjct: 267 L 267

Length = 334

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score =  106 bits (266), Expect = 5e-26
 Identities = 76/271 (28%), Positives = 112/271 (41%), Gaps = 27/271 (9%)

Query: 29  LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF---PRILGHEAIGVVESV 85
           L ++E     P   EVRVR+    +C SD+ +++   F  V    P +LGHE  GVVE+V
Sbjct: 9   LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAV 68

Query: 86  GENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE 145
           G  V G+  G  V  +    C  C  CR+ + NLC    F  S         RF  ++G 
Sbjct: 69  GPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGS-------AMRFPHVQG- 120

Query: 146 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTV 205
                     F EY V+D +  V +   +   RA  L+  ++  + A  R  ++  G  V
Sbjct: 121 ---------GFREYLVVDASQCVPLPDGLSLRRAA-LAEPLAVALHAVNRAGDL-AGKRV 169

Query: 206 VIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQII 265
           ++ G G IG  V   AR  GA  I+  D+      + +  G  E VN       + +   
Sbjct: 170 LVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYAADK 229

Query: 266 IDMTDGGADYCFECVGLASLVQEAYACCRKG 296
                G  D  FE  G  + +  A    R G
Sbjct: 230 -----GDFDVVFEASGAPAALASALRVVRPG 255

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score =  103 bits (260), Expect = 2e-25
 Identities = 81/294 (27%), Positives = 131/294 (44%), Gaps = 38/294 (12%)

Query: 18  RAAIATAPGEPLV-IDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGH 76
           +A + T PG   V + EV    P   EV +++    +C SD+  +K    P   P +LGH
Sbjct: 2   KALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGH 61

Query: 77  EAIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ 135
           E  G +  VG +V+G   GD VV     + C  C  CR    NLC               
Sbjct: 62  EFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPH------------- 108

Query: 136 TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGVSTGVGA 192
               +   G           F+EY ++    + ++   +    A L   L+  V     A
Sbjct: 109 ----RKGIGTQAD-----GGFAEYVLVPEESLHELPENLSLEAAALTEPLAVAVH----A 155

Query: 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRII-GVDVISEKFEIGKRFGVTEFV 251
               + +  G TVV+FG G IGL  A+ A+L GAT ++ G +    + ++ K  G     
Sbjct: 156 VAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGAD--- 212

Query: 252 NSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 304
            + N G++ +++++ ++TDG GAD   EC G    +++A    RKG G+ + +G
Sbjct: 213 -AVNGGEEDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVG 264

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  101 bits (253), Expect = 4e-24
 Identities = 77/328 (23%), Positives = 119/328 (36%), Gaps = 52/328 (15%)

Query: 22  ATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGV 81
           A      L        P    +V ++I    +CHSD+   + +  P  +P + GHE +G+
Sbjct: 5   ARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGI 64

Query: 82  VESVGENVDGVVEGDVVIPHFLAD-CTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFK 140
           V +VG  V     GD V      D C  C  C+S +   C           P+   +   
Sbjct: 65  VVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYC-----------PKGVVTYNG 113

Query: 141 DLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVE 200
                TI        ++++ V+D   V K+   +    A  L C   T V +  +   V 
Sbjct: 114 KYPDGTITQ----GGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGIT-VYSPLKRNGVG 168

Query: 201 VGSTVVIFGLGSIG-----LAVAEGARLCGATRIIGVDVIS---EKFEIGKRFGVTEFVN 252
            G  V + G+G +G      A A GA          V   S    K E   + G  EF+ 
Sbjct: 169 PGKRVGVVGIGGLGHLAVKFAKALGAE---------VTAFSRSPSKKEDALKLGADEFIA 219

Query: 253 SKNCGD-KSVSQ---IIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 308
           +K+    K  +    +IID      D             + Y    K  G  +++G   P
Sbjct: 220 TKDPEAMKKAAGSLDLIIDTVSASHDL------------DPYLSLLKPGGTLVLVGA--P 265

Query: 309 GSQLSLSSFEVLHSGKILMGSLFGGLKA 336
              L +  F ++   K + GSL GG K 
Sbjct: 266 EEPLPVPPFPLIFGRKSVAGSLIGGRKE 293

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score =   99 bits (250), Expect = 8e-24
 Identities = 59/225 (26%), Positives = 87/225 (38%), Gaps = 41/225 (18%)

Query: 18  RAAIATAPG----EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF----WKMKDFPAV 69
           +A +   PG     PL + EV V  P   EV +++    +C +D+            P  
Sbjct: 2   KAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLP----PPK 57

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKIS 128
            P I GHE +G VE+VG  V     GD V +P   + C EC  CRS + NLC    F   
Sbjct: 58  LPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT-- 115

Query: 129 PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVST 188
                          G T+        ++EY V D      +        A  L C    
Sbjct: 116 ---------------GYTVD-----GGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGII 155

Query: 189 GVGAAWRTANVEVGSTVVIFGLGSIG-----LAVAEGARLCGATR 228
           G   A + A ++ G  + ++G G+       +A  +GA +   TR
Sbjct: 156 GYR-ALKLAGLKPGQRLGLYGFGASAHLALQIARYQGAEVFAFTR 199

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score = 98.5 bits (246), Expect = 3e-23
 Identities = 75/300 (25%), Positives = 121/300 (40%), Gaps = 50/300 (16%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPA---VFPRIL 74
           +A + T  G    + EV V  P   EV ++++  S+C +DV  ++  ++       P I 
Sbjct: 2   KAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIF 61

Query: 75  GHEAIGVVESVGENVDGVVEGDVV-----IPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           GHE  G V  VGE V  V  GD V     I      C +C  CR+   ++C         
Sbjct: 62  GHEFAGEVVEVGEGVTRVKVGDYVSAETHIV-----CGKCYQCRTGNYHVC--------- 107

Query: 130 WMPRDQTSRF--KDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 187
                Q ++    D  G           F+EY V+   ++ K D  +PP  A      + 
Sbjct: 108 -----QNTKILGVDTDG----------CFAEYVVVPEENLWKNDKDIPPEIA-----SIQ 147

Query: 188 TGVGAAWRTANVE--VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245
             +G A  T       G +V+I G G IGL     A+  GA+ +I  D    + E+ K+ 
Sbjct: 148 EPLGNAVHTVLAGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKM 207

Query: 246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
           G    +N +   ++ V ++       G D   E  G    +++       G G+  +LG+
Sbjct: 208 GADVVINPR---EEDVVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGL 263

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score = 97.8 bits (244), Expect = 4e-23
 Identities = 73/320 (22%), Positives = 112/320 (35%), Gaps = 57/320 (17%)

Query: 18  RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRIL 74
           +A +    G P  L + EV    P   EV VR+    +   DV   +    P    P I 
Sbjct: 2   KAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIP 61

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           G EA GVV +VG  V G   GD V                                    
Sbjct: 62  GSEAAGVVVAVGSGVTGFKVGDRVAALGG------------------------------- 90

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194
                                ++EY V+    +V +   +    A  L     T   A +
Sbjct: 91  ---------------VGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALF 135

Query: 195 RTANVEVGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253
             A ++ G TV++ G  G +G A  + A+  GAT +  V   SEK E+ K  G    +N 
Sbjct: 136 DRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSS-SEKLELLKELGADHVINY 194

Query: 254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL 312
           +   ++   + + ++T G G D   + VG       + A    G G+ + +G    G  +
Sbjct: 195 R---EEDFVEQVRELTGGKGVDVVLDTVG-GDTFAASLAALAPG-GRLVSIGALSGGPPV 249

Query: 313 SLSSFEVLHSGKILMGSLFG 332
            L+   +L     L G   G
Sbjct: 250 PLNLLPLLGKRLTLRGVTLG 269

Length = 326

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score = 96.9 bits (242), Expect = 1e-22
 Identities = 73/269 (27%), Positives = 114/269 (42%), Gaps = 30/269 (11%)

Query: 46  VRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLAD 105
           V++   ++C SD+  ++          +LGHE +G V  VG  V  +  GD V+  F   
Sbjct: 30  VKVTAAAICGSDLHIYRGHIPSTP-GFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIA 88

Query: 106 CTECVGCRSKKGNLCS---AFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVL 162
           C EC  CR  +   C+    F +  SP +   Q              +V V  F++ T+ 
Sbjct: 89  CGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQA------------EYVRVP-FADGTL- 134

Query: 163 DIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGAR 222
                +K+   +    A LL   + TG   A + A V  G TV + G G +GL     A+
Sbjct: 135 -----LKLPDGLSDEAALLLGDILPTGYFGA-KRAQVRPGDTVAVIGCGPVGLCAVLSAQ 188

Query: 223 LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVG 281
           + GA R+  VD + E+ E     G  E +N +   D    + + + T+G GAD   E VG
Sbjct: 189 VLGAARVFAVDPVPERLERAAALG-AEPINFE---DAEPVERVREATEGRGADVVLEAVG 244

Query: 282 LASLVQEAYACCRKGWGKTIVLGVDQPGS 310
            A+ +  A+   R   G    +GV     
Sbjct: 245 GAAALDLAFDLVRP-GGVISSVGVHTAEE 272

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 95.5 bits (238), Expect = 2e-22
 Identities = 64/293 (21%), Positives = 105/293 (35%), Gaps = 66/293 (22%)

Query: 23  TAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFW---KMKDFPAVFPRILGHEAI 79
           T PG    ++E     P   +V VR+    +C SD+  +   +        P   GHE  
Sbjct: 2   TGPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGW 60

Query: 80  GVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRF 139
           G V ++G  V G+  GD V                                         
Sbjct: 61  GRVVALGPGVRGLAVGDRVA---------------------------------------- 80

Query: 140 KDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP--PNRACLLSCGVSTGVGAAWRTA 197
                      +S  +F+EY + D  H V +   +         L C ++      +R  
Sbjct: 81  ----------GLSGGAFAEYDLADADHAVPLPSLLDGQAFPGEPLGCALN-----VFRRG 125

Query: 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG 257
            +  G TV + G G IGL   + A   GA R+I +D    +  + +  G TE V   +  
Sbjct: 126 WIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS-- 183

Query: 258 DKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            +++ + + ++T G GAD   E VG    +  A     +  G+ ++ G  Q G
Sbjct: 184 -EAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQDG 234

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 89.6 bits (223), Expect = 3e-22
 Identities = 38/129 (29%), Positives = 56/129 (43%), Gaps = 22/129 (17%)

Query: 42  HEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPH 101
            EV VR+    +C SD+  ++ +  P   P ILGHE  G+VE VG  V G+  GD V+ +
Sbjct: 2   GEVLVRVKAAGICGSDLHIYRGEPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVVVY 61

Query: 102 FLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTV 161
            L  C +C  CR  + NLC                       G  +        F+EY V
Sbjct: 62  PLIPCGKCAACREGRENLCPN-----------------GKFLGVHLD-----GGFAEYVV 99

Query: 162 LDIAHVVKV 170
           +   ++V +
Sbjct: 100 VPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 91.8 bits (228), Expect = 8e-21
 Identities = 89/286 (31%), Positives = 121/286 (42%), Gaps = 37/286 (12%)

Query: 29  LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MK--DFPAVFPRILGHEAIGVVESV 85
           L I    + P   H+VRVR+    +C SDV + K M+  DF    P ++GHE  G++E V
Sbjct: 29  LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEV 88

Query: 86  GENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE 145
           G  V  +V GD V       C  C  C+  + NLC    F  +P                
Sbjct: 89  GSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATP---------------- 132

Query: 146 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGVSTGVGAAWRTANVEVG 202
            +H      S +   V       K+   V      +   LS GV      A R AN+   
Sbjct: 133 PVH-----GSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVH-----ACRRANIGPE 182

Query: 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN-SKNCGD--K 259
           + V++ G G IGL     AR  GA RI+ VDV  E+  + K+ G  E V  S N  D   
Sbjct: 183 TNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVES 242

Query: 260 SVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
            V +I   M  GG D  F+CVG    +  A    R G GK  ++G+
Sbjct: 243 EVEEIQKAMG-GGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGM 286

Length = 364

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 91.1 bits (226), Expect = 1e-20
 Identities = 77/296 (26%), Positives = 123/296 (41%), Gaps = 43/296 (14%)

Query: 19  AAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF-----WKMKDFPAVFPRI 73
           A + T PG    + EV V  P   EV ++++ TS+C +DV       W         P++
Sbjct: 1   ALMKTKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKP--PQV 58

Query: 74  LGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR 133
           +GHE  G V  +G  V+G+  GD V       C +C  CR  + ++C             
Sbjct: 59  VGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVC------------- 105

Query: 134 DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGVSTGV 190
                    +   I    +   F+EY V+   ++ K   ++PP  A +   L   V T +
Sbjct: 106 ---------QNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTVL 156

Query: 191 GAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250
                 A    G +V++ G G IGL     A+  GA  +I  D    + E+ K+ G T  
Sbjct: 157 ------AGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYV 210

Query: 251 VNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
           VN      + V + + D+TDG G D   E  G    +++       G G+  +LG+
Sbjct: 211 VNPF---KEDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGL 262

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 85.4 bits (212), Expect = 3e-20
 Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 6/124 (4%)

Query: 213 IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG- 271
           +GLA  + A+  GA R+I VD   EK E+ K  G    +N +   D+   + + ++T G 
Sbjct: 2   VGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYR---DEDFVERVRELTGGR 58

Query: 272 GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331
           G D   +CVG  + +++A    R G    +V         +     ++L     ++GSL 
Sbjct: 59  GVDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGA--PVPFPLRDLLLKELTILGSLG 116

Query: 332 GGLK 335
           GG +
Sbjct: 117 GGRE 120

Length = 131

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score = 89.8 bits (223), Expect = 4e-20
 Identities = 77/293 (26%), Positives = 123/293 (41%), Gaps = 43/293 (14%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDV-------TFWKMKDFPAVF 70
           RA +   P +   ++EV V  P   E+ V++    +C  D+       +FW  ++ P   
Sbjct: 2   RAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYV 60

Query: 71  --PRILGHEAIGVVESVGENVD--GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 126
             P I GHE +G V  +GE  +  GV  GD VI   +  C  C  C   +  +C      
Sbjct: 61  KPPMIPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQK---- 116

Query: 127 ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LS 183
                         DL G   +    ++ +  +    I H  KV   +PP  A L   L+
Sbjct: 117 -------------HDLYGFQNNVNGGMAEYMRFPKEAIVH--KVPDDIPPEDAILIEPLA 161

Query: 184 CGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243
           C +     A  R AN++    VV+ G G +GL +   ARL    ++I +D+  E+  + +
Sbjct: 162 CALH----AVDR-ANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALAR 216

Query: 244 RFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRK 295
           +FG    +N     +  V + I ++T G G D   E  G  S V++     RK
Sbjct: 217 KFGADVVLNPP---EVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRK 266

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 89.9 bits (223), Expect = 6e-20
 Identities = 70/273 (25%), Positives = 115/273 (42%), Gaps = 37/273 (13%)

Query: 29  LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKM-KD----FPAV--FPRILGHEAIGV 81
           L +++V V      E+ +R+    +C SD+  ++  KD    +P +  FP ++GHE  GV
Sbjct: 39  LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGV 98

Query: 82  VESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKD 141
           VE  G+NV    +GD V    +  C  C  CRS   N C                   K+
Sbjct: 99  VEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHC----------------KNLKE 142

Query: 142 LRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV---PPNRACLLSCGVS-TGV---GAAW 194
           L       F +  +F+EY  ++  +  +++        ++A      V  T V   G   
Sbjct: 143 L------GFSADGAFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLFI 196

Query: 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254
           R      G+ VV++G G IGLA    A+  GA+++I  ++  E+  + K  G     N  
Sbjct: 197 RGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPT 256

Query: 255 NCGDKSVSQIIIDMTDG-GADYCFECVGLASLV 286
              D    + ++++T G GAD   E  G     
Sbjct: 257 KMRDCLSGEKVMEVTKGWGADIQVEAAGAPPAT 289

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score = 89.1 bits (222), Expect = 6e-20
 Identities = 76/301 (25%), Positives = 128/301 (42%), Gaps = 53/301 (17%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF-----WKMKDFPAVFPR 72
           +A +       L + +V V  P  ++V +++  T++C +DV       W  K  P   P 
Sbjct: 2   KALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPV--PM 59

Query: 73  ILGHEAIGVVESVGENVDGVVEGDVVIP--HFLADCTECVGCRSKKGNLCSAFPFKISPW 130
           ++GHE +G V  VG  V G   GD V    H +  C  C  CR+ + +LC          
Sbjct: 60  VVGHEFVGEVVEVGSEVTGFKVGDRVSGEGHIV--CGHCRNCRAGRRHLC---------- 107

Query: 131 MPRDQTSRFKDLRGETIHHFVSVS---SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 187
                    ++ +G      V V+   +F+EY V+   +V K+   +P + A +      
Sbjct: 108 ---------RNTKG------VGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIFD---- 148

Query: 188 TGVGAAWRTA---NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244
              G A  TA   ++ VG  V+I G G IG+  A  A+  GA  ++  DV   + E+ ++
Sbjct: 149 -PFGNAVHTALSFDL-VGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARK 206

Query: 245 FGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL 303
            G T  VN      + +  ++ ++    G D   E  G  S  ++       G G+  +L
Sbjct: 207 MGATRAVNV---AKEDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAML 262

Query: 304 G 304
           G
Sbjct: 263 G 263

Length = 341

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 88.9 bits (221), Expect = 9e-20
 Identities = 67/288 (23%), Positives = 114/288 (39%), Gaps = 40/288 (13%)

Query: 18  RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV-FPRIL 74
           +A +    G P  L   ++    P   EV VR+   +L H D+   +      +  P IL
Sbjct: 2   KAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHIL 61

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           G +  GVVE+VG  V  V  G  V+ +    C  C  C + + NLC+ +           
Sbjct: 62  GSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQY----------- 110

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194
                  + GE +        ++EY  +   +++ +   +    A        T    AW
Sbjct: 111 ------GILGEHVDGG-----YAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLT----AW 155

Query: 195 RT----ANVEVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
                 A +  G TV++ G GS +G A  + A+L GAT I       +K E  K  G   
Sbjct: 156 HMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGS-EDKLERAKELGADY 214

Query: 250 FVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKG 296
            ++ +    +   + + ++T   G D   E VG A+  +++     +G
Sbjct: 215 VIDYRK---EDFVREVRELTGKRGVDVVVEHVGAATW-EKSLKSLARG 258

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 85.3 bits (212), Expect = 1e-18
 Identities = 74/352 (21%), Positives = 120/352 (34%), Gaps = 74/352 (21%)

Query: 18  RAAIATAP-GEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV--FPRIL 74
           +AA+ T P G  LV+ +V V  P   EV V++   +L   D   WK +D+  +  +P IL
Sbjct: 2   KAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVD---WKHQDYGFIPSYPAIL 58

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           G +  G V  VG  V     GD V                + G                 
Sbjct: 59  GCDFAGTVVEVGSGVTRFKVGDRV----AGFVHGGNPNDPRNG----------------- 97

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVST------ 188
                               +F EY V D     K+   +    A  L  G+ T      
Sbjct: 98  --------------------AFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALF 137

Query: 189 ---GVGAAWRTAN-VEVGSTVVIFGLGS--IGLAVAEGARLCGATRIIGVDVISEK-FEI 241
              G+       +    G  V+I+G GS  +G    + A+L G  ++I     S K F++
Sbjct: 138 QKLGLPLPPPKPSPASKGKPVLIWG-GSSSVGTLAIQLAKLAGY-KVIT--TASPKNFDL 193

Query: 242 GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTI 301
            K  G     +     D  V + I   T G   Y  +C+      Q       +  G  +
Sbjct: 194 VKSLGADAVFDYH---DPDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKL 250

Query: 302 V--LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKW 351
           V  L V +          + +    +L  ++FG +    +   +  +Y+ + 
Sbjct: 251 VSLLPVPEET-----EPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPEL 297

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 83.9 bits (208), Expect = 2e-18
 Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 12/154 (7%)

Query: 157 SEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA 216
           +E  V+    +V +   +PP RA L +   +T +      A   +G  V + GLG +GL 
Sbjct: 55  AERVVVPANLLVPLPDGLPPERAALTALA-ATALNGVRD-AEPRLGERVAVVGLGLVGLL 112

Query: 217 VAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYC 276
            A+ A+  GA  ++GVD  + + E+ +  G  + V +             ++   GAD  
Sbjct: 113 AAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAAD---------TADEIGGRGADVV 163

Query: 277 FECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS 310
            E  G  S ++ A    R   G+ +++G      
Sbjct: 164 IEASGSPSALETALRLLRDR-GRVVLVGWYGLKP 196

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 83.1 bits (206), Expect = 8e-18
 Identities = 74/325 (22%), Positives = 132/325 (40%), Gaps = 51/325 (15%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           +A   T PG PL + E  V  P   EV +++    +CHSD    +       +PR+ GHE
Sbjct: 2   KAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHE 61

Query: 78  AIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQT 136
            +G +++VGE V     GD V +      C  C  CR                       
Sbjct: 62  VVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACR----------------------- 98

Query: 137 SRFKDLRGETIH----HFVSVSS---FSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVST 188
                 RG+ +H        V+    ++EY +     + ++   +    A  L C GV+T
Sbjct: 99  ------RGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTT 152

Query: 189 GVGAAWRTANVEVGSTVVIFGLGSIG-LAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247
               A R +  + G  V + G+G +G LAV + A   G  R + +   S+K ++ ++ G 
Sbjct: 153 --FNALRNSGAKPGDLVAVQGIGGLGHLAV-QYAAKMG-FRTVAISRGSDKADLARKLGA 208

Query: 248 TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 307
             ++++     + V++ + ++  GGA         A  +           GK ++LG   
Sbjct: 209 HHYIDTS---KEDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAA- 261

Query: 308 PGSQLSLSSFEVLHSGKILMGSLFG 332
            G  +++S  +++   K + G   G
Sbjct: 262 -GEPVAVSPLQLIMGRKSIHGWPSG 285

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 82.6 bits (204), Expect = 1e-17
 Identities = 71/297 (23%), Positives = 112/297 (37%), Gaps = 56/297 (18%)

Query: 43  EVRVRIICTSLCHSDVTFWKMKDFPAVF-------PRILGHEAIGVVESVGENVDGVVEG 95
           +V V++  + LC SD+        P +F       P  LGHE  G VE+VG  VD +  G
Sbjct: 27  DVLVKVASSGLCGSDI--------PRIFKNGAHYYPITLGHEFSGYVEAVGSGVDDLHPG 78

Query: 96  DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSS 155
           D V    L  C  C  C     +LC+ + F           SR                 
Sbjct: 79  DAVACVPLLPCFTCPECLRGFYSLCAKYDFI---------GSR-------------RDGG 116

Query: 156 FSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGL 215
            +EY V+   ++  +   +P      +   ++ G+ A       E G  V+I G G+IGL
Sbjct: 117 NAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHAFHLAQGCE-GKNVIIIGAGTIGL 174

Query: 216 AVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADY 275
              + A   GA  +  +D+ SEK  + K  G  +  NS+            +M+      
Sbjct: 175 LAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSR------------EMSAPQIQS 222

Query: 276 CFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332
               +    L+ E       G  +T+ L ++  G +  L+    LH    L  + FG
Sbjct: 223 VLRELRFDQLILET-----AGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFG 274

Length = 347

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 81.1 bits (201), Expect = 4e-17
 Identities = 94/341 (27%), Positives = 130/341 (38%), Gaps = 76/341 (22%)

Query: 20  AIATAPGEPLVIDEVIVDP-PNSHEVRVRIICTSLCHSDV--------TFWKMKDFPAVF 70
           AIA  PG+P V    I +P P   EV VR +   +C +D         T    +DF    
Sbjct: 3   AIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDF---- 58

Query: 71  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
             +LGHEA+GVVE VG+   G+  GD+V+P       +C+ CR  + + C          
Sbjct: 59  -LVLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCE--------- 107

Query: 131 MPRDQTSRFKDLRGET-IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGV 186
                T  + + RG   +H F       EY V D  ++VKV P++  +   L   LS   
Sbjct: 108 -----TGEYTE-RGIKGLHGF-----MREYFVDDPEYLVKVPPSL-ADVGVLLEPLSV-- 153

Query: 187 STGVGAAWRTANVEVGS--------TVVIFGLGSIGL-----AVAEGARLCGATRIIGVD 233
              V  A   A   V            ++ G G IGL         G  +    R    D
Sbjct: 154 ---VEKAIEQA-EAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNR---RD 206

Query: 234 VISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACC 293
               K +I +  G T +VNS       V         G  D   E  G+  L  EA    
Sbjct: 207 PPDPKADIVEELGAT-YVNSSKTPVAEVK------LVGEFDLIIEATGVPPLAFEALPAL 259

Query: 294 RKGWGKTIVLGVDQPGSQLSLSSFE-----VLHSGKILMGS 329
               G  I+ GV   G +  +   E     VL + K L+GS
Sbjct: 260 APN-GVVILFGVPGGGREFEVDGGELNRDLVLGN-KALVGS 298

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 80.1 bits (198), Expect = 7e-17
 Identities = 83/320 (25%), Positives = 136/320 (42%), Gaps = 39/320 (12%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           +AA+        V+ E  + P    E  V++    +CH+D+      DF     RILGHE
Sbjct: 2   KAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHV-ANGDFGDKTGRILGHE 60

Query: 78  AIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQT 136
            IG+V+ VG  V  +  GD V I  F   C  C  C + +  LC                
Sbjct: 61  GIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLC---------------- 104

Query: 137 SRFKDLR--GETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVSTGVGAA 193
              + ++  G T+         +E  ++   + VKV   + P +A  ++C GV+T    A
Sbjct: 105 ---RSVKNAGYTVD-----GGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTT--YKA 154

Query: 194 WRTANVEVGSTVVIFGLGSIG-LAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252
            + + ++ G  + I+G G +G LA+     +  A ++I VD+  +K  + K  G    +N
Sbjct: 155 IKVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTIN 213

Query: 253 SKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL 312
           SK   D      II    GGA          +   +A    R G G+ + +G+  P   +
Sbjct: 214 SKRVED---VAKIIQEKTGGAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGL--PPESM 267

Query: 313 SLSSFEVLHSGKILMGSLFG 332
            LS   ++  G  ++GSL G
Sbjct: 268 DLSIPRLVLDGIEVVGSLVG 287

Length = 338

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 78.4 bits (193), Expect = 3e-16
 Identities = 62/245 (25%), Positives = 112/245 (45%), Gaps = 22/245 (8%)

Query: 23  TAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV--FPRILGHEAIG 80
           T PG+P+V   V +    + +V V++    +CH+D++++ M         P  LGHE  G
Sbjct: 5   TEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYM-GVRTNHALPLALGHEISG 63

Query: 81  VVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFK 140
            V   G      +   V++P  +  C EC  C++ +G +C            R Q     
Sbjct: 64  RVIQAGAGAASWIGKAVIVPAVIP-CGECELCKTGRGTIC------------RAQKMPGN 110

Query: 141 DLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVE 200
           D++G    H V  +      V+D A +      +P     +++  V+T   AA + A ++
Sbjct: 111 DMQGGFASHIVVPAKG--LCVVDEARLAAAG--LPLEHVSVVADAVTTPYQAAVQ-AGLK 165

Query: 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKS 260
            G  V++ G G +G  + + A+  GA  ++ +D+  EK E+ K FG    +N K+   + 
Sbjct: 166 KGDLVIVIGAGGVGGYMVQTAKAMGAA-VVAIDIDPEKLEMMKGFGADLTLNPKDKSARE 224

Query: 261 VSQII 265
           V ++I
Sbjct: 225 VKKLI 229

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 77.9 bits (192), Expect = 4e-16
 Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 29/228 (12%)

Query: 29  LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGEN 88
           L I+E  +  P + EVRV++    +C SD   ++  +  A +PR++GHE  GV+++VGE 
Sbjct: 12  LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEG 71

Query: 89  VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 148
           VD    G+ V    +  C  C  C   K N+C++    +   + RD              
Sbjct: 72  VDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSL---VVLGVHRD-------------- 114

Query: 149 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV--GSTVV 206
                  FSEY V+   +  ++   +    A +    V     AA  T           +
Sbjct: 115 -----GGFSEYAVVPAKNAHRIPDAIADQYAVM----VEPFTIAANVTGRTGPTEQDVAL 165

Query: 207 IFGLGSIGLAVAEG-ARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253
           I+G G +GL + +    +     +I  D I E+  + K  G    +N+
Sbjct: 166 IYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINN 213

Length = 339

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 74.5 bits (184), Expect = 5e-15
 Identities = 54/283 (19%), Positives = 86/283 (30%), Gaps = 78/283 (27%)

Query: 18  RAAIATAPGEPLVIDEV-IVDP-PNSHEVRVRIICTSLCHSDVTF---WKMKDFPAVFPR 72
           +A      G P V++   +  P P   EV V++    +   D+          FP   P 
Sbjct: 2   KAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPL 61

Query: 73  ILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
           I GH+  GVV +VG  V G   GD V                                  
Sbjct: 62  IPGHDVAGVVVAVGPGVTGFKVGDEVF----------------------GMTP------- 92

Query: 133 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGA 192
                            F    +++EY V+    +      +    A      +      
Sbjct: 93  -----------------FTRGGAYAEYVVVPADELALKPANLSFEEA----AALPLAGLT 131

Query: 193 AWRT----ANVEVGSTVVIFG-LGSIG-----LAVAEGARLCGATRIIGVDVISEKFEIG 242
           AW+       ++ G TV+I G  G +G     LA A GAR+            +   +  
Sbjct: 132 AWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATAS-------AANADFL 184

Query: 243 KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASL 285
           +  G  E ++      +  +        GG D   + VG  +L
Sbjct: 185 RSLGADEVIDYTKGDFERAAAP------GGVDAVLDTVGGETL 221

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 68.5 bits (168), Expect = 7e-13
 Identities = 66/304 (21%), Positives = 107/304 (35%), Gaps = 56/304 (18%)

Query: 18  RAAIATAPGEPLVIDEVIVDP-PNSHEVRVRIICTSLCHSDVTFWK----MKDFPAVFPR 72
           RAA+      PLV+ + + DP P   +V V+++   +C SD+        M D       
Sbjct: 2   RAAVFR--DGPLVVRD-VPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSL 58

Query: 73  -------ILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPF 125
                  +LGHE  G V   G   +                      + K G   ++ P 
Sbjct: 59  MDLGADIVLGHEFCGEVVDYGPGTER---------------------KLKVGTRVTSLPL 97

Query: 126 KISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---L 182
            +             +  G           ++EY +L  A +++V   +    A L   L
Sbjct: 98  LLCGQGASCGIGLSPEAPG----------GYAEYMLLSEALLLRVPDGLSMEDAALTEPL 147

Query: 183 SCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242
           + G+      A R A +  G   ++ G G IGLAV    +  G   I+  D   E+  + 
Sbjct: 148 AVGLH-----AVRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALA 202

Query: 243 KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGA-DYCFECVGLASLVQEAYACCRKGWGKTI 301
              G    V+       +     +    G      FECVG   L+Q+       G G+ +
Sbjct: 203 LAMGADIVVDPAADSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIV 261

Query: 302 VLGV 305
           V+GV
Sbjct: 262 VVGV 265

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 67.3 bits (165), Expect = 1e-12
 Identities = 64/272 (23%), Positives = 102/272 (37%), Gaps = 61/272 (22%)

Query: 17  CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV---FP 71
            +A +   PG    L ++E+ +  P + EV V++    L   D   WK+  +      +P
Sbjct: 1   MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVD---WKVIAWGPPAWSYP 57

Query: 72  RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM 131
            + G +  GVV +VG  V G   GD V  H                              
Sbjct: 58  HVPGVDGAGVVVAVGAKVTGWKVGDRVAYH------------------------------ 87

Query: 132 PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVG 191
                S  +              SF+EYTV+D   V+ +  ++    A  L C   T   
Sbjct: 88  ----ASLARG------------GSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQ 131

Query: 192 AAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250
           A ++   +E G T++I G  G +G    + A+  G  R+I        FE  K  G    
Sbjct: 132 ALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVI-TTCSKRNFEYVKSLGADHV 189

Query: 251 VNSKNCGDKSVSQIIIDMTDG-GADYCFECVG 281
           ++     D+ V + I ++T G G D   + VG
Sbjct: 190 IDYN---DEDVCERIKEITGGRGVDAVLDTVG 218

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 67.4 bits (165), Expect = 2e-12
 Identities = 70/249 (28%), Positives = 106/249 (42%), Gaps = 39/249 (15%)

Query: 18  RAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSD---VTFWKMKDFPAVFPRI 73
           +A +    G E L +++V    P   EV +R+    +   D   +   K+K      P I
Sbjct: 2   KALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVK----PMPHI 57

Query: 74  LGHEAIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
            G E  GVVE VG++V GV +GD VV+ + + D T C  C S    LC            
Sbjct: 58  PGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGT-CDMCLSGNEMLC------------ 104

Query: 133 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGA 192
                     R   I   VS   ++EY V+   ++ K+  ++    A  L     T   A
Sbjct: 105 ----------RNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHA 154

Query: 193 AWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251
             +TA +  G TVV+FG  G+ G+   + A++ GA  I     +S K +  K FG  E V
Sbjct: 155 L-KTAGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVI----AVSRK-DWLKEFGADEVV 208

Query: 252 NSKNCGDKS 260
           +     +K 
Sbjct: 209 DYDEVEEKV 217

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 66.8 bits (164), Expect = 2e-12
 Identities = 68/285 (23%), Positives = 100/285 (35%), Gaps = 79/285 (27%)

Query: 18  RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV-FPRIL 74
           +A +  + G P    + EV    P   +V VR+  + +   D    +         P IL
Sbjct: 2   KALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAIL 61

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           G +  GVVE+VGE V     GD V            GC                      
Sbjct: 62  GCDVAGVVEAVGEGVTRFRVGDEVY-----------GC---------------------- 88

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLD---IAHVVKVDPTVPPNRACLLSCGVSTGVG 191
                  L+G          S +EY V+D   +A         P N +   +  +     
Sbjct: 89  -AGGLGGLQG----------SLAEYAVVDARLLAL-------KPANLSMREAAALPLVGI 130

Query: 192 AAW----RTANVEVGSTVVIF----GLGSIG--LAVAEGARLCGATRIIGVDVISEKFEI 241
            AW      A V+ G TV+I     G+G +   LA A GAR+  AT        SEK   
Sbjct: 131 TAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVY-AT------ASSEKAAF 183

Query: 242 GKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASL 285
            +  G    +  +     +V + + + T G G D  F+ VG  +L
Sbjct: 184 ARSLGADPIIYYRE----TVVEYVAEHTGGRGFDVVFDTVGGETL 224

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 66.0 bits (162), Expect = 4e-12
 Identities = 78/329 (23%), Positives = 120/329 (36%), Gaps = 58/329 (17%)

Query: 18  RAAIATAPG--EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD----FPAVFP 71
           +A   +  G  + L + E  V  P   EV VR+   SL + D+    + +     P   P
Sbjct: 2   KAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLL---ILNGRYPPPVKDP 58

Query: 72  RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM 131
            I   +  G V +VGE V     GD V+P F  +                        W+
Sbjct: 59  LIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPN------------------------WL 94

Query: 132 --PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVST 188
             P         L G  I         +EY VL    +V+    +    A  L C G++ 
Sbjct: 95  DGPPTAEDEASALGG-PIDGV-----LAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLT- 147

Query: 189 GVGAAWR----TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244
               AW        ++ G TV++ G G + L   + A+  GA R+I      EK E  K 
Sbjct: 148 ----AWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKA 202

Query: 245 FGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL 303
            G    +N +   D    + ++ +T G G D+  E  G  +L Q +      G G   ++
Sbjct: 203 LGADHVINYRTTPD--WGEEVLKLTGGRGVDHVVEVGGPGTLAQ-SIKAVAPG-GVISLI 258

Query: 304 GVDQPGSQLSLSSFEVLHSGKILMGSLFG 332
           G    G +  +    +L  G  L G   G
Sbjct: 259 GF-LSGFEAPVLLLPLLTKGATLRGIAVG 286

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score = 64.5 bits (158), Expect = 2e-11
 Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 9/108 (8%)

Query: 18  RAAIATAPGEPLVIDEVIVDPP---NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL 74
           +A +   PG   V D   V  P   +  +  VRI  T++C SD+  ++     A    +L
Sbjct: 2   KAVVYGGPGNVAVED---VPDPKIEHPTDAIVRITTTAICGSDLHMYR-GRTGAEPGLVL 57

Query: 75  GHEAIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCS 121
           GHEA+G VE VG  V+ +  GD VV+P F   C  C  C+     +C 
Sbjct: 58  GHEAMGEVEEVGSAVESLKVGDRVVVP-FNVACGRCRNCKRGLTGVCL 104

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 63.3 bits (155), Expect = 3e-11
 Identities = 62/272 (22%), Positives = 101/272 (37%), Gaps = 64/272 (23%)

Query: 18  RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF----WKMKDFPAVFP 71
           +A +    G P  LV++EV  +P    EVR+R+    +   D+      +++K  P + P
Sbjct: 2   KAVVCKELGGPEDLVLEEVPPEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVK--PPL-P 58

Query: 72  RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM 131
            + G E  GVVE+VGE V G                                        
Sbjct: 59  FVPGSEVAGVVEAVGEGVTGFKV------------------------------------- 81

Query: 132 PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVG 191
                       G+ +        F+E  V+  A V  +   +    A  L     T   
Sbjct: 82  ------------GDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYH 129

Query: 192 AAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250
           A  R A ++ G TV++ G  G +GLA  + A+  GA R+I      EK  + +  G    
Sbjct: 130 ALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHV 188

Query: 251 VNSKNCGDKSVSQIIIDMTDG-GADYCFECVG 281
           ++     D  + + +  +T G G D  ++ VG
Sbjct: 189 IDY---RDPDLRERVKALTGGRGVDVVYDPVG 217

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 60.8 bits (147), Expect = 3e-10
 Identities = 77/304 (25%), Positives = 128/304 (42%), Gaps = 33/304 (10%)

Query: 42  HEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVV-IP 100
           ++V V+I+   +CHSD+   K     + +P I GHE +G+   VG+NV    EGD V + 
Sbjct: 32  NDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVG 91

Query: 101 HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKD-LRGETIHHFVSVSSFSEY 159
             +  C  C  C     N C    F  +        SR  D  R +          +S+ 
Sbjct: 92  VIIGSCQSCESCNQDLENYCPKVVFTYN--------SRSSDGTRNQ--------GGYSDV 135

Query: 160 TVLDIAHVVKVDPTVPPNR-ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIG-LAV 217
            V+D   V+ +   +P +  A LL  G++      +     E G  + + GLG +G +AV
Sbjct: 136 IVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAV 195

Query: 218 AEGARLCGATRIIGVDVISEK-FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYC 276
             G       R+  +   SEK  E   R G   F+ + +      SQ + +   G  D+ 
Sbjct: 196 KIGKAF--GLRVTVISRSSEKEREAIDRLGADSFLVTTD------SQKMKEAV-GTMDFI 246

Query: 277 FECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA 336
            + V     +   ++  +   GK + LG+  P   L L  F ++   K++ GS  GG+K 
Sbjct: 247 IDTVSAEHALLPLFSLLKVS-GKLVALGL--PEKPLDLPIFPLVLGRKMVGGSQIGGMKE 303

Query: 337 KSDI 340
             ++
Sbjct: 304 TQEM 307

Length = 375

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 59.9 bits (145), Expect = 5e-10
 Identities = 67/246 (27%), Positives = 99/246 (40%), Gaps = 36/246 (14%)

Query: 18  RAAIATAPGEPLVIDEVIVDP--------PNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           R  +   PG+  V D  I  P           H V ++++ T++C SD    + +   A 
Sbjct: 4   RGVVYLGPGKVEVQD--IDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRT-TAP 60

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
              +LGHE  G V   G +V+ +  GD+V   F   C  C  C+     +C      ++P
Sbjct: 61  TGLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVC----LNVNP 116

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR---------AC 180
                    + D+ G        V   SEY ++  A     +    P+R           
Sbjct: 117 ARAGAAYG-YVDMGG-------WVGGQSEYVMVPYA---DFNLLKFPDRDQALEKIRDLT 165

Query: 181 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE 240
           +LS    TG   A  TA V  GSTV I G G +GLA A  A+L GA  +I  D+   +  
Sbjct: 166 MLSDIFPTGYHGAV-TAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLA 224

Query: 241 IGKRFG 246
             + FG
Sbjct: 225 QARSFG 230

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 59.0 bits (144), Expect = 8e-10
 Identities = 66/280 (23%), Positives = 102/280 (36%), Gaps = 82/280 (29%)

Query: 18  RAAIATAPGEPLVI--DEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILG 75
           +A      G P V+  ++V V  P   EV VR     +   D  F +   +P   P +LG
Sbjct: 1   KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYF-RSGLYPLPLPFVLG 59

Query: 76  HEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ 135
            E  GVVE+VG  V G   GD V                       A P           
Sbjct: 60  VEGAGVVEAVGPGVTGFKVGDRV---------------------AYAGPP---------- 88

Query: 136 TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW- 194
                              +++EY V+  + +VK    +P         G+S    AA  
Sbjct: 89  ------------------GAYAEYRVVPASRLVK----LPD--------GISDETAAALL 118

Query: 195 -----------RTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242
                       T  V+ G TV++    G +GL + + A+  GA  +IG     EK E+ 
Sbjct: 119 LQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELA 177

Query: 243 KRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVG 281
           +  G    +N +   D+   + + ++T G G D  ++ VG
Sbjct: 178 RAAGADHVINYR---DEDFVERVREITGGRGVDVVYDGVG 214

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 58.7 bits (142), Expect = 8e-10
 Identities = 55/250 (22%), Positives = 87/250 (34%), Gaps = 30/250 (12%)

Query: 73  ILGHEAIGVVESVGENVDGVVE------GDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 126
           +LGHE +G V ++        +      G  V+      C  C  CR      C      
Sbjct: 1   VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCD----- 55

Query: 127 ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA-HVVKVDPTVPPNRACLLSCG 185
                     S  K         +     ++E+  L     +V V   +P   A    C 
Sbjct: 56  ----------SLRKYGHEALDSGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCA 105

Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245
            +T V AA   A    G  V++ G G +GL  A  A   GA R++  D   ++ E+   F
Sbjct: 106 TAT-VMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSF 164

Query: 246 GVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 304
           G T     +   ++        + +G G D   E  G  + V+        G G  ++ G
Sbjct: 165 GATALAEPEVLAERQGG-----LQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAG 218

Query: 305 VDQPGSQLSL 314
              PG  ++L
Sbjct: 219 SVFPGGPVAL 228

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score = 59.1 bits (144), Expect = 1e-09
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 4/90 (4%)

Query: 192 AAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251
                A V+ G TV +FG G +GL  A  A L GA+R+  VD + E+ ++ +  G    +
Sbjct: 167 HGLELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA-IPI 225

Query: 252 NSKNCGDKSVSQIIIDMTDGGADYCFECVG 281
           +     D    + I+ +  GG D   +CVG
Sbjct: 226 DFS---DGDPVEQILGLEPGGVDRAVDCVG 252

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 58.0 bits (141), Expect = 2e-09
 Identities = 65/291 (22%), Positives = 94/291 (32%), Gaps = 77/291 (26%)

Query: 18  RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDV-----TFWKMKDFPAVF 70
           R  + T  G P  L + E  +  P + EV V++  + +  +DV      +      P   
Sbjct: 2   REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFT- 60

Query: 71  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
           P   G++ +G V+++G  V G   GD V                                
Sbjct: 61  P---GYDLVGRVDALGSGVTGFEVGDRVAA------------------------------ 87

Query: 131 MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGV 190
                                 V   +EY  LD  ++V V   V    A    C V   V
Sbjct: 88  -------------------LTRVGGNAEYINLDAKYLVPVPEGVDAAEA---VCLVLNYV 125

Query: 191 GAAW----RTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245
             A+    R A V  G  V+I G  G +G A+ E A L GA  + G           +  
Sbjct: 126 -TAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAE-VYGTAS-ERNHAALREL 182

Query: 246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKG 296
           G T          K     ++  T GG D  F+ VG  S  +   A    G
Sbjct: 183 GATPIDYR----TKDWLPAML--TPGGVDVVFDGVGGESYEESYAALAPGG 227

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 57.6 bits (140), Expect = 2e-09
 Identities = 57/217 (26%), Positives = 81/217 (37%), Gaps = 50/217 (23%)

Query: 18  RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF--PAVFPRI 73
           RA      G P  L I+E+ V  P + EV +R+    L  +D   ++   +  P   P  
Sbjct: 2   RAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADA-MFRRGAYIEPPPLPAR 60

Query: 74  LGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR 133
           LG+EA GVVE+VG  V G   GD V                            + P    
Sbjct: 61  LGYEAAGVVEAVGAGVTGFAVGDRVS---------------------------VIPAADL 93

Query: 134 DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAA 193
            Q                   +++EY ++  A VVK+   +    A  L     T  GA 
Sbjct: 94  GQ-----------------YGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGAL 136

Query: 194 WRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRI 229
              A +  G +V+I     S+GLA  + A   GAT I
Sbjct: 137 VELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVI 173

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 57.4 bits (139), Expect = 3e-09
 Identities = 51/219 (23%), Positives = 86/219 (39%), Gaps = 24/219 (10%)

Query: 40  NSHEVRVRIICTSLCHSDVTFW---KMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96
           N++   V+I    +C SD+ ++   K+ +F    P +LGHE IG +     +  G+ EG 
Sbjct: 26  NNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSGLKEGQ 83

Query: 97  VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSF 156
            V  +    C  C  C S   N C+   F  S          F  + G           F
Sbjct: 84  TVAINPSKPCGHCKYCLSHNENQCTTMRFFGS-------AMYFPHVDG----------GF 126

Query: 157 SEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA 216
           + Y V+D A  +              +  ++  + AA +  ++  G  V + G+G IG  
Sbjct: 127 TRYKVVDTAQCIPYPEKADEKVMA-FAEPLAVAIHAAHQAGDL-QGKRVFVSGVGPIGCL 184

Query: 217 VAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255
           +    +  GA  I+  DV      + +  G  + VN +N
Sbjct: 185 IVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQN 223

Length = 343

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 54.5 bits (131), Expect = 3e-08
 Identities = 72/295 (24%), Positives = 113/295 (38%), Gaps = 28/295 (9%)

Query: 43  EVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVV-IPH 101
           +V V+I+   +CHSD+   K +     +P + GHE +G+V  +G+NV    EGD V +  
Sbjct: 39  DVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGV 98

Query: 102 FLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTV 161
            +  C  C  C     N C    F  +  +  D T  +                +S+  V
Sbjct: 99  IVGSCKSCESCDQDLENYCPKMIFTYNS-IGHDGTKNY--------------GGYSDMIV 143

Query: 162 LDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIG-LAVAEG 220
           +D   V++    +P +    L C   T           E G  + + GLG +G +AV  G
Sbjct: 144 VDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIG 203

Query: 221 ARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 280
                   +I      E   I  R G   F+ S +      +        G  DY  + V
Sbjct: 204 KAFGLKVTVISSSSNKEDEAI-NRLGADSFLVSTDPEKMKAAI-------GTMDYIIDTV 255

Query: 281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 335
                +       +   GK I LG+  P   L L  F ++   K++ GS  GG+K
Sbjct: 256 SAVHALGPLLGLLKVN-GKLITLGL--PEKPLELPIFPLVLGRKLVGGSDIGGIK 307

Length = 360

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 54.2 bits (131), Expect = 3e-08
 Identities = 63/273 (23%), Positives = 96/273 (35%), Gaps = 60/273 (21%)

Query: 18  RAAIATAPGEPLVIDEVIVDP-PNSHEVRVRIICTSLCHSDVTFWK--MKDFPAVFPRIL 74
           +A +     +  V D  +  P P   E  VR++   +C++D+  +K         FP + 
Sbjct: 2   KALVLDGGLDLRVED--LPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP-----FPGVP 54

Query: 75  GHEAIGVVESVGEN--VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
           GHE +G+VE   E   V   V G++ I      C  C  CR      C           P
Sbjct: 55  GHEFVGIVEEGPEAELVGKRVVGEINIA-----CGRCEYCRRGLYTHC-----------P 98

Query: 133 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVST---- 188
                   D  G          +F+EY  L + ++  V   VP  +A      V      
Sbjct: 99  NRTVLGIVDRDG----------AFAEYLTLPLENLHVVPDLVPDEQA------VFAEPLA 142

Query: 189 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 248
                     +  G  V + G G +GL +A+   L G   ++ V   SEK  + +R GV 
Sbjct: 143 AALEILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVE 201

Query: 249 EFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 281
                      +V     +   GG D   E  G
Sbjct: 202 -----------TVLPDEAESEGGGFDVVVEATG 223

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 53.0 bits (128), Expect = 9e-08
 Identities = 59/290 (20%), Positives = 90/290 (31%), Gaps = 77/290 (26%)

Query: 20  AIATAPGEPLVIDEVIVD----PPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV---FPR 72
            + T  G P V+  + V+     P   EV V++   S+   D    +      +   FP 
Sbjct: 1   VVYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPP 60

Query: 73  ILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
           I G +  G V +VG  V     GD V            G    KG               
Sbjct: 61  IPGMDFAGEVVAVGSGVTRFKVGDEVF-----------GRLPPKG--------------- 94

Query: 133 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGA 192
                      G          + +EY V   + + K    V    A  L     T + A
Sbjct: 95  ----------GG----------ALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQA 134

Query: 193 AWRTANVEVGSTVVIFG----LGSIG--LAVAEGARLCGATRIIGVDVISEKFEIGKRFG 246
                 V+ G  V+I G    +G+    +A A GA       + GV   +   E+ +  G
Sbjct: 135 LRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA------HVTGVC-STRNAELVRSLG 187

Query: 247 VTEFVNSKNCGDKSVSQIIIDMTDGGA--DYCFECVGLASLVQEAYACCR 294
             E ++             + +T GG   D  F+ VG +      Y    
Sbjct: 188 ADEVIDYTTED-------FVALTAGGEKYDVIFDAVGNSPF--SLYRASL 228

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 52.2 bits (126), Expect = 1e-07
 Identities = 52/242 (21%), Positives = 84/242 (34%), Gaps = 59/242 (24%)

Query: 18  RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILG 75
           +A +   PG P  L + E+ +  P    V +R+    L  S++   +       FPR+LG
Sbjct: 2   KAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLG 61

Query: 76  HEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ 135
            EA+G VE           G  V               +  G +   F            
Sbjct: 62  IEAVGEVEEAPGG--TFTPGQRVA--------------TAMGGMGRTFD----------- 94

Query: 136 TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR 195
                              S++EYT++    V  +D  +       L     T  G+ +R
Sbjct: 95  ------------------GSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFR 136

Query: 196 TANVEVGSTVVI------FGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
           +  ++ G T++I       GL ++ LA A GA +   TR        E+  + K  G  E
Sbjct: 137 SLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTR------SPERAALLKELGADE 190

Query: 250 FV 251
            V
Sbjct: 191 VV 192

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 51.2 bits (123), Expect = 3e-07
 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 8/87 (9%)

Query: 18 RAAIATAPGEP---LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD---FPAVFP 71
          RAA+ T  G+P   L I EV    P + EV VR   + + + D+  W ++    +    P
Sbjct: 2  RAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDL--WTIRGTYGYKPELP 59

Query: 72 RILGHEAIGVVESVGENVDGVVEGDVV 98
           I G EA+GVV++VGE V G+  G  V
Sbjct: 60 AIGGSEAVGVVDAVGEGVKGLQVGQRV 86

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 51.1 bits (123), Expect = 3e-07
 Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 9/94 (9%)

Query: 17  CRAAIATAPGEPL----VIDEVIVDPPNSHEVRVRIICTSLCHSDV-----TFWKMKDFP 67
            +A + T  GEP     +    I  P   +EV V+++   +  +D+      +       
Sbjct: 1   AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTT 60

Query: 68  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPH 101
              P + G+E +G V  VG  V  +  GD VIP 
Sbjct: 61  PEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPL 94

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 51.0 bits (122), Expect = 4e-07
 Identities = 75/306 (24%), Positives = 126/306 (41%), Gaps = 40/306 (13%)

Query: 43  EVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVV-IPH 101
           +V +++I   +CH+D+   K     + +P + GHE +G V  VG +V     GD+V +  
Sbjct: 36  DVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGV 95

Query: 102 FLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTV 161
            +  C EC  C+S     C+    +I  W   D  +  K  +G           F+   V
Sbjct: 96  IVGCCGECSPCKSDLEQYCNK---RI--WSYNDVYTDGKPTQG----------GFASAMV 140

Query: 162 LDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGA 221
           +D   VVK+   + P +A  L C   T           + G    I GLG +G    + A
Sbjct: 141 VDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIA 200

Query: 222 RLCGATRIIGVDVIS----EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGG--ADY 275
           +  G      V VIS    ++ E  +  G  +++         VS    +M +     DY
Sbjct: 201 KAMGHH----VTVISSSDKKREEALEHLGADDYL---------VSSDAAEMQEAADSLDY 247

Query: 276 CFECVGLASLVQEAYACCRKGWGKTIVLGV-DQPGSQLSLSSFEVLHSGKILMGSLFGGL 334
             + V +   + E Y    K  GK I++GV + P   L   +  ++   K++ GS  G +
Sbjct: 248 IIDTVPVFHPL-EPYLSLLKLDGKLILMGVINTP---LQFVTPMLMLGRKVITGSFIGSM 303

Query: 335 KAKSDI 340
           K   ++
Sbjct: 304 KETEEM 309

Length = 357

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 50.7 bits (122), Expect = 5e-07
 Identities = 62/272 (22%), Positives = 101/272 (37%), Gaps = 65/272 (23%)

Query: 18  RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILG 75
           RA      G P  L + ++ V  P   EV VR+  + +   D                + 
Sbjct: 2   RAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVP 61

Query: 76  H-EAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
             +  GVVE+VGE VDG+  GD V   +L +    +G   ++G                 
Sbjct: 62  GSDGAGVVEAVGEGVDGLKVGDRV---WLTN----LGWGRRQG----------------- 97

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGA-- 192
                               + +EY V+    +V +   V          G + G+ A  
Sbjct: 98  --------------------TAAEYVVVPADQLVPLPDGVSF------EQGAALGIPALT 131

Query: 193 AWRT----ANVEVGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247
           A+R     A  + G TV++ G  G++G A  + AR  GA R+I     +E  E+ ++ G 
Sbjct: 132 AYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGA 190

Query: 248 TEFVNSKNCGDKSVSQIIIDMTDG-GADYCFE 278
               N +    + ++  I+  T G G D   E
Sbjct: 191 DAVFNYR---AEDLADRILAATAGQGVDVIIE 219

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 50.4 bits (121), Expect = 5e-07
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 7/87 (8%)

Query: 20  AIATAPGEP----LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKM--KDFPAVFPRI 73
            + T  GEP    L +  + + PP   EV VR++   +  SD+          P   P +
Sbjct: 1   VVYTQFGEPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPP-LPAV 59

Query: 74  LGHEAIGVVESVGENVDGVVEGDVVIP 100
            G+E +GVV  VG  V G++ G  V+P
Sbjct: 60  PGNEGVGVVVEVGSGVSGLLVGQRVLP 86

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score = 43.8 bits (104), Expect = 8e-05
 Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 10/136 (7%)

Query: 151 VSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW---RTANVEVGSTVVI 207
           V VS + EY + D   + K+DP+  P  A L   G+  G+ A +        + G TVV+
Sbjct: 98  VGVSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGM-PGLTAYFGLLDIGQPKAGETVVV 156

Query: 208 FGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVTEFVNSKNCGDKSVSQII 265
               G++G  V + A+L G  R++G+   +EK +      G    ++ K    +  +Q +
Sbjct: 157 SAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYK---AEDFAQAL 212

Query: 266 IDMTDGGADYCFECVG 281
            +    G D  FE VG
Sbjct: 213 KEACPKGIDVYFENVG 228

Length = 340

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 40/170 (23%), Positives = 59/170 (34%), Gaps = 32/170 (18%)

Query: 61  WKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLC 120
                    FPRI G + +G V +VGE VD    G+ V+                     
Sbjct: 68  AGWWGGTLSFPRIQGADIVGRVVAVGEGVDTARIGERVL--------------------- 106

Query: 121 SAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRAC 180
                 + P +         D+    I        F+EYTV+   +   V+  +      
Sbjct: 107 ------VDPSIRDPPEDDPADID--YIGSERD-GGFAEYTVVPAENAYPVNSPLSDVELA 157

Query: 181 LLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRI 229
              C  ST      R A V  G TV++ G  G +G A+ + A+  GA  I
Sbjct: 158 TFPCSYSTAENMLER-AGVGAGETVLVTGASGGVGSALVQLAKRRGAIVI 206

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 41.1 bits (97), Expect = 6e-04
 Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 10/82 (12%)

Query: 18 RAAIATAPGEPLVIDEVIVDP-----PNSHEVRVRIICTSLCHSDVTFWKMK---DFPAV 69
          +A +    G+PL + E+ +       P   EV +++    +  SD+ F  +K        
Sbjct: 2  KALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGF--LKGQYGSTKA 59

Query: 70 FPRILGHEAIGVVESVGENVDG 91
           P   G E  G V + G     
Sbjct: 60 LPVPPGFEGSGTVVAAGGGPLA 81

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|240625 cd05300, 2-Hacid_dh_1, Putative D-isomer specific 2-hydroxyacid dehydrogenase

 Score = 41.0 bits (97), Expect = 6e-04
 Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGV 232
           G TV+I GLG IG  +A  A+  G  R+IGV
Sbjct: 134 GKTVLIVGLGDIGREIARRAKAFGM-RVIGV 163

2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomains but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Formate dehydrogenase (FDH) catalyzes the NAD+-dependent oxidation of formate ion to carbon dioxide with the concomitant reduction of NAD+ to NADH. FDHs of this family contain no metal ions or prosthetic groups. Catalysis occurs though direct transfer of the hydride ion to NAD+ without the stages of acid-base catalysis typically found in related dehydrogenases. FDHs are found in all methylotrophic microorganisms in energy production and in the stress responses of plants. Length = 313

>gnl|CDD|176200 cd08238, sorbose_phosphate_red, L-sorbose-1-phosphate reductase

 Score = 40.9 bits (96), Expect = 7e-04
 Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 7/61 (11%)

Query: 38 PPNSHEVRVRIICTSLCHSDVTFWKM-KDFPAVF------PRILGHEAIGVVESVGENVD 90
               E+ VR+I  SLC S         D   V       P ILGHE  G +  VG+   
Sbjct: 23 EIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKKWQ 82

Query: 91 G 91
          G
Sbjct: 83 G 83

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 410

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 58/245 (23%), Positives = 84/245 (34%), Gaps = 58/245 (23%)

Query: 39  PNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRI-LGHEAIGVVESVGENVDGVVEGDV 97
           P   EV V+     +  SD+ F   +  P V P    G E +G V +VGE V     GD 
Sbjct: 28  PGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVTDFKVGDA 87

Query: 98  VIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFS 157
           V                                                    +S  +F+
Sbjct: 88  VA--------------------------------------------------TMSFGAFA 97

Query: 158 EYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTV-VIFGLGSIGLA 216
           EY V+   H V V P + P    LL  G++  + A      ++ G TV V    G  G  
Sbjct: 98  EYQVVPARHAVPV-PELKPEVLPLLVSGLTASI-ALEEVGEMKSGETVLVTAAAGGTGQF 155

Query: 217 VAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYC 276
             + A+L G   +IG     EK E  K  G    +N K    + + +++      G D  
Sbjct: 156 AVQLAKLAGCH-VIGTCSSDEKAEFLKSLGCDRPINYKT---EDLGEVLKKEYPKGVDVV 211

Query: 277 FECVG 281
           +E VG
Sbjct: 212 YESVG 216

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score = 39.9 bits (93), Expect = 0.001
 Identities = 33/97 (34%), Positives = 42/97 (43%), Gaps = 3/97 (3%)

Query: 28  PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL-GHEAIGVVESVG 86
           PL   E  V  P   E+ VR+    +C +D+   +  D P   PR+  GHE +G V   G
Sbjct: 14  PLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSE-GDLPVHRPRVTPGHEVVGEVAGRG 72

Query: 87  ENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSA 122
            +  G   GD V I      C  C  CR    NLC A
Sbjct: 73  ADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPA 109

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 9/88 (10%)

Query: 18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPR--- 72
          RA      G    L I E     P  ++V +++    +  +D    + K  P   P    
Sbjct: 3  RAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPP---PPGSS 59

Query: 73 -ILGHEAIGVVESVGENVDGVVEGDVVI 99
           ILG E  G VE VG +V    EGD V+
Sbjct: 60 EILGLEVAGYVEDVGSDVKRFKEGDRVM 87

Length = 334

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 39.3 bits (93), Expect = 0.002
 Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 5/85 (5%)

Query: 18 RAAIATAPGEP--LVIDEVIVDP-PNSHEVRVRIICTSLCHSDVTFWKMK-DFPAVFPRI 73
          +A +   PG P  L + EV   P P   EV +R+    +  +D+   +     P     I
Sbjct: 2  KAIVIKEPGGPEVLELGEV-PKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDI 60

Query: 74 LGHEAIGVVESVGENVDGVVEGDVV 98
          LG E  GVV +VG  V G   GD V
Sbjct: 61 LGLEVAGVVVAVGPGVTGWKVGDRV 85

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 39.0 bits (92), Expect = 0.002
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 31 IDEVIVDP-PNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV 89
          ID  +  P P   ++ VR+   S+   D             P+ILG +A GVVE+VG  V
Sbjct: 19 IDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEV 78

Query: 90 DGVVEGDVV 98
               GD V
Sbjct: 79 TLFKVGDEV 87

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	362
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.98
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.98
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.98
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.97
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.97
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.97
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.96
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.96
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.96
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.94
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.94
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.89
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.83
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.8
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.4
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.28
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	98.55
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.51
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.4
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.3
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.3
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.18
PLN02494	477	adenosylhomocysteinase	98.15
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.12
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.1
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	98.03
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	97.95
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.83
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.81
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.78
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.76
PRK08324	681	short chain dehydrogenase; Validated	97.73
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.67
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.54
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.47
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.4
PRK05693	274	short chain dehydrogenase; Provisional	97.38
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.38
PRK05993	277	short chain dehydrogenase; Provisional	97.32
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	97.31
PRK06182	273	short chain dehydrogenase; Validated	97.31
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.27
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.25
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.22
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.15
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	97.13
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.08
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.06
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	97.03
PRK06139	330	short chain dehydrogenase; Provisional	97.01
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	96.98
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	96.94
PRK07109	334	short chain dehydrogenase; Provisional	96.92
PRK05872	296	short chain dehydrogenase; Provisional	96.9
PRK07825	273	short chain dehydrogenase; Provisional	96.9
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.89
PLN03209	576	translocon at the inner envelope of chloroplast su	96.87
PRK07326	237	short chain dehydrogenase; Provisional	96.84
PRK08265	261	short chain dehydrogenase; Provisional	96.83
PRK12742	237	oxidoreductase; Provisional	96.83
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	96.81
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.79
TIGR00438	188	rrmJ cell division protein FtsJ.	96.78
PRK08339	263	short chain dehydrogenase; Provisional	96.77
PRK07806	248	short chain dehydrogenase; Provisional	96.75
PRK08177	225	short chain dehydrogenase; Provisional	96.74
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	96.74
PRK12939	250	short chain dehydrogenase; Provisional	96.74
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.69
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	96.69
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	96.66
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.66
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.65
PRK07576	264	short chain dehydrogenase; Provisional	96.64
PRK08017	256	oxidoreductase; Provisional	96.62
PRK06180	277	short chain dehydrogenase; Provisional	96.62
PRK04148	134	hypothetical protein; Provisional	96.6
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	96.6
PRK12828	239	short chain dehydrogenase; Provisional	96.55
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.54
PRK07063	260	short chain dehydrogenase; Provisional	96.54
PRK07062	265	short chain dehydrogenase; Provisional	96.5
PRK06949	258	short chain dehydrogenase; Provisional	96.48
PRK06057	255	short chain dehydrogenase; Provisional	96.48
PRK08267	260	short chain dehydrogenase; Provisional	96.48
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.48
PRK08589	272	short chain dehydrogenase; Validated	96.48
PRK08628	258	short chain dehydrogenase; Provisional	96.47
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	96.47
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.46
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.46
PRK08263	275	short chain dehydrogenase; Provisional	96.44
PRK07523	255	gluconate 5-dehydrogenase; Provisional	96.43
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.42
PRK06500	249	short chain dehydrogenase; Provisional	96.42
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	96.41
PRK06484	520	short chain dehydrogenase; Validated	96.41
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	96.41
PRK06179	270	short chain dehydrogenase; Provisional	96.41
PRK07060	245	short chain dehydrogenase; Provisional	96.41
PRK08618	325	ornithine cyclodeaminase; Validated	96.4
PRK07832	272	short chain dehydrogenase; Provisional	96.39
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.36
PRK08085	254	gluconate 5-dehydrogenase; Provisional	96.35
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	96.35
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	96.34
PRK12829	264	short chain dehydrogenase; Provisional	96.33
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.33
PRK07890	258	short chain dehydrogenase; Provisional	96.31
PRK09242	257	tropinone reductase; Provisional	96.3
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	96.3
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.29
PRK06181	263	short chain dehydrogenase; Provisional	96.29
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.29
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.28
PRK05866	293	short chain dehydrogenase; Provisional	96.28
PRK09186	256	flagellin modification protein A; Provisional	96.28
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.27
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.27
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.26
PRK06101	240	short chain dehydrogenase; Provisional	96.24
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.24
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	96.23
PRK06128	300	oxidoreductase; Provisional	96.22
PRK06841	255	short chain dehydrogenase; Provisional	96.22
PRK07831	262	short chain dehydrogenase; Provisional	96.2
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	96.19
PRK06398	258	aldose dehydrogenase; Validated	96.19
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	96.19
PRK07814	263	short chain dehydrogenase; Provisional	96.18
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.16
PRK05867	253	short chain dehydrogenase; Provisional	96.15
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.14
PRK14967	223	putative methyltransferase; Provisional	96.13
PRK06124	256	gluconate 5-dehydrogenase; Provisional	96.12
CHL00194	317	ycf39 Ycf39; Provisional	96.11
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.05
PRK06196	315	oxidoreductase; Provisional	96.05
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	96.03
PRK10538	248	malonic semialdehyde reductase; Provisional	96.03
PRK07677	252	short chain dehydrogenase; Provisional	96.01
PRK12937	245	short chain dehydrogenase; Provisional	96.0
PRK07985	294	oxidoreductase; Provisional	96.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	95.99
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	95.98
PRK07904	253	short chain dehydrogenase; Provisional	95.98
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	95.97
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	95.97
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	95.93
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.93
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	95.93
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	95.92
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	95.91
PRK09291	257	short chain dehydrogenase; Provisional	95.91
PRK07478	254	short chain dehydrogenase; Provisional	95.9
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	95.9
PRK06953	222	short chain dehydrogenase; Provisional	95.87
COG2910	211	Putative NADH-flavin reductase [General function p	95.84
PRK08340	259	glucose-1-dehydrogenase; Provisional	95.83
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	95.82
PLN02780	320	ketoreductase/ oxidoreductase	95.81
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	95.79
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	95.79
PRK07340	304	ornithine cyclodeaminase; Validated	95.79
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.76
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.75
PRK07574	385	formate dehydrogenase; Provisional	95.74
PRK06484	520	short chain dehydrogenase; Validated	95.74
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.74
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.73
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.73
PRK05875	276	short chain dehydrogenase; Provisional	95.7
PRK09072	263	short chain dehydrogenase; Provisional	95.7
PRK07454	241	short chain dehydrogenase; Provisional	95.7
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.69
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	95.69
PRK05854	313	short chain dehydrogenase; Provisional	95.67
PRK06940	275	short chain dehydrogenase; Provisional	95.67
PRK05717	255	oxidoreductase; Validated	95.66
PRK07402	196	precorrin-6B methylase; Provisional	95.66
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	95.64
PRK06194	287	hypothetical protein; Provisional	95.64
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	95.63
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.61
PRK08643	256	acetoin reductase; Validated	95.61
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	95.61
PRK06138	252	short chain dehydrogenase; Provisional	95.6
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	95.6
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.59
PRK06701	290	short chain dehydrogenase; Provisional	95.59
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	95.56
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.55
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	95.54
PRK08219	227	short chain dehydrogenase; Provisional	95.54
PRK06197	306	short chain dehydrogenase; Provisional	95.53
PLN03139	386	formate dehydrogenase; Provisional	95.53
PRK07774	250	short chain dehydrogenase; Provisional	95.52
PLN02366	308	spermidine synthase	95.52
PRK07035	252	short chain dehydrogenase; Provisional	95.52
PRK11207	197	tellurite resistance protein TehB; Provisional	95.51
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	95.51
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.49
PRK07024	257	short chain dehydrogenase; Provisional	95.49
PRK08277	278	D-mannonate oxidoreductase; Provisional	95.48
PRK12747	252	short chain dehydrogenase; Provisional	95.48
PRK06125	259	short chain dehydrogenase; Provisional	95.48
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	95.47
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	95.44
PRK08862	227	short chain dehydrogenase; Provisional	95.43
PRK06198	260	short chain dehydrogenase; Provisional	95.43
PRK08703	239	short chain dehydrogenase; Provisional	95.41
PRK06172	253	short chain dehydrogenase; Provisional	95.41
PRK00811	283	spermidine synthase; Provisional	95.4
PRK08213	259	gluconate 5-dehydrogenase; Provisional	95.4
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	95.38
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.38
PRK08251	248	short chain dehydrogenase; Provisional	95.36
PRK06483	236	dihydromonapterin reductase; Provisional	95.35
PRK12743	256	oxidoreductase; Provisional	95.35
PRK12548	289	shikimate 5-dehydrogenase; Provisional	95.32
PRK07453	322	protochlorophyllide oxidoreductase; Validated	95.32
PRK13243	333	glyoxylate reductase; Reviewed	95.32
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.31
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	95.31
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.31
PRK07067	257	sorbitol dehydrogenase; Provisional	95.31
PLN02253	280	xanthoxin dehydrogenase	95.3
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.29
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	95.29
PRK08317	241	hypothetical protein; Provisional	95.29
PRK06482	276	short chain dehydrogenase; Provisional	95.27
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.27
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.27
PRK07074	257	short chain dehydrogenase; Provisional	95.26
PRK05884	223	short chain dehydrogenase; Provisional	95.26
PRK05855	582	short chain dehydrogenase; Validated	95.25
PRK06914	280	short chain dehydrogenase; Provisional	95.23
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.22
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.2
PRK08226	263	short chain dehydrogenase; Provisional	95.17
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.16
PRK05650	270	short chain dehydrogenase; Provisional	95.16
PRK05876	275	short chain dehydrogenase; Provisional	95.16
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.13
PRK08264	238	short chain dehydrogenase; Validated	95.13
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.11
COG0673	342	MviM Predicted dehydrogenases and related proteins	95.11
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.11
PRK06720	169	hypothetical protein; Provisional	95.09
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.09
PRK07417	279	arogenate dehydrogenase; Reviewed	95.09
PRK12938	246	acetyacetyl-CoA reductase; Provisional	95.08
PF13823	23	ADH_N_assoc: Alcohol dehydrogenase GroES-associate	95.07
PRK06114	254	short chain dehydrogenase; Provisional	95.06
PRK12367	245	short chain dehydrogenase; Provisional	95.05
PRK07856	252	short chain dehydrogenase; Provisional	95.05
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.05
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.04
COG4122	219	Predicted O-methyltransferase [General function pr	95.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	94.98
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	94.96
PLN00203	519	glutamyl-tRNA reductase	94.96
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	94.96
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	94.96
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	94.93
PRK12746	254	short chain dehydrogenase; Provisional	94.92
PF01209	233	Ubie_methyltran: ubiE/COQ5 methyltransferase famil	94.9
PLN03075	296	nicotianamine synthase; Provisional	94.89
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	94.87
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	94.87
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	94.86
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	94.84
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	94.83
PRK08328	231	hypothetical protein; Provisional	94.81
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	94.81
PRK06719	157	precorrin-2 dehydrogenase; Validated	94.81
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	94.8
PRK07577	234	short chain dehydrogenase; Provisional	94.76
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	94.76
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	94.73
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	94.73
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	94.73
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	94.72
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	94.69
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	94.64
PRK11579	346	putative oxidoreductase; Provisional	94.62
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	94.61
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	94.61
PLN02233	261	ubiquinone biosynthesis methyltransferase	94.58
PRK07069	251	short chain dehydrogenase; Validated	94.58
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	94.57
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	94.56
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	94.56
PRK07578	199	short chain dehydrogenase; Provisional	94.56
PRK06141	314	ornithine cyclodeaminase; Validated	94.53
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	94.52
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	94.51
PRK07097	265	gluconate 5-dehydrogenase; Provisional	94.51
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	94.49
PLN00016	378	RNA-binding protein; Provisional	94.49
PRK07775	274	short chain dehydrogenase; Provisional	94.48
PRK12824	245	acetoacetyl-CoA reductase; Provisional	94.47
PRK10669	558	putative cation:proton antiport protein; Provision	94.46
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	94.43
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	94.41
PRK07791	286	short chain dehydrogenase; Provisional	94.4
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	94.39
PRK01581	374	speE spermidine synthase; Validated	94.39
KOG0725	270	consensus Reductases with broad range of substrate	94.39
COG0569	225	TrkA K+ transport systems, NAD-binding component [	94.38
PLN02928	347	oxidoreductase family protein	94.37
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	94.35
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	94.34
PRK13403	335	ketol-acid reductoisomerase; Provisional	94.34
PLN02476	278	O-methyltransferase	94.34
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	94.32
PRK08303	305	short chain dehydrogenase; Provisional	94.32
PRK04457	262	spermidine synthase; Provisional	94.32
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	94.32
COG0499	420	SAM1 S-adenosylhomocysteine hydrolase [Coenzyme me	94.32
PRK07041	230	short chain dehydrogenase; Provisional	94.29
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	94.28
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	94.26
PLN02256	304	arogenate dehydrogenase	94.26
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.25
PRK07102	243	short chain dehydrogenase; Provisional	94.25
PRK06523	260	short chain dehydrogenase; Provisional	94.25
PRK03562	621	glutathione-regulated potassium-efflux system prot	94.24
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	94.24
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	94.23
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.23
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	94.22
PRK12480	330	D-lactate dehydrogenase; Provisional	94.21
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	94.2
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	94.2
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.18
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	94.17
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	94.17
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	94.16
PLN02244	340	tocopherol O-methyltransferase	94.16
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.15
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	94.12
PRK10206	344	putative oxidoreductase; Provisional	94.1
PRK03659	601	glutathione-regulated potassium-efflux system prot	94.1
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	94.07
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	94.04
PRK07023	243	short chain dehydrogenase; Provisional	94.03
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	94.02
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	94.01
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	93.99
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	93.97
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.97
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	93.97
TIGR03215	285	ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati	93.95
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	93.94
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	93.93
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	93.93
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	93.93
PRK00536	262	speE spermidine synthase; Provisional	93.9
PRK06849	389	hypothetical protein; Provisional	93.9
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	93.9
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	93.88
PRK08278	273	short chain dehydrogenase; Provisional	93.86
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.86
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	93.82
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	93.82
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	93.81
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	93.79
TIGR02371	325	ala_DH_arch alanine dehydrogenase, Archaeoglobus f	93.78
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	93.78
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	93.74
PRK14903	431	16S rRNA methyltransferase B; Provisional	93.73
PRK04266	226	fibrillarin; Provisional	93.7
PRK09135	249	pteridine reductase; Provisional	93.66
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	93.63
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	93.61
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.59
PRK06436	303	glycerate dehydrogenase; Provisional	93.54
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	93.49
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	93.49
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	93.43
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	93.4
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.39
TIGR02415	254	23BDH acetoin reductases. One member of this famil	93.38
PRK06932	314	glycerate dehydrogenase; Provisional	93.36
PF01564	246	Spermine_synth: Spermine/spermidine synthase; Inte	93.34

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=1.4e-61  Score=448.09  Aligned_cols=308  Identities=29%  Similarity=0.444  Sum_probs=289.1

Q ss_pred             cceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCC
Q 018022           14 PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVV   93 (362)
Q Consensus        14 ~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~   93 (362)
                      +++|||+++.++++++++++++.|+|+++||+|+|+|+|||++|++.+.|..+...+|++||||.+|+|+++|++|++||
T Consensus         1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k   80 (339)
T COG1064           1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK   80 (339)
T ss_pred             CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence            46899999999999999999999999999999999999999999999999999888999999999999999999999999


Q ss_pred             CCCEEEe-eCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCC
Q 018022           94 EGDVVIP-HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP  172 (362)
Q Consensus        94 ~Gd~V~~-~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~  172 (362)
                      +||||.+ +...+|++|++|++++.++|++...   .|++.+|                   +|+||+++++.+++++|+
T Consensus        81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~---~gy~~~G-------------------Gyaeyv~v~~~~~~~iP~  138 (339)
T COG1064          81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKI---TGYTTDG-------------------GYAEYVVVPARYVVKIPE  138 (339)
T ss_pred             CCCEEEecCccCCCCCCccccCcccccCCCccc---cceeecC-------------------cceeEEEEchHHeEECCC
Confidence            9999999 9999999999999999999999887   7888888                   999999999999999999


Q ss_pred             CCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022          173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN  252 (362)
Q Consensus       173 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~  252 (362)
                      ++++++||.+.|+..|.|+++ +..+++||++|+|.|+|++|.+++|+|+++|+ +|++++++++|++.++++|++++++
T Consensus       139 ~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~  216 (339)
T COG1064         139 GLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVIN  216 (339)
T ss_pred             CCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEE
Confidence            999999999999999999986 55999999999999999999999999999997 9999999999999999999999999


Q ss_pred             CCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeecc
Q 018022          253 SKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG  332 (362)
Q Consensus       253 ~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~  332 (362)
                      ..+   ++..+.+++.    +|++||+++ +..++.+++.|+++ |+++++|.........++...++.+++++.|+..+
T Consensus       217 ~~~---~~~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g  287 (339)
T COG1064         217 SSD---SDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVG  287 (339)
T ss_pred             cCC---chhhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecC
Confidence            776   6777777764    999999999 88899999999998 99999998532344568888899999999999887


Q ss_pred             CCCccccHHHHHHHHHcCCccccee
Q 018022          333 GLKAKSDIPILLKRYMDKWSYVPFS  357 (362)
Q Consensus       333 ~~~~~~~l~~~l~~~~~g~l~~~~~  357 (362)
                      +   +.|+++++++..+|+++|.+.
T Consensus       288 ~---~~d~~e~l~f~~~g~Ikp~i~  309 (339)
T COG1064         288 T---RADLEEALDFAAEGKIKPEIL  309 (339)
T ss_pred             C---HHHHHHHHHHHHhCCceeeEE
Confidence            6   699999999999999999995

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=9.8e-60  Score=427.08  Aligned_cols=336  Identities=43%  Similarity=0.760  Sum_probs=321.6

Q ss_pred             ceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 018022           15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE   94 (362)
Q Consensus        15 ~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~   94 (362)
                      |++||++++++++||+++++.+++|++|||+||+.++|+|++|...++|..|.. +|.++|||.+|+|++||++|+++++
T Consensus         1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp   79 (366)
T COG1062           1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP   79 (366)
T ss_pred             CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence            578999999999999999999999999999999999999999999999998877 9999999999999999999999999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022           95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (362)
Q Consensus        95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l  174 (362)
                      ||+|+....-.|++|.+|.+++.|+|.....+.+.|...||.++|+ ..|..+.|+++.++|+||.++++.+++++++..
T Consensus        80 GDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls-~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~  158 (366)
T COG1062          80 GDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLS-GNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA  158 (366)
T ss_pred             CCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeee-cCCcceeeeeccccchhheeecccceEECCCCC
Confidence            9999999999999999999999999998888888999999999999 888899999999999999999999999999999


Q ss_pred             CccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  254 (362)
Q Consensus       175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~  254 (362)
                      +++.++++.|...|.+.+..+.+++++|++|.|+|.|.+|++++|-|+..|+.+||+++.+++|++++++||+++++|++
T Consensus       159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~  238 (366)
T COG1062         159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK  238 (366)
T ss_pred             CccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCCc-cHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccC
Q 018022          255 NCGDK-SVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG  333 (362)
Q Consensus       255 ~~~~~-~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  333 (362)
                      +   . ++.+.+.+++++|+|++|||+|+...+++++.++.++ |+.+++|.....+.+++++..+... .+|.|+++++
T Consensus       239 ~---~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~-G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs~~G~  313 (366)
T COG1062         239 E---VDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRG-GTSVIIGVAGAGQEISTRPFQLVTG-RVWKGSAFGG  313 (366)
T ss_pred             h---hhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcC-CeEEEEecCCCCceeecChHHeecc-ceEEEEeecC
Confidence            7   4 6999999999999999999999999999999999995 9999999988888888998888885 9999999999


Q ss_pred             CCccccHHHHHHHHHcCCccccee
Q 018022          334 LKAKSDIPILLKRYMDKWSYVPFS  357 (362)
Q Consensus       334 ~~~~~~l~~~l~~~~~g~l~~~~~  357 (362)
                      ...+.|++++++++.+|+|++.-.
T Consensus       314 ~~p~~diP~lv~~y~~Gkl~~d~l  337 (366)
T COG1062         314 ARPRSDIPRLVDLYMAGKLPLDRL  337 (366)
T ss_pred             CccccchhHHHHHHHcCCCchhHH
Confidence            999999999999999999987543

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.5e-58  Score=411.43  Aligned_cols=346  Identities=53%  Similarity=0.909  Sum_probs=326.4

Q ss_pred             CCCcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCC
Q 018022           11 AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVD   90 (362)
Q Consensus        11 ~~~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~   90 (362)
                      ..++.++||++.+++++||.+||+.+++|+.+||+||++++++|++|...+.|..+...+|.++|||++|+|+.+|.+|+
T Consensus         2 ~gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~   81 (375)
T KOG0022|consen    2 AGKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVT   81 (375)
T ss_pred             CCCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCcc
Confidence            45788999999999999999999999999999999999999999999999999987788999999999999999999999


Q ss_pred             CCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCC-CCCCCccccccCCceecccccccceeeeEEeecCceEE
Q 018022           91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (362)
Q Consensus        91 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~  169 (362)
                      +|++||+|+......|+.|.+|.++..|+|.......+.+. ..||.+||+ --|+.+.|+++..+|+||.+++...+++
T Consensus        82 ~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~-~~gk~iyHfmg~StFsEYTVv~~~~v~k  160 (375)
T KOG0022|consen   82 TVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFT-CKGKPIYHFMGTSTFSEYTVVDDISVAK  160 (375)
T ss_pred             ccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeee-eCCCceEEecccccceeEEEeecceeEe
Confidence            99999999999999999999999999999999888865455 469999999 8899999999999999999999999999


Q ss_pred             cCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE
Q 018022          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE  249 (362)
Q Consensus       170 ~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~  249 (362)
                      +++..+++.++++.|.+.|+|.+.++.+++++|+++.|+|.|.+|+++++-||+.|+.+||++|.|++|.+.+++||+++
T Consensus       161 Id~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe  240 (375)
T KOG0022|consen  161 IDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATE  240 (375)
T ss_pred             cCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 018022          250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS  329 (362)
Q Consensus       250 vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  329 (362)
                      .+|+.+ ......+.+++++++|+|+.|||+|+.+++++++.++..+||+-+++|.....+.+++.++.++. +.++.|+
T Consensus       241 ~iNp~d-~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~-GR~~~Gs  318 (375)
T KOG0022|consen  241 FINPKD-LKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVT-GRTWKGS  318 (375)
T ss_pred             ecChhh-ccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhcc-ccEEEEE
Confidence            999984 33458899999999999999999999999999999999999999999998888899999988877 9999999


Q ss_pred             eccCCCccccHHHHHHHHHcCCcccceecc
Q 018022          330 LFGGLKAKSDIPILLKRYMDKWSYVPFSGT  359 (362)
Q Consensus       330 ~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~  359 (362)
                      .++.++.+++++.+++.+.++++++...-+
T Consensus       319 ~FGG~K~~~~iP~lV~~y~~~~l~ld~~IT  348 (375)
T KOG0022|consen  319 AFGGFKSKSDIPKLVKDYMKKKLNLDEFIT  348 (375)
T ss_pred             ecccccchhhhhHHHHHHHhCccchhhhhh
Confidence            999999999999999999999998765433

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.4e-54  Score=390.22  Aligned_cols=313  Identities=26%  Similarity=0.411  Sum_probs=278.5

Q ss_pred             ceeeEEEeccCCCceEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhhcCCCC---CCCCccccccceEEEEEeCCCCC
Q 018022           15 IQCRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVD   90 (362)
Q Consensus        15 ~~~ka~~~~~~~~~l~l~~~~~p~~-~~~eVlVkv~~~~i~~~d~~~~~g~~~~---~~~p~~~G~e~~G~Vv~vG~~v~   90 (362)
                      ..|+|+++.++++ ++++++|.|++ .|+||+|++.++|||+||+++|......   .+.|+++|||.+|+|+++|+.|+
T Consensus         3 ~~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk   81 (354)
T KOG0024|consen    3 ADNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK   81 (354)
T ss_pred             cccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence            4699999999999 99999999987 9999999999999999999999877654   35799999999999999999999


Q ss_pred             CCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCC-CCCCCccccccCCceecccccccceeeeEEeecCceEE
Q 018022           91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (362)
Q Consensus        91 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~  169 (362)
                      ++|+||||++.|..+|..|.+|++++||+|+...|.   +. ..+|                   ++++|++.+++++++
T Consensus        82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~---atpp~~G-------------------~la~y~~~~~dfc~K  139 (354)
T KOG0024|consen   82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFC---ATPPVDG-------------------TLAEYYVHPADFCYK  139 (354)
T ss_pred             ccccCCeEEecCCCccccchhhhCcccccCCccccc---cCCCcCC-------------------ceEEEEEechHheee
Confidence            999999999999999999999999999999999983   22 3455                   999999999999999


Q ss_pred             cCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE
Q 018022          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE  249 (362)
Q Consensus       170 ~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~  249 (362)
                      ||++++++++|++. +++++|++. +++++++|++|||+|||++|+.+...|+++|+.+|++++..+.|+++++++|++.
T Consensus       140 LPd~vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~  217 (354)
T KOG0024|consen  140 LPDNVSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATV  217 (354)
T ss_pred             CCCCCchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeE
Confidence            99999999999999 799999985 8899999999999999999999999999999999999999999999999999998


Q ss_pred             EEcCCCCC-CccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEE
Q 018022          250 FVNSKNCG-DKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM  327 (362)
Q Consensus       250 vv~~~~~~-~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~  327 (362)
                      +.+..... .+++.+.+.+..+. .+|++|||+|....++.++..++.+ |++++.|+-  ....+++..++..|++.+.
T Consensus       218 ~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g--~~~~~fpi~~v~~kE~~~~  294 (354)
T KOG0024|consen  218 TDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMG--AEEIQFPIIDVALKEVDLR  294 (354)
T ss_pred             EeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccC--CCccccChhhhhhheeeee
Confidence            77655411 13344555555554 6999999999999999999999998 999999873  3567899999999999999


Q ss_pred             EeeccCCCccccHHHHHHHHHcCCcccceec
Q 018022          328 GSLFGGLKAKSDIPILLKRYMDKWSYVPFSG  358 (362)
Q Consensus       328 g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~~  358 (362)
                      |++-+   ...+++.+++++++|++++...-
T Consensus       295 g~fry---~~~~y~~ai~li~sGki~~k~lI  322 (354)
T KOG0024|consen  295 GSFRY---CNGDYPTAIELVSSGKIDVKPLI  322 (354)
T ss_pred             eeeee---ccccHHHHHHHHHcCCcCchhhe
Confidence            99733   25699999999999999887543

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=9.2e-53  Score=377.50  Aligned_cols=323  Identities=26%  Similarity=0.385  Sum_probs=288.8

Q ss_pred             CCCCcceeeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCC
Q 018022           10 TAGKPIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGE   87 (362)
Q Consensus        10 ~~~~~~~~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~   87 (362)
                      +...|.+++++.+..++..  +++.+++.|+|+++||+|+|+|+|||++|++.+.|..+..++|+++|||.+|+|+++|+
T Consensus         3 ~~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs   82 (360)
T KOG0023|consen    3 SMSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGS   82 (360)
T ss_pred             cccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECC
Confidence            3457888999999999984  66699999999999999999999999999999999998899999999999999999999


Q ss_pred             CCCCCCCCCEE-EeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCc
Q 018022           88 NVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH  166 (362)
Q Consensus        88 ~v~~~~~Gd~V-~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~  166 (362)
                      +|++|++|||| +-+-..+|.+|++|..+..++|++..++ ..|...||              +...|+|++|+++++.+
T Consensus        83 ~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t-~~g~~~DG--------------t~~~ggf~~~~~v~~~~  147 (360)
T KOG0023|consen   83 NVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFT-YNGVYHDG--------------TITQGGFQEYAVVDEVF  147 (360)
T ss_pred             CcccccccCeeeeeEEeccccCccccccCCcccCCceeEe-ccccccCC--------------CCccCccceeEEEeeee
Confidence            99999999999 5566788999999999999999975443 46777888              66678999999999999


Q ss_pred             eEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc-hHHHHHHhc
Q 018022          167 VVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-EKFEIGKRF  245 (362)
Q Consensus       167 ~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~-~~~~~~~~~  245 (362)
                      ++++|+++++++||.+.|+..|.|..| ...++.||+++.|.|+|++|.+++|+||++|. +|+++++.+ .|.+.++.+
T Consensus       148 a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~L  225 (360)
T KOG0023|consen  148 AIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSL  225 (360)
T ss_pred             EEECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhc
Confidence            999999999999999999999999986 77888999999999997799999999999999 999999988 566677789


Q ss_pred             CCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcE
Q 018022          246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKI  325 (362)
Q Consensus       246 g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~  325 (362)
                      |++.+++..+  ++++.+++.+.+++++|.+.+.  ....++.++.+++.+ |++|++|.. .. ++.++...+..+.+.
T Consensus       226 GAd~fv~~~~--d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p-~~-~~~~~~~~lil~~~~  298 (360)
T KOG0023|consen  226 GADVFVDSTE--DPDIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLP-EK-PLKLDTFPLILGRKS  298 (360)
T ss_pred             CcceeEEecC--CHHHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCc-CC-cccccchhhhcccEE
Confidence            9999998874  3899999999988888888876  556689999999998 999999984 33 788999999999999


Q ss_pred             EEEeeccCCCccccHHHHHHHHHcCCcccceecc
Q 018022          326 LMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGT  359 (362)
Q Consensus       326 i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~  359 (362)
                      |.|+..++.   .+.+++|++..++.+++++..+
T Consensus       299 I~GS~vG~~---ket~E~Ldf~a~~~ik~~IE~v  329 (360)
T KOG0023|consen  299 IKGSIVGSR---KETQEALDFVARGLIKSPIELV  329 (360)
T ss_pred             EEeeccccH---HHHHHHHHHHHcCCCcCceEEE
Confidence            999999984   7889999999999988887643

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=2.7e-50  Score=388.90  Aligned_cols=338  Identities=35%  Similarity=0.587  Sum_probs=284.9

Q ss_pred             eeEEEeccCCC--------ceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCC
Q 018022           17 CRAAIATAPGE--------PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGEN   88 (362)
Q Consensus        17 ~ka~~~~~~~~--------~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~   88 (362)
                      |||+++.++|+        .++++++|.|+|+++||+|||.+++||++|++.+.|..+ ..+|.++|||++|+|+++|++
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~   79 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG   79 (371)
T ss_pred             CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence            79999998763        389999999999999999999999999999999988653 356899999999999999999


Q ss_pred             CCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceE
Q 018022           89 VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVV  168 (362)
Q Consensus        89 v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~  168 (362)
                      +++|++||||++.+..+|+.|..|+.+++++|++.......|...+|...+....+.. .+..+.|+|+||+.++.++++
T Consensus        80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~-~~~~g~G~~aey~~v~~~~~~  158 (371)
T cd08281          80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEI-NHHLGVSAFAEYAVVSRRSVV  158 (371)
T ss_pred             CCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCccc-ccccCcccceeeEEecccceE
Confidence            9999999999998888999999999999999988654322332222211110000000 001123599999999999999


Q ss_pred             EcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc
Q 018022          169 KVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT  248 (362)
Q Consensus       169 ~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~  248 (362)
                      ++|+++++++++++++.+.|||+++.+..++++|++|||.|+|++|++++|+|+.+|+++|++++++++|+++++++|++
T Consensus       159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~  238 (371)
T cd08281         159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGAT  238 (371)
T ss_pred             ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCc
Confidence            99999999999999989999999887888999999999999999999999999999997799999999999999999999


Q ss_pred             EEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEE
Q 018022          249 EFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMG  328 (362)
Q Consensus       249 ~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g  328 (362)
                      +++++.+   +++.+.+++++++++|++|||+|....+..+++.++++ |+++.+|.......++++...++.|++++.|
T Consensus       239 ~~i~~~~---~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g  314 (371)
T cd08281         239 ATVNAGD---PNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKG  314 (371)
T ss_pred             eEeCCCc---hhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEE
Confidence            9999877   77888888887668999999999887799999999997 9999999754334567888889999999999


Q ss_pred             eeccCCCccccHHHHHHHHHcCCcccc--eeccc
Q 018022          329 SLFGGLKAKSDIPILLKRYMDKWSYVP--FSGTR  360 (362)
Q Consensus       329 ~~~~~~~~~~~l~~~l~~~~~g~l~~~--~~~~~  360 (362)
                      ++.+.+...++++++++++++|++++.  ++.+|
T Consensus       315 ~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~  348 (371)
T cd08281         315 SYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRL  348 (371)
T ss_pred             EecCCCChHHHHHHHHHHHHcCCCCchhheeeee
Confidence            988766556789999999999999863  45444

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=4e-50  Score=388.98  Aligned_cols=349  Identities=49%  Similarity=0.878  Sum_probs=284.0

Q ss_pred             CCCCcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCC
Q 018022           10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGEN   88 (362)
Q Consensus        10 ~~~~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~   88 (362)
                      +.++|++|||+++.++++++.+++++.|.|+++||+|||.++|||++|++.+.|..+. ..+|.++|||++|+|+++|++
T Consensus         4 ~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~   83 (381)
T PLN02740          4 TQGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEG   83 (381)
T ss_pred             ccccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCC
Confidence            3467889999999999877899999999999999999999999999999999887532 457999999999999999999


Q ss_pred             CCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCC-CCCCCCcccccc-CCceecccccccceeeeEEeecCc
Q 018022           89 VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW-MPRDQTSRFKDL-RGETIHHFVSVSSFSEYTVLDIAH  166 (362)
Q Consensus        89 v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g-~~~~g~~~~~~~-~~~~~~~~~~~g~~a~y~~v~~~~  166 (362)
                      +++|++||||++.+..+|+.|..|+.++++.|++....+..+ ...+|..++... .+....+....|+|+||++++.++
T Consensus        84 v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~  163 (381)
T PLN02740         84 VEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSAC  163 (381)
T ss_pred             CCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHH
Confidence            999999999999999999999999999999999866421110 000110000000 000001112246999999999999


Q ss_pred             eEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC
Q 018022          167 VVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG  246 (362)
Q Consensus       167 ~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g  246 (362)
                      ++++|++++.++++.+.+++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|
T Consensus       164 ~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~G  243 (381)
T PLN02740        164 VVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMG  243 (381)
T ss_pred             eEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcC
Confidence            99999999999999999999999998778889999999999999999999999999999967999999999999999999


Q ss_pred             CcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEE
Q 018022          247 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKIL  326 (362)
Q Consensus       247 ~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i  326 (362)
                      +++++++++ ...++.+.+++++++++|++||++|.+..+..++.++++++|+++.+|.......++++...++ +++++
T Consensus       244 a~~~i~~~~-~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~-~~~~i  321 (381)
T PLN02740        244 ITDFINPKD-SDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELF-DGRSI  321 (381)
T ss_pred             CcEEEeccc-ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHh-cCCeE
Confidence            999998765 1124778888877668999999999988899999999883399999998543333455554444 68999


Q ss_pred             EEeeccCCCccccHHHHHHHHHcCCccc--ceeccc
Q 018022          327 MGSLFGGLKAKSDIPILLKRYMDKWSYV--PFSGTR  360 (362)
Q Consensus       327 ~g~~~~~~~~~~~l~~~l~~~~~g~l~~--~~~~~~  360 (362)
                      .|++.+.+....+++++++++.+|++++  .++.+|
T Consensus       322 ~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~  357 (381)
T PLN02740        322 TGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHEL  357 (381)
T ss_pred             EEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEe
Confidence            9998776655578999999999999876  355554

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=1.5e-49  Score=381.85  Aligned_cols=330  Identities=32%  Similarity=0.550  Sum_probs=281.8

Q ss_pred             eeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022           16 QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (362)
Q Consensus        16 ~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G   95 (362)
                      +|||+++++++++++++++|.|+|+++||+|||.+++||++|+..+.|..+ ..+|.++|||++|+|+++|+++++|++|
T Consensus         1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G   79 (358)
T TIGR03451         1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPG   79 (358)
T ss_pred             CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccCCC
Confidence            599999999998899999999999999999999999999999999888643 3478999999999999999999999999


Q ss_pred             CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCC-CCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR-DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (362)
Q Consensus        96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~-~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l  174 (362)
                      |+|++.+..+|+.|..|..++.++|...... ...... +|         ...+.....|+|+||+.+++++++++|+++
T Consensus        80 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~-~~~~~~~~g---------~~~~~~~~~G~~aey~~v~~~~~~~ip~~~  149 (358)
T TIGR03451        80 DYVVLNWRAVCGQCRACKRGRPWYCFDTHNA-TQKMTLTDG---------TELSPALGIGAFAEKTLVHAGQCTKVDPAA  149 (358)
T ss_pred             CEEEEccCCCCCCChHHhCcCcccCcCcccc-ccccccccC---------cccccccccccccceEEEehhheEECCCCC
Confidence            9999999999999999999999999753210 000000 01         000001123599999999999999999999


Q ss_pred             CccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  254 (362)
Q Consensus       175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~  254 (362)
                      ++++++++.+.+.++|+++.+...+++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|+++++++.
T Consensus       150 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~  229 (358)
T TIGR03451       150 DPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSS  229 (358)
T ss_pred             ChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCC
Confidence            99999999989999998877888899999999999999999999999999996799999999999999999999999987


Q ss_pred             CCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccC
Q 018022          255 NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG  333 (362)
Q Consensus       255 ~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  333 (362)
                      +   .++.+.+.+.+++ ++|++|||+|++..++.+++.++++ |+++.+|........++++..++.+++++.+++.+.
T Consensus       230 ~---~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  305 (358)
T TIGR03451       230 G---TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGD  305 (358)
T ss_pred             C---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCC
Confidence            6   6788888888887 8999999999987799999999997 999999985433346678778888999999987654


Q ss_pred             CCccccHHHHHHHHHcCCcccc--eeccc
Q 018022          334 LKAKSDIPILLKRYMDKWSYVP--FSGTR  360 (362)
Q Consensus       334 ~~~~~~l~~~l~~~~~g~l~~~--~~~~~  360 (362)
                      ....++++++++++++|+|++.  ++.+|
T Consensus       306 ~~~~~~~~~~~~l~~~g~l~~~~~i~~~~  334 (358)
T TIGR03451       306 CLPERDFPMLVDLYLQGRLPLDAFVTERI  334 (358)
T ss_pred             CCcHHHHHHHHHHHHcCCCCchheEEEEe
Confidence            4346789999999999999763  56655

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=1.6e-48  Score=376.00  Aligned_cols=341  Identities=44%  Similarity=0.804  Sum_probs=278.0

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd   96 (362)
                      |||+++..+++.++++++|.|+|.++||+|||.+++||++|++.+.|..+...+|.++|||++|+|+++|+++++|++||
T Consensus         2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd   81 (368)
T TIGR02818         2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD   81 (368)
T ss_pred             ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence            89999999887799999999999999999999999999999999988765556799999999999999999999999999


Q ss_pred             EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 018022           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP  176 (362)
Q Consensus        97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~  176 (362)
                      ||++.+..+|++|.+|+.++.++|.+.......|...+|..++. ..|....+..+.|+|+||+.+|.++++++|+++++
T Consensus        82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~  160 (368)
T TIGR02818        82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFS-KDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPL  160 (368)
T ss_pred             EEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccc-cCCCcccccccCccceeeEEechhheEECCCCCCH
Confidence            99999999999999999999999987543222233222211100 00000001112369999999999999999999999


Q ss_pred             cchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCC
Q 018022          177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC  256 (362)
Q Consensus       177 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~  256 (362)
                      ++++++++++.+||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++++++.+ 
T Consensus       161 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~-  239 (368)
T TIGR02818       161 EEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPND-  239 (368)
T ss_pred             HHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccc-
Confidence            9999999999999998878889999999999999999999999999999978999999999999999999999998763 


Q ss_pred             CCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCCc
Q 018022          257 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA  336 (362)
Q Consensus       257 ~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  336 (362)
                      ...++.+.+++++++++|++|||+|++..+..+++++++++|+++.+|.......++++...++. +..+.|++.+....
T Consensus       240 ~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~  318 (368)
T TIGR02818       240 YDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVT-GRVWRGSAFGGVKG  318 (368)
T ss_pred             cchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhc-cceEEEeeccCCCc
Confidence            12456677888776689999999998877899999998733999999985433344555555554 55678876654444


Q ss_pred             cccHHHHHHHHHcCCcccc--eeccc
Q 018022          337 KSDIPILLKRYMDKWSYVP--FSGTR  360 (362)
Q Consensus       337 ~~~l~~~l~~~~~g~l~~~--~~~~~  360 (362)
                      +.+++++++++++|++++.  ++.+|
T Consensus       319 ~~~~~~~~~~~~~g~i~~~~~it~~~  344 (368)
T TIGR02818       319 RTELPGIVEQYMKGEIALDDFVTHTM  344 (368)
T ss_pred             HHHHHHHHHHHHCCCCCchhheeEEe
Confidence            5789999999999998653  55554

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=2.8e-48  Score=374.39  Aligned_cols=342  Identities=45%  Similarity=0.845  Sum_probs=281.6

Q ss_pred             eeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022           16 QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (362)
Q Consensus        16 ~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G   95 (362)
                      +|||+++.+++++++++++|.|.|+++||+|||++++||++|+..+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vG   81 (368)
T cd08300           2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPG   81 (368)
T ss_pred             cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCC
Confidence            69999999888779999999999999999999999999999999998876655789999999999999999999999999


Q ss_pred             CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (362)
Q Consensus        96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~  175 (362)
                      |+|+..+..+|+.|.+|+.++++.|++.....+.|...+|..++. ..|....+..+.|+|+||+.++.+.++++|++++
T Consensus        82 drV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~  160 (368)
T cd08300          82 DHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFS-CKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP  160 (368)
T ss_pred             CEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccc-cCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence            999999999999999999999999987653222233222211110 0010111112246999999999999999999999


Q ss_pred             ccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCC
Q 018022          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN  255 (362)
Q Consensus       176 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~  255 (362)
                      +++++++++++.+||+++.+...+++|++|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|+++++++++
T Consensus       161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~  240 (368)
T cd08300         161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD  240 (368)
T ss_pred             hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence            99999999899999998878889999999999999999999999999999977999999999999999999999998875


Q ss_pred             CCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCC
Q 018022          256 CGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK  335 (362)
Q Consensus       256 ~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  335 (362)
                       .++++.+.+++++++++|++||++|+...+..+++++++++|+++.+|...+...+.++...++. +..+.|+..+.+.
T Consensus       241 -~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~  318 (368)
T cd08300         241 -HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVT-GRVWKGTAFGGWK  318 (368)
T ss_pred             -cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhh-cCeEEEEEecccC
Confidence             11257788888877689999999998877999999998733999999975332334455554544 5677887776666


Q ss_pred             ccccHHHHHHHHHcCCcccc--eeccc
Q 018022          336 AKSDIPILLKRYMDKWSYVP--FSGTR  360 (362)
Q Consensus       336 ~~~~l~~~l~~~~~g~l~~~--~~~~~  360 (362)
                      .+++++++++++++|+|++.  ++.+|
T Consensus       319 ~~~~~~~~~~~~~~g~l~~~~~i~~~~  345 (368)
T cd08300         319 SRSQVPKLVEDYMKGKIKVDEFITHTM  345 (368)
T ss_pred             cHHHHHHHHHHHHcCCCChhhceeeeE
Confidence            67889999999999999864  55554

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=2.2e-48  Score=375.32  Aligned_cols=343  Identities=51%  Similarity=0.921  Sum_probs=282.5

Q ss_pred             ceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 018022           15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE   94 (362)
Q Consensus        15 ~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~   94 (362)
                      |+|||+++.++++++++++++.|+|+++||+|||.+++||++|+..+.|..+...+|.++|||++|+|+++|+++++|++
T Consensus         1 ~~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~   80 (369)
T cd08301           1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKP   80 (369)
T ss_pred             CccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCcccc
Confidence            47999999998877999999999999999999999999999999999887665677999999999999999999999999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCC-CCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR-DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~-~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      ||||++.+..+|++|..|..++++.|.+.......|... ++...+. ..|....+....|+|+||+.++..+++++|++
T Consensus        81 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~  159 (369)
T cd08301          81 GDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFS-INGKPIYHFVGTSTFSEYTVVHVGCVAKINPE  159 (369)
T ss_pred             CCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccc-cCCcceeeeeccccceeEEEEecccEEECCCC
Confidence            999999999999999999999999999865321122211 1100000 00000001112368999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  253 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~  253 (362)
                      +++++++++++.+.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|++.++++
T Consensus       160 ~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~  239 (369)
T cd08301         160 APLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNP  239 (369)
T ss_pred             CCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcc
Confidence            99999999998999999988888899999999999999999999999999998789999999999999999999999987


Q ss_pred             CCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccC
Q 018022          254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG  333 (362)
Q Consensus       254 ~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  333 (362)
                      .+ ..+++.+.+++++++++|++||++|....+..+++++++++|+++.+|.......+++++..++ +++++.|++.+.
T Consensus       240 ~~-~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~  317 (369)
T cd08301         240 KD-HDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLL-NGRTLKGTLFGG  317 (369)
T ss_pred             cc-cchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHh-cCCeEEEEecCC
Confidence            64 1134667788777668999999999987789999999992289999998654345566655554 689999998877


Q ss_pred             CCccccHHHHHHHHHcCCcccc--eeccc
Q 018022          334 LKAKSDIPILLKRYMDKWSYVP--FSGTR  360 (362)
Q Consensus       334 ~~~~~~l~~~l~~~~~g~l~~~--~~~~~  360 (362)
                      +..+++++++++++.+|++++.  ++.+|
T Consensus       318 ~~~~~~~~~~~~~~~~g~~~~~~~i~~~~  346 (369)
T cd08301         318 YKPKTDLPNLVEKYMKKELELEKFITHEL  346 (369)
T ss_pred             CChHHHHHHHHHHHHcCCCCcHHheeeee
Confidence            7656789999999999998764  45444

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=1.6e-48  Score=372.42  Aligned_cols=312  Identities=28%  Similarity=0.355  Sum_probs=263.1

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCc-cccccceEEEEEeCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPR-ILGHEAIGVVESVGENVDGVVEG   95 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~-~~G~e~~G~Vv~vG~~v~~~~~G   95 (362)
                      |+|++++.++...++++.+.|.+.++||+|||.++|||+||++.+.+..+..+.|. ++|||++|+|+++| .++.+++|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G   79 (350)
T COG1063           1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG   79 (350)
T ss_pred             CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence            67888888776455888888878999999999999999999999999877766666 99999999999999 77889999


Q ss_pred             CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCC--CCCCCCCCccccccCCceecccccccceeeeEEeecCceEE-cCC
Q 018022           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKIS--PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK-VDP  172 (362)
Q Consensus        96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~--~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~-~P~  172 (362)
                      |||++.|..+|++|.+|+.++++.|++..+...  .+...+|                   +|+||+.+|.++.+. +|+
T Consensus        80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G-------------------~~aEyv~vp~~~~~~~~pd  140 (350)
T COG1063          80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDG-------------------GFAEYVRVPADFNLAKLPD  140 (350)
T ss_pred             CEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCC-------------------ceEEEEEeccccCeecCCC
Confidence            999999999999999999999999996654211  1111344                   999999999755555 588


Q ss_pred             CCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcEEE
Q 018022          173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFV  251 (362)
Q Consensus       173 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~vv  251 (362)
                      +++.+.+++.. +++++|++.......+++++|+|+|+|++|++++++++..|+.+||+++.+++|++++++ .+++.++
T Consensus       141 ~~~~~~aal~e-pla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~  219 (350)
T COG1063         141 GIDEEAAALTE-PLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVV  219 (350)
T ss_pred             CCChhhhhhcC-hhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEee
Confidence            88555555555 999998875566666677799999999999999999999999999999999999999999 6677777


Q ss_pred             cCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEee
Q 018022          252 NSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL  330 (362)
Q Consensus       252 ~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~  330 (362)
                      +..+   ++....+.+++++ ++|++|||+|.+.+++++++.++++ |+++++|.+..... .++...++.|++++.|++
T Consensus       220 ~~~~---~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~  294 (350)
T COG1063         220 NPSE---DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSL  294 (350)
T ss_pred             cCcc---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEecc
Confidence            7665   4678888899988 9999999999999999999999998 99999999754433 677888999999999985


Q ss_pred             ccCCCccccHHHHHHHHHcCCcccce
Q 018022          331 FGGLKAKSDIPILLKRYMDKWSYVPF  356 (362)
Q Consensus       331 ~~~~~~~~~l~~~l~~~~~g~l~~~~  356 (362)
                      ..  ....+++.+++++++|++++..
T Consensus       295 ~~--~~~~~~~~~~~ll~~g~i~~~~  318 (350)
T COG1063         295 RP--SGREDFERALDLLASGKIDPEK  318 (350)
T ss_pred             CC--CCcccHHHHHHHHHcCCCChhH
Confidence            32  2357899999999999999873

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.7e-47  Score=370.02  Aligned_cols=338  Identities=47%  Similarity=0.873  Sum_probs=275.0

Q ss_pred             ceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 018022           15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE   94 (362)
Q Consensus        15 ~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~   94 (362)
                      ..|||+++.++++.++++++|.|+|+++||+|||.++|||++|+..+.+..   .+|.++|||++|+|+++|+++++|++
T Consensus        11 ~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~~   87 (378)
T PLN02827         11 ITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFEK   87 (378)
T ss_pred             ceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccCC
Confidence            469999999988669999999999999999999999999999999887642   46889999999999999999999999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCC-CCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR-DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~-~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      ||+|++.+..+|++|.+|+.+++++|++.... ..|... ++...+. ..|....++-..|+|+||+.+|...++++|++
T Consensus        88 GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~~~~~~-~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~  165 (378)
T PLN02827         88 GDHVLTVFTGECGSCRHCISGKSNMCQVLGLE-RKGVMHSDQKTRFS-IKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPL  165 (378)
T ss_pred             CCEEEEecCCCCCCChhhhCcCcccccCcccc-ccccccCCCccccc-ccCcccccccccccceeeEEechhheEECCCC
Confidence            99999999999999999999999999874321 011100 0000000 00000000001259999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  253 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~  253 (362)
                      +++++++.+.+.+.++|+++.+..++++|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++|+++++++
T Consensus       166 l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~  245 (378)
T PLN02827        166 APLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINP  245 (378)
T ss_pred             CCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcc
Confidence            99999999888889999877777889999999999999999999999999999779999999999999999999999987


Q ss_pred             CCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCH-HHHHhcCcEEEEeecc
Q 018022          254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS-FEVLHSGKILMGSLFG  332 (362)
Q Consensus       254 ~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~~~i~g~~~~  332 (362)
                      ++ .++++.+.+++++++++|++||++|.+..+..+++.+++++|+++.+|.....  ..+++ ..++.+++++.|++.+
T Consensus       246 ~~-~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~--~~~~~~~~~~~~~~~i~g~~~~  322 (378)
T PLN02827        246 ND-LSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK--PEVSAHYGLFLSGRTLKGSLFG  322 (378)
T ss_pred             cc-cchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC--ccccccHHHHhcCceEEeeecC
Confidence            64 11357777888776689999999999877899999999933999999985432  33433 3577789999999877


Q ss_pred             CCCccccHHHHHHHHHcCCccc--ceeccc
Q 018022          333 GLKAKSDIPILLKRYMDKWSYV--PFSGTR  360 (362)
Q Consensus       333 ~~~~~~~l~~~l~~~~~g~l~~--~~~~~~  360 (362)
                      .+....+++++++++++|+|++  .++.+|
T Consensus       323 ~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~  352 (378)
T PLN02827        323 GWKPKSDLPSLVDKYMNKEIMIDEFITHNL  352 (378)
T ss_pred             CCchhhhHHHHHHHHHcCCCChHHheEEEe
Confidence            6655678999999999999998  566665

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=1.5e-47  Score=365.04  Aligned_cols=310  Identities=27%  Similarity=0.392  Sum_probs=270.5

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVEG   95 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~~G   95 (362)
                      |||+++.+++. +++++++.|+|+++||+|||.+++||++|+..+.+.+.. ..+|.++|||++|+|+++|+++++|++|
T Consensus         1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   79 (339)
T cd08239           1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG   79 (339)
T ss_pred             CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence            79999998876 999999999999999999999999999999988776432 3358999999999999999999999999


Q ss_pred             CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (362)
Q Consensus        96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~  175 (362)
                      |+|++.+..+|+.|..|+.+++++|.+...  .+|...+|                   +|+||+.++.++++++|++++
T Consensus        80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~~g~~~~G-------------------~~ae~~~v~~~~~~~~P~~~~  138 (339)
T cd08239          80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRA--AYGWNRDG-------------------GHAEYMLVPEKTLIPLPDDLS  138 (339)
T ss_pred             CEEEECCCCCCCCChhhhCcCcccCcCccc--ccccCCCC-------------------cceeEEEechHHeEECCCCCC
Confidence            999999999999999999999999987653  23444445                   999999999999999999999


Q ss_pred             ccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCC
Q 018022          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN  255 (362)
Q Consensus       176 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~  255 (362)
                      +++++++++++.|||+++ ...++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|+++++++++
T Consensus       139 ~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~  217 (339)
T cd08239         139 FADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ  217 (339)
T ss_pred             HHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc
Confidence            999999999999999986 6678899999999999999999999999999955999999999999999999999999876


Q ss_pred             CCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccC-HHHHHhcCcEEEEeeccC
Q 018022          256 CGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLS-SFEVLHSGKILMGSLFGG  333 (362)
Q Consensus       256 ~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~-~~~~~~~~~~i~g~~~~~  333 (362)
                         .+ .+.+.+++++ ++|++|||+|+...+..+++.++++ |+++++|... ..  +++ ...++.+++++.|++.+.
T Consensus       218 ---~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~--~~~~~~~~~~~~~~i~g~~~~~  289 (339)
T cd08239         218 ---DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGG-EL--TIEVSNDLIRKQRTLIGSWYFS  289 (339)
T ss_pred             ---ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCC-Cc--ccCcHHHHHhCCCEEEEEecCC
Confidence               55 6777777777 8999999999988778999999997 9999999743 22  233 346778999999987653


Q ss_pred             CCccccHHHHHHHHHcCCccc--ceeccc
Q 018022          334 LKAKSDIPILLKRYMDKWSYV--PFSGTR  360 (362)
Q Consensus       334 ~~~~~~l~~~l~~~~~g~l~~--~~~~~~  360 (362)
                         .++++++++++++|++++  .++.+|
T Consensus       290 ---~~~~~~~~~~~~~g~i~~~~~i~~~~  315 (339)
T cd08239         290 ---VPDMEECAEFLARHKLEVDRLVTHRF  315 (339)
T ss_pred             ---HHHHHHHHHHHHcCCCChhHeEEEEe
Confidence               478999999999999875  455544

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=5.1e-47  Score=365.27  Aligned_cols=340  Identities=48%  Similarity=0.883  Sum_probs=282.1

Q ss_pred             ceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 018022           15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE   94 (362)
Q Consensus        15 ~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~   94 (362)
                      +.|||+++.+.++.++++++|.|.++++||+|||.+++||++|++.+.|..+ ..+|.++|||++|+|+++|++++++++
T Consensus         1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~   79 (365)
T cd08277           1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKP   79 (365)
T ss_pred             CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCC
Confidence            4689999998887799999999999999999999999999999999988654 467899999999999999999999999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022           95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (362)
Q Consensus        95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l  174 (362)
                      ||+|+..+..+|++|..|..++.++|++.... ..|...++..++.. .|+...+..+.|+|+||+.++.++++++|+++
T Consensus        80 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~~~~~~~~~~-~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l  157 (365)
T cd08277          80 GDKVIPLFIGQCGECSNCRSGKTNLCQKYRAN-ESGLMPDGTSRFTC-KGKKIYHFLGTSTFSQYTVVDENYVAKIDPAA  157 (365)
T ss_pred             CCEEEECCCCCCCCCchhcCcCcccCcCcccc-ccccccCCcccccc-CCcccccccccccceeeEEEchhheEECCCCC
Confidence            99999999999999999999999999986542 22333333222211 01111112234699999999999999999999


Q ss_pred             CccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  254 (362)
Q Consensus       175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~  254 (362)
                      ++++++++++++.|||+++.+..++++|++|+|+|+|++|++++|+|+.+|+++|++++++++|++.++++|++++++++
T Consensus       158 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~  237 (365)
T cd08277         158 PLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPK  237 (365)
T ss_pred             CHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccc
Confidence            99999999999999999877888999999999999999999999999999997899999999999999999999999876


Q ss_pred             CCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCC
Q 018022          255 NCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL  334 (362)
Q Consensus       255 ~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  334 (362)
                      + ...++.+.+++++++++|++||++|....+..+++++++++|+++.+|... ....++++..++. ++++.|++++.+
T Consensus       238 ~-~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~-~~~~~~~~~~~~~-~~~i~g~~~~~~  314 (365)
T cd08277         238 D-SDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPP-GAELSIRPFQLIL-GRTWKGSFFGGF  314 (365)
T ss_pred             c-ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCC-ccccccCHhHHhh-CCEEEeeecCCC
Confidence            5 112456777777766899999999988778999999987339999999853 2345666666665 899999988776


Q ss_pred             CccccHHHHHHHHHcCCccc--ceeccc
Q 018022          335 KAKSDIPILLKRYMDKWSYV--PFSGTR  360 (362)
Q Consensus       335 ~~~~~l~~~l~~~~~g~l~~--~~~~~~  360 (362)
                      ..+.++++++++++++++++  .++.+|
T Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~  342 (365)
T cd08277         315 KSRSDVPKLVSKYMNKKFDLDELITHVL  342 (365)
T ss_pred             ChHHHHHHHHHHHHCCCcChhHheeeEE
Confidence            55678999999999998764  455554

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-47  Score=362.96  Aligned_cols=307  Identities=21%  Similarity=0.333  Sum_probs=259.4

Q ss_pred             cceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhh-cCCC--CCCCCccccccceEEEEEeCCCCC
Q 018022           14 PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDF--PAVFPRILGHEAIGVVESVGENVD   90 (362)
Q Consensus        14 ~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~-g~~~--~~~~p~~~G~e~~G~Vv~vG~~v~   90 (362)
                      ...+||++++++++ +++++++.| +.++||||||.++|||++|++.+. |...  ...+|.++|||++|+|+++  +++
T Consensus         2 ~~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~   77 (343)
T PRK09880          2 QVKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSS   77 (343)
T ss_pred             cccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCc
Confidence            35689999999988 999999987 689999999999999999999875 3322  2357999999999999999  688


Q ss_pred             CCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCC-----CCCCCccccccCCceecccccccceeeeEEeecC
Q 018022           91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-----PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA  165 (362)
Q Consensus        91 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~-----~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~  165 (362)
                      +|++||||++.+..+|+.|.+|..+++++|++..+   .|.     ..+                   |+|+||++++++
T Consensus        78 ~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~~~~~~-------------------G~~aey~~v~~~  135 (343)
T PRK09880         78 GLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRF---FGSAMYFPHVD-------------------GGFTRYKVVDTA  135 (343)
T ss_pred             cCCCCCEEEECCCCCCcCChhhcCCChhhCCCcce---eecccccCCCC-------------------CceeeeEEechH
Confidence            99999999999999999999999999999988654   221     123                   499999999999


Q ss_pred             ceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc
Q 018022          166 HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF  245 (362)
Q Consensus       166 ~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~  245 (362)
                      .++++|++++++++++.. ++++||+++ ......+|++|+|+|+|++|++++|+|+++|+++|++++++++|+++++++
T Consensus       136 ~~~~~P~~l~~~~aa~~~-~~~~a~~al-~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~l  213 (343)
T PRK09880        136 QCIPYPEKADEKVMAFAE-PLAVAIHAA-HQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREM  213 (343)
T ss_pred             HeEECCCCCCHHHHHhhc-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHc
Confidence            999999999988766544 778999986 455667899999999999999999999999997899999999999999999


Q ss_pred             CCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcE
Q 018022          246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKI  325 (362)
Q Consensus       246 g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~  325 (362)
                      |+++++++++   +++.+.. +. .+++|++|||+|.+..++.+++.++++ |+++.+|...  ...++++..++.|+++
T Consensus       214 Ga~~vi~~~~---~~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~k~~~  285 (343)
T PRK09880        214 GADKLVNPQN---DDLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGG--APPEFPMMTLIVKEIS  285 (343)
T ss_pred             CCcEEecCCc---ccHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCC--CCCccCHHHHHhCCcE
Confidence            9999999876   4544322 22 236999999999987789999999997 9999999743  2356788888899999


Q ss_pred             EEEeeccCCCccccHHHHHHHHHcCCccc--ceeccc
Q 018022          326 LMGSLFGGLKAKSDIPILLKRYMDKWSYV--PFSGTR  360 (362)
Q Consensus       326 i~g~~~~~~~~~~~l~~~l~~~~~g~l~~--~~~~~~  360 (362)
                      +.|++..    .++++++++++++|+|++  .++.+|
T Consensus       286 i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~  318 (343)
T PRK09880        286 LKGSFRF----TEEFNTAVSWLANGVINPLPLLSAEY  318 (343)
T ss_pred             EEEEeec----cccHHHHHHHHHcCCCCchhheEEEE
Confidence            9998642    478999999999999986  344444

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=1.4e-47  Score=361.78  Aligned_cols=293  Identities=25%  Similarity=0.324  Sum_probs=260.0

Q ss_pred             eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcC-CCCCCCCccccccceEEEEEeCCCCCCCC
Q 018022           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK-DFPAVFPRILGHEAIGVVESVGENVDGVV   93 (362)
Q Consensus        17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~-~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~   93 (362)
                      |||+++...+.+  ++++++|.|+|+++||||||.++|||+.|...+.|. .+..++|++||.|++|+|+++|++|++|+
T Consensus         1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~   80 (326)
T COG0604           1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK   80 (326)
T ss_pred             CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence            789999998866  889999999999999999999999999999999987 33457899999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      +||||+..+ ..|                          .+                   |+|+||+.+|++.++++|++
T Consensus        81 ~GdrV~~~~-~~~--------------------------~~-------------------G~~AEy~~v~a~~~~~~P~~  114 (326)
T COG0604          81 VGDRVAALG-GVG--------------------------RD-------------------GGYAEYVVVPADWLVPLPDG  114 (326)
T ss_pred             CCCEEEEcc-CCC--------------------------CC-------------------CcceeEEEecHHHceeCCCC
Confidence            999998653 000                          12                   49999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN  252 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~  252 (362)
                      +++++||++++++.|||+++....++++|++|||+|+ |++|.+++|+||++|+ .++++.+++++.++++++|++++++
T Consensus       115 ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~  193 (326)
T COG0604         115 LSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVIN  193 (326)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEc
Confidence            9999999999999999999999899999999999986 9999999999999998 6666666778777999999999999


Q ss_pred             CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022          253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF  331 (362)
Q Consensus       253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  331 (362)
                      +++   +++.+.+++++++ ++|+|||++|++. +..++++|+++ |+++.+|...+....+++...++.+++...|...
T Consensus       194 y~~---~~~~~~v~~~t~g~gvDvv~D~vG~~~-~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~  268 (326)
T COG0604         194 YRE---EDFVEQVRELTGGKGVDVVLDTVGGDT-FAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTL  268 (326)
T ss_pred             CCc---ccHHHHHHHHcCCCCceEEEECCCHHH-HHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEecc
Confidence            988   7899999999999 9999999999987 88899999998 9999999864345667778888888999999876


Q ss_pred             cCC---CccccHHHHHHHHHcCCcccceecccC
Q 018022          332 GGL---KAKSDIPILLKRYMDKWSYVPFSGTRA  361 (362)
Q Consensus       332 ~~~---~~~~~l~~~l~~~~~g~l~~~~~~~~~  361 (362)
                      ...   ...+.++++.+++++|+|++.++.+|.
T Consensus       269 ~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~  301 (326)
T COG0604         269 GSRDPEALAEALAELFDLLASGKLKPVIDRVYP  301 (326)
T ss_pred             eecchHHHHHHHHHHHHHHHcCCCcceeccEec
Confidence            644   124668889999999999999998763

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=2.7e-46  Score=359.47  Aligned_cols=313  Identities=23%  Similarity=0.325  Sum_probs=264.4

Q ss_pred             CCcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCC
Q 018022           12 GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG   91 (362)
Q Consensus        12 ~~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~   91 (362)
                      .-||+++++.+.+..+.+++.+++.|+|+++||+|||.++|||++|++.+.|..+...+|.++|||++|+|+++|+++++
T Consensus         8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~   87 (360)
T PLN02586          8 EHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKK   87 (360)
T ss_pred             hchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCc
Confidence            46788888888888777999999999999999999999999999999999876554567999999999999999999999


Q ss_pred             CCCCCEEEeeCC-CCCCCCccccCCCCCCCCCCCCCC-C---CCCCCCCCccccccCCceecccccccceeeeEEeecCc
Q 018022           92 VVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKI-S---PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH  166 (362)
Q Consensus        92 ~~~Gd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~-~---~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~  166 (362)
                      |++||+|++.+. .+|++|.+|+.+++++|++..+.. .   .|...+|                   +|+||+++|.++
T Consensus        88 ~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G-------------------~~aey~~v~~~~  148 (360)
T PLN02586         88 FKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYG-------------------GYSDMIVVDQHF  148 (360)
T ss_pred             cCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCC-------------------ccceEEEEchHH
Confidence            999999986654 579999999999999999765320 0   1222234                   999999999999


Q ss_pred             eEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchH-HHHHHhc
Q 018022          167 VVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK-FEIGKRF  245 (362)
Q Consensus       167 ~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~-~~~~~~~  245 (362)
                      ++++|+++++++++.+.+.+.|+|+++.....+++|++|||.|+|++|++++|+|+.+|+ +|++++.++++ .+.++++
T Consensus       149 ~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~  227 (360)
T PLN02586        149 VLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRL  227 (360)
T ss_pred             eeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhC
Confidence            999999999999999999999999987666667899999999999999999999999999 77777766655 4566889


Q ss_pred             CCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcE
Q 018022          246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKI  325 (362)
Q Consensus       246 g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~  325 (362)
                      |+++++++.+   .   +.+++.++ ++|++||++|....++.++++++++ |+++.+|...  ...++++..++.+++.
T Consensus       228 Ga~~vi~~~~---~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~--~~~~~~~~~~~~~~~~  297 (360)
T PLN02586        228 GADSFLVSTD---P---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPE--KPLELPIFPLVLGRKL  297 (360)
T ss_pred             CCcEEEcCCC---H---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCC--CCCccCHHHHHhCCeE
Confidence            9999998765   2   34555544 6999999999887789999999998 9999999753  2456788888888888


Q ss_pred             EEEeeccCCCccccHHHHHHHHHcCCccccee
Q 018022          326 LMGSLFGGLKAKSDIPILLKRYMDKWSYVPFS  357 (362)
Q Consensus       326 i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~  357 (362)
                      +.|++.++   .++++++++++++|+|++.++
T Consensus       298 i~g~~~~~---~~~~~~~~~li~~g~i~~~~~  326 (360)
T PLN02586        298 VGGSDIGG---IKETQEMLDFCAKHNITADIE  326 (360)
T ss_pred             EEEcCcCC---HHHHHHHHHHHHhCCCCCcEE
Confidence            88887553   478999999999999998764

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=1.4e-45  Score=357.90  Aligned_cols=314  Identities=23%  Similarity=0.307  Sum_probs=252.6

Q ss_pred             eeEEEeccCCCceEEEEeecCCCC-------CCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPN-------SHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV   89 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~-------~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v   89 (362)
                      |||+++.++++ ++++++|.|+|+       ++||||||.++|||++|++++.|..+ ..+|.++|||++|+|+++|++|
T Consensus         3 mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~V   80 (393)
T TIGR02819         3 NRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRDV   80 (393)
T ss_pred             ceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCcc
Confidence            89999999987 999999999874       68999999999999999999987643 3569999999999999999999


Q ss_pred             CCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCC---CCCCCCCCCCccccccCCceecccccccceeeeEEeecC-
Q 018022           90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK---ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA-  165 (362)
Q Consensus        90 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~---~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~-  165 (362)
                      ++|++||||++.+...|+.|.+|+.+++++|.+....   ..+|+...|              . ..|+|+||+.+|.. 
T Consensus        81 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~--------------~-~~G~~aey~~v~~~~  145 (393)
T TIGR02819        81 EFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMG--------------G-WVGGQSEYVMVPYAD  145 (393)
T ss_pred             ccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccC--------------C-CCCceEEEEEechhh
Confidence            9999999999999999999999999999999975321   012221000              0 01499999999964 


Q ss_pred             -ceEEcCCCCCc----cchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHH
Q 018022          166 -HVVKVDPTVPP----NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE  240 (362)
Q Consensus       166 -~~~~~P~~l~~----~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~  240 (362)
                       +++++|++++.    .+++.+.+.+.++|+++ ...++++|++|||.|+|++|++++|+|+.+|++.|++++++++|++
T Consensus       146 ~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~  224 (393)
T TIGR02819       146 FNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLA  224 (393)
T ss_pred             CceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHH
Confidence             79999998753    34566677889999976 5678999999999989999999999999999966777788889999


Q ss_pred             HHHhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCH--------------HHHHHHHHHhccCCceEEEEcc
Q 018022          241 IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLA--------------SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       241 ~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~--------------~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      +++++|++.+...++   .++.+.+.+++++ ++|++||++|.+              ..++++++.++++ |+++.+|.
T Consensus       225 ~a~~~Ga~~v~~~~~---~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~  300 (393)
T TIGR02819       225 QARSFGCETVDLSKD---ATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGL  300 (393)
T ss_pred             HHHHcCCeEEecCCc---ccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeee
Confidence            999999975433333   4677788888877 899999999986              4699999999998 99999998


Q ss_pred             CCCCC-----------ccccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHHHcCCcccc
Q 018022          306 DQPGS-----------QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVP  355 (362)
Q Consensus       306 ~~~~~-----------~~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~  355 (362)
                      +....           .+++....++.+++++.|...   ...+.++++++++++|++++.
T Consensus       301 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~---~~~~~~~~~~~~~~~g~i~~~  358 (393)
T TIGR02819       301 YVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQT---PVMKYNRNLMQAILHDRVQIA  358 (393)
T ss_pred             cCCcccccccccccccccccchHHhhccCceEEeccC---ChhhhHHHHHHHHHcCCCCHH
Confidence            63211           223445556667777776421   112345789999999999864

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=8.3e-45  Score=350.58  Aligned_cols=306  Identities=22%  Similarity=0.333  Sum_probs=255.4

Q ss_pred             EEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEE
Q 018022           19 AAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVV   98 (362)
Q Consensus        19 a~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V   98 (362)
                      +++..+..+.+++.+++.|+|+++||+|||.++|||++|++.+.|......+|.++|||++|+|+++|+++++|++||||
T Consensus         9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV   88 (375)
T PLN02178          9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRV   88 (375)
T ss_pred             EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEE
Confidence            33444444458889999999999999999999999999999998865434578999999999999999999999999999


Q ss_pred             EeeCCC-CCCCCccccCCCCCCCCCCCCCCC----CCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           99 IPHFLA-DCTECVGCRSKKGNLCSAFPFKIS----PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        99 ~~~~~~-~~~~c~~c~~~~~~~c~~~~~~~~----~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      ++.+.. +|+.|.+|+.+++++|++..+...    .|...+                   |+|+||+.+|+++++++|++
T Consensus        89 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~-------------------G~~aey~~v~~~~~~~lP~~  149 (375)
T PLN02178         89 GVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQ-------------------GGYSDVIVVDHRFVLSIPDG  149 (375)
T ss_pred             EEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCC-------------------CccccEEEEchHHeEECCCC
Confidence            877765 699999999999999998653200    122223                   39999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHHHhcC-CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch-HHHHHHhcCCcEEE
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-KFEIGKRFGVTEFV  251 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~-~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~-~~~~~~~~g~~~vv  251 (362)
                      +++++++.+.+...|+|+++..... .++|++|+|.|+|++|++++|+|+.+|+ +|++++.+++ +.+.++++|+++++
T Consensus       150 ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i  228 (375)
T PLN02178        150 LPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFL  228 (375)
T ss_pred             CCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEE
Confidence            9999999999999999997644332 3689999999999999999999999999 7888887655 47888899999999


Q ss_pred             cCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022          252 NSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF  331 (362)
Q Consensus       252 ~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  331 (362)
                      ++.+   .   +.+.+.++ ++|++|||+|.+..+..++++++++ |+++.+|...  ...++++..++.+++++.|++.
T Consensus       229 ~~~~---~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~--~~~~~~~~~~~~~~~~i~g~~~  298 (375)
T PLN02178        229 VTTD---S---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPE--KPLDLPIFPLVLGRKMVGGSQI  298 (375)
T ss_pred             cCcC---H---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCC--CCCccCHHHHHhCCeEEEEeCc
Confidence            8764   2   34555554 6999999999987789999999997 9999999753  3457788888889999999876


Q ss_pred             cCCCccccHHHHHHHHHcCCccccee
Q 018022          332 GGLKAKSDIPILLKRYMDKWSYVPFS  357 (362)
Q Consensus       332 ~~~~~~~~l~~~l~~~~~g~l~~~~~  357 (362)
                      +.   .++++++++++++|+|++.++
T Consensus       299 ~~---~~~~~~~~~l~~~g~i~~~i~  321 (375)
T PLN02178        299 GG---MKETQEMLEFCAKHKIVSDIE  321 (375)
T ss_pred             cC---HHHHHHHHHHHHhCCCcccEE
Confidence            54   478999999999999998774

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-44  Score=346.19  Aligned_cols=313  Identities=22%  Similarity=0.332  Sum_probs=261.3

Q ss_pred             eeEEEeccCCCceEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~-~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G   95 (362)
                      |||+++.+++. ++++++|.|+| .++||+|||.++++|++|...+.... ...+|.++|||++|+|+++|+++++|++|
T Consensus         1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~vG   78 (347)
T PRK10309          1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEFSGYVEAVGSGVDDLHPG   78 (347)
T ss_pred             CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-CCCCCcccccceEEEEEEeCCCCCCCCCC
Confidence            79999999886 99999999998 59999999999999999987543221 12358899999999999999999999999


Q ss_pred             CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (362)
Q Consensus        96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~  175 (362)
                      |+|++.+..+|+.|..|..+.++.|.+..+   .|...+|                   +|+||+.++.+.++++|++++
T Consensus        79 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~lP~~~s  136 (347)
T PRK10309         79 DAVACVPLLPCFTCPECLRGFYSLCAKYDF---IGSRRDG-------------------GNAEYIVVKRKNLFALPTDMP  136 (347)
T ss_pred             CEEEECCCcCCCCCcchhCcCcccCCCcce---eccCCCC-------------------ccceeEEeehHHeEECcCCCC
Confidence            999999999999999999999999976543   3433444                   999999999999999999999


Q ss_pred             ccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCC
Q 018022          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN  255 (362)
Q Consensus       176 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~  255 (362)
                      +++++++. .+.++|++ .+...+++|++|||+|+|++|++++|+|+++|++.|++++++++|+++++++|+++++++++
T Consensus       137 ~~~aa~~~-~~~~~~~~-~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~  214 (347)
T PRK10309        137 IEDGAFIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE  214 (347)
T ss_pred             HHHhhhhh-HHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc
Confidence            99998875 45667876 46678899999999999999999999999999966899999999999999999999998876


Q ss_pred             CCCccHHHHHHhhcCC-Ccc-EEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCcccc-CHHHHHhcCcEEEEeecc
Q 018022          256 CGDKSVSQIIIDMTDG-GAD-YCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSL-SSFEVLHSGKILMGSLFG  332 (362)
Q Consensus       256 ~~~~~~~~~i~~~~~~-g~d-~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~-~~~~~~~~~~~i~g~~~~  332 (362)
                         .+ .+.+.+++.+ ++| ++|||+|++..+..++++++++ |+++++|.......++. ++..++.|++++.|++++
T Consensus       215 ---~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~  289 (347)
T PRK10309        215 ---MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMN  289 (347)
T ss_pred             ---cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEecc
Confidence               44 5567777766 898 9999999988799999999997 99999997543222211 234677889999998765


Q ss_pred             CCC--ccccHHHHHHHHHcCCcc--cceeccc
Q 018022          333 GLK--AKSDIPILLKRYMDKWSY--VPFSGTR  360 (362)
Q Consensus       333 ~~~--~~~~l~~~l~~~~~g~l~--~~~~~~~  360 (362)
                      ...  .+++++++++++++|+++  +.++.+|
T Consensus       290 ~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~  321 (347)
T PRK10309        290 YSSPWPGQEWETASRLLTERKLSLEPLIAHRG  321 (347)
T ss_pred             ccCCcchhHHHHHHHHHHcCCCCchhheEEEe
Confidence            322  247899999999999985  4455554

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=1.1e-44  Score=347.72  Aligned_cols=309  Identities=24%  Similarity=0.309  Sum_probs=248.1

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC---CCCCccccccceEEEEEeCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVDGVV   93 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~---~~~p~~~G~e~~G~Vv~vG~~v~~~~   93 (362)
                      |||+++..++.+++++++|.|+|+++||||||.+++||++|++.+.|.++.   ..+|.++|||++|+|+++|++ ++|+
T Consensus         1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~   79 (355)
T cd08230           1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS   79 (355)
T ss_pred             CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence            689999865544999999999999999999999999999999999887532   246899999999999999999 9999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeecCceEEcCC
Q 018022           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP  172 (362)
Q Consensus        94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~  172 (362)
                      +||||++.+..+|++|..|..+++++|++..+. ..|.. .+                   |+|+||+.+++..++++|+
T Consensus        80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~-~~g~~~~~-------------------G~~aey~~~~~~~~~~~P~  139 (355)
T cd08230          80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT-ERGIKGLH-------------------GFMREYFVDDPEYLVKVPP  139 (355)
T ss_pred             CCCEEEeccccCCCcChhhhCcCcccCCCccee-ccCcCCCC-------------------ccceeEEEeccccEEECCC
Confidence            999999999999999999999999999875431 11221 23                   3999999999999999999


Q ss_pred             CCCccchhccccchhhhHHHHH------HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcC---CchHHHHHH
Q 018022          173 TVPPNRACLLSCGVSTGVGAAW------RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV---ISEKFEIGK  243 (362)
Q Consensus       173 ~l~~~~aa~~~~~~~ta~~~l~------~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~---~~~~~~~~~  243 (362)
                      +++ ++++ +..++.+++.++.      ...++++|++|+|+|+|++|++++|+|+++|+ +|+++++   +++|+++++
T Consensus       140 ~~~-~~a~-~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~  216 (355)
T cd08230         140 SLA-DVGV-LLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVE  216 (355)
T ss_pred             CCC-ccee-ecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHH
Confidence            998 4443 3335555444332      22336789999999999999999999999999 8999987   678999999


Q ss_pred             hcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccC----HHHH
Q 018022          244 RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLS----SFEV  319 (362)
Q Consensus       244 ~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~----~~~~  319 (362)
                      ++|++. +++.+   +++.+ .. . .+++|++|||+|.+..+..+++.++++ |+++++|...+....+++    ...+
T Consensus       217 ~~Ga~~-v~~~~---~~~~~-~~-~-~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~  288 (355)
T cd08230         217 ELGATY-VNSSK---TPVAE-VK-L-VGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDL  288 (355)
T ss_pred             HcCCEE-ecCCc---cchhh-hh-h-cCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhH
Confidence            999986 56654   44433 21 1 238999999999987789999999997 999999986543345555    3567


Q ss_pred             HhcCcEEEEeeccCCCccccHHHHHHHHHcCC------cccceeccc
Q 018022          320 LHSGKILMGSLFGGLKAKSDIPILLKRYMDKW------SYVPFSGTR  360 (362)
Q Consensus       320 ~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~------l~~~~~~~~  360 (362)
                      +.|++++.|++.+.   +++++++++++.+++      +++.++.+|
T Consensus       289 ~~k~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~  332 (355)
T cd08230         289 VLGNKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGVLERLITRRV  332 (355)
T ss_pred             hhcCcEEEEecCCc---hhhHHHHHHHHHhcccccccchHHheeeee
Confidence            88999999986543   478999999999877      555566665

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=1.6e-44  Score=345.82  Aligned_cols=305  Identities=24%  Similarity=0.394  Sum_probs=263.5

Q ss_pred             EEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCC-CCCCCCccccccceEEEEEeCCCCCCCCCCCEE
Q 018022           20 AIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD-FPAVFPRILGHEAIGVVESVGENVDGVVEGDVV   98 (362)
Q Consensus        20 ~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~-~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V   98 (362)
                      +++.+++.+++++++|.|.|+++||+|||.+++||++|+..+.+.. +...+|.++|||++|+|+++|++++.+ +||+|
T Consensus         2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV   80 (349)
T TIGR03201         2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV   80 (349)
T ss_pred             ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence            4667777669999999999999999999999999999998874432 334678999999999999999999887 99999


Q ss_pred             EeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCC------
Q 018022           99 IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP------  172 (362)
Q Consensus        99 ~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~------  172 (362)
                      ++.+..+|+.|..|+.+++++|.+...   .|...+|                   +|+||+.++.+.++++|+      
T Consensus        81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~ae~~~v~~~~~~~ip~~~~~~~  138 (349)
T TIGR03201        81 IVPAVIPCGECELCKTGRGTICRAQKM---PGNDMQG-------------------GFASHIVVPAKGLCVVDEARLAAA  138 (349)
T ss_pred             EECCCCCCCCChhhhCcCcccCCCCCc---cCcCCCC-------------------cccceEEechHHeEECCccccccc
Confidence            999999999999999999999987554   3433345                   999999999999999999      


Q ss_pred             CCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022          173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN  252 (362)
Q Consensus       173 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~  252 (362)
                      ++++++++.+.+.+.++|+++ ...++++|++|+|+|+|++|++++|+|+.+|+ +|++++++++|+++++++|++++++
T Consensus       139 ~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~  216 (349)
T TIGR03201       139 GLPLEHVSVVADAVTTPYQAA-VQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLN  216 (349)
T ss_pred             CCCHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEec
Confidence            899999988888999999976 45789999999999999999999999999999 8999999999999999999999998


Q ss_pred             CCCCCCccHHHHHHhhcCC-Ccc----EEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEE
Q 018022          253 SKNCGDKSVSQIIIDMTDG-GAD----YCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM  327 (362)
Q Consensus       253 ~~~~~~~~~~~~i~~~~~~-g~d----~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~  327 (362)
                      +.+...+++.+.+++++++ ++|    ++|||+|+...++.++++++++ |+++++|....  ..++++..++.+++++.
T Consensus       217 ~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~~~  293 (349)
T TIGR03201       217 PKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMA--KTEYRLSNLMAFHARAL  293 (349)
T ss_pred             CccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCC--CcccCHHHHhhcccEEE
Confidence            7651113577788888877 886    8999999988788999999997 99999998532  34677778888889999


Q ss_pred             EeeccCCCccccHHHHHHHHHcCCcccc
Q 018022          328 GSLFGGLKAKSDIPILLKRYMDKWSYVP  355 (362)
Q Consensus       328 g~~~~~~~~~~~l~~~l~~~~~g~l~~~  355 (362)
                      |++.+.   .++++++++++++|+|++.
T Consensus       294 g~~~~~---~~~~~~~~~~i~~g~i~~~  318 (349)
T TIGR03201       294 GNWGCP---PDRYPAALDLVLDGKIQLG  318 (349)
T ss_pred             EEecCC---HHHHHHHHHHHHcCCCCcc
Confidence            987543   4789999999999999763

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=2.8e-44  Score=341.46  Aligned_cols=299  Identities=21%  Similarity=0.239  Sum_probs=256.2

Q ss_pred             EEeccCCC----ceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022           20 AIATAPGE----PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (362)
Q Consensus        20 ~~~~~~~~----~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G   95 (362)
                      +++..++.    .++++++|.|+|+++||+|||.++|||++|.+.+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   81 (329)
T TIGR02822         2 WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVG   81 (329)
T ss_pred             eeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCC
Confidence            45555552    38999999999999999999999999999999998876544558999999999999999999999999


Q ss_pred             CEEEeeCC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022           96 DVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (362)
Q Consensus        96 d~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l  174 (362)
                      |+|++.+. ..|+.|..|+.++++.|++..+   .|...+|                   +|+||+.+|.++++++|+++
T Consensus        82 d~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~lP~~~  139 (329)
T TIGR02822        82 DRVGIAWLRRTCGVCRYCRRGAENLCPASRY---TGWDTDG-------------------GYAEYTTVPAAFAYRLPTGY  139 (329)
T ss_pred             CEEEEcCccCcCCCChHHhCcCcccCCCccc---CCcccCC-------------------cceeEEEeccccEEECCCCC
Confidence            99987764 4699999999999999988665   3444445                   99999999999999999999


Q ss_pred             CccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  254 (362)
Q Consensus       175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~  254 (362)
                      ++++++.+.+.+.|||+++ ...++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|+++++++.
T Consensus       140 ~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~  217 (329)
T TIGR02822       140 DDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAY  217 (329)
T ss_pred             CHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceecccc
Confidence            9999999998999999987 56889999999999999999999999999999 899999999999999999999998754


Q ss_pred             CCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCC
Q 018022          255 NCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL  334 (362)
Q Consensus       255 ~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  334 (362)
                      +   ..         .+++|+++++.+....+..++++++++ |+++.+|...+ ...++++..++.+++++.|++... 
T Consensus       218 ~---~~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~-~~~~~~~~~~~~~~~~i~g~~~~~-  282 (329)
T TIGR02822       218 D---TP---------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLT-DTPPLNYQRHLFYERQIRSVTSNT-  282 (329)
T ss_pred             c---cC---------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCc-cCCCCCHHHHhhCCcEEEEeecCC-
Confidence            3   11         126899999998888899999999997 99999997432 223577777888899999986443 


Q ss_pred             CccccHHHHHHHHHcCCcccceeccc
Q 018022          335 KAKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       335 ~~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                        ++++.++++++++|++++ ++++|
T Consensus       283 --~~~~~~~~~l~~~g~i~~-i~~~~  305 (329)
T TIGR02822       283 --RADAREFLELAAQHGVRV-TTHTY  305 (329)
T ss_pred             --HHHHHHHHHHHHhCCCee-EEEEE
Confidence              477899999999999985 45554

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=1.5e-43  Score=339.17  Aligned_cols=310  Identities=25%  Similarity=0.399  Sum_probs=270.5

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCC-----------CCCCCccccccceEEEEEe
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-----------PAVFPRILGHEAIGVVESV   85 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~-----------~~~~p~~~G~e~~G~Vv~v   85 (362)
                      |||+++.+++. +++++++.|+|.++||+||+.++++|++|+..+.+...           ...+|.++|||++|+|+++
T Consensus         1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   79 (351)
T cd08233           1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV   79 (351)
T ss_pred             CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence            79999998876 99999999999999999999999999999887654311           0136899999999999999


Q ss_pred             CCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeec
Q 018022           86 GENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI  164 (362)
Q Consensus        86 G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~  164 (362)
                      |+++++|++||+|+..+..+|+.|.+|+.+..++|.+..+   .|.. .+                   |+|++|+.++.
T Consensus        80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------------------g~~a~~~~~~~  137 (351)
T cd08233          80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF---IGLGGGG-------------------GGFAEYVVVPA  137 (351)
T ss_pred             CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce---eccCCCC-------------------CceeeEEEech
Confidence            9999999999999999999999999999999999976543   2221 13                   39999999999


Q ss_pred             CceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh
Q 018022          165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR  244 (362)
Q Consensus       165 ~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~  244 (362)
                      +.++++|+++++++++++ ..+.+||+++ ...++++|++|+|+|+|.+|++++|+|+.+|+++|+++++++++.+++++
T Consensus       138 ~~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~  215 (351)
T cd08233         138 YHVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEE  215 (351)
T ss_pred             HHeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence            999999999999998876 4778999987 78889999999999999999999999999999789999999999999999


Q ss_pred             cCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcC
Q 018022          245 FGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSG  323 (362)
Q Consensus       245 ~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~  323 (362)
                      +|++.++++++   .++.+.+++.+++ ++|++||++|....++.++++++++ |+++.+|...  ...++++..++.++
T Consensus       216 ~ga~~~i~~~~---~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~  289 (351)
T cd08233         216 LGATIVLDPTE---VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWE--KPISFNPNDLVLKE  289 (351)
T ss_pred             hCCCEEECCCc---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCC--CCCccCHHHHHhhC
Confidence            99999999887   7788889888877 7999999999877789999999997 9999999854  34677888888999


Q ss_pred             cEEEEeeccCCCccccHHHHHHHHHcCCccc--ceeccc
Q 018022          324 KILMGSLFGGLKAKSDIPILLKRYMDKWSYV--PFSGTR  360 (362)
Q Consensus       324 ~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~--~~~~~~  360 (362)
                      +++.|++.+.   +++++++++++++|+|++  .++.+|
T Consensus       290 ~~i~g~~~~~---~~~~~~~~~~~~~g~l~~~~~i~~~~  325 (351)
T cd08233         290 KTLTGSICYT---REDFEEVIDLLASGKIDAEPLITSRI  325 (351)
T ss_pred             cEEEEEeccC---cchHHHHHHHHHcCCCChHHheEEEe
Confidence            9999986543   588999999999999964  355554

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.7e-43  Score=339.75  Aligned_cols=316  Identities=21%  Similarity=0.305  Sum_probs=263.1

Q ss_pred             ceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 018022           15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE   94 (362)
Q Consensus        15 ~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~   94 (362)
                      ..++|++++.+++.+++++++.|+|+++||+|||.+++||++|+..+.|..+...+|.++|||++|+|+++|+++++|++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~   87 (357)
T PLN02514          8 KKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTV   87 (357)
T ss_pred             ceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccC
Confidence            45999999999988999999999999999999999999999999998886644457899999999999999999999999


Q ss_pred             CCEEEeeCCC-CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           95 GDVVIPHFLA-DCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        95 Gd~V~~~~~~-~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      ||+|++.+.. .|++|..|+.++.++|++..+....+. ..|              ....|+|+||+.++.+.++++|++
T Consensus        88 Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~-~~g--------------~~~~G~~aey~~v~~~~~~~iP~~  152 (357)
T PLN02514         88 GDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVY-TDG--------------KPTQGGFASAMVVDQKFVVKIPEG  152 (357)
T ss_pred             CCEEEEcCccccCCCChhHhCCCcccCCCccccccccc-cCC--------------ccCCCccccEEEEchHHeEECCCC
Confidence            9999876544 699999999999999987643210000 001              011249999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHH-HHhcCCcEEEc
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGVTEFVN  252 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~-~~~~g~~~vv~  252 (362)
                      +++++++.+++.+.|||+++......++|++|+|+|+|++|++++|+|+.+|+ +++++++++++++. ++++|++++++
T Consensus       153 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~  231 (357)
T PLN02514        153 MAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLV  231 (357)
T ss_pred             CCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEec
Confidence            99999999999999999987665666899999999989999999999999999 78888777776655 46799998887


Q ss_pred             CCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeecc
Q 018022          253 SKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG  332 (362)
Q Consensus       253 ~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~  332 (362)
                      +.+   .   +.+.+.+. ++|++||++|....++.++++++++ |+++.+|...  ...++++..++.+++++.|++.+
T Consensus       232 ~~~---~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~~~~~i~g~~~~  301 (357)
T PLN02514        232 SSD---A---AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVIN--TPLQFVTPMLMLGRKVITGSFIG  301 (357)
T ss_pred             CCC---h---HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCC--CCCcccHHHHhhCCcEEEEEecC
Confidence            654   2   23444443 6999999999877789999999997 9999999853  23567778888899999999765


Q ss_pred             CCCccccHHHHHHHHHcCCcccceeccc
Q 018022          333 GLKAKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       333 ~~~~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      .   .++++++++++++|++++.++ +|
T Consensus       302 ~---~~~~~~~~~~~~~g~l~~~i~-~~  325 (357)
T PLN02514        302 S---MKETEEMLEFCKEKGLTSMIE-VV  325 (357)
T ss_pred             C---HHHHHHHHHHHHhCCCcCcEE-EE
Confidence            4   468999999999999987664 44

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=9e-43  Score=336.59  Aligned_cols=337  Identities=42%  Similarity=0.749  Sum_probs=272.6

Q ss_pred             CcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCC
Q 018022           13 KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGV   92 (362)
Q Consensus        13 ~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~   92 (362)
                      +-.+|||+++..++++++++++|.|+|.++||+|||.+++||++|...+.|..+ ..+|.++|||++|+|+++|++++.|
T Consensus         4 ~~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~   82 (373)
T cd08299           4 KVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTV   82 (373)
T ss_pred             ccceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccC
Confidence            445699999999887799999999999999999999999999999999988753 3568999999999999999999999


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCC
Q 018022           93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP  172 (362)
Q Consensus        93 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~  172 (362)
                      ++||+|++.+..+|++|.+|+.++.+.|++.......|...++..++. ..|...++.+..|+|+||++++.++++++|+
T Consensus        83 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~  161 (373)
T cd08299          83 KPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFT-CKGKPIHHFLGTSTFSEYTVVDEIAVAKIDA  161 (373)
T ss_pred             CCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccc-cCCcccccccCCCcccceEEecccceeeCCC
Confidence            999999999999999999999999999987543211122211111100 0111112222346999999999999999999


Q ss_pred             CCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022          173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN  252 (362)
Q Consensus       173 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~  252 (362)
                      ++++++++++.+++.+||+++....++++|++|+|+|+|++|++++++|+.+|+.+|++++++++|++.++++|++++++
T Consensus       162 ~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~  241 (373)
T cd08299         162 AAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECIN  241 (373)
T ss_pred             CCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEec
Confidence            99999999999999999998878889999999999988999999999999999878999999999999999999999998


Q ss_pred             CCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHh-ccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022          253 SKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACC-RKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF  331 (362)
Q Consensus       253 ~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l-~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  331 (362)
                      ..+ ...++.+.+.+++++++|++|||+|++..+..++..+ +++ |+++.+|.......+++++.. +.++.++.+++.
T Consensus       242 ~~~-~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~~~~~  318 (373)
T cd08299         242 PQD-YKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPML-LLTGRTWKGAVF  318 (373)
T ss_pred             ccc-cchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHH-HhcCCeEEEEEe
Confidence            764 1123667777776568999999999877678777765 566 999999975433345555543 346889999988


Q ss_pred             cCCCccccHHHHHHHHHcCCccc
Q 018022          332 GGLKAKSDIPILLKRYMDKWSYV  354 (362)
Q Consensus       332 ~~~~~~~~l~~~l~~~~~g~l~~  354 (362)
                      +.+..++++.++++.+.++.+++
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~  341 (373)
T cd08299         319 GGWKSKDSVPKLVADYMAKKFNL  341 (373)
T ss_pred             cCCccHHHHHHHHHHHHcCCCCc
Confidence            77655678888888888776543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=7e-43  Score=335.86  Aligned_cols=323  Identities=27%  Similarity=0.375  Sum_probs=270.5

Q ss_pred             eEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCC------
Q 018022           18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG------   91 (362)
Q Consensus        18 ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~------   91 (362)
                      ||+++.++++.+++++++.|.|+++||+|||.++++|++|...+.|..+...+|.++|||++|+|+++|+++++      
T Consensus         2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~   81 (361)
T cd08231           2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP   81 (361)
T ss_pred             eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence            79999999966999999999999999999999999999999998887653567899999999999999999986      


Q ss_pred             CCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCC-CCccccccCCceecccccccceeeeEEeecC-ceEE
Q 018022           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD-QTSRFKDLRGETIHHFVSVSSFSEYTVLDIA-HVVK  169 (362)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~-g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~-~~~~  169 (362)
                      |++||+|+..+..+|+.|..|+.++.+.|++....   |.... |.             .-..|+|++|+.++++ .+++
T Consensus        82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~---~~~~~~~~-------------~~~~g~~a~~~~v~~~~~~~~  145 (361)
T cd08231          82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKY---GHEASCDD-------------PHLSGGYAEHIYLPPGTAIVR  145 (361)
T ss_pred             cCCCCEEEEcccCCCCCChhHhCcCccccccchhc---cccccccC-------------CCCCcccceEEEecCCCceEE
Confidence            99999999999999999999999999999887652   22110 00             0012499999999986 7999


Q ss_pred             cCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE
Q 018022          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE  249 (362)
Q Consensus       170 ~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~  249 (362)
                      +|++++.++++++++++.|||+++.+....+++++|||+|+|.+|++++++|+.+|+++|+++++++++.++++++|+++
T Consensus       146 lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~  225 (361)
T cd08231         146 VPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADA  225 (361)
T ss_pred             CCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCe
Confidence            99999999999988899999998866666679999999999999999999999999978999999999999999999999


Q ss_pred             EEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEE
Q 018022          250 FVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMG  328 (362)
Q Consensus       250 vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g  328 (362)
                      ++++++....++.+.+.+.+++ ++|++||++|+...+..++++++++ |+++.+|........++++..++.+++++.+
T Consensus       226 vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  304 (361)
T cd08231         226 TIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIG  304 (361)
T ss_pred             EEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEE
Confidence            9987651112234577888877 9999999999877789999999997 9999999754334556777778889999999


Q ss_pred             eeccCCCccccHHHHHHHHHcC--Cc--ccceeccc
Q 018022          329 SLFGGLKAKSDIPILLKRYMDK--WS--YVPFSGTR  360 (362)
Q Consensus       329 ~~~~~~~~~~~l~~~l~~~~~g--~l--~~~~~~~~  360 (362)
                      ++.+.   +++++++++++.++  .+  .+.+.++|
T Consensus       305 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~  337 (361)
T cd08231         305 VHNYD---PSHLYRAVRFLERTQDRFPFAELVTHRY  337 (361)
T ss_pred             cccCC---chhHHHHHHHHHhccCcCCchhheeeee
Confidence            87543   47899999999887  33  33445444

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=1.1e-43  Score=338.98  Aligned_cols=296  Identities=21%  Similarity=0.229  Sum_probs=242.1

Q ss_pred             ceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC----CCCCccccccceEEEEEeCCCCC
Q 018022           15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP----AVFPRILGHEAIGVVESVGENVD   90 (362)
Q Consensus        15 ~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~----~~~p~~~G~e~~G~Vv~vG~~v~   90 (362)
                      |.-||++++++++ +++++++.|. +++||+|||.++|||++|++++.|.+..    ..+|.++|||++|+|+++|.+  
T Consensus         1 ~~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--   76 (341)
T cd08237           1 MINQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--   76 (341)
T ss_pred             CcccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--
Confidence            4568999999997 9999999995 9999999999999999999999887532    357999999999999998864  


Q ss_pred             CCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEc
Q 018022           91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV  170 (362)
Q Consensus        91 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~  170 (362)
                      +|++||||++.+..+|+ |..|  ...++|.+..+   .|...+|                   +|+||+.+|+++++++
T Consensus        77 ~~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~v  131 (341)
T cd08237          77 TYKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRF---RSSGYDG-------------------FMQDYVFLPPDRLVKL  131 (341)
T ss_pred             ccCCCCEEEECCCCCch-hccc--chhccCCCcce---eEecCCC-------------------ceEEEEEEchHHeEEC
Confidence            79999999999888877 4355  45677877654   2333345                   9999999999999999


Q ss_pred             CCCCCccchhccccchhhhHHHHHH--hcCCCCCCEEEEECCChHHHHHHHHHHH-cCCCEEEEEcCCchHHHHHHhcCC
Q 018022          171 DPTVPPNRACLLSCGVSTGVGAAWR--TANVEVGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGKRFGV  247 (362)
Q Consensus       171 P~~l~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~vlI~Gag~~G~~a~~la~~-~g~~~vi~~~~~~~~~~~~~~~g~  247 (362)
                      |+++++++|+++. +++++|+++..  .+.+++|++|||+|+|++|++++|+++. +|..+|++++++++|++++++++.
T Consensus       132 P~~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~  210 (341)
T cd08237         132 PDNVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADE  210 (341)
T ss_pred             CCCCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCc
Confidence            9999999888665 78889987643  3457899999999999999999999986 665589999999999999988766


Q ss_pred             cEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCC---HHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcC
Q 018022          248 TEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGL---ASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSG  323 (362)
Q Consensus       248 ~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~  323 (362)
                      +.+++       ++       ... ++|+|||++|+   +..+..+++.++++ |+++++|...  .+.++++..++.|+
T Consensus       211 ~~~~~-------~~-------~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~k~  273 (341)
T cd08237         211 TYLID-------DI-------PEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSE--YPVPINTRMVLEKG  273 (341)
T ss_pred             eeehh-------hh-------hhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecC--CCcccCHHHHhhCc
Confidence            54321       11       112 69999999994   56689999999998 9999999743  24577888888999


Q ss_pred             cEEEEeeccCCCccccHHHHHHHHHcC-----Ccccceeccc
Q 018022          324 KILMGSLFGGLKAKSDIPILLKRYMDK-----WSYVPFSGTR  360 (362)
Q Consensus       324 ~~i~g~~~~~~~~~~~l~~~l~~~~~g-----~l~~~~~~~~  360 (362)
                      +++.|++.+.   .+++++++++++++     ++++.++.+|
T Consensus       274 ~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~i~~~~  312 (341)
T cd08237         274 LTLVGSSRST---REDFERAVELLSRNPEVAEYLRKLVGGVF  312 (341)
T ss_pred             eEEEEecccC---HHHHHHHHHHHHhCCcccCChHHHhcccc
Confidence            9999986433   47899999999998     5666666665

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=1.6e-42  Score=333.91  Aligned_cols=332  Identities=40%  Similarity=0.743  Sum_probs=282.1

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd   96 (362)
                      +||+++.+++.++++++++.|.++++||+||+.++++|++|+..+.+... ..+|.++|||++|+|+++|++++.+++||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd   79 (365)
T cd05279           1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGD   79 (365)
T ss_pred             CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCC
Confidence            47899998887799999999999999999999999999999998887654 35678999999999999999999999999


Q ss_pred             EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 018022           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP  176 (362)
Q Consensus        97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~  176 (362)
                      +|+..+..+|++|.+|+.++.++|+........|...+|.+.++- -|-..++.++.|+|++|+.++.+.++++|+++++
T Consensus        80 ~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~  158 (365)
T cd05279          80 KVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTC-KGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPL  158 (365)
T ss_pred             EEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeec-cCCccccccccccccceEEecCCceEECCCCCCH
Confidence            999999999999999999999999887764334444444333211 0111223334569999999999999999999999


Q ss_pred             cchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCC
Q 018022          177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC  256 (362)
Q Consensus       177 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~  256 (362)
                      ++++++.+++.+||+++.+.+++++|++|||+|+|++|++++++|+.+|+..|++++++++|.+.++++|++++++.++ 
T Consensus       159 ~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~-  237 (365)
T cd05279         159 EKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRD-  237 (365)
T ss_pred             HHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeeccccc-
Confidence            9999999899999998888889999999999988999999999999999967889998999999999999999998776 


Q ss_pred             CCc--cHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhc-cCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccC
Q 018022          257 GDK--SVSQIIIDMTDGGADYCFECVGLASLVQEAYACCR-KGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG  333 (362)
Q Consensus       257 ~~~--~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~-~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  333 (362)
                        .  ++.+.+++++++++|++||++|....+..++++++ ++ |+++.+|.........++...+ .++.++.|++.+.
T Consensus       238 --~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~  313 (365)
T cd05279         238 --QDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGG  313 (365)
T ss_pred             --ccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccC
Confidence              4  67788888775599999999998777899999999 97 9999999753334567777777 6788999988777


Q ss_pred             CCccccHHHHHHHHHcCCcccc
Q 018022          334 LKAKSDIPILLKRYMDKWSYVP  355 (362)
Q Consensus       334 ~~~~~~l~~~l~~~~~g~l~~~  355 (362)
                      +...+++.+++++++++.+++.
T Consensus       314 ~~~~~~~~~~~~l~~~~~l~~~  335 (365)
T cd05279         314 WKSKDSVPKLVALYRQKKFPLD  335 (365)
T ss_pred             CchHhHHHHHHHHHHcCCcchh
Confidence            6667899999999999998863

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=8.3e-44  Score=309.34  Aligned_cols=294  Identities=23%  Similarity=0.274  Sum_probs=261.7

Q ss_pred             CCcceeeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCC
Q 018022           12 GKPIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV   89 (362)
Q Consensus        12 ~~~~~~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v   89 (362)
                      ..|+..|-+++++.|..  +++++.|.|+|+++|++||..|+|+|+-|..++.|.+.+.+.|++||-|++|+|+++|++|
T Consensus         4 ~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gv   83 (336)
T KOG1197|consen    4 ASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGV   83 (336)
T ss_pred             CCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCc
Confidence            35677899999998866  9999999999999999999999999999999999999888999999999999999999999


Q ss_pred             CCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEE
Q 018022           90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (362)
Q Consensus        90 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~  169 (362)
                      +++++||||+...                                                 ..|.|+|++.+|...+++
T Consensus        84 tdrkvGDrVayl~-------------------------------------------------~~g~yaee~~vP~~kv~~  114 (336)
T KOG1197|consen   84 TDRKVGDRVAYLN-------------------------------------------------PFGAYAEEVTVPSVKVFK  114 (336)
T ss_pred             cccccccEEEEec-------------------------------------------------cchhhheeccccceeecc
Confidence            9999999998542                                                 124999999999999999


Q ss_pred             cCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc
Q 018022          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT  248 (362)
Q Consensus       170 ~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~  248 (362)
                      +|+.+++.+||++.+...|||..+++.-++++|++|||+.| |++|+++.|++++.|. .+|++.+.++|++.+++.|++
T Consensus       115 vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~  193 (336)
T KOG1197|consen  115 VPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAE  193 (336)
T ss_pred             CCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCc
Confidence            99999999999999999999999999999999999999976 9999999999999999 999999999999999999999


Q ss_pred             EEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEE
Q 018022          249 EFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM  327 (362)
Q Consensus       249 ~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~  327 (362)
                      ++|+++.   +|+.+.+.+++++ |+|+++|.+|.+. +...+.+|++. |.++.+|+.. ...-+++...+--|.+++.
T Consensus       194 h~I~y~~---eD~v~~V~kiTngKGVd~vyDsvG~dt-~~~sl~~Lk~~-G~mVSfG~as-gl~~p~~l~~ls~k~l~lv  267 (336)
T KOG1197|consen  194 HPIDYST---EDYVDEVKKITNGKGVDAVYDSVGKDT-FAKSLAALKPM-GKMVSFGNAS-GLIDPIPLNQLSPKALQLV  267 (336)
T ss_pred             ceeeccc---hhHHHHHHhccCCCCceeeeccccchh-hHHHHHHhccC-ceEEEecccc-CCCCCeehhhcChhhhhhc
Confidence            9999998   9999999999988 9999999999877 99999999998 9999999853 3444666666666777765


Q ss_pred             EeeccCCC-cc----ccHHHHHHHHHcCCcccceecccC
Q 018022          328 GSLFGGLK-AK----SDIPILLKRYMDKWSYVPFSGTRA  361 (362)
Q Consensus       328 g~~~~~~~-~~----~~l~~~l~~~~~g~l~~~~~~~~~  361 (362)
                      -.++..+. +.    ....++++++-+|.|++.|+++|.
T Consensus       268 rpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~yp  306 (336)
T KOG1197|consen  268 RPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYP  306 (336)
T ss_pred             cHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecc
Confidence            44433332 22    345788899999999999999873

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=1.6e-42  Score=333.97  Aligned_cols=334  Identities=33%  Similarity=0.577  Sum_probs=276.4

Q ss_pred             ceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 018022           15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE   94 (362)
Q Consensus        15 ~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~   94 (362)
                      |+|||+++.++++++++++.+.|.+.++||+|||.++++|++|...+.+..+ ..+|.++|+|++|+|+++|+++.+|++
T Consensus         1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~   79 (365)
T cd08278           1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP   79 (365)
T ss_pred             CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence            5799999999877799999999999999999999999999999999888654 346889999999999999999999999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCC-ceecccccccceeeeEEeecCceEEcCCC
Q 018022           95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRG-ETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~-~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      ||+|++.+. .|+.|..|+.+..++|.+.......|...+|..-..+..| +...+.+..|+|++|+.++.++++++|++
T Consensus        80 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~  158 (365)
T cd08278          80 GDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD  158 (365)
T ss_pred             CCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence            999999775 8999999999999999865432222222222000000000 00011223469999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  253 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~  253 (362)
                      +++++++.+++++.+||.++.....++++++|+|+|+|.+|++++++|+.+|++.+++++++++|.++++++|+++++++
T Consensus       159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~  238 (365)
T cd08278         159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINP  238 (365)
T ss_pred             CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecC
Confidence            99999999999999999988888899999999999889999999999999999779999999999999999999999998


Q ss_pred             CCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccC
Q 018022          254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG  333 (362)
Q Consensus       254 ~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  333 (362)
                      ++   .++.+.+.++++.++|+++||+|....+..++++++++ |+++.+|.........+++..++.+++++.++....
T Consensus       239 ~~---~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (365)
T cd08278         239 KE---EDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGD  314 (365)
T ss_pred             CC---cCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCC
Confidence            76   67888888887339999999999877789999999997 999999975333445677777778899999887654


Q ss_pred             CCccccHHHHHHHHHcCCccc
Q 018022          334 LKAKSDIPILLKRYMDKWSYV  354 (362)
Q Consensus       334 ~~~~~~l~~~l~~~~~g~l~~  354 (362)
                      ....+.++++++++++++|++
T Consensus       315 ~~~~~~~~~~~~~l~~g~l~~  335 (365)
T cd08278         315 SVPQEFIPRLIELYRQGKFPF  335 (365)
T ss_pred             cChHHHHHHHHHHHHcCCCCh
Confidence            433567899999999999865

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=3.5e-42  Score=329.73  Aligned_cols=311  Identities=26%  Similarity=0.303  Sum_probs=265.4

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd   96 (362)
                      |||+++.+++. +++++++.|.+.++||+|||.++++|++|+..+.+.......|.++|||++|+|+++|+++++|++||
T Consensus         1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd   79 (351)
T cd08285           1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD   79 (351)
T ss_pred             CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence            79999999987 99999999999999999999999999999998887665556689999999999999999999999999


Q ss_pred             EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC--ceEEcCCCC
Q 018022           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPTV  174 (362)
Q Consensus        97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~--~~~~~P~~l  174 (362)
                      +|+..+..+|+.|..|..++++.|.+....+..+...+                   |+|++|+.++.+  .++++|+++
T Consensus        80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~-------------------g~~~~y~~v~~~~~~~~~lP~~~  140 (351)
T cd08285          80 RVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKD-------------------GVFAEYFHVNDADANLAPLPDGL  140 (351)
T ss_pred             EEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCC-------------------cceeEEEEcchhhCceEECCCCC
Confidence            99999888999999999999999986532212222223                   399999999974  899999999


Q ss_pred             CccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  254 (362)
Q Consensus       175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~  254 (362)
                      +.+++++++..+.+||++ .+..+++++++|||+|+|++|++++|+|+.+|++.+++++++++|.++++++|++++++++
T Consensus       141 ~~~~aa~~~~~~~ta~~~-~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~  219 (351)
T cd08285         141 TDEQAVMLPDMMSTGFHG-AELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYK  219 (351)
T ss_pred             CHHHhhhhccchhhHHHH-HHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCC
Confidence            999999998899999998 4778899999999998899999999999999997799999999999999999999999987


Q ss_pred             CCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCH--HHHHhcCcEEEEeec
Q 018022          255 NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS--FEVLHSGKILMGSLF  331 (362)
Q Consensus       255 ~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~--~~~~~~~~~i~g~~~  331 (362)
                      +   .++.+.+.+++.+ ++|++||++|+...+..++++++++ |+++.+|........+++.  .....+...+.+++.
T Consensus       220 ~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  295 (351)
T cd08285         220 N---GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLC  295 (351)
T ss_pred             C---CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeec
Confidence            6   6788888887766 8999999999887789999999997 9999999764333334442  222345667776543


Q ss_pred             cCCCccccHHHHHHHHHcCCccc
Q 018022          332 GGLKAKSDIPILLKRYMDKWSYV  354 (362)
Q Consensus       332 ~~~~~~~~l~~~l~~~~~g~l~~  354 (362)
                      ..  .+++++++++++++|+|++
T Consensus       296 ~~--~~~~~~~~~~~~~~g~i~~  316 (351)
T cd08285         296 PG--GRLRMERLASLIEYGRVDP  316 (351)
T ss_pred             CC--ccccHHHHHHHHHcCCCCh
Confidence            22  2578999999999999998

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=4.5e-41  Score=319.91  Aligned_cols=305  Identities=23%  Similarity=0.348  Sum_probs=267.2

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd   96 (362)
                      |||+++.+++.+++++++|.|++.++||+||+.++++|++|...+.|..+...+|.++|||++|+|+++|+++++|++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd   80 (333)
T cd08296           1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD   80 (333)
T ss_pred             CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence            79999999965699999999999999999999999999999999888664446688999999999999999999999999


Q ss_pred             EEEeeC-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022           97 VVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (362)
Q Consensus        97 ~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~  175 (362)
                      +|++.+ ...|+.|.+|..++++.|.+..+   .|...+|                   +|++|+.++...++++|++++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~---~~~~~~g-------------------~~a~~~~v~~~~~~~lp~~~~  138 (333)
T cd08296          81 RVGVGWHGGHCGTCDACRRGDFVHCENGKV---TGVTRDG-------------------GYAEYMLAPAEALARIPDDLD  138 (333)
T ss_pred             EEEeccccCCCCCChhhhCcCcccCCCCCc---cCcccCC-------------------cceeEEEEchhheEeCCCCCC
Confidence            998755 56799999999999999987664   3443344                   999999999999999999999


Q ss_pred             ccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCC
Q 018022          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN  255 (362)
Q Consensus       176 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~  255 (362)
                      +++++.+++.+.+||+++. ...+.++++|||+|+|.+|++++++|+.+|+ +++++++++++++.++++|+++++++.+
T Consensus       139 ~~~aa~l~~~~~ta~~~~~-~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~  216 (333)
T cd08296         139 AAEAAPLLCAGVTTFNALR-NSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK  216 (333)
T ss_pred             HHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC
Confidence            9999999999999999874 4589999999999999999999999999999 8999999999999999999999999876


Q ss_pred             CCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCC
Q 018022          256 CGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK  335 (362)
Q Consensus       256 ~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  335 (362)
                         .++.+.+.++  +++|++||++|....+..++++++++ |+++.+|...  ...++++..++.+++++.++..+.  
T Consensus       217 ---~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~~--  286 (333)
T cd08296         217 ---EDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAG--EPVAVSPLQLIMGRKSIHGWPSGT--  286 (333)
T ss_pred             ---ccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCC--CCCCcCHHHHhhcccEEEEeCcCC--
Confidence               5677777665  36999999998777789999999997 9999999854  346777777889999999986433  


Q ss_pred             ccccHHHHHHHHHcCCcccce
Q 018022          336 AKSDIPILLKRYMDKWSYVPF  356 (362)
Q Consensus       336 ~~~~l~~~l~~~~~g~l~~~~  356 (362)
                       .++++.++++++++++++.+
T Consensus       287 -~~~~~~~~~~~~~~~l~~~v  306 (333)
T cd08296         287 -ALDSEDTLKFSALHGVRPMV  306 (333)
T ss_pred             -HHHHHHHHHHHHhCCCCceE
Confidence             47899999999999888654

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=3.7e-41  Score=320.88  Aligned_cols=307  Identities=20%  Similarity=0.377  Sum_probs=261.5

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd   96 (362)
                      |||+++.+++. +++++++.|+|.++||+||+.+++||++|+..+.|..+..++|.++|||++|+|+++|++++.|++||
T Consensus         1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   79 (339)
T PRK10083          1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE   79 (339)
T ss_pred             CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence            78999999886 99999999999999999999999999999999888765556799999999999999999999999999


Q ss_pred             EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 018022           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP  176 (362)
Q Consensus        97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~  176 (362)
                      +|++.+..+|+.|..|..+++++|.+..+   .+...+|                   +|++|+.++..+++++|+++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~ip~~~~~  137 (339)
T PRK10083         80 RVAVDPVISCGHCYPCSIGKPNVCTSLVV---LGVHRDG-------------------GFSEYAVVPAKNAHRIPDAIAD  137 (339)
T ss_pred             EEEEccccCCCCCccccCcCcccCCCCce---EEEccCC-------------------cceeeEEechHHeEECcCCCCH
Confidence            99999999999999999999999976543   2222234                   9999999999999999999999


Q ss_pred             cchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHH-cCCCEEEEEcCCchHHHHHHhcCCcEEEcCCC
Q 018022          177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGKRFGVTEFVNSKN  255 (362)
Q Consensus       177 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~-~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~  255 (362)
                      ++++++ ..+.++|. +.+..++++|++|+|+|+|.+|++++|+|+. +|++.+++++++++|.++++++|+++++++++
T Consensus       138 ~~a~~~-~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~  215 (339)
T PRK10083        138 QYAVMV-EPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ  215 (339)
T ss_pred             HHHhhh-chHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc
Confidence            887644 57788885 5677899999999999999999999999996 69977999999999999999999999999876


Q ss_pred             CCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCC
Q 018022          256 CGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL  334 (362)
Q Consensus       256 ~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  334 (362)
                         .++.+.+..  .+ ++|++||++|.+..+..++++++++ |+++.+|....  ...++...+..+++++.++..   
T Consensus       216 ---~~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~---  284 (339)
T PRK10083        216 ---EPLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSE--PSEIVQQGITGKELSIFSSRL---  284 (339)
T ss_pred             ---ccHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CceecHHHHhhcceEEEEEec---
Confidence               566666643  23 5789999999877799999999997 99999997532  344555566678888888753   


Q ss_pred             CccccHHHHHHHHHcCCcccc--eeccc
Q 018022          335 KAKSDIPILLKRYMDKWSYVP--FSGTR  360 (362)
Q Consensus       335 ~~~~~l~~~l~~~~~g~l~~~--~~~~~  360 (362)
                       ..+++++++++++++++++.  ++.+|
T Consensus       285 -~~~~~~~~~~~~~~g~l~~~~~~~~~~  311 (339)
T PRK10083        285 -NANKFPVVIDWLSKGLIDPEKLITHTF  311 (339)
T ss_pred             -ChhhHHHHHHHHHcCCCChHHheeeee
Confidence             24789999999999999873  44443

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=5.4e-41  Score=328.07  Aligned_cols=306  Identities=19%  Similarity=0.226  Sum_probs=247.4

Q ss_pred             ceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhh-hcCCCC------CCCCccccccceEEEEEeCC
Q 018022           15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFW-KMKDFP------AVFPRILGHEAIGVVESVGE   87 (362)
Q Consensus        15 ~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~-~g~~~~------~~~p~~~G~e~~G~Vv~vG~   87 (362)
                      |+|||+++++++. ++++++|.|+|+++||+|||.++|||++|++.+ .|....      ..+|.++|||++|+|+++|+
T Consensus         1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~   79 (410)
T cd08238           1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK   79 (410)
T ss_pred             CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence            5799999999987 999999999999999999999999999999976 443211      24789999999999999999


Q ss_pred             CCC-CCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC-
Q 018022           88 NVD-GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA-  165 (362)
Q Consensus        88 ~v~-~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~-  165 (362)
                      +++ +|++||||++.+...|+.|..|..              .|...+|                   +|+||++++.+ 
T Consensus        80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~~--------------~g~~~~G-------------------~~aey~~v~~~~  126 (410)
T cd08238          80 KWQGKYKPGQRFVIQPALILPDGPSCPG--------------YSYTYPG-------------------GLATYHIIPNEV  126 (410)
T ss_pred             CccCCCCCCCEEEEcCCcCCCCCCCCCC--------------ccccCCC-------------------cceEEEEecHHh
Confidence            998 699999999999989998877621              1222344                   99999999987 


Q ss_pred             ---ceEEcCCCCCccchhcccc-ch-hhhHHHH--------HHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcC--CCEE
Q 018022          166 ---HVVKVDPTVPPNRACLLSC-GV-STGVGAA--------WRTANVEVGSTVVIFGL-GSIGLAVAEGARLCG--ATRI  229 (362)
Q Consensus       166 ---~~~~~P~~l~~~~aa~~~~-~~-~ta~~~l--------~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g--~~~v  229 (362)
                         +++++|+++++++++++.. .. .+++.++        .+..++++|++|+|+|+ |++|++++|+|+.+|  +.+|
T Consensus       127 ~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~V  206 (410)
T cd08238         127 MEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLL  206 (410)
T ss_pred             ccCCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceE
Confidence               6899999999999886531 11 1233322        24578899999999985 999999999999975  4589


Q ss_pred             EEEcCCchHHHHHHhc--------CCc-EEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCce
Q 018022          230 IGVDVISEKFEIGKRF--------GVT-EFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGK  299 (362)
Q Consensus       230 i~~~~~~~~~~~~~~~--------g~~-~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~  299 (362)
                      ++++++++|++.++++        |++ .++++++  ..++.+.+++++++ ++|++||++|.+..++.++++++++ |+
T Consensus       207 i~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~--~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~  283 (410)
T cd08238         207 VVTDVNDERLARAQRLFPPEAASRGIELLYVNPAT--IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GC  283 (410)
T ss_pred             EEEcCCHHHHHHHHHhccccccccCceEEEECCCc--cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-Ce
Confidence            9999999999999997        666 5677653  24678888888887 9999999999888899999999997 98


Q ss_pred             EEEEccCC-CCCccccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHHHcCCcccc--eeccc
Q 018022          300 TIVLGVDQ-PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVP--FSGTR  360 (362)
Q Consensus       300 iv~~G~~~-~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~--~~~~~  360 (362)
                      ++.++... .....++++..++.+++++.|++.+.   +++++++++++++|+|++.  ++.+|
T Consensus       284 ~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~~~it~~~  344 (410)
T cd08238         284 LNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN---TDDMKEAIDLMAAGKLNPARMVTHIG  344 (410)
T ss_pred             EEEEEccCCCCccccccHHHhhhcCcEEEEeCCCC---HHHHHHHHHHHHcCCCchhhcEEEEe
Confidence            88775422 22235678888899999999986543   4789999999999999983  55444

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=3.2e-40  Score=317.69  Aligned_cols=331  Identities=43%  Similarity=0.692  Sum_probs=276.6

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd   96 (362)
                      |||+++.+++.++++++++.|++.++||+||+.++++|+.|...+.|..+ ..+|.++|+|++|+|+++|++++.|++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd   79 (363)
T cd08279           1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD   79 (363)
T ss_pred             CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence            79999999987799999999999999999999999999999998888654 35678999999999999999999999999


Q ss_pred             EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 018022           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP  176 (362)
Q Consensus        97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~  176 (362)
                      +|+..+..+|+.|.+|..++.+.|+....+ .+|...++.++|. .-|....-.+..|+|++|+.++.+.++++|+++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~  157 (363)
T cd08279          80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGI-LGGQLPDGTRRFT-ADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPL  157 (363)
T ss_pred             EEEECCCCCCCCChhhcCCCcccCcccccc-cccccCCCccccc-ccCccccccccCccceeeEEeccccEEECCCCCCh
Confidence            999999999999999999999999865321 0111111111110 00111111133469999999999999999999999


Q ss_pred             cchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCC
Q 018022          177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC  256 (362)
Q Consensus       177 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~  256 (362)
                      ++++++++.+.+||.++.+..++.++++|||+|+|.+|++++++|+.+|+++|+++++++++.+.++++|++++++++. 
T Consensus       158 ~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~-  236 (363)
T cd08279         158 DRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE-  236 (363)
T ss_pred             HHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCC-
Confidence            9999999999999998888889999999999988999999999999999955999999999999999999999998876 


Q ss_pred             CCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCC
Q 018022          257 GDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK  335 (362)
Q Consensus       257 ~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  335 (362)
                        .++.+.+.+++.+ ++|++||+++....+..++++++++ |+++.+|.........++...+..++..+.++.++...
T Consensus       237 --~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (363)
T cd08279         237 --DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSAN  313 (363)
T ss_pred             --ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcC
Confidence              6788888888765 8999999999777789999999997 99999987543345567777777788888888765544


Q ss_pred             ccccHHHHHHHHHcCCccc
Q 018022          336 AKSDIPILLKRYMDKWSYV  354 (362)
Q Consensus       336 ~~~~l~~~l~~~~~g~l~~  354 (362)
                      ..+.+++++++++++++++
T Consensus       314 ~~~~~~~~~~l~~~g~l~~  332 (363)
T cd08279         314 PRRDIPRLLDLYRAGRLKL  332 (363)
T ss_pred             cHHHHHHHHHHHHcCCCCc
Confidence            5688999999999999986

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=1.5e-40  Score=316.77  Aligned_cols=307  Identities=29%  Similarity=0.442  Sum_probs=270.0

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCC---CCCCCccccccceEEEEEeCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENVDGVV   93 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~---~~~~p~~~G~e~~G~Vv~vG~~v~~~~   93 (362)
                      |||+++.++++++++.+.+.|++.++||+||+.++++|++|...+.|..+   ...+|.++|+|++|+|+++|+++.+|+
T Consensus         1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~   80 (340)
T cd05284           1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK   80 (340)
T ss_pred             CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence            78999999877799999999999999999999999999999998887654   245689999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      +||+|+..+...|+.|..|..+..++|++..+   .|+..+|                   +|++|+.++.++++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~P~~  138 (340)
T cd05284          81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARF---PGIGTDG-------------------GFAEYLLVPSRRLVKLPRG  138 (340)
T ss_pred             CCCEEEEcCCCCCCCChHHhCcCcccCCCCcc---cCccCCC-------------------cceeeEEecHHHeEECCCC
Confidence            99999999999999999999999999998887   4544455                   9999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHHHh-cCCCCCCEEEEECCChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHhcCCcEEE
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRFGVTEFV  251 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~-~~~~~g~~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~~g~~~vv  251 (362)
                      +++++++.+++.+.|||+++... ..+.++++|||+|+|.+|++++++|+.+| . +|+++++++++.+.++++|+++++
T Consensus       139 ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~  217 (340)
T cd05284         139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVL  217 (340)
T ss_pred             CCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEE
Confidence            99999999999999999987665 46889999999999779999999999999 6 899999999999999999999999


Q ss_pred             cCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEee
Q 018022          252 NSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL  330 (362)
Q Consensus       252 ~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~  330 (362)
                      ++++   . +.+.+++++++ ++|+++|++|+...++.++++++++ |+++.+|....   .+++...++.+++++.++.
T Consensus       218 ~~~~---~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~---~~~~~~~~~~~~~~~~~~~  289 (340)
T cd05284         218 NASD---D-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH---GRLPTSDLVPTEISVIGSL  289 (340)
T ss_pred             cCCc---c-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC---CccCHHHhhhcceEEEEEe
Confidence            9876   5 78888888776 8999999999877789999999997 99999997532   3455555567899999876


Q ss_pred             ccCCCccccHHHHHHHHHcCCccccee
Q 018022          331 FGGLKAKSDIPILLKRYMDKWSYVPFS  357 (362)
Q Consensus       331 ~~~~~~~~~l~~~l~~~~~g~l~~~~~  357 (362)
                      ..   ..+.+++++++++++.+++.+.
T Consensus       290 ~~---~~~~~~~~~~~l~~g~l~~~~~  313 (340)
T cd05284         290 WG---TRAELVEVVALAESGKVKVEIT  313 (340)
T ss_pred             cc---cHHHHHHHHHHHHhCCCCcceE
Confidence            43   3578999999999999987543

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=1.6e-39  Score=315.35  Aligned_cols=323  Identities=26%  Similarity=0.359  Sum_probs=266.7

Q ss_pred             eeEEEeccCCCceEEEEeecCCCC-CCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPN-SHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~-~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G   95 (362)
                      |||+++.++++ +++++++.|.|. +++|+||+.+++||++|+..+.|.++..++|.++|||++|+|+++|+++++|++|
T Consensus         1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   79 (386)
T cd08283           1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG   79 (386)
T ss_pred             CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence            79999998876 999999999984 9999999999999999999998987666678999999999999999999999999


Q ss_pred             CEEEeeCCCCCCCCccccCCCCCCCCCCCCCC-C---CCCCCCCCccccccCCceecccccccceeeeEEeecC--ceEE
Q 018022           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKI-S---PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVK  169 (362)
Q Consensus        96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~-~---~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~--~~~~  169 (362)
                      |+|++.+..+|+.|.+|+.+..++|++..... .   +|....|      ..|-........|+|++|++++.+  .+++
T Consensus        80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~  153 (386)
T cd08283          80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAG------IFGYSHLTGGYAGGQAEYVRVPFADVGPFK  153 (386)
T ss_pred             CEEEEcCcCCCCCChhhcCCCcccCCCccccccccccccccccc------ccccccccCCCCCeeEEEEEcccccCeEEE
Confidence            99999999999999999999999998754310 0   0000000      000000000123599999999987  8999


Q ss_pred             cCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE
Q 018022          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE  249 (362)
Q Consensus       170 ~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~  249 (362)
                      +|++++++++++++..+.+||+++ ....++++++|||+|+|.+|++++++|+.+|..+++++++++++.+++++++...
T Consensus       154 lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~  232 (386)
T cd08283         154 IPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAE  232 (386)
T ss_pred             CCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcE
Confidence            999999999999998999999987 7889999999999988999999999999999867999999999999999984446


Q ss_pred             EEcCCCCCCc-cHHHHHHhhcCC-CccEEEEcCCCH---------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          250 FVNSKNCGDK-SVSQIIIDMTDG-GADYCFECVGLA---------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       250 vv~~~~~~~~-~~~~~i~~~~~~-g~d~vid~~g~~---------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      ++++..   . ++.+.+.+++++ ++|++||++|+.                     ..+..++++++++ |+++.+|..
T Consensus       233 vi~~~~---~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~  308 (386)
T cd08283         233 TINFEE---VDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVY  308 (386)
T ss_pred             EEcCCc---chHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCC
Confidence            777765   4 488888888877 899999999853                     3578899999997 999999975


Q ss_pred             CCCCccccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHHHcCCcccc
Q 018022          307 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVP  355 (362)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~  355 (362)
                      ... ...+++..++.+++++.++...   ..+.+++++++++++++++.
T Consensus       309 ~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~  353 (386)
T cd08283         309 GGT-VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPS  353 (386)
T ss_pred             CCC-cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChh
Confidence            432 3456666677889999987532   35789999999999999864

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.7e-39  Score=311.08  Aligned_cols=304  Identities=25%  Similarity=0.395  Sum_probs=260.3

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC---------CCCCccccccceEEEEEeCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP---------AVFPRILGHEAIGVVESVGE   87 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~---------~~~p~~~G~e~~G~Vv~vG~   87 (362)
                      |||++++++++ +++++++.|++.+++|+||+.+++||++|...+.|....         .++|.++|||++|+|+++|+
T Consensus         1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~   79 (350)
T cd08256           1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE   79 (350)
T ss_pred             CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence            79999999987 999999999999999999999999999999988775311         24688999999999999999


Q ss_pred             CCC--CCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCC--CCCCccccccCCceecccccccceeeeEEee
Q 018022           88 NVD--GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP--RDQTSRFKDLRGETIHHFVSVSSFSEYTVLD  163 (362)
Q Consensus        88 ~v~--~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~--~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~  163 (362)
                      +++  +|++||+|+..+..+|++|..|+.++.++|.....   .|..  .+                   |+|++|+.++
T Consensus        80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~-------------------g~~~~~~~~~  137 (350)
T cd08256          80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDL---YGFQNNVN-------------------GGMAEYMRFP  137 (350)
T ss_pred             CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccc---eeeccCCC-------------------CcceeeEEcc
Confidence            998  89999999999999999999999999999975332   2321  23                   3999999999


Q ss_pred             cC-ceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH
Q 018022          164 IA-HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG  242 (362)
Q Consensus       164 ~~-~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~  242 (362)
                      ++ .++++|+++++++++++ .++.++|+++ +..+++++++|+|.|+|.+|++++++|+.+|+..++++++++++.+++
T Consensus       138 ~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~  215 (350)
T cd08256         138 KEAIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALA  215 (350)
T ss_pred             cccceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHH
Confidence            88 57899999999999988 7889999986 788999999999977899999999999999987889999999999999


Q ss_pred             HhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHH-H
Q 018022          243 KRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEV-L  320 (362)
Q Consensus       243 ~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~-~  320 (362)
                      +++|++++++++.   .++.+.+.+++++ ++|++||++|+...+..++++++++ |+++.+|....  ...++...+ .
T Consensus       216 ~~~g~~~v~~~~~---~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~  289 (350)
T cd08256         216 RKFGADVVLNPPE---VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGD--PVTVDWSIIGD  289 (350)
T ss_pred             HHcCCcEEecCCC---cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCC--CCccChhHhhc
Confidence            9999999998876   6788888888877 8999999999766688999999997 99999987543  233444433 3


Q ss_pred             hcCcEEEEeeccCCCccccHHHHHHHHHcCCcccc
Q 018022          321 HSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVP  355 (362)
Q Consensus       321 ~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~  355 (362)
                      .+++++.++....    ..++++++++++|.+++.
T Consensus       290 ~~~~~i~~~~~~~----~~~~~~~~~~~~g~l~~~  320 (350)
T cd08256         290 RKELDVLGSHLGP----YCYPIAIDLIASGRLPTD  320 (350)
T ss_pred             ccccEEEEeccCc----hhHHHHHHHHHcCCCChh
Confidence            5688888876443    568999999999999873

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.7e-39  Score=308.93  Aligned_cols=310  Identities=29%  Similarity=0.413  Sum_probs=269.7

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd   96 (362)
                      |||+++.+++.++++++.+.|.+.++||+||+.++++|++|+..+.|..+...+|.++|+|++|+|+++|++++.|++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd   80 (345)
T cd08260           1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD   80 (345)
T ss_pred             CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence            79999999887799999999999999999999999999999999988766556789999999999999999999999999


Q ss_pred             EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC--ceEEcCCCC
Q 018022           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPTV  174 (362)
Q Consensus        97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~--~~~~~P~~l  174 (362)
                      +|+..+..+|++|..|..+..++|..+.+   .+...+|                   +|++|+.++..  .++++|+++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~~iP~~~  138 (345)
T cd08260          81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQ---PGFTHPG-------------------SFAEYVAVPRADVNLVRLPDDV  138 (345)
T ss_pred             EEEECCCCCCCCCccccCcCcccCCCCcc---cccCCCC-------------------cceeEEEcccccCceEECCCCC
Confidence            99988888999999999999999998653   3333344                   99999999974  899999999


Q ss_pred             CccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  254 (362)
Q Consensus       175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~  254 (362)
                      +.++++.+.+.+.+||+++.+..++.++++|+|+|+|.+|++++++|+..|+ .|+++++++++.+.++++|++++++++
T Consensus       139 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~  217 (345)
T cd08260         139 DFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNAS  217 (345)
T ss_pred             CHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEccc
Confidence            9999999988999999988778889999999999999999999999999999 899999999999999999999999876


Q ss_pred             CCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCc-cccCHHHHHhcCcEEEEeeccC
Q 018022          255 NCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ-LSLSSFEVLHSGKILMGSLFGG  333 (362)
Q Consensus       255 ~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~-~~~~~~~~~~~~~~i~g~~~~~  333 (362)
                      +  +.++.+.+..+..+++|++||++|+...+...+++++++ |+++.+|....... ..+++..++.+++++.++... 
T Consensus       218 ~--~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  293 (345)
T cd08260         218 E--VEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM-  293 (345)
T ss_pred             c--chhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC-
Confidence            3  245677777766558999999999776688999999997 99999997533222 456666777889999997643 


Q ss_pred             CCccccHHHHHHHHHcCCcccc
Q 018022          334 LKAKSDIPILLKRYMDKWSYVP  355 (362)
Q Consensus       334 ~~~~~~l~~~l~~~~~g~l~~~  355 (362)
                        ..+.+++++++++++++.+.
T Consensus       294 --~~~~~~~~~~l~~~~~i~~~  313 (345)
T cd08260         294 --PAHRYDAMLALIASGKLDPE  313 (345)
T ss_pred             --CHHHHHHHHHHHHcCCCChh
Confidence              35789999999999998764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=1.3e-39  Score=311.71  Aligned_cols=313  Identities=26%  Similarity=0.357  Sum_probs=268.4

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCC------------CCCCCccccccceEEEEE
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF------------PAVFPRILGHEAIGVVES   84 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~------------~~~~p~~~G~e~~G~Vv~   84 (362)
                      |||+++..++.+++++++|.|++.++||+||+.++++|++|+..+.+..+            ...+|.++|+|++|+|++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~   80 (350)
T cd08240           1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA   80 (350)
T ss_pred             CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence            79999998888799999999999999999999999999999998877543            224578899999999999


Q ss_pred             eCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec
Q 018022           85 VGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI  164 (362)
Q Consensus        85 vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~  164 (362)
                      +|++++++++||+|+..+...|+.|..|.++++++|....+   .|....                   |+|++|+.++.
T Consensus        81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~  138 (350)
T cd08240          81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRA---LGIFQD-------------------GGYAEYVIVPH  138 (350)
T ss_pred             eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCc---eeeecc-------------------CcceeeEEecH
Confidence            99999999999999999999999999999999999977544   222223                   49999999999


Q ss_pred             CceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh
Q 018022          165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR  244 (362)
Q Consensus       165 ~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~  244 (362)
                      +.++++|+++++.+++.+.+.+.+||+++.....++++++|+|+|+|.+|++++|+|+.+|+++|+++++++++.+.+++
T Consensus       139 ~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~  218 (350)
T cd08240         139 SRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA  218 (350)
T ss_pred             HHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence            99999999999999999999999999988776667789999999889999999999999999889999999999999999


Q ss_pred             cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCc
Q 018022          245 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGK  324 (362)
Q Consensus       245 ~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~  324 (362)
                      +|++.+++.++   .++.+.+.+..++++|++||++|....+..++++|+++ |+++.+|......  .++...+..+++
T Consensus       219 ~g~~~~~~~~~---~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~--~~~~~~~~~~~~  292 (350)
T cd08240         219 AGADVVVNGSD---PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEA--TLPLPLLPLRAL  292 (350)
T ss_pred             hCCcEEecCCC---ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCC--cccHHHHhhcCc
Confidence            99998888776   66777777766558999999999877799999999997 9999998754322  344444566899


Q ss_pred             EEEEeeccCCCccccHHHHHHHHHcCCcccceeccc
Q 018022          325 ILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       325 ~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      ++.+++...   .+++.+++++++++.+++.+..+|
T Consensus       293 ~i~~~~~~~---~~~~~~~~~ll~~~~i~~~~~~~~  325 (350)
T cd08240         293 TIQGSYVGS---LEELRELVALAKAGKLKPIPLTER  325 (350)
T ss_pred             EEEEcccCC---HHHHHHHHHHHHcCCCccceeeEE
Confidence            999886543   378999999999999887554443

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=1.7e-39  Score=310.26  Aligned_cols=310  Identities=30%  Similarity=0.422  Sum_probs=264.9

Q ss_pred             eeEEEeccCCCceEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~-~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G   95 (362)
                      |||+++.+++. +.+.++|.|.| .++||+|||.++++|++|...+.|..+..++|.++|+|++|+|+++|+++++|++|
T Consensus         1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G   79 (347)
T cd05278           1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG   79 (347)
T ss_pred             CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence            68999999887 99999999999 89999999999999999999988877656778999999999999999999999999


Q ss_pred             CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC--ceEEcCCC
Q 018022           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT  173 (362)
Q Consensus        96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~--~~~~~P~~  173 (362)
                      |+|+..+..+|+.|.+|..+...+|++...+...+...+                   |+|++|++++.+  +++++|++
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------g~~~~~~~v~~~~~~~~~lP~~  140 (347)
T cd05278          80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRID-------------------GGQAEYVRVPYADMNLAKIPDG  140 (347)
T ss_pred             CEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCC-------------------CeeeEEEEecchhCeEEECCCC
Confidence            999999999999999999999999987664322221222                   499999999987  89999999


Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  253 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~  253 (362)
                      ++.++++.+++.+.|||+++ ...+++++++|||.|+|.+|++++|+|+.+|..+++++++++++.++++++|+++++++
T Consensus       141 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~  219 (347)
T cd05278         141 LPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINP  219 (347)
T ss_pred             CCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcC
Confidence            99999999999999999986 77889999999998889999999999999996588999888999999999999999998


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeecc
Q 018022          254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG  332 (362)
Q Consensus       254 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~  332 (362)
                      ++   .++.+.+++.+++ ++|++||++|+...+..++++++++ |+++.+|.......... ....+.+++++.++...
T Consensus       220 ~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~  294 (347)
T cd05278         220 KN---GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPL-LGEWFGKNLTFKTGLVP  294 (347)
T ss_pred             Cc---chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCc-cchhhhceeEEEeeccC
Confidence            77   6788888887776 8999999999866689999999997 99999986533221111 12334678888876533


Q ss_pred             CCCccccHHHHHHHHHcCCcccc
Q 018022          333 GLKAKSDIPILLKRYMDKWSYVP  355 (362)
Q Consensus       333 ~~~~~~~l~~~l~~~~~g~l~~~  355 (362)
                      .   .+.+++++++++++.|++.
T Consensus       295 ~---~~~~~~~~~~~~~~~l~~~  314 (347)
T cd05278         295 V---RARMPELLDLIEEGKIDPS  314 (347)
T ss_pred             c---hhHHHHHHHHHHcCCCChh
Confidence            2   5789999999999999863

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=4.2e-40  Score=310.02  Aligned_cols=278  Identities=18%  Similarity=0.242  Sum_probs=224.2

Q ss_pred             eeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecc-hhhhhhhhcCCCC---CCCCccccccceEEEEEeCCCCCC
Q 018022           16 QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLC-HSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVDG   91 (362)
Q Consensus        16 ~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~-~~d~~~~~g~~~~---~~~p~~~G~e~~G~Vv~vG~~v~~   91 (362)
                      +|||+++.+++. +++++++.|+|+++||+|||.+++|| ++|+..+.|..+.   ..+|.++|||++|+|+++|+++ +
T Consensus         1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~   78 (308)
T TIGR01202         1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G   78 (308)
T ss_pred             CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence            489999998887 99999999999999999999999996 7999988887643   3579999999999999999998 6


Q ss_pred             CCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 018022           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (362)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P  171 (362)
                      |++||||++.    |..|..|..+                 .+                   |+|+||+.+|.+.++++|
T Consensus        79 ~~vGdrV~~~----~~~c~~~~~~-----------------~~-------------------G~~aey~~v~~~~~~~ip  118 (308)
T TIGR01202        79 FRPGDRVFVP----GSNCYEDVRG-----------------LF-------------------GGASKRLVTPASRVCRLD  118 (308)
T ss_pred             CCCCCEEEEe----Cccccccccc-----------------cC-------------------CcccceEEcCHHHceeCC
Confidence            9999999873    2233322110                 12                   399999999999999999


Q ss_pred             CCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE
Q 018022          172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV  251 (362)
Q Consensus       172 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv  251 (362)
                      ++++++. +++. ...+||+++.. . ..++++++|+|+|++|++++|+|+++|++.|++++.+++|++.+..+   +++
T Consensus       119 ~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i  191 (308)
T TIGR01202       119 PALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVL  191 (308)
T ss_pred             CCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---ccc
Confidence            9998764 5555 57899998644 3 34688999999999999999999999996788888888888777654   455


Q ss_pred             cCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022          252 NSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF  331 (362)
Q Consensus       252 ~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  331 (362)
                      |+.+   .         .+.++|++|||+|+...++.+++.++++ |+++++|.+..  ..++++..++.|++++.++..
T Consensus       192 ~~~~---~---------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~i~~~~~  256 (308)
T TIGR01202       192 DPEK---D---------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTE--PVNFDFVPAFMKEARLRIAAE  256 (308)
T ss_pred             Chhh---c---------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCC--CcccccchhhhcceEEEEecc
Confidence            5432   1         1227999999999988789999999997 99999998542  356677778888999998754


Q ss_pred             cCCCccccHHHHHHHHHcCCcccc--eeccc
Q 018022          332 GGLKAKSDIPILLKRYMDKWSYVP--FSGTR  360 (362)
Q Consensus       332 ~~~~~~~~l~~~l~~~~~g~l~~~--~~~~~  360 (362)
                      +.   +++++++++++++|++++.  ++.+|
T Consensus       257 ~~---~~~~~~~~~l~~~g~i~~~~~it~~~  284 (308)
T TIGR01202       257 WQ---PGDLHAVRELIESGALSLDGLITHQR  284 (308)
T ss_pred             cc---hhHHHHHHHHHHcCCCChhhccceee
Confidence            32   4789999999999999874  55554

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=3.4e-39  Score=308.26  Aligned_cols=306  Identities=26%  Similarity=0.379  Sum_probs=266.6

Q ss_pred             eeEEEeccCCCceEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~-~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G   95 (362)
                      |||+++.+++. +++++++.|+| .++||+|||+++++|++|+..+.|..+...+|.++|||++|+|+++|++++++++|
T Consensus         1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G   79 (345)
T cd08286           1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG   79 (345)
T ss_pred             CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence            78999999887 99999999996 89999999999999999999998877655568899999999999999999999999


Q ss_pred             CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC--ceEEcCCC
Q 018022           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT  173 (362)
Q Consensus        96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~--~~~~~P~~  173 (362)
                      |+|++.+...|++|.+|..+..+.|....+  ..|...+|                   +|++|+.++.+  .++++|++
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g-------------------~~~~~~~v~~~~~~~~~lp~~  138 (345)
T cd08286          80 DRVLISCISSCGTCGYCRKGLYSHCESGGW--ILGNLIDG-------------------TQAEYVRIPHADNSLYKLPEG  138 (345)
T ss_pred             CEEEECCcCCCCCChHHHCcCcccCCCccc--ccccccCC-------------------eeeeEEEcccccCceEECCCC
Confidence            999999999999999999999999986543  12322333                   99999999987  89999999


Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  253 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~  253 (362)
                      ++..+++.+.+.+.+||+.+....++.++++|||.|+|.+|.+++|+|+.+|..++++++++++|.++++++|+++++++
T Consensus       139 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~  218 (345)
T cd08286         139 VDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNS  218 (345)
T ss_pred             CCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecc
Confidence            99999999998999999977778889999999999889999999999999994489999999999999999999999998


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeecc
Q 018022          254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG  332 (362)
Q Consensus       254 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~  332 (362)
                      ++   .++.+.+.+++.+ ++|++|||+|....++.+++.++++ |+++.+|...  ...++++..++.+++++.+....
T Consensus       219 ~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~  292 (345)
T cd08286         219 AK---GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHG--KPVDLHLEKLWIKNITITTGLVD  292 (345)
T ss_pred             cc---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccC--CCCCcCHHHHhhcCcEEEeecCc
Confidence            76   6677888887776 8999999999877789999999997 9999999743  23567777777889999876432


Q ss_pred             CCCccccHHHHHHHHHcCCccc
Q 018022          333 GLKAKSDIPILLKRYMDKWSYV  354 (362)
Q Consensus       333 ~~~~~~~l~~~l~~~~~g~l~~  354 (362)
                          .+.+++++++++++.+++
T Consensus       293 ----~~~~~~~~~~~~~~~l~~  310 (345)
T cd08286         293 ----TNTTPMLLKLVSSGKLDP  310 (345)
T ss_pred             ----hhhHHHHHHHHHcCCCCh
Confidence                256889999999999875

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=1.6e-39  Score=316.07  Aligned_cols=319  Identities=19%  Similarity=0.184  Sum_probs=265.1

Q ss_pred             CcceeeEEEecc--CC---CceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC----------CCCCcccccc
Q 018022           13 KPIQCRAAIATA--PG---EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP----------AVFPRILGHE   77 (362)
Q Consensus        13 ~~~~~ka~~~~~--~~---~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~----------~~~p~~~G~e   77 (362)
                      .|.+|||+++..  .+   +.+++++++.|.++++||+|||.+++||++|+..+.+....          ...+.++|||
T Consensus         9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e   88 (393)
T cd08246           9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD   88 (393)
T ss_pred             CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence            678899999863  22   23889999999999999999999999999999887665210          1123589999


Q ss_pred             ceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceecccccccce
Q 018022           78 AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSF  156 (362)
Q Consensus        78 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~  156 (362)
                      ++|+|+++|++++.|++||+|++.+...|+.|..|..+..++|....+   .|.. .+                   |+|
T Consensus        89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~~-------------------g~~  146 (393)
T cd08246          89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI---WGYETNY-------------------GSF  146 (393)
T ss_pred             eEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc---ccccCCC-------------------Ccc
Confidence            999999999999999999999999999999999999999999986554   2322 22                   499


Q ss_pred             eeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHh--cCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEc
Q 018022          157 SEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT--ANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD  233 (362)
Q Consensus       157 a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~  233 (362)
                      ++|++++..+++++|+++++++++.+.+.+.+||+++...  ++++++++|+|+|+ |++|++++++|+.+|+ ++++++
T Consensus       147 a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~  225 (393)
T cd08246         147 AQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVV  225 (393)
T ss_pred             eeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEe
Confidence            9999999999999999999999999999999999987654  68899999999997 9999999999999999 778888


Q ss_pred             CCchHHHHHHhcCCcEEEcCCCCC-------------------CccHHHHHHhhcCC--CccEEEEcCCCHHHHHHHHHH
Q 018022          234 VISEKFEIGKRFGVTEFVNSKNCG-------------------DKSVSQIIIDMTDG--GADYCFECVGLASLVQEAYAC  292 (362)
Q Consensus       234 ~~~~~~~~~~~~g~~~vv~~~~~~-------------------~~~~~~~i~~~~~~--g~d~vid~~g~~~~~~~~~~~  292 (362)
                      +++++++.++++|+++++++++..                   ...+.+.+.+++++  ++|++||++|+. .+..++++
T Consensus       226 ~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~-~~~~~~~~  304 (393)
T cd08246         226 SSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRA-TFPTSVFV  304 (393)
T ss_pred             CCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchH-hHHHHHHH
Confidence            899999999999999999875410                   01356777787766  799999999974 48899999


Q ss_pred             hccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHHHcCCcccceeccc
Q 018022          293 CRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       293 l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      ++++ |+++.+|.... ....++...++.++.++.|++.+.   .+++.+++++++++.|.+.+..+|
T Consensus       305 l~~~-G~~v~~g~~~~-~~~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~  367 (393)
T cd08246         305 CDRG-GMVVICAGTTG-YNHTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDPCLSKVF  367 (393)
T ss_pred             hccC-CEEEEEcccCC-CCCCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCceeeeeEEE
Confidence            9997 99999987432 234566777778899999986553   368999999999999987655544

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=8.3e-40  Score=289.22  Aligned_cols=291  Identities=22%  Similarity=0.282  Sum_probs=250.1

Q ss_pred             CCCcceeeEEEeccCCCc---eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeC
Q 018022           11 AGKPIQCRAAIATAPGEP---LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVG   86 (362)
Q Consensus        11 ~~~~~~~ka~~~~~~~~~---l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG   86 (362)
                      ..++...|++++.+.|+|   ++++++++|+....+|+||.+|+.|||+|+..++|.++- +++|.+-|+|++|+|+.+|
T Consensus        14 ~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vG   93 (354)
T KOG0025|consen   14 SQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVG   93 (354)
T ss_pred             cccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEec
Confidence            357778999999999988   889999999988888999999999999999999999987 6789999999999999999


Q ss_pred             CCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCc
Q 018022           87 ENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH  166 (362)
Q Consensus        87 ~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~  166 (362)
                      +++.+|++||+|+....                                                +.|+|++|.+.+++.
T Consensus        94 s~vkgfk~Gd~VIp~~a------------------------------------------------~lGtW~t~~v~~e~~  125 (354)
T KOG0025|consen   94 SNVKGFKPGDWVIPLSA------------------------------------------------NLGTWRTEAVFSESD  125 (354)
T ss_pred             CCcCccCCCCeEeecCC------------------------------------------------CCccceeeEeecccc
Confidence            99999999999985432                                                235999999999999


Q ss_pred             eEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHH----
Q 018022          167 VVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI----  241 (362)
Q Consensus       167 ~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~----  241 (362)
                      ++++++.+++++||.+.++-+|||..+.+-.++++||+|+-.|+ +.+|++.+|+|++.|+ +.|-+.|+....+.    
T Consensus       126 Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~Gi-ktinvVRdR~~ieel~~~  204 (354)
T KOG0025|consen  126 LIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGI-KTINVVRDRPNIEELKKQ  204 (354)
T ss_pred             eEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCc-ceEEEeecCccHHHHHHH
Confidence            99999999999999999999999999989999999999999998 9999999999999999 66677667665544    


Q ss_pred             HHhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHH
Q 018022          242 GKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVL  320 (362)
Q Consensus       242 ~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~  320 (362)
                      ++.+|+++|+...+   ..-.+..+..... .+...|+|+|+.+ ...+.+.|..+ |+++.+|+. +.++++++...++
T Consensus       205 Lk~lGA~~ViTeee---l~~~~~~k~~~~~~~prLalNcVGGks-a~~iar~L~~G-gtmvTYGGM-SkqPv~~~ts~lI  278 (354)
T KOG0025|consen  205 LKSLGATEVITEEE---LRDRKMKKFKGDNPRPRLALNCVGGKS-ATEIARYLERG-GTMVTYGGM-SKQPVTVPTSLLI  278 (354)
T ss_pred             HHHcCCceEecHHH---hcchhhhhhhccCCCceEEEeccCchh-HHHHHHHHhcC-ceEEEecCc-cCCCcccccchhe
Confidence            45689999996544   1111111121222 7999999999988 77889999998 999999984 6788999999999


Q ss_pred             hcCcEEEEeeccCCCcc--------ccHHHHHHHHHcCCcccce
Q 018022          321 HSGKILMGSLFGGLKAK--------SDIPILLKRYMDKWSYVPF  356 (362)
Q Consensus       321 ~~~~~i~g~~~~~~~~~--------~~l~~~l~~~~~g~l~~~~  356 (362)
                      +|++.+.|+|+..|...        +.+.++.++++.|+|..+-
T Consensus       279 FKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~  322 (354)
T KOG0025|consen  279 FKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPN  322 (354)
T ss_pred             eccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeecccc
Confidence            99999999999998742        4578899999999998764

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=1.4e-39  Score=302.35  Aligned_cols=254  Identities=21%  Similarity=0.336  Sum_probs=215.1

Q ss_pred             cccccceEEEEEeCCCCC------CCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCce
Q 018022           73 ILGHEAIGVVESVGENVD------GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET  146 (362)
Q Consensus        73 ~~G~e~~G~Vv~vG~~v~------~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~  146 (362)
                      ++|||++|+|+++|++|+      +|++||||++.+..+|+.|.+|+.++++.|++...   .|....+.       +  
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~~-------~--   68 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRK---YGHEALDS-------G--   68 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhh---cCcccccC-------C--
Confidence            579999999999999999      89999999999999999999999999999988654   23221000       0  


Q ss_pred             ecccccccceeeeEEeecC-ceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcC
Q 018022          147 IHHFVSVSSFSEYTVLDIA-HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG  225 (362)
Q Consensus       147 ~~~~~~~g~~a~y~~v~~~-~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g  225 (362)
                         ....|+|+||+.+|++ +++++|+++++++++.+.+.+.|+|+++ +.....++++|||+|+|++|++++|+|+++|
T Consensus        69 ---~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G  144 (280)
T TIGR03366        69 ---WPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAG  144 (280)
T ss_pred             ---ccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence               0012499999999997 7999999999999999998999999976 4556679999999999999999999999999


Q ss_pred             CCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEc
Q 018022          226 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       226 ~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      +++|++++++++|+++++++|+++++++++     ..+.+++++++ ++|++||++|.+..++.+++.++++ |+++.+|
T Consensus       145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G  218 (280)
T TIGR03366       145 AARVVAADPSPDRRELALSFGATALAEPEV-----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAG  218 (280)
T ss_pred             CCEEEEECCCHHHHHHHHHcCCcEecCchh-----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEec
Confidence            966999999999999999999999988654     34566677766 8999999999988899999999998 9999999


Q ss_pred             cCCCCCccccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHHHcCC
Q 018022          305 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKW  351 (362)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~  351 (362)
                      ...+....++++..++.|++++.|++.+.   .++++++++++++++
T Consensus       219 ~~~~~~~~~i~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~l~~~~  262 (280)
T TIGR03366       219 SVFPGGPVALDPEQVVRRWLTIRGVHNYE---PRHLDQAVRFLAANG  262 (280)
T ss_pred             cCCCCCceeeCHHHHHhCCcEEEecCCCC---HHHHHHHHHHHHhhC
Confidence            75433456788889999999999986443   478999999999854

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.4e-38  Score=299.34  Aligned_cols=301  Identities=27%  Similarity=0.445  Sum_probs=259.1

Q ss_pred             eeEEEeccCC-CceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022           17 CRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (362)
Q Consensus        17 ~ka~~~~~~~-~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G   95 (362)
                      |||+++.+.+ ..+++++++.|.+.++||+|||.++++|++|...+.+.......|.++|+|++|+|+++|++++.|++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   80 (306)
T cd08258           1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG   80 (306)
T ss_pred             CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence            5899998755 249999999999999999999999999999998888775444557899999999999999999999999


Q ss_pred             CEEEeeCC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022           96 DVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (362)
Q Consensus        96 d~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l  174 (362)
                      |+|+..+. .+|+.|.+|..+..+.|.....   +|...+|                   +|++|++++.++++++|+++
T Consensus        81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~lp~~~  138 (306)
T cd08258          81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRKG---IGTQADG-------------------GFAEYVLVPEESLHELPENL  138 (306)
T ss_pred             CEEEEccCcCCCCCCcchhCcCcccCCCCce---eeecCCC-------------------ceEEEEEcchHHeEECcCCC
Confidence            99998875 6799999999999999986432   3333334                   99999999999999999999


Q ss_pred             CccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEE--cCCchHHHHHHhcCCcEEEc
Q 018022          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV--DVISEKFEIGKRFGVTEFVN  252 (362)
Q Consensus       175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~--~~~~~~~~~~~~~g~~~vv~  252 (362)
                      ++++++ +...+.++|+++....+++++++|||.|+|.+|.+++++|+.+|+ +|+++  ++++++.++++++|++++ +
T Consensus       139 ~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~  215 (306)
T cd08258         139 SLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-N  215 (306)
T ss_pred             CHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-C
Confidence            999887 555888999998888899999999998889999999999999999 77776  345568888999999888 7


Q ss_pred             CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022          253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF  331 (362)
Q Consensus       253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  331 (362)
                      ++.   .++.+.+..++++ ++|.+||++|....+...+++++++ |+++.+|... .....+++..+++|++++.|+++
T Consensus       216 ~~~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~  290 (306)
T cd08258         216 GGE---EDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFG-PLAASIDVERIIQKELSVIGSRS  290 (306)
T ss_pred             CCc---CCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC-CCCcccCHHHHhhcCcEEEEEec
Confidence            766   7788888887766 8999999998777789999999997 9999999854 33467788888899999999987


Q ss_pred             cCCCccccHHHHHHHHHcC
Q 018022          332 GGLKAKSDIPILLKRYMDK  350 (362)
Q Consensus       332 ~~~~~~~~l~~~l~~~~~g  350 (362)
                      +.   +++++++++++++|
T Consensus       291 ~~---~~~~~~~~~~~~~~  306 (306)
T cd08258         291 ST---PASWETALRLLASG  306 (306)
T ss_pred             Cc---hHhHHHHHHHHhcC
Confidence            65   47899999999876

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.7e-38  Score=304.70  Aligned_cols=331  Identities=29%  Similarity=0.452  Sum_probs=271.8

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCC---CC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG---VV   93 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~---~~   93 (362)
                      |||+++.+++.++++++.|.|.+.++||+||+.++++|++|+..+.+..+. .+|.++|||++|+|+++|+++++   |+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~   79 (367)
T cd08263           1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS   79 (367)
T ss_pred             CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence            789999999777999999999999999999999999999999988876643 66889999999999999999988   99


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCC-CCCCCCccccccCCceecccccccceeeeEEeecCceEEcCC
Q 018022           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW-MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP  172 (362)
Q Consensus        94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g-~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~  172 (362)
                      +||+|+..+..+|++|..|.-+..++|+...++..++ ...+|-+......+..+.. ...|+|++|+.++.+.++++|+
T Consensus        80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~P~  158 (367)
T cd08263          80 VGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYM-YSMGGLAEYAVVPATALAPLPE  158 (367)
T ss_pred             CCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCcccc-ccCCcceeEEEechhhEEECCC
Confidence            9999999999999999999999999998765321111 1111111100000000000 1235999999999999999999


Q ss_pred             CCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022          173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN  252 (362)
Q Consensus       173 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~  252 (362)
                      ++++.+++.+++.+.+||+++.....+.++++|||+|+|.+|++++++|+.+|++.+++++.++++.+.++++|++.+++
T Consensus       159 ~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~  238 (367)
T cd08263         159 SLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVN  238 (367)
T ss_pred             CCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEec
Confidence            99999999999999999998877788899999999988999999999999999955999999999999999999999999


Q ss_pred             CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022          253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF  331 (362)
Q Consensus       253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  331 (362)
                      +++   .++.+.+++..++ ++|++||++++...++.++++++++ |+++.+|.........+++..++.+++++.+++.
T Consensus       239 ~~~---~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (367)
T cd08263         239 AAK---EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYG  314 (367)
T ss_pred             CCc---ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCC
Confidence            877   6788888887766 8999999999974588999999997 9999998754333445676777678999888542


Q ss_pred             cCCCccccHHHHHHHHHcCCcccc
Q 018022          332 GGLKAKSDIPILLKRYMDKWSYVP  355 (362)
Q Consensus       332 ~~~~~~~~l~~~l~~~~~g~l~~~  355 (362)
                      ..  ..+.+++++++++++++++.
T Consensus       315 ~~--~~~~~~~~~~ll~~~~l~~~  336 (367)
T cd08263         315 AR--PRQDLPELVGLAASGKLDPE  336 (367)
T ss_pred             CC--cHHHHHHHHHHHHcCCCCcc
Confidence            22  24689999999999998864

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=7.2e-39  Score=303.56  Aligned_cols=287  Identities=18%  Similarity=0.197  Sum_probs=242.3

Q ss_pred             eeEEEeccCCC-----ceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCC
Q 018022           17 CRAAIATAPGE-----PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVD   90 (362)
Q Consensus        17 ~ka~~~~~~~~-----~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~   90 (362)
                      |||+++.+++.     .++++++|.|.|+++||+||+.++++|++|+..+.|..+. ..+|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~   80 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL   80 (324)
T ss_pred             CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence            78999998874     3888899999999999999999999999999998886643 45789999999999999999998


Q ss_pred             C-CCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEE
Q 018022           91 G-VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (362)
Q Consensus        91 ~-~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~  169 (362)
                      + |++||+|+..+.                             .+                   |+|+||+.+|.+.+++
T Consensus        81 ~~~~vGd~V~~~~~-----------------------------~~-------------------g~~a~~~~v~~~~~~~  112 (324)
T cd08291          81 AQSLIGKRVAFLAG-----------------------------SY-------------------GTYAEYAVADAQQCLP  112 (324)
T ss_pred             ccCCCCCEEEecCC-----------------------------CC-------------------CcchheeeecHHHeEE
Confidence            6 999999975321                             01                   3999999999999999


Q ss_pred             cCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEE-C-CChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC
Q 018022          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF-G-LGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV  247 (362)
Q Consensus       170 ~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~-G-ag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~  247 (362)
                      +|+++++++++.+.+...|||. +...... ++++++|+ | +|++|++++|+|+.+|+ +|++++++++|+++++++|+
T Consensus       113 iP~~~~~~~aa~~~~~~~ta~~-~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~  189 (324)
T cd08291         113 LPDGVSFEQGASSFVNPLTALG-MLETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGA  189 (324)
T ss_pred             CCCCCCHHHHhhhcccHHHHHH-HHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCC
Confidence            9999999999988888899975 4455555 55566665 5 59999999999999999 89999999999999999999


Q ss_pred             cEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEE
Q 018022          248 TEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKIL  326 (362)
Q Consensus       248 ~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i  326 (362)
                      ++++++++   .++.+.+++++++ ++|++||++|+.. ....+++++++ |+++.+|.........++...++.+++++
T Consensus       190 ~~~i~~~~---~~~~~~v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  264 (324)
T cd08291         190 EYVLNSSD---PDFLEDLKELIAKLNATIFFDAVGGGL-TGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSI  264 (324)
T ss_pred             cEEEECCC---ccHHHHHHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEE
Confidence            99999887   7888999998877 9999999999876 67789999997 99999997433222236667778899999


Q ss_pred             EEeeccCCC---ccccHHHHHHHHHcCCcccceeccc
Q 018022          327 MGSLFGGLK---AKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       327 ~g~~~~~~~---~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      .+++++.+.   ..+++++++++++ +++++.++++|
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~  300 (324)
T cd08291         265 EGFWLTTWLQKLGPEVVKKLKKLVK-TELKTTFASRY  300 (324)
T ss_pred             EEEEHHHhhcccCHHHHHHHHHHHh-CccccceeeEE
Confidence            999876543   2457889999998 99999988876

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1e-38  Score=303.31  Aligned_cols=307  Identities=27%  Similarity=0.369  Sum_probs=261.1

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd   96 (362)
                      |||+++.+++++++++++|.|++.++|++||++++++|++|+..+.|..+..++|.++|+|++|+|+++|++++.+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~   80 (334)
T PRK13771          1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD   80 (334)
T ss_pred             CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence            78999999998899999999999999999999999999999998888766556788999999999999999998899999


Q ss_pred             EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 018022           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP  176 (362)
Q Consensus        97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~  176 (362)
                      +|++.+..+|+.|.+|..+..+.|....+   +|...+|                   +|++|+.++.+.++++|+++++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp~~~~~  138 (334)
T PRK13771         81 RVASLLYAPDGTCEYCRSGEEAYCKNRLG---YGEELDG-------------------FFAEYAKVKVTSLVKVPPNVSD  138 (334)
T ss_pred             EEEECCCCCCcCChhhcCCCcccCccccc---cccccCc-------------------eeeeeeecchhceEECCCCCCH
Confidence            99999889999999999999999988654   3433444                   9999999999999999999999


Q ss_pred             cchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCC
Q 018022          177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN  255 (362)
Q Consensus       177 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~  255 (362)
                      .+++.+.+.+.+||+++... .++++++|+|+|+ |.+|++++++|+.+|+ +++++++++++.+.++++ ++++++.+ 
T Consensus       139 ~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~-  214 (334)
T PRK13771        139 EGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS-  214 (334)
T ss_pred             HHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch-
Confidence            99999999999999987554 8999999999998 9999999999999999 899999999999999888 66666543 


Q ss_pred             CCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCC
Q 018022          256 CGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK  335 (362)
Q Consensus       256 ~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  335 (362)
                          ++.+.++++ + ++|++|||+|+.. +..+++.++++ |+++.+|.......++++...++.+++++.++...   
T Consensus       215 ----~~~~~v~~~-~-~~d~~ld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  283 (334)
T PRK13771        215 ----KFSEEVKKI-G-GADIVIETVGTPT-LEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISA---  283 (334)
T ss_pred             ----hHHHHHHhc-C-CCcEEEEcCChHH-HHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHHHhcccEEEEecCC---
Confidence                345556554 3 6999999999865 88999999997 99999997533222234444456678999887432   


Q ss_pred             ccccHHHHHHHHHcCCcccceeccc
Q 018022          336 AKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       336 ~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      .++++++++++++++.+++.+..+|
T Consensus       284 ~~~~~~~~~~~~~~~~l~~~~~~~~  308 (334)
T PRK13771        284 TKRDVEEALKLVAEGKIKPVIGAEV  308 (334)
T ss_pred             CHHHHHHHHHHHHcCCCcceEeeeE
Confidence            3688999999999999987655443

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.2e-38  Score=300.50  Aligned_cols=307  Identities=29%  Similarity=0.494  Sum_probs=264.9

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd   96 (362)
                      |||+++..++. +++++++.|++.++||+|||.++++|+.|...+.+..+...+|.++|+|++|+|+++|++++.|++||
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd   79 (337)
T cd08261           1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD   79 (337)
T ss_pred             CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence            78999998876 99999999999999999999999999999999888765556688999999999999999999999999


Q ss_pred             EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 018022           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP  176 (362)
Q Consensus        97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~  176 (362)
                      +|+..+..+|+.|..|..++.++|.+...   .+....|                   +|++|+.++++ ++++|+++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~v~v~~~-~~~~p~~~~~  136 (337)
T cd08261          80 RVVVDPYISCGECYACRKGRPNCCENLQV---LGVHRDG-------------------GFAEYIVVPAD-ALLVPEGLSL  136 (337)
T ss_pred             EEEECCCCCCCCChhhhCcCcccCCCCCe---eeecCCC-------------------cceeEEEechh-eEECCCCCCH
Confidence            99999999999999999999999954332   2222233                   99999999999 9999999999


Q ss_pred             cchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCC
Q 018022          177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC  256 (362)
Q Consensus       177 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~  256 (362)
                      ++++++ ..+.++++++ ...++.++++|||+|+|.+|.+++++|+.+|+ +|+++.+++++.+.++++|+++++++++ 
T Consensus       137 ~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~-  212 (337)
T cd08261         137 DQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD-  212 (337)
T ss_pred             HHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc-
Confidence            999877 4778888875 78899999999999889999999999999999 8999988999999999999999999887 


Q ss_pred             CCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCC
Q 018022          257 GDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK  335 (362)
Q Consensus       257 ~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  335 (362)
                        .++.+.+.+++++ ++|++||++|+...+..++++++++ |+++.+|...  ....++...++.+++++.++..   .
T Consensus       213 --~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~--~~~~~~~~~~~~~~~~~~~~~~---~  284 (337)
T cd08261         213 --EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSK--GPVTFPDPEFHKKELTILGSRN---A  284 (337)
T ss_pred             --cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCC--CCCccCHHHHHhCCCEEEEecc---C
Confidence              6788888888776 8999999999877789999999997 9999998753  2345566667778898887642   2


Q ss_pred             ccccHHHHHHHHHcCCccc--ceecc
Q 018022          336 AKSDIPILLKRYMDKWSYV--PFSGT  359 (362)
Q Consensus       336 ~~~~l~~~l~~~~~g~l~~--~~~~~  359 (362)
                      ..+.++++++++++|.+++  .+..+
T Consensus       285 ~~~~~~~~~~l~~~~~i~~~~~~~~~  310 (337)
T cd08261         285 TREDFPDVIDLLESGKVDPEALITHR  310 (337)
T ss_pred             ChhhHHHHHHHHHcCCCChhhheEEE
Confidence            3578999999999999987  44443

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=1.9e-38  Score=309.06  Aligned_cols=320  Identities=21%  Similarity=0.214  Sum_probs=263.8

Q ss_pred             CCcceeeEEEecc--CCC---ceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCC----------CCCCC-cccc
Q 018022           12 GKPIQCRAAIATA--PGE---PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF----------PAVFP-RILG   75 (362)
Q Consensus        12 ~~~~~~ka~~~~~--~~~---~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~----------~~~~p-~~~G   75 (362)
                      ..|.+|||+++..  +++   .+++++++.|.|+++||+||+.++++|++|.....+...          ....| .++|
T Consensus         3 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G   82 (398)
T TIGR01751         3 VVPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIG   82 (398)
T ss_pred             ccchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecc
Confidence            4567899999965  443   399999999999999999999999999999876655321          11223 3799


Q ss_pred             ccceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCC-CCCCCccccccCCceeccccccc
Q 018022           76 HEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETIHHFVSVS  154 (362)
Q Consensus        76 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~~~g  154 (362)
                      ||++|+|+++|++++.|++||+|++.+...|++|+.|+.++.++|.....   .|. +.+                   |
T Consensus        83 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~-------------------g  140 (398)
T TIGR01751        83 SDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI---WGYETNF-------------------G  140 (398)
T ss_pred             cceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc---ccccCCC-------------------c
Confidence            99999999999999999999999999999999999999999999976543   121 122                   4


Q ss_pred             ceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHH--hcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEE
Q 018022          155 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR--TANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIG  231 (362)
Q Consensus       155 ~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~  231 (362)
                      +|++|+.++.+.++++|+++++++++.+.+.+.+||+++..  ..++.++++|+|+|+ |.+|++++++|+.+|+ ++++
T Consensus       141 ~~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~  219 (398)
T TIGR01751       141 SFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVA  219 (398)
T ss_pred             cceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEE
Confidence            99999999999999999999999999999899999998654  477899999999998 9999999999999999 7788


Q ss_pred             EcCCchHHHHHHhcCCcEEEcCCCCC-------------------CccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHH
Q 018022          232 VDVISEKFEIGKRFGVTEFVNSKNCG-------------------DKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYA  291 (362)
Q Consensus       232 ~~~~~~~~~~~~~~g~~~vv~~~~~~-------------------~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~  291 (362)
                      +++++++.+.++++|++.++|++++.                   ...+.+.+.+++++ ++|++|||+|.. .+..+++
T Consensus       220 ~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~-~~~~~~~  298 (398)
T TIGR01751       220 VVSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRA-TFPTSVF  298 (398)
T ss_pred             EcCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHH-HHHHHHH
Confidence            88889999999999999999875410                   01245667777776 899999999975 4889999


Q ss_pred             HhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHHHcCCcccceeccc
Q 018022          292 CCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       292 ~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      +++++ |+++.+|... .....++...++.++.++.++.++.   .+++++++++++++++++.+..++
T Consensus       299 ~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~~~~~~~  362 (398)
T TIGR01751       299 VCRRG-GMVVICGGTT-GYNHDYDNRYLWMRQKRIQGSHFAN---LREAWEANRLVAKGRIDPTLSKVY  362 (398)
T ss_pred             hhccC-CEEEEEcccc-CCCCCcCHHHHhhcccEEEccccCc---HHHHHHHHHHHHCCCcccceeeEE
Confidence            99997 9999999853 3334666777777888898886554   366889999999999987665544

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=3.7e-38  Score=300.99  Aligned_cols=304  Identities=30%  Similarity=0.421  Sum_probs=260.2

Q ss_pred             eeEEEeccCCCceEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~-~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G   95 (362)
                      |||++++++++ +++++.|.|.| +++||+||+.++++|++|+..+.|..+. ..|.++|||++|+|+++|+++.++++|
T Consensus         1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~vG~~v~~~~~G   78 (345)
T cd08287           1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT-RAPAPIGHEFVGVVEEVGSEVTSVKPG   78 (345)
T ss_pred             CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC-CCCcccccceEEEEEEeCCCCCccCCC
Confidence            78999998887 99999999996 8999999999999999999888876542 458899999999999999999999999


Q ss_pred             CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC--ceEEcCCC
Q 018022           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT  173 (362)
Q Consensus        96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~--~~~~~P~~  173 (362)
                      |+|+.....+|++|..|..++.+.|.+..+   +|...+|                   +|++|+.++.+  .++++|++
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~~lP~~  136 (345)
T cd08287          79 DFVIAPFAISDGTCPFCRAGFTTSCVHGGF---WGAFVDG-------------------GQGEYVRVPLADGTLVKVPGS  136 (345)
T ss_pred             CEEEeccccCCCCChhhhCcCcccCCCCCc---ccCCCCC-------------------ceEEEEEcchhhCceEECCCC
Confidence            999986778899999999999999987654   4444555                   99999999975  99999999


Q ss_pred             CCccchh-----ccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc
Q 018022          174 VPPNRAC-----LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT  248 (362)
Q Consensus       174 l~~~~aa-----~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~  248 (362)
                      ++++.+.     .+...+.+||+++ ...++++|++|+|.|+|.+|++++++|+++|++.++++++++++.++++++|++
T Consensus       137 l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~  215 (345)
T cd08287         137 PSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGAT  215 (345)
T ss_pred             CChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCc
Confidence            9873222     1224678899876 578899999999998899999999999999996799999999999999999999


Q ss_pred             EEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEE
Q 018022          249 EFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM  327 (362)
Q Consensus       249 ~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~  327 (362)
                      ++++++.   .++.+.+.+++++ ++|+++|++|++..++.++++++++ |+++.+|....  ...+++...+.+++++.
T Consensus       216 ~v~~~~~---~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~  289 (345)
T cd08287         216 DIVAERG---EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHG--GVELDVRELFFRNVGLA  289 (345)
T ss_pred             eEecCCc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCC--CCccCHHHHHhcceEEE
Confidence            9999887   6788888888776 8999999999887799999999997 99999987542  34566656678899998


Q ss_pred             EeeccCCCccccHHHHHHHHHcCCccc
Q 018022          328 GSLFGGLKAKSDIPILLKRYMDKWSYV  354 (362)
Q Consensus       328 g~~~~~~~~~~~l~~~l~~~~~g~l~~  354 (362)
                      +....   ..+.+++++++++++++++
T Consensus       290 ~~~~~---~~~~~~~~~~~~~~~~l~~  313 (345)
T cd08287         290 GGPAP---VRRYLPELLDDVLAGRINP  313 (345)
T ss_pred             EecCC---cHHHHHHHHHHHHcCCCCH
Confidence            86422   2578999999999999986

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.1e-38  Score=302.07  Aligned_cols=309  Identities=21%  Similarity=0.328  Sum_probs=261.5

Q ss_pred             eEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCCE
Q 018022           18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDV   97 (362)
Q Consensus        18 ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~   97 (362)
                      |+++++.++..|++++++.|+|.++||+||++++++|++|...+.|......+|.++|||++|+|+++|+++++|++||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~   80 (337)
T cd05283           1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR   80 (337)
T ss_pred             CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence            57888988887999999999999999999999999999999999887655667999999999999999999999999999


Q ss_pred             EEe-eCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 018022           98 VIP-HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP  176 (362)
Q Consensus        98 V~~-~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~  176 (362)
                      |++ .....|+.|.+|++++.++|....+.. .|+...+              ....|+|++|+.++.+.++++|+++++
T Consensus        81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------------~~~~g~~~~~~~v~~~~~~~lp~~~~~  145 (337)
T cd05283          81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTY-NGKYPDG--------------TITQGGYADHIVVDERFVFKIPEGLDS  145 (337)
T ss_pred             EEEecCCCCCCCCccccCCchhcCcchhhcc-cccccCC--------------CcCCCcceeEEEechhheEECCCCCCH
Confidence            984 445579999999999999998766421 1211111              122359999999999999999999999


Q ss_pred             cchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCC
Q 018022          177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC  256 (362)
Q Consensus       177 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~  256 (362)
                      ++++.+.+.+.+||+++ ...++++|++++|.|+|.+|++++++|+.+|+ +++++++++++.+.++++|++.+++.+. 
T Consensus       146 ~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~-  222 (337)
T cd05283         146 AAAAPLLCAGITVYSPL-KRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD-  222 (337)
T ss_pred             HHhhhhhhHHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc-
Confidence            99999999999999976 45568999999998889999999999999999 9999999999999999999999988765 


Q ss_pred             CCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCCc
Q 018022          257 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA  336 (362)
Q Consensus       257 ~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  336 (362)
                        .++.+.    .++++|++|||+|....+..++++++++ |+++.+|....  ..++++..++.+++++.+++.+.   
T Consensus       223 --~~~~~~----~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~---  290 (337)
T cd05283         223 --PEAMKK----AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEE--PLPVPPFPLIFGRKSVAGSLIGG---  290 (337)
T ss_pred             --hhhhhh----ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCC--CCccCHHHHhcCceEEEEecccC---
Confidence              333221    2348999999999886689999999997 99999997533  23667777788999999987653   


Q ss_pred             cccHHHHHHHHHcCCcccce
Q 018022          337 KSDIPILLKRYMDKWSYVPF  356 (362)
Q Consensus       337 ~~~l~~~l~~~~~g~l~~~~  356 (362)
                      .+++++++++++++++++.+
T Consensus       291 ~~~~~~~~~~~~~~~l~~~~  310 (337)
T cd05283         291 RKETQEMLDFAAEHGIKPWV  310 (337)
T ss_pred             HHHHHHHHHHHHhCCCccce
Confidence            47899999999999998754

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=3.1e-38  Score=301.24  Aligned_cols=310  Identities=23%  Similarity=0.346  Sum_probs=257.7

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCC---CCCCCCccccccceEEEEEeCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD---FPAVFPRILGHEAIGVVESVGENVDGVV   93 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~---~~~~~p~~~G~e~~G~Vv~vG~~v~~~~   93 (362)
                      ||++++..+++.++++++|.|.|+++||+||++++++|++|..++.+..   ....+|.++|||++|+|+++|+++++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~   80 (341)
T PRK05396          1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK   80 (341)
T ss_pred             CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence            6899999888779999999999999999999999999999998776532   1234678999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      +||+|+..+..+|..|..|..+..++|+...+   .+...+|                   +|++|+.++.++++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~iP~~  138 (341)
T PRK05396         81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKG---VGVNRPG-------------------AFAEYLVIPAFNVWKIPDD  138 (341)
T ss_pred             CCCEEEECCCCCCCCChhhhCcChhhCCCcce---eeecCCC-------------------cceeeEEechHHeEECcCC
Confidence            99999999999999999999999999976542   3333344                   9999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  253 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~  253 (362)
                      +++++++.+ ..+.++++++..  ...+|++|+|.|+|.+|++++++|+++|+.+|+++++++++.++++++|+++++++
T Consensus       139 l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~  215 (341)
T PRK05396        139 IPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNV  215 (341)
T ss_pred             CCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence            999888755 366666665432  34689999999889999999999999999678888889999999999999999988


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeecc
Q 018022          254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG  332 (362)
Q Consensus       254 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~  332 (362)
                      ++   .++.+.+++++++ ++|++|||+|....++.++++++++ |+++.+|....  ..+++...++.+++++.++...
T Consensus       216 ~~---~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~l~~~~~~  289 (341)
T PRK05396        216 AK---EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPG--DMAIDWNKVIFKGLTIKGIYGR  289 (341)
T ss_pred             cc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCC--CCcccHHHHhhcceEEEEEEcc
Confidence            76   6788888888776 9999999999888799999999997 99999997543  3445567778889999887532


Q ss_pred             CCCccccHHHHHHHHHcC-Ccccceecc
Q 018022          333 GLKAKSDIPILLKRYMDK-WSYVPFSGT  359 (362)
Q Consensus       333 ~~~~~~~l~~~l~~~~~g-~l~~~~~~~  359 (362)
                      .  ..+.+..++++++++ ++.+.+..+
T Consensus       290 ~--~~~~~~~~~~~~~~~~~~~~~~~~~  315 (341)
T PRK05396        290 E--MFETWYKMSALLQSGLDLSPIITHR  315 (341)
T ss_pred             C--ccchHHHHHHHHHcCCChhHheEEE
Confidence            2  235577788999888 454444443

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5e-38  Score=304.73  Aligned_cols=311  Identities=23%  Similarity=0.359  Sum_probs=257.7

Q ss_pred             ceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCC------C-CCCCCccccccceEEEEEeCC
Q 018022           15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD------F-PAVFPRILGHEAIGVVESVGE   87 (362)
Q Consensus        15 ~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~------~-~~~~p~~~G~e~~G~Vv~vG~   87 (362)
                      ..+.+.++... . ++++++|.|+++++||+||+.++++|++|+..+.+..      + ...+|.++|||++|+|+++|+
T Consensus        27 ~~~~~~~~~~~-~-~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~  104 (384)
T cd08265          27 TNLGSKVWRYP-E-LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGK  104 (384)
T ss_pred             ccceeEEEeCC-C-EEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECC
Confidence            44666666644 3 9999999999999999999999999999998876321      1 135688999999999999999


Q ss_pred             CCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCce
Q 018022           88 NVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV  167 (362)
Q Consensus        88 ~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~  167 (362)
                      +++.|++||+|++.+..+|+.|..|+.++.++|.+...   .|...+|                   +|++|+.++.+.+
T Consensus       105 ~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~g-------------------~~~~~v~v~~~~~  162 (384)
T cd08265         105 NVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE---LGFSADG-------------------AFAEYIAVNARYA  162 (384)
T ss_pred             CCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce---eeecCCC-------------------cceeeEEechHHe
Confidence            99999999999999999999999999999999987553   4444445                   9999999999999


Q ss_pred             EEcCCCC-------CccchhccccchhhhHHHHHHh-cCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHH
Q 018022          168 VKVDPTV-------PPNRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKF  239 (362)
Q Consensus       168 ~~~P~~l-------~~~~aa~~~~~~~ta~~~l~~~-~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~  239 (362)
                      +++|+++       +.+ ++++..++++||+++... .++++|++|+|+|+|.+|++++++|+.+|+.+|++++++++|.
T Consensus       163 ~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~  241 (384)
T cd08265         163 WEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERR  241 (384)
T ss_pred             EECCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH
Confidence            9999863       445 445555889999987665 6899999999998899999999999999987899999999999


Q ss_pred             HHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCH-HHHHHHHHHhccCCceEEEEccCCCCCccccCHH
Q 018022          240 EIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF  317 (362)
Q Consensus       240 ~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~  317 (362)
                      ++++++|+++++++++....++.+.+++++++ ++|+++|++|.+ ..+..+++.++++ |+++.+|....  ..++++.
T Consensus       242 ~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~  318 (384)
T cd08265         242 NLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAAT--TVPLHLE  318 (384)
T ss_pred             HHHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCC--CCcccHH
Confidence            99999999999987741113678888888887 999999999974 4578999999997 99999996432  3456666


Q ss_pred             HHHhcCcEEEEeeccCCCccccHHHHHHHHHcCCcccc
Q 018022          318 EVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVP  355 (362)
Q Consensus       318 ~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~  355 (362)
                      .+..+..++.++....  ....+++++++++++.+++.
T Consensus       319 ~~~~~~~~l~~~~~~~--~~~~~~~~~~ll~~g~l~~~  354 (384)
T cd08265         319 VLQVRRAQIVGAQGHS--GHGIFPSVIKLMASGKIDMT  354 (384)
T ss_pred             HHhhCceEEEEeeccC--CcchHHHHHHHHHcCCCChH
Confidence            6777788888875322  24679999999999999864

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=6.2e-38  Score=298.49  Aligned_cols=307  Identities=24%  Similarity=0.374  Sum_probs=260.6

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd   96 (362)
                      |||+++.++++...++++|.|.+.++||+|||.++++|++|...+.|..+. ..|.++|||++|+|+++|++++.|++||
T Consensus         1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd   79 (338)
T PRK09422          1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGD   79 (338)
T ss_pred             CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCC
Confidence            799999998874448999999999999999999999999999988776543 3478999999999999999999999999


Q ss_pred             EEEeeC-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022           97 VVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (362)
Q Consensus        97 ~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~  175 (362)
                      +|++.+ ..+|+.|..|..+..++|.+...   .|...+|                   +|++|+.++.++++++|++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~~~  137 (338)
T PRK09422         80 RVSIAWFFEGCGHCEYCTTGRETLCRSVKN---AGYTVDG-------------------GMAEQCIVTADYAVKVPEGLD  137 (338)
T ss_pred             EEEEccCCCCCCCChhhcCCCcccCCCccc---cCccccC-------------------cceeEEEEchHHeEeCCCCCC
Confidence            999765 55799999999999999987654   4444455                   999999999999999999999


Q ss_pred             ccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHH-cCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGKRFGVTEFVNSK  254 (362)
Q Consensus       176 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~-~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~  254 (362)
                      +.+++.+++.+.|||+++ ..+++++|++|||+|+|++|++++++|+. +|+ +|+++++++++.+.++++|++.+++++
T Consensus       138 ~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~  215 (338)
T PRK09422        138 PAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSK  215 (338)
T ss_pred             HHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEeccc
Confidence            999999999999999986 77899999999999999999999999998 599 899999999999999999999998875


Q ss_pred             CCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCC
Q 018022          255 NCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL  334 (362)
Q Consensus       255 ~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  334 (362)
                      .  ..++.+.+++..+ ++|.++++.++...+..++++++++ |+++.+|...  ...+++...+..++.++.+++++. 
T Consensus       216 ~--~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~-  288 (338)
T PRK09422        216 R--VEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPP--ESMDLSIPRLVLDGIEVVGSLVGT-  288 (338)
T ss_pred             c--cccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCC--CCceecHHHHhhcCcEEEEecCCC-
Confidence            3  1456677777766 6896666666666799999999997 9999999753  234566667777889998875433 


Q ss_pred             CccccHHHHHHHHHcCCccccee
Q 018022          335 KAKSDIPILLKRYMDKWSYVPFS  357 (362)
Q Consensus       335 ~~~~~l~~~l~~~~~g~l~~~~~  357 (362)
                        +++++.+++++++|++++.+.
T Consensus       289 --~~~~~~~~~l~~~g~l~~~v~  309 (338)
T PRK09422        289 --RQDLEEAFQFGAEGKVVPKVQ  309 (338)
T ss_pred             --HHHHHHHHHHHHhCCCCccEE
Confidence              478999999999999876544

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=9.6e-38  Score=300.58  Aligned_cols=308  Identities=27%  Similarity=0.421  Sum_probs=254.2

Q ss_pred             CcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCC---CCCCCccccccceEEEEEeCCCC
Q 018022           13 KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENV   89 (362)
Q Consensus        13 ~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~---~~~~p~~~G~e~~G~Vv~vG~~v   89 (362)
                      ...+|+++++.+++. +++++++.|.|.++||+||+.++++|++|+..+.+...   ...+|.++|||++|+|+++|+++
T Consensus        14 ~~~~~~~~~~~~~~~-l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (364)
T PLN02702         14 VEEENMAAWLVGVNT-LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEV   92 (364)
T ss_pred             cccccceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCC
Confidence            445677777777766 99999999999999999999999999999998876321   12357899999999999999999


Q ss_pred             CCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeecCceE
Q 018022           90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVV  168 (362)
Q Consensus        90 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~  168 (362)
                      ++|++||+|+..+..+|+.|..|..+..+.|++..+   ++.. .+                   |+|++|+.++.+.++
T Consensus        93 ~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~---~~~~~~~-------------------g~~~~y~~v~~~~~~  150 (364)
T PLN02702         93 KHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKF---FATPPVH-------------------GSLANQVVHPADLCF  150 (364)
T ss_pred             CCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccc---cCCCCCC-------------------CcccceEEcchHHeE
Confidence            999999999999999999999999999999987443   1111 12                   499999999999999


Q ss_pred             EcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc
Q 018022          169 KVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT  248 (362)
Q Consensus       169 ~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~  248 (362)
                      ++|++++++++++.. .+.++|+++ ...++.++++|+|+|+|++|++++++|+.+|++.+++++++++|.++++++|++
T Consensus       151 ~~P~~l~~~~aa~~~-~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~  228 (364)
T PLN02702        151 KLPENVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGAD  228 (364)
T ss_pred             ECCCCCCHHHHhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCC
Confidence            999999999887632 455578765 778899999999999899999999999999997789999999999999999999


Q ss_pred             EEEcCCCCCCccHHHHHHhh---cCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcE
Q 018022          249 EFVNSKNCGDKSVSQIIIDM---TDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKI  325 (362)
Q Consensus       249 ~vv~~~~~~~~~~~~~i~~~---~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~  325 (362)
                      +++++.. ...++.+.+.++   .++++|++||++|+...+..++++++++ |+++.+|....  ...++...+..++++
T Consensus       229 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~  304 (364)
T PLN02702        229 EIVLVST-NIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHN--EMTVPLTPAAAREVD  304 (364)
T ss_pred             EEEecCc-ccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC--CCcccHHHHHhCccE
Confidence            8876532 114566666654   2338999999999877799999999997 99999997432  245566678888999


Q ss_pred             EEEeeccCCCccccHHHHHHHHHcCCcc
Q 018022          326 LMGSLFGGLKAKSDIPILLKRYMDKWSY  353 (362)
Q Consensus       326 i~g~~~~~~~~~~~l~~~l~~~~~g~l~  353 (362)
                      +.+++..    ...++++++++++++++
T Consensus       305 i~~~~~~----~~~~~~~~~~~~~~~l~  328 (364)
T PLN02702        305 VVGVFRY----RNTWPLCLEFLRSGKID  328 (364)
T ss_pred             EEEeccC----hHHHHHHHHHHHcCCCC
Confidence            9987632    36789999999999986

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=9.1e-38  Score=297.91  Aligned_cols=306  Identities=27%  Similarity=0.389  Sum_probs=265.1

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd   96 (362)
                      |||+++.+++. +.+++.+.|.+.+++|+|||.++++|+.|..++.+..+....|.++|+|++|+|+++|++++.|++||
T Consensus         1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd   79 (343)
T cd08235           1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD   79 (343)
T ss_pred             CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence            68999998886 99999999999999999999999999999998887664345578999999999999999999999999


Q ss_pred             EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCc-----eEEcC
Q 018022           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH-----VVKVD  171 (362)
Q Consensus        97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~-----~~~~P  171 (362)
                      +|+..+..+|+.|..|..+..++|....+   .|...+|                   +|++|+.++.++     ++++|
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~v~v~~~~~~~~~~~~lP  137 (343)
T cd08235          80 RVFVAPHVPCGECHYCLRGNENMCPNYKK---FGNLYDG-------------------GFAEYVRVPAWAVKRGGVLKLP  137 (343)
T ss_pred             EEEEccCCCCCCChHHHCcCcccCCCcce---eccCCCC-------------------cceeeEEecccccccccEEECC
Confidence            99999999999999999999999977654   3333334                   999999999998     99999


Q ss_pred             CCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE
Q 018022          172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV  251 (362)
Q Consensus       172 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv  251 (362)
                      +++++.+++++ +.+.+||+++. ..++++|++|+|+|+|.+|++++++|+..|++.++++++++++.+.++++|.++++
T Consensus       138 ~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~  215 (343)
T cd08235         138 DNVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTI  215 (343)
T ss_pred             CCCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEe
Confidence            99999999876 68899999874 45899999999998899999999999999994499999999999999999999999


Q ss_pred             cCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEee
Q 018022          252 NSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL  330 (362)
Q Consensus       252 ~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~  330 (362)
                      ++++   .++.+.+++++++ ++|++||++++...+...+++++++ |+++.+|.........+++..+..+++.+.++.
T Consensus       216 ~~~~---~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  291 (343)
T cd08235         216 DAAE---EDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSY  291 (343)
T ss_pred             cCCc---cCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEe
Confidence            9887   7788888888777 8999999999876689999999997 999999875443345666677788899988765


Q ss_pred             ccCCCccccHHHHHHHHHcCCccc
Q 018022          331 FGGLKAKSDIPILLKRYMDKWSYV  354 (362)
Q Consensus       331 ~~~~~~~~~l~~~l~~~~~g~l~~  354 (362)
                      ..   ..+.+++++++++++.|.+
T Consensus       292 ~~---~~~~~~~~~~l~~~~~l~~  312 (343)
T cd08235         292 AA---SPEDYKEALELIASGKIDV  312 (343)
T ss_pred             cC---ChhhHHHHHHHHHcCCCCh
Confidence            33   2478999999999999863

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=1e-37  Score=297.68  Aligned_cols=308  Identities=25%  Similarity=0.375  Sum_probs=260.2

Q ss_pred             eeEEEeccCCCceEEEEeecCCCC-CCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPN-SHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~-~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G   95 (362)
                      |||+++.+++. +++++++.|+|. ++||+||+.++++|+.|...+.|..+ ..+|.++|+|++|+|+++|++++++++|
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G   78 (344)
T cd08284           1 MKAVVFKGPGD-VRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG   78 (344)
T ss_pred             CeeEEEecCCC-ceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence            68999998865 999999999985 99999999999999999988877654 3457899999999999999999999999


Q ss_pred             CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC--ceEEcCCC
Q 018022           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT  173 (362)
Q Consensus        96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~--~~~~~P~~  173 (362)
                      |+|+..+..+|+.|.+|..+..+.|++...   .|....               ....|+|++|+.++.+  .++++|++
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---------------~~~~g~~~~~~~v~~~~~~~~~~p~~  140 (344)
T cd08284          79 DRVVSPFTIACGECFYCRRGQSGRCAKGGL---FGYAGS---------------PNLDGAQAEYVRVPFADGTLLKLPDG  140 (344)
T ss_pred             CEEEEcccCCCCCChHHhCcCcccCCCCcc---cccccc---------------CCCCCceeEEEEcccccCceEECCCC
Confidence            999999999999999999999999976533   111000               0113499999999864  99999999


Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  253 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~  253 (362)
                      +++++++.+++++.|||+++. ..++.++++|+|+|+|.+|++++++|+.+|+.+|+++++.+++.++++++|+. +++.
T Consensus       141 l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~  218 (344)
T cd08284         141 LSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINF  218 (344)
T ss_pred             CCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEec
Confidence            999999999999999999874 58899999999998899999999999999976899998889999999999975 4666


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeecc
Q 018022          254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG  332 (362)
Q Consensus       254 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~  332 (362)
                      +.   .++.+.+.+++++ ++|++||++|+...+..++++++++ |+++.+|.... .....+....+.+++++.+..  
T Consensus       219 ~~---~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~--  291 (344)
T cd08284         219 ED---AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTA-EEFPFPGLDAYNKNLTLRFGR--  291 (344)
T ss_pred             CC---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCC-CCccccHHHHhhcCcEEEEec--
Confidence            55   5678888888876 9999999999877799999999997 99999997542 334556666777899887653  


Q ss_pred             CCCccccHHHHHHHHHcCCccc
Q 018022          333 GLKAKSDIPILLKRYMDKWSYV  354 (362)
Q Consensus       333 ~~~~~~~l~~~l~~~~~g~l~~  354 (362)
                       ....+.+++++++++++++++
T Consensus       292 -~~~~~~~~~~~~~~~~~~i~~  312 (344)
T cd08284         292 -CPVRSLFPELLPLLESGRLDL  312 (344)
T ss_pred             -CCcchhHHHHHHHHHcCCCCh
Confidence             223688999999999999876

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=1.2e-37  Score=301.02  Aligned_cols=316  Identities=24%  Similarity=0.331  Sum_probs=258.8

Q ss_pred             eeEEEeccCCCceEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~-~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G   95 (362)
                      ||++++.+++. ++++++|.|++ +++||+|||++++||++|+..+.|..+ ..+|.++|||++|+|+++|++++.+++|
T Consensus         1 m~~~~~~~~~~-~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~G   78 (375)
T cd08282           1 MKAVVYGGPGN-VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVG   78 (375)
T ss_pred             CceEEEecCCc-eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCC
Confidence            68999998875 99999999996 799999999999999999999988765 3568999999999999999999999999


Q ss_pred             CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC--ceEEcCCC
Q 018022           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT  173 (362)
Q Consensus        96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~--~~~~~P~~  173 (362)
                      |+|+..+..+|+.|..|..++.++|.+....  .+....|      .++    ..-..|+|++|+.++.+  .++++|++
T Consensus        79 d~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~--~~~~~~~------~~~----~~~~~g~~a~y~~v~~~~~~~~~lP~~  146 (375)
T cd08282          79 DRVVVPFNVACGRCRNCKRGLTGVCLTVNPG--RAGGAYG------YVD----MGPYGGGQAEYLRVPYADFNLLKLPDR  146 (375)
T ss_pred             CEEEEeCCCCCCCCHHHHCcCcccCCCCCcc--ccccccc------ccc----cCCCCCeeeeEEEeecccCcEEECCCC
Confidence            9999999999999999999999999864321  0000001      000    00012499999999976  89999999


Q ss_pred             CCcc---chhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE
Q 018022          174 VPPN---RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF  250 (362)
Q Consensus       174 l~~~---~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v  250 (362)
                      ++++   +++.+...+++||+++ ..+++.+|++|+|.|+|.+|++++|+|+++|+.+|++++++++|.++++++|+ ..
T Consensus       147 ~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~-~~  224 (375)
T cd08282         147 DGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA-IP  224 (375)
T ss_pred             CChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-eE
Confidence            9998   4677777899999987 78899999999999889999999999999998678889999999999999998 45


Q ss_pred             EcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHH-----------HHHHHHHHhccCCceEEEEccCCCC----------
Q 018022          251 VNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS-----------LVQEAYACCRKGWGKTIVLGVDQPG----------  309 (362)
Q Consensus       251 v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~-----------~~~~~~~~l~~~~G~iv~~G~~~~~----------  309 (362)
                      +++++   .++.+.+.+++++++|++|||+|...           .+..++++++++ |+++.+|.....          
T Consensus       225 v~~~~---~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~  300 (375)
T cd08282         225 IDFSD---GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAAAK  300 (375)
T ss_pred             eccCc---ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCccccccccccc
Confidence            67665   67788888776667999999999763           478999999997 999988864311          


Q ss_pred             -CccccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHHHcCCcccc
Q 018022          310 -SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVP  355 (362)
Q Consensus       310 -~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~  355 (362)
                       ....+++..+..++..+.++...   .++.+++++++++++++++.
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~l~~~  344 (375)
T cd08282         301 QGELSFDFGLLWAKGLSFGTGQAP---VKKYNRQLRDLILAGRAKPS  344 (375)
T ss_pred             CccccccHHHHHhcCcEEEEecCC---chhhHHHHHHHHHcCCCChH
Confidence             12345667777788888776432   35789999999999999873

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.7e-37  Score=296.00  Aligned_cols=308  Identities=28%  Similarity=0.418  Sum_probs=267.9

Q ss_pred             eeEEEeccCC-CceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCCC
Q 018022           17 CRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVE   94 (362)
Q Consensus        17 ~ka~~~~~~~-~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~~   94 (362)
                      |||+++.+++ ..+++++++.|.|.++||+||+.++++|++|..++.+..+. ...|.++|+|++|+|+++|++++.|++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~   80 (341)
T cd08297           1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV   80 (341)
T ss_pred             CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence            7999999887 33999999999999999999999999999999988876543 345778999999999999999999999


Q ss_pred             CCEEEeeC-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           95 GDVVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        95 Gd~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      ||+|+..+ ...|+.|.+|..++.++|.+..+   .|+...|                   +|++|+.++.+.++++|++
T Consensus        81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~s~~~~~~~~~~~lp~~  138 (341)
T cd08297          81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKN---SGYTVDG-------------------TFAEYAIADARYVTPIPDG  138 (341)
T ss_pred             CCEEEEecCCCCCCCCccccCCCcccCCCccc---cccccCC-------------------cceeEEEeccccEEECCCC
Confidence            99999876 67799999999999999988765   3433344                   8999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN  252 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~  252 (362)
                      ++..+++.+++.+.|||+++.. .+++++++|||+|+ +.+|++++++|+++|+ +|+++.+++++.+.++++|++++++
T Consensus       139 ~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~  216 (341)
T cd08297         139 LSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVD  216 (341)
T ss_pred             CCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEc
Confidence            9999999988899999998654 58999999999998 6799999999999999 9999999999999999999999999


Q ss_pred             CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022          253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF  331 (362)
Q Consensus       253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  331 (362)
                      +++   .++.+.+.+.+++ ++|++||+.+....+..++++++++ |+++.+|... ....++++..++.+++++.++..
T Consensus       217 ~~~---~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~  291 (341)
T cd08297         217 FKK---SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPP-GGFIPLDPFDLVLRGITIVGSLV  291 (341)
T ss_pred             CCC---ccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCC-CCCCCCCHHHHHhcccEEEEecc
Confidence            877   6788888888766 8999999888777789999999997 9999999754 33446777777889999998654


Q ss_pred             cCCCccccHHHHHHHHHcCCcccce
Q 018022          332 GGLKAKSDIPILLKRYMDKWSYVPF  356 (362)
Q Consensus       332 ~~~~~~~~l~~~l~~~~~g~l~~~~  356 (362)
                      +.   .+++++++++++++++++.+
T Consensus       292 ~~---~~~~~~~~~~~~~~~l~~~~  313 (341)
T cd08297         292 GT---RQDLQEALEFAARGKVKPHI  313 (341)
T ss_pred             CC---HHHHHHHHHHHHcCCCccee
Confidence            32   47899999999999998754

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=1.9e-37  Score=294.49  Aligned_cols=306  Identities=30%  Similarity=0.449  Sum_probs=266.9

Q ss_pred             eeEEEeccCCCc-eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCC-CCCCCccccccceEEEEEeCCCCCCCCC
Q 018022           17 CRAAIATAPGEP-LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-PAVFPRILGHEAIGVVESVGENVDGVVE   94 (362)
Q Consensus        17 ~ka~~~~~~~~~-l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~-~~~~p~~~G~e~~G~Vv~vG~~v~~~~~   94 (362)
                      ||++++..++++ +.+.+.+.|.+.+++|+||+.++++|+.|...+.+..+ ...+|.++|+|++|+|+++|++++.|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~   80 (338)
T cd08254           1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV   80 (338)
T ss_pred             CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence            799999999987 68888889999999999999999999999999888765 2456889999999999999999999999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022           95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (362)
Q Consensus        95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l  174 (362)
                      ||+|+..|..+|+.|.+|..++.++|.....   .|...+|                   +|++|+.++.+.++++|+++
T Consensus        81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp~~~  138 (338)
T cd08254          81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGM---PGLGIDG-------------------GFAEYIVVPARALVPVPDGV  138 (338)
T ss_pred             CCEEEECCCCCCCCChhhhCcCcccCCCCCc---cccccCC-------------------cceeeEEechHHeEECCCCC
Confidence            9999999999999999999999999966543   3433344                   99999999999999999999


Q ss_pred             CccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  254 (362)
Q Consensus       175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~  254 (362)
                      +.++++.+...+.+||+++....+++++++|||.|+|.+|++++++|+.+|+ +|++++.++++.+.++++|.+++++..
T Consensus       139 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~  217 (338)
T cd08254         139 PFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSL  217 (338)
T ss_pred             CHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCC
Confidence            9999999989999999988788889999999999889999999999999999 799999999999999999999988877


Q ss_pred             CCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccC
Q 018022          255 NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG  333 (362)
Q Consensus       255 ~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  333 (362)
                      +   ..+.+.+ ....+ ++|++|||+|....++.++++++++ |+++.+|....  ...++...++.++.++.+++.. 
T Consensus       218 ~---~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~-  289 (338)
T cd08254         218 D---DSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRD--KLTVDLSDLIARELRIIGSFGG-  289 (338)
T ss_pred             C---cCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCC--CCccCHHHHhhCccEEEEeccC-
Confidence            6   5566666 44555 8999999999887789999999997 99999987432  3456667788889999987543 


Q ss_pred             CCccccHHHHHHHHHcCCcccc
Q 018022          334 LKAKSDIPILLKRYMDKWSYVP  355 (362)
Q Consensus       334 ~~~~~~l~~~l~~~~~g~l~~~  355 (362)
                        ..+.++.++++++++.|++.
T Consensus       290 --~~~~~~~~~~ll~~~~l~~~  309 (338)
T cd08254         290 --TPEDLPEVLDLIAKGKLDPQ  309 (338)
T ss_pred             --CHHHHHHHHHHHHcCCCccc
Confidence              35789999999999999875

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.3e-37  Score=292.93  Aligned_cols=301  Identities=26%  Similarity=0.339  Sum_probs=251.2

Q ss_pred             eeEEEeccCC-CceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022           17 CRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (362)
Q Consensus        17 ~ka~~~~~~~-~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G   95 (362)
                      ||++++..++ +.+++++.+.|+++++||+||+.++++|++|+..+.+. ....+|.++|||++|+|+++|++++.|++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~~~~~~~g~e~~G~v~~vG~~v~~~~~G   79 (325)
T cd08264           1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVKPMPHIPGAEFAGVVEEVGDHVKGVKKG   79 (325)
T ss_pred             CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCCCCCeecccceeEEEEEECCCCCCCCCC
Confidence            6899998766 34888898888899999999999999999999887642 222457889999999999999999999999


Q ss_pred             CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (362)
Q Consensus        96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~  175 (362)
                      |+|+..+...|+.|..|..++.++|++..+   .|....|                   +|++|+.++.+.++++|++++
T Consensus        80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~~~  137 (325)
T cd08264          80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGI---IGVVSNG-------------------GYAEYIVVPEKNLFKIPDSIS  137 (325)
T ss_pred             CEEEECCCcCCCCChhhcCCCccccCccce---eeccCCC-------------------ceeeEEEcCHHHceeCCCCCC
Confidence            999999999999999999999999987654   3333334                   999999999999999999999


Q ss_pred             ccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  254 (362)
Q Consensus       176 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~  254 (362)
                      +++++.+++.+.+||+++. ..+++++++|+|+|+ |++|++++++|+.+|+ +++++++    .+.++++|++++++++
T Consensus       138 ~~~~~~~~~~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~~----~~~~~~~g~~~~~~~~  211 (325)
T cd08264         138 DELAASLPVAALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSR----KDWLKEFGADEVVDYD  211 (325)
T ss_pred             HHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeH----HHHHHHhCCCeeecch
Confidence            9999999999999999864 489999999999998 9999999999999999 7888762    3677889998888765


Q ss_pred             CCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCC
Q 018022          255 NCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL  334 (362)
Q Consensus       255 ~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  334 (362)
                      +     ..+.+++++ +++|+++|++|.. .+..++++++++ |+++.+|.. ......+++..++.++.++.++..+. 
T Consensus       212 ~-----~~~~l~~~~-~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-  281 (325)
T cd08264         212 E-----VEEKVKEIT-KMADVVINSLGSS-FWDLSLSVLGRG-GRLVTFGTL-TGGEVKLDLSDLYSKQISIIGSTGGT-  281 (325)
T ss_pred             H-----HHHHHHHHh-CCCCEEEECCCHH-HHHHHHHhhccC-CEEEEEecC-CCCCCccCHHHHhhcCcEEEEccCCC-
Confidence            4     355566666 6899999999975 589999999997 999999974 23346777788888899999876543 


Q ss_pred             CccccHHHHHHHHHcCCcccceeccc
Q 018022          335 KAKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       335 ~~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                        +++++++++++...+  +.+..+|
T Consensus       282 --~~~~~~~~~l~~~~~--~~~~~~~  303 (325)
T cd08264         282 --RKELLELVKIAKDLK--VKVWKTF  303 (325)
T ss_pred             --HHHHHHHHHHHHcCC--ceeEEEE
Confidence              578999999996444  4444443

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=2.4e-37  Score=292.32  Aligned_cols=287  Identities=23%  Similarity=0.253  Sum_probs=246.6

Q ss_pred             eeEEEeccCCCc---eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCC
Q 018022           17 CRAAIATAPGEP---LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGV   92 (362)
Q Consensus        17 ~ka~~~~~~~~~---l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~   92 (362)
                      |||+++.+++.+   ++++++|.|.+.++||+|||.++++|++|+..+.|..+. ..+|.++|||++|+|+++|+++++|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~   80 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL   80 (324)
T ss_pred             CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence            789999888753   788999999999999999999999999999998887652 4568899999999999999999999


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCC
Q 018022           93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP  172 (362)
Q Consensus        93 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~  172 (362)
                      ++||+|+..+.                                                 .|+|++|+.++...++++|+
T Consensus        81 ~~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~ip~  111 (324)
T cd08292          81 QVGQRVAVAPV-------------------------------------------------HGTWAEYFVAPADGLVPLPD  111 (324)
T ss_pred             CCCCEEEeccC-------------------------------------------------CCcceeEEEEchHHeEECCC
Confidence            99999975421                                                 13899999999999999999


Q ss_pred             CCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE
Q 018022          173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV  251 (362)
Q Consensus       173 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv  251 (362)
                      ++++++++.+++.+.++|+++ ...++++|++|||+|+ |.+|++++++|+.+|+ .++++..++++.+.++++|+++++
T Consensus       112 ~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~  189 (324)
T cd08292         112 GISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVV  189 (324)
T ss_pred             CCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEE
Confidence            999999999888889999975 5688999999999987 9999999999999999 888888888888888889999999


Q ss_pred             cCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEee
Q 018022          252 NSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL  330 (362)
Q Consensus       252 ~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~  330 (362)
                      ++++   .++.+.+.+++++ ++|++||++|+.. ...++++++++ |+++.+|... ....++++..++.+++++.++.
T Consensus       190 ~~~~---~~~~~~i~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~  263 (324)
T cd08292         190 STEQ---PGWQDKVREAAGGAPISVALDSVGGKL-AGELLSLLGEG-GTLVSFGSMS-GEPMQISSGDLIFKQATVRGFW  263 (324)
T ss_pred             cCCC---chHHHHHHHHhCCCCCcEEEECCCChh-HHHHHHhhcCC-cEEEEEecCC-CCCCcCCHHHHhhCCCEEEEEE
Confidence            8876   7788889998887 9999999999865 78999999997 9999999742 3345667766778899999987


Q ss_pred             ccCCC-------ccccHHHHHHHHHcCCcccceeccc
Q 018022          331 FGGLK-------AKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       331 ~~~~~-------~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      ...+.       ..+.++++++++++|++++.+..+|
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~  300 (324)
T cd08292         264 GGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVF  300 (324)
T ss_pred             cHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEe
Confidence            65432       1356899999999999987665544

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=4.6e-37  Score=293.44  Aligned_cols=301  Identities=30%  Similarity=0.465  Sum_probs=254.0

Q ss_pred             EEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCC-CC--CCCCccccccceEEEEEeCCCCCCCCCC
Q 018022           19 AAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD-FP--AVFPRILGHEAIGVVESVGENVDGVVEG   95 (362)
Q Consensus        19 a~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~-~~--~~~p~~~G~e~~G~Vv~vG~~v~~~~~G   95 (362)
                      |+++++++. +++++.+.|.+.++||+|||.++++|+.|...+.+.. ..  ..+|.++|+|++|+|+++|+++++|++|
T Consensus         1 ~~~~~~~~~-~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G   79 (343)
T cd05285           1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG   79 (343)
T ss_pred             CceEecCCc-eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence            467888865 9999999999999999999999999999988764321 11  2457789999999999999999999999


Q ss_pred             CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (362)
Q Consensus        96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~  175 (362)
                      |+|+..+..+|+.|..|+.+.+++|++..+.  .....+|                   +|++|++++.+.++++|++++
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g-------------------~~~~~~~v~~~~~~~lP~~~~  138 (343)
T cd05285          80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA--ATPPVDG-------------------TLCRYVNHPADFCHKLPDNVS  138 (343)
T ss_pred             CEEEEccccCCCCChhHhCcCcccCcCcccc--ccccCCC-------------------ceeeeEEecHHHcEECcCCCC
Confidence            9999999999999999999999999865431  0111233                   999999999999999999999


Q ss_pred             ccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCC
Q 018022          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN  255 (362)
Q Consensus       176 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~  255 (362)
                      +++++++ ..+.+||+++ ...+++++++|+|+|+|.+|++++++|+.+|+++|+++++++++.+.++++|+++++++++
T Consensus       139 ~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~  216 (343)
T cd05285         139 LEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT  216 (343)
T ss_pred             HHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc
Confidence            9998877 4788899875 8899999999999988999999999999999955999999999999999999999998876


Q ss_pred             CCCcc---HHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022          256 CGDKS---VSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF  331 (362)
Q Consensus       256 ~~~~~---~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  331 (362)
                         .+   +.+.+.+.+++ ++|++|||+|+...++..+++++++ |+++.+|....  ...+++..+..+++.+.++..
T Consensus       217 ---~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~  290 (343)
T cd05285         217 ---EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKP--EVTLPLSAASLREIDIRGVFR  290 (343)
T ss_pred             ---ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CCccCHHHHhhCCcEEEEecc
Confidence               44   37778777776 8999999999876689999999997 99999986432  245566677788899888643


Q ss_pred             cCCCccccHHHHHHHHHcCCcc
Q 018022          332 GGLKAKSDIPILLKRYMDKWSY  353 (362)
Q Consensus       332 ~~~~~~~~l~~~l~~~~~g~l~  353 (362)
                      .    .+.+++++++++++++.
T Consensus       291 ~----~~~~~~~~~~l~~~~l~  308 (343)
T cd05285         291 Y----ANTYPTAIELLASGKVD  308 (343)
T ss_pred             C----hHHHHHHHHHHHcCCCC
Confidence            2    27789999999999875

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=6e-37  Score=290.60  Aligned_cols=312  Identities=22%  Similarity=0.326  Sum_probs=264.8

Q ss_pred             eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 018022           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV   93 (362)
Q Consensus        17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~   93 (362)
                      |||+++...+.+  +++.+.+.|.+.+++|+||+.++++|++|+..+.|..+. ..+|.++|||++|+|+++|++++.|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (342)
T cd08266           1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK   80 (342)
T ss_pred             CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence            689999844322  788888888889999999999999999999988876542 35688999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      +||+|++.+..+|+.|.+|..++++.|+...+   .|....|                   +|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~g-------------------~~~~~~~~~~~~~~~~p~~  138 (342)
T cd08266          81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGI---LGEHVDG-------------------GYAEYVAVPARNLLPIPDN  138 (342)
T ss_pred             CCCEEEEccccccccchhhccccccccccccc---cccccCc-------------------ceeEEEEechHHceeCCCC
Confidence            99999999999999999999999999987543   4443344                   8999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN  252 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~  252 (362)
                      +++++++.+++.+.+||+++.+..++.++++++|+|+ +.+|++++++++..|+ +++++++++++.+.+++++.+.+++
T Consensus       139 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~  217 (342)
T cd08266         139 LSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVID  217 (342)
T ss_pred             CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEe
Confidence            9999999998899999998878889999999999998 7999999999999999 8999999999999998888888887


Q ss_pred             CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022          253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF  331 (362)
Q Consensus       253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  331 (362)
                      ..+   .++.+.+.+.+.+ ++|++++++|... +...++.++++ |+++.+|.... ....+++...+.+++++.++..
T Consensus       218 ~~~---~~~~~~~~~~~~~~~~d~~i~~~g~~~-~~~~~~~l~~~-G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  291 (342)
T cd08266         218 YRK---EDFVREVRELTGKRGVDVVVEHVGAAT-WEKSLKSLARG-GRLVTCGATTG-YEAPIDLRHVFWRQLSILGSTM  291 (342)
T ss_pred             cCC---hHHHHHHHHHhCCCCCcEEEECCcHHH-HHHHHHHhhcC-CEEEEEecCCC-CCCCcCHHHHhhcceEEEEEec
Confidence            665   5677777777666 8999999999865 88999999997 99999987533 2345666556778999988764


Q ss_pred             cCCCccccHHHHHHHHHcCCcccceeccc
Q 018022          332 GGLKAKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       332 ~~~~~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      ..   ..++.+++++++++.+++.+..+|
T Consensus       292 ~~---~~~~~~~~~~l~~~~l~~~~~~~~  317 (342)
T cd08266         292 GT---KAELDEALRLVFRGKLKPVIDSVF  317 (342)
T ss_pred             CC---HHHHHHHHHHHHcCCcccceeeeE
Confidence            33   468899999999999887654443

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.2e-36  Score=288.19  Aligned_cols=307  Identities=31%  Similarity=0.462  Sum_probs=259.3

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd   96 (362)
                      |||+++..+++++.++++|.|.+.++||+|||+++++|++|...+.|..+....|.++|+|++|+|+++|++++.|++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd   80 (332)
T cd08259           1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD   80 (332)
T ss_pred             CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence            68999988555699999999999999999999999999999999888766556788999999999999999999999999


Q ss_pred             EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 018022           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP  176 (362)
Q Consensus        97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~  176 (362)
                      +|+..+...|+.|.+|..++.++|++..   ..|....|                   +|++|++++...++++|+++++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g-------------------~~~~~~~v~~~~~~~ip~~~~~  138 (332)
T cd08259          81 RVILYYYIPCGKCEYCLSGEENLCRNRA---EYGEEVDG-------------------GFAEYVKVPERSLVKLPDNVSD  138 (332)
T ss_pred             EEEECCCCCCcCChhhhCCCcccCCCcc---ccccccCC-------------------eeeeEEEechhheEECCCCCCH
Confidence            9999999999999999999999998752   24443344                   9999999999999999999999


Q ss_pred             cchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCC
Q 018022          177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN  255 (362)
Q Consensus       177 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~  255 (362)
                      ++++.+++++.+||+++.. ..+.++++++|+|+ |.+|++++++++..|. +++++.+++++.+.+++++.+.+++.+ 
T Consensus       139 ~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~-  215 (332)
T cd08259         139 ESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGS-  215 (332)
T ss_pred             HHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecH-
Confidence            9999999999999998766 88999999999998 9999999999999999 889998889999999889988777543 


Q ss_pred             CCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCC
Q 018022          256 CGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK  335 (362)
Q Consensus       256 ~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  335 (362)
                         . +.+.+.+..  ++|++++++|... ...++++++++ |+++.+|..... ...++......++..+.++..   .
T Consensus       216 ---~-~~~~~~~~~--~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~---~  283 (332)
T cd08259         216 ---K-FSEDVKKLG--GADVVIELVGSPT-IEESLRSLNKG-GRLVLIGNVTPD-PAPLRPGLLILKEIRIIGSIS---A  283 (332)
T ss_pred             ---H-HHHHHHhcc--CCCEEEECCChHH-HHHHHHHhhcC-CEEEEEcCCCCC-CcCCCHHHHHhCCcEEEEecC---C
Confidence               2 555555543  6999999999876 88999999997 999999874322 222344444467888887642   2


Q ss_pred             ccccHHHHHHHHHcCCcccceeccc
Q 018022          336 AKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       336 ~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      ..+++++++++++++.|++.+..+|
T Consensus       284 ~~~~~~~~~~~~~~~~l~~~~~~~~  308 (332)
T cd08259         284 TKADVEEALKLVKEGKIKPVIDRVV  308 (332)
T ss_pred             CHHHHHHHHHHHHcCCCccceeEEE
Confidence            3578999999999999987665443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=9.2e-37  Score=288.25  Aligned_cols=291  Identities=23%  Similarity=0.357  Sum_probs=246.2

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd   96 (362)
                      |||+++.++++ +++++++.|+++++||+|||.++++|++|...+.|..+   .|.++|+|++|+|+++|++   +++||
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~   73 (319)
T cd08242           1 MKALVLDGGLD-LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK   73 (319)
T ss_pred             CeeEEEeCCCc-EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence            68999998875 99999999999999999999999999999998887653   5889999999999999987   78999


Q ss_pred             EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCC-CCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (362)
Q Consensus        97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~  175 (362)
                      +|...+..+|+.|.+|..+.+++|.....   .+. ..+|                   +|++|+.++.++++++|++++
T Consensus        74 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g-------------------~~~~~~~v~~~~~~~lP~~~~  131 (319)
T cd08242          74 RVVGEINIACGRCEYCRRGLYTHCPNRTV---LGIVDRDG-------------------AFAEYLTLPLENLHVVPDLVP  131 (319)
T ss_pred             eEEECCCcCCCCChhhhCcCcccCCCCcc---cCccCCCC-------------------ceEEEEEechHHeEECcCCCC
Confidence            99999999999999999999999987654   232 1234                   999999999999999999999


Q ss_pred             ccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCC
Q 018022          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN  255 (362)
Q Consensus       176 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~  255 (362)
                      .++++.+ ..+.++|. +.+..+++++++|+|+|+|.+|++++|+|+.+|+ ++++++.++++.+.++++|++.++++++
T Consensus       132 ~~~aa~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~  208 (319)
T cd08242         132 DEQAVFA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEA  208 (319)
T ss_pred             HHHhhhh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCccc
Confidence            9888764 35556665 4577889999999999889999999999999999 7999999999999999999998887654


Q ss_pred             CCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCC
Q 018022          256 CGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL  334 (362)
Q Consensus       256 ~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  334 (362)
                         .         +.+ ++|++||++|+...++.++++++++ |+++.++...  ....+++..+..+++++.++..+  
T Consensus       209 ---~---------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~--  271 (319)
T cd08242         209 ---E---------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYA--GPASFDLTKAVVNEITLVGSRCG--  271 (319)
T ss_pred             ---c---------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC--CCCccCHHHheecceEEEEEecc--
Confidence               1         233 8999999999877789999999997 9999987643  23566777778889999987532  


Q ss_pred             CccccHHHHHHHHHcCCcc--cceeccc
Q 018022          335 KAKSDIPILLKRYMDKWSY--VPFSGTR  360 (362)
Q Consensus       335 ~~~~~l~~~l~~~~~g~l~--~~~~~~~  360 (362)
                          .++++++++++++|+  +.+..+|
T Consensus       272 ----~~~~~~~~~~~~~l~~~~~~~~~~  295 (319)
T cd08242         272 ----PFAPALRLLRKGLVDVDPLITAVY  295 (319)
T ss_pred             ----cHHHHHHHHHcCCCChhhceEEEE
Confidence                388999999999994  3344443

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=2.1e-36  Score=288.63  Aligned_cols=306  Identities=27%  Similarity=0.450  Sum_probs=260.1

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd   96 (362)
                      |||+++.+++. +.+++.+.|++.++||+||+.++++|++|...+.+..+ ...|.++|+|++|+|+++|++++.|++||
T Consensus         1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd   78 (343)
T cd08236           1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-YHPPLVLGHEFSGTVEEVGSGVDDLAVGD   78 (343)
T ss_pred             CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-CCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence            78999999876 99999999999999999999999999999988877652 34578999999999999999999999999


Q ss_pred             EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 018022           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP  176 (362)
Q Consensus        97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~  176 (362)
                      +|+..+...|+.|.+|..+....|+....   +|...+|                   +|++|+.++.++++++|+++++
T Consensus        79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lP~~~~~  136 (343)
T cd08236          79 RVAVNPLLPCGKCEYCKKGEYSLCSNYDY---IGSRRDG-------------------AFAEYVSVPARNLIKIPDHVDY  136 (343)
T ss_pred             EEEEcCCCCCCCChhHHCcChhhCCCcce---EecccCC-------------------cccceEEechHHeEECcCCCCH
Confidence            99999999999999999999999977543   3333334                   9999999999999999999999


Q ss_pred             cchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCC
Q 018022          177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC  256 (362)
Q Consensus       177 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~  256 (362)
                      ++++++ ..+.+||+++. ...++++++|+|+|+|.+|.+++++|+.+|++.++++++++++.++++++|++.++++++ 
T Consensus       137 ~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~-  213 (343)
T cd08236         137 EEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE-  213 (343)
T ss_pred             HHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc-
Confidence            999887 47889999874 788999999999988999999999999999955999999999999999999999998876 


Q ss_pred             CCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCcc-ccCHHHHHhcCcEEEEeeccCC
Q 018022          257 GDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL-SLSSFEVLHSGKILMGSLFGGL  334 (362)
Q Consensus       257 ~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~-~~~~~~~~~~~~~i~g~~~~~~  334 (362)
                        .. .+.+.+..++ ++|++|||+|....+..++++++++ |+++.+|.......+ ..++..++.++.++.++.+...
T Consensus       214 --~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (343)
T cd08236         214 --ED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYS  289 (343)
T ss_pred             --cc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccc
Confidence              45 6677777776 8999999999877789999999997 999999975432112 2344556678999999876432


Q ss_pred             C--ccccHHHHHHHHHcCCcc
Q 018022          335 K--AKSDIPILLKRYMDKWSY  353 (362)
Q Consensus       335 ~--~~~~l~~~l~~~~~g~l~  353 (362)
                      .  ..+.+++++++++++++.
T Consensus       290 ~~~~~~~~~~~~~~~~~~~l~  310 (343)
T cd08236         290 APFPGDEWRTALDLLASGKIK  310 (343)
T ss_pred             cccchhhHHHHHHHHHcCCCC
Confidence            1  146788999999999986

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-36  Score=291.48  Aligned_cols=291  Identities=17%  Similarity=0.203  Sum_probs=235.0

Q ss_pred             CCcceeeEEEeccCC------CceEEEE---eecCC-CCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccc--cce
Q 018022           12 GKPIQCRAAIATAPG------EPLVIDE---VIVDP-PNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGH--EAI   79 (362)
Q Consensus        12 ~~~~~~ka~~~~~~~------~~l~l~~---~~~p~-~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~--e~~   79 (362)
                      .+.+++|++++...-      ++|++++   ++.|. +++|||||||.+++||+.|...+.+.......|.++|+  |++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~   83 (348)
T PLN03154          4 GQVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGF   83 (348)
T ss_pred             CccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEee
Confidence            445667888885421      1188877   46663 48999999999999999987654432222345889998  889


Q ss_pred             EEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeee
Q 018022           80 GVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEY  159 (362)
Q Consensus        80 G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y  159 (362)
                      |+|+.+|+++++|++||+|+..                                                    |+|+||
T Consensus        84 G~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------~~~aey  111 (348)
T PLN03154         84 GVSKVVDSDDPNFKPGDLISGI----------------------------------------------------TGWEEY  111 (348)
T ss_pred             EEEEEEecCCCCCCCCCEEEec----------------------------------------------------CCcEEE
Confidence            9999999999999999999621                                                    289999


Q ss_pred             EEeecCc--eEE--cCCCCCcc-chhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEc
Q 018022          160 TVLDIAH--VVK--VDPTVPPN-RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD  233 (362)
Q Consensus       160 ~~v~~~~--~~~--~P~~l~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~  233 (362)
                      +.++.+.  +++  +|++++++ +++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+++|+ +|++++
T Consensus       112 ~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~  190 (348)
T PLN03154        112 SLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSA  190 (348)
T ss_pred             EEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEc
Confidence            9998753  544  48999986 677889999999999878889999999999998 9999999999999999 899999


Q ss_pred             CCchHHHHHH-hcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCcc
Q 018022          234 VISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL  312 (362)
Q Consensus       234 ~~~~~~~~~~-~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~  312 (362)
                      +++++.+.++ ++|+++++++++  ..++.+.+++++++++|++||++|+. .+..++++++++ |+++.+|..... ..
T Consensus       191 ~~~~k~~~~~~~lGa~~vi~~~~--~~~~~~~i~~~~~~gvD~v~d~vG~~-~~~~~~~~l~~~-G~iv~~G~~~~~-~~  265 (348)
T PLN03154        191 GSSQKVDLLKNKLGFDEAFNYKE--EPDLDAALKRYFPEGIDIYFDNVGGD-MLDAALLNMKIH-GRIAVCGMVSLN-SL  265 (348)
T ss_pred             CCHHHHHHHHHhcCCCEEEECCC--cccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHHhccC-CEEEEECccccC-CC
Confidence            9999999987 799999999864  13677888887766899999999975 589999999997 999999975322 11


Q ss_pred             -----ccCHHHHHhcCcEEEEeeccCCC--ccccHHHHHHHHHcCCcccceeccc
Q 018022          313 -----SLSSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       313 -----~~~~~~~~~~~~~i~g~~~~~~~--~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                           .+++..++.|++++.|++.+.+.  ..+.++++++++++|+|++.++.+|
T Consensus       266 ~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~~~  320 (348)
T PLN03154        266 SASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDMSE  320 (348)
T ss_pred             CCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceeccc
Confidence                 13566788899999998765432  1356889999999999999887765

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=2.6e-36  Score=286.67  Aligned_cols=303  Identities=29%  Similarity=0.469  Sum_probs=258.6

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd   96 (362)
                      |||+++.+++. +++++.+.|++.++||+||+.++++|+.|...+.|..+. .+|.++|+|++|+|+++|+++++|++||
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd   78 (334)
T cd08234           1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGD   78 (334)
T ss_pred             CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCC
Confidence            78999999886 999999999999999999999999999999988887653 3788999999999999999999999999


Q ss_pred             EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 018022           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP  176 (362)
Q Consensus        97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~  176 (362)
                      +|+..+...|++|.+|..++.++|+....   +|...+|                   +|++|+.++.++++++|+++++
T Consensus        79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~lP~~~~~  136 (334)
T cd08234          79 RVAVDPNIYCGECFYCRRGRPNLCENLTA---VGVTRNG-------------------GFAEYVVVPAKQVYKIPDNLSF  136 (334)
T ss_pred             EEEEcCCcCCCCCccccCcChhhCCCcce---eccCCCC-------------------cceeEEEecHHHcEECcCCCCH
Confidence            99999999999999999999999977642   3333344                   9999999999999999999999


Q ss_pred             cchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCC
Q 018022          177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC  256 (362)
Q Consensus       177 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~  256 (362)
                      .+++++ ..+.++++++ +.++++++++|+|+|+|.+|.+++++|+..|+++|+++++++++.+.++++|++++++.++ 
T Consensus       137 ~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-  213 (334)
T cd08234         137 EEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR-  213 (334)
T ss_pred             HHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC-
Confidence            998876 5788899886 7889999999999988999999999999999955899999999999999999988888766 


Q ss_pred             CCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCCc
Q 018022          257 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA  336 (362)
Q Consensus       257 ~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  336 (362)
                        .++... +...+.++|++||++|....+...+++++++ |+++.+|.........++...+..+++++.+....    
T Consensus       214 --~~~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  285 (334)
T cd08234         214 --EDPEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN----  285 (334)
T ss_pred             --CCHHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----
Confidence              445444 3333338999999999877789999999997 99999987543334556666666688999887532    


Q ss_pred             cccHHHHHHHHHcCCccc
Q 018022          337 KSDIPILLKRYMDKWSYV  354 (362)
Q Consensus       337 ~~~l~~~l~~~~~g~l~~  354 (362)
                      .+.+++++++++++++.+
T Consensus       286 ~~~~~~~~~~~~~~~l~~  303 (334)
T cd08234         286 PYTFPRAIALLESGKIDV  303 (334)
T ss_pred             HHHHHHHHHHHHcCCCCh
Confidence            467999999999999875

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=2.6e-36  Score=286.34  Aligned_cols=303  Identities=27%  Similarity=0.406  Sum_probs=257.3

Q ss_pred             eEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCCE
Q 018022           18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDV   97 (362)
Q Consensus        18 ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~   97 (362)
                      ||+++.+++..+++++.|.|.+.+++|+||+.++++|++|...+.+......+|.++|+|++|+|+++|+++++|++||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~   80 (330)
T cd08245           1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR   80 (330)
T ss_pred             CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence            68999999766999999999999999999999999999999998887655567889999999999999999999999999


Q ss_pred             EEeeCC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 018022           98 VIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP  176 (362)
Q Consensus        98 V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~  176 (362)
                      |++.+. .+|++|.+|.++..++|++..+   ++....|                   +|++|+.++.++++++|+++++
T Consensus        81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~~~~  138 (330)
T cd08245          81 VGVGWLVGSCGRCEYCRRGLENLCQKAVN---TGYTTQG-------------------GYAEYMVADAEYTVLLPDGLPL  138 (330)
T ss_pred             EEEccccCCCCCChhhhCcCcccCcCccc---cCcccCC-------------------ccccEEEEcHHHeEECCCCCCH
Confidence            988665 6799999999999999998665   3332334                   8999999999999999999999


Q ss_pred             cchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCC
Q 018022          177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC  256 (362)
Q Consensus       177 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~  256 (362)
                      .+++.+.+.+.+||+++.. .+++++++|+|+|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++... 
T Consensus       139 ~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~-  215 (330)
T cd08245         139 AQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA-  215 (330)
T ss_pred             HHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC-
Confidence            9999988899999998744 789999999999988899999999999999 8999999999999999999988887655 


Q ss_pred             CCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCCc
Q 018022          257 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA  336 (362)
Q Consensus       257 ~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  336 (362)
                        .+....    ..+++|++||+++.......++++++++ |+++.+|... ......+...++.++.++.++..+.   
T Consensus       216 --~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---  284 (330)
T cd08245         216 --ELDEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPE-SPPFSPDIFPLIMKRQSIAGSTHGG---  284 (330)
T ss_pred             --cchHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCC-CCccccchHHHHhCCCEEEEeccCC---
Confidence              333332    2237999999998877789999999997 9999998642 2233333556778899998886543   


Q ss_pred             cccHHHHHHHHHcCCcccce
Q 018022          337 KSDIPILLKRYMDKWSYVPF  356 (362)
Q Consensus       337 ~~~l~~~l~~~~~g~l~~~~  356 (362)
                      .+.+++++++++++.+.+.+
T Consensus       285 ~~~~~~~~~ll~~~~l~~~~  304 (330)
T cd08245         285 RADLQEALDFAAEGKVKPMI  304 (330)
T ss_pred             HHHHHHHHHHHHcCCCcceE
Confidence            47889999999999987643

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=4.7e-36  Score=284.50  Aligned_cols=297  Identities=25%  Similarity=0.353  Sum_probs=253.2

Q ss_pred             eeEEEeccCCC----ceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCC
Q 018022           17 CRAAIATAPGE----PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGV   92 (362)
Q Consensus        17 ~ka~~~~~~~~----~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~   92 (362)
                      |||+++.+++.    ++++++.+.|.+.++||+||+.++++|++|+..+.|..+...+|.++|||++|+|+++|+++.+|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF   80 (329)
T ss_pred             CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence            78999998883    48888888888999999999999999999999988876655678899999999999999999999


Q ss_pred             CCCCEEEeeCC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 018022           93 VEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (362)
Q Consensus        93 ~~Gd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P  171 (362)
                      ++||+|++.+. .+|++|..|+.++.++|+...+   .|...+|                   +|++|+.++.+.++++|
T Consensus        81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp  138 (329)
T cd08298          81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARF---TGYTVDG-------------------GYAEYMVADERFAYPIP  138 (329)
T ss_pred             cCCCEEEEeccCCCCCCChhHhCcChhhCCCccc---cccccCC-------------------ceEEEEEecchhEEECC
Confidence            99999987654 6799999999999999987765   4444445                   99999999999999999


Q ss_pred             CCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE
Q 018022          172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV  251 (362)
Q Consensus       172 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv  251 (362)
                      +++++.+++.+.+.+.+||+++ +.++++++++|+|+|+|++|++++++++..|+ +|+++++++++++.++++|++.++
T Consensus       139 ~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~  216 (329)
T cd08298         139 EDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAG  216 (329)
T ss_pred             CCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEe
Confidence            9999999999999999999987 88999999999999999999999999999999 999999999999999999998888


Q ss_pred             cCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022          252 NSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF  331 (362)
Q Consensus       252 ~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  331 (362)
                      +.+.   .         ..+++|+++++.+....++.++++++++ |+++.+|... .....+++.. +.++..+.++..
T Consensus       217 ~~~~---~---------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~-~~~~~~i~~~~~  281 (329)
T cd08298         217 DSDD---L---------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHM-SDIPAFDYEL-LWGEKTIRSVAN  281 (329)
T ss_pred             ccCc---c---------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCC-CCCCccchhh-hhCceEEEEecC
Confidence            7654   1         1237999999988777799999999997 9999998632 2222344433 446777777653


Q ss_pred             cCCCccccHHHHHHHHHcCCcccc
Q 018022          332 GGLKAKSDIPILLKRYMDKWSYVP  355 (362)
Q Consensus       332 ~~~~~~~~l~~~l~~~~~g~l~~~  355 (362)
                      .   ..+.+++++++++++.+++.
T Consensus       282 ~---~~~~~~~~~~l~~~~~l~~~  302 (329)
T cd08298         282 L---TRQDGEEFLKLAAEIPIKPE  302 (329)
T ss_pred             C---CHHHHHHHHHHHHcCCCCce
Confidence            2   24778999999999998874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.7e-36  Score=285.41  Aligned_cols=294  Identities=23%  Similarity=0.319  Sum_probs=240.4

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCC-----------CCCCCccccccceEEEEEe
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-----------PAVFPRILGHEAIGVVESV   85 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~-----------~~~~p~~~G~e~~G~Vv~v   85 (362)
                      |||+++.++  .+++++++.|++.++||+|||.++++|+.|...+.|...           ...+|.++|+|++|+|+++
T Consensus         1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v   78 (341)
T cd08262           1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY   78 (341)
T ss_pred             CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence            789999877  499999999999999999999999999999998877321           2235889999999999999


Q ss_pred             CCCCCC-CCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec
Q 018022           86 GENVDG-VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI  164 (362)
Q Consensus        86 G~~v~~-~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~  164 (362)
                      |+++++ |++||+|+..+...|+.|..|..+         +    ....+                   |+|++|+.++.
T Consensus        79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~---------~----~~~~~-------------------g~~~~~~~v~~  126 (341)
T cd08262          79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIG---------L----SPEAP-------------------GGYAEYMLLSE  126 (341)
T ss_pred             CCCCcCCCCCCCEEEecCCcCCCCChhhhCC---------C----CcCCC-------------------CceeeeEEech
Confidence            999987 999999999999999999999321         0    00112                   39999999999


Q ss_pred             CceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh
Q 018022          165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR  244 (362)
Q Consensus       165 ~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~  244 (362)
                      +.++++|+++++++++ +...+++||++ ....+++++++|||+|+|.+|.+++|+|+.+|++.++++++++++.+++++
T Consensus       127 ~~~~~lP~~~s~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~  204 (341)
T cd08262         127 ALLLRVPDGLSMEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALA  204 (341)
T ss_pred             HHeEECCCCCCHHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence            9999999999999887 45588899997 578899999999999889999999999999999778889989999999999


Q ss_pred             cCCcEEEcCCCCCCccHHH---HHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHH
Q 018022          245 FGVTEFVNSKNCGDKSVSQ---IIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVL  320 (362)
Q Consensus       245 ~g~~~vv~~~~~~~~~~~~---~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~  320 (362)
                      +|+++++++++   .+..+   .+...+.+ ++|++||++|+...+..++++++++ |+++.+|......  .+.....+
T Consensus       205 ~g~~~~i~~~~---~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~--~~~~~~~~  278 (341)
T cd08262         205 MGADIVVDPAA---DSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESD--NIEPALAI  278 (341)
T ss_pred             cCCcEEEcCCC---cCHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCC--ccCHHHHh
Confidence            99999998765   32211   34444555 8999999999865588899999997 9999999753222  23333334


Q ss_pred             hcCcEEEEeeccCCCccccHHHHHHHHHcCCcccc
Q 018022          321 HSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVP  355 (362)
Q Consensus       321 ~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~  355 (362)
                      .+++.+.++...   ..++++++++++++|+|++.
T Consensus       279 ~~~~~~~~~~~~---~~~~~~~~~~l~~~g~i~~~  310 (341)
T cd08262         279 RKELTLQFSLGY---TPEEFADALDALAEGKVDVA  310 (341)
T ss_pred             hcceEEEEEecc---cHHHHHHHHHHHHcCCCChH
Confidence            578888765432   24689999999999999863

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=5e-36  Score=286.04  Aligned_cols=304  Identities=25%  Similarity=0.380  Sum_probs=251.6

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCC---CCCCCCccccccceEEEEEeCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD---FPAVFPRILGHEAIGVVESVGENVDGVV   93 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~---~~~~~p~~~G~e~~G~Vv~vG~~v~~~~   93 (362)
                      |||+++..+++.+++.+.+.|.|.++|++|||+++++|+.|+..+.+..   ....+|.++|+|++|+|+.+|++++.|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~   80 (341)
T cd05281           1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK   80 (341)
T ss_pred             CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence            6899999888679999999999999999999999999999988764421   1234577899999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      +||+|+..+..+|+.|..|..+..++|....+   .|....|                   +|++|++++.+.++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~v~v~~~~~~~lP~~  138 (341)
T cd05281          81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTKI---LGVDTDG-------------------CFAEYVVVPEENLWKNDKD  138 (341)
T ss_pred             CCCEEEECCccCCCCChHHHCcCcccCcccce---EeccCCC-------------------cceEEEEechHHcEECcCC
Confidence            99999999999999999999999999976432   3333334                   9999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  253 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~  253 (362)
                      ++.+.+ ++...+.++++++.  ....+|++|+|.|+|.+|++++++|+.+|..+|++++++++|.++++++|+++++++
T Consensus       139 ~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~  215 (341)
T cd05281         139 IPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINP  215 (341)
T ss_pred             CCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCc
Confidence            998555 44457788887653  456789999999889999999999999998678888888999999999999999987


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH-HHHhcCcEEEEeec
Q 018022          254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF-EVLHSGKILMGSLF  331 (362)
Q Consensus       254 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~-~~~~~~~~i~g~~~  331 (362)
                      +.   .++. .+.++.++ ++|++||++|....+..++++++++ |+++.+|....  ...+++. .+..+++.+.+...
T Consensus       216 ~~---~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~  288 (341)
T cd05281         216 RE---EDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPG--PVDIDLNNLVIFKGLTVQGITG  288 (341)
T ss_pred             cc---ccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCC--CcccccchhhhccceEEEEEec
Confidence            76   5677 78887776 9999999999887789999999997 99999987533  2333332 36667888887652


Q ss_pred             cCCCccccHHHHHHHHHcCCccc
Q 018022          332 GGLKAKSDIPILLKRYMDKWSYV  354 (362)
Q Consensus       332 ~~~~~~~~l~~~l~~~~~g~l~~  354 (362)
                      ..  ..+.+.+++++++++.+++
T Consensus       289 ~~--~~~~~~~~~~~l~~~~l~~  309 (341)
T cd05281         289 RK--MFETWYQVSALLKSGKVDL  309 (341)
T ss_pred             CC--cchhHHHHHHHHHcCCCCh
Confidence            22  2467889999999999863

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=2.6e-36  Score=287.72  Aligned_cols=289  Identities=19%  Similarity=0.186  Sum_probs=234.7

Q ss_pred             ceeeEEEeccCCC-ceEEEEeec----CCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccc--eEEEEEeC
Q 018022           15 IQCRAAIATAPGE-PLVIDEVIV----DPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEA--IGVVESVG   86 (362)
Q Consensus        15 ~~~ka~~~~~~~~-~l~l~~~~~----p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~--~G~Vv~vG   86 (362)
                      ..+|++....+.. .|++.+.++    |+|+++||||||++++||+.|...+.|.... ..+|.++|++.  .|.+..+|
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~   85 (338)
T cd08295           6 VILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVD   85 (338)
T ss_pred             EEEecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEe
Confidence            4567777655553 399998887    8899999999999999999999988875432 35688899754  45666688


Q ss_pred             CCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec-C
Q 018022           87 ENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI-A  165 (362)
Q Consensus        87 ~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~-~  165 (362)
                      +++++|++||+|+..                                                    |+|+||+++|. .
T Consensus        86 ~~v~~~~vGd~V~~~----------------------------------------------------g~~aey~~v~~~~  113 (338)
T cd08295          86 SGNPDFKVGDLVWGF----------------------------------------------------TGWEEYSLIPRGQ  113 (338)
T ss_pred             cCCCCCCCCCEEEec----------------------------------------------------CCceeEEEecchh
Confidence            888899999999621                                                    28999999999 7


Q ss_pred             ceEEcC-CCCCcc-chhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH
Q 018022          166 HVVKVD-PTVPPN-RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG  242 (362)
Q Consensus       166 ~~~~~P-~~l~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~  242 (362)
                      .++++| ++++++ +++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+++
T Consensus       114 ~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~  192 (338)
T cd08295         114 DLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLL  192 (338)
T ss_pred             ceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence            999995 678886 788889899999999878889999999999998 9999999999999999 899999999999999


Q ss_pred             Hh-cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCc----cccCHH
Q 018022          243 KR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ----LSLSSF  317 (362)
Q Consensus       243 ~~-~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~----~~~~~~  317 (362)
                      ++ +|+++++++.+  +.++.+.+++.+++++|++||++|+. .+..++++++++ |+++.+|.......    ...++.
T Consensus       193 ~~~lGa~~vi~~~~--~~~~~~~i~~~~~~gvd~v~d~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~  268 (338)
T cd08295         193 KNKLGFDDAFNYKE--EPDLDAALKRYFPNGIDIYFDNVGGK-MLDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLL  268 (338)
T ss_pred             HHhcCCceeEEcCC--cccHHHHHHHhCCCCcEEEEECCCHH-HHHHHHHHhccC-cEEEEecccccCCCCCCCCccCHH
Confidence            98 99999998754  14678888877655899999999985 489999999997 99999997432211    113456


Q ss_pred             HHHhcCcEEEEeeccCCCc--cccHHHHHHHHHcCCcccceeccc
Q 018022          318 EVLHSGKILMGSLFGGLKA--KSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       318 ~~~~~~~~i~g~~~~~~~~--~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      .++.+++++.+++.+.+..  .+.++++++++++|++++.+..+|
T Consensus       269 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~  313 (338)
T cd08295         269 NIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIAD  313 (338)
T ss_pred             HHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeeccc
Confidence            6777889999876554321  245788999999999998766554

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=5.9e-36  Score=285.07  Aligned_cols=299  Identities=27%  Similarity=0.404  Sum_probs=244.8

Q ss_pred             EeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhh-cCCC--CCCCCccccccceEEEEEeCCCCCCCCCCCE
Q 018022           21 IATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDF--PAVFPRILGHEAIGVVESVGENVDGVVEGDV   97 (362)
Q Consensus        21 ~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~-g~~~--~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~   97 (362)
                      ++++.+. +++++.+.|.++++||+|||.++++|++|...+. +...  ...+|.++|+|++|+|+++|+++++|++||+
T Consensus         2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~   80 (339)
T cd08232           2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR   80 (339)
T ss_pred             eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence            5677766 9999999999999999999999999999988763 3221  1245789999999999999999999999999


Q ss_pred             EEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 018022           98 VIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP  176 (362)
Q Consensus        98 V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~  176 (362)
                      |+..+..+|+.|.+|..+..+.|.++.+   ++.. .+               .+..|+|++|+.++.+.++++|++++.
T Consensus        81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~---------------~~~~g~~~~~v~v~~~~~~~iP~~~~~  142 (339)
T cd08232          81 VAVNPSRPCGTCDYCRAGRPNLCLNMRF---LGSAMRF---------------PHVQGGFREYLVVDASQCVPLPDGLSL  142 (339)
T ss_pred             EEEccCCcCCCChHHhCcCcccCccccc---eeecccc---------------CCCCCceeeEEEechHHeEECcCCCCH
Confidence            9999999999999999999999998644   2210 00               011249999999999999999999999


Q ss_pred             cchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCC
Q 018022          177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC  256 (362)
Q Consensus       177 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~  256 (362)
                      ++++. ..++.++|+++.....+ ++++|||.|+|.+|++++++|+.+|+.+++++++++++.++++++|.++++++++ 
T Consensus       143 ~~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~-  219 (339)
T cd08232         143 RRAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR-  219 (339)
T ss_pred             HHhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc-
Confidence            99876 45888999987555555 9999999988999999999999999877999999899999999999999998765 


Q ss_pred             CCccHHHHHHhhc-CC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCC
Q 018022          257 GDKSVSQIIIDMT-DG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL  334 (362)
Q Consensus       257 ~~~~~~~~i~~~~-~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  334 (362)
                        .++    .++. .. ++|++||++|+...++.++++|+++ |+++.+|...  ....+++..++.+++++.+...   
T Consensus       220 --~~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~---  287 (339)
T cd08232         220 --DPL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLG--GPVPLPLNALVAKELDLRGSFR---  287 (339)
T ss_pred             --hhh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC--CCccCcHHHHhhcceEEEEEec---
Confidence              332    2222 22 6999999999876689999999997 9999998643  3345566666778888888752   


Q ss_pred             CccccHHHHHHHHHcCCccc
Q 018022          335 KAKSDIPILLKRYMDKWSYV  354 (362)
Q Consensus       335 ~~~~~l~~~l~~~~~g~l~~  354 (362)
                       ..+++++++++++++.+++
T Consensus       288 -~~~~~~~~~~~~~~~~i~~  306 (339)
T cd08232         288 -FDDEFAEAVRLLAAGRIDV  306 (339)
T ss_pred             -CHHHHHHHHHHHHcCCCCc
Confidence             2467999999999999864

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1e-35  Score=284.40  Aligned_cols=300  Identities=24%  Similarity=0.274  Sum_probs=243.4

Q ss_pred             eeEEEeccCCCc--eEEEE-eecCCCCCCeEEEEEeeeecchhhhhhhhcCCC--------------------CCCCCcc
Q 018022           17 CRAAIATAPGEP--LVIDE-VIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF--------------------PAVFPRI   73 (362)
Q Consensus        17 ~ka~~~~~~~~~--l~l~~-~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~--------------------~~~~p~~   73 (362)
                      |||+++..++.+  +.+.+ ++.|.+.+++|+|||.++++|++|+.++.|..+                    ...+|.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~   80 (350)
T cd08274           1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI   80 (350)
T ss_pred             CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence            689999877643  55543 577788999999999999999999998876542                    2356899


Q ss_pred             ccccceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccc
Q 018022           74 LGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSV  153 (362)
Q Consensus        74 ~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~  153 (362)
                      +|||++|+|+++|+++++|++||+|+..+...|+.|..|.     .|   .+   .|...+|                  
T Consensus        81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~-----~~---~~---~~~~~~g------------------  131 (350)
T cd08274          81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPA-----DI---DY---IGSERDG------------------  131 (350)
T ss_pred             cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccc-----cc---cc---cCCCCCc------------------
Confidence            9999999999999999999999999998888888776532     11   11   2222233                  


Q ss_pred             cceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEE
Q 018022          154 SSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGV  232 (362)
Q Consensus       154 g~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~  232 (362)
                       +|++|+.++...++++|+++++.+++.+.+.+.+||+++ ...+++++++|||+|+ |.+|++++++|+.+|+ +++++
T Consensus       132 -~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~  208 (350)
T cd08274         132 -GFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAV  208 (350)
T ss_pred             -cceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEE
Confidence             999999999999999999999999999999999999976 7788999999999998 9999999999999999 78888


Q ss_pred             cCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCc
Q 018022          233 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ  311 (362)
Q Consensus       233 ~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~  311 (362)
                      ++++ +++.++++|++.+++...   ..+.+  ...+.+ ++|++||++|+.. ++.++++++++ |+++.+|.. ....
T Consensus       209 ~~~~-~~~~~~~~g~~~~~~~~~---~~~~~--~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~-~~~~  279 (350)
T cd08274         209 AGAA-KEEAVRALGADTVILRDA---PLLAD--AKALGGEPVDVVADVVGGPL-FPDLLRLLRPG-GRYVTAGAI-AGPV  279 (350)
T ss_pred             eCch-hhHHHHhcCCeEEEeCCC---ccHHH--HHhhCCCCCcEEEecCCHHH-HHHHHHHhccC-CEEEEeccc-CCcc
Confidence            7655 888889999976666544   34434  445555 8999999999864 89999999997 999999864 2223


Q ss_pred             cccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHHHcCCcccceeccc
Q 018022          312 LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       312 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      ..+++..++.+++++.++....   .+.++++++++++++|++.+..+|
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~~~~~~~  325 (350)
T cd08274         280 VELDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGEIRPVVAKTF  325 (350)
T ss_pred             ccCCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCCccccccccc
Confidence            5677777788899999987542   578999999999999987655544

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=2e-35  Score=281.85  Aligned_cols=298  Identities=26%  Similarity=0.410  Sum_probs=249.2

Q ss_pred             ccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCC---CCCCCCccccccceEEEEEeCCCCCCCCCCCEEE
Q 018022           23 TAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD---FPAVFPRILGHEAIGVVESVGENVDGVVEGDVVI   99 (362)
Q Consensus        23 ~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~---~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~   99 (362)
                      .++++.+++++.|.|.|.++||+||+.++++|++|..++.+..   ....+|.++|+|++|+|+++|+++++|++||+|+
T Consensus         5 ~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~   84 (340)
T TIGR00692         5 TKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS   84 (340)
T ss_pred             ccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence            4677779999999999999999999999999999998765542   1234577899999999999999999999999999


Q ss_pred             eeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccch
Q 018022          100 PHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRA  179 (362)
Q Consensus       100 ~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~a  179 (362)
                      ..+...|+.|..|..+..++|...++   .|....|                   +|++|+.++.+.++++|++++.+++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp~~~~~~~a  142 (340)
T TIGR00692        85 VETHIVCGKCYACRRGQYHVCQNTKI---FGVDTDG-------------------CFAEYAVVPAQNIWKNPKSIPPEYA  142 (340)
T ss_pred             ECCcCCCCCChhhhCcChhhCcCcce---EeecCCC-------------------cceeEEEeehHHcEECcCCCChHhh
Confidence            99999999999999999999998755   2322334                   9999999999999999999998655


Q ss_pred             hccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCc
Q 018022          180 CLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDK  259 (362)
Q Consensus       180 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  259 (362)
                      + +...+.+|++++  .....+|++|+|.|+|.+|.+++++|+.+|.+.|+++++++++.++++++|++++++..+   .
T Consensus       143 ~-~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~  216 (340)
T TIGR00692       143 T-IQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK---E  216 (340)
T ss_pred             h-hcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc---c
Confidence            4 556888888865  345789999999888999999999999999955889988889999999999998998876   6


Q ss_pred             cHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH-HHHhcCcEEEEeeccCCCcc
Q 018022          260 SVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF-EVLHSGKILMGSLFGGLKAK  337 (362)
Q Consensus       260 ~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~  337 (362)
                      ++.+.+.+++++ ++|++|||+|+...+...+++++++ |+++.+|....  ..++++. .++.+++++.+...  ....
T Consensus       217 ~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~  291 (340)
T TIGR00692       217 DVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPG--KVTIDFTNKVIFKGLTIYGITG--RHMF  291 (340)
T ss_pred             CHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCC--CcccchhhhhhhcceEEEEEec--CCch
Confidence            788888888776 8999999999877789999999997 99999997532  2333343 56778888887652  1224


Q ss_pred             ccHHHHHHHHHcCCcc
Q 018022          338 SDIPILLKRYMDKWSY  353 (362)
Q Consensus       338 ~~l~~~l~~~~~g~l~  353 (362)
                      +.+.++++++++++++
T Consensus       292 ~~~~~~~~~l~~~~l~  307 (340)
T TIGR00692       292 ETWYTVSRLIQSGKLD  307 (340)
T ss_pred             hhHHHHHHHHHcCCCC
Confidence            6688999999999987

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=1.9e-35  Score=280.30  Aligned_cols=269  Identities=19%  Similarity=0.188  Sum_probs=221.1

Q ss_pred             eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEeeCCCCCCC
Q 018022           29 LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTE  108 (362)
Q Consensus        29 l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~  108 (362)
                      |++++++.|+|++|||||||.+++||+.++.   |.+.....|.++|.|++|+|+++|+   +|++||||+..       
T Consensus        19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~-------   85 (325)
T TIGR02825        19 FELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS-------   85 (325)
T ss_pred             eEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe-------
Confidence            8899999999999999999999999997653   4333334578999999999999874   59999999732       


Q ss_pred             CccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEc----CCCCCccch-hccc
Q 018022          109 CVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV----DPTVPPNRA-CLLS  183 (362)
Q Consensus       109 c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~----P~~l~~~~a-a~~~  183 (362)
                                                                   ++|++|+.++.+.+.++    |++++++++ ++++
T Consensus        86 ---------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~  120 (325)
T TIGR02825        86 ---------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVG  120 (325)
T ss_pred             ---------------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcc
Confidence                                                         26899999999888877    899999987 6788


Q ss_pred             cchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHH
Q 018022          184 CGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVS  262 (362)
Q Consensus       184 ~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~  262 (362)
                      +++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|+++++++++  ..++.
T Consensus       121 ~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~--~~~~~  197 (325)
T TIGR02825       121 MPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT--VKSLE  197 (325)
T ss_pred             cHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc--cccHH
Confidence            899999999888899999999999996 9999999999999999 8999999999999999999999999875  12566


Q ss_pred             HHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCC---Cccc--cCHHHHHhcCcEEEEeeccCCC--
Q 018022          263 QIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG---SQLS--LSSFEVLHSGKILMGSLFGGLK--  335 (362)
Q Consensus       263 ~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~---~~~~--~~~~~~~~~~~~i~g~~~~~~~--  335 (362)
                      +.++...++++|++||++|+.. +..++++++++ |+++.+|.....   ...+  .....++.+++++.++....+.  
T Consensus       198 ~~~~~~~~~gvdvv~d~~G~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  275 (325)
T TIGR02825       198 ETLKKASPDGYDCYFDNVGGEF-SNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGE  275 (325)
T ss_pred             HHHHHhCCCCeEEEEECCCHHH-HHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhh
Confidence            6666665458999999999876 79999999997 999999964321   1112  2344567788999887654332  


Q ss_pred             -ccccHHHHHHHHHcCCcccceeccc
Q 018022          336 -AKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       336 -~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                       ..+.++++++++++|++++.+..+|
T Consensus       276 ~~~~~~~~~~~l~~~g~l~~~~~~~~  301 (325)
T TIGR02825       276 VRQKALKELLKWVLEGKIQYKEYVIE  301 (325)
T ss_pred             hhHHHHHHHHHHHHCCCcccceeccc
Confidence             1357899999999999998876655

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=2.1e-35  Score=279.80  Aligned_cols=281  Identities=19%  Similarity=0.171  Sum_probs=228.6

Q ss_pred             eeeEEEeccC--CCc----eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCC
Q 018022           16 QCRAAIATAP--GEP----LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV   89 (362)
Q Consensus        16 ~~ka~~~~~~--~~~----l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v   89 (362)
                      +|||+++.+.  +.+    +++++++.|+|+++||+|||.+++||+.|.....   ...++|.++|+|++|+|++   .+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~---~~~~~p~v~G~e~~G~V~~---~~   75 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSK---RLNEGDTMIGTQVAKVIES---KN   75 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhcccc---cCCCCCcEecceEEEEEec---CC
Confidence            5899999983  332    8899999999999999999999999988754221   1124689999999999996   44


Q ss_pred             CCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC---c
Q 018022           90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA---H  166 (362)
Q Consensus        90 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~---~  166 (362)
                      ++|++||+|+..                                                    ++|++|+.++.+   .
T Consensus        76 ~~~~~Gd~V~~~----------------------------------------------------~~~~~~~~~~~~~~~~  103 (329)
T cd08294          76 SKFPVGTIVVAS----------------------------------------------------FGWRTHTVSDGKDQPD  103 (329)
T ss_pred             CCCCCCCEEEee----------------------------------------------------CCeeeEEEECCccccc
Confidence            679999999732                                                    278999999999   9


Q ss_pred             eEEcCCCCC--c---cchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHH
Q 018022          167 VVKVDPTVP--P---NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE  240 (362)
Q Consensus       167 ~~~~P~~l~--~---~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~  240 (362)
                      ++++|++++  +   ..++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+
T Consensus       104 ~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~  182 (329)
T cd08294         104 LYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVA  182 (329)
T ss_pred             eEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Confidence            999999988  2   2234567799999999888899999999999986 9999999999999999 8999999999999


Q ss_pred             HHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCC---c--cccC
Q 018022          241 IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS---Q--LSLS  315 (362)
Q Consensus       241 ~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~---~--~~~~  315 (362)
                      +++++|+++++++++   +++.+.+++++++++|++||++|+.. +..++++++++ |+++.+|......   .  ....
T Consensus       183 ~l~~~Ga~~vi~~~~---~~~~~~v~~~~~~gvd~vld~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~  257 (329)
T cd08294         183 WLKELGFDAVFNYKT---VSLEEALKEAAPDGIDCYFDNVGGEF-SSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYV  257 (329)
T ss_pred             HHHHcCCCEEEeCCC---ccHHHHHHHHCCCCcEEEEECCCHHH-HHHHHHhhccC-CEEEEEcchhccCCCCCCcCccc
Confidence            999999999999887   78888888877668999999999854 89999999997 9999998532111   1  1233


Q ss_pred             HHHHHhcCcEEEEeeccCCC--ccccHHHHHHHHHcCCcccceeccc
Q 018022          316 SFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       316 ~~~~~~~~~~i~g~~~~~~~--~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      ...++.+++++.+++...+.  ..+.++++++++++|+|++.+..+|
T Consensus       258 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~  304 (329)
T cd08294         258 QETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYREHVTE  304 (329)
T ss_pred             HHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCccccc
Confidence            45677789999987654431  1345788999999999998765544

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=3.2e-35  Score=280.72  Aligned_cols=275  Identities=19%  Similarity=0.174  Sum_probs=214.7

Q ss_pred             eEEEEeecCCCC-CCeEEEEEeeeecchhhhhhhh---cCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEeeCCC
Q 018022           29 LVIDEVIVDPPN-SHEVRVRIICTSLCHSDVTFWK---MKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLA  104 (362)
Q Consensus        29 l~l~~~~~p~~~-~~eVlVkv~~~~i~~~d~~~~~---g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~  104 (362)
                      +++++++.|+|. ++||||||.++|||+.|.....   +.....++|.++|||++|+|+++|+++++|++||+|+...  
T Consensus        23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--  100 (345)
T cd08293          23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN--  100 (345)
T ss_pred             eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC--
Confidence            889999999875 9999999999999999864332   1111235688999999999999999999999999997310  


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccc----hh
Q 018022          105 DCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR----AC  180 (362)
Q Consensus       105 ~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~----aa  180 (362)
                                                                       ++|+||++++.+.++++|++++..+    ++
T Consensus       101 -------------------------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a  131 (345)
T cd08293         101 -------------------------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLG  131 (345)
T ss_pred             -------------------------------------------------CCceeEEEecHHHeEEcCccccccchhHHhh
Confidence                                                             2799999999999999999864432    34


Q ss_pred             ccccchhhhHHHHHHhcCCCCC--CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcEEEcCCCC
Q 018022          181 LLSCGVSTGVGAAWRTANVEVG--STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNC  256 (362)
Q Consensus       181 ~~~~~~~ta~~~l~~~~~~~~g--~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~vv~~~~~  256 (362)
                      .+.+++.|||+++.+..++++|  ++|||+|+ |++|++++|+|+.+|+.+|+++++++++.+.+++ +|+++++++++ 
T Consensus       132 ~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~-  210 (345)
T cd08293         132 AVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT-  210 (345)
T ss_pred             hcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC-
Confidence            5666899999988778888877  99999998 9999999999999998679999999999999876 99999999887 


Q ss_pred             CCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCC-Ccc----ccC--HHHH-HhcCcEEEE
Q 018022          257 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG-SQL----SLS--SFEV-LHSGKILMG  328 (362)
Q Consensus       257 ~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~-~~~----~~~--~~~~-~~~~~~i~g  328 (362)
                        .++.+.+++++++++|++||++|+.. +..++++++++ |+++.+|..... .+.    .++  ...+ ..+++.+.+
T Consensus       211 --~~~~~~i~~~~~~gvd~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (345)
T cd08293         211 --DNVAERLRELCPEGVDVYFDNVGGEI-SDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRER  286 (345)
T ss_pred             --CCHHHHHHHHCCCCceEEEECCCcHH-HHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEE
Confidence              77888888887668999999999876 78999999997 999999853211 111    111  1122 234555444


Q ss_pred             eeccCCC--ccccHHHHHHHHHcCCcccceecc
Q 018022          329 SLFGGLK--AKSDIPILLKRYMDKWSYVPFSGT  359 (362)
Q Consensus       329 ~~~~~~~--~~~~l~~~l~~~~~g~l~~~~~~~  359 (362)
                      .....+.  ..+.++++++++++|+|++.+..+
T Consensus       287 ~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~  319 (345)
T cd08293         287 FLVLNYKDKFEEAIAQLSQWVKEGKLKVKETVY  319 (345)
T ss_pred             EEeeccHhHHHHHHHHHHHHHHCCCccceeEEe
Confidence            3222211  134577888999999999875544

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=4.6e-35  Score=278.38  Aligned_cols=286  Identities=17%  Similarity=0.146  Sum_probs=234.4

Q ss_pred             eEEEeccC---CCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCC
Q 018022           18 RAAIATAP---GEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGV   92 (362)
Q Consensus        18 ka~~~~~~---~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~   92 (362)
                      ||+++.++   +.+  +++.++|.|+|+++||+|||+++++|++|..++.+..+...+|.++|+|++|+|+++|+++++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (336)
T TIGR02817         1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF   80 (336)
T ss_pred             CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence            57788876   433  8888999999999999999999999999998887765555678899999999999999999999


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCC
Q 018022           93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP  172 (362)
Q Consensus        93 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~  172 (362)
                      ++||+|+....                           ...                   .|+|++|+.++.+.++++|+
T Consensus        81 ~~Gd~V~~~~~---------------------------~~~-------------------~g~~~~~~~v~~~~~~~ip~  114 (336)
T TIGR02817        81 KPGDEVWYAGD---------------------------IDR-------------------PGSNAEFHLVDERIVGHKPK  114 (336)
T ss_pred             CCCCEEEEcCC---------------------------CCC-------------------CCcccceEEEcHHHcccCCC
Confidence            99999974310                           011                   24899999999999999999


Q ss_pred             CCCccchhccccchhhhHHHHHHhcCCCC-----CCEEEEECC-ChHHHHHHHHHHHc-CCCEEEEEcCCchHHHHHHhc
Q 018022          173 TVPPNRACLLSCGVSTGVGAAWRTANVEV-----GSTVVIFGL-GSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRF  245 (362)
Q Consensus       173 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~-----g~~vlI~Ga-g~~G~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~  245 (362)
                      ++++++++.+++++.|||+++....++++     |++|||+|+ |.+|++++|+|+.+ |+ +|+++++++++.+.++++
T Consensus       115 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~  193 (336)
T TIGR02817       115 SLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLEL  193 (336)
T ss_pred             CCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHc
Confidence            99999999999999999999878888877     999999987 99999999999998 99 899999999999999999


Q ss_pred             CCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcE
Q 018022          246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKI  325 (362)
Q Consensus       246 g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~  325 (362)
                      |+++++++..    ++.+.+.+..++++|+++|++++...+...+++++++ |+++.++..     ..+++..+..+++.
T Consensus       194 g~~~~~~~~~----~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~-----~~~~~~~~~~~~~~  263 (336)
T TIGR02817       194 GAHHVIDHSK----PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDP-----AELDISPFKRKSIS  263 (336)
T ss_pred             CCCEEEECCC----CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEccc-----ccccchhhhhcceE
Confidence            9999998643    5777777754348999999987766689999999997 999988532     23444455556677


Q ss_pred             EEEeeccC--CCc-------cccHHHHHHHHHcCCcccceeccc
Q 018022          326 LMGSLFGG--LKA-------KSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       326 i~g~~~~~--~~~-------~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      +.+..+..  ...       .+.+++++++++++.+++.+.+++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~  307 (336)
T TIGR02817       264 LHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETF  307 (336)
T ss_pred             EEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhcc
Confidence            77654331  111       145788999999999987665544

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=9.2e-35  Score=276.98  Aligned_cols=289  Identities=21%  Similarity=0.266  Sum_probs=242.4

Q ss_pred             eeEEEeccCCCc---eEEEEeecCCCCC-CeEEEEEeeeecchhhhhhhhcCCCCC-C----CCccccccceEEEEEeCC
Q 018022           17 CRAAIATAPGEP---LVIDEVIVDPPNS-HEVRVRIICTSLCHSDVTFWKMKDFPA-V----FPRILGHEAIGVVESVGE   87 (362)
Q Consensus        17 ~ka~~~~~~~~~---l~l~~~~~p~~~~-~eVlVkv~~~~i~~~d~~~~~g~~~~~-~----~p~~~G~e~~G~Vv~vG~   87 (362)
                      |||+++.+++.+   +.++++|.|.|.+ +||+||+.++++|++|...+.|..+.. .    .|.++|||++|+|+++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~   80 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS   80 (341)
T ss_pred             CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence            899999999875   8999999999888 999999999999999999888865431 2    678999999999999999


Q ss_pred             CCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCce
Q 018022           88 NVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV  167 (362)
Q Consensus        88 ~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~  167 (362)
                      ++..|++||+|+....                             .                   .|+|++|+.++...+
T Consensus        81 ~v~~~~~Gd~V~~~~~-----------------------------~-------------------~g~~~~~~~v~~~~~  112 (341)
T cd08290          81 GVKSLKPGDWVIPLRP-----------------------------G-------------------LGTWRTHAVVPADDL  112 (341)
T ss_pred             CCCCCCCCCEEEecCC-----------------------------C-------------------CccchheEeccHHHe
Confidence            9999999999985321                             0                   148999999999999


Q ss_pred             EEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc----hHHHHH
Q 018022          168 VKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS----EKFEIG  242 (362)
Q Consensus       168 ~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~----~~~~~~  242 (362)
                      +++|+++++++++.+++.+.+||+++.....++++++|||+|+ |++|++++++|+..|+ +++++.+++    ++.+.+
T Consensus       113 ~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~  191 (341)
T cd08290         113 IKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERL  191 (341)
T ss_pred             EeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHH
Confidence            9999999999999999999999998877788999999999987 9999999999999999 777777665    678888


Q ss_pred             HhcCCcEEEcCCCCCCc---cHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHH
Q 018022          243 KRFGVTEFVNSKNCGDK---SVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEV  319 (362)
Q Consensus       243 ~~~g~~~vv~~~~~~~~---~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~  319 (362)
                      +++|++++++++.   .   ++.+.+..+.++++|.+|||+|+.. +...+++++++ |+++.+|.... ....+++..+
T Consensus       192 ~~~g~~~~~~~~~---~~~~~~~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~  265 (341)
T cd08290         192 KALGADHVLTEEE---LRSLLATELLKSAPGGRPKLALNCVGGKS-ATELARLLSPG-GTMVTYGGMSG-QPVTVPTSLL  265 (341)
T ss_pred             HhcCCCEEEeCcc---cccccHHHHHHHHcCCCceEEEECcCcHh-HHHHHHHhCCC-CEEEEEeccCC-CCcccCHHHH
Confidence            8999999998765   4   6777777766557999999999876 77889999997 99999986432 2445676667


Q ss_pred             HhcCcEEEEeeccCCC---c----cccHHHHHHHHHcCCcccceeccc
Q 018022          320 LHSGKILMGSLFGGLK---A----KSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       320 ~~~~~~i~g~~~~~~~---~----~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      +.++.++.+..+..+.   .    .+.+++++++++++++++....++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  313 (341)
T cd08290         266 IFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPVEKV  313 (341)
T ss_pred             hhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCccccc
Confidence            7889999998765432   1    135888999999999987655443

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=8.4e-34  Score=268.96  Aligned_cols=305  Identities=23%  Similarity=0.297  Sum_probs=252.3

Q ss_pred             eeEEEeccCC--CceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 018022           17 CRAAIATAPG--EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV   93 (362)
Q Consensus        17 ~ka~~~~~~~--~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~   93 (362)
                      |||+++...+  +.+++++.+.|.++++|++||+.++++|++|+....|..+. ...|.++|||++|+|+++|+.+++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (336)
T cd08276           1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK   80 (336)
T ss_pred             CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence            7899999664  33888888888899999999999999999999988776543 34688999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      +||+|++.....|+.|      .++.|....   +.|...+                   |+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~------~~~~~~~~~---~~~~~~~-------------------g~~~~~~~~~~~~~~~lp~~  132 (336)
T cd08276          81 VGDRVVPTFFPNWLDG------PPTAEDEAS---ALGGPID-------------------GVLAEYVVLPEEGLVRAPDH  132 (336)
T ss_pred             CCCEEEEecccccccc------ccccccccc---ccccccC-------------------ceeeeEEEecHHHeEECCCC
Confidence            9999998876665443      334443221   1232223                   48999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  253 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~  253 (362)
                      +++.+++.+.+.+.+||+++.....+++|++|+|+|+|++|++++++|+.+|+ +|+++++++++.+.++++|.+.+++.
T Consensus       133 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~  211 (336)
T cd08276         133 LSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINY  211 (336)
T ss_pred             CCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcC
Confidence            99999999999999999988777899999999999889999999999999999 89999999999999999999998886


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeecc
Q 018022          254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG  332 (362)
Q Consensus       254 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~  332 (362)
                      +.  +.++.+.+.+.+++ ++|.+||+++... +..++++++++ |+++.+|..... ....+...++.+++++.++..+
T Consensus       212 ~~--~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~  286 (336)
T cd08276         212 RT--TPDWGEEVLKLTGGRGVDHVVEVGGPGT-LAQSIKAVAPG-GVISLIGFLSGF-EAPVLLLPLLTKGATLRGIAVG  286 (336)
T ss_pred             Cc--ccCHHHHHHHHcCCCCCcEEEECCChHH-HHHHHHhhcCC-CEEEEEccCCCC-ccCcCHHHHhhcceEEEEEecC
Confidence            54  24677888888876 9999999998654 88999999997 999999975332 2345666778899999998765


Q ss_pred             CCCccccHHHHHHHHHcCCcccceec
Q 018022          333 GLKAKSDIPILLKRYMDKWSYVPFSG  358 (362)
Q Consensus       333 ~~~~~~~l~~~l~~~~~g~l~~~~~~  358 (362)
                      .   .+.+++++++++++.+.+.+..
T Consensus       287 ~---~~~~~~~~~l~~~~~l~~~~~~  309 (336)
T cd08276         287 S---RAQFEAMNRAIEAHRIRPVIDR  309 (336)
T ss_pred             c---HHHHHHHHHHHHcCCcccccCc
Confidence            4   4789999999999888765433

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=9.4e-34  Score=267.61  Aligned_cols=289  Identities=20%  Similarity=0.217  Sum_probs=241.9

Q ss_pred             eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC---CCCCccccccceEEEEEeCCCCCC
Q 018022           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVDG   91 (362)
Q Consensus        17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~---~~~p~~~G~e~~G~Vv~vG~~v~~   91 (362)
                      |||+++++++.+  +.+.+.+.|.+.++||+||+.++++|++|+..+.|..+.   ..+|.++|+|++|+|+++|++++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~   80 (324)
T cd08244           1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP   80 (324)
T ss_pred             CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence            689999876643  667777777789999999999999999999888776432   356789999999999999999999


Q ss_pred             CCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 018022           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (362)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P  171 (362)
                      +++||+|+....                            ..+                   |+|++|+.++.++++++|
T Consensus        81 ~~~Gd~V~~~~~----------------------------~~~-------------------g~~~~~~~v~~~~~~~lp  113 (324)
T cd08244          81 AWLGRRVVAHTG----------------------------RAG-------------------GGYAELAVADVDSLHPVP  113 (324)
T ss_pred             CCCCCEEEEccC----------------------------CCC-------------------ceeeEEEEEchHHeEeCC
Confidence            999999985421                            012                   389999999999999999


Q ss_pred             CCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE
Q 018022          172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF  250 (362)
Q Consensus       172 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v  250 (362)
                      +++++++++.+++.+.+|| ++....+++++++|+|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|++.+
T Consensus       114 ~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~  191 (324)
T cd08244         114 DGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVA  191 (324)
T ss_pred             CCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence            9999999999998999995 4678889999999999996 9999999999999999 89999999999999999999888


Q ss_pred             EcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 018022          251 VNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS  329 (362)
Q Consensus       251 v~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  329 (362)
                      ++..+   .++.+.+.+++++ ++|+++|++|+.. ...++++++++ |+++.+|.... ....+++..++.+++++.++
T Consensus       192 ~~~~~---~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~  265 (324)
T cd08244         192 VDYTR---PDWPDQVREALGGGGVTVVLDGVGGAI-GRAALALLAPG-GRFLTYGWASG-EWTALDEDDARRRGVTVVGL  265 (324)
T ss_pred             EecCC---ccHHHHHHHHcCCCCceEEEECCChHh-HHHHHHHhccC-cEEEEEecCCC-CCCccCHHHHhhCCcEEEEe
Confidence            88876   6788888888777 8999999999876 68899999997 99999997533 22366666677889999988


Q ss_pred             eccCCCc---cccHHHHHHHHHcCCcccceeccc
Q 018022          330 LFGGLKA---KSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       330 ~~~~~~~---~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      .......   .+.+++++++++++++.+.+..+|
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~  299 (324)
T cd08244         266 LGVQAERGGLRALEARALAEAAAGRLVPVVGQTF  299 (324)
T ss_pred             ecccCCHHHHHHHHHHHHHHHHCCCccCccceEE
Confidence            7644321   356888899999999876554443

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-34  Score=268.97  Aligned_cols=288  Identities=22%  Similarity=0.247  Sum_probs=239.9

Q ss_pred             eeeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCC
Q 018022           16 QCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGV   92 (362)
Q Consensus        16 ~~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~   92 (362)
                      +|||+++..+++.  +++++.+.|.+.++||+|||.++++|+.|...+.+..+. ...|.++|+|++|+|+++|++++++
T Consensus         1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~   80 (334)
T PTZ00354          1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF   80 (334)
T ss_pred             CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence            5999999988753  777788888899999999999999999999888776532 3456789999999999999999999


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCC
Q 018022           93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP  172 (362)
Q Consensus        93 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~  172 (362)
                      ++||+|+...                                                 ..|+|++|++++.++++++|+
T Consensus        81 ~~Gd~V~~~~-------------------------------------------------~~g~~~~~~~v~~~~~~~ip~  111 (334)
T PTZ00354         81 KEGDRVMALL-------------------------------------------------PGGGYAEYAVAHKGHVMHIPQ  111 (334)
T ss_pred             CCCCEEEEec-------------------------------------------------CCCceeeEEEecHHHcEeCCC
Confidence            9999997431                                                 113899999999999999999


Q ss_pred             CCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE
Q 018022          173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV  251 (362)
Q Consensus       173 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv  251 (362)
                      +++..+++.+.+++.+||+++.....++++++|+|+|+ |.+|++++++|+.+|+ +++++.+++++.+.++++|+++++
T Consensus       112 ~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~  190 (334)
T PTZ00354        112 GYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILI  190 (334)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEE
Confidence            99999999998899999998877789999999999997 9999999999999999 767788889999999999999898


Q ss_pred             cCCCCCCcc-HHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccc-cCHHHHHhcCcEEEE
Q 018022          252 NSKNCGDKS-VSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLS-LSSFEVLHSGKILMG  328 (362)
Q Consensus       252 ~~~~~~~~~-~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~-~~~~~~~~~~~~i~g  328 (362)
                      ++..   .+ +.+.+.+.+++ ++|++||++|+.. +..++++++++ |+++.+|...+ ..+. +++..++.+++++.+
T Consensus       191 ~~~~---~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-g~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~  264 (334)
T PTZ00354        191 RYPD---EEGFAPKVKKLTGEKGVNLVLDCVGGSY-LSETAEVLAVD-GKWIVYGFMGG-AKVEKFNLLPLLRKRASIIF  264 (334)
T ss_pred             ecCC---hhHHHHHHHHHhCCCCceEEEECCchHH-HHHHHHHhccC-CeEEEEecCCC-CcccccCHHHHHhhCCEEEe
Confidence            8765   44 77888888776 9999999998754 88999999997 99999986433 2333 777777778889998


Q ss_pred             eeccCCCc-------cccHHHHHHHHHcCCcccceecc
Q 018022          329 SLFGGLKA-------KSDIPILLKRYMDKWSYVPFSGT  359 (362)
Q Consensus       329 ~~~~~~~~-------~~~l~~~l~~~~~g~l~~~~~~~  359 (362)
                      +.......       .+.+++++++++++.+++.+..+
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  302 (334)
T PTZ00354        265 STLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRT  302 (334)
T ss_pred             eeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccE
Confidence            86554221       12357788999999988654443

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=7.4e-34  Score=269.23  Aligned_cols=285  Identities=19%  Similarity=0.222  Sum_probs=233.0

Q ss_pred             eeeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCC
Q 018022           16 QCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVV   93 (362)
Q Consensus        16 ~~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~   93 (362)
                      +||++++.+++.+  +++++++.|.|.++||+||+.++++|++|+....+..+...+|.++|+|++|+|+++|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~   80 (327)
T PRK10754          1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK   80 (327)
T ss_pred             CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence            4999999988764  88999999999999999999999999999998887765555688999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      +||+|+...                             ..                   .|+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~-----------------------------~~-------------------~g~~~~~v~v~~~~~~~lp~~  112 (327)
T PRK10754         81 VGDRVVYAQ-----------------------------SA-------------------LGAYSSVHNVPADKAAILPDA  112 (327)
T ss_pred             CCCEEEECC-----------------------------CC-------------------CcceeeEEEcCHHHceeCCCC
Confidence            999997321                             01                   138999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN  252 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~  252 (362)
                      +++++++.+.+.+.+||.++.....+++|++|+|+|+ |.+|++++++|+.+|+ +++++++++++.+.++++|++++++
T Consensus       113 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~  191 (327)
T PRK10754        113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVIN  191 (327)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEc
Confidence            9999999888889999998877788999999999976 9999999999999999 8999999999999999999999998


Q ss_pred             CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEE-E-Ee
Q 018022          253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKIL-M-GS  329 (362)
Q Consensus       253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i-~-g~  329 (362)
                      .++   .++.+.+++++++ ++|++|||+|+.. +...+++++++ |+++.+|.... ....+++..+..++..+ . ..
T Consensus       192 ~~~---~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~  265 (327)
T PRK10754        192 YRE---ENIVERVKEITGGKKVRVVYDSVGKDT-WEASLDCLQRR-GLMVSFGNASG-PVTGVNLGILNQKGSLYVTRPS  265 (327)
T ss_pred             CCC---CcHHHHHHHHcCCCCeEEEEECCcHHH-HHHHHHHhccC-CEEEEEccCCC-CCCCcCHHHHhccCceEEecce
Confidence            876   7788889988887 9999999999854 88899999997 99999997532 22234444443333221 1 11


Q ss_pred             eccCCCcc----ccHHHHHHHHHcCCcccc
Q 018022          330 LFGGLKAK----SDIPILLKRYMDKWSYVP  355 (362)
Q Consensus       330 ~~~~~~~~----~~l~~~l~~~~~g~l~~~  355 (362)
                      ....+..+    +.++++++++++|+|++.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~  295 (327)
T PRK10754        266 LQGYITTREELTEASNELFSLIASGVIKVD  295 (327)
T ss_pred             eecccCCHHHHHHHHHHHHHHHHCCCeeee
Confidence            11111112    235668999999999864

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.4e-33  Score=257.26  Aligned_cols=269  Identities=31%  Similarity=0.459  Sum_probs=228.1

Q ss_pred             eEEEEEeeeecchhhhhhhhcCCC-CCCCCccccccceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCC
Q 018022           43 EVRVRIICTSLCHSDVTFWKMKDF-PAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCS  121 (362)
Q Consensus        43 eVlVkv~~~~i~~~d~~~~~g~~~-~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~  121 (362)
                      ||+|||.++++|++|...+.+..+ ...+|.++|+|++|+|+++|++++.|++||+|+..+...|+.|..|..    .|+
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~   76 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP   76 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence            689999999999999999988765 345688999999999999999999999999999999999999999997    676


Q ss_pred             CCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHhcCCCC
Q 018022          122 AFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV  201 (362)
Q Consensus       122 ~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~  201 (362)
                      ....   .+....|                   +|++|+.++.+.++++|+++++++++.+++.+.+||+++.....+.+
T Consensus        77 ~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~  134 (271)
T cd05188          77 GGGI---LGEGLDG-------------------GFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKP  134 (271)
T ss_pred             CCCE---eccccCC-------------------cceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCC
Confidence            6654   3333344                   99999999999999999999999999998899999998877777799


Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcC
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECV  280 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~  280 (362)
                      +++|||+|+|.+|++++++++..|. +|+++++++++.+.++++|.+++++..+   .++.+.+. ...+ ++|++|+++
T Consensus       135 ~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~-~~~~~~~d~vi~~~  209 (271)
T cd05188         135 GDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE---EDLEEELR-LTGGGGADVVIDAV  209 (271)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc---CCHHHHHH-HhcCCCCCEEEECC
Confidence            9999999985599999999999998 9999999999999999999988888776   56666666 4444 899999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHH
Q 018022          281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRY  347 (362)
Q Consensus       281 g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~  347 (362)
                      +....++.++++++++ |+++.+|....... ......++.+++++.++..+.   .++++++++++
T Consensus       210 ~~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  271 (271)
T cd05188         210 GGPETLAQALRLLRPG-GRIVVVGGTSGGPP-LDDLRRLLFKELTIIGSTGGT---REDFEEALDLL  271 (271)
T ss_pred             CCHHHHHHHHHhcccC-CEEEEEccCCCCCC-cccHHHHHhcceEEEEeecCC---HHHHHHHHhhC
Confidence            9855588999999997 99999997543322 223456778899999997665   36778777753

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=6.1e-33  Score=262.16  Aligned_cols=289  Identities=17%  Similarity=0.154  Sum_probs=226.0

Q ss_pred             eeEEEeccCCC--ceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 018022           17 CRAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV   93 (362)
Q Consensus        17 ~ka~~~~~~~~--~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~   93 (362)
                      |||+++.++++  +++++++|.|.++++||+||+.++++|++|+..+.|..+. ..+|.++|||++|+|+++  +++.|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~   78 (325)
T cd05280           1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR   78 (325)
T ss_pred             CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence            79999999985  5999999999999999999999999999999998887543 346889999999999999  456899


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      +||+|+..+.                        ..|+..+|                   +|++|+.++.++++++|++
T Consensus        79 ~Gd~V~~~~~------------------------~~g~~~~g-------------------~~~~~~~v~~~~~~~lp~~  115 (325)
T cd05280          79 EGDEVLVTGY------------------------DLGMNTDG-------------------GFAEYVRVPADWVVPLPEG  115 (325)
T ss_pred             CCCEEEEccc------------------------ccCCCCCc-------------------eeEEEEEEchhhEEECCCC
Confidence            9999986421                        02222233                   9999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHHHhc--CCC-CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTA--NVE-VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE  249 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~--~~~-~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~  249 (362)
                      +++++++.+++.+.+||.++....  ++. .+++|+|+|+ |.+|++++++|+.+|+ +|+++++++++++.++++|+++
T Consensus       116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~  194 (325)
T cd05280         116 LSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASE  194 (325)
T ss_pred             CCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcE
Confidence            999999999999999999875443  335 3579999998 9999999999999999 7999999999999999999999


Q ss_pred             EEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 018022          250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS  329 (362)
Q Consensus       250 vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  329 (362)
                      ++++++   . ..+..+....+++|++||++|+.. +..++++++++ |+++.+|..... +..+++..++.+++++.+.
T Consensus       195 ~~~~~~---~-~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~  267 (325)
T cd05280         195 VLDRED---L-LDESKKPLLKARWAGAIDTVGGDV-LANLLKQTKYG-GVVASCGNAAGP-ELTTTVLPFILRGVSLLGI  267 (325)
T ss_pred             EEcchh---H-HHHHHHHhcCCCccEEEECCchHH-HHHHHHhhcCC-CEEEEEecCCCC-ccccccchheeeeeEEEEE
Confidence            988654   2 122223333338999999999864 89999999997 999999975322 2355555566789999987


Q ss_pred             eccCCCc---cccHHHHHHHHHcCCcccceecc
Q 018022          330 LFGGLKA---KSDIPILLKRYMDKWSYVPFSGT  359 (362)
Q Consensus       330 ~~~~~~~---~~~l~~~l~~~~~g~l~~~~~~~  359 (362)
                      .......   .+.++.+.+++..+.+. .+..+
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  299 (325)
T cd05280         268 DSVNCPMELRKQVWQKLATEWKPDLLE-IVVRE  299 (325)
T ss_pred             EeecCchhHHHHHHHHHHHHHhcCCcc-ceeeE
Confidence            6544311   13345555556666333 34433

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=7.3e-33  Score=261.45  Aligned_cols=276  Identities=21%  Similarity=0.267  Sum_probs=236.1

Q ss_pred             eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCCCCCEEEeeCCCCCC
Q 018022           29 LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCT  107 (362)
Q Consensus        29 l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~  107 (362)
                      +++++.+.|.+.++||+|||.++++|+.|...+.+.... ..+|.++|+|++|+|+++|++++++++||+|+..+.    
T Consensus        14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----   89 (323)
T cd05282          14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG----   89 (323)
T ss_pred             EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence            667788888899999999999999999999888776543 356789999999999999999999999999985421    


Q ss_pred             CCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccchhccccchh
Q 018022          108 ECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS  187 (362)
Q Consensus       108 ~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~  187 (362)
                                                                   .|+|++|+.++.+.++++|++++..+++.+++.+.
T Consensus        90 ---------------------------------------------~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~  124 (323)
T cd05282          90 ---------------------------------------------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPL  124 (323)
T ss_pred             ---------------------------------------------CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHH
Confidence                                                         13899999999999999999999999999888999


Q ss_pred             hhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHH
Q 018022          188 TGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIII  266 (362)
Q Consensus       188 ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~  266 (362)
                      +||+++.....+.++++|+|+|+ |.+|++++++|+.+|+ .++++.+++++.+.++++|+++++++++   .++.+.+.
T Consensus       125 ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~  200 (323)
T cd05282         125 TAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP---EDLAQRVK  200 (323)
T ss_pred             HHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc---hhHHHHHH
Confidence            99998878888899999999988 9999999999999999 8889988999999999999999999876   67888888


Q ss_pred             hhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCCc-------cc
Q 018022          267 DMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA-------KS  338 (362)
Q Consensus       267 ~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~-------~~  338 (362)
                      +.+++ ++|++|||+|+.. ....+++++++ |+++.+|..... ...+++..+..+++++.+..+..+..       .+
T Consensus       201 ~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (323)
T cd05282         201 EATGGAGARLALDAVGGES-ATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQE  277 (323)
T ss_pred             HHhcCCCceEEEECCCCHH-HHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHH
Confidence            88877 9999999999876 67889999997 999999875433 45667666666899999988765431       24


Q ss_pred             cHHHHHHHHHcCCcccceeccc
Q 018022          339 DIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       339 ~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      .+++++++++++++.+.+..+|
T Consensus       278 ~~~~~~~~l~~~~l~~~~~~~~  299 (323)
T cd05282         278 TFAEVIKLVEAGVLTTPVGAKF  299 (323)
T ss_pred             HHHHHHHHHhCCCcccCcccee
Confidence            5888999999999987654443

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9.3e-33  Score=259.46  Aligned_cols=273  Identities=23%  Similarity=0.333  Sum_probs=228.1

Q ss_pred             ccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhh-hcCCCC--CCCCccccccceEEEEEeCCCCCCCCCCCEEE
Q 018022           23 TAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFW-KMKDFP--AVFPRILGHEAIGVVESVGENVDGVVEGDVVI   99 (362)
Q Consensus        23 ~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~-~g~~~~--~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~   99 (362)
                      ++++. +++++++.|++.++||+||+.++++|++|...+ .+....  +.+|.++|+|++|+|+++|++++++++||+|+
T Consensus         2 ~~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~   80 (312)
T cd08269           2 TGPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVA   80 (312)
T ss_pred             CCCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEE
Confidence            34555 999999999999999999999999999999887 665422  23478999999999999999999999999998


Q ss_pred             eeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccch
Q 018022          100 PHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRA  179 (362)
Q Consensus       100 ~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~a  179 (362)
                      ..+                                                  .|+|++|+.++.+.++++|+++  ..+
T Consensus        81 ~~~--------------------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~  108 (312)
T cd08269          81 GLS--------------------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQ  108 (312)
T ss_pred             Eec--------------------------------------------------CCcceeeEEEchhheEECCCch--hhh
Confidence            542                                                  2489999999999999999998  233


Q ss_pred             hccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCc
Q 018022          180 CLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDK  259 (362)
Q Consensus       180 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  259 (362)
                      +....+++++|+++. ..+++++++|+|+|+|.+|.+++++|+.+|++.++++++.+++.++++++|++++++.+.   .
T Consensus       109 ~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~  184 (312)
T cd08269         109 AFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS---E  184 (312)
T ss_pred             HHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC---c
Confidence            333257788888764 888999999999988999999999999999944999999999999999999999988766   6


Q ss_pred             cHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCC-Ccc
Q 018022          260 SVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL-KAK  337 (362)
Q Consensus       260 ~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~-~~~  337 (362)
                      ++.+.+.+++++ ++|++|||+|....+...+++++++ |+++.+|... ....++++..+..+++.+.++..... ...
T Consensus       185 ~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (312)
T cd08269         185 AIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ-DGPRPVPFQTWNWKGIDLINAVERDPRIGL  262 (312)
T ss_pred             CHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC-CCCcccCHHHHhhcCCEEEEecccCccchh
Confidence            788888888877 9999999999887789999999997 9999999753 33456666677788999887754332 124


Q ss_pred             ccHHHHHHHHHcCCccc
Q 018022          338 SDIPILLKRYMDKWSYV  354 (362)
Q Consensus       338 ~~l~~~l~~~~~g~l~~  354 (362)
                      +.+++++++++++++++
T Consensus       263 ~~~~~~~~~~~~~~l~~  279 (312)
T cd08269         263 EGMREAVKLIADGRLDL  279 (312)
T ss_pred             hHHHHHHHHHHcCCCCc
Confidence            68999999999999986

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=1.2e-32  Score=260.91  Aligned_cols=282  Identities=23%  Similarity=0.257  Sum_probs=234.8

Q ss_pred             eeeEEEeccCCC----ceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCC
Q 018022           16 QCRAAIATAPGE----PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVD   90 (362)
Q Consensus        16 ~~ka~~~~~~~~----~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~   90 (362)
                      +|||+++.+++.    ++++++++.|.+.++||+|||.++++|++|+..+.|..+. ..+|.++|+|++|+|+++|++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~   80 (329)
T cd08250           1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT   80 (329)
T ss_pred             CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence            499999998776    3899999999999999999999999999999988876543 46788999999999999999999


Q ss_pred             CCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEc
Q 018022           91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV  170 (362)
Q Consensus        91 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~  170 (362)
                      ++++||+|+...                                                  .|+|++|+.++.+.++++
T Consensus        81 ~~~~Gd~V~~~~--------------------------------------------------~g~~~s~~~v~~~~~~~i  110 (329)
T cd08250          81 DFKVGDAVATMS--------------------------------------------------FGAFAEYQVVPARHAVPV  110 (329)
T ss_pred             CCCCCCEEEEec--------------------------------------------------CcceeEEEEechHHeEEC
Confidence            999999997431                                                  248999999999999999


Q ss_pred             CCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE
Q 018022          171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE  249 (362)
Q Consensus       171 P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~  249 (362)
                      |++  ..+++.+.+++.+||+++.+..++.++++|+|+|+ |.+|++++++|+..|+ +|+++++++++.+.++++|++.
T Consensus       111 p~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~  187 (329)
T cd08250         111 PEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDR  187 (329)
T ss_pred             CCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCce
Confidence            997  34667788899999999877789999999999997 9999999999999999 8999999999999999999988


Q ss_pred             EEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCC---------CccccCHHHHH
Q 018022          250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG---------SQLSLSSFEVL  320 (362)
Q Consensus       250 vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~---------~~~~~~~~~~~  320 (362)
                      +++.++   .++.+.+....++++|++||++|+. .+..++++++++ |+++.+|.....         ....++ ...+
T Consensus       188 v~~~~~---~~~~~~~~~~~~~~vd~v~~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~  261 (329)
T cd08250         188 PINYKT---EDLGEVLKKEYPKGVDVVYESVGGE-MFDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLP-PKLL  261 (329)
T ss_pred             EEeCCC---ccHHHHHHHhcCCCCeEEEECCcHH-HHHHHHHHhccC-CeEEEEecccCCcccCccccccccccc-HHHh
Confidence            888766   5677777666545899999999974 488999999997 999999875321         111223 2446


Q ss_pred             hcCcEEEEeeccCCC--ccccHHHHHHHHHcCCcccce
Q 018022          321 HSGKILMGSLFGGLK--AKSDIPILLKRYMDKWSYVPF  356 (362)
Q Consensus       321 ~~~~~i~g~~~~~~~--~~~~l~~~l~~~~~g~l~~~~  356 (362)
                      .+++++.++.+....  ..+.+.+++++++++.+++.+
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  299 (329)
T cd08250         262 AKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEV  299 (329)
T ss_pred             hcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeE
Confidence            678999988654321  245688899999999988743

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=4.8e-33  Score=265.39  Aligned_cols=287  Identities=23%  Similarity=0.254  Sum_probs=229.1

Q ss_pred             eeEEEeccCC-CceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022           17 CRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (362)
Q Consensus        17 ~ka~~~~~~~-~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G   95 (362)
                      |||+++++++ ..+++++++.|+|+++||+||+.++++|++|+..+.+.. ....|.++|+|++|+|+.+|++++.|++|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~G   79 (339)
T cd08249           1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVG   79 (339)
T ss_pred             CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCC
Confidence            7899999994 239999999999999999999999999999988775543 22357889999999999999999999999


Q ss_pred             CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (362)
Q Consensus        96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~  175 (362)
                      |+|+......|+                      +                   ....|+|++|+.++.+.++++|++++
T Consensus        80 d~V~~~~~~~~~----------------------~-------------------~~~~g~~~~~~~v~~~~~~~ip~~~~  118 (339)
T cd08249          80 DRVAGFVHGGNP----------------------N-------------------DPRNGAFQEYVVADADLTAKIPDNIS  118 (339)
T ss_pred             CEEEEEeccccC----------------------C-------------------CCCCCcccceEEechhheEECCCCCC
Confidence            999876543221                      0                   11124999999999999999999999


Q ss_pred             ccchhccccchhhhHHHHHHhcCC----------CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh
Q 018022          176 PNRACLLSCGVSTGVGAAWRTANV----------EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR  244 (362)
Q Consensus       176 ~~~aa~~~~~~~ta~~~l~~~~~~----------~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~  244 (362)
                      +++++.+++.+.+||+++.+..++          .++++|+|+|+ |.+|++++++|+.+|+ +|+++. ++++.+.+++
T Consensus       119 ~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~  196 (339)
T cd08249         119 FEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKS  196 (339)
T ss_pred             HHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHh
Confidence            999999999999999987666544          78999999998 9999999999999999 788877 5689999999


Q ss_pred             cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhcc--CCceEEEEccCCCCCccccCHHHHHhc
Q 018022          245 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRK--GWGKTIVLGVDQPGSQLSLSSFEVLHS  322 (362)
Q Consensus       245 ~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~--~~G~iv~~G~~~~~~~~~~~~~~~~~~  322 (362)
                      +|+++++++++   .++.+.+++++++++|++||++|++..+..+++++++  + |+++.+|......  .+      ..
T Consensus       197 ~g~~~v~~~~~---~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~--~~------~~  264 (339)
T cd08249         197 LGADAVFDYHD---PDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEET--EP------RK  264 (339)
T ss_pred             cCCCEEEECCC---chHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccc--cC------CC
Confidence            99999999876   6788888887766899999999985669999999999  8 9999998753211  11      11


Q ss_pred             CcEEEEeeccCC---------CccccHHHHHHHHHcCCcccceecc
Q 018022          323 GKILMGSLFGGL---------KAKSDIPILLKRYMDKWSYVPFSGT  359 (362)
Q Consensus       323 ~~~i~g~~~~~~---------~~~~~l~~~l~~~~~g~l~~~~~~~  359 (362)
                      +..+........         .....++.++++++++++.+....+
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  310 (339)
T cd08249         265 GVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRV  310 (339)
T ss_pred             CceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCcee
Confidence            223222221111         1124577889999999998764443

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=2.1e-32  Score=257.47  Aligned_cols=289  Identities=24%  Similarity=0.318  Sum_probs=233.6

Q ss_pred             eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 018022           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE   94 (362)
Q Consensus        17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~   94 (362)
                      ||++++...+..  +++.+.+.|.+.++||+||+.++++|++|+..+.+..+....|.++|+|++|+|+++|+  ..+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~   78 (320)
T cd08243           1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP   78 (320)
T ss_pred             CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence            689999877642  77778888888999999999999999999998888765456688999999999999995  57999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022           95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (362)
Q Consensus        95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l  174 (362)
                      ||+|+....                        +++...+                   |+|++|+.++...++++|+++
T Consensus        79 Gd~V~~~~~------------------------~~~~~~~-------------------g~~~~~~~~~~~~~~~ip~~~  115 (320)
T cd08243          79 GQRVATAMG------------------------GMGRTFD-------------------GSYAEYTLVPNEQVYAIDSDL  115 (320)
T ss_pred             CCEEEEecC------------------------CCCCCCC-------------------cccceEEEcCHHHcEeCCCCC
Confidence            999986521                        0111122                   399999999999999999999


Q ss_pred             CccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  253 (362)
Q Consensus       175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~  253 (362)
                      ++++++.+++++.+||+++....++++|++|+|+|+ |.+|++++++|+.+|+ +|+++.+++++.+.++++|++++++.
T Consensus       116 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  194 (320)
T cd08243         116 SWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID  194 (320)
T ss_pred             CHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec
Confidence            999999999999999999878788999999999998 9999999999999999 89999999999999999999888754


Q ss_pred             CCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCcc-ccCHHHHH--hcCcEEEEee
Q 018022          254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL-SLSSFEVL--HSGKILMGSL  330 (362)
Q Consensus       254 ~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~-~~~~~~~~--~~~~~i~g~~  330 (362)
                       .   .++.+.+.++ +.++|++||++|+. .+...+++++++ |+++.+|...+.... ......+.  .+++.+.++.
T Consensus       195 -~---~~~~~~i~~~-~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (320)
T cd08243         195 -D---GAIAEQLRAA-PGGFDKVLELVGTA-TLKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSS  267 (320)
T ss_pred             -C---ccHHHHHHHh-CCCceEEEECCChH-HHHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecc
Confidence             3   4677778777 44899999999985 488999999997 999999974322211 12222333  5678887775


Q ss_pred             ccCCCccccHHHHHHHHHcCCcccceecc
Q 018022          331 FGGLKAKSDIPILLKRYMDKWSYVPFSGT  359 (362)
Q Consensus       331 ~~~~~~~~~l~~~l~~~~~g~l~~~~~~~  359 (362)
                      ..... .+.+++++++++++.+++.+..+
T Consensus       268 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  295 (320)
T cd08243         268 SGDVP-QTPLQELFDFVAAGHLDIPPSKV  295 (320)
T ss_pred             hhhhh-HHHHHHHHHHHHCCceecccccE
Confidence            43321 35688899999999988754433

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=2.1e-32  Score=258.93  Aligned_cols=262  Identities=17%  Similarity=0.182  Sum_probs=213.2

Q ss_pred             eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCC-CCCCCCccccccceEEEEEeCCCCCCCC
Q 018022           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD-FPAVFPRILGHEAIGVVESVGENVDGVV   93 (362)
Q Consensus        17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~-~~~~~p~~~G~e~~G~Vv~vG~~v~~~~   93 (362)
                      |||+++.+++++  +.+++++.|.|.++||+||+.++++|++|.....+.. ....+|.++|||++|+|+++|  +++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~   78 (326)
T cd08289           1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK   78 (326)
T ss_pred             CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence            799999988764  8889999999999999999999999999987664322 123458899999999999964  56899


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      +||+|+..+..                        .|...+|                   +|++|+.++.++++++|++
T Consensus        79 ~Gd~V~~~~~~------------------------~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~  115 (326)
T cd08289          79 PGDEVIVTSYD------------------------LGVSHHG-------------------GYSEYARVPAEWVVPLPKG  115 (326)
T ss_pred             CCCEEEEcccc------------------------cCCCCCC-------------------cceeEEEEcHHHeEECCCC
Confidence            99999865320                        2222233                   9999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHHHh--cC-CCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRT--AN-VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE  249 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~--~~-~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~  249 (362)
                      +++++++.+++.+.|||.++...  .. ...+++|+|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|+++
T Consensus       116 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~  194 (326)
T cd08289         116 LTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKE  194 (326)
T ss_pred             CCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCE
Confidence            99999999998999998876432  23 345789999998 9999999999999999 8999999999999999999999


Q ss_pred             EEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 018022          250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS  329 (362)
Q Consensus       250 vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  329 (362)
                      +++.++   . ..+.+.++.++++|++||++|+. .+...+++++++ |+++.+|... ....++++..++.+++++.++
T Consensus       195 v~~~~~---~-~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~-G~~i~~g~~~-~~~~~~~~~~~~~~~~~~~~~  267 (326)
T cd08289         195 VIPREE---L-QEESIKPLEKQRWAGAVDPVGGK-TLAYLLSTLQYG-GSVAVSGLTG-GGEVETTVFPFILRGVNLLGI  267 (326)
T ss_pred             EEcchh---H-HHHHHHhhccCCcCEEEECCcHH-HHHHHHHHhhcC-CEEEEEeecC-CCCCCcchhhhhhccceEEEE
Confidence            988765   3 34556666434899999999985 488999999997 9999999753 233455566677889999997


Q ss_pred             ec
Q 018022          330 LF  331 (362)
Q Consensus       330 ~~  331 (362)
                      ..
T Consensus       268 ~~  269 (326)
T cd08289         268 DS  269 (326)
T ss_pred             Ee
Confidence            54

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=2.8e-32  Score=259.14  Aligned_cols=284  Identities=19%  Similarity=0.130  Sum_probs=234.4

Q ss_pred             eeEEEeccCCCc-----eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCC
Q 018022           17 CRAAIATAPGEP-----LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG   91 (362)
Q Consensus        17 ~ka~~~~~~~~~-----l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~   91 (362)
                      |||+++.++++.     +.+++++.|++.++||+||+.++++|++|+..+.+..+..+.|.++|||++|+|+++|++++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~   80 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL   80 (336)
T ss_pred             CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence            689999998863     566678888889999999999999999999888776554456789999999999999999999


Q ss_pred             CCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 018022           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (362)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P  171 (362)
                      |++||+|+....                           ...+                   |+|++|+.++.++++++|
T Consensus        81 ~~~Gd~V~~~~~---------------------------~~~~-------------------g~~~~~~~v~~~~~~~ip  114 (336)
T cd08252          81 FKVGDEVYYAGD---------------------------ITRP-------------------GSNAEYQLVDERIVGHKP  114 (336)
T ss_pred             CCCCCEEEEcCC---------------------------CCCC-------------------ccceEEEEEchHHeeeCC
Confidence            999999974311                           0012                   389999999999999999


Q ss_pred             CCCCccchhccccchhhhHHHHHHhcCCCC-----CCEEEEECC-ChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHh
Q 018022          172 PTVPPNRACLLSCGVSTGVGAAWRTANVEV-----GSTVVIFGL-GSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR  244 (362)
Q Consensus       172 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~-----g~~vlI~Ga-g~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~  244 (362)
                      ++++.++++.+++.+.+||+++.+...+.+     +++|+|+|+ |.+|++++++|+.+| . +|+++++++++.+.+++
T Consensus       115 ~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~  193 (336)
T cd08252         115 KSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKE  193 (336)
T ss_pred             CCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh
Confidence            999999999999999999998778788887     999999986 999999999999999 7 99999999999999999


Q ss_pred             cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCc
Q 018022          245 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGK  324 (362)
Q Consensus       245 ~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~  324 (362)
                      +|+++++++++    ++.+.+....++++|++||++|+...+..++++++++ |+++.+|...    ..+++..+..+++
T Consensus       194 ~g~~~~~~~~~----~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~----~~~~~~~~~~~~~  264 (336)
T cd08252         194 LGADHVINHHQ----DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ----EPLDLGPLKSKSA  264 (336)
T ss_pred             cCCcEEEeCCc----cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC----Ccccchhhhcccc
Confidence            99999888653    4556666443348999999999876689999999997 9999998642    3445555556788


Q ss_pred             EEEEeeccCCC--c-------cccHHHHHHHHHcCCcccce
Q 018022          325 ILMGSLFGGLK--A-------KSDIPILLKRYMDKWSYVPF  356 (362)
Q Consensus       325 ~i~g~~~~~~~--~-------~~~l~~~l~~~~~g~l~~~~  356 (362)
                      ++.++.+....  .       .+.++++++++++|.+++.+
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  305 (336)
T cd08252         265 SFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTL  305 (336)
T ss_pred             eEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecce
Confidence            88887654311  1       13478899999999998754

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=6.7e-32  Score=255.27  Aligned_cols=284  Identities=17%  Similarity=0.144  Sum_probs=225.1

Q ss_pred             eEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCCC
Q 018022           18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVE   94 (362)
Q Consensus        18 ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~~   94 (362)
                      ||+++...+.+  ++++++|.|.+.++||+||+.++++|++|+..+.|..+. ..+|.++|||++|+|++  +++.+|++
T Consensus         1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~   78 (323)
T TIGR02823         1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE   78 (323)
T ss_pred             CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence            68888887764  789999999999999999999999999999988886533 35688999999999998  55678999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022           95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (362)
Q Consensus        95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l  174 (362)
                      ||+|+..+..                        .|...+|                   +|++|+.++.+.++++|+++
T Consensus        79 Gd~V~~~~~~------------------------~~~~~~g-------------------~~~~~~~~~~~~~~~iP~~~  115 (323)
T TIGR02823        79 GDEVIVTGYG------------------------LGVSHDG-------------------GYSQYARVPADWLVPLPEGL  115 (323)
T ss_pred             CCEEEEccCC------------------------CCCCCCc-------------------cceEEEEEchhheEECCCCC
Confidence            9999865320                        1222233                   99999999999999999999


Q ss_pred             CccchhccccchhhhHHHHHHh--cCCCCCC-EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE
Q 018022          175 PPNRACLLSCGVSTGVGAAWRT--ANVEVGS-TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF  250 (362)
Q Consensus       175 ~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~-~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v  250 (362)
                      ++++++.+++.+.+||.++...  ..+.+++ +|+|+|+ |.+|++++++|+.+|+ +++++.+++++.+.++++|++++
T Consensus       116 ~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~  194 (323)
T TIGR02823       116 SLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEV  194 (323)
T ss_pred             CHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEE
Confidence            9999999998889998765333  3488898 9999998 9999999999999999 78888778888899999999988


Q ss_pred             EcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEee
Q 018022          251 VNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL  330 (362)
Q Consensus       251 v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~  330 (362)
                      ++.++   .+.  .++.+.++++|.++||+|+.. +...+++++++ |+++.+|... .....++...++.+++++.+..
T Consensus       195 ~~~~~---~~~--~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~  266 (323)
T TIGR02823       195 IDRED---LSP--PGKPLEKERWAGAVDTVGGHT-LANVLAQLKYG-GAVAACGLAG-GPDLPTTVLPFILRGVSLLGID  266 (323)
T ss_pred             Ecccc---HHH--HHHHhcCCCceEEEECccHHH-HHHHHHHhCCC-CEEEEEcccC-CCCccccHHHHhhcceEEEEEe
Confidence            88654   222  444554447999999999875 88999999997 9999999753 2334455566667899999976


Q ss_pred             ccCCCc---cccHHHHHHHHHcCCcccc
Q 018022          331 FGGLKA---KSDIPILLKRYMDKWSYVP  355 (362)
Q Consensus       331 ~~~~~~---~~~l~~~l~~~~~g~l~~~  355 (362)
                      +.....   .+.++.+.+++..+.+++.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (323)
T TIGR02823       267 SVYCPMALREAAWQRLATDLKPRNLESI  294 (323)
T ss_pred             ccccCchhHHHHHHHHHHHhhcCCCcCc
Confidence            542211   1235666677778877653

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.7e-32  Score=254.76  Aligned_cols=275  Identities=20%  Similarity=0.247  Sum_probs=225.7

Q ss_pred             eeEEEeccCCC-ceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022           17 CRAAIATAPGE-PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (362)
Q Consensus        17 ~ka~~~~~~~~-~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G   95 (362)
                      ||++++.+.+. .+++++.+.|.+.++||+||+.++++|++|.....+.    ..|.++|+|++|+|+++|+++..|++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~G   76 (305)
T cd08270           1 MRALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAVG   76 (305)
T ss_pred             CeEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCCC
Confidence            68999987552 1777799999999999999999999999999876522    236789999999999999999999999


Q ss_pred             CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (362)
Q Consensus        96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~  175 (362)
                      |+|+...                              .                   .|+|++|+.++.++++++|++++
T Consensus        77 d~V~~~~------------------------------~-------------------~g~~~~~~~v~~~~~~~ip~~~~  107 (305)
T cd08270          77 ARVVGLG------------------------------A-------------------MGAWAELVAVPTGWLAVLPDGVS  107 (305)
T ss_pred             CEEEEec------------------------------C-------------------CcceeeEEEEchHHeEECCCCCC
Confidence            9997431                              1                   14899999999999999999999


Q ss_pred             ccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  254 (362)
Q Consensus       176 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~  254 (362)
                      +++++.+++.+.+||+++...... ++++|+|+|+ |.+|++++++|+..|+ +++++++++++.+.++++|++.+++..
T Consensus       108 ~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~  185 (305)
T cd08270         108 FAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGG  185 (305)
T ss_pred             HHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecc
Confidence            999999999999999987555544 5999999998 9999999999999999 899999999999999999987665432


Q ss_pred             CCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHh--cCcEEEEeecc
Q 018022          255 NCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLH--SGKILMGSLFG  332 (362)
Q Consensus       255 ~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~--~~~~i~g~~~~  332 (362)
                      .    +       +.++++|+++|++|+.. +..++++++.+ |+++.+|... .....+++..+..  ++.++.++++.
T Consensus       186 ~----~-------~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (305)
T cd08270         186 S----E-------LSGAPVDLVVDSVGGPQ-LARALELLAPG-GTVVSVGSSS-GEPAVFNPAAFVGGGGGRRLYTFFLY  251 (305)
T ss_pred             c----c-------ccCCCceEEEECCCcHH-HHHHHHHhcCC-CEEEEEeccC-CCcccccHHHHhcccccceEEEEEcc
Confidence            2    1       12237999999999875 89999999997 9999999753 3345566666655  68999988765


Q ss_pred             C-CCccccHHHHHHHHHcCCcccceeccc
Q 018022          333 G-LKAKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       333 ~-~~~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      . ....+.++.++++++++++++.+..++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  280 (305)
T cd08270         252 DGEPLAADLARLLGLVAAGRLDPRIGWRG  280 (305)
T ss_pred             CHHHHHHHHHHHHHHHHCCCccceeccEE
Confidence            3 112467899999999999987655443

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=1.8e-31  Score=250.40  Aligned_cols=288  Identities=23%  Similarity=0.293  Sum_probs=240.3

Q ss_pred             eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 018022           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV   93 (362)
Q Consensus        17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~   93 (362)
                      |||+++.+++.+  +++.+++.|.+.++||+||+.++++|++|+..+.+..+. ...|.++|||++|+|+++|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (323)
T cd05276           1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK   80 (323)
T ss_pred             CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence            799999886543  778888888889999999999999999999888775533 34678999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      +||+|+....                                                 .|+|++|+.++.++++++|++
T Consensus        81 ~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~~p~~  111 (323)
T cd05276          81 VGDRVCALLA-------------------------------------------------GGGYAEYVVVPAGQLLPVPEG  111 (323)
T ss_pred             CCCEEEEecC-------------------------------------------------CCceeEEEEcCHHHhccCCCC
Confidence            9999974311                                                 138999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN  252 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~  252 (362)
                      +++.+++.+...+.++|+++.+...+.++++|+|+|+ |.+|++++++++..|+ .++++++++++.+.++++|.+.+++
T Consensus       112 ~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  190 (323)
T cd05276         112 LSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAIN  190 (323)
T ss_pred             CCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence            9999999998899999998877788999999999997 9999999999999999 7999999999999999999988888


Q ss_pred             CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022          253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF  331 (362)
Q Consensus       253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  331 (362)
                      ...   .++.+.+.+...+ ++|++||++|+.. +...+++++++ |+++.+|... .....+++..++.+++++.++..
T Consensus       191 ~~~---~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~~~~~-g~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  264 (323)
T cd05276         191 YRT---EDFAEEVKEATGGRGVDVILDMVGGDY-LARNLRALAPD-GRLVLIGLLG-GAKAELDLAPLLRKRLTLTGSTL  264 (323)
T ss_pred             CCc---hhHHHHHHHHhCCCCeEEEEECCchHH-HHHHHHhhccC-CEEEEEecCC-CCCCCCchHHHHHhCCeEEEeec
Confidence            776   6777788777766 8999999999877 88899999997 9999998743 22345666666678999999876


Q ss_pred             cCCCc-------cccHHHHHHHHHcCCcccceeccc
Q 018022          332 GGLKA-------KSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       332 ~~~~~-------~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      .....       .+.+++++++++++++.+....+|
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (323)
T cd05276         265 RSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVF  300 (323)
T ss_pred             cchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEE
Confidence            54311       123577888999999876554433

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=4.4e-31  Score=248.22  Aligned_cols=291  Identities=23%  Similarity=0.297  Sum_probs=240.3

Q ss_pred             eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 018022           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV   93 (362)
Q Consensus        17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~   93 (362)
                      ||++++..++.+  +++++++.|.+.+++|+|++.++++|++|+..+.|..+. ...|.++|||++|+|+++|+++++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~   80 (325)
T cd08253           1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK   80 (325)
T ss_pred             CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence            688888876543  888999999999999999999999999999888776543 45788999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      +||+|+..+..                        .+ ...                   |++++|+.++...++++|++
T Consensus        81 ~Gd~v~~~~~~------------------------~~-~~~-------------------g~~~~~~~~~~~~~~~ip~~  116 (325)
T cd08253          81 VGDRVWLTNLG------------------------WG-RRQ-------------------GTAAEYVVVPADQLVPLPDG  116 (325)
T ss_pred             CCCEEEEeccc------------------------cC-CCC-------------------cceeeEEEecHHHcEeCCCC
Confidence            99999865320                        00 012                   38999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN  252 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~  252 (362)
                      ++.++++.+.+++.+||+.+....++.++++++|+|+ |.+|++++++++.+|+ +|+++++++++.+.++++|++++++
T Consensus       117 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  195 (325)
T cd08253         117 VSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFN  195 (325)
T ss_pred             CCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEe
Confidence            9999999999999999998877789999999999997 9999999999999999 8999999999999999999998888


Q ss_pred             CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022          253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF  331 (362)
Q Consensus       253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  331 (362)
                      ...   .++.+.+.+...+ ++|.+++++|+.. ....++.++++ |+++.+|...  ...++++..++.++.++.+...
T Consensus       196 ~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  268 (325)
T cd08253         196 YRA---EDLADRILAATAGQGVDVIIEVLANVN-LAKDLDVLAPG-GRIVVYGSGG--LRGTIPINPLMAKEASIRGVLL  268 (325)
T ss_pred             CCC---cCHHHHHHHHcCCCceEEEEECCchHH-HHHHHHhhCCC-CEEEEEeecC--CcCCCChhHHHhcCceEEeeeh
Confidence            766   6778888887766 8999999999876 78889999997 9999998743  3345666666677888887764


Q ss_pred             cCCC---ccccHHHHHHHHHcCCcccceecc
Q 018022          332 GGLK---AKSDIPILLKRYMDKWSYVPFSGT  359 (362)
Q Consensus       332 ~~~~---~~~~l~~~l~~~~~g~l~~~~~~~  359 (362)
                      +...   ..+.++.+.++++++.+++.+..+
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  299 (325)
T cd08253         269 YTATPEERAAAAEAIAAGLADGALRPVIARE  299 (325)
T ss_pred             hhcCHHHHHHHHHHHHHHHHCCCccCccccE
Confidence            4321   123466677788888887765444

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=3.3e-32  Score=257.62  Aligned_cols=277  Identities=25%  Similarity=0.382  Sum_probs=211.2

Q ss_pred             eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCC----CCCccccccceEEE---EEeC-CCCCCCCCCCEEEe
Q 018022           29 LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPA----VFPRILGHEAIGVV---ESVG-ENVDGVVEGDVVIP  100 (362)
Q Consensus        29 l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~----~~p~~~G~e~~G~V---v~vG-~~v~~~~~Gd~V~~  100 (362)
                      ...++.+.|.|++++++|++.++++|+.|..++.|.+...    .+|.+++.++.|++   ...| ..+..+..||.+..
T Consensus        20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~   99 (347)
T KOG1198|consen   20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA   99 (347)
T ss_pred             EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence            5557899999999999999999999999999999888653    47755666655553   3344 23334556665542


Q ss_pred             eCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccchh
Q 018022          101 HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRAC  180 (362)
Q Consensus       101 ~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~aa  180 (362)
                      ..                              .                   .|+|+||+++|...++++|++++++++|
T Consensus       100 ~~------------------------------~-------------------~g~~aey~v~p~~~~~~~P~~l~~~~aa  130 (347)
T KOG1198|consen  100 FL------------------------------S-------------------SGGLAEYVVVPEKLLVKIPESLSFEEAA  130 (347)
T ss_pred             cc------------------------------C-------------------CCceeeEEEcchhhccCCCCccChhhhh
Confidence            21                              1                   2499999999999999999999999999


Q ss_pred             ccccchhhhHHHHHHhc------CCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022          181 LLSCGVSTGVGAAWRTA------NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  253 (362)
Q Consensus       181 ~~~~~~~ta~~~l~~~~------~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~  253 (362)
                      +++.++.|||.++....      ++++|++|||+|+ |++|++++|+|+..++ ..+++.++++++++++++|+++++|+
T Consensus       131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy  209 (347)
T KOG1198|consen  131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDY  209 (347)
T ss_pred             cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecC
Confidence            99999999999999999      9999999999987 9999999999999996 66666668999999999999999999


Q ss_pred             CCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC---CCCCccccCHH-HHHh---cCcEE
Q 018022          254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD---QPGSQLSLSSF-EVLH---SGKIL  326 (362)
Q Consensus       254 ~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~---~~~~~~~~~~~-~~~~---~~~~i  326 (362)
                      ++   +++.+.+++.++++||+||||+|+.. ......++..+ |+...++..   ....... .+. .+..   ..+.+
T Consensus       210 ~~---~~~~e~~kk~~~~~~DvVlD~vg~~~-~~~~~~~l~~~-g~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  283 (347)
T KOG1198|consen  210 KD---ENVVELIKKYTGKGVDVVLDCVGGST-LTKSLSCLLKG-GGGAYIGLVGDELANYKLD-DLWQSANGIKLYSLGL  283 (347)
T ss_pred             CC---HHHHHHHHhhcCCCccEEEECCCCCc-cccchhhhccC-CceEEEEeccccccccccc-cchhhhhhhhheeeee
Confidence            98   99999999988449999999999975 67777788776 764444432   1111111 000 0111   01111


Q ss_pred             EEeec---cCCCccccHHHHHHHHHcCCcccceecccC
Q 018022          327 MGSLF---GGLKAKSDIPILLKRYMDKWSYVPFSGTRA  361 (362)
Q Consensus       327 ~g~~~---~~~~~~~~l~~~l~~~~~g~l~~~~~~~~~  361 (362)
                      .+...   ......+.++.+.+++++|+|+|.++++|.
T Consensus       284 ~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~i~~~~p  321 (347)
T KOG1198|consen  284 KGVNYRWLYFVPSAEYLKALVELIEKGKIKPVIDSVYP  321 (347)
T ss_pred             eccceeeeeecCCHHHHHHHHHHHHcCcccCCcceeee
Confidence            11110   011235889999999999999999999874

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=1.1e-31  Score=256.55  Aligned_cols=287  Identities=20%  Similarity=0.207  Sum_probs=222.0

Q ss_pred             eeEEEeccCCCc---eEEEEeecCCCC-CCeEEEEEeeeecchhhhhhhhcCCC---------------CCCCCcccccc
Q 018022           17 CRAAIATAPGEP---LVIDEVIVDPPN-SHEVRVRIICTSLCHSDVTFWKMKDF---------------PAVFPRILGHE   77 (362)
Q Consensus        17 ~ka~~~~~~~~~---l~l~~~~~p~~~-~~eVlVkv~~~~i~~~d~~~~~g~~~---------------~~~~p~~~G~e   77 (362)
                      |||+++.+++++   +++++++.|.|. ++||+|||+++++|++|+..+.|...               ....|.++|||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e   80 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD   80 (350)
T ss_pred             CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence            789999888775   889999999994 99999999999999999998877421               23568899999


Q ss_pred             ceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeccccccccee
Q 018022           78 AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFS  157 (362)
Q Consensus        78 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a  157 (362)
                      ++|+|+++|+++++|++||+|+..+..                                              +..|+|+
T Consensus        81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~----------------------------------------------~~~g~~~  114 (350)
T cd08248          81 CSGVVVDIGSGVKSFEIGDEVWGAVPP----------------------------------------------WSQGTHA  114 (350)
T ss_pred             eEEEEEecCCCcccCCCCCEEEEecCC----------------------------------------------CCCccce
Confidence            999999999999999999999864321                                              1124999


Q ss_pred             eeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHhcCCCC----CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEE
Q 018022          158 EYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV----GSTVVIFGL-GSIGLAVAEGARLCGATRIIGV  232 (362)
Q Consensus       158 ~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~----g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~  232 (362)
                      +|+.++.++++++|++++.++++.+++.+.+||+++.+...+.+    |++|+|+|+ |.+|++++++|+.+|+ +|+++
T Consensus       115 ~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~  193 (350)
T cd08248         115 EYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTT  193 (350)
T ss_pred             eEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEE
Confidence            99999999999999999999999999999999998777777654    999999996 9999999999999999 78877


Q ss_pred             cCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCc-
Q 018022          233 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ-  311 (362)
Q Consensus       233 ~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~-  311 (362)
                      .++ ++.+.++++|.+.+++..+   .++.+.+...  +++|++||++|+. ....++++++++ |+++.+|....... 
T Consensus       194 ~~~-~~~~~~~~~g~~~~~~~~~---~~~~~~l~~~--~~vd~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~  265 (350)
T cd08248         194 CST-DAIPLVKSLGADDVIDYNN---EDFEEELTER--GKFDVILDTVGGD-TEKWALKLLKKG-GTYVTLVSPLLKNTD  265 (350)
T ss_pred             eCc-chHHHHHHhCCceEEECCC---hhHHHHHHhc--CCCCEEEECCChH-HHHHHHHHhccC-CEEEEecCCcccccc
Confidence            754 6788889999988888765   4555555432  3799999999987 589999999997 99999986421111 


Q ss_pred             -cccC----H--HHHHhc-------CcEEEEeeccCCCccccHHHHHHHHHcCCcccceeccc
Q 018022          312 -LSLS----S--FEVLHS-------GKILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       312 -~~~~----~--~~~~~~-------~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                       ..+.    .  ..++..       ...+....  .....+.+.+++++++++.+.+.+..+|
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~  326 (350)
T cd08248         266 KLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGF--FSPSGSALDELAKLVEDGKIKPVIDKVF  326 (350)
T ss_pred             cccccchhhhhHHHHHHHHHHHHhcCCCeeEEE--ECCCHHHHHHHHHHHhCCCEecccceee
Confidence             1110    0  011111       11111111  1112467999999999999887654443

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=8.9e-31  Score=245.36  Aligned_cols=285  Identities=23%  Similarity=0.283  Sum_probs=234.6

Q ss_pred             eEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022           18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (362)
Q Consensus        18 ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G   95 (362)
                      ||+.+..++..  +.+++.+.|.+.++||+|||.++++|++|+....+..+. .+|.++|||++|+|+.+|+++.+|++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G   79 (320)
T cd05286           1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVG   79 (320)
T ss_pred             CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCC
Confidence            46666665543  667777777789999999999999999999888776543 457789999999999999999999999


Q ss_pred             CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (362)
Q Consensus        96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~  175 (362)
                      |+|+...                              .                   .|+|++|+.++.+.++++|++++
T Consensus        80 ~~V~~~~------------------------------~-------------------~g~~~~~~~~~~~~~~~~p~~~~  110 (320)
T cd05286          80 DRVAYAG------------------------------P-------------------PGAYAEYRVVPASRLVKLPDGIS  110 (320)
T ss_pred             CEEEEec------------------------------C-------------------CCceeEEEEecHHHceeCCCCCC
Confidence            9997431                              0                   13899999999999999999999


Q ss_pred             ccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  254 (362)
Q Consensus       176 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~  254 (362)
                      ..+++.+.+...++|+++.+..++.+|++|+|+|+ |.+|++++++++.+|+ .++++++++++.+.++++|++++++.+
T Consensus       111 ~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~  189 (320)
T cd05286         111 DETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR  189 (320)
T ss_pred             HHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC
Confidence            99999888899999998878889999999999996 9999999999999999 899999999999999999999988877


Q ss_pred             CCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccC
Q 018022          255 NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG  333 (362)
Q Consensus       255 ~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  333 (362)
                      +   .++.+.+.+.+.+ ++|.+|+|+++. ....++++++++ |+++.+|.... ....+++..+..+++++.+.....
T Consensus       190 ~---~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  263 (320)
T cd05286         190 D---EDFVERVREITGGRGVDVVYDGVGKD-TFEGSLDSLRPR-GTLVSFGNASG-PVPPFDLLRLSKGSLFLTRPSLFH  263 (320)
T ss_pred             c---hhHHHHHHHHcCCCCeeEEEECCCcH-hHHHHHHhhccC-cEEEEEecCCC-CCCccCHHHHHhcCcEEEEEehhh
Confidence            6   6788888888776 899999999985 488999999997 99999997432 233455555557889887654433


Q ss_pred             CC-c----cccHHHHHHHHHcCCcccceecc
Q 018022          334 LK-A----KSDIPILLKRYMDKWSYVPFSGT  359 (362)
Q Consensus       334 ~~-~----~~~l~~~l~~~~~g~l~~~~~~~  359 (362)
                      .. .    .+.+.+++++++++.+++.+...
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (320)
T cd05286         264 YIATREELLARAAELFDAVASGKLKVEIGKR  294 (320)
T ss_pred             hcCCHHHHHHHHHHHHHHHHCCCCcCcccce
Confidence            22 1    13456788999999988765443

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=3e-31  Score=237.23  Aligned_cols=270  Identities=20%  Similarity=0.176  Sum_probs=222.5

Q ss_pred             eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEe--CCCCCCCCCCCEEEeeCCCCC
Q 018022           29 LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESV--GENVDGVVEGDVVIPHFLADC  106 (362)
Q Consensus        29 l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~v--G~~v~~~~~Gd~V~~~~~~~~  106 (362)
                      |+++++++|+|+++|||||..|.|+.+..+.-+... +..-.|.-+|...+|.++..  -|..+.|++||.|+..     
T Consensus        27 F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d~-~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~-----  100 (340)
T COG2130          27 FRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSDA-PSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV-----  100 (340)
T ss_pred             ceeEeccCCCCCcCceEEEEEEeccCHHHeecccCC-cccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec-----
Confidence            999999999999999999999999998544322222 22334777787776666553  2567789999999732     


Q ss_pred             CCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccc--hhcccc
Q 018022          107 TECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR--ACLLSC  184 (362)
Q Consensus       107 ~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~--aa~~~~  184 (362)
                                                                     .+|+||..++.+.+.+++++.-...  ...+.+
T Consensus       101 -----------------------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGm  133 (340)
T COG2130         101 -----------------------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGM  133 (340)
T ss_pred             -----------------------------------------------ccceEEEeechhhceecCCCCCCcchHHhhcCC
Confidence                                                           2899999999999999986643222  334677


Q ss_pred             chhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcEEEcCCCCCCccHH
Q 018022          185 GVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVS  262 (362)
Q Consensus       185 ~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~  262 (362)
                      +..|||.+|.+....++|++|+|.+| |++|..+.|+||..|+ +|+++...++|.+++++ +|+|.++|++.   +++.
T Consensus       134 pG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~---~d~~  209 (340)
T COG2130         134 PGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA---EDFA  209 (340)
T ss_pred             chHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc---ccHH
Confidence            89999999999999999999999987 9999999999999999 99999999999999988 99999999999   8999


Q ss_pred             HHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCcc-----ccCHHHHHhcCcEEEEeeccCCCc-
Q 018022          263 QIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL-----SLSSFEVLHSGKILMGSLFGGLKA-  336 (362)
Q Consensus       263 ~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~-----~~~~~~~~~~~~~i~g~~~~~~~~-  336 (362)
                      +++++.++.|+|+.||++|++- +...+..|+.. +||.++|.-......     +-.+..++.|++++.|+...+... 
T Consensus       210 ~~L~~a~P~GIDvyfeNVGg~v-~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~  287 (340)
T COG2130         210 QALKEACPKGIDVYFENVGGEV-LDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQ  287 (340)
T ss_pred             HHHHHHCCCCeEEEEEcCCchH-HHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhh
Confidence            9999999889999999999987 99999999997 999999974322211     223345777899999998733321 


Q ss_pred             --cccHHHHHHHHHcCCccccee
Q 018022          337 --KSDIPILLKRYMDKWSYVPFS  357 (362)
Q Consensus       337 --~~~l~~~l~~~~~g~l~~~~~  357 (362)
                        .+.++++..|+++|+|+.+.+
T Consensus       288 ~~~e~~~~l~~wv~~GKi~~~et  310 (340)
T COG2130         288 RFPEALRELGGWVKEGKIQYRET  310 (340)
T ss_pred             hhHHHHHHHHHHHHcCceeeEee
Confidence              367899999999999998874

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=1.5e-30  Score=246.11  Aligned_cols=284  Identities=14%  Similarity=0.116  Sum_probs=225.1

Q ss_pred             eeEEEeccCCC--ceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 018022           17 CRAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV   93 (362)
Q Consensus        17 ~ka~~~~~~~~--~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~   93 (362)
                      |||+++.++++  .++++++|.|+|+++||+||+.++++|++|...+.+.... ..+|.++|||++|+|++  +++++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~   78 (324)
T cd08288           1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK   78 (324)
T ss_pred             CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence            78999998885  3999999999999999999999999999999888776532 34688899999999999  6778899


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      +||+|+.....                        .+...                   .|+|++|+.++.+.++++|++
T Consensus        79 ~Gd~V~~~~~~------------------------~~~~~-------------------~g~~~~~~~v~~~~~~~lp~~  115 (324)
T cd08288          79 PGDRVVLTGWG------------------------VGERH-------------------WGGYAQRARVKADWLVPLPEG  115 (324)
T ss_pred             CCCEEEECCcc------------------------CCCCC-------------------CCcceeEEEEchHHeeeCCCC
Confidence            99999864210                        11111                   248999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHH--HhcCCC-CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE
Q 018022          174 VPPNRACLLSCGVSTGVGAAW--RTANVE-VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE  249 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~--~~~~~~-~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~  249 (362)
                      ++.++++.+++.+++++.++.  ...... ++++|+|+|+ |++|++++|+|+.+|+ ++++++.++++.+.++++|+++
T Consensus       116 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~  194 (324)
T cd08288         116 LSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASE  194 (324)
T ss_pred             CCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCE
Confidence            999999999988888887643  224445 6789999998 9999999999999999 8899888999999999999999


Q ss_pred             EEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 018022          250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS  329 (362)
Q Consensus       250 vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  329 (362)
                      ++++++     ....++.+..+++|.++|++++.. +...+..++.+ |+++.+|.... ....+++..++.+++++.+.
T Consensus       195 ~~~~~~-----~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~-g~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~  266 (324)
T cd08288         195 IIDRAE-----LSEPGRPLQKERWAGAVDTVGGHT-LANVLAQTRYG-GAVAACGLAGG-ADLPTTVMPFILRGVTLLGI  266 (324)
T ss_pred             EEEcch-----hhHhhhhhccCcccEEEECCcHHH-HHHHHHHhcCC-CEEEEEEecCC-CCCCcchhhhhccccEEEEE
Confidence            998765     223555555557899999999754 77888889997 99999997522 23345555565789999997


Q ss_pred             eccCCCc---cccHHHHHHHHHcCCccc
Q 018022          330 LFGGLKA---KSDIPILLKRYMDKWSYV  354 (362)
Q Consensus       330 ~~~~~~~---~~~l~~~l~~~~~g~l~~  354 (362)
                      .+.....   .+.++.+++++.++.+++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (324)
T cd08288         267 DSVMAPIERRRAAWARLARDLDPALLEA  294 (324)
T ss_pred             EeecccchhhHHHHHHHHHHHhcCCccc
Confidence            6433211   235667777888888875

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=8.6e-31  Score=247.01  Aligned_cols=285  Identities=23%  Similarity=0.283  Sum_probs=227.6

Q ss_pred             eeEEEeccCC--CceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 018022           17 CRAAIATAPG--EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE   94 (362)
Q Consensus        17 ~ka~~~~~~~--~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~   94 (362)
                      |||+++.+++  +.+++++++.|.+.+++|+||+.++++|++|+....+.......|.++|||++|+|+.+|++++.+++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~   80 (325)
T cd08271           1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV   80 (325)
T ss_pred             CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence            7999999999  35999999999999999999999999999999888776543334788999999999999999999999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022           95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (362)
Q Consensus        95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l  174 (362)
                      ||+|+..+..                           ..                   .|+|++|+.++...++++|+++
T Consensus        81 Gd~V~~~~~~---------------------------~~-------------------~~~~~s~~~~~~~~~~~ip~~~  114 (325)
T cd08271          81 GDRVAYHASL---------------------------AR-------------------GGSFAEYTVVDARAVLPLPDSL  114 (325)
T ss_pred             CCEEEeccCC---------------------------CC-------------------CccceeEEEeCHHHeEECCCCC
Confidence            9999864310                           01                   2389999999999999999999


Q ss_pred             CccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  253 (362)
Q Consensus       175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~  253 (362)
                      +..+++.+.+.+.+||+++.+..++.+|++++|+|+ |.+|++++++++..|+ .++++. ++++.+.+.++|++.+++.
T Consensus       115 ~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~  192 (325)
T cd08271         115 SFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDY  192 (325)
T ss_pred             CHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecC
Confidence            999999998899999998878889999999999998 8899999999999999 777776 6778888888999988887


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCH--HHHHhcCcEEEEee
Q 018022          254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS--FEVLHSGKILMGSL  330 (362)
Q Consensus       254 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~--~~~~~~~~~i~g~~  330 (362)
                      ..   .++.+.+.+...+ ++|.+++++++.. ....+++++++ |+++.+|..... . ....  ..+..+++.+.+..
T Consensus       193 ~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-G~~v~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~  265 (325)
T cd08271         193 ND---EDVCERIKEITGGRGVDAVLDTVGGET-AAALAPTLAFN-GHLVCIQGRPDA-S-PDPPFTRALSVHEVALGAAH  265 (325)
T ss_pred             CC---ccHHHHHHHHcCCCCCcEEEECCCcHh-HHHHHHhhccC-CEEEEEcCCCCC-c-chhHHhhcceEEEEEecccc
Confidence            76   6677888887776 8999999999876 66789999997 999999753221 1 1111  11222333333332


Q ss_pred             ccCC-----CccccHHHHHHHHHcCCcccce
Q 018022          331 FGGL-----KAKSDIPILLKRYMDKWSYVPF  356 (362)
Q Consensus       331 ~~~~-----~~~~~l~~~l~~~~~g~l~~~~  356 (362)
                      ....     ...+.+.+++++++++.+++..
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  296 (325)
T cd08271         266 DHGDPAAWQDLRYAGEELLELLAAGKLEPLV  296 (325)
T ss_pred             cccchhhHHHHHHHHHHHHHHHHCCCeeecc
Confidence            1111     1124567888999999887643

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.5e-30  Score=245.01  Aligned_cols=284  Identities=21%  Similarity=0.238  Sum_probs=234.3

Q ss_pred             eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 018022           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV   93 (362)
Q Consensus        17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~   93 (362)
                      |||+++.+++.+  +++++.+.|.+.+++|+|++.++++|++|.....+.... ...|.++|||++|+|+++|+++..|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (326)
T cd08272           1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR   80 (326)
T ss_pred             CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence            789999988764  788888888889999999999999999999888776432 34578899999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      +||+|+....                          |...                  ..|+|++|+.++...++++|++
T Consensus        81 ~Gd~V~~~~~--------------------------~~~~------------------~~g~~~~~~~v~~~~~~~~p~~  116 (326)
T cd08272          81 VGDEVYGCAG--------------------------GLGG------------------LQGSLAEYAVVDARLLALKPAN  116 (326)
T ss_pred             CCCEEEEccC--------------------------CcCC------------------CCCceeEEEEecHHHcccCCCC
Confidence            9999985421                          0000                  0248999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN  252 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~  252 (362)
                      ++..+++.+++.+.+||+++.+..++.++++++|+|+ |.+|++++++++.+|+ +|++++++ ++.+.++++|.+.+++
T Consensus       117 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~  194 (326)
T cd08272         117 LSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIY  194 (326)
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEe
Confidence            9999999998899999998878899999999999986 9999999999999999 88888887 8999999999988888


Q ss_pred             CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022          253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF  331 (362)
Q Consensus       253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  331 (362)
                      ...   . +.+.+.+.+.+ ++|.++|++++.. +...+++++++ |+++.+|...   .  .++.....+++.+.+..+
T Consensus       195 ~~~---~-~~~~~~~~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~---~--~~~~~~~~~~~~~~~~~~  263 (326)
T cd08272         195 YRE---T-VVEYVAEHTGGRGFDVVFDTVGGET-LDASFEAVALY-GRVVSILGGA---T--HDLAPLSFRNATYSGVFT  263 (326)
T ss_pred             cch---h-HHHHHHHhcCCCCCcEEEECCChHH-HHHHHHHhccC-CEEEEEecCC---c--cchhhHhhhcceEEEEEc
Confidence            766   5 77888888877 8999999999865 88899999997 9999998642   2  222233467888888764


Q ss_pred             cC--CC------ccccHHHHHHHHHcCCccccee
Q 018022          332 GG--LK------AKSDIPILLKRYMDKWSYVPFS  357 (362)
Q Consensus       332 ~~--~~------~~~~l~~~l~~~~~g~l~~~~~  357 (362)
                      ..  ..      ..+.+++++++++++.+++.+.
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~  297 (326)
T cd08272         264 LLPLLTGEGRAHHGEILREAARLVERGQLRPLLD  297 (326)
T ss_pred             ccccccccchhhHHHHHHHHHHHHHCCCcccccc
Confidence            42  10      1356888899999999886543

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=2e-30  Score=245.63  Aligned_cols=282  Identities=20%  Similarity=0.200  Sum_probs=225.8

Q ss_pred             eeEEEeccCCC------ceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCC---CCCCCccccccceEEEEEeCC
Q 018022           17 CRAAIATAPGE------PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGE   87 (362)
Q Consensus        17 ~ka~~~~~~~~------~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~---~~~~p~~~G~e~~G~Vv~vG~   87 (362)
                      .||+++.+..+      .+++++++.|++.+++|+||+.++++|++|.....+...   +...+.++|+|++|+|+++|+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~   81 (329)
T cd05288           2 NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS   81 (329)
T ss_pred             CcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence            46667665431      288999999999999999999999999987655544321   122356789999999999996


Q ss_pred             CCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec-Cc
Q 018022           88 NVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI-AH  166 (362)
Q Consensus        88 ~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~-~~  166 (362)
                      .  +|++||+|+..                                                    ++|++|+.++. +.
T Consensus        82 ~--~~~~Gd~V~~~----------------------------------------------------~~~~~~~~v~~~~~  107 (329)
T cd05288          82 P--DFKVGDLVSGF----------------------------------------------------LGWQEYAVVDGASG  107 (329)
T ss_pred             C--CCCCCCEEecc----------------------------------------------------cceEEEEEecchhh
Confidence            4  79999999731                                                    27999999999 99


Q ss_pred             eEEcCCCCC--ccchhc-cccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH
Q 018022          167 VVKVDPTVP--PNRACL-LSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG  242 (362)
Q Consensus       167 ~~~~P~~l~--~~~aa~-~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~  242 (362)
                      ++++|++++  +.+++. +.+.+.+||+++.....+.++++|||+|+ |.+|++++++|+..|+ +|+++++++++.+.+
T Consensus       108 ~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~  186 (329)
T cd05288         108 LRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWL  186 (329)
T ss_pred             cEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence            999999985  445544 77899999998877788999999999996 9999999999999999 899999999999999


Q ss_pred             Hh-cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCcc----ccCHH
Q 018022          243 KR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL----SLSSF  317 (362)
Q Consensus       243 ~~-~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~----~~~~~  317 (362)
                      ++ +|+++++++++   .++.+.+.+.+++++|++|||+|+. .++.++++++++ |+++.+|........    .++..
T Consensus       187 ~~~~g~~~~~~~~~---~~~~~~v~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~  261 (329)
T cd05288         187 VEELGFDAAINYKT---PDLAEALKEAAPDGIDVYFDNVGGE-ILDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLG  261 (329)
T ss_pred             HhhcCCceEEecCC---hhHHHHHHHhccCCceEEEEcchHH-HHHHHHHhcCCC-ceEEEEeeccCcccccccccccHH
Confidence            88 99999998876   6777888777755899999999985 489999999997 999999864332211    13455


Q ss_pred             HHHhcCcEEEEeeccCCCc--cccHHHHHHHHHcCCcccceec
Q 018022          318 EVLHSGKILMGSLFGGLKA--KSDIPILLKRYMDKWSYVPFSG  358 (362)
Q Consensus       318 ~~~~~~~~i~g~~~~~~~~--~~~l~~~l~~~~~g~l~~~~~~  358 (362)
                      .++.++.++.++.+.....  .+.+.+++++++++.+++....
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~  304 (329)
T cd05288         262 NIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDV  304 (329)
T ss_pred             HHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccccc
Confidence            6677899999876544321  2567889999999998875433

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.98  E-value=4.3e-30  Score=241.65  Aligned_cols=286  Identities=22%  Similarity=0.256  Sum_probs=237.1

Q ss_pred             eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 018022           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV   93 (362)
Q Consensus        17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~   93 (362)
                      |||+.+..++..  +++++.+.|.+.+++++|||.++++|++|.....+..+. ..+|.++|||++|+|+.+|+++.+|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (325)
T TIGR02824         1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK   80 (325)
T ss_pred             CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence            688898876654  667777777789999999999999999999888765532 34578999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      +||+|+...                              .+                   |+|++|+.++...++++|++
T Consensus        81 ~Gd~V~~~~------------------------------~~-------------------~~~~~~~~~~~~~~~~ip~~  111 (325)
T TIGR02824        81 VGDRVCALV------------------------------AG-------------------GGYAEYVAVPAGQVLPVPEG  111 (325)
T ss_pred             CCCEEEEcc------------------------------CC-------------------CcceeEEEecHHHcEeCCCC
Confidence            999997431                              01                   38999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN  252 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~  252 (362)
                      ++..+++.+.+.+.++|+++.+...++++++++|+|+ |.+|++++++++.+|+ +++++.+++++.+.++++|.+.+++
T Consensus       112 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  190 (325)
T TIGR02824       112 LSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAIN  190 (325)
T ss_pred             CCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence            9999999898899999998888899999999999997 9999999999999999 8999999999999998899888887


Q ss_pred             CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022          253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF  331 (362)
Q Consensus       253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  331 (362)
                      ...   .++.+.++...++ ++|++++++|... +...+++++++ |+++.+|...... ..+++..++.+++++.+...
T Consensus       191 ~~~---~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~  264 (325)
T TIGR02824       191 YRE---EDFVEVVKAETGGKGVDVILDIVGGSY-LNRNIKALALD-GRIVQIGFQGGRK-AELDLGPLLAKRLTITGSTL  264 (325)
T ss_pred             cCc---hhHHHHHHHHcCCCCeEEEEECCchHH-HHHHHHhhccC-cEEEEEecCCCCc-CCCChHHHHhcCCEEEEEeh
Confidence            765   6677888877776 8999999999864 88899999997 9999998743222 25666667788999999876


Q ss_pred             cCCCc-------cccHHHHHHHHHcCCcccceec
Q 018022          332 GGLKA-------KSDIPILLKRYMDKWSYVPFSG  358 (362)
Q Consensus       332 ~~~~~-------~~~l~~~l~~~~~g~l~~~~~~  358 (362)
                      .....       .+.+.+++++++++.+++....
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  298 (325)
T TIGR02824       265 RARPVAEKAAIAAELREHVWPLLASGRVRPVIDK  298 (325)
T ss_pred             hhcchhhhHHHHHHHHHHHHHHHHCCcccCcccc
Confidence            54211       1335667889999988765433

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.98  E-value=7.4e-30  Score=240.35  Aligned_cols=292  Identities=25%  Similarity=0.304  Sum_probs=236.0

Q ss_pred             eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 018022           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV   93 (362)
Q Consensus        17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~   93 (362)
                      |||+++...+.+  +++++.+.|.+.+++++|+|.++++|++|..+..+.... ..+|.++|||++|+|+.+|+++.+|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (328)
T cd08268           1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA   80 (328)
T ss_pred             CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence            688999876643  777788888889999999999999999999887776533 34578899999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      +||+|+..+..                         +...+                   |++++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~~-------------------------~~~~~-------------------g~~~~~~~~~~~~~~~~p~~  116 (328)
T cd08268          81 VGDRVSVIPAA-------------------------DLGQY-------------------GTYAEYALVPAAAVVKLPDG  116 (328)
T ss_pred             CCCEEEecccc-------------------------ccCCC-------------------ccceEEEEechHhcEeCCCC
Confidence            99999865321                         01112                   38999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN  252 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~  252 (362)
                      ++.++++.+.+.+.++|.++.....+.++++++|+|+ |.+|++++++++..|+ .+++++++.++.+.++++|.+.+++
T Consensus       117 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  195 (328)
T cd08268         117 LSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIV  195 (328)
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence            9999999999999999998878889999999999998 9999999999999999 8999998999999998899988888


Q ss_pred             CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022          253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF  331 (362)
Q Consensus       253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  331 (362)
                      .+.   .++.+.+.+...+ ++|++++++|+.. ...++++++++ |+++.+|.... ....++....+.+++.+.+...
T Consensus       196 ~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~  269 (328)
T cd08268         196 TDE---EDLVAEVLRITGGKGVDVVFDPVGGPQ-FAKLADALAPG-GTLVVYGALSG-EPTPFPLKAALKKSLTFRGYSL  269 (328)
T ss_pred             cCC---ccHHHHHHHHhCCCCceEEEECCchHh-HHHHHHhhccC-CEEEEEEeCCC-CCCCCchHHHhhcCCEEEEEec
Confidence            776   6777778877766 8999999999854 88899999997 99999987433 3334555545778999988765


Q ss_pred             cCCC-ccc----cHHHHHHHHHcCCcccceecc
Q 018022          332 GGLK-AKS----DIPILLKRYMDKWSYVPFSGT  359 (362)
Q Consensus       332 ~~~~-~~~----~l~~~l~~~~~g~l~~~~~~~  359 (362)
                      .... .++    .++.+.++++++.+.+....+
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (328)
T cd08268         270 DEITLDPEARRRAIAFILDGLASGALKPVVDRV  302 (328)
T ss_pred             ccccCCHHHHHHHHHHHHHHHHCCCCcCCcccE
Confidence            4311 122    345555667788877654333

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.98  E-value=9.5e-30  Score=243.73  Aligned_cols=291  Identities=18%  Similarity=0.199  Sum_probs=216.7

Q ss_pred             eEEEeccCCCceEEEEeecCCC---CCCeEEEEEeeeecchhhhhhhhcCCCCC-CCCccccccceEEEEEeCCCCC-CC
Q 018022           18 RAAIATAPGEPLVIDEVIVDPP---NSHEVRVRIICTSLCHSDVTFWKMKDFPA-VFPRILGHEAIGVVESVGENVD-GV   92 (362)
Q Consensus        18 ka~~~~~~~~~l~l~~~~~p~~---~~~eVlVkv~~~~i~~~d~~~~~g~~~~~-~~p~~~G~e~~G~Vv~vG~~v~-~~   92 (362)
                      |+++++++++++++++++.|.|   .++||+||+.++++|++|+..+.+..... ..|.++|+|++|+|+++|++++ +|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~   81 (352)
T cd08247           2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW   81 (352)
T ss_pred             ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence            6899999988888888777776   89999999999999999998775432222 2478899999999999999998 89


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC----ceE
Q 018022           93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA----HVV  168 (362)
Q Consensus        93 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~----~~~  168 (362)
                      ++||+|+......|                         ..                   .|+|++|++++..    .++
T Consensus        82 ~~Gd~V~~~~~~~~-------------------------~~-------------------~g~~~~~~~v~~~~~~~~~~  117 (352)
T cd08247          82 KVGDEVCGIYPHPY-------------------------GG-------------------QGTLSQYLLVDPKKDKKSIT  117 (352)
T ss_pred             CCCCEEEEeecCCC-------------------------CC-------------------CceeeEEEEEccccccceeE
Confidence            99999986532110                         01                   2489999999987    799


Q ss_pred             EcCCCCCccchhccccchhhhHHHHHHhc-CCCCCCEEEEECC-ChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHhc
Q 018022          169 KVDPTVPPNRACLLSCGVSTGVGAAWRTA-NVEVGSTVVIFGL-GSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRF  245 (362)
Q Consensus       169 ~~P~~l~~~~aa~~~~~~~ta~~~l~~~~-~~~~g~~vlI~Ga-g~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~~  245 (362)
                      ++|+++++.+++.+++++.+||+++.+.. ++++|++|+|+|+ |.+|++++++|+.+| .+.++++.+ +++.+.++++
T Consensus       118 ~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~~~~  196 (352)
T cd08247         118 RKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELNKKL  196 (352)
T ss_pred             ECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHHHHh
Confidence            99999999999999999999999876666 7999999999998 899999999999875 436777764 5556688899


Q ss_pred             CCcEEEcCCCCCCcc---HHHH-HHhhcCC-CccEEEEcCCCHHHHHHHHHHhc---cCCceEEEEccCCCC--Cccc--
Q 018022          246 GVTEFVNSKNCGDKS---VSQI-IIDMTDG-GADYCFECVGLASLVQEAYACCR---KGWGKTIVLGVDQPG--SQLS--  313 (362)
Q Consensus       246 g~~~vv~~~~~~~~~---~~~~-i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~---~~~G~iv~~G~~~~~--~~~~--  313 (362)
                      |++++++.++   .+   +... ++..+++ ++|++|||+|+......++++++   ++ |+++.++.....  ....  
T Consensus       197 g~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~~~~~~~~~~  272 (352)
T cd08247         197 GADHFIDYDA---HSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYKANYKKDTFN  272 (352)
T ss_pred             CCCEEEecCC---CcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCcccccchhhh
Confidence            9999998766   33   4444 4444434 89999999999666889999999   97 999987532211  0001  


Q ss_pred             ------cCHH----HHHhcCcEEEEeeccCCCccccHHHHHHHHHcCCcccceecc
Q 018022          314 ------LSSF----EVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGT  359 (362)
Q Consensus       314 ------~~~~----~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~  359 (362)
                            +...    ....+...+.......  ..+.+++++++++++.|++.+..+
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~  326 (352)
T cd08247         273 SWDNPSANARKLFGSLGLWSYNYQFFLLDP--NADWIEKCAELIADGKVKPPIDSV  326 (352)
T ss_pred             hccccchhhhhhhhhhcCCCcceEEEEecC--CHHHHHHHHHHHhCCCeEeeeccE
Confidence                  1111    1112223333221111  125688899999999988765444

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=4.3e-30  Score=243.49  Aligned_cols=283  Identities=25%  Similarity=0.280  Sum_probs=223.0

Q ss_pred             eEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCCC
Q 018022           18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVE   94 (362)
Q Consensus        18 ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~~   94 (362)
                      ||+++...+.+  +++++.+.|.|.++||+||+.++++|++|..++.+..+. ..+|.++|+|++|+|+++|++++.|++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~   81 (331)
T cd08273           2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV   81 (331)
T ss_pred             eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence            78888887754  888999999999999999999999999999988776543 356889999999999999999999999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022           95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (362)
Q Consensus        95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l  174 (362)
                      ||+|+..+.                              +                   |+|++|+.++.+.++++|+++
T Consensus        82 Gd~V~~~~~------------------------------~-------------------g~~~~~~~~~~~~~~~~p~~~  112 (331)
T cd08273          82 GDRVAALTR------------------------------V-------------------GGNAEYINLDAKYLVPVPEGV  112 (331)
T ss_pred             CCEEEEeCC------------------------------C-------------------cceeeEEEechHHeEECCCCC
Confidence            999985421                              1                   389999999999999999999


Q ss_pred             CccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  253 (362)
Q Consensus       175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~  253 (362)
                      +..+++.+.+.+.+||+++.+..++.++++|+|+|+ |.+|++++++|+.+|+ +|+++.. +++.+.++++|+.. ++.
T Consensus       113 ~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~  189 (331)
T cd08273         113 DAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDY  189 (331)
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcC
Confidence            999999999999999998877788999999999997 9999999999999999 8888887 88899999999754 444


Q ss_pred             CCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccC--H------------HHH
Q 018022          254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLS--S------------FEV  319 (362)
Q Consensus       254 ~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~--~------------~~~  319 (362)
                      ..   .++.+.  ....+++|.++|++|+.. +..++++++++ |+++.+|.........++  +            ...
T Consensus       190 ~~---~~~~~~--~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (331)
T cd08273         190 RT---KDWLPA--MLTPGGVDVVFDGVGGES-YEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLP  262 (331)
T ss_pred             CC---cchhhh--hccCCCceEEEECCchHH-HHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhccee
Confidence            43   344333  333348999999999887 88999999997 999999975322221221  1            111


Q ss_pred             HhcCcEEEEeeccCC----CccccHHHHHHHHHcCCcccceecc
Q 018022          320 LHSGKILMGSLFGGL----KAKSDIPILLKRYMDKWSYVPFSGT  359 (362)
Q Consensus       320 ~~~~~~i~g~~~~~~----~~~~~l~~~l~~~~~g~l~~~~~~~  359 (362)
                      +.++.++.+......    ...+.+++++++++++.+.+.+..+
T Consensus       263 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~  306 (331)
T cd08273         263 TGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPKIAKR  306 (331)
T ss_pred             ccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCCcceE
Confidence            222333333322110    0136788999999999998754443

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.97  E-value=2.5e-29  Score=236.05  Aligned_cols=285  Identities=25%  Similarity=0.382  Sum_probs=234.8

Q ss_pred             eeEEEeccCCCc--eEEEEeecCCCC-CCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCC
Q 018022           17 CRAAIATAPGEP--LVIDEVIVDPPN-SHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGV   92 (362)
Q Consensus        17 ~ka~~~~~~~~~--l~l~~~~~p~~~-~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~   92 (362)
                      |||+++..++..  +++.+.+ |.+. +++++||+.++++|++|+..+.+.... ...|.++|+|++|+|+.+|+++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~   79 (323)
T cd08241           1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF   79 (323)
T ss_pred             CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence            689998855433  7777777 7666 499999999999999999888776532 3447789999999999999999999


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCC
Q 018022           93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP  172 (362)
Q Consensus        93 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~  172 (362)
                      ++||+|+..+.                                                 .|+|++|+.++.+.++++|+
T Consensus        80 ~~G~~V~~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~ip~  110 (323)
T cd08241          80 KVGDRVVALTG-------------------------------------------------QGGFAEEVVVPAAAVFPLPD  110 (323)
T ss_pred             CCCCEEEEecC-------------------------------------------------CceeEEEEEcCHHHceeCCC
Confidence            99999985420                                                 13899999999999999999


Q ss_pred             CCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE
Q 018022          173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV  251 (362)
Q Consensus       173 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv  251 (362)
                      +++..+++.+.+.+.+||+++.....+.++++|+|+|+ |.+|++++++|+..|+ .|+++++++++.+.++++|++.++
T Consensus       111 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~  189 (323)
T cd08241         111 GLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVI  189 (323)
T ss_pred             CCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceee
Confidence            99998888888899999998777888999999999998 9999999999999999 799999999999999999998888


Q ss_pred             cCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEee
Q 018022          252 NSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL  330 (362)
Q Consensus       252 ~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~  330 (362)
                      +.+.   .++.+.+.+.+++ ++|.+++++|+.. +..++++++++ |+++.+|..... ...++....+.+++++.+..
T Consensus       190 ~~~~---~~~~~~i~~~~~~~~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  263 (323)
T cd08241         190 DYRD---PDLRERVKALTGGRGVDVVYDPVGGDV-FEASLRSLAWG-GRLLVIGFASGE-IPQIPANLLLLKNISVVGVY  263 (323)
T ss_pred             ecCC---ccHHHHHHHHcCCCCcEEEEECccHHH-HHHHHHhhccC-CEEEEEccCCCC-cCcCCHHHHhhcCcEEEEEe
Confidence            8776   6788888888777 8999999999854 88899999997 999999874322 11244445567899999987


Q ss_pred             ccCCCc------cccHHHHHHHHHcCCcccceec
Q 018022          331 FGGLKA------KSDIPILLKRYMDKWSYVPFSG  358 (362)
Q Consensus       331 ~~~~~~------~~~l~~~l~~~~~g~l~~~~~~  358 (362)
                      +..+..      .+.+++++++++++.+++....
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (323)
T cd08241         264 WGAYARREPELLRANLAELFDLLAEGKIRPHVSA  297 (323)
T ss_pred             cccccchhHHHHHHHHHHHHHHHHCCCcccccce
Confidence            654321      2567889999999988765433

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.97  E-value=2.5e-29  Score=234.85  Aligned_cols=278  Identities=21%  Similarity=0.260  Sum_probs=225.0

Q ss_pred             eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCC---CCCCCccccccceEEEEEeCCCCCC
Q 018022           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENVDG   91 (362)
Q Consensus        17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~---~~~~p~~~G~e~~G~Vv~vG~~v~~   91 (362)
                      |||+++..++..  +++++.+.|.++++||+||+.++++|++|+..+.+...   ...+|.++|||++|+|+++|++++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~   80 (309)
T cd05289           1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG   80 (309)
T ss_pred             CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence            789999887753  56778888888999999999999999999998877653   2345889999999999999999999


Q ss_pred             CCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 018022           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (362)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P  171 (362)
                      +++||+|+..+..                           ..                   .|+|++|+.++...++++|
T Consensus        81 ~~~G~~V~~~~~~---------------------------~~-------------------~g~~~~~~~~~~~~~~~~p  114 (309)
T cd05289          81 FKVGDEVFGMTPF---------------------------TR-------------------GGAYAEYVVVPADELALKP  114 (309)
T ss_pred             CCCCCEEEEccCC---------------------------CC-------------------CCcceeEEEecHHHhccCC
Confidence            9999999865321                           01                   1389999999999999999


Q ss_pred             CCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE
Q 018022          172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF  250 (362)
Q Consensus       172 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v  250 (362)
                      ++++...++.+.+.+.++|+++.....+.++++|+|+|+ |.+|++++++++..|+ +++++..++ +.+.++++|.+++
T Consensus       115 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~  192 (309)
T cd05289         115 ANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEV  192 (309)
T ss_pred             CCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEE
Confidence            999999999888899999998777777999999999997 9999999999999999 788887777 8888888998888


Q ss_pred             EcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 018022          251 VNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS  329 (362)
Q Consensus       251 v~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  329 (362)
                      ++.+.   .++.+    ...+ ++|.++|++|+.. ...++++++++ |+++.+|.... . ..    ....+++.+...
T Consensus       193 ~~~~~---~~~~~----~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~-~-~~----~~~~~~~~~~~~  257 (309)
T cd05289         193 IDYTK---GDFER----AAAPGGVDAVLDTVGGET-LARSLALVKPG-GRLVSIAGPPP-A-EQ----AAKRRGVRAGFV  257 (309)
T ss_pred             EeCCC---Cchhh----ccCCCCceEEEECCchHH-HHHHHHHHhcC-cEEEEEcCCCc-c-hh----hhhhccceEEEE
Confidence            87765   34433    3334 8999999999884 88999999997 99999987432 1 11    334457777666


Q ss_pred             eccCCCccccHHHHHHHHHcCCcccceecc
Q 018022          330 LFGGLKAKSDIPILLKRYMDKWSYVPFSGT  359 (362)
Q Consensus       330 ~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~  359 (362)
                      .+...  .+.+++++++++++.+++.+..+
T Consensus       258 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  285 (309)
T cd05289         258 FVEPD--GEQLAELAELVEAGKLRPVVDRV  285 (309)
T ss_pred             Eeccc--HHHHHHHHHHHHCCCEEEeeccE
Confidence            54322  57899999999999887654433

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08251 polyketide_synthase polyketide synthase

Probab=99.97  E-value=4.4e-29  Score=232.72  Aligned_cols=269  Identities=23%  Similarity=0.270  Sum_probs=217.7

Q ss_pred             cCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccC
Q 018022           36 VDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRS  114 (362)
Q Consensus        36 ~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~  114 (362)
                      .|.+.+++|+||+.++++|++|+..+.+..+. ..+|.++|+|++|+|+++|+++++|++||+|+....           
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-----------   70 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG-----------   70 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC-----------
Confidence            57789999999999999999999988876543 356889999999999999999999999999985421           


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHH
Q 018022          115 KKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW  194 (362)
Q Consensus       115 ~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~  194 (362)
                                       ..+                   |+|++|+.++.+.++++|++++.++++.+++.+.+||+++ 
T Consensus        71 -----------------~~~-------------------g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-  113 (303)
T cd08251          71 -----------------ESM-------------------GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-  113 (303)
T ss_pred             -----------------CCC-------------------cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-
Confidence                             011                   3899999999999999999999999999998999999986 


Q ss_pred             HhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC-C
Q 018022          195 RTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-G  272 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g  272 (362)
                      +...+++|++++|+|+ |.+|++++++++.+|+ +++++++++++.+.++++|++.+++...   .++.+.+..++++ +
T Consensus       114 ~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~  189 (303)
T cd08251         114 ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE---EDFEEEIMRLTGGRG  189 (303)
T ss_pred             HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHcCCCC
Confidence            6789999999999976 9999999999999999 8999999999999999999999998876   6788888888877 9


Q ss_pred             ccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCC------ccccHHHHHHH
Q 018022          273 ADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK------AKSDIPILLKR  346 (362)
Q Consensus       273 ~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~------~~~~l~~~l~~  346 (362)
                      +|+++|++++. .....+++++++ |+++.+|.........++...+. ++..+....+....      ..+.+.+++++
T Consensus       190 ~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (303)
T cd08251         190 VDVVINTLSGE-AIQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLS-NNQSFHSVDLRKLLLLDPEFIADYQAEMVSL  266 (303)
T ss_pred             ceEEEECCcHH-HHHHHHHHhccC-cEEEEEeccCCCccCccChhHhh-cCceEEEEehHHhhhhCHHHHHHHHHHHHHH
Confidence            99999999764 488899999997 99999986432222334443332 34444333221110      12457888999


Q ss_pred             HHcCCcccceecc
Q 018022          347 YMDKWSYVPFSGT  359 (362)
Q Consensus       347 ~~~g~l~~~~~~~  359 (362)
                      +++|.+++....+
T Consensus       267 ~~~g~~~~~~~~~  279 (303)
T cd08251         267 VEEGELRPTVSRI  279 (303)
T ss_pred             HHCCCccCCCceE
Confidence            9999988654443

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=5.1e-28  Score=229.24  Aligned_cols=287  Identities=21%  Similarity=0.291  Sum_probs=229.0

Q ss_pred             eEEEeccCCC--ceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCCC
Q 018022           18 RAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVE   94 (362)
Q Consensus        18 ka~~~~~~~~--~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~~   94 (362)
                      ||+++...+.  .+++++.+.|.|.+++|+||+.++++|++|...+.+.... ...|.++|+|++|+|+.+|+++.+|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~   80 (337)
T cd08275           1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV   80 (337)
T ss_pred             CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence            4666665553  2778788888889999999999999999999988776532 345788999999999999999999999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022           95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (362)
Q Consensus        95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l  174 (362)
                      ||+|+....                              +                   |+|++|+.++...++++|+++
T Consensus        81 G~~V~~~~~------------------------------~-------------------~~~~~~~~~~~~~~~~ip~~~  111 (337)
T cd08275          81 GDRVMGLTR------------------------------F-------------------GGYAEVVNVPADQVFPLPDGM  111 (337)
T ss_pred             CCEEEEecC------------------------------C-------------------CeeeeEEEecHHHeEECCCCC
Confidence            999985421                              1                   389999999999999999999


Q ss_pred             CccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHc-CCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFVN  252 (362)
Q Consensus       175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~g~~~vv~  252 (362)
                      +..+++.+.+.+.++|+++.+..+++++++|+|+|+ |.+|++++++|+.+ +. .++.. ..+++.+.++++|++.+++
T Consensus       112 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~  189 (337)
T cd08275         112 SFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVID  189 (337)
T ss_pred             CHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEee
Confidence            999999888899999998878889999999999998 99999999999998 33 33333 2356788888899988888


Q ss_pred             CCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCC---------------ccccCHH
Q 018022          253 SKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS---------------QLSLSSF  317 (362)
Q Consensus       253 ~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~---------------~~~~~~~  317 (362)
                      .+.   .++.+.++..+++++|+++|++|+.. ...++++++++ |+++.+|......               .+.+++.
T Consensus       190 ~~~---~~~~~~~~~~~~~~~d~v~~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (337)
T cd08275         190 YRT---QDYVEEVKKISPEGVDIVLDALGGED-TRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPM  264 (337)
T ss_pred             CCC---CcHHHHHHHHhCCCceEEEECCcHHH-HHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHH
Confidence            876   67888888777558999999999865 78899999997 9999998643211               1223335


Q ss_pred             HHHhcCcEEEEeeccCCCc-----cccHHHHHHHHHcCCcccceeccc
Q 018022          318 EVLHSGKILMGSLFGGLKA-----KSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       318 ~~~~~~~~i~g~~~~~~~~-----~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      .++.+++++.++.+.....     ...+.+++++++++.+++....+|
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (337)
T cd08275         265 KLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPKIDSVF  312 (337)
T ss_pred             HHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCceeeEE
Confidence            5677899999886543211     134778899999999887654443

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.96  E-value=3.9e-28  Score=224.15  Aligned_cols=260  Identities=22%  Similarity=0.213  Sum_probs=214.1

Q ss_pred             CeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCC
Q 018022           42 HEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCS  121 (362)
Q Consensus        42 ~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~  121 (362)
                      +||+||+.++++|++|.....+..  ..+|.++|+|++|+|+++|++++.|++||+|+...                   
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~-------------------   59 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA-------------------   59 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------
Confidence            589999999999999999887764  24578999999999999999999999999997532                   


Q ss_pred             CCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHhcCCCC
Q 018022          122 AFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV  201 (362)
Q Consensus       122 ~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~  201 (362)
                                                     .|+|++|+.++.+.++++|++++..+++.+.+++.++|.++.+..++++
T Consensus        60 -------------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~  108 (293)
T cd05195          60 -------------------------------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQK  108 (293)
T ss_pred             -------------------------------cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCC
Confidence                                           2489999999999999999999999999988899999998878889999


Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC--CcEEEcCCCCCCccHHHHHHhhcCC-CccEEE
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG--VTEFVNSKNCGDKSVSQIIIDMTDG-GADYCF  277 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g--~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vi  277 (362)
                      |++|+|+|+ |.+|++++++++.+|+ +++++++++++.+.+++++  ++.+++...   .++.+.+++.+.+ ++|.+|
T Consensus       109 g~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi  184 (293)
T cd05195         109 GESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRD---LSFADGILRATGGRGVDVVL  184 (293)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCc---hhHHHHHHHHhCCCCceEEE
Confidence            999999986 9999999999999999 8999998999999998888  678888766   6788888888877 899999


Q ss_pred             EcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCC------ccccHHHHHHHHHcCC
Q 018022          278 ECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK------AKSDIPILLKRYMDKW  351 (362)
Q Consensus       278 d~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~------~~~~l~~~l~~~~~g~  351 (362)
                      |++|+. .+..+++.++++ |+++.+|.........++... +.+++.+....+....      ..+.+.++++++++++
T Consensus       185 ~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (293)
T cd05195         185 NSLSGE-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRP-FLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGV  261 (293)
T ss_pred             eCCCch-HHHHHHHhcccC-ceEEEeeccccccCCccchhh-hccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCC
Confidence            999988 589999999997 999999875322112333332 3356776665433221      1245788999999999


Q ss_pred             cccceeccc
Q 018022          352 SYVPFSGTR  360 (362)
Q Consensus       352 l~~~~~~~~  360 (362)
                      +++....++
T Consensus       262 ~~~~~~~~~  270 (293)
T cd05195         262 LKPLPPTVV  270 (293)
T ss_pred             cccCCCeee
Confidence            887655443

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=1.1e-27  Score=225.24  Aligned_cols=273  Identities=22%  Similarity=0.224  Sum_probs=210.3

Q ss_pred             EEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC---CCCCccccccceEEEEEeCCCCCCCCCCCEEEeeCCCCC
Q 018022           30 VIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADC  106 (362)
Q Consensus        30 ~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~---~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~  106 (362)
                      ++++.+.|.+.++||+||+.++++|++|...+.|....   ...|..+|||++|+|+++|+++.+|++||+|+.....  
T Consensus        15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~--   92 (319)
T cd08267          15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP--   92 (319)
T ss_pred             ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence            77888999999999999999999999999988776521   2357789999999999999999999999999865321  


Q ss_pred             CCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccchhccccch
Q 018022          107 TECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV  186 (362)
Q Consensus       107 ~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~  186 (362)
                                               ..                   .|+|++|+.++.+.++++|++++.++++.+.+.+
T Consensus        93 -------------------------~~-------------------~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~  128 (319)
T cd08267          93 -------------------------KG-------------------GGALAEYVVAPESGLAKKPEGVSFEEAAALPVAG  128 (319)
T ss_pred             -------------------------CC-------------------CceeeEEEEechhheEECCCCCCHHHHHhhhhHH
Confidence                                     01                   1389999999999999999999999999999899


Q ss_pred             hhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHH
Q 018022          187 STGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQII  265 (362)
Q Consensus       187 ~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i  265 (362)
                      .+||+++.....++++++|+|+|+ |.+|++++++|+.+|+ +|++++++ ++.+.++++|.+++++.+.   .++.   
T Consensus       129 ~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~---  200 (319)
T cd08267         129 LTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT---EDFV---  200 (319)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC---CCcc---
Confidence            999998777777999999999998 9999999999999999 88888865 8888899999988888765   3333   


Q ss_pred             HhhcCC-CccEEEEcCCCH-HHHHHHHHHhccCCceEEEEccCCCCCcccc---CHHHHHhcCcEEEEeeccCCCccccH
Q 018022          266 IDMTDG-GADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGVDQPGSQLSL---SSFEVLHSGKILMGSLFGGLKAKSDI  340 (362)
Q Consensus       266 ~~~~~~-g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~---~~~~~~~~~~~i~g~~~~~~~~~~~l  340 (362)
                      ...+.+ ++|++++|+|+. ......+..++++ |+++.+|..........   .+..... ...+.......  ..+.+
T Consensus       201 ~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~  276 (319)
T cd08267         201 ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGG-GRRLKFFLAKP--NAEDL  276 (319)
T ss_pred             hhccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccc-cceEEEEEecC--CHHHH
Confidence            334444 899999999953 2234444459997 99999997532222221   1111111 22222222222  25789


Q ss_pred             HHHHHHHHcCCcccceeccc
Q 018022          341 PILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       341 ~~~l~~~~~g~l~~~~~~~~  360 (362)
                      ++++++++++++++.+..+|
T Consensus       277 ~~~~~~l~~~~~~~~~~~~~  296 (319)
T cd08267         277 EQLAELVEEGKLKPVIDSVY  296 (319)
T ss_pred             HHHHHHHHCCCeeeeeeeEE
Confidence            99999999999887655443

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>smart00829 PKS_ER Enoylreductase

Probab=99.96  E-value=1.9e-27  Score=219.52  Aligned_cols=251  Identities=21%  Similarity=0.252  Sum_probs=207.4

Q ss_pred             EEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCC
Q 018022           46 VRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPF  125 (362)
Q Consensus        46 Vkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~  125 (362)
                      ||+.++++|++|...+.+..+   .|.++|+|++|+|+++|+.++.|++||+|+...                       
T Consensus         2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~-----------------------   55 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA-----------------------   55 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------
Confidence            899999999999998877643   367899999999999999999999999997431                       


Q ss_pred             CCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEE
Q 018022          126 KISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTV  205 (362)
Q Consensus       126 ~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~v  205 (362)
                                                 .|+|++|+.++.++++++|+++++.+++.+.+.+.++|+++.+...+.+|++|
T Consensus        56 ---------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~v  108 (288)
T smart00829       56 ---------------------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESV  108 (288)
T ss_pred             ---------------------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEE
Confidence                                       24899999999999999999999999999999999999987788899999999


Q ss_pred             EEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC--cEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCC
Q 018022          206 VIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV--TEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVG  281 (362)
Q Consensus       206 lI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~--~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g  281 (362)
                      +|+|+ |.+|++++++++..|+ +|+++++++++.+.++++|+  +.++++.+   .++.+.+.+.+++ ++|.+||++|
T Consensus       109 lv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~  184 (288)
T smart00829      109 LIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD---LSFADEILRATGGRGVDVVLNSLA  184 (288)
T ss_pred             EEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC---ccHHHHHHHHhCCCCcEEEEeCCC
Confidence            99986 9999999999999999 89999999999999999998  77888766   6788888887776 8999999999


Q ss_pred             CHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCC-----ccccHHHHHHHHHcCCcccce
Q 018022          282 LASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK-----AKSDIPILLKRYMDKWSYVPF  356 (362)
Q Consensus       282 ~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-----~~~~l~~~l~~~~~g~l~~~~  356 (362)
                      + ..+...+++++++ |+++.+|.........+++.. +.+++++.+..+....     ..+.+.+++++++++++++..
T Consensus       185 ~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (288)
T smart00829      185 G-EFLDASLRCLAPG-GRFVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLP  261 (288)
T ss_pred             H-HHHHHHHHhccCC-cEEEEEcCcCCccccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcC
Confidence            6 4588899999997 999999974322223344433 3557777665443211     124577888999999887643

Enoylreductase in Polyketide synthases.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.94  E-value=9.4e-25  Score=194.96  Aligned_cols=283  Identities=19%  Similarity=0.165  Sum_probs=215.0

Q ss_pred             eeeEEEeccCC------CceEE--EEeecC-CCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccc----cceEE
Q 018022           16 QCRAAIATAPG------EPLVI--DEVIVD-PPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGH----EAIGV   81 (362)
Q Consensus        16 ~~ka~~~~~~~------~~l~l--~~~~~p-~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~----e~~G~   81 (362)
                      +-|++++...-      .+|.+  ++++++ .+++++||||.+|.+..|.-...+....+. .-.|+.||.    ..+|+
T Consensus         3 ~nkqvvLk~y~~g~P~~~d~~~~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~k   82 (343)
T KOG1196|consen    3 TNKQVILKNYVTGFPTESDFEFTTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAK   82 (343)
T ss_pred             cccEEEEeccCCCCCccccceeeeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEE
Confidence            34566665421      12444  344444 458999999999999987765444322211 112344443    67899


Q ss_pred             EEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEE
Q 018022           82 VESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTV  161 (362)
Q Consensus        82 Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~  161 (362)
                      |++.  +.++|++||.|....                                                    +|.||.+
T Consensus        83 Vi~S--~~~~~~~GD~v~g~~----------------------------------------------------gWeeysi  108 (343)
T KOG1196|consen   83 VIDS--GHPNYKKGDLVWGIV----------------------------------------------------GWEEYSV  108 (343)
T ss_pred             EEec--CCCCCCcCceEEEec----------------------------------------------------cceEEEE
Confidence            9996  457899999995221                                                    7999999


Q ss_pred             eecCc--eEEcCC--CCCccchh-ccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          162 LDIAH--VVKVDP--TVPPNRAC-LLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       162 v~~~~--~~~~P~--~l~~~~aa-~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      ++...  .+++|.  ++++.... ++.++..|||..+++...+++|++|+|-|| |.+|+.+.|+|+.+|+ .|+++..+
T Consensus       109 i~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS  187 (343)
T KOG1196|consen  109 ITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGS  187 (343)
T ss_pred             ecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCC
Confidence            97653  444444  45544433 467788999999999999999999999988 9999999999999999 99999999


Q ss_pred             chHHHHHHh-cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCC----CC
Q 018022          236 SEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP----GS  310 (362)
Q Consensus       236 ~~~~~~~~~-~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~----~~  310 (362)
                      ++|.++++. +|.+..+||++  +.++.++++...++|+|+-||.+|+.. +...+..|+.. |||+++|+-..    ..
T Consensus       188 ~EKv~ll~~~~G~d~afNYK~--e~~~~~aL~r~~P~GIDiYfeNVGG~~-lDavl~nM~~~-gri~~CG~ISqYN~~~~  263 (343)
T KOG1196|consen  188 KEKVDLLKTKFGFDDAFNYKE--ESDLSAALKRCFPEGIDIYFENVGGKM-LDAVLLNMNLH-GRIAVCGMISQYNLENP  263 (343)
T ss_pred             hhhhhhhHhccCCccceeccC--ccCHHHHHHHhCCCcceEEEeccCcHH-HHHHHHhhhhc-cceEeeeeehhccccCC
Confidence            999999875 79999999998  348889999988889999999999988 99999999997 99999998531    11


Q ss_pred             ccccCHHHHHhcCcEEEEeeccCCCc--cccHHHHHHHHHcCCccccee
Q 018022          311 QLSLSSFEVLHSGKILMGSLFGGLKA--KSDIPILLKRYMDKWSYVPFS  357 (362)
Q Consensus       311 ~~~~~~~~~~~~~~~i~g~~~~~~~~--~~~l~~~l~~~~~g~l~~~~~  357 (362)
                      +.--+...++.|++++.|+...++.+  .+.++.+..++++|||+..-+
T Consensus       264 ~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~ed  312 (343)
T KOG1196|consen  264 EGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVED  312 (343)
T ss_pred             ccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehh
Confidence            11224467888999999987766553  356788899999999987654

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.94  E-value=1.2e-24  Score=201.37  Aligned_cols=225  Identities=24%  Similarity=0.329  Sum_probs=182.4

Q ss_pred             CCCCccccccceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcee
Q 018022           68 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI  147 (362)
Q Consensus        68 ~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~  147 (362)
                      .++|.++|+|++|+|+++|+++++|++||+|+..                                              
T Consensus        18 ~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~----------------------------------------------   51 (277)
T cd08255          18 LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF----------------------------------------------   51 (277)
T ss_pred             CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec----------------------------------------------
Confidence            3489999999999999999999999999999742                                              


Q ss_pred             cccccccceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCC
Q 018022          148 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT  227 (362)
Q Consensus       148 ~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~  227 (362)
                            +.|++|+.++.+.++++|+++++++++.+ +.+.+||+++ ...+++++++++|+|+|.+|++++++|+.+|.+
T Consensus        52 ------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~  123 (277)
T cd08255          52 ------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAR  123 (277)
T ss_pred             ------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence                  16899999999999999999999998888 6899999986 578999999999998899999999999999994


Q ss_pred             EEEEEcCCchHHHHHHhcC-CcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEcc
Q 018022          228 RIIGVDVISEKFEIGKRFG-VTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       228 ~vi~~~~~~~~~~~~~~~g-~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      +|+++++++++.++++++| .+++++..+           ..+.+ ++|.+||+++....+...+++++++ |+++.+|.
T Consensus       124 ~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~~g~  191 (277)
T cd08255         124 EVVGVDPDAARRELAEALGPADPVAADTA-----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGW  191 (277)
T ss_pred             cEEEECCCHHHHHHHHHcCCCccccccch-----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEEEec
Confidence            4999999999999999999 555544322           11233 8999999999877789999999997 99999997


Q ss_pred             CCCCCccccCHHHHHhcCcEEEEeeccCCC---------ccccHHHHHHHHHcCCcccceeccc
Q 018022          306 DQPGSQLSLSSFEVLHSGKILMGSLFGGLK---------AKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~---------~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      .... . ......+..+.+++.+..+....         ..+.+++++++++++++++.+..+|
T Consensus       192 ~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~  253 (277)
T cd08255         192 YGLK-P-LLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEALITHRV  253 (277)
T ss_pred             cCCC-c-cccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCccccccCcc
Confidence            5432 2 22223455567788877654321         1267899999999999887655443

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.89  E-value=1.7e-23  Score=166.73  Aligned_cols=108  Identities=35%  Similarity=0.541  Sum_probs=96.5

Q ss_pred             CCeEEEEEeeeecchhhhhhhhcC-CCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCC
Q 018022           41 SHEVRVRIICTSLCHSDVTFWKMK-DFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNL  119 (362)
Q Consensus        41 ~~eVlVkv~~~~i~~~d~~~~~g~-~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~  119 (362)
                      |+||||||+++|||++|++++.+. .....+|.++|||++|+|+++|+++++|++||+|++.+...|+.|.+|..+..++
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~   80 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL   80 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence            789999999999999999999994 4557899999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEc
Q 018022          120 CSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV  170 (362)
Q Consensus       120 c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~  170 (362)
                      |++...   +|...+|                   +|+||+.+|++++++|
T Consensus        81 c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   81 CPNPEV---LGLGLDG-------------------GFAEYVVVPARNLVPV  109 (109)
T ss_dssp             TTTBEE---TTTSSTC-------------------SSBSEEEEEGGGEEEE
T ss_pred             CCCCCE---eEcCCCC-------------------cccCeEEEehHHEEEC
Confidence            988776   6666777                   9999999999999875

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.83  E-value=5.7e-20  Score=186.54  Aligned_cols=267  Identities=17%  Similarity=0.122  Sum_probs=214.7

Q ss_pred             eEEEEeecC---CCCCCeEEEEEeeeecchhhhhhhhcCCCCCC-------CCccccccceEEEEEeCCCCCCCCCCCEE
Q 018022           29 LVIDEVIVD---PPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV-------FPRILGHEAIGVVESVGENVDGVVEGDVV   98 (362)
Q Consensus        29 l~l~~~~~p---~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~-------~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V   98 (362)
                      |+..+-|..   +..++.=+--|-|+.||.+|+.+..|+.++..       ....+|-|++|+          .+-|.||
T Consensus      1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred             eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence            455554443   23566668899999999999999999876522       345788888876          5789999


Q ss_pred             EeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccc
Q 018022           99 IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR  178 (362)
Q Consensus        99 ~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~  178 (362)
                      ...                              --.                   -++++-+.++.+.+|.+|++-.+++
T Consensus      1499 M~m------------------------------vpA-------------------ksLATt~l~~rd~lWevP~~WTlee 1529 (2376)
T KOG1202|consen 1499 MGM------------------------------VPA-------------------KSLATTVLASRDFLWEVPSKWTLEE 1529 (2376)
T ss_pred             EEe------------------------------eeh-------------------hhhhhhhhcchhhhhhCCcccchhh
Confidence            632                              111                   1788999999999999999999999


Q ss_pred             hhccccchhhhHHHHHHhcCCCCCCEEEEEC-CChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcEEEcC
Q 018022          179 ACLLSCGVSTGVGAAWRTANVEVGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNS  253 (362)
Q Consensus       179 aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G-ag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~vv~~  253 (362)
                      |+..++.+.|+|++++.+...++|+++||++ +|++|++|+.+|.+.|+ +|+.+..+.||++++.+    +..+++-|+
T Consensus      1530 AstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NS 1608 (2376)
T KOG1202|consen 1530 ASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANS 1608 (2376)
T ss_pred             cccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccc
Confidence            9999999999999999999999999999995 59999999999999999 99999999999998875    344667788


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeecc
Q 018022          254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG  332 (362)
Q Consensus       254 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~  332 (362)
                      ++   .+|.+.+..-+.| |+|+|++...... ++..++||+.+ ||+..+|...-.++-++-+.- +.||.+++|..+.
T Consensus      1609 Rd---tsFEq~vl~~T~GrGVdlVLNSLaeEk-LQASiRCLa~~-GRFLEIGKfDLSqNspLGMav-fLkNvsfHGiLLD 1682 (2376)
T KOG1202|consen 1609 RD---TSFEQHVLWHTKGRGVDLVLNSLAEEK-LQASIRCLALH-GRFLEIGKFDLSQNSPLGMAV-FLKNVSFHGILLD 1682 (2376)
T ss_pred             cc---ccHHHHHHHHhcCCCeeeehhhhhHHH-HHHHHHHHHhc-CeeeeecceecccCCcchhhh-hhcccceeeeehh
Confidence            87   8999999999999 9999999998887 99999999997 999999976555555666554 4569999998776


Q ss_pred             CCCc--cccHHHHHHHHH----cCCcccceecccC
Q 018022          333 GLKA--KSDIPILLKRYM----DKWSYVPFSGTRA  361 (362)
Q Consensus       333 ~~~~--~~~l~~~l~~~~----~g~l~~~~~~~~~  361 (362)
                      +...  -+++.++.++++    +|..+|-...+|.
T Consensus      1683 svmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~ 1717 (2376)
T KOG1202|consen 1683 SVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFH 1717 (2376)
T ss_pred             hhhcCcHHHHHHHHHHHHhhhccCceecccccccc
Confidence            5432  244566666655    4666676666654

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.80  E-value=8.9e-19  Score=143.65  Aligned_cols=129  Identities=28%  Similarity=0.490  Sum_probs=119.3

Q ss_pred             hHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHH
Q 018022          212 SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAY  290 (362)
Q Consensus       212 ~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~  290 (362)
                      ++|++++|+|+++|+ +|++++++++|+++++++|+++++++++   .++.+.+++++++ ++|+||||+|.+..++.++
T Consensus         1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~---~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~   76 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD---DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAI   76 (130)
T ss_dssp             HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT---SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc---cccccccccccccccceEEEEecCcHHHHHHHH
Confidence            589999999999996 9999999999999999999999999988   7899999999998 9999999999888899999


Q ss_pred             HHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHHHc
Q 018022          291 ACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMD  349 (362)
Q Consensus       291 ~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~  349 (362)
                      ++++++ |+++++|.+. ....+++...++.+++++.|++.++   +++++++++++++
T Consensus        77 ~~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la~  130 (130)
T PF00107_consen   77 KLLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLAQ  130 (130)
T ss_dssp             HHEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH-
T ss_pred             HHhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhcC
Confidence            999998 9999999965 5678999999999999999998765   6999999999863

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.40  E-value=4.6e-12  Score=125.28  Aligned_cols=152  Identities=19%  Similarity=0.249  Sum_probs=113.9

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE-EcCCCCC----------CccHHHHHH
Q 018022          198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCG----------DKSVSQIII  266 (362)
Q Consensus       198 ~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v-v~~~~~~----------~~~~~~~i~  266 (362)
                      +..++++|+|+|+|++|+++++.|+.+|+ +|+++|.+++|++.++++|++.+ ++..+++          .+++.+..+
T Consensus       161 G~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~  239 (509)
T PRK09424        161 GKVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM  239 (509)
T ss_pred             CCcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence            35689999999999999999999999999 89999999999999999999854 6653310          013334433


Q ss_pred             hh-cC--CCccEEEEcCCCH-----HHH-HHHHHHhccCCceEEEEccCCCC-CccccCHHHHHh-cCcEEEEeeccCCC
Q 018022          267 DM-TD--GGADYCFECVGLA-----SLV-QEAYACCRKGWGKTIVLGVDQPG-SQLSLSSFEVLH-SGKILMGSLFGGLK  335 (362)
Q Consensus       267 ~~-~~--~g~d~vid~~g~~-----~~~-~~~~~~l~~~~G~iv~~G~~~~~-~~~~~~~~~~~~-~~~~i~g~~~~~~~  335 (362)
                      +. ..  +++|++|+|+|.+     ..+ ++.++.++++ |+++.+|...++ -..+++...++. +++++.|.+.  + 
T Consensus       240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n--~-  315 (509)
T PRK09424        240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD--L-  315 (509)
T ss_pred             HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCC--C-
Confidence            33 22  2799999999963     354 8999999998 999999985322 234555555665 8999999863  2 


Q ss_pred             ccccHH-HHHHHHHcCCcccc
Q 018022          336 AKSDIP-ILLKRYMDKWSYVP  355 (362)
Q Consensus       336 ~~~~l~-~~l~~~~~g~l~~~  355 (362)
                       +..+. ++.+++.++.+++.
T Consensus       316 -P~~~p~~As~lla~~~i~l~  335 (509)
T PRK09424        316 -PSRLPTQSSQLYGTNLVNLL  335 (509)
T ss_pred             -chhHHHHHHHHHHhCCccHH
Confidence             23455 58888888877654

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.28  E-value=1.2e-10  Score=112.63  Aligned_cols=141  Identities=14%  Similarity=0.160  Sum_probs=113.8

Q ss_pred             HHHHHHhcCC-CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhh
Q 018022          190 VGAAWRTANV-EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       190 ~~~l~~~~~~-~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~  268 (362)
                      |.++.+..++ -+|++|+|+|+|++|+.+++.++.+|+ +|++++.++.|++.++++|++.+ +        ..+.+   
T Consensus       189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~--------~~e~v---  255 (413)
T cd00401         189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T--------MEEAV---  255 (413)
T ss_pred             HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c--------HHHHH---
Confidence            4445454443 689999999999999999999999999 89999999999999999998532 1        11222   


Q ss_pred             cCCCccEEEEcCCCHHHHHHH-HHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCCccccHH--HHHH
Q 018022          269 TDGGADYCFECVGLASLVQEA-YACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIP--ILLK  345 (362)
Q Consensus       269 ~~~g~d~vid~~g~~~~~~~~-~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~--~~l~  345 (362)
                        .++|+||+|+|.+..+... ++.++++ |+++++|..    +.++++..+..+++++.+++.+..  ..+++  +.+.
T Consensus       256 --~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~----~~eId~~~L~~~el~i~g~~~~~~--~~~~~~g~aI~  326 (413)
T cd00401         256 --KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF----DVEIDVKGLKENAVEVVNIKPQVD--RYELPDGRRII  326 (413)
T ss_pred             --cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC----CCccCHHHHHhhccEEEEccCCcc--eEEcCCcchhh
Confidence              2589999999999888765 9999997 999999953    467888889999999999865432  23566  7999


Q ss_pred             HHHcCCc
Q 018022          346 RYMDKWS  352 (362)
Q Consensus       346 ~~~~g~l  352 (362)
                      ++++|++
T Consensus       327 LLa~Grl  333 (413)
T cd00401         327 LLAEGRL  333 (413)
T ss_pred             hhhCcCC
Confidence            9999998

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=98.55  E-value=1.7e-08  Score=82.09  Aligned_cols=98  Identities=19%  Similarity=0.290  Sum_probs=60.8

Q ss_pred             cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC--CHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhc
Q 018022          245 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG--LASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHS  322 (362)
Q Consensus       245 ~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g--~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~  322 (362)
                      +|+++|+|+++   .++      ...+++|+|||++|  ....+..++++| ++ |+++.+|.       .+.......+
T Consensus         1 LGAd~vidy~~---~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-------~~~~~~~~~~   62 (127)
T PF13602_consen    1 LGADEVIDYRD---TDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-------DLPSFARRLK   62 (127)
T ss_dssp             CT-SEEEETTC---SHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-------HHHHHHHHHH
T ss_pred             CCcCEEecCCC---ccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-------cccchhhhhc
Confidence            68999999987   665      22348999999999  655446777888 97 99999974       2222222222


Q ss_pred             CcEEEEeeccCCC----ccccHHHHHHHHHcCCcccceeccc
Q 018022          323 GKILMGSLFGGLK----AKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       323 ~~~i~g~~~~~~~----~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      ...+.+.++....    ..++++++++++++|+|+|+++++|
T Consensus        63 ~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f  104 (127)
T PF13602_consen   63 GRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPPIDRVF  104 (127)
T ss_dssp             CHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS---EEEEE
T ss_pred             ccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEeeccEE
Confidence            3333333332211    2356999999999999999999887

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.51  E-value=9.5e-07  Score=87.62  Aligned_cols=128  Identities=18%  Similarity=0.223  Sum_probs=90.1

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE-EcCCCCC----------CccHHHHHHhh
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCG----------DKSVSQIIIDM  268 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v-v~~~~~~----------~~~~~~~i~~~  268 (362)
                      .++++|+|+|+|.+|++++++++.+|+ .|++++++.++++.++++|.+.+ ++..++.          .+++.+...++
T Consensus       162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~  240 (511)
T TIGR00561       162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL  240 (511)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence            467999999999999999999999999 79999999999999999998763 3321100          02333333333


Q ss_pred             cC---CCccEEEEcC---CCHH---HHHHHHHHhccCCceEEEEccCCCCCccccC--HHHHH-hcCcEEEEee
Q 018022          269 TD---GGADYCFECV---GLAS---LVQEAYACCRKGWGKTIVLGVDQPGSQLSLS--SFEVL-HSGKILMGSL  330 (362)
Q Consensus       269 ~~---~g~d~vid~~---g~~~---~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~--~~~~~-~~~~~i~g~~  330 (362)
                      ..   .++|++|+|+   |.+.   ..++.++.|+++ +.|+.++...++ +++..  ...+. ..++++.|..
T Consensus       241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GG-n~E~t~p~~~~~~~~GV~~~gv~  312 (511)
T TIGR00561       241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGG-NCEYTKPGEVYTTENQVKVIGYT  312 (511)
T ss_pred             HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCC-CEEEecCceEEEecCCEEEEeeC
Confidence            33   2799999999   5432   457889999998 999999875443 33332  11111 2247777764

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.40  E-value=5.2e-06  Score=80.87  Aligned_cols=102  Identities=22%  Similarity=0.227  Sum_probs=80.1

Q ss_pred             hHHHHHHhcCCC-CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHh
Q 018022          189 GVGAAWRTANVE-VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIID  267 (362)
Q Consensus       189 a~~~l~~~~~~~-~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~  267 (362)
                      .|.++.+..++. .|++|+|+|.|.+|..+++.++.+|+ +|+++++++.|...+...|+. ++        ++.+.+. 
T Consensus       198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~--------~l~eal~-  266 (425)
T PRK05476        198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VM--------TMEEAAE-  266 (425)
T ss_pred             hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ec--------CHHHHHh-
Confidence            455554443554 89999999999999999999999999 999999999888777777764 22        1222221 


Q ss_pred             hcCCCccEEEEcCCCHHHHH-HHHHHhccCCceEEEEccC
Q 018022          268 MTDGGADYCFECVGLASLVQ-EAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       268 ~~~~g~d~vid~~g~~~~~~-~~~~~l~~~~G~iv~~G~~  306 (362)
                          ++|++|+++|....+. ..+..++++ +.++..|..
T Consensus       267 ----~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~  301 (425)
T PRK05476        267 ----LGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHF  301 (425)
T ss_pred             ----CCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCC
Confidence                5899999999988776 688899997 888898875

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.30  E-value=1.6e-05  Score=76.94  Aligned_cols=102  Identities=23%  Similarity=0.278  Sum_probs=79.3

Q ss_pred             hHHHHHHhcC-CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHh
Q 018022          189 GVGAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIID  267 (362)
Q Consensus       189 a~~~l~~~~~-~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~  267 (362)
                      .+.++.+..+ .-.|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.|...+...|+. +++        ..+.+  
T Consensus       181 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~--------leeal--  248 (406)
T TIGR00936       181 TIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT--------MEEAA--  248 (406)
T ss_pred             HHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC--------HHHHH--
Confidence            3344444434 3689999999999999999999999999 899999888887777777763 221        22222  


Q ss_pred             hcCCCccEEEEcCCCHHHHH-HHHHHhccCCceEEEEccC
Q 018022          268 MTDGGADYCFECVGLASLVQ-EAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       268 ~~~~g~d~vid~~g~~~~~~-~~~~~l~~~~G~iv~~G~~  306 (362)
                         .+.|++|+++|....+. ..+..++++ +.++.+|..
T Consensus       249 ---~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~  284 (406)
T TIGR00936       249 ---KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHF  284 (406)
T ss_pred             ---hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCC
Confidence               15799999999998776 488899997 899999874

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.30  E-value=3.9e-08  Score=96.38  Aligned_cols=159  Identities=18%  Similarity=0.181  Sum_probs=107.6

Q ss_pred             cccccceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeccccc
Q 018022           73 ILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVS  152 (362)
Q Consensus        73 ~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~  152 (362)
                      .-|.|+++-+.+|+++.++     +|+..+.+ |++|..|    ++.|.....   .|...++                 
T Consensus        89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~---~g~~l~~-----------------  138 (417)
T TIGR01035        89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKT---VGKVLER-----------------  138 (417)
T ss_pred             cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCC---chHHHHH-----------------
Confidence            4688999999999999876     66666777 9999999    666655554   3433334                 


Q ss_pred             ccceeeeEEeecCceEE---c-CCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCE
Q 018022          153 VSSFSEYTVLDIAHVVK---V-DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR  228 (362)
Q Consensus       153 ~g~~a~y~~v~~~~~~~---~-P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~  228 (362)
                        .|++++.++. .+..   + +..++...+|         .....+..+.-++++|+|+|+|.+|..+++.++..|+.+
T Consensus       139 --lf~~a~~~~k-~vr~~t~i~~~~vSv~~~A---------v~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~  206 (417)
T TIGR01035       139 --LFQKAFSVGK-RVRTETDISAGAVSISSAA---------VELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGK  206 (417)
T ss_pred             --HHHHHHHHhh-hhhhhcCCCCCCcCHHHHH---------HHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCE
Confidence              8888888765 3332   2 2223322221         111123334467899999999999999999999999769


Q ss_pred             EEEEcCCchHHH-HHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHH
Q 018022          229 IIGVDVISEKFE-IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS  284 (362)
Q Consensus       229 vi~~~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~  284 (362)
                      |++++++.++.+ +++++|.. .++.     .++.+.+.     ++|+||+|++.+.
T Consensus       207 V~v~~rs~~ra~~la~~~g~~-~i~~-----~~l~~~l~-----~aDvVi~aT~s~~  252 (417)
T TIGR01035       207 ILIANRTYERAEDLAKELGGE-AVKF-----EDLEEYLA-----EADIVISSTGAPH  252 (417)
T ss_pred             EEEEeCCHHHHHHHHHHcCCe-EeeH-----HHHHHHHh-----hCCEEEECCCCCC
Confidence            999999988855 66677754 2221     12223222     5999999999774

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.18  E-value=1.2e-05  Score=74.27  Aligned_cols=103  Identities=24%  Similarity=0.380  Sum_probs=72.6

Q ss_pred             hcCCCCCCEEEEECCChHHHHHHHHHHHcCCC-EEEEEcCCchHHHHHHhc----CCcEEEcCCCCCCccHHHHHHhhcC
Q 018022          196 TANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       196 ~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~~i~~~~~  270 (362)
                      .+.++++++||.+|+|. |..+.++++..+.. +|++++.+++.++.+++.    +...+- ...   .++. .+ .+.+
T Consensus        72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~---~d~~-~l-~~~~  144 (272)
T PRK11873         72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRL---GEIE-AL-PVAD  144 (272)
T ss_pred             hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEE---cchh-hC-CCCC
Confidence            35788999999999988 88888888887753 799999999999888763    433221 111   1111 11 1223


Q ss_pred             CCccEEEEcC------CCHHHHHHHHHHhccCCceEEEEccC
Q 018022          271 GGADYCFECV------GLASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       271 ~g~d~vid~~------g~~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      +.||+|+...      .....++.+++.|+++ |++++.+..
T Consensus       145 ~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~  185 (272)
T PRK11873        145 NSVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVV  185 (272)
T ss_pred             CceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEee
Confidence            3799998643      2346689999999998 999998764

>PLN02494 adenosylhomocysteinase

Probab=98.15  E-value=3.2e-05  Score=75.70  Aligned_cols=101  Identities=18%  Similarity=0.236  Sum_probs=80.1

Q ss_pred             HHHHHHhcCC-CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhh
Q 018022          190 VGAAWRTANV-EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       190 ~~~l~~~~~~-~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~  268 (362)
                      +.++.+..++ -.|++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+...|+.. +        .+.+.+.  
T Consensus       241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~v-v--------~leEal~--  308 (477)
T PLN02494        241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQV-L--------TLEDVVS--  308 (477)
T ss_pred             HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCee-c--------cHHHHHh--
Confidence            4445455444 679999999999999999999999999 8999999888877777777652 2        1222332  


Q ss_pred             cCCCccEEEEcCCCHHHH-HHHHHHhccCCceEEEEccC
Q 018022          269 TDGGADYCFECVGLASLV-QEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       269 ~~~g~d~vid~~g~~~~~-~~~~~~l~~~~G~iv~~G~~  306 (362)
                         ..|++++++|....+ ...++.|+++ +.++.+|..
T Consensus       309 ---~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~  343 (477)
T PLN02494        309 ---EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHF  343 (477)
T ss_pred             ---hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCC
Confidence               489999999988754 7899999997 999999974

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.12  E-value=5e-05  Score=71.07  Aligned_cols=111  Identities=18%  Similarity=0.237  Sum_probs=83.9

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .+.+++|+|.|.+|+.+++.++.+|+ +|++++++.++.+.++++|...+ ..     .++.    +... .+|+||+++
T Consensus       151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~-----~~l~----~~l~-~aDiVI~t~  218 (296)
T PRK08306        151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL-----SELA----EEVG-KIDIIFNTI  218 (296)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH-----HHHH----HHhC-CCCEEEECC
Confidence            68999999999999999999999999 99999999988888888886532 11     1222    2222 599999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEE
Q 018022          281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMG  328 (362)
Q Consensus       281 g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g  328 (362)
                      +........++.++++ +.++.++..+++.+  +  .....++++..+
T Consensus       219 p~~~i~~~~l~~~~~g-~vIIDla~~pggtd--~--~~a~~~Gv~~~~  261 (296)
T PRK08306        219 PALVLTKEVLSKMPPE-ALIIDLASKPGGTD--F--EYAEKRGIKALL  261 (296)
T ss_pred             ChhhhhHHHHHcCCCC-cEEEEEccCCCCcC--e--eehhhCCeEEEE
Confidence            8765456788899997 99999987655433  2  234445666664

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.10  E-value=1e-05  Score=76.24  Aligned_cols=109  Identities=20%  Similarity=0.246  Sum_probs=80.1

Q ss_pred             CceEEcCCCCCccchhccccchhhhHHHHHHhcCC---CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHH-H
Q 018022          165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANV---EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKF-E  240 (362)
Q Consensus       165 ~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~---~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~-~  240 (362)
                      ..++++|+.+..+.++... +.++++.++......   -++.+|+|+|+|.+|..+++.++..|..+|++++++.+|. +
T Consensus       139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~  217 (311)
T cd05213         139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE  217 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence            3577888888888887766 667777764332221   4789999999999999999999988877999999998875 6


Q ss_pred             HHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHH
Q 018022          241 IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASL  285 (362)
Q Consensus       241 ~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~  285 (362)
                      +++++|.. +++.     .++.+.+.     .+|+||.|++.+..
T Consensus       218 la~~~g~~-~~~~-----~~~~~~l~-----~aDvVi~at~~~~~  251 (311)
T cd05213         218 LAKELGGN-AVPL-----DELLELLN-----EADVVISATGAPHY  251 (311)
T ss_pred             HHHHcCCe-EEeH-----HHHHHHHh-----cCCEEEECCCCCch
Confidence            67788873 3322     12223322     48999999998864

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=98.03  E-value=1.5e-07  Score=92.41  Aligned_cols=161  Identities=18%  Similarity=0.164  Sum_probs=97.3

Q ss_pred             ccccccceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccc
Q 018022           72 RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFV  151 (362)
Q Consensus        72 ~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~  151 (362)
                      ..-|+|+++-+.+|+++.++.-+|+.     .. |++|.    ..+..|.....   .|...+                 
T Consensus        90 ~~~g~ea~~hl~~V~~GldS~V~GE~-----qI-lgQvk----~a~~~a~~~g~---~g~~l~-----------------  139 (423)
T PRK00045         90 VHEGEEAVRHLFRVASGLDSMVLGEP-----QI-LGQVK----DAYALAQEAGT---VGTILN-----------------  139 (423)
T ss_pred             hcCCHHHHHHHHHHHhhhhhhhcCCh-----HH-HHHHH----HHHHHHHHcCC---chHHHH-----------------
Confidence            34699999999999999887555543     33 44433    22223322221   111111                 


Q ss_pred             cccceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHhcC---CCCCCEEEEECCChHHHHHHHHHHHcCCCE
Q 018022          152 SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTAN---VEVGSTVVIFGLGSIGLAVAEGARLCGATR  228 (362)
Q Consensus       152 ~~g~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~---~~~g~~vlI~Gag~~G~~a~~la~~~g~~~  228 (362)
                        +.|++.+.++        +.+..+.+.. ..+.+.++.++.....   -.++.+|+|+|+|.+|.++++.++..|+++
T Consensus       140 --~lf~~a~~~~--------k~v~~~t~i~-~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~  208 (423)
T PRK00045        140 --RLFQKAFSVA--------KRVRTETGIG-AGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRK  208 (423)
T ss_pred             --HHHHHHHHHH--------hhHhhhcCCC-CCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCe
Confidence              1454444333        3332222222 2244555555432222   257899999999999999999999999889


Q ss_pred             EEEEcCCchHHH-HHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHH
Q 018022          229 IIGVDVISEKFE-IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS  284 (362)
Q Consensus       229 vi~~~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~  284 (362)
                      |++++++.++.+ +++++|.+ +++..     ++.+.+    . ++|+||+|+|.+.
T Consensus       209 V~v~~r~~~ra~~la~~~g~~-~~~~~-----~~~~~l----~-~aDvVI~aT~s~~  254 (423)
T PRK00045        209 ITVANRTLERAEELAEEFGGE-AIPLD-----ELPEAL----A-EADIVISSTGAPH  254 (423)
T ss_pred             EEEEeCCHHHHHHHHHHcCCc-EeeHH-----HHHHHh----c-cCCEEEECCCCCC
Confidence            999999988865 66777754 33221     122222    1 5899999999764

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=97.95  E-value=0.00019  Score=65.61  Aligned_cols=129  Identities=22%  Similarity=0.266  Sum_probs=83.9

Q ss_pred             ceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcC
Q 018022          155 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV  234 (362)
Q Consensus       155 ~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~  234 (362)
                      +|.+|.. +...++.+++++++..+. .+.... ....+.  ..+.++++||-+|+|. |..++.+++ .|..+|++++.
T Consensus        78 ~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi  150 (250)
T PRK00517         78 SWEDPPD-PDEINIELDPGMAFGTGT-HPTTRL-CLEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI  150 (250)
T ss_pred             CCcCCCC-CCeEEEEECCCCccCCCC-CHHHHH-HHHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence            4556644 667788899888776554 221111 111121  1256889999999987 877776554 57757999999


Q ss_pred             CchHHHHHHhc----CCcEEEcCCCCCCccHHHHHHhhcCC--CccEEEEcCCCH---HHHHHHHHHhccCCceEEEEcc
Q 018022          235 ISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDMTDG--GADYCFECVGLA---SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       235 ~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~~i~~~~~~--g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ++...+.+++.    +....+.               +..+  .||+|+......   ..++++.+.|+++ |++++.|.
T Consensus       151 s~~~l~~A~~n~~~~~~~~~~~---------------~~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi  214 (250)
T PRK00517        151 DPQAVEAARENAELNGVELNVY---------------LPQGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGI  214 (250)
T ss_pred             CHHHHHHHHHHHHHcCCCceEE---------------EccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEEC
Confidence            99988877652    2211111               1111  489998766543   3456888999998 99999886


Q ss_pred             C
Q 018022          306 D  306 (362)
Q Consensus       306 ~  306 (362)
                      .
T Consensus       215 ~  215 (250)
T PRK00517        215 L  215 (250)
T ss_pred             c
Confidence            4

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.83  E-value=0.00022  Score=70.15  Aligned_cols=92  Identities=21%  Similarity=0.255  Sum_probs=73.9

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      .-.|.+|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+.. +        ++.+.++     ..|+|+.
T Consensus       251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~-~--------~leell~-----~ADIVI~  315 (476)
T PTZ00075        251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV-V--------TLEDVVE-----TADIFVT  315 (476)
T ss_pred             CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee-c--------cHHHHHh-----cCCEEEE
Confidence            3478999999999999999999999999 8999988877775565566542 1        2333332     5899999


Q ss_pred             cCCCHHHHH-HHHHHhccCCceEEEEccC
Q 018022          279 CVGLASLVQ-EAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       279 ~~g~~~~~~-~~~~~l~~~~G~iv~~G~~  306 (362)
                      ++|....+. ..+..|+++ +.++.+|..
T Consensus       316 atGt~~iI~~e~~~~MKpG-AiLINvGr~  343 (476)
T PTZ00075        316 ATGNKDIITLEHMRRMKNN-AIVGNIGHF  343 (476)
T ss_pred             CCCcccccCHHHHhccCCC-cEEEEcCCC
Confidence            999888775 899999997 999999874

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.81  E-value=1.8e-05  Score=80.77  Aligned_cols=81  Identities=20%  Similarity=0.253  Sum_probs=60.0

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC---------------------chHHHHHHhcCCcEEEcCCCC
Q 018022          198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI---------------------SEKFEIGKRFGVTEFVNSKNC  256 (362)
Q Consensus       198 ~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~---------------------~~~~~~~~~~g~~~vv~~~~~  256 (362)
                      ..+.|++|+|+|+|++|+++++.++.+|+ +|++++..                     +.+++.++++|++..++....
T Consensus       133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~  211 (564)
T PRK12771        133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG  211 (564)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence            46789999999999999999999999999 78888853                     356777888998877764320


Q ss_pred             CCccHHHHHHhhcCCCccEEEEcCCCHH
Q 018022          257 GDKSVSQIIIDMTDGGADYCFECVGLAS  284 (362)
Q Consensus       257 ~~~~~~~~i~~~~~~g~d~vid~~g~~~  284 (362)
                      .+.. .+.+    ..++|+||+++|...
T Consensus       212 ~~~~-~~~~----~~~~D~Vi~AtG~~~  234 (564)
T PRK12771        212 EDIT-LEQL----EGEFDAVFVAIGAQL  234 (564)
T ss_pred             CcCC-HHHH----HhhCCEEEEeeCCCC
Confidence            0111 1222    126999999999763

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.78  E-value=0.00016  Score=69.77  Aligned_cols=99  Identities=20%  Similarity=0.224  Sum_probs=70.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      ++.+|+|+|+|.+|+.+++.++.+|+ +|++++++.++.+.+.. ++........+  .+++.+.+    . .+|++|++
T Consensus       166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~--~~~l~~~l----~-~aDvVI~a  237 (370)
T TIGR00518       166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN--AYEIEDAV----K-RADLLIGA  237 (370)
T ss_pred             CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC--HHHHHHHH----c-cCCEEEEc
Confidence            34569999999999999999999999 89999999888877654 55432222221  12222222    2 58999999


Q ss_pred             CC---C--HH-HHHHHHHHhccCCceEEEEccCCC
Q 018022          280 VG---L--AS-LVQEAYACCRKGWGKTIVLGVDQP  308 (362)
Q Consensus       280 ~g---~--~~-~~~~~~~~l~~~~G~iv~~G~~~~  308 (362)
                      ++   .  +. .....++.++++ +.++.++...+
T Consensus       238 ~~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~G  271 (370)
T TIGR00518       238 VLIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQG  271 (370)
T ss_pred             cccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCC
Confidence            83   2  22 136788889997 99999986543

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.76  E-value=0.00025  Score=66.01  Aligned_cols=110  Identities=17%  Similarity=0.206  Sum_probs=79.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .|.+++|+|.|.+|.+++..++.+|+ +|++.+++.++.+.+.++|... +..     .++.+.+    . .+|+||+++
T Consensus       150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~-~~~-----~~l~~~l----~-~aDiVint~  217 (287)
T TIGR02853       150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIP-FPL-----NKLEEKV----A-EIDIVINTI  217 (287)
T ss_pred             CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCee-ecH-----HHHHHHh----c-cCCEEEECC
Confidence            47899999999999999999999999 9999999988887777777542 211     1222222    2 599999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEE
Q 018022          281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM  327 (362)
Q Consensus       281 g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~  327 (362)
                      +....-...++.++++ ..++.++..++..    ++.....+++...
T Consensus       218 P~~ii~~~~l~~~k~~-aliIDlas~Pg~t----df~~Ak~~G~~a~  259 (287)
T TIGR02853       218 PALVLTADVLSKLPKH-AVIIDLASKPGGT----DFEYAKKRGIKAL  259 (287)
T ss_pred             ChHHhCHHHHhcCCCC-eEEEEeCcCCCCC----CHHHHHHCCCEEE
Confidence            8664335677888987 8888898754433    3344555566655

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK08324 short chain dehydrogenase; Validated

Probab=97.73  E-value=0.00031  Score=73.44  Aligned_cols=137  Identities=19%  Similarity=0.256  Sum_probs=87.8

Q ss_pred             ceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEc
Q 018022          155 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD  233 (362)
Q Consensus       155 ~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~  233 (362)
                      ++.+|..+++..++.+ +..+.+++.+...          ...+.-+|+++||+|+ |++|++.++.+...|+ +|++++
T Consensus       386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~  453 (681)
T PRK08324        386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD  453 (681)
T ss_pred             hcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence            5677888877766666 5555555542110          0122346789999997 9999999999999999 999999


Q ss_pred             CCchHHHHHHh-cCC---cE--EEcCCCCCCccHHHHHHhhc--CCCccEEEEcCCC-----------------------
Q 018022          234 VISEKFEIGKR-FGV---TE--FVNSKNCGDKSVSQIIIDMT--DGGADYCFECVGL-----------------------  282 (362)
Q Consensus       234 ~~~~~~~~~~~-~g~---~~--vv~~~~~~~~~~~~~i~~~~--~~g~d~vid~~g~-----------------------  282 (362)
                      ++.++++.+.+ ++.   ..  ..|-.+  ...+.+.+.+..  .+++|++|++.|.                       
T Consensus       454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd--~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~  531 (681)
T PRK08324        454 LDEEAAEAAAAELGGPDRALGVACDVTD--EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT  531 (681)
T ss_pred             CCHHHHHHHHHHHhccCcEEEEEecCCC--HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            99887765443 432   11  223322  133333333332  2379999999983                       


Q ss_pred             --HHHHHHHHHHhcc---CCceEEEEccC
Q 018022          283 --ASLVQEAYACCRK---GWGKTIVLGVD  306 (362)
Q Consensus       283 --~~~~~~~~~~l~~---~~G~iv~~G~~  306 (362)
                        ...++.+++.+++   + |++++++..
T Consensus       532 g~~~l~~~~~~~l~~~~~~-g~iV~vsS~  559 (681)
T PRK08324        532 GHFLVAREAVRIMKAQGLG-GSIVFIASK  559 (681)
T ss_pred             HHHHHHHHHHHHHHhcCCC-cEEEEECCc
Confidence              1224455666666   5 789999864

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.67  E-value=0.00044  Score=60.58  Aligned_cols=118  Identities=19%  Similarity=0.260  Sum_probs=83.6

Q ss_pred             CCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHH----HHhcCCc
Q 018022          173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI----GKRFGVT  248 (362)
Q Consensus       173 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~----~~~~g~~  248 (362)
                      .++....-.+.-+...|.  +.+...++++++||=+|+|. |..++-+|+..+  +|+.+++.++=.+.    ++.+|..
T Consensus        46 ~lpi~~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~  120 (209)
T COG2518          46 ALPIGCGQTISAPHMVAR--MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYE  120 (209)
T ss_pred             cccCCCCceecCcHHHHH--HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCC
Confidence            344444444444555554  45788999999999999876 999999999988  99999998874443    4567875


Q ss_pred             EEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 018022          249 EFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       249 ~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  303 (362)
                      .|.....++..       .+... .||.|+-+.+.+..-..+++.|+++ |+++.-
T Consensus       121 nV~v~~gDG~~-------G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~P  168 (209)
T COG2518         121 NVTVRHGDGSK-------GWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIP  168 (209)
T ss_pred             ceEEEECCccc-------CCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEE
Confidence            43322221111       22333 7999999999887557899999998 998865

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.54  E-value=0.00039  Score=64.85  Aligned_cols=97  Identities=20%  Similarity=0.257  Sum_probs=65.3

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc----CCcE-EEcCCCCCCccHHHHHHhhcCCCc
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVTE-FVNSKNCGDKSVSQIIIDMTDGGA  273 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~----g~~~-vv~~~~~~~~~~~~~i~~~~~~g~  273 (362)
                      ..++++||-+|+|. |..++.+++ .|..+|++++.++...+.+++.    +... +.....    +    ......++|
T Consensus       157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~----~----~~~~~~~~f  226 (288)
T TIGR00406       157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI----Y----LEQPIEGKA  226 (288)
T ss_pred             cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec----c----cccccCCCc
Confidence            45789999999988 777776665 5666999999999887777652    2211 111111    1    111223379


Q ss_pred             cEEEEcCCCH---HHHHHHHHHhccCCceEEEEccC
Q 018022          274 DYCFECVGLA---SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       274 d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      |+|+......   ..+..+.+.|+++ |.+++.|..
T Consensus       227 DlVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~  261 (288)
T TIGR00406       227 DVIVANILAEVIKELYPQFSRLVKPG-GWLILSGIL  261 (288)
T ss_pred             eEEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCc
Confidence            9999865443   3456788999998 999988763

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.47  E-value=0.00056  Score=56.27  Aligned_cols=96  Identities=24%  Similarity=0.240  Sum_probs=63.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCc--EEEcCCCCCCccHHHHHHhhcCCCccEE
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT--EFVNSKNCGDKSVSQIIIDMTDGGADYC  276 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~--~vv~~~~~~~~~~~~~i~~~~~~g~d~v  276 (362)
                      -.+.+++|+|+|++|.+++..+...|+++|+++.|+.+|.+.+. +++..  .++..++     +.+.+.     .+|++
T Consensus        10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~-----~~~~~~-----~~Div   79 (135)
T PF01488_consen   10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED-----LEEALQ-----EADIV   79 (135)
T ss_dssp             GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG-----HCHHHH-----TESEE
T ss_pred             cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH-----HHHHHh-----hCCeE
Confidence            35889999999999999999999999988999999999877654 46332  3444433     222222     59999


Q ss_pred             EEcCCCHHH--HHHHHHHhccCCceEEEEcc
Q 018022          277 FECVGLASL--VQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       277 id~~g~~~~--~~~~~~~l~~~~G~iv~~G~  305 (362)
                      |.|++.+..  ....+....+..+.++.++.
T Consensus        80 I~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~  110 (135)
T PF01488_consen   80 INATPSGMPIITEEMLKKASKKLRLVIDLAV  110 (135)
T ss_dssp             EE-SSTTSTSSTHHHHTTTCHHCSEEEES-S
T ss_pred             EEecCCCCcccCHHHHHHHHhhhhceecccc
Confidence            999997632  12333333221036677765

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.40  E-value=0.00086  Score=59.90  Aligned_cols=79  Identities=22%  Similarity=0.289  Sum_probs=60.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCC----cEEEcCCCCCCccHHHHHHhhcCC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGV----TEFVNSKNCGDKSVSQIIIDMTDG--G  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~----~~vv~~~~~~~~~~~~~i~~~~~~--g  272 (362)
                      .++.++|+|| +++|.+.++.....|+ +|+.+.|..+|++.+. +++.    ...+|-.+  .+.+...+..+...  .
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD--~~~~~~~i~~~~~~~g~   81 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD--RAAVEAAIEALPEEFGR   81 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC--HHHHHHHHHHHHHhhCc
Confidence            3478899999 9999999999999999 9999999999998765 5772    22444333  23445556555554  6


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|+.++..|.
T Consensus        82 iDiLvNNAGl   91 (246)
T COG4221          82 IDILVNNAGL   91 (246)
T ss_pred             ccEEEecCCC
Confidence            9999999885

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.38  E-value=0.0029  Score=58.18  Aligned_cols=77  Identities=21%  Similarity=0.346  Sum_probs=55.2

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE-EcCCCCCCccHHHHHHhhcC--CCccEEEE
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTD--GGADYCFE  278 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~i~~~~~--~g~d~vid  278 (362)
                      .++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+...+...+ .|..+  .+.+.+.+.+...  +++|++|+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~vi~   78 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND--GAALARLAEELEAEHGGLDVLIN   78 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEEEE
Confidence            37899998 9999999999999999 99999998888777766665433 34333  2333344433322  37999999


Q ss_pred             cCCC
Q 018022          279 CVGL  282 (362)
Q Consensus       279 ~~g~  282 (362)
                      +.|.
T Consensus        79 ~ag~   82 (274)
T PRK05693         79 NAGY   82 (274)
T ss_pred             CCCC
Confidence            9983

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.38  E-value=0.0028  Score=56.82  Aligned_cols=104  Identities=21%  Similarity=0.215  Sum_probs=67.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-Hhc---CCcEEEcCCCCCCccHHHHHHhhcC--CCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF---GVTEFVNSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~---g~~~vv~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      .+++|+|+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +++   +..+.+..+-.+.+.+.+.+.+...  +++
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   82 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI   82 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4679999998 9999999999999999 999999988877655 222   2223332221012233333333221  268


Q ss_pred             cEEEEcCCCH-----------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          274 DYCFECVGLA-----------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       274 d~vid~~g~~-----------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      |.++.+.|..                       ..++...+.++++ |++++++..
T Consensus        83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~  137 (238)
T PRK05786         83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSM  137 (238)
T ss_pred             CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecc
Confidence            9999988742                       1244556667776 899998864

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.32  E-value=0.004  Score=57.47  Aligned_cols=103  Identities=17%  Similarity=0.253  Sum_probs=69.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE-EcCCCCCCccHHHHHHhh---cCCCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDM---TDGGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~i~~~---~~~g~d~  275 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++++.+.+.+...+ .|-.+  .+++.+.+.+.   .++.+|+
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~~g~id~   79 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE--PESIAALVAQVLELSGGRLDA   79 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC--HHHHHHHHHHHHHHcCCCccE
Confidence            4578999998 9999999999888999 99999999988887777665433 23332  22333333332   3347999


Q ss_pred             EEEcCCCH-------------------------HHHHHHHHHhccC-CceEEEEccC
Q 018022          276 CFECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGVD  306 (362)
Q Consensus       276 vid~~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~~  306 (362)
                      +|.+.|..                         ...+.++..++.. .|+|++++..
T Consensus        80 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~  136 (277)
T PRK05993         80 LFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSI  136 (277)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECCh
Confidence            99987732                         0133455666542 2789988754

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=97.31  E-value=0.0028  Score=53.40  Aligned_cols=104  Identities=17%  Similarity=0.249  Sum_probs=70.2

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      .-.|.+++|.|-|.+|...++.++.+|+ +|++++.++-+.-.+..-|+.. .        .+.+.+.     ..|++|.
T Consensus        20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v-~--------~~~~a~~-----~adi~vt   84 (162)
T PF00670_consen   20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEV-M--------TLEEALR-----DADIFVT   84 (162)
T ss_dssp             --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EE-E---------HHHHTT-----T-SEEEE
T ss_pred             eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEe-c--------CHHHHHh-----hCCEEEE
Confidence            4578899999999999999999999999 9999999998877777777642 1        2222222     4899999


Q ss_pred             cCCCHHHH-HHHHHHhccCCceEEEEccCCCCCccccCHHHHHhc
Q 018022          279 CVGLASLV-QEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHS  322 (362)
Q Consensus       279 ~~g~~~~~-~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~  322 (362)
                      ++|....+ .+-+..|+++ ..+..+|.    .+.++++..+...
T Consensus        85 aTG~~~vi~~e~~~~mkdg-ail~n~Gh----~d~Eid~~~L~~~  124 (162)
T PF00670_consen   85 ATGNKDVITGEHFRQMKDG-AILANAGH----FDVEIDVDALEAN  124 (162)
T ss_dssp             -SSSSSSB-HHHHHHS-TT-EEEEESSS----STTSBTHHHHHTC
T ss_pred             CCCCccccCHHHHHHhcCC-eEEeccCc----CceeEeecccccc
Confidence            99988744 4788889996 55555554    3557777666554

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK06182 short chain dehydrogenase; Validated

Probab=97.31  E-value=0.003  Score=58.06  Aligned_cols=79  Identities=19%  Similarity=0.278  Sum_probs=55.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE-EcCCCCCCccHHHHHHhhc--CCCccEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMT--DGGADYC  276 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~i~~~~--~~g~d~v  276 (362)
                      .+.+++|+|+ |.+|.+.++.+...|+ +|++++++.++++.+...+...+ .|-.+  .+++.+.+.+..  .+++|++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~~~id~l   78 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD--EASIKAAVDTIIAEEGRIDVL   78 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEE
Confidence            3578999998 9999999999988999 99999999888776655554332 23322  233434444332  2379999


Q ss_pred             EEcCCC
Q 018022          277 FECVGL  282 (362)
Q Consensus       277 id~~g~  282 (362)
                      |.+.|.
T Consensus        79 i~~ag~   84 (273)
T PRK06182         79 VNNAGY   84 (273)
T ss_pred             EECCCc
Confidence            999984

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.27  E-value=0.0076  Score=55.11  Aligned_cols=81  Identities=23%  Similarity=0.313  Sum_probs=56.8

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c----CCc-EEEcCCCCCCccHHHHHH-hhc-C
Q 018022          200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GVT-EFVNSKNCGDKSVSQIII-DMT-D  270 (362)
Q Consensus       200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~----g~~-~vv~~~~~~~~~~~~~i~-~~~-~  270 (362)
                      ..+.++||+|| +++|...+..+...|+ .++.+.|+.+|++.+.+ +    +.. +++.-+= .+.+-.+.+. ++. .
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DL-s~~~~~~~l~~~l~~~   81 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADL-SDPEALERLEDELKER   81 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcC-CChhHHHHHHHHHHhc
Confidence            46789999999 9999999999999999 99999999999877643 2    322 2332211 1123333333 332 2


Q ss_pred             C-CccEEEEcCCC
Q 018022          271 G-GADYCFECVGL  282 (362)
Q Consensus       271 ~-g~d~vid~~g~  282 (362)
                      + .+|+.|++.|-
T Consensus        82 ~~~IdvLVNNAG~   94 (265)
T COG0300          82 GGPIDVLVNNAGF   94 (265)
T ss_pred             CCcccEEEECCCc
Confidence            2 79999999995

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.25  E-value=0.0039  Score=53.59  Aligned_cols=102  Identities=22%  Similarity=0.329  Sum_probs=73.4

Q ss_pred             HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE--EEcCCCCCCccHHHHHHh
Q 018022          194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE--FVNSKNCGDKSVSQIIID  267 (362)
Q Consensus       194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~--vv~~~~~~~~~~~~~i~~  267 (362)
                      .....+++|+.++=+|+|. |..++++++.....+||++++++++++..+    +||.+.  ++.-+.      .+.+.+
T Consensus        27 ls~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~A------p~~L~~   99 (187)
T COG2242          27 LSKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDA------PEALPD   99 (187)
T ss_pred             HHhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccc------hHhhcC
Confidence            3567889999888889865 666777775554459999999999988764    588764  443322      333333


Q ss_pred             hcCCCccEEEEcCCCH--HHHHHHHHHhccCCceEEEEcc
Q 018022          268 MTDGGADYCFECVGLA--SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       268 ~~~~g~d~vid~~g~~--~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      +.  .+|.+|---|..  ..++.++..|+++ |++|.-..
T Consensus       100 ~~--~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nai  136 (187)
T COG2242         100 LP--SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAI  136 (187)
T ss_pred             CC--CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEee
Confidence            22  599999866643  5578899999998 99997765

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.22  E-value=0.0027  Score=55.44  Aligned_cols=113  Identities=19%  Similarity=0.179  Sum_probs=76.5

Q ss_pred             CCCCEEEEECC--ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCc-EEEcCCC-CCCccHHHHHHhhcCCCcc
Q 018022          200 EVGSTVVIFGL--GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EFVNSKN-CGDKSVSQIIIDMTDGGAD  274 (362)
Q Consensus       200 ~~g~~vlI~Ga--g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~-~vv~~~~-~~~~~~~~~i~~~~~~g~d  274 (362)
                      .....|||+|+  |++|.+.+.=....|+ .|+++.|.-++..-+. ++|.. .=+|-.+ +.--.+...+++...|+.|
T Consensus         5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld   83 (289)
T KOG1209|consen    5 SQPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLD   83 (289)
T ss_pred             cCCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceE
Confidence            34568999975  9999999988889999 9999999999887766 78853 3334332 0112244455666677899


Q ss_pred             EEEEcCCCH----------HHHH----------------HHHHHhccCCceEEEEccCCCCCcccc
Q 018022          275 YCFECVGLA----------SLVQ----------------EAYACCRKGWGKTIVLGVDQPGSQLSL  314 (362)
Q Consensus       275 ~vid~~g~~----------~~~~----------------~~~~~l~~~~G~iv~~G~~~~~~~~~~  314 (362)
                      +.++..|.+          ..++                -....++.. |+|+.+|...+..+.++
T Consensus        84 ~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK-GtIVnvgSl~~~vpfpf  148 (289)
T KOG1209|consen   84 LLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK-GTIVNVGSLAGVVPFPF  148 (289)
T ss_pred             EEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc-ceEEEecceeEEeccch
Confidence            999987764          1111                123456775 99999997654443333

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.15  E-value=0.0055  Score=53.79  Aligned_cols=102  Identities=21%  Similarity=0.410  Sum_probs=70.7

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHH----hcCC-cEEEcCCCCCCccHHHHHHhh
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGK----RFGV-TEFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~----~~g~-~~vv~~~~~~~~~~~~~i~~~  268 (362)
                      ...++.++++||-+|+|. |..++.+++..+. .+|++++.+++.++.++    .++. +.+....    .+..+.+...
T Consensus        34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~----~d~~~~l~~~  108 (198)
T PRK00377         34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK----GEAPEILFTI  108 (198)
T ss_pred             HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE----echhhhHhhc
Confidence            456889999999999988 8888899887643 38999999998887664    3562 3222111    1222223222


Q ss_pred             cCCCccEEEEcCCC---HHHHHHHHHHhccCCceEEEE
Q 018022          269 TDGGADYCFECVGL---ASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       269 ~~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~  303 (362)
                       .+.+|.||...+.   ...+..+.+.|+++ |+++..
T Consensus       109 -~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~  144 (198)
T PRK00377        109 -NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID  144 (198)
T ss_pred             -CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence             2379999986553   34577888999998 999864

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.13  E-value=0.006  Score=56.23  Aligned_cols=113  Identities=22%  Similarity=0.280  Sum_probs=73.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCcE-EE--cCCCCCCccHHHHHHhhc--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-FV--NSKNCGDKSVSQIIIDMT--D  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~~-vv--~~~~~~~~~~~~~i~~~~--~  270 (362)
                      .+.+|+|+|| +++|.+.+.-...+|+ +++.+.+..++++.+    ++.+..+ ++  .-+-.+.++..+.+.+..  -
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f   89 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF   89 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence            5789999999 9999998888888898 777777777776665    3444433 22  111101233444443332  2


Q ss_pred             CCccEEEEcCCCH-------------------------HHHHHHHHHhccCC-ceEEEEccCCCCCcccc
Q 018022          271 GGADYCFECVGLA-------------------------SLVQEAYACCRKGW-GKTIVLGVDQPGSQLSL  314 (362)
Q Consensus       271 ~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~~-G~iv~~G~~~~~~~~~~  314 (362)
                      |++|+.++..|..                         .....++..|++.+ |+|+.++...+...++.
T Consensus        90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~  159 (282)
T KOG1205|consen   90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPF  159 (282)
T ss_pred             CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCc
Confidence            3799999988853                         24567788888876 89999987655555544

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.08  E-value=0.0044  Score=53.51  Aligned_cols=90  Identities=31%  Similarity=0.383  Sum_probs=65.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      -.|.+|.|+|.|.+|...++.++..|. +|++.+++..........+...         .++.+.+.+     .|+|+.+
T Consensus        34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~---------~~l~ell~~-----aDiv~~~   98 (178)
T PF02826_consen   34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY---------VSLDELLAQ-----ADIVSLH   98 (178)
T ss_dssp             STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE---------SSHHHHHHH------SEEEE-
T ss_pred             cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee---------eehhhhcch-----hhhhhhh
Confidence            358999999999999999999999999 9999999888776555555422         234444443     7899988


Q ss_pred             CCCH----HHH-HHHHHHhccCCceEEEEcc
Q 018022          280 VGLA----SLV-QEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       280 ~g~~----~~~-~~~~~~l~~~~G~iv~~G~  305 (362)
                      .+..    ..+ ...+..|+++ ..++.++.
T Consensus        99 ~plt~~T~~li~~~~l~~mk~g-a~lvN~aR  128 (178)
T PF02826_consen   99 LPLTPETRGLINAEFLAKMKPG-AVLVNVAR  128 (178)
T ss_dssp             SSSSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred             hccccccceeeeeeeeeccccc-eEEEeccc
Confidence            7742    112 4678888987 88888875

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.06  E-value=0.0066  Score=57.38  Aligned_cols=102  Identities=22%  Similarity=0.322  Sum_probs=72.7

Q ss_pred             HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHH----hcCCcEEEcCCCCCCccHHHHHHhh
Q 018022          194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~----~~g~~~vv~~~~~~~~~~~~~i~~~  268 (362)
                      .+...++++++||.+|+|. |..++.+++..+. ..|++++.+++..+.++    +.|.+.+....    .+..+.+.+.
T Consensus        73 l~~L~i~~g~~VLDIG~Gt-G~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~----gD~~~~~~~~  147 (322)
T PRK13943         73 MEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC----GDGYYGVPEF  147 (322)
T ss_pred             HHhcCCCCCCEEEEEeCCc-cHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe----CChhhccccc
Confidence            4566788999999999974 9999999998764 27999999998776654    35665433222    1222222111


Q ss_pred             cCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 018022          269 TDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       269 ~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  303 (362)
                        +.+|+|+.+.+........++.++++ |+++..
T Consensus       148 --~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~  179 (322)
T PRK13943        148 --APYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP  179 (322)
T ss_pred             --CCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence              26999999988777566889999997 998763

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=97.03  E-value=0.043  Score=51.31  Aligned_cols=138  Identities=10%  Similarity=0.091  Sum_probs=88.8

Q ss_pred             ceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHhcC---CCCCCEEEEECC-ChHHHHHHHHHH-HcCCCEE
Q 018022          155 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTAN---VEVGSTVVIFGL-GSIGLAVAEGAR-LCGATRI  229 (362)
Q Consensus       155 ~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~---~~~g~~vlI~Ga-g~~G~~a~~la~-~~g~~~v  229 (362)
                      .|-+|.++..+....  +.....++.+-+ .+.|.|. +.+-..   .-..+.|+|..| +.+++.++..++ ..+.-++
T Consensus        90 ~YN~Y~r~~~d~~y~--~~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~  165 (314)
T PF11017_consen   90 IYNQYLRVSADPAYD--PEREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV  165 (314)
T ss_pred             hhhceeecCCCcccC--cchhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence            456666665544331  112222333333 5667765 322222   233466777777 889998888888 5555599


Q ss_pred             EEEcCCchHHHHHHhcCC-cEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022          230 IGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       230 i~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      |++++ .......+++|. ++|+.|++         |.++.....-+++|..|+..+..++...++..--..+.+|..
T Consensus       166 vglTS-~~N~~Fve~lg~Yd~V~~Yd~---------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~t  233 (314)
T PF11017_consen  166 VGLTS-ARNVAFVESLGCYDEVLTYDD---------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGAT  233 (314)
T ss_pred             EEEec-CcchhhhhccCCceEEeehhh---------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEcc
Confidence            99985 555568889996 88888766         223322357899999999998888888888852346677764

>PRK06139 short chain dehydrogenase; Provisional

Probab=97.01  E-value=0.01  Score=56.47  Aligned_cols=79  Identities=27%  Similarity=0.354  Sum_probs=53.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCcE-EE--cCCCCCCccHHHHHHhhc--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-FV--NSKNCGDKSVSQIIIDMT--D  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~~-vv--~~~~~~~~~~~~~i~~~~--~  270 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++++.+    ++.|.+. ++  |-.+  .+++.+.+.+..  .
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d--~~~v~~~~~~~~~~~   82 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD--ADQVKALATQAASFG   82 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHhc
Confidence            4679999998 9999999999999999 899999998887543    3345432 22  3222  122222222221  2


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +++|++|++.|.
T Consensus        83 g~iD~lVnnAG~   94 (330)
T PRK06139         83 GRIDVWVNNVGV   94 (330)
T ss_pred             CCCCEEEECCCc
Confidence            379999999984

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=96.98  E-value=0.006  Score=59.25  Aligned_cols=107  Identities=18%  Similarity=0.251  Sum_probs=73.5

Q ss_pred             hhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHH
Q 018022          187 STGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIII  266 (362)
Q Consensus       187 ~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~  266 (362)
                      ...+..+.+..+++++++||-+|+|. |..+..+++..|+ +|++++.+++.++.+++.....-+....   .++.    
T Consensus       153 ~~k~~~l~~~l~l~~g~rVLDIGcG~-G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~---~D~~----  223 (383)
T PRK11705        153 EAKLDLICRKLQLKPGMRVLDIGCGW-GGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL---QDYR----  223 (383)
T ss_pred             HHHHHHHHHHhCCCCCCEEEEeCCCc-cHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE---Cchh----
Confidence            33444456778899999999999864 7777888888888 9999999999999887643211111111   1221    


Q ss_pred             hhcCCCccEEEEc-----CCC---HHHHHHHHHHhccCCceEEEEc
Q 018022          267 DMTDGGADYCFEC-----VGL---ASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       267 ~~~~~g~d~vid~-----~g~---~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      ++ .+.||.|+..     +|.   ...++.+.+.|+++ |++++..
T Consensus       224 ~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~  267 (383)
T PRK11705        224 DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT  267 (383)
T ss_pred             hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence            12 2469988743     343   24578889999998 9988753

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=96.94  E-value=0.0046  Score=53.78  Aligned_cols=77  Identities=21%  Similarity=0.253  Sum_probs=57.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC---cEEEcCCCCCCcc----HHHHHHhhcCCC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV---TEFVNSKNCGDKS----VSQIIIDMTDGG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~---~~vv~~~~~~~~~----~~~~i~~~~~~g  272 (362)
                      .|-+|||+|+ +++|++.++-....|= +||++.|++++++.++....   ..|.|-.+   .+    +.+.+.+-.+ .
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d---~~~~~~lvewLkk~~P-~   78 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVAD---RDSRRELVEWLKKEYP-N   78 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccc---hhhHHHHHHHHHhhCC-c
Confidence            4679999975 9999999999999998 99999999999999987543   34555443   33    3333332211 6


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      .+++|++.|-
T Consensus        79 lNvliNNAGI   88 (245)
T COG3967          79 LNVLINNAGI   88 (245)
T ss_pred             hheeeecccc
Confidence            8999998885

>PRK07109 short chain dehydrogenase; Provisional

Probab=96.92  E-value=0.013  Score=55.72  Aligned_cols=103  Identities=19%  Similarity=0.147  Sum_probs=66.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-E--EcCCCCCCccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-F--VNSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-v--v~~~~~~~~~~~~~i~~~~~--  270 (362)
                      .+.+++|+|+ |++|.+.++.+...|+ +|+++++++++++.+.    ..|... .  .|-.+  .+++.+.+.+...  
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d--~~~v~~~~~~~~~~~   83 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD--AEAVQAAADRAEEEL   83 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC--HHHHHHHHHHHHHHC
Confidence            4678999998 9999999999999999 8999999887765432    334432 2  23222  2333333333221  


Q ss_pred             CCccEEEEcCCCH-------------------------HHHHHHHHHhccC-CceEEEEccC
Q 018022          271 GGADYCFECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGVD  306 (362)
Q Consensus       271 ~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~~  306 (362)
                      +++|++|++.|..                         ...+.++..+++. .|+++.++..
T Consensus        84 g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~  145 (334)
T PRK07109         84 GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSA  145 (334)
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCCh
Confidence            3699999998842                         0123455566542 2889998764

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.90  E-value=0.014  Score=54.41  Aligned_cols=79  Identities=20%  Similarity=0.297  Sum_probs=54.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCC--cE-E--EcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV--TE-F--VNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~--~~-v--v~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ |++|++.++.+...|+ +|++++++.++++.+ +.++.  .. .  .|-.+  .+++.+.+.+...  +
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g   84 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD--LAAMQAAAEEAVERFG   84 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC--HHHHHHHHHHHHHHcC
Confidence            5789999998 9999999999999999 899999988877654 34442  11 1  23222  1233333333321  3


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|++.|.
T Consensus        85 ~id~vI~nAG~   95 (296)
T PRK05872         85 GIDVVVANAGI   95 (296)
T ss_pred             CCCEEEECCCc
Confidence            69999999985

>PRK07825 short chain dehydrogenase; Provisional

Probab=96.90  E-value=0.016  Score=53.15  Aligned_cols=78  Identities=23%  Similarity=0.233  Sum_probs=53.0

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCcEEE--cCCCCCCccHHHHHHhhcC--CCccE
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFV--NSKNCGDKSVSQIIIDMTD--GGADY  275 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~~vv--~~~~~~~~~~~~~i~~~~~--~g~d~  275 (362)
                      +.++||+|+ |++|...++.+...|+ +|+++++++++++.+ +.++..+++  |-.+  .+++.+.+.+...  +++|+
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~   81 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD--PASFAAFLDAVEADLGPIDV   81 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            578999998 9999999998888999 899999988877654 334422222  3322  2333333333321  37999


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|.+.|.
T Consensus        82 li~~ag~   88 (273)
T PRK07825         82 LVNNAGV   88 (273)
T ss_pred             EEECCCc
Confidence            9999884

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.89  E-value=0.025  Score=48.51  Aligned_cols=92  Identities=20%  Similarity=0.273  Sum_probs=64.5

Q ss_pred             EEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC-
Q 018022          205 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL-  282 (362)
Q Consensus       205 vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~-  282 (362)
                      |+|+|+ |.+|...++.+...|+ +|+++.|++++.+.  ..+++. +..+-   .+. +.+.+... ++|+||.++|. 
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~-~~~d~---~d~-~~~~~al~-~~d~vi~~~~~~   71 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEI-IQGDL---FDP-DSVKAALK-GADAVIHAAGPP   71 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEE-EESCT---TCH-HHHHHHHT-TSSEEEECCHST
T ss_pred             eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--cccccc-ceeee---hhh-hhhhhhhh-hcchhhhhhhhh
Confidence            789998 9999999999999998 99999999998877  444443 33222   222 33333333 69999999984 


Q ss_pred             ---HHHHHHHHHHhccCCc--eEEEEccC
Q 018022          283 ---ASLVQEAYACCRKGWG--KTIVLGVD  306 (362)
Q Consensus       283 ---~~~~~~~~~~l~~~~G--~iv~~G~~  306 (362)
                         ......+++.++.. |  +++.++..
T Consensus        72 ~~~~~~~~~~~~a~~~~-~~~~~v~~s~~   99 (183)
T PF13460_consen   72 PKDVDAAKNIIEAAKKA-GVKRVVYLSSA   99 (183)
T ss_dssp             TTHHHHHHHHHHHHHHT-TSSEEEEEEET
T ss_pred             ccccccccccccccccc-ccccceeeecc
Confidence               23355666666554 4  77777654

...

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=96.87  E-value=0.015  Score=58.81  Aligned_cols=106  Identities=13%  Similarity=0.130  Sum_probs=68.1

Q ss_pred             HhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c--------CC-----cEEEcCCCCCCc
Q 018022          195 RTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F--------GV-----TEFVNSKNCGDK  259 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~--------g~-----~~vv~~~~~~~~  259 (362)
                      ...+.+.|.++||+|+ |.+|...++.+...|+ +|+++.++.++.+.+.+ +        |.     ..++.-+-   .
T Consensus        73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDL---t  148 (576)
T PLN03209         73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDL---E  148 (576)
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecC---C
Confidence            4566778999999998 9999999999999999 99999999887754322 1        21     12222111   1


Q ss_pred             cHHHHHHhhcCCCccEEEEcCCCHH---------------HHHHHHHHhccC-CceEEEEccC
Q 018022          260 SVSQIIIDMTDGGADYCFECVGLAS---------------LVQEAYACCRKG-WGKTIVLGVD  306 (362)
Q Consensus       260 ~~~~~i~~~~~~g~d~vid~~g~~~---------------~~~~~~~~l~~~-~G~iv~~G~~  306 (362)
                      + .+.+.+..+ ++|+||.++|...               ....+++.+... .++||+++..
T Consensus       149 D-~esI~~aLg-giDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSi  209 (576)
T PLN03209        149 K-PDQIGPALG-NASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSL  209 (576)
T ss_pred             C-HHHHHHHhc-CCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccc
Confidence            1 223333333 6999999988531               123344444432 2689988764

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.84  E-value=0.016  Score=51.83  Aligned_cols=81  Identities=19%  Similarity=0.220  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcC---CcEEEcCCCCCCccHHHHHHhhcC--CCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG---VTEFVNSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g---~~~vv~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      .+.+++|+|+ |.+|...++.+...|+ +|++++++.++.+.+ +.+.   .-+++..+-.+..++.+.+.++..  +++
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999998 9999999988888899 899999988776544 3332   112222111012334444444321  269


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        84 d~vi~~ag~   92 (237)
T PRK07326         84 DVLIANAGV   92 (237)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK08265 short chain dehydrogenase; Provisional

Probab=96.83  E-value=0.018  Score=52.57  Aligned_cols=79  Identities=22%  Similarity=0.319  Sum_probs=53.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCc-EEE--cCCCCCCccHHHHHHhhcC--CCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~-~vv--~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      .+.+++|+|+ |.+|.+.++.+...|+ +|++++++.++.+.+ ++++.. .++  |-.+  .+++.+.+.+...  +.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i   81 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD--DAAIERAVATVVARFGRV   81 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence            4679999998 9999999999999999 999999988765544 344432 122  3222  2333333333321  368


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        82 d~lv~~ag~   90 (261)
T PRK08265         82 DILVNLACT   90 (261)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK12742 oxidoreductase; Provisional

Probab=96.83  E-value=0.028  Score=50.21  Aligned_cols=100  Identities=23%  Similarity=0.280  Sum_probs=62.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcC-CchHHHHH-HhcCCcEE-EcCCCCCCccHHHHHHhhcCCCccEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIG-KRFGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYC  276 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~-~~~~~~~~-~~~g~~~v-v~~~~~~~~~~~~~i~~~~~~g~d~v  276 (362)
                      .+.++||+|+ |.+|.+.++.+...|+ +|+.+.+ +.++.+.+ .+++...+ .|..+  .+.+.+.+.+.  +++|++
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~~--~~id~l   79 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD--RDAVIDVVRKS--GALDIL   79 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC--HHHHHHHHHHh--CCCcEE
Confidence            4679999998 9999999999999999 7776654 44444433 44555432 22222  12233333321  369999


Q ss_pred             EEcCCCHH-------------------------HHHHHHHHhccCCceEEEEccC
Q 018022          277 FECVGLAS-------------------------LVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       277 id~~g~~~-------------------------~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      |.+.|...                         ....+...++.+ |++++++..
T Consensus        80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~  133 (237)
T PRK12742         80 VVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG-GRIIIIGSV  133 (237)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC-CeEEEEecc
Confidence            99987520                         113444556676 899988764

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.81  E-value=0.019  Score=52.96  Aligned_cols=81  Identities=17%  Similarity=0.180  Sum_probs=50.2

Q ss_pred             CCCEEEEECC-C--hHHHHHHHHHHHcCCCEEEEEcCCchHHH---HH-HhcCCcEEEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKFE---IG-KRFGVTEFVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g--~~G~~a~~la~~~g~~~vi~~~~~~~~~~---~~-~~~g~~~vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ +  ++|.+.++.+...|+ +|+.++++++..+   .+ +++|....+..+-.+.+++.+.+.+...  +
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG   84 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            4678999998 4  899999999999999 8888887653322   22 3345333222211012233333333322  3


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      .+|++|++.|.
T Consensus        85 ~iD~lVnnAG~   95 (271)
T PRK06505         85 KLDFVVHAIGF   95 (271)
T ss_pred             CCCEEEECCcc
Confidence            79999999883

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.79  E-value=0.023  Score=51.17  Aligned_cols=81  Identities=20%  Similarity=0.210  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcC--C-cEEEcCCCCCCccHHHHHHhhcC--CCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG--V-TEFVNSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g--~-~~vv~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      .+.++||+|+ |.+|...++.+...|+ +|++++++.++.+.+. .+.  . ..++..+-.+.+++...+.+...  +.+
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   82 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV   82 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            3568999998 9999999999888999 7999999987765543 222  1 11222111012333333333311  268


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        83 d~vi~~ag~   91 (251)
T PRK07231         83 DILVNNAGT   91 (251)
T ss_pred             CEEEECCCC
Confidence            999999885

>TIGR00438 rrmJ cell division protein FtsJ

Probab=96.78  E-value=0.022  Score=49.41  Aligned_cols=102  Identities=19%  Similarity=0.161  Sum_probs=65.3

Q ss_pred             hcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE-EcCCCCCCccHHHHHHhhcCC-Cc
Q 018022          196 TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTDG-GA  273 (362)
Q Consensus       196 ~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~i~~~~~~-g~  273 (362)
                      ...+++|++||.+|+|+-+.......+..+..+|++++.++.+    ...++..+ .+..+   .+..+.+.+..+. ++
T Consensus        27 ~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~---~~~~~~l~~~~~~~~~   99 (188)
T TIGR00438        27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTD---EEVLNKIRERVGDDKV   99 (188)
T ss_pred             hcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCC---hhHHHHHHHHhCCCCc
Confidence            4557899999999998755544444444344489999998754    11233321 13222   3444555555555 89


Q ss_pred             cEEEEc-----CCC------------HHHHHHHHHHhccCCceEEEEcc
Q 018022          274 DYCFEC-----VGL------------ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       274 d~vid~-----~g~------------~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      |+|+..     .|.            ...+..+.+.|+++ |++++...
T Consensus       100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~~  147 (188)
T TIGR00438       100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKVF  147 (188)
T ss_pred             cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEEc
Confidence            999952     222            34577889999998 99998654

>PRK08339 short chain dehydrogenase; Provisional

Probab=96.77  E-value=0.038  Score=50.59  Aligned_cols=103  Identities=17%  Similarity=0.273  Sum_probs=66.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c----CCc-EEE--cCCCCCCccHHHHHHhhcC-
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GVT-EFV--NSKNCGDKSVSQIIIDMTD-  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~----g~~-~vv--~~~~~~~~~~~~~i~~~~~-  270 (362)
                      .+.++||+|+ +++|++.++.+...|+ +|++++++.++++.+.+ +    +.. ..+  |-.+  .+++.+.+.+... 
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~   83 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK--REDLERTVKELKNI   83 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHHHHhh
Confidence            4678999998 9999999999999999 89999998877655432 2    322 122  3222  2333333333321 


Q ss_pred             CCccEEEEcCCCH-------------------------HHHHHHHHHhccC-CceEEEEccC
Q 018022          271 GGADYCFECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGVD  306 (362)
Q Consensus       271 ~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~~  306 (362)
                      +++|+++.+.|..                         ...+.++..|+.. +|+|++++..
T Consensus        84 g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~  145 (263)
T PRK08339         84 GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSV  145 (263)
T ss_pred             CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCc
Confidence            3799999998852                         1134556666432 3799988764

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.75  E-value=0.025  Score=50.89  Aligned_cols=101  Identities=18%  Similarity=0.194  Sum_probs=62.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCch-HHHHH----HhcCCc-EEE--cCCCCCCccHHHHHHhhcC-
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-KFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~-~~~~~----~~~g~~-~vv--~~~~~~~~~~~~~i~~~~~-  270 (362)
                      .+.++||+|+ |.+|...+..+...|+ +|+++.++.+ +.+.+    +..+.. ..+  |..+  .+++.+.+.+... 
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   81 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD--EESVAALMDTAREE   81 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHh
Confidence            4678999998 9999999999888999 8888877653 33322    222322 122  3222  2333333333322 


Q ss_pred             -CCccEEEEcCCCH-------------------HHHHHHHHHhccCCceEEEEcc
Q 018022          271 -GGADYCFECVGLA-------------------SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       271 -~g~d~vid~~g~~-------------------~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                       +++|++|.+.|..                   ..++.+.+.+..+ |++++++.
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS  135 (248)
T PRK07806         82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS  135 (248)
T ss_pred             CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence             2689999887642                   2345566666665 89998865

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.74  E-value=0.0096  Score=53.02  Aligned_cols=77  Identities=14%  Similarity=0.177  Sum_probs=52.8

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE--cCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV--NSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv--~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      .+++|+|+ |.+|.+.+..+...|+ +|++++++.++.+.+++++-..++  |-.+  .+++.+.+..+..+++|++|.+
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~id~vi~~   78 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND--PASLDQLLQRLQGQRFDLLFVN   78 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC--HHHHHHHHHHhhcCCCCEEEEc
Confidence            46899998 9999999988888999 999999988777666554322222  2222  2333344444433479999998


Q ss_pred             CCC
Q 018022          280 VGL  282 (362)
Q Consensus       280 ~g~  282 (362)
                      .|.
T Consensus        79 ag~   81 (225)
T PRK08177         79 AGI   81 (225)
T ss_pred             Ccc
Confidence            764

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=96.74  E-value=0.0031  Score=55.91  Aligned_cols=103  Identities=21%  Similarity=0.326  Sum_probs=69.1

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCC-EEEEEcCCchHHHHHH----hcCCcE--EEcCCCCCCccHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGK----RFGVTE--FVNSKNCGDKSVSQII  265 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~-~vi~~~~~~~~~~~~~----~~g~~~--vv~~~~~~~~~~~~~i  265 (362)
                      +.+.+.+++|++||-+|+|. |+.++.+++..|.. +|+.++.+++-.+.++    .++.+.  ++..+.      ...+
T Consensus        64 ~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg------~~g~  136 (209)
T PF01135_consen   64 MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG------SEGW  136 (209)
T ss_dssp             HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G------GGTT
T ss_pred             HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch------hhcc
Confidence            45778899999999999876 88888888887743 7999998887665554    456543  232221      1111


Q ss_pred             HhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEE-Ecc
Q 018022          266 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV-LGV  305 (362)
Q Consensus       266 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~-~G~  305 (362)
                      .  ..++||.|+-+.+.+..-...++.|+++ |+++. ++.
T Consensus       137 ~--~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~pi~~  174 (209)
T PF01135_consen  137 P--EEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAPIGQ  174 (209)
T ss_dssp             G--GG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEEESS
T ss_pred             c--cCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEEEcc
Confidence            1  1127999999988877557899999998 99987 453

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK12939 short chain dehydrogenase; Provisional

Probab=96.74  E-value=0.026  Score=50.74  Aligned_cols=79  Identities=20%  Similarity=0.234  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEE--cCCCCCCccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv--~~~~~~~~~~~~~i~~~~~--  270 (362)
                      ++.+++|+|+ |.+|...+..+...|+ +|+++++++++.+.+.    ..+.. .++  |-.+  .+.+.+.+.+...  
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   82 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD--PASVQRFFDAAAAAL   82 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            4688999998 9999999999999999 8999988877655432    22322 222  3222  1222222222211  


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +++|++|.++|.
T Consensus        83 ~~id~vi~~ag~   94 (250)
T PRK12939         83 GGLDGLVNNAGI   94 (250)
T ss_pred             CCCCEEEECCCC
Confidence            379999999985

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.69  E-value=0.02  Score=55.18  Aligned_cols=96  Identities=16%  Similarity=0.162  Sum_probs=69.4

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC---C-cEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG---V-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g---~-~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      .+|||+|+|.+|+.+++.+.+.+-.+|++.+++.++...+....   . ...+|-.+      .+++.++.. ++|+||+
T Consensus         2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d------~~al~~li~-~~d~VIn   74 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD------VDALVALIK-DFDLVIN   74 (389)
T ss_pred             CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC------hHHHHHHHh-cCCEEEE
Confidence            47899999999999999999888459999999999888876653   2 23455444      233333332 3699999


Q ss_pred             cCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022          279 CVGLASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       279 ~~g~~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      +.+.....+.+-.+++.+ =.++....+
T Consensus        75 ~~p~~~~~~i~ka~i~~g-v~yvDts~~  101 (389)
T COG1748          75 AAPPFVDLTILKACIKTG-VDYVDTSYY  101 (389)
T ss_pred             eCCchhhHHHHHHHHHhC-CCEEEcccC
Confidence            999887665555667765 566666654

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.69  E-value=0.028  Score=51.28  Aligned_cols=104  Identities=15%  Similarity=0.242  Sum_probs=63.9

Q ss_pred             CCCEEEEECCC---hHHHHHHHHHHHcCCCEEEEEcCCchHH---HHH-HhcCCcEEEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGLG---SIGLAVAEGARLCGATRIIGVDVISEKF---EIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Gag---~~G~~a~~la~~~g~~~vi~~~~~~~~~---~~~-~~~g~~~vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|++   ++|.+.++.+...|+ +|+.++++++..   +.+ ++++...++.-+-.+.+++.+.+.+...  +
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   87 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG   87 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence            46899999873   899999999888999 888888875432   222 2334323332221112333333333321  3


Q ss_pred             CccEEEEcCCCH-----------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          272 GADYCFECVGLA-----------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       272 g~d~vid~~g~~-----------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      .+|++|.+.|..                             ...+.++..|+.+ |+|++++..
T Consensus        88 ~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-g~Ii~iss~  150 (258)
T PRK07533         88 RLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNG-GSLLTMSYY  150 (258)
T ss_pred             CCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccC-CEEEEEecc
Confidence            789999988731                             0134466677776 899888653

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.66  E-value=0.034  Score=51.34  Aligned_cols=102  Identities=17%  Similarity=0.229  Sum_probs=65.3

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHcCCCEEEEEcCCch---HHHHH-HhcCCcEEE--cCCCCCCccHHHHHHhhcC-
Q 018022          201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISE---KFEIG-KRFGVTEFV--NSKNCGDKSVSQIIIDMTD-  270 (362)
Q Consensus       201 ~g~~vlI~Ga---g~~G~~a~~la~~~g~~~vi~~~~~~~---~~~~~-~~~g~~~vv--~~~~~~~~~~~~~i~~~~~-  270 (362)
                      .+.++||+|+   +++|++.++.+...|+ +|+.++++++   +++.+ ++++....+  |-.+  .+.+.+.+.+... 
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~i~~~   80 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK--PEHFKSLAESLKKD   80 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC--HHHHHHHHHHHHHH
Confidence            3678999987   4899999999989999 8888888743   33322 344533322  3222  2333333333322 


Q ss_pred             -CCccEEEEcCCCH-----------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          271 -GGADYCFECVGLA-----------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       271 -~g~d~vid~~g~~-----------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                       +.+|++|.+.|..                             ...+..+..|..+ |+|++++..
T Consensus        81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~  145 (274)
T PRK08415         81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYL  145 (274)
T ss_pred             cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecC
Confidence             3799999998841                             1234566677786 999988754

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.66  E-value=0.038  Score=43.85  Aligned_cols=102  Identities=22%  Similarity=0.332  Sum_probs=69.5

Q ss_pred             HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcE--EEcCCCCCCccHHHHHHh
Q 018022          194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIIID  267 (362)
Q Consensus       194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~--vv~~~~~~~~~~~~~i~~  267 (362)
                      .....+.++++|+-+|+|. |..+..+++..+..++++++.++...+.+++    ++...  ++..+.   ...   +..
T Consensus        12 ~~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~---~~~---~~~   84 (124)
T TIGR02469        12 LSKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA---PEA---LED   84 (124)
T ss_pred             HHHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc---ccc---Chh
Confidence            4556777888999999977 8888888888754599999999988877643    44432  232221   110   111


Q ss_pred             hcCCCccEEEEcCCCH---HHHHHHHHHhccCCceEEEEc
Q 018022          268 MTDGGADYCFECVGLA---SLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       268 ~~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~G  304 (362)
                       ..+.+|+|+...+..   ..++.+.+.|+++ |++++..
T Consensus        85 -~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~  122 (124)
T TIGR02469        85 -SLPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLNA  122 (124)
T ss_pred             -hcCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEEe
Confidence             112799999765432   4578899999997 9988753

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.65  E-value=0.0068  Score=47.51  Aligned_cols=92  Identities=26%  Similarity=0.355  Sum_probs=62.4

Q ss_pred             CCCEEEEECCChHHHHHHHHHHH-cCCCEEEEEcCCchHHHHHHhc----CC-cE--EEcCCCCCCccHHHHHHhhcCCC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGKRF----GV-TE--FVNSKNCGDKSVSQIIIDMTDGG  272 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~-~g~~~vi~~~~~~~~~~~~~~~----g~-~~--vv~~~~~~~~~~~~~i~~~~~~g  272 (362)
                      |+.+||-+|+|. |..+..+++. .+. +|++++.+++-++.+++.    +. +.  ++.      .++ .... ...++
T Consensus         1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~------~d~-~~~~-~~~~~   70 (112)
T PF12847_consen    1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQ------GDA-EFDP-DFLEP   70 (112)
T ss_dssp             TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEE------SCC-HGGT-TTSSC
T ss_pred             CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE------Ccc-ccCc-ccCCC
Confidence            678999999876 7778888884 666 999999999988887652    22 21  222      122 1111 11227


Q ss_pred             ccEEEEcC-CCH---------HHHHHHHHHhccCCceEEEE
Q 018022          273 ADYCFECV-GLA---------SLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       273 ~d~vid~~-g~~---------~~~~~~~~~l~~~~G~iv~~  303 (362)
                      ||+|+... ...         ..++.+.+.|+++ |++++-
T Consensus        71 ~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi~  110 (112)
T PF12847_consen   71 FDLVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVIN  110 (112)
T ss_dssp             EEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CCEEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEEE
Confidence            99999977 221         2378899999997 998763

...

>PRK07576 short chain dehydrogenase; Provisional

Probab=96.64  E-value=0.043  Score=50.17  Aligned_cols=78  Identities=22%  Similarity=0.280  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEE--cCCCCCCccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv--~~~~~~~~~~~~~i~~~~~--  270 (362)
                      ++.++||+|+ |.+|...++.+...|+ +|+++++++++++.+.    +.+.. .++  |-.+  ..++.+.+.+...  
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~~   84 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD--YAAVEAAFAQIADEF   84 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            5789999998 9999999999989999 8999998877654332    22322 222  3222  2334444444322  


Q ss_pred             CCccEEEEcCC
Q 018022          271 GGADYCFECVG  281 (362)
Q Consensus       271 ~g~d~vid~~g  281 (362)
                      +++|++|.+.|
T Consensus        85 ~~iD~vi~~ag   95 (264)
T PRK07576         85 GPIDVLVSGAA   95 (264)
T ss_pred             CCCCEEEECCC
Confidence            26899998876

>PRK08017 oxidoreductase; Provisional

Probab=96.62  E-value=0.0082  Score=54.36  Aligned_cols=77  Identities=23%  Similarity=0.324  Sum_probs=55.1

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE-cCCCCCCccHHH---HHHhhcCCCccEEE
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV-NSKNCGDKSVSQ---IIIDMTDGGADYCF  277 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~---~i~~~~~~g~d~vi  277 (362)
                      +++||+|+ |.+|.+.++.+...|+ +|++++++.++++.+++.++..+. |..+  ...+.+   .+.+...+.+|.++
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~~~~~ii   79 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD--PESVERAADEVIALTDNRLYGLF   79 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC--HHHHHHHHHHHHHhcCCCCeEEE
Confidence            47999998 9999999999999999 899999999988888777765432 3322  122222   33332334789999


Q ss_pred             EcCCC
Q 018022          278 ECVGL  282 (362)
Q Consensus       278 d~~g~  282 (362)
                      .+.|.
T Consensus        80 ~~ag~   84 (256)
T PRK08017         80 NNAGF   84 (256)
T ss_pred             ECCCC
Confidence            88774

>PRK06180 short chain dehydrogenase; Provisional

Probab=96.62  E-value=0.034  Score=51.23  Aligned_cols=79  Identities=18%  Similarity=0.186  Sum_probs=53.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc--EEE--cCCCCCCccHHHHHHhhcC--CCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT--EFV--NSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~--~vv--~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      .+.++||+|+ |.+|.+.++.+...|+ +|++++++.++++.+.+....  ..+  |-.+  .+.+.+.+.+...  +++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~~~   79 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD--FDAIDAVVADAEATFGPI   79 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence            3578999998 9999999999888999 899999988887666543221  122  3222  1233333333222  268


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        80 d~vv~~ag~   88 (277)
T PRK06180         80 DVLVNNAGY   88 (277)
T ss_pred             CEEEECCCc
Confidence            999999886

>PRK04148 hypothetical protein; Provisional

Probab=96.60  E-value=0.014  Score=47.72  Aligned_cols=89  Identities=19%  Similarity=0.250  Sum_probs=62.5

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEE
Q 018022          198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCF  277 (362)
Q Consensus       198 ~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vi  277 (362)
                      ....+.+++++|.| .|...++.+..+|. .|+++|.+++..+.+++.+.+.+.+.--  +.++  .+    .+++|.+.
T Consensus        13 ~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf--~p~~--~~----y~~a~liy   82 (134)
T PRK04148         13 EKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF--NPNL--EI----YKNAKLIY   82 (134)
T ss_pred             ccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC--CCCH--HH----HhcCCEEE
Confidence            33456889999999 88766666668899 9999999999999999888766554322  1121  11    12689999


Q ss_pred             EcCCCHHHHHHHHHHhccC
Q 018022          278 ECVGLASLVQEAYACCRKG  296 (362)
Q Consensus       278 d~~g~~~~~~~~~~~l~~~  296 (362)
                      .+=..+.....+++.-+.-
T Consensus        83 sirpp~el~~~~~~la~~~  101 (134)
T PRK04148         83 SIRPPRDLQPFILELAKKI  101 (134)
T ss_pred             EeCCCHHHHHHHHHHHHHc
Confidence            9888887444555554443

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.60  E-value=0.031  Score=50.79  Aligned_cols=104  Identities=17%  Similarity=0.215  Sum_probs=63.9

Q ss_pred             CCCEEEEECCC---hHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc--EEEcCCCCCCccHHHHHHhhcC--CCc
Q 018022          201 VGSTVVIFGLG---SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT--EFVNSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       201 ~g~~vlI~Gag---~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      .+.+++|+|++   ++|.+.++.+...|+ +|+.++++++..+.++++...  ..+.-+-.+.++..+.+.+...  +.+
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI   84 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            57889999874   899999999989999 899888875444444444221  1221111012333333333321  369


Q ss_pred             cEEEEcCCCH-----------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          274 DYCFECVGLA-----------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       274 d~vid~~g~~-----------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      |++|.+.|..                             ...+.++..++.+ |+++.++..
T Consensus        85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~-g~Iv~iss~  145 (252)
T PRK06079         85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPG-ASIVTLTYF  145 (252)
T ss_pred             CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccC-ceEEEEecc
Confidence            9999988731                             1123445667776 899888754

>PRK12828 short chain dehydrogenase; Provisional

Probab=96.55  E-value=0.036  Score=49.30  Aligned_cols=79  Identities=18%  Similarity=0.161  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHH----HHhcCCcEE-EcCCCCCCccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI----GKRFGVTEF-VNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~----~~~~g~~~v-v~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      ++.++||+|+ |.+|..+++.+...|+ +|++++++.++.+.    ++..+...+ .|..+  .+++.+.+.+...  ++
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~   82 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD--PQAARRAVDEVNRQFGR   82 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC--HHHHHHHHHHHHHHhCC
Confidence            3679999998 9999999999988899 89999997765432    222333221 22222  2333333333221  27


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        83 ~d~vi~~ag~   92 (239)
T PRK12828         83 LDALVNIAGA   92 (239)
T ss_pred             cCEEEECCcc
Confidence            9999998874

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.54  E-value=0.021  Score=50.40  Aligned_cols=101  Identities=14%  Similarity=0.167  Sum_probs=68.8

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHh----cCCc---EEEcCCCCCCccHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQI  264 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~~~  264 (362)
                      +.+...++++++||-+|+|. |..+..+++..+ ..+|++++.+++-.+.+++    .+..   .++..+.      .+.
T Consensus        64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~------~~~  136 (205)
T PRK13944         64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDG------KRG  136 (205)
T ss_pred             HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCc------ccC
Confidence            34667788999999999866 777777777664 2389999999887666553    4432   2333221      111


Q ss_pred             HHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 018022          265 IIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       265 i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  303 (362)
                      +.  ..+.||+|+-+.......+.+.+.|+++ |++++.
T Consensus       137 ~~--~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~  172 (205)
T PRK13944        137 LE--KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP  172 (205)
T ss_pred             Cc--cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence            11  1137999998877666567888999998 998764

>PRK07063 short chain dehydrogenase; Provisional

Probab=96.54  E-value=0.047  Score=49.61  Aligned_cols=79  Identities=22%  Similarity=0.271  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hc-----CCc-EEE--cCCCCCCccHHHHHHhhcC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF-----GVT-EFV--NSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~-----g~~-~vv--~~~~~~~~~~~~~i~~~~~  270 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. ++     +.. .++  |-.+  ++++.+.+.+...
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~   82 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD--AASVAAAVAAAEE   82 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC--HHHHHHHHHHHHH
Confidence            4678999998 9999999999999999 8999998887765443 22     211 122  2222  2333343333321


Q ss_pred             --CCccEEEEcCCC
Q 018022          271 --GGADYCFECVGL  282 (362)
Q Consensus       271 --~g~d~vid~~g~  282 (362)
                        +.+|++|.+.|.
T Consensus        83 ~~g~id~li~~ag~   96 (260)
T PRK07063         83 AFGPLDVLVNNAGI   96 (260)
T ss_pred             HhCCCcEEEECCCc
Confidence              369999999884

>PRK07062 short chain dehydrogenase; Provisional

Probab=96.50  E-value=0.059  Score=49.08  Aligned_cols=79  Identities=22%  Similarity=0.260  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-----cCCcE--E--EcCCCCCCccHHHHHHhhcC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVTE--F--VNSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~g~~~--v--v~~~~~~~~~~~~~i~~~~~  270 (362)
                      .+.+++|+|+ +++|.+.++.+...|+ +|+.++++.++++.+.+     .+...  .  .|-.+  .+++.+.+.+...
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~   83 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD--EADVAAFAAAVEA   83 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC--HHHHHHHHHHHHH
Confidence            4678999998 9999999999999999 89999998877654322     11112  1  23222  2233333333322


Q ss_pred             --CCccEEEEcCCC
Q 018022          271 --GGADYCFECVGL  282 (362)
Q Consensus       271 --~g~d~vid~~g~  282 (362)
                        +.+|++|.+.|.
T Consensus        84 ~~g~id~li~~Ag~   97 (265)
T PRK07062         84 RFGGVDMLVNNAGQ   97 (265)
T ss_pred             hcCCCCEEEECCCC
Confidence              369999999984

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.48  E-value=0.015  Score=52.62  Aligned_cols=82  Identities=16%  Similarity=0.201  Sum_probs=53.9

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCC-cEEEcCCCCCCccHHHHHHhhc--CC
Q 018022          200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV-TEFVNSKNCGDKSVSQIIIDMT--DG  271 (362)
Q Consensus       200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~-~~vv~~~~~~~~~~~~~i~~~~--~~  271 (362)
                      -.+.+++|+|+ |.+|.+++..+...|+ +|++++++.++++.+.+    .+. ..++..+-...+++.+.+.++.  .+
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG   85 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            35789999998 9999999999999999 89999998887654432    121 1223222101233444443332  13


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      .+|++|.+.|.
T Consensus        86 ~~d~li~~ag~   96 (258)
T PRK06949         86 TIDILVNNSGV   96 (258)
T ss_pred             CCCEEEECCCC
Confidence            68999999984

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.48  E-value=0.014  Score=52.96  Aligned_cols=79  Identities=24%  Similarity=0.323  Sum_probs=53.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d~  275 (362)
                      .+.+|+|+|+ |.+|.+.++.+...|+ +|+++++++.+.+.+ .+++... ..|..+  +..+.+.+.+...  +++|+
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD--EDAVNALFDTAAETYGSVDI   82 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            4789999998 9999999999999999 899999887776544 3454322 223332  2233333333221  26899


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|.+.|.
T Consensus        83 vi~~ag~   89 (255)
T PRK06057         83 AFNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9998874

>PRK08267 short chain dehydrogenase; Provisional

Probab=96.48  E-value=0.035  Score=50.46  Aligned_cols=77  Identities=19%  Similarity=0.220  Sum_probs=52.8

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cC-C-cE--EEcCCCCCCccHHHHHHhhc---CCCc
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FG-V-TE--FVNSKNCGDKSVSQIIIDMT---DGGA  273 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g-~-~~--vv~~~~~~~~~~~~~i~~~~---~~g~  273 (362)
                      .++||+|+ |.+|...++.+...|+ +|++++++.++++.+.+ .+ . .+  ..|-.+  ..++.+.+.+..   .+++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~~~i   78 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD--RAAWDAALADFAAATGGRL   78 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence            47999998 9999999999888999 99999998887766543 32 1 12  223332  233444444332   3479


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        79 d~vi~~ag~   87 (260)
T PRK08267         79 DVLFNNAGI   87 (260)
T ss_pred             CEEEECCCC
Confidence            999999985

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.48  E-value=0.044  Score=54.39  Aligned_cols=79  Identities=25%  Similarity=0.413  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc--hHHH-HHHhcCCcE-EEcCCCCCCccHHHHHHhhc--CCCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS--EKFE-IGKRFGVTE-FVNSKNCGDKSVSQIIIDMT--DGGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~--~~~~-~~~~~g~~~-vv~~~~~~~~~~~~~i~~~~--~~g~  273 (362)
                      ++.++||+|+ |++|.+.++.+...|+ +|+++++..  ++++ ..++++... ..|-.+  ...+.+.+....  .+++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g~i  285 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA--PDAPARIAEHLAERHGGL  285 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC--HHHHHHHHHHHHHhCCCC
Confidence            5789999998 9999999999999999 888887743  2222 334455432 234333  122222222222  1269


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus       286 d~vi~~AG~  294 (450)
T PRK08261        286 DIVVHNAGI  294 (450)
T ss_pred             CEEEECCCc
Confidence            999999983

>PRK08589 short chain dehydrogenase; Validated

Probab=96.48  E-value=0.048  Score=50.11  Aligned_cols=78  Identities=24%  Similarity=0.354  Sum_probs=50.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHH-HHHh---cCCc-EE--EcCCCCCCccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE-IGKR---FGVT-EF--VNSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~-~~~~---~g~~-~v--v~~~~~~~~~~~~~i~~~~~--  270 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++ ++.+ .+++   .+.. .+  .|-.+  ++++.+.+.+...  
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   80 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISD--EQQVKDFASEIKEQF   80 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHHHc
Confidence            4679999998 9999999998888999 99999988 4433 2333   2321 12  23222  2333333333321  


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +.+|++|.+.|.
T Consensus        81 g~id~li~~Ag~   92 (272)
T PRK08589         81 GRVDVLFNNAGV   92 (272)
T ss_pred             CCcCEEEECCCC
Confidence            368999998874

>PRK08628 short chain dehydrogenase; Provisional

Probab=96.47  E-value=0.048  Score=49.47  Aligned_cols=81  Identities=19%  Similarity=0.175  Sum_probs=52.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc---CCc-EEEcCCCCCCccHHHHHHhhcC--CCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF---GVT-EFVNSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~---g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      .+.++||+|+ |.+|...++.+...|+ +++++++++++.+..+++   +.. .++..+-...+.+.+.+.+...  +++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI   84 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            3678999998 9999999988888999 788888888776444432   322 2222211012333333333322  378


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        85 d~vi~~ag~   93 (258)
T PRK08628         85 DGLVNNAGV   93 (258)
T ss_pred             CEEEECCcc
Confidence            999999984

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=96.47  E-value=0.081  Score=47.33  Aligned_cols=104  Identities=20%  Similarity=0.226  Sum_probs=62.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc------hHH--HH---------------HHhcCCcEEEcCCCCC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS------EKF--EI---------------GKRFGVTEFVNSKNCG  257 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~------~~~--~~---------------~~~~g~~~vv~~~~~~  257 (362)
                      ...+|+|.|.|++|.+++..+.+.|+.++..+|-++      .|+  .+               .++.+..--+...+  
T Consensus        29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~--  106 (263)
T COG1179          29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIN--  106 (263)
T ss_pred             hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehH--
Confidence            347899999999999999999999999988887543      121  11               11222211121111  


Q ss_pred             CccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022          258 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       258 ~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      .--..+.+.++...++|+||||...-..=-.++..+..++=.++..++.
T Consensus       107 ~f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Ga  155 (263)
T COG1179         107 DFITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGA  155 (263)
T ss_pred             hhhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccc
Confidence            0111234455555589999999987653334555455532455655543

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.46  E-value=0.014  Score=58.68  Aligned_cols=74  Identities=23%  Similarity=0.252  Sum_probs=56.2

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      +.++++|+|+|.|..|++++++++..|+ +|++.|.+.++.+.++++|+.. +....     ..+.+.     .+|+||.
T Consensus         9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~-~~~~~-----~~~~l~-----~~D~VV~   76 (488)
T PRK03369          9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVAT-VSTSD-----AVQQIA-----DYALVVT   76 (488)
T ss_pred             ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEE-EcCcc-----hHhHhh-----cCCEEEE
Confidence            4578999999999999999999999999 9999998777777677788743 32211     112221     4799999


Q ss_pred             cCCCHH
Q 018022          279 CVGLAS  284 (362)
Q Consensus       279 ~~g~~~  284 (362)
                      +.|.+.
T Consensus        77 SpGi~~   82 (488)
T PRK03369         77 SPGFRP   82 (488)
T ss_pred             CCCCCC
Confidence            999763

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.46  E-value=0.05  Score=49.68  Aligned_cols=79  Identities=23%  Similarity=0.269  Sum_probs=48.7

Q ss_pred             CCCEEEEECC-C--hHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCcEEE--cCCCCCCccHHHHHHhhcC-
Q 018022          201 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEFV--NSKNCGDKSVSQIIIDMTD-  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g--~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~~vv--~~~~~~~~~~~~~i~~~~~-  270 (362)
                      .+.++||+|+ +  ++|.+.++.+...|+ +|+.++++++..+.+    ++.|...++  |-.+  +++..+.+.+... 
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~--~~~v~~~~~~~~~~   83 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN--PKSISNLFDDIKEK   83 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC--HHHHHHHHHHHHHH
Confidence            4678999998 4  799999988888999 888887764222222    223433322  3222  2333334433322 


Q ss_pred             -CCccEEEEcCCC
Q 018022          271 -GGADYCFECVGL  282 (362)
Q Consensus       271 -~g~d~vid~~g~  282 (362)
                       +.+|+++.+.|.
T Consensus        84 ~g~iDilVnnag~   96 (260)
T PRK06603         84 WGSFDFLLHGMAF   96 (260)
T ss_pred             cCCccEEEEcccc
Confidence             369999998873

>PRK08263 short chain dehydrogenase; Provisional

Probab=96.44  E-value=0.043  Score=50.43  Aligned_cols=80  Identities=16%  Similarity=0.133  Sum_probs=51.6

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCc-EEEcCCCCCCccHHHHHHhhcC--CCccEE
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EFVNSKNCGDKSVSQIIIDMTD--GGADYC  276 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~d~v  276 (362)
                      +.++||+|+ |.+|...++.+...|+ +|++++++.++++.+.+ ++.. .++..+-.+.+.+.+.+.+...  +++|++
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV   81 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            457999998 9999999998888898 89999998887765543 2221 2222211012233333333221  378999


Q ss_pred             EEcCCC
Q 018022          277 FECVGL  282 (362)
Q Consensus       277 id~~g~  282 (362)
                      |.+.|.
T Consensus        82 i~~ag~   87 (275)
T PRK08263         82 VNNAGY   87 (275)
T ss_pred             EECCCC
Confidence            999885

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=96.43  E-value=0.053  Score=49.13  Aligned_cols=79  Identities=23%  Similarity=0.310  Sum_probs=52.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EE--cCCCCCCccHHHHHHhhc--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FV--NSKNCGDKSVSQIIIDMT--D  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv--~~~~~~~~~~~~~i~~~~--~  270 (362)
                      .+.++||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+.    +.|... .+  |-.+  .+++.+.+.+..  .
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   85 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD--HDAVRAAIDAFEAEI   85 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC--HHHHHHHHHHHHHhc
Confidence            4689999998 9999999998888899 8999998877654432    223221 22  3222  233333333332  1


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +.+|++|.+.|.
T Consensus        86 ~~~d~li~~ag~   97 (255)
T PRK07523         86 GPIDILVNNAGM   97 (255)
T ss_pred             CCCCEEEECCCC
Confidence            368999999985

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.42  E-value=0.018  Score=56.37  Aligned_cols=76  Identities=16%  Similarity=0.121  Sum_probs=55.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      -.+.+|+|+|+|.+|.+++..+...|+..++++.|+.+|.+.+ ++++...++.++         .+.+... .+|+||.
T Consensus       179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~---------~l~~~l~-~aDiVI~  248 (414)
T PRK13940        179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS---------ELPQLIK-KADIIIA  248 (414)
T ss_pred             ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH---------HHHHHhc-cCCEEEE
Confidence            4578999999999999999999999988999999998886554 456522333221         2222222 4999999


Q ss_pred             cCCCHHH
Q 018022          279 CVGLASL  285 (362)
Q Consensus       279 ~~g~~~~  285 (362)
                      |++.++.
T Consensus       249 aT~a~~~  255 (414)
T PRK13940        249 AVNVLEY  255 (414)
T ss_pred             CcCCCCe
Confidence            9998853

>PRK06500 short chain dehydrogenase; Provisional

Probab=96.42  E-value=0.061  Score=48.34  Aligned_cols=79  Identities=22%  Similarity=0.265  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCcE-EE--cCCCCCCccHHHHHHhhc--CCCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTE-FV--NSKNCGDKSVSQIIIDMT--DGGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~~-vv--~~~~~~~~~~~~~i~~~~--~~g~  273 (362)
                      ++.+++|+|+ |.+|.+.++.+...|+ +|++++++.++.+.+ ++++... .+  |..+  ..+..+.+....  .+++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i   81 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD--VAAQKALAQALAEAFGRL   81 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence            4678999998 9999999999999999 899999887766544 3455432 22  2222  122222222222  1368


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        82 d~vi~~ag~   90 (249)
T PRK06500         82 DAVFINAGV   90 (249)
T ss_pred             CEEEECCCC
Confidence            999999874

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=96.41  E-value=0.045  Score=45.92  Aligned_cols=81  Identities=26%  Similarity=0.270  Sum_probs=51.0

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC--chHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHhhc--CCC
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI--SEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMT--DGG  272 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~--~~~~~~~----~~~g~~-~vv~~~~~~~~~~~~~i~~~~--~~g  272 (362)
                      +++||+|+ +++|++.++.+...|..+|+.+.++  .++.+.+    +..+.. .++..+-...+++.+.+.+..  .+.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            36899998 9999999888888877688999988  4444333    333432 233222111233444444443  227


Q ss_pred             ccEEEEcCCCH
Q 018022          273 ADYCFECVGLA  283 (362)
Q Consensus       273 ~d~vid~~g~~  283 (362)
                      +|++|.+.|..
T Consensus        81 ld~li~~ag~~   91 (167)
T PF00106_consen   81 LDILINNAGIF   91 (167)
T ss_dssp             ESEEEEECSCT
T ss_pred             ccccccccccc
Confidence            99999998863

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06484 short chain dehydrogenase; Validated

Probab=96.41  E-value=0.048  Score=55.08  Aligned_cols=103  Identities=23%  Similarity=0.271  Sum_probs=69.1

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcE---EEcCCCCCCccHHHHHHhhcC--CC
Q 018022          200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTE---FVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~---vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      ..+.++||+|+ +++|++.++.+...|+ +|++++++.++++.+.+ .+...   ..|-.+  .+++.+.+.+...  +.
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~  343 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD--EAAVESAFAQIQARWGR  343 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC--HHHHHHHHHHHHHHcCC
Confidence            35788999998 9999999999999999 99999998888766554 44322   123222  2333333433322  36


Q ss_pred             ccEEEEcCCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          273 ADYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       273 ~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      +|++|.+.|..                          ...+.++..++.+ |+|++++..
T Consensus       344 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~  402 (520)
T PRK06484        344 LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSI  402 (520)
T ss_pred             CCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECch
Confidence            99999988742                          1133445666665 899998764

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=96.41  E-value=0.016  Score=53.58  Aligned_cols=98  Identities=18%  Similarity=0.229  Sum_probs=71.4

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc-CCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      +..+|.|+|.|.+|.-++.+|..+|+ +|...+.+.+|+..+..+ +.+.-.-+.+  +.++.+.+.     ++|++|.+
T Consensus       167 ~~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st--~~~iee~v~-----~aDlvIga  238 (371)
T COG0686         167 LPAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYST--PSNIEEAVK-----KADLVIGA  238 (371)
T ss_pred             CCccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcC--HHHHHHHhh-----hccEEEEE
Confidence            34567888999999999999999999 999999999999999874 4442222222  134444443     48998885


Q ss_pred             CCCH------HHHHHHHHHhccCCceEEEEccCC
Q 018022          280 VGLA------SLVQEAYACCRKGWGKTIVLGVDQ  307 (362)
Q Consensus       280 ~g~~------~~~~~~~~~l~~~~G~iv~~G~~~  307 (362)
                      +=.+      ...++..+.|+++ +.++.+....
T Consensus       239 VLIpgakaPkLvt~e~vk~MkpG-sVivDVAiDq  271 (371)
T COG0686         239 VLIPGAKAPKLVTREMVKQMKPG-SVIVDVAIDQ  271 (371)
T ss_pred             EEecCCCCceehhHHHHHhcCCC-cEEEEEEEcC
Confidence            4321      3467889999998 9999886543

>PRK06179 short chain dehydrogenase; Provisional

Probab=96.41  E-value=0.032  Score=51.03  Aligned_cols=76  Identities=22%  Similarity=0.288  Sum_probs=51.1

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccEEE
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADYCF  277 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d~vi  277 (362)
                      +.+++|+|+ |.+|...++.+...|+ +|++++++.++.+...  +... ..|-.+  .+++.+.+.+...  +.+|++|
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~d--~~~~~~~~~~~~~~~g~~d~li   78 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDVTD--DASVQAAVDEVIARAGRIDVLV   78 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeecCC--HHHHHHHHHHHHHhCCCCCEEE
Confidence            468999998 9999999998888999 8999998866554322  2222 223222  2344444444322  2689999


Q ss_pred             EcCCC
Q 018022          278 ECVGL  282 (362)
Q Consensus       278 d~~g~  282 (362)
                      .+.|.
T Consensus        79 ~~ag~   83 (270)
T PRK06179         79 NNAGV   83 (270)
T ss_pred             ECCCC
Confidence            99985

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.41  E-value=0.025  Score=50.72  Aligned_cols=77  Identities=19%  Similarity=0.328  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcEE-EcCCCCCCccHHHHHHhhcCCCccEEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYCF  277 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~v-v~~~~~~~~~~~~~i~~~~~~g~d~vi  277 (362)
                      .+.+++|+|+ |.+|...++.+...|+ +|++++++.++.+.+.+ .+...+ .|..+   .+..+.+.+. .+++|++|
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~-~~~~d~vi   82 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD---DAAIRAALAA-AGAFDGLV   82 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC---HHHHHHHHHH-hCCCCEEE
Confidence            4678999998 9999999999999999 89999998877765543 444322 23332   2222222221 13699999


Q ss_pred             EcCCC
Q 018022          278 ECVGL  282 (362)
Q Consensus       278 d~~g~  282 (362)
                      .+.|.
T Consensus        83 ~~ag~   87 (245)
T PRK07060         83 NCAGI   87 (245)
T ss_pred             ECCCC
Confidence            99984

>PRK08618 ornithine cyclodeaminase; Validated

Probab=96.40  E-value=0.066  Score=50.85  Aligned_cols=110  Identities=19%  Similarity=0.133  Sum_probs=73.3

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHH-HHcCCCEEEEEcCCchHHHHHH-h----cCCcEEEcCCCCCCccHHHHHHhhcCC
Q 018022          198 NVEVGSTVVIFGLGSIGLAVAEGA-RLCGATRIIGVDVISEKFEIGK-R----FGVTEFVNSKNCGDKSVSQIIIDMTDG  271 (362)
Q Consensus       198 ~~~~g~~vlI~Gag~~G~~a~~la-~~~g~~~vi~~~~~~~~~~~~~-~----~g~~~vv~~~~~~~~~~~~~i~~~~~~  271 (362)
                      ..+...+++|+|+|..|.+.+..+ ...++++|.+.+++.++.+.+. +    ++.. +....     ++.+.+.     
T Consensus       123 a~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~-----~~~~~~~-----  191 (325)
T PRK08618        123 AREDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN-----SADEAIE-----  191 (325)
T ss_pred             cCCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC-----CHHHHHh-----
Confidence            334567899999999998877554 4678889999999998876543 2    3432 22222     2333332     


Q ss_pred             CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcC
Q 018022          272 GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSG  323 (362)
Q Consensus       272 g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~  323 (362)
                      ..|+|+.|++..+.+-.  ..++++ -.++.+|.+.+. ..+++. .++.+.
T Consensus       192 ~aDiVi~aT~s~~p~i~--~~l~~G-~hV~~iGs~~p~-~~E~~~-~~~~~a  238 (325)
T PRK08618        192 EADIIVTVTNAKTPVFS--EKLKKG-VHINAVGSFMPD-MQELPS-EAIARA  238 (325)
T ss_pred             cCCEEEEccCCCCcchH--HhcCCC-cEEEecCCCCcc-cccCCH-HHHhhC
Confidence            48999999998764333  888996 788899986433 335565 344433

>PRK07832 short chain dehydrogenase; Provisional

Probab=96.39  E-value=0.062  Score=49.29  Aligned_cols=76  Identities=20%  Similarity=0.270  Sum_probs=49.1

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCcE----EEcCCCCCCccHHHHHHhhc--CCC
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE----FVNSKNCGDKSVSQIIIDMT--DGG  272 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~~----vv~~~~~~~~~~~~~i~~~~--~~g  272 (362)
                      +++|+|+ |++|.+.++.+...|+ +|+++++++++++.+    +..+...    ..|-.+  .+.+.+.+.+..  .++
T Consensus         2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~   78 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD--YDAVAAFAADIHAAHGS   78 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC--HHHHHHHHHHHHHhcCC
Confidence            6899998 9999999999888999 888999887765443    2233321    233332  122222233322  126


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        79 id~lv~~ag~   88 (272)
T PRK07832         79 MDVVMNIAGI   88 (272)
T ss_pred             CCEEEECCCC
Confidence            8999999984

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.36  E-value=0.067  Score=47.49  Aligned_cols=100  Identities=18%  Similarity=0.286  Sum_probs=69.8

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHh----cCCc--EEEcCCCCCCccHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQII  265 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~g~~--~vv~~~~~~~~~~~~~i  265 (362)
                      +.....++++++||-+|+|. |..+..+++..+. .+|++++.+++-.+.+++    .|..  .++..+.   ..     
T Consensus        68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~---~~-----  138 (212)
T PRK13942         68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG---TL-----  138 (212)
T ss_pred             HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc---cc-----
Confidence            45667889999999999866 7777777777653 299999999988776654    3443  2332221   10     


Q ss_pred             HhhcC-CCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 018022          266 IDMTD-GGADYCFECVGLASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       266 ~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  303 (362)
                       .... +.||.|+-........+.+++.|+++ |+++..
T Consensus       139 -~~~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~  175 (212)
T PRK13942        139 -GYEENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP  175 (212)
T ss_pred             -CCCcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence             0112 37999987766666567889999998 998775

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=96.35  E-value=0.085  Score=47.70  Aligned_cols=81  Identities=25%  Similarity=0.359  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEEcCCCCCCccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      .+.++||+|+ |.+|.+.++.+...|+ +|+.++++.++++.+.    ..+.. ..+..+-.+.+.+.+.+.++..  +.
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   86 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP   86 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            4678999998 9999999999988999 9999998877654432    22322 1222221112333333333221  36


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        87 id~vi~~ag~   96 (254)
T PRK08085         87 IDVLINNAGI   96 (254)
T ss_pred             CCEEEECCCc
Confidence            9999999984

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=96.35  E-value=0.042  Score=49.87  Aligned_cols=79  Identities=25%  Similarity=0.270  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh---cCCcE---EEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVTE---FVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ |.+|.+.++.+...|+ +|+++++++...+..++   .+.+.   ..|-.+  .+++.+.+.+...  +
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET--YAGAQAAMAAAVEAFG   83 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC--HHHHHHHHHHHHHHcC
Confidence            3678999998 9999999999999999 89999887543333333   23321   223222  2333334443322  3


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      .+|++|.+.|.
T Consensus        84 ~id~lv~nAg~   94 (260)
T PRK12823         84 RIDVLINNVGG   94 (260)
T ss_pred             CCeEEEECCcc
Confidence            69999999873

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=96.34  E-value=0.037  Score=48.13  Aligned_cols=99  Identities=17%  Similarity=0.203  Sum_probs=63.0

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcEEEcCCCCCCccHHHHHHhhcCCC
Q 018022          197 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTDGG  272 (362)
Q Consensus       197 ~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~~i~~~~~~g  272 (362)
                      ..++++.+||-+|+|. |..+..+++.....+|++++.+++..+.+++    .+.+. +....   .+..+ +..  .+.
T Consensus        41 ~~l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~---~d~~~-~~~--~~~  112 (187)
T PRK00107         41 PYLPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVH---GRAEE-FGQ--EEK  112 (187)
T ss_pred             hhcCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEe---ccHhh-CCC--CCC
Confidence            3355689999998855 5555566654443399999999887766653    45432 11111   12211 111  237


Q ss_pred             ccEEEEcCCC--HHHHHHHHHHhccCCceEEEEc
Q 018022          273 ADYCFECVGL--ASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       273 ~d~vid~~g~--~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      ||+|+-....  ...++.+.+.|+++ |+++++-
T Consensus       113 fDlV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~  145 (187)
T PRK00107        113 FDVVTSRAVASLSDLVELCLPLLKPG-GRFLALK  145 (187)
T ss_pred             ccEEEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence            9999974332  35577899999998 9999873

>PRK12829 short chain dehydrogenase; Provisional

Probab=96.33  E-value=0.018  Score=52.34  Aligned_cols=83  Identities=23%  Similarity=0.276  Sum_probs=54.9

Q ss_pred             CCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCc--EEE--cCCCCCCccHHHHHHhhcC-
Q 018022          198 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT--EFV--NSKNCGDKSVSQIIIDMTD-  270 (362)
Q Consensus       198 ~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~--~vv--~~~~~~~~~~~~~i~~~~~-  270 (362)
                      ..-++.++||+|+ |.+|...+..+...|+ +|++++++.+..+.+.+ ..-.  .++  |..+  +..+.+.+.+... 
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   83 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD--PAQVERVFDTAVER   83 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC--HHHHHHHHHHHHHH
Confidence            3357789999998 9999999999999999 89999998776665543 2211  222  3222  2233333333211 


Q ss_pred             -CCccEEEEcCCCH
Q 018022          271 -GGADYCFECVGLA  283 (362)
Q Consensus       271 -~g~d~vid~~g~~  283 (362)
                       +++|+||.+.|..
T Consensus        84 ~~~~d~vi~~ag~~   97 (264)
T PRK12829         84 FGGLDVLVNNAGIA   97 (264)
T ss_pred             hCCCCEEEECCCCC
Confidence             2799999988853

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.33  E-value=0.15  Score=45.94  Aligned_cols=99  Identities=20%  Similarity=0.240  Sum_probs=60.8

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch-------------------HH----HHHHhcCCcEEEcCCCCCC
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-------------------KF----EIGKRFGVTEFVNSKNCGD  258 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~-------------------~~----~~~~~~g~~~vv~~~~~~~  258 (362)
                      ..+|+|+|+|++|..++..+.+.|+.+++.+|.+.=                   |.    +.+++++.+.-+...+   
T Consensus        11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~---   87 (231)
T cd00755          11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE---   87 (231)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee---
Confidence            367999999999999999999999999999985531                   11    1223333322121111   


Q ss_pred             ccH-HHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCc-eEEEEc
Q 018022          259 KSV-SQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWG-KTIVLG  304 (362)
Q Consensus       259 ~~~-~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G-~iv~~G  304 (362)
                      ..+ .+.+.++....+|+||||+.+...-..+.+.+... + .++..+
T Consensus        88 ~~i~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~-~ip~I~s~  134 (231)
T cd00755          88 EFLTPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKR-KIPVISSM  134 (231)
T ss_pred             eecCHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHh-CCCEEEEe
Confidence            111 12233333336999999999877555566666664 4 344433

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK07890 short chain dehydrogenase; Provisional

Probab=96.31  E-value=0.07  Score=48.27  Aligned_cols=79  Identities=16%  Similarity=0.206  Sum_probs=52.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c---CCc-E--EEcCCCCCCccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F---GVT-E--FVNSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~---g~~-~--vv~~~~~~~~~~~~~i~~~~~--  270 (362)
                      .+.+++|+|+ |.+|.+.+..+...|+ +|+++++++++.+.+.+ +   +.. +  ..|-.+  .+.+...+.+...  
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   80 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD--EDQCANLVALALERF   80 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC--HHHHHHHHHHHHHHc
Confidence            4678999998 9999999999999999 89999988876654432 2   321 1  222222  2333333333321  


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +.+|++|.+.|.
T Consensus        81 g~~d~vi~~ag~   92 (258)
T PRK07890         81 GRVDALVNNAFR   92 (258)
T ss_pred             CCccEEEECCcc
Confidence            268999998874

>PRK09242 tropinone reductase; Provisional

Probab=96.30  E-value=0.099  Score=47.36  Aligned_cols=79  Identities=22%  Similarity=0.216  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c-----CCcE-EE--cCCCCCCccHHHHHHhhcC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F-----GVTE-FV--NSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~-----g~~~-vv--~~~~~~~~~~~~~i~~~~~  270 (362)
                      .+.++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+ +     +... .+  |-.+  .+++.+.+.+...
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~   84 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD--DEDRRAILDWVED   84 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC--HHHHHHHHHHHHH
Confidence            4679999998 9999999999999999 89999988877654432 1     2211 22  2222  1233333333221


Q ss_pred             --CCccEEEEcCCC
Q 018022          271 --GGADYCFECVGL  282 (362)
Q Consensus       271 --~g~d~vid~~g~  282 (362)
                        +++|++|.+.|.
T Consensus        85 ~~g~id~li~~ag~   98 (257)
T PRK09242         85 HWDGLHILVNNAGG   98 (257)
T ss_pred             HcCCCCEEEECCCC
Confidence              379999999985

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.30  E-value=0.064  Score=48.93  Aligned_cols=102  Identities=19%  Similarity=0.296  Sum_probs=62.2

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHcCCCEEEEEcCCc---hHHHHH-Hhc-CCc-EE--EcCCCCCCccHHHHHHhhc
Q 018022          201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVIS---EKFEIG-KRF-GVT-EF--VNSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       201 ~g~~vlI~Ga---g~~G~~a~~la~~~g~~~vi~~~~~~---~~~~~~-~~~-g~~-~v--v~~~~~~~~~~~~~i~~~~  269 (362)
                      .+.+++|+|+   +++|.+.++.+...|+ +|+.++++.   ++++.+ +++ +.. ..  .|-.+  .+++.+.+.++.
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~   82 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS--DEEITACFETIK   82 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC--HHHHHHHHHHHH
Confidence            4678999987   4899999998888999 888886543   333333 333 211 12  23222  233333444333


Q ss_pred             C--CCccEEEEcCCCH-------H----------------------HHHHHHHHhccCCceEEEEccC
Q 018022          270 D--GGADYCFECVGLA-------S----------------------LVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       270 ~--~g~d~vid~~g~~-------~----------------------~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      .  +.+|+++.+.|..       .                      ..+.++..++++ |+|++++..
T Consensus        83 ~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~Iv~isS~  149 (257)
T PRK08594         83 EEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEG-GSIVTLTYL  149 (257)
T ss_pred             HhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccC-ceEEEEccc
Confidence            2  3799999987631       0                      123445566776 999988764

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.29  E-value=0.023  Score=51.84  Aligned_cols=81  Identities=23%  Similarity=0.269  Sum_probs=53.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCc-EEEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EFVNSKNCGDKSVSQIIIDMTD--GGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~d~  275 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+ ++.. .++..+-.+.+++.+.+.+...  +.+|+
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   83 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC   83 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4678999998 9999999999999999 89999998887766543 3321 2222111011333333433321  26999


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|.+.|.
T Consensus        84 li~~ag~   90 (263)
T PRK06200         84 FVGNAGI   90 (263)
T ss_pred             EEECCCC
Confidence            9999884

>PRK06181 short chain dehydrogenase; Provisional

Probab=96.29  E-value=0.074  Score=48.33  Aligned_cols=77  Identities=21%  Similarity=0.280  Sum_probs=50.3

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEE--cCCCCCCccHHHHHHhhcC--CC
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv--~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      .++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+.    ..+.. .++  |-.+  ...+.+.+.+...  ++
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSD--AEACERLIEAAVARFGG   78 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHcCC
Confidence            57999998 9999999999989999 9999999876654332    22332 122  2222  2333333433321  26


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        79 id~vi~~ag~   88 (263)
T PRK06181         79 IDILVNNAGI   88 (263)
T ss_pred             CCEEEECCCc
Confidence            8999999874

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.29  E-value=0.04  Score=51.28  Aligned_cols=43  Identities=28%  Similarity=0.234  Sum_probs=38.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK  243 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~  243 (362)
                      .+.+|+|+|+|++|.+++..+...|+++|++++++.+|.+.+.
T Consensus       126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la  168 (284)
T PRK12549        126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALA  168 (284)
T ss_pred             cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence            5678999999999999999999999989999999988876653

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.28  E-value=0.085  Score=46.41  Aligned_cols=81  Identities=26%  Similarity=0.351  Sum_probs=56.6

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      .|.+++|.|.|.+|..+++.+...|+ +|++++++.++.+.+.+ +++. .++..+     +       ....+|+++-|
T Consensus        27 ~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~-----l-------~~~~~Dv~vp~   92 (200)
T cd01075          27 EGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE-----I-------YSVDADVFAPC   92 (200)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh-----h-------ccccCCEEEec
Confidence            57899999999999999999999999 99999999888776654 4643 333221     1       11148888866


Q ss_pred             CCCHHHHHHHHHHhcc
Q 018022          280 VGLASLVQEAYACCRK  295 (362)
Q Consensus       280 ~g~~~~~~~~~~~l~~  295 (362)
                      ......-...++.++.
T Consensus        93 A~~~~I~~~~~~~l~~  108 (200)
T cd01075          93 ALGGVINDDTIPQLKA  108 (200)
T ss_pred             ccccccCHHHHHHcCC
Confidence            5544334455566654

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK05866 short chain dehydrogenase; Provisional

Probab=96.28  E-value=0.026  Score=52.62  Aligned_cols=81  Identities=22%  Similarity=0.279  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EEEcCCCCCCccHHHHHHhhc--CCC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMT--DGG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~~i~~~~--~~g  272 (362)
                      .+.+++|+|+ |++|.+.++.+...|+ +|++++++.++++.+.+    .+.. .++..+-.+.+++.+.+.+..  -+.
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  117 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG  117 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3578999998 9999999999888999 99999998877655432    2322 222222101223333333221  137


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus       118 id~li~~AG~  127 (293)
T PRK05866        118 VDILINNAGR  127 (293)
T ss_pred             CCEEEECCCC
Confidence            8999999884

>PRK09186 flagellin modification protein A; Provisional

Probab=96.28  E-value=0.063  Score=48.50  Aligned_cols=78  Identities=21%  Similarity=0.362  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-Hhc----CCcE--E--EcCCCCCCccHHHHHHhhcC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF----GVTE--F--VNSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~----g~~~--v--v~~~~~~~~~~~~~i~~~~~  270 (362)
                      .+.++||+|+ |.+|...+..+...|+ +|++++++.++.+.+ +++    +...  +  .|-.+  ++.+.+.+.+...
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~   79 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD--QESLEEFLSKSAE   79 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC--HHHHHHHHHHHHH
Confidence            4678999998 9999999999999999 899999887776543 222    2211  2  23222  2334344443322


Q ss_pred             --CCccEEEEcCC
Q 018022          271 --GGADYCFECVG  281 (362)
Q Consensus       271 --~g~d~vid~~g  281 (362)
                        +++|++|.+.+
T Consensus        80 ~~~~id~vi~~A~   92 (256)
T PRK09186         80 KYGKIDGAVNCAY   92 (256)
T ss_pred             HcCCccEEEECCc
Confidence              26899999885

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.27  E-value=0.074  Score=47.46  Aligned_cols=78  Identities=23%  Similarity=0.308  Sum_probs=51.9

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCcE-E--EcCCCCCCccHHHHHHhhcC--C
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--VNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~~-v--v~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      +.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+    +..+... .  .|..+  +..+.+.+.+...  +
T Consensus         5 ~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   81 (246)
T PRK05653          5 GKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD--EAAVRALIEAAVEAFG   81 (246)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHhC
Confidence            468999998 9999999999888999 799999988775443    2234322 2  23222  2334444443321  2


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      .+|.+|.+.|.
T Consensus        82 ~id~vi~~ag~   92 (246)
T PRK05653         82 ALDILVNNAGI   92 (246)
T ss_pred             CCCEEEECCCc
Confidence            68999999865

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.27  E-value=0.076  Score=44.99  Aligned_cols=87  Identities=25%  Similarity=0.255  Sum_probs=59.0

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCH
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  283 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~  283 (362)
                      +|-++|.|.+|...+.-+...|+ +|++.++++++.+.+.+.|+..+        .+..+.+.+     .|+||-|+...
T Consensus         3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~--------~s~~e~~~~-----~dvvi~~v~~~   68 (163)
T PF03446_consen    3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA--------DSPAEAAEQ-----ADVVILCVPDD   68 (163)
T ss_dssp             EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE--------SSHHHHHHH-----BSEEEE-SSSH
T ss_pred             EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh--------hhhhhHhhc-----ccceEeecccc
Confidence            68899999999999999999999 99999999999999888774322        223333332     68888888886


Q ss_pred             HHHHHH------HHHhccCCceEEEEcc
Q 018022          284 SLVQEA------YACCRKGWGKTIVLGV  305 (362)
Q Consensus       284 ~~~~~~------~~~l~~~~G~iv~~G~  305 (362)
                      ..+...      +..++++ ..++.++.
T Consensus        69 ~~v~~v~~~~~i~~~l~~g-~iiid~sT   95 (163)
T PF03446_consen   69 DAVEAVLFGENILAGLRPG-KIIIDMST   95 (163)
T ss_dssp             HHHHHHHHCTTHGGGS-TT-EEEEE-SS
T ss_pred             hhhhhhhhhhHHhhccccc-eEEEecCC
Confidence            555544      3345554 55666654

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.26  E-value=0.017  Score=52.61  Aligned_cols=79  Identities=18%  Similarity=0.207  Sum_probs=53.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc-CCc-EEE--cCCCCCCccHHHHHHhhcC--CCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVT-EFV--NSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-g~~-~vv--~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      .+.+++|+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+. +.. ..+  |-.+  .++..+.+.+...  +.+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i   80 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS--LDDHKEAVARCVAAFGKI   80 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence            4689999998 9999999999999999 899999988777666543 321 122  2222  1233333433322  368


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        81 d~li~~Ag~   89 (262)
T TIGR03325        81 DCLIPNAGI   89 (262)
T ss_pred             CEEEECCCC
Confidence            999999873

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06101 short chain dehydrogenase; Provisional

Probab=96.24  E-value=0.088  Score=47.31  Aligned_cols=75  Identities=12%  Similarity=0.069  Sum_probs=49.0

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC-cEE--EcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEF--VNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~-~~v--v~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      .+++|+|+ |++|...+..+...|+ +|+++++++++++.+.+.+. ..+  .|-.+  .+++.+.+.+.. ...|+++.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~-~~~d~~i~   77 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD--HPGTKAALSQLP-FIPELWIF   77 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC--HHHHHHHHHhcc-cCCCEEEE
Confidence            46899998 9999998888888999 89999999888776654331 122  23222  233444444332 24677776


Q ss_pred             cCC
Q 018022          279 CVG  281 (362)
Q Consensus       279 ~~g  281 (362)
                      +.|
T Consensus        78 ~ag   80 (240)
T PRK06101         78 NAG   80 (240)
T ss_pred             cCc
Confidence            665

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.24  E-value=0.014  Score=49.92  Aligned_cols=103  Identities=19%  Similarity=0.189  Sum_probs=66.4

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC-CCCC-------------CccHHHHHH
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS-KNCG-------------DKSVSQIII  266 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~-~~~~-------------~~~~~~~i~  266 (362)
                      +..+|+|+|+|.+|+.|+++++.+|+ +++..+...++++.++..+...+... ....             .....+.+.
T Consensus        19 ~p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~   97 (168)
T PF01262_consen   19 PPAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA   97 (168)
T ss_dssp             -T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred             CCeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence            34789999999999999999999999 99999999999888888776543321 1100             112222333


Q ss_pred             hhcCCCccEEEEcCC-----CHHH-HHHHHHHhccCCceEEEEccC
Q 018022          267 DMTDGGADYCFECVG-----LASL-VQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       267 ~~~~~g~d~vid~~g-----~~~~-~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      +... .+|++|-+.=     .+.. .++.++.|+++ .-|+.+...
T Consensus        98 ~~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D  141 (168)
T PF01262_consen   98 EFIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCD  141 (168)
T ss_dssp             HHHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGG
T ss_pred             HHHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEec
Confidence            3221 4799885321     1222 35788889996 788888764

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.23  E-value=0.052  Score=49.03  Aligned_cols=81  Identities=21%  Similarity=0.236  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EEEcCCCCCCccHHHHHHhhc--CCC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMT--DGG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~~i~~~~--~~g  272 (362)
                      .+.++||+|+ |.+|...++.+...|+ +|++++++.++.+.+..    .+.. +.+..+-.+++++.+.+.++.  .++
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999998 9999999998888999 99999998877654322    2322 222221111233333333322  136


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.++|.
T Consensus        82 ~d~vi~~a~~   91 (258)
T PRK12429         82 VDILVNNAGI   91 (258)
T ss_pred             CCEEEECCCC
Confidence            9999998874

>PRK06128 oxidoreductase; Provisional

Probab=96.22  E-value=0.092  Score=49.04  Aligned_cols=102  Identities=23%  Similarity=0.207  Sum_probs=62.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCch--H----HHHHHhcCCcE-EE--cCCCCCCccHHHHHHhhcC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--K----FEIGKRFGVTE-FV--NSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~--~----~~~~~~~g~~~-vv--~~~~~~~~~~~~~i~~~~~  270 (362)
                      .+.++||+|+ |++|.+.+..+...|+ +|+.+.++.+  +    .+.+++.+... ++  |-.+  .+.+.+.+.+...
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~  130 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD--EAFCRQLVERAVK  130 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHHHHH
Confidence            4679999998 9999999999999999 7777765432  1    12233444322 22  2222  1223333333221


Q ss_pred             --CCccEEEEcCCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          271 --GGADYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       271 --~g~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                        +++|++|.+.|..                          ..++.++..++.+ |+|++++..
T Consensus       131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~iv~~sS~  193 (300)
T PRK06128        131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG-ASIINTGSI  193 (300)
T ss_pred             HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC-CEEEEECCc
Confidence              2699999998841                          1234455566776 899988654

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.22  E-value=0.023  Score=51.43  Aligned_cols=81  Identities=22%  Similarity=0.240  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE--EEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE--FVNSKNCGDKSVSQIIIDMTD--GGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~~i~~~~~--~g~d~  275 (362)
                      .+.++||+|+ |.+|...++.+...|+ +|+.++++.+..+...+.....  .+..+-...+++.+.+.+...  +++|+
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4679999998 9999999999988999 8999998877665555543211  222221112333333333321  26899


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|.+.|.
T Consensus        93 vi~~ag~   99 (255)
T PRK06841         93 LVNSAGV   99 (255)
T ss_pred             EEECCCC
Confidence            9999985

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.20  E-value=0.029  Score=51.15  Aligned_cols=81  Identities=25%  Similarity=0.336  Sum_probs=53.4

Q ss_pred             CCCCCEEEEECC-C-hHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-----cCCcEE--E--cCCCCCCccHHHHHHh
Q 018022          199 VEVGSTVVIFGL-G-SIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVTEF--V--NSKNCGDKSVSQIIID  267 (362)
Q Consensus       199 ~~~g~~vlI~Ga-g-~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~g~~~v--v--~~~~~~~~~~~~~i~~  267 (362)
                      +..+.+++|+|+ | ++|.+.++.+...|+ +|++++++.++++...+     ++...+  +  |-.+  ++++.+.+.+
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~   90 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS--EAQVDALIDA   90 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC--HHHHHHHHHH
Confidence            445789999987 6 799999999999999 89999988877654432     343222  2  3222  1233333333


Q ss_pred             hc--CCCccEEEEcCCC
Q 018022          268 MT--DGGADYCFECVGL  282 (362)
Q Consensus       268 ~~--~~g~d~vid~~g~  282 (362)
                      ..  .+.+|++|.+.|.
T Consensus        91 ~~~~~g~id~li~~ag~  107 (262)
T PRK07831         91 AVERLGRLDVLVNNAGL  107 (262)
T ss_pred             HHHHcCCCCEEEECCCC
Confidence            21  1378999999984

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.19  E-value=0.11  Score=47.72  Aligned_cols=80  Identities=15%  Similarity=0.197  Sum_probs=48.3

Q ss_pred             CCCEEEEECC-C--hHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcEEEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g--~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ +  ++|.+.++.+...|+ +|+.+++++...+.+++    .+....+.-+-.+.+++.+.+.+...  +
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   83 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP   83 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence            4678999997 3  799999998888999 88888776421222322    23222222111112334444443332  3


Q ss_pred             CccEEEEcCC
Q 018022          272 GADYCFECVG  281 (362)
Q Consensus       272 g~d~vid~~g  281 (362)
                      .+|++|++.|
T Consensus        84 ~iD~linnAg   93 (262)
T PRK07984         84 KFDGFVHSIG   93 (262)
T ss_pred             CCCEEEECCc
Confidence            6899999997

>PRK06398 aldose dehydrogenase; Validated

Probab=96.19  E-value=0.045  Score=49.85  Aligned_cols=74  Identities=22%  Similarity=0.284  Sum_probs=48.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADYC  276 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d~v  276 (362)
                      .+.++||+|+ +++|.+.+..+...|+ +|+++++++++..     .... ..|-.+  +.++.+.+.+...  +.+|++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~--~~~i~~~~~~~~~~~~~id~l   76 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSN--KEQVIKGIDYVISKYGRIDIL   76 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            3679999998 9999999999999999 8999988765432     1111 123222  2333333433322  269999


Q ss_pred             EEcCCC
Q 018022          277 FECVGL  282 (362)
Q Consensus       277 id~~g~  282 (362)
                      |.+.|.
T Consensus        77 i~~Ag~   82 (258)
T PRK06398         77 VNNAGI   82 (258)
T ss_pred             EECCCC
Confidence            998874

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.19  E-value=0.098  Score=48.19  Aligned_cols=81  Identities=19%  Similarity=0.284  Sum_probs=49.7

Q ss_pred             CCCCEEEEECC---ChHHHHHHHHHHHcCCCEEEEEcCCc---hHHHHH-HhcCCcEEEcCCCCCCccHHHHHHhhcC--
Q 018022          200 EVGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVIS---EKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       200 ~~g~~vlI~Ga---g~~G~~a~~la~~~g~~~vi~~~~~~---~~~~~~-~~~g~~~vv~~~~~~~~~~~~~i~~~~~--  270 (362)
                      -.+.++||+|+   +++|++.++.+...|+ +|+.+.+++   ++++.+ ++++....+..+-.+.++..+.+.++..  
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence            35678999987   5899999999999999 888887653   333333 3345322222221112333333333322  


Q ss_pred             CCccEEEEcCC
Q 018022          271 GGADYCFECVG  281 (362)
Q Consensus       271 ~g~d~vid~~g  281 (362)
                      +.+|++|.+.|
T Consensus        87 g~iD~lv~nAG   97 (272)
T PRK08159         87 GKLDFVVHAIG   97 (272)
T ss_pred             CCCcEEEECCc
Confidence            36899999987

>PRK07814 short chain dehydrogenase; Provisional

Probab=96.18  E-value=0.028  Score=51.36  Aligned_cols=79  Identities=16%  Similarity=0.193  Sum_probs=52.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EEE--cCCCCCCccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFV--NSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~vv--~~~~~~~~~~~~~i~~~~~--  270 (362)
                      ++.++||+|+ |.+|.+.++.+...|+ +|++++++.++.+.+.+    .+.. .++  |..+  +..+.+.+.+...  
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   85 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH--PEATAGLAGQAVEAF   85 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            4789999998 8999999999999999 99999998877654432    2322 222  3222  2233333333321  


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +++|++|.+.|.
T Consensus        86 ~~id~vi~~Ag~   97 (263)
T PRK07814         86 GRLDIVVNNVGG   97 (263)
T ss_pred             CCCCEEEECCCC
Confidence            369999998873

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.16  E-value=0.049  Score=51.25  Aligned_cols=91  Identities=25%  Similarity=0.416  Sum_probs=62.7

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      .+|.|+|+|.+|.+.+..++..|. .+|++.++++++.+.+++.|....+.      .+..+.+     ...|+||.|++
T Consensus         7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~------~~~~~~~-----~~aDvViiavp   75 (307)
T PRK07502          7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT------TSAAEAV-----KGADLVILCVP   75 (307)
T ss_pred             cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec------CCHHHHh-----cCCCEEEECCC
Confidence            579999999999999998888884 38999999999988888887532111      1122222     25899999998


Q ss_pred             CHHH---HHHHHHHhccCCceEEEEcc
Q 018022          282 LASL---VQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       282 ~~~~---~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ....   +..+...++++ ..++.+|.
T Consensus        76 ~~~~~~v~~~l~~~l~~~-~iv~dvgs  101 (307)
T PRK07502         76 VGASGAVAAEIAPHLKPG-AIVTDVGS  101 (307)
T ss_pred             HHHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence            7542   33344456665 56666654

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.15  E-value=0.029  Score=50.85  Aligned_cols=79  Identities=22%  Similarity=0.223  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EE--EcCCCCCCccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EF--VNSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~v--v~~~~~~~~~~~~~i~~~~~--  270 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++.++++.+.+    .+.. ..  .|-.+  ++.+.+.+.+...  
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   84 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ--HQQVTSMLDQVTAEL   84 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            4788999998 9999999999999999 89999998877655432    2322 12  23222  2333333333321  


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +++|++|.+.|.
T Consensus        85 g~id~lv~~ag~   96 (253)
T PRK05867         85 GGIDIAVCNAGI   96 (253)
T ss_pred             CCCCEEEECCCC
Confidence            379999998874

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.14  E-value=0.048  Score=45.44  Aligned_cols=96  Identities=22%  Similarity=0.260  Sum_probs=62.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHH-HHhcCCcE-EEcCCCCCCccHHHHHHhhcCCCccEEE
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGVTE-FVNSKNCGDKSVSQIIIDMTDGGADYCF  277 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~-~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~~g~d~vi  277 (362)
                      ..+.+++|+|+|.+|...++.+...|...|++++++.++.+. +++++... ....     .+..+.+     .++|+||
T Consensus        17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-----~~~Dvvi   86 (155)
T cd01065          17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAY-----LDLEELL-----AEADLII   86 (155)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceee-----cchhhcc-----ccCCEEE
Confidence            456889999999999999988888874489999998887665 44555421 0111     1111111     2699999


Q ss_pred             EcCCCHHH----HHHHHHHhccCCceEEEEccC
Q 018022          278 ECVGLASL----VQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       278 d~~g~~~~----~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      .|++....    .......++++ ..++.++..
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~-~~v~D~~~~  118 (155)
T cd01065          87 NTTPVGMKPGDELPLPPSLLKPG-GVVYDVVYN  118 (155)
T ss_pred             eCcCCCCCCCCCCCCCHHHcCCC-CEEEEcCcC
Confidence            99987642    11223446675 667777653

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK14967 putative methyltransferase; Provisional

Probab=96.13  E-value=0.11  Score=46.45  Aligned_cols=98  Identities=18%  Similarity=0.193  Sum_probs=65.7

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EEEcCCCCCCccHHHHHHhhc
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~~i~~~~  269 (362)
                      ....++++++||-.|+|. |..+..+++. +..++++++.+++.++.+++    .+.. .+++      .++.+.   +.
T Consensus        30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~------~d~~~~---~~   98 (223)
T PRK14967         30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR------GDWARA---VE   98 (223)
T ss_pred             HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE------Cchhhh---cc
Confidence            445678899999999987 8888888775 55599999999988776554    3432 2332      222221   12


Q ss_pred             CCCccEEEEcCC---C------------------------HHHHHHHHHHhccCCceEEEEc
Q 018022          270 DGGADYCFECVG---L------------------------ASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       270 ~~g~d~vid~~g---~------------------------~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      .+.||+|+...+   .                        ...+.++.+.|+++ |+++++-
T Consensus        99 ~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~~  159 (223)
T PRK14967         99 FRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLVQ  159 (223)
T ss_pred             CCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence            237999997532   0                        12345678899998 9998763

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=96.12  E-value=0.13  Score=46.41  Aligned_cols=79  Identities=18%  Similarity=0.305  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCc-EEE--cCCCCCCccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~-~vv--~~~~~~~~~~~~~i~~~~~--  270 (362)
                      ++.+++|+|+ |.+|...+..+...|+ +|+.++++.++++.+    ++.+.. ..+  |-.+  ++++.+.+.+...  
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   86 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD--EEAVAAAFARIDAEH   86 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhc
Confidence            5789999998 9999999988888999 999999987765443    233321 222  2222  2333333333322  


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +.+|++|.+.|.
T Consensus        87 ~~id~vi~~ag~   98 (256)
T PRK06124         87 GRLDILVNNVGA   98 (256)
T ss_pred             CCCCEEEECCCC
Confidence            368999999884

>CHL00194 ycf39 Ycf39; Provisional

Probab=96.11  E-value=0.07  Score=50.30  Aligned_cols=94  Identities=11%  Similarity=0.100  Sum_probs=61.8

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE-cCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV-NSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      +|+|+|+ |.+|...+..+...|+ +|++++|+.++...+...+...+. |..+      .+.+.+... ++|+||.+++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d------~~~l~~al~-g~d~Vi~~~~   73 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL------PETLPPSFK-GVTAIIDAST   73 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC------HHHHHHHHC-CCCEEEECCC
Confidence            6999998 9999999999999999 899999887776655555654332 2222      122333222 5899999876


Q ss_pred             CHH------------HHHHHHHHhccCCc--eEEEEccC
Q 018022          282 LAS------------LVQEAYACCRKGWG--KTIVLGVD  306 (362)
Q Consensus       282 ~~~------------~~~~~~~~l~~~~G--~iv~~G~~  306 (362)
                      ...            ....+++.++.. |  +++.++..
T Consensus        74 ~~~~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss~  111 (317)
T CHL00194         74 SRPSDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSIL  111 (317)
T ss_pred             CCCCCccchhhhhHHHHHHHHHHHHHc-CCCEEEEeccc
Confidence            321            113455555554 4  78887763

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.05  E-value=0.06  Score=47.43  Aligned_cols=35  Identities=31%  Similarity=0.322  Sum_probs=31.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      ...+|+|+|+|++|..+++.+.+.|+.+++.+|.+
T Consensus        20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            45789999999999999999999999899999876

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK06196 oxidoreductase; Provisional

Probab=96.05  E-value=0.038  Score=51.99  Aligned_cols=79  Identities=19%  Similarity=0.205  Sum_probs=52.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCcEEE--cCCCCCCccHHHHHHhhcC--CCcc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFV--NSKNCGDKSVSQIIIDMTD--GGAD  274 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~~vv--~~~~~~~~~~~~~i~~~~~--~g~d  274 (362)
                      .+.+++|+|+ |++|.+++..+...|+ +|++++++.++.+.+. ++..-+++  |-.+  ..++.+.+.++..  +++|
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d--~~~v~~~~~~~~~~~~~iD  101 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD--LESVRAFAERFLDSGRRID  101 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC--HHHHHHHHHHHHhcCCCCC
Confidence            4678999998 9999999998888999 8999999887765432 23211222  2222  1233333433322  3799


Q ss_pred             EEEEcCCC
Q 018022          275 YCFECVGL  282 (362)
Q Consensus       275 ~vid~~g~  282 (362)
                      ++|.+.|.
T Consensus       102 ~li~nAg~  109 (315)
T PRK06196        102 ILINNAGV  109 (315)
T ss_pred             EEEECCCC
Confidence            99999874

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=96.03  E-value=0.093  Score=47.33  Aligned_cols=112  Identities=22%  Similarity=0.350  Sum_probs=78.1

Q ss_pred             hhhHH-HHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcE--EEcCCCCCCc
Q 018022          187 STGVG-AAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDK  259 (362)
Q Consensus       187 ~ta~~-~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~--vv~~~~~~~~  259 (362)
                      ...|. .+....+..+|++||=+|+|. |-.+..+++..|-..|+++|.+++-++.+++    .|...  .+..+.    
T Consensus        36 ~~~Wr~~~i~~~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dA----  110 (238)
T COG2226          36 HRLWRRALISLLGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDA----  110 (238)
T ss_pred             hHHHHHHHHHhhCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEech----
Confidence            34444 244556677999999987765 8889999999886699999999998888765    22221  121111    


Q ss_pred             cHHHHHHhhcCCCccEEEEcCCC------HHHHHHHHHHhccCCceEEEEccCCC
Q 018022          260 SVSQIIIDMTDGGADYCFECVGL------ASLVQEAYACCRKGWGKTIVLGVDQP  308 (362)
Q Consensus       260 ~~~~~i~~~~~~g~d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G~~~~  308 (362)
                         +.+- +.+..||++..+.|-      +.++.++.+.|+|+ |+++.+-...+
T Consensus       111 ---e~LP-f~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p  160 (238)
T COG2226         111 ---ENLP-FPDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKP  160 (238)
T ss_pred             ---hhCC-CCCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCC
Confidence               1111 223379999887774      35689999999998 99998877543

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=96.03  E-value=0.13  Score=46.31  Aligned_cols=76  Identities=16%  Similarity=0.287  Sum_probs=51.1

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcE-EE--cCCCCCCccHHHHHHhhcC--CCccEE
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTE-FV--NSKNCGDKSVSQIIIDMTD--GGADYC  276 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~-vv--~~~~~~~~~~~~~i~~~~~--~g~d~v  276 (362)
                      +++|+|+ |.+|.+.+..+...|+ +|++++++.++++.+.. ++... .+  |-.+  .+++.+.+.++..  +++|++
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~id~v   78 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN--RAAIEEMLASLPAEWRNIDVL   78 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            6899998 9999999999999999 89999998887766543 34321 22  2222  2333333333322  269999


Q ss_pred             EEcCCC
Q 018022          277 FECVGL  282 (362)
Q Consensus       277 id~~g~  282 (362)
                      |.+.|.
T Consensus        79 i~~ag~   84 (248)
T PRK10538         79 VNNAGL   84 (248)
T ss_pred             EECCCc
Confidence            998874

>PRK07677 short chain dehydrogenase; Provisional

Probab=96.01  E-value=0.034  Score=50.36  Aligned_cols=80  Identities=21%  Similarity=0.205  Sum_probs=51.6

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCC-cEEEcCCCCCCccHHHHHHhhcC--CCc
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV-TEFVNSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~-~~vv~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      +.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+    .+. .+++..+-.+++.+.+.+.+...  +.+
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI   79 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence            468999998 9999999999999999 99999988876654432    222 12332221012333333333321  368


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        80 d~lI~~ag~   88 (252)
T PRK07677         80 DALINNAAG   88 (252)
T ss_pred             cEEEECCCC
Confidence            999999874

>PRK12937 short chain dehydrogenase; Provisional

Probab=96.00  E-value=0.16  Score=45.43  Aligned_cols=104  Identities=18%  Similarity=0.162  Sum_probs=61.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCch-HHH----HHHhcCCc-EEEcCCCCCCccHHHHHHhhc--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-KFE----IGKRFGVT-EFVNSKNCGDKSVSQIIIDMT--DG  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~-~~~----~~~~~g~~-~vv~~~~~~~~~~~~~i~~~~--~~  271 (362)
                      ++.+++|+|+ |.+|...++.+...|+ +++.+.++.. +.+    .+...+.. ..+..+-.+.+++.+.+.+..  .+
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG   82 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4678999998 9999999999999999 7766655433 222    22233322 222222101223333333322  13


Q ss_pred             CccEEEEcCCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          272 GADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       272 g~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      ++|++|.+.|..                         ..++.+++.++.+ |+++.++..
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~  141 (245)
T PRK12937         83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG-GRIINLSTS  141 (245)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC-cEEEEEeec
Confidence            699999998841                         1123445566675 899988753

>PRK07985 oxidoreductase; Provisional

Probab=96.00  E-value=0.12  Score=48.28  Aligned_cols=102  Identities=21%  Similarity=0.175  Sum_probs=62.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc--hHHHHH----HhcCCcE-EE--cCCCCCCccHHHHHHhhcC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS--EKFEIG----KRFGVTE-FV--NSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~--~~~~~~----~~~g~~~-vv--~~~~~~~~~~~~~i~~~~~  270 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+.++.  ++.+.+    ++.+... ++  |-.+  .+++.+.+.+...
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~  124 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD--EKFARSLVHEAHK  124 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC--HHHHHHHHHHHHH
Confidence            5678999998 9999999999999999 888876543  233322    2334321 22  2222  2333333333322


Q ss_pred             --CCccEEEEcCCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          271 --GGADYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       271 --~g~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                        +++|+++.+.|..                          ..++.++..++.+ |++++++..
T Consensus       125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~  187 (294)
T PRK07985        125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSI  187 (294)
T ss_pred             HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCc
Confidence              3689999987731                          1233455566676 899988754

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=95.99  E-value=0.052  Score=48.87  Aligned_cols=81  Identities=16%  Similarity=0.263  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCch--HHHHHHhcCCc-EEEcCCCCCCccHHHHHHhhcC--CCcc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GGAD  274 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~--~~~~~~~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~d  274 (362)
                      .+.++||+|+ |.+|.+.+..+...|+ +|++++++..  ..+.+++.+.. .++..+-.+.+++.+.+.+...  +++|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4688999998 9999999999999999 8999987652  12333444432 2222221112334444443322  2699


Q ss_pred             EEEEcCCC
Q 018022          275 YCFECVGL  282 (362)
Q Consensus       275 ~vid~~g~  282 (362)
                      ++|.+.|.
T Consensus        83 ~li~~ag~   90 (248)
T TIGR01832        83 ILVNNAGI   90 (248)
T ss_pred             EEEECCCC
Confidence            99999874

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=95.98  E-value=0.079  Score=48.84  Aligned_cols=105  Identities=19%  Similarity=0.342  Sum_probs=75.2

Q ss_pred             hHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc---EEE--cCCCCCCc
Q 018022          189 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFV--NSKNCGDK  259 (362)
Q Consensus       189 a~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~---~vv--~~~~~~~~  259 (362)
                      ++..+.+.+++++|++||=+|+|- |.+++-+|+..|+ +|++++-+++..+.+++    .|..   ++.  ++++    
T Consensus        60 k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd----  133 (283)
T COG2230          60 KLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRD----  133 (283)
T ss_pred             HHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccc----
Confidence            444567889999999999999976 7778888888899 99999999998777654    5553   121  2222    


Q ss_pred             cHHHHHHhhcCCCccEEEE-----cCCC---HHHHHHHHHHhccCCceEEEEccCCCC
Q 018022          260 SVSQIIIDMTDGGADYCFE-----CVGL---ASLVQEAYACCRKGWGKTIVLGVDQPG  309 (362)
Q Consensus       260 ~~~~~i~~~~~~g~d~vid-----~~g~---~~~~~~~~~~l~~~~G~iv~~G~~~~~  309 (362)
                              +. +.||.|+-     .+|.   +..+..+.+.|+++ |++.+.......
T Consensus       134 --------~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~~  181 (283)
T COG2230         134 --------FE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGPD  181 (283)
T ss_pred             --------cc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCCC
Confidence                    11 13776653     4444   35578899999998 999887664433

>PRK07904 short chain dehydrogenase; Provisional

Probab=95.98  E-value=0.056  Score=49.20  Aligned_cols=83  Identities=23%  Similarity=0.286  Sum_probs=51.5

Q ss_pred             CCCCCEEEEECC-ChHHHHHHHHHHHcC-CCEEEEEcCCchH-HHH----HHhcCC--cEEEcCCCCCCccHHHHHHhhc
Q 018022          199 VEVGSTVVIFGL-GSIGLAVAEGARLCG-ATRIIGVDVISEK-FEI----GKRFGV--TEFVNSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       199 ~~~g~~vlI~Ga-g~~G~~a~~la~~~g-~~~vi~~~~~~~~-~~~----~~~~g~--~~vv~~~~~~~~~~~~~i~~~~  269 (362)
                      +..+.++||+|+ |++|.+.++-+...| + +|++++++.++ ++.    +++.+.  .+++..+-.+.+++.+.+.+..
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   83 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF   83 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence            456789999998 999999888776664 7 99999988765 433    233332  1233222111233333344333


Q ss_pred             C-CCccEEEEcCCC
Q 018022          270 D-GGADYCFECVGL  282 (362)
Q Consensus       270 ~-~g~d~vid~~g~  282 (362)
                      . +++|++|.+.|.
T Consensus        84 ~~g~id~li~~ag~   97 (253)
T PRK07904         84 AGGDVDVAIVAFGL   97 (253)
T ss_pred             hcCCCCEEEEeeec
Confidence            2 379999987765

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.97  E-value=0.1  Score=47.20  Aligned_cols=81  Identities=21%  Similarity=0.208  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCcE-EEcCCCCCCccHHHHHHhhc--CCC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-FVNSKNCGDKSVSQIIIDMT--DGG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~~-vv~~~~~~~~~~~~~i~~~~--~~g  272 (362)
                      .+.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+    ++.+... .+..+-.+...+.+.+.+..  .++
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS   84 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4679999998 9999999999999999 899999888665433    3344332 22222101122323333221  126


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        85 ~d~vi~~ag~   94 (262)
T PRK13394         85 VDILVSNAGI   94 (262)
T ss_pred             CCEEEECCcc
Confidence            8999999885

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=95.97  E-value=0.06  Score=50.06  Aligned_cols=128  Identities=22%  Similarity=0.300  Sum_probs=73.8

Q ss_pred             CceEEcCCCCCccchhccccchhhhHHHHH-HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH
Q 018022          165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAW-RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK  243 (362)
Q Consensus       165 ~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~-~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~  243 (362)
                      +.++++.+++.+-    ......|++. +. ....+++|.+||=+|+|. |.+++..++ +|+.+++++|.++--.+.++
T Consensus       130 ~~~i~lDPGlAFG----TG~HpTT~lc-L~~Le~~~~~g~~vlDvGcGS-GILaIAa~k-LGA~~v~g~DiDp~AV~aa~  202 (300)
T COG2264         130 ELNIELDPGLAFG----TGTHPTTSLC-LEALEKLLKKGKTVLDVGCGS-GILAIAAAK-LGAKKVVGVDIDPQAVEAAR  202 (300)
T ss_pred             ceEEEEccccccC----CCCChhHHHH-HHHHHHhhcCCCEEEEecCCh-hHHHHHHHH-cCCceEEEecCCHHHHHHHH
Confidence            4566666665332    2222233332 22 223356999999999865 665555444 56669999998887666555


Q ss_pred             h----cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCH---HHHHHHHHHhccCCceEEEEccC
Q 018022          244 R----FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA---SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       244 ~----~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      +    .+....+....   .+   ......++.||+|+-.+=..   ....++...++++ |++++.|-.
T Consensus       203 eNa~~N~v~~~~~~~~---~~---~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl  265 (300)
T COG2264         203 ENARLNGVELLVQAKG---FL---LLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGIL  265 (300)
T ss_pred             HHHHHcCCchhhhccc---cc---chhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeeh
Confidence            4    23332110000   00   11112224799998755322   3456888999997 999999975

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.93  E-value=0.041  Score=57.20  Aligned_cols=77  Identities=27%  Similarity=0.304  Sum_probs=56.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch---------------------HHHHHHhcCCcEEEcCCCCCCc
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE---------------------KFEIGKRFGVTEFVNSKNCGDK  259 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~---------------------~~~~~~~~g~~~vv~~~~~~~~  259 (362)
                      .+++|+|+|+|+.|+.++..++..|+ .|+++++.+.                     +.++++++|++..++..-..+.
T Consensus       309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  387 (639)
T PRK12809        309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI  387 (639)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence            48999999999999999999999999 7888887663                     5667788898766654321111


Q ss_pred             cHHHHHHhhcCCCccEEEEcCCCH
Q 018022          260 SVSQIIIDMTDGGADYCFECVGLA  283 (362)
Q Consensus       260 ~~~~~i~~~~~~g~d~vid~~g~~  283 (362)
                      .+.    ++. .++|.||.++|..
T Consensus       388 ~~~----~l~-~~~DaV~latGa~  406 (639)
T PRK12809        388 TFS----DLT-SEYDAVFIGVGTY  406 (639)
T ss_pred             CHH----HHH-hcCCEEEEeCCCC
Confidence            222    221 2699999999974

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.93  E-value=0.11  Score=46.60  Aligned_cols=109  Identities=22%  Similarity=0.212  Sum_probs=68.5

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCC--EEEEEcCC----chH--------HHHHHhcCCcEEEcCCCCCCccHHHHH
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGAT--RIIGVDVI----SEK--------FEIGKRFGVTEFVNSKNCGDKSVSQII  265 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~--~vi~~~~~----~~~--------~~~~~~~g~~~vv~~~~~~~~~~~~~i  265 (362)
                      -.+.+++|+|+|..|.+++..+...|.+  +++.++++    .+|        .++++.++... .   .   .++.+.+
T Consensus        23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~---~~l~~~l   95 (226)
T cd05311          23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---G---GTLKEAL   95 (226)
T ss_pred             ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---c---CCHHHHH
Confidence            3567999999999999999999999998  89999998    444        33444443211 0   1   1343444


Q ss_pred             HhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcE
Q 018022          266 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKI  325 (362)
Q Consensus       266 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~  325 (362)
                      .     ++|++|.+++....-...++.|.++ ..+..+..  + . .+..+......+..
T Consensus        96 ~-----~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~lsn--P-~-~e~~~~~A~~~ga~  145 (226)
T cd05311          96 K-----GADVFIGVSRPGVVKKEMIKKMAKD-PIVFALAN--P-V-PEIWPEEAKEAGAD  145 (226)
T ss_pred             h-----cCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEeCC--C-C-CcCCHHHHHHcCCc
Confidence            2     4899999998443234677778775 55544432  1 2 23344444444443

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=95.93  E-value=0.023  Score=50.53  Aligned_cols=101  Identities=18%  Similarity=0.223  Sum_probs=67.8

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHh----cCCcE--EEcCCCCCCccHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQII  265 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~g~~~--vv~~~~~~~~~~~~~i  265 (362)
                      +.+...++++++||-+|+|. |..++.+++..+. .+|++++.+++-.+.+++    .|.+.  ++..+.      .+..
T Consensus        69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~------~~~~  141 (215)
T TIGR00080        69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDG------TQGW  141 (215)
T ss_pred             HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCc------ccCC
Confidence            45667889999999999866 6666777776653 279999999887776653    45432  222211      1111


Q ss_pred             HhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 018022          266 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       266 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  303 (362)
                      .  ..+.||.|+-..........+.+.|+++ |++++.
T Consensus       142 ~--~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~  176 (215)
T TIGR00080       142 E--PLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP  176 (215)
T ss_pred             c--ccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence            0  1127999987665555567888999998 998865

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=95.92  E-value=0.059  Score=50.29  Aligned_cols=95  Identities=23%  Similarity=0.385  Sum_probs=60.4

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EE-EcCCCCCCccHHHHHHhhcCCC
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EF-VNSKNCGDKSVSQIIIDMTDGG  272 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~v-v~~~~~~~~~~~~~i~~~~~~g  272 (362)
                      ..+|++||=+|+|. |.+++..++ +|+++|+++|.++.-.+.+++    .|.. .+ +...    .+.       ..+.
T Consensus       159 ~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~----~~~-------~~~~  225 (295)
T PF06325_consen  159 VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLS----EDL-------VEGK  225 (295)
T ss_dssp             SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCT----SCT-------CCS-
T ss_pred             ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEe----ccc-------cccc
Confidence            57889999998754 555555455 488899999999887666553    2321 22 2111    111       1247


Q ss_pred             ccEEEEcCCCHH---HHHHHHHHhccCCceEEEEccCC
Q 018022          273 ADYCFECVGLAS---LVQEAYACCRKGWGKTIVLGVDQ  307 (362)
Q Consensus       273 ~d~vid~~g~~~---~~~~~~~~l~~~~G~iv~~G~~~  307 (362)
                      ||+|+-..-...   ....+.+.++++ |.+++.|...
T Consensus       226 ~dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~  262 (295)
T PF06325_consen  226 FDLVVANILADVLLELAPDIASLLKPG-GYLILSGILE  262 (295)
T ss_dssp             EEEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEG
T ss_pred             CCEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccH
Confidence            999997766553   244667789998 9999999863

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=95.91  E-value=0.043  Score=54.86  Aligned_cols=78  Identities=24%  Similarity=0.332  Sum_probs=55.9

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc---------------------hHHHHHHhcCCcEEEcCCCCCCc
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS---------------------EKFEIGKRFGVTEFVNSKNCGDK  259 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~---------------------~~~~~~~~~g~~~vv~~~~~~~~  259 (362)
                      .+++|+|+|+|+.|+.++..++..|+ .|++++..+                     ...+.++++|++..++..-.  .
T Consensus       140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~--~  216 (467)
T TIGR01318       140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVG--R  216 (467)
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeC--C
Confidence            67899999999999999999999999 788887654                     24567788898765554220  1


Q ss_pred             cHHHHHHhhcCCCccEEEEcCCCHH
Q 018022          260 SVSQIIIDMTDGGADYCFECVGLAS  284 (362)
Q Consensus       260 ~~~~~i~~~~~~g~d~vid~~g~~~  284 (362)
                      ++  .+.++. .++|.||.++|...
T Consensus       217 ~~--~~~~~~-~~~D~vilAtGa~~  238 (467)
T TIGR01318       217 DI--SLDDLL-EDYDAVFLGVGTYR  238 (467)
T ss_pred             cc--CHHHHH-hcCCEEEEEeCCCC
Confidence            11  111221 26999999999753

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PRK09291 short chain dehydrogenase; Provisional

Probab=95.91  E-value=0.052  Score=49.08  Aligned_cols=74  Identities=16%  Similarity=0.185  Sum_probs=50.4

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EE--EcCCCCCCccHHHHHHhhcCCCc
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EF--VNSKNCGDKSVSQIIIDMTDGGA  273 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~v--v~~~~~~~~~~~~~i~~~~~~g~  273 (362)
                      +.++||+|+ |.+|...++.+...|+ +|+++.++.++.+.+.+    .+.. .+  .|..+      .+.+.+...+++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~------~~~~~~~~~~~i   74 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD------AIDRAQAAEWDV   74 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC------HHHHHHHhcCCC
Confidence            357999998 9999999999999999 99999988776554432    2322 12  23222      223333333479


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        75 d~vi~~ag~   83 (257)
T PRK09291         75 DVLLNNAGI   83 (257)
T ss_pred             CEEEECCCc
Confidence            999999873

>PRK07478 short chain dehydrogenase; Provisional

Probab=95.90  E-value=0.047  Score=49.42  Aligned_cols=81  Identities=19%  Similarity=0.201  Sum_probs=52.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EEcCCCCCCccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      .+.+++|+|+ |++|.+.+..+...|+ +|+.+++++++++.+.    +.+... ++..+-..++.+.+.+.+...  +.
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG   83 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            3678999998 9999999999989999 8999998887765442    233222 222111012223333333322  27


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        84 id~li~~ag~   93 (254)
T PRK07478         84 LDIAFNNAGT   93 (254)
T ss_pred             CCEEEECCCC
Confidence            9999999874

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.90  E-value=0.083  Score=45.11  Aligned_cols=96  Identities=20%  Similarity=0.228  Sum_probs=63.3

Q ss_pred             hccccchhhhHHHHHHhcCCCCCCEEEEECCCh-HHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCC
Q 018022          180 CLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGD  258 (362)
Q Consensus       180 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~-~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~  258 (362)
                      ...++...++...+.....--.+.+|+|+|+|. +|..++..+...|+ +|+++.++.                      
T Consensus        22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~----------------------   78 (168)
T cd01080          22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKT----------------------   78 (168)
T ss_pred             CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCc----------------------
Confidence            334444344444333333345789999999987 59989999999999 788887652                      


Q ss_pred             ccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022          259 KSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       259 ~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      +++.+.+.     .+|+||-+++.++.+..-  .++++ -.++.++..
T Consensus        79 ~~l~~~l~-----~aDiVIsat~~~~ii~~~--~~~~~-~viIDla~p  118 (168)
T cd01080          79 KNLKEHTK-----QADIVIVAVGKPGLVKGD--MVKPG-AVVIDVGIN  118 (168)
T ss_pred             hhHHHHHh-----hCCEEEEcCCCCceecHH--HccCC-eEEEEccCC
Confidence            12333333     389999999997744432  46665 677788874

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK06953 short chain dehydrogenase; Provisional

Probab=95.87  E-value=0.063  Score=47.59  Aligned_cols=77  Identities=19%  Similarity=0.249  Sum_probs=52.9

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE-EEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .+++|+|+ |.+|...++.+...|+ +|+.++++.++.+.++..+... ..|-.+  .+.+.+.+.++.++++|++|.+.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~d~vi~~a   78 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD--PASVAGLAWKLDGEALDAAVYVA   78 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC--HHHHHHHHHHhcCCCCCEEEECC
Confidence            46899987 9999999988888899 8999999888877776665432 223322  12333333333333799999988


Q ss_pred             CC
Q 018022          281 GL  282 (362)
Q Consensus       281 g~  282 (362)
                      |.
T Consensus        79 g~   80 (222)
T PRK06953         79 GV   80 (222)
T ss_pred             Cc
Confidence            75

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=95.84  E-value=0.087  Score=45.21  Aligned_cols=94  Identities=14%  Similarity=0.239  Sum_probs=63.0

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  282 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~  282 (362)
                      +|.|+|| |.+|...++=|+.+|. .|+++.|+++|+...+..-   ++.-+-   -++.+....+.  |+|+||++.|.
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~---i~q~Di---fd~~~~a~~l~--g~DaVIsA~~~   72 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVT---ILQKDI---FDLTSLASDLA--GHDAVISAFGA   72 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccce---eecccc---cChhhhHhhhc--CCceEEEeccC
Confidence            6889998 9999999999999999 9999999999986653321   111111   11111111222  79999999886


Q ss_pred             H---------HHHHHHHHHhccC-CceEEEEccC
Q 018022          283 A---------SLVQEAYACCRKG-WGKTIVLGVD  306 (362)
Q Consensus       283 ~---------~~~~~~~~~l~~~-~G~iv~~G~~  306 (362)
                      .         ...+.++..++.- --|+..+|+-
T Consensus        73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGA  106 (211)
T COG2910          73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGGA  106 (211)
T ss_pred             CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence            5         2244567777763 2488888864

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=95.83  E-value=0.054  Score=49.29  Aligned_cols=78  Identities=21%  Similarity=0.253  Sum_probs=50.4

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-h---cCCcEEEcCCCCCCccHHHHHHhhcC--CCccEE
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-R---FGVTEFVNSKNCGDKSVSQIIIDMTD--GGADYC  276 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~---~g~~~vv~~~~~~~~~~~~~i~~~~~--~g~d~v  276 (362)
                      ++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +   .+..+.+..+-.+.+++.+.+.+...  +++|++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            6899998 9999999999989999 8999999887765432 2   23222232221012333344433322  379999


Q ss_pred             EEcCCC
Q 018022          277 FECVGL  282 (362)
Q Consensus       277 id~~g~  282 (362)
                      |.+.|.
T Consensus        81 i~naG~   86 (259)
T PRK08340         81 VWNAGN   86 (259)
T ss_pred             EECCCC
Confidence            999884

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=95.82  E-value=0.075  Score=51.65  Aligned_cols=90  Identities=23%  Similarity=0.316  Sum_probs=58.5

Q ss_pred             EEEECCChHHHHHHHHHHHcCCC-EEEEEcCCchHHHHHHh--cC--Cc-EEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          205 VVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKR--FG--VT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       205 vlI~Gag~~G~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~--~g--~~-~vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      |+|+|+|.+|..+++.+....-. +|++.+++.++.+.+.+  .+  +. ..+|..+      .+.+.++.. +.|+||+
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~------~~~l~~~~~-~~dvVin   73 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND------PESLAELLR-GCDVVIN   73 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT------HHHHHHHHT-TSSEEEE
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC------HHHHHHHHh-cCCEEEE
Confidence            68899999999999999877643 89999999999877653  22  22 2334333      233555544 4799999


Q ss_pred             cCCCHHHHHHHHHHhccCCceEEE
Q 018022          279 CVGLASLVQEAYACCRKGWGKTIV  302 (362)
Q Consensus       279 ~~g~~~~~~~~~~~l~~~~G~iv~  302 (362)
                      |+|.......+..+++.+ -.++.
T Consensus        74 ~~gp~~~~~v~~~~i~~g-~~yvD   96 (386)
T PF03435_consen   74 CAGPFFGEPVARACIEAG-VHYVD   96 (386)
T ss_dssp             -SSGGGHHHHHHHHHHHT--EEEE
T ss_pred             CCccchhHHHHHHHHHhC-CCeec
Confidence            999765455566666665 56666

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PLN02780 ketoreductase/ oxidoreductase

Probab=95.81  E-value=0.051  Score=51.47  Aligned_cols=80  Identities=19%  Similarity=0.189  Sum_probs=53.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-----cCCcE----EEcCCCCCCccHHHHHHhhcC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVTE----FVNSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~g~~~----vv~~~~~~~~~~~~~i~~~~~  270 (362)
                      .|.+++|+|+ +++|.+.+..+...|+ +|+.+++++++++.+.+     .+...    .+|-.+ ...+..+.+.+..+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~l~~~~~  129 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG-DIDEGVKRIKETIE  129 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC-CcHHHHHHHHHHhc
Confidence            5889999998 9999998888888899 89999999988765432     12111    223221 01233444555444


Q ss_pred             C-CccEEEEcCCC
Q 018022          271 G-GADYCFECVGL  282 (362)
Q Consensus       271 ~-g~d~vid~~g~  282 (362)
                      + .+|++|+++|.
T Consensus       130 ~~didilVnnAG~  142 (320)
T PLN02780        130 GLDVGVLINNVGV  142 (320)
T ss_pred             CCCccEEEEecCc
Confidence            4 57799998873

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=95.79  E-value=0.13  Score=46.73  Aligned_cols=102  Identities=16%  Similarity=0.134  Sum_probs=61.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC-cEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      .+.+|||+|+ |.+|...+..+...|+ +|+++.++.++.......+. -.++..+-   .+..+.+.+....++|+||.
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl---~d~~~~l~~~~~~~~d~vi~   91 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADV---TEGSDKLVEAIGDDSDAVIC   91 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeC---CCCHHHHHHHhhcCCCEEEE
Confidence            3578999998 9999999998888898 89998888776544322121 12222111   11112233322126999999


Q ss_pred             cCCCHH-------------HHHHHHHHhccC-CceEEEEccC
Q 018022          279 CVGLAS-------------LVQEAYACCRKG-WGKTIVLGVD  306 (362)
Q Consensus       279 ~~g~~~-------------~~~~~~~~l~~~-~G~iv~~G~~  306 (362)
                      +.|...             ....+++.+... .+++++++..
T Consensus        92 ~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~  133 (251)
T PLN00141         92 ATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI  133 (251)
T ss_pred             CCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence            877421             133455555543 1578887653

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.79  E-value=0.17  Score=45.39  Aligned_cols=81  Identities=16%  Similarity=0.148  Sum_probs=49.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEE-EcCCchHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIG-VDVISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~-~~~~~~~~~~~----~~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      ++.++||+|+ |.+|+..+..+...|+ +|++ ..++.++.+.+    +..+.. .++..+-.+.+++...+.+...  +
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4578999998 9999999999999999 6554 56666554332    233432 2222221112333333333321  3


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus        82 ~id~vi~~ag~   92 (250)
T PRK08063         82 RLDVFVNNAAS   92 (250)
T ss_pred             CCCEEEECCCC
Confidence            68999998874

>PRK07340 ornithine cyclodeaminase; Validated

Probab=95.79  E-value=0.048  Score=51.29  Aligned_cols=103  Identities=13%  Similarity=0.026  Sum_probs=70.3

Q ss_pred             CCCCEEEEECCChHHHHHHHHHH-HcCCCEEEEEcCCchHHHHH-HhcCCc--EEEcCCCCCCccHHHHHHhhcCCCccE
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIG-KRFGVT--EFVNSKNCGDKSVSQIIIDMTDGGADY  275 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~-~~g~~~vi~~~~~~~~~~~~-~~~g~~--~vv~~~~~~~~~~~~~i~~~~~~g~d~  275 (362)
                      ....+++|+|+|..|.+.+..+. ..+.++|.+.+++.++.+.+ +++...  .+. .     .+..+.+.     .+|+
T Consensus       123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~-----~~~~~av~-----~aDi  191 (304)
T PRK07340        123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P-----LDGEAIPE-----AVDL  191 (304)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E-----CCHHHHhh-----cCCE
Confidence            46678999999999999888886 47888999999998886654 344311  111 1     22333342     5999


Q ss_pred             EEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH
Q 018022          276 CFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF  317 (362)
Q Consensus       276 vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~  317 (362)
                      |+.|++++..+-..  .++++ -.++.+|.+.+.+ -+++..
T Consensus       192 VitaT~s~~Pl~~~--~~~~g-~hi~~iGs~~p~~-~El~~~  229 (304)
T PRK07340        192 VVTATTSRTPVYPE--AARAG-RLVVAVGAFTPDM-AELAPR  229 (304)
T ss_pred             EEEccCCCCceeCc--cCCCC-CEEEecCCCCCCc-ccCCHH
Confidence            99999977533333  37886 7888999865433 466644

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.76  E-value=0.027  Score=52.16  Aligned_cols=44  Identities=34%  Similarity=0.341  Sum_probs=40.1

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR  244 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~  244 (362)
                      ++++++|.|+|+.+.+++..++..|+.+++++.|+.+|.+.+.+
T Consensus       125 ~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~  168 (283)
T COG0169         125 TGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD  168 (283)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            57999999999999999999999998899999999999777654

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.75  E-value=0.24  Score=45.53  Aligned_cols=103  Identities=16%  Similarity=0.212  Sum_probs=61.5

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch-------------------HH----HHHHhcCCc-EEEcCCCC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-------------------KF----EIGKRFGVT-EFVNSKNC  256 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~-------------------~~----~~~~~~g~~-~vv~~~~~  256 (362)
                      ...+|+|+|+|++|..++..+.+.|+.+++.+|.+.-                   |.    +.+.+++.. +|....+ 
T Consensus        29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~-  107 (268)
T PRK15116         29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDD-  107 (268)
T ss_pred             cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEec-
Confidence            4578999999999999999999999889999886521                   11    122233332 1221111 


Q ss_pred             CCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022          257 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       257 ~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                        .-..+.+.++....+|+||||++....-..+.+.+...+=.++..|..
T Consensus       108 --~i~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGa  155 (268)
T PRK15116        108 --FITPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGA  155 (268)
T ss_pred             --ccChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCc
Confidence              000122333333369999999998654445555555541345555543

>PRK07574 formate dehydrogenase; Provisional

Probab=95.74  E-value=0.097  Score=50.78  Aligned_cols=45  Identities=31%  Similarity=0.355  Sum_probs=36.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG  246 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g  246 (362)
                      .|.+|.|+|.|.+|+..++.++..|. +|++.+++....+..+.++
T Consensus       191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g  235 (385)
T PRK07574        191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELG  235 (385)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcC
Confidence            56789999999999999999999999 9999998763333333333

>PRK06484 short chain dehydrogenase; Validated

Probab=95.74  E-value=0.15  Score=51.42  Aligned_cols=79  Identities=16%  Similarity=0.272  Sum_probs=55.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCcE---EEcCCCCCCccHHHHHHhhcC--CCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTE---FVNSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~~---vv~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|+.++++.++++.+ ++++...   ..|-.+  ++++.+.+.++..  +++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i   80 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD--EAQIREGFEQLHREFGRI   80 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence            5788999998 9999999999999999 999999988877654 4455432   223222  2334444444322  379


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        81 D~li~nag~   89 (520)
T PRK06484         81 DVLVNNAGV   89 (520)
T ss_pred             CEEEECCCc
Confidence            999999874

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.74  E-value=0.042  Score=51.06  Aligned_cols=76  Identities=13%  Similarity=0.013  Sum_probs=52.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCc-EEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~-~vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      .+.+++|+|+|+.+.+++..+..+|+++|+++.|+.+|.+.+. .++.. .+....      ..+.+.+.. ..+|+||+
T Consensus       124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~------~~~~~~~~~-~~~DiVIn  196 (282)
T TIGR01809       124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE------GDSGGLAIE-KAAEVLVS  196 (282)
T ss_pred             CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc------chhhhhhcc-cCCCEEEE
Confidence            5778999999999999999999999989999999988876653 34321 111110      001111111 25899999


Q ss_pred             cCCCH
Q 018022          279 CVGLA  283 (362)
Q Consensus       279 ~~g~~  283 (362)
                      |++..
T Consensus       197 aTp~g  201 (282)
T TIGR01809       197 TVPAD  201 (282)
T ss_pred             CCCCC
Confidence            98865

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.73  E-value=0.068  Score=48.04  Aligned_cols=81  Identities=21%  Similarity=0.273  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEEcCCCCCCccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      ++.++||+|+ |++|+..++.+...|+ +|+.++++.++.+.+.    ..+.. ..+..+-.+...+.+.+.+...  ++
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4779999998 9999999999999999 8999998887655432    23432 1222211001233333333322  36


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|.+|.+.|.
T Consensus        83 id~vi~~ag~   92 (253)
T PRK08217         83 LNGLINNAGI   92 (253)
T ss_pred             CCEEEECCCc
Confidence            8999999873

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.73  E-value=0.025  Score=44.13  Aligned_cols=91  Identities=21%  Similarity=0.283  Sum_probs=60.6

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .+.+|||+|+|.+|..-++.+...|+ +|++++...   +..+  +.-....      ..+.    +.. .++|.||.++
T Consensus         6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~~------~~~~----~~l-~~~~lV~~at   68 (103)
T PF13241_consen    6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLIR------REFE----EDL-DGADLVFAAT   68 (103)
T ss_dssp             TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEEE------SS-G----GGC-TTESEEEE-S
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHHh------hhHH----HHH-hhheEEEecC
Confidence            46789999999999999999999998 999998775   2222  2212221      1121    111 1699999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEccCCCC
Q 018022          281 GLASLVQEAYACCRKGWGKTIVLGVDQPG  309 (362)
Q Consensus       281 g~~~~~~~~~~~l~~~~G~iv~~G~~~~~  309 (362)
                      +.+..-+.+....+.. |.++.....+..
T Consensus        69 ~d~~~n~~i~~~a~~~-~i~vn~~D~p~~   96 (103)
T PF13241_consen   69 DDPELNEAIYADARAR-GILVNVVDDPEL   96 (103)
T ss_dssp             S-HHHHHHHHHHHHHT-TSEEEETT-CCC
T ss_pred             CCHHHHHHHHHHHhhC-CEEEEECCCcCC
Confidence            9988566777777776 899988764433

>PRK05875 short chain dehydrogenase; Provisional

Probab=95.70  E-value=0.063  Score=49.22  Aligned_cols=81  Identities=20%  Similarity=0.258  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hc---C--Cc-EEEcCCCCCCccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF---G--VT-EFVNSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~---g--~~-~vv~~~~~~~~~~~~~i~~~~~--  270 (362)
                      ++.++||+|+ |.+|...++.+...|+ +|+.++++.++.+... ++   +  .. .++..+-.++.++.+.+.+...  
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH   84 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3679999998 9999999999999999 8999998876654332 21   1  11 2221111012333333333321  


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +++|++|.+.|.
T Consensus        85 ~~~d~li~~ag~   96 (276)
T PRK05875         85 GRLHGVVHCAGG   96 (276)
T ss_pred             CCCCEEEECCCc
Confidence            268999999873

>PRK09072 short chain dehydrogenase; Provisional

Probab=95.70  E-value=0.076  Score=48.36  Aligned_cols=81  Identities=23%  Similarity=0.320  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c--CC-cEEEcCCCCCCccHHHHHHhhc-CCCcc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F--GV-TEFVNSKNCGDKSVSQIIIDMT-DGGAD  274 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~--g~-~~vv~~~~~~~~~~~~~i~~~~-~~g~d  274 (362)
                      ++.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ +  +. .+.+..+-.+.+.+.+.+.... .+.+|
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id   82 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN   82 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            4678999997 9999999998888999 89999998877655532 2  21 1222211101122222222221 23789


Q ss_pred             EEEEcCCC
Q 018022          275 YCFECVGL  282 (362)
Q Consensus       275 ~vid~~g~  282 (362)
                      ++|.+.|.
T Consensus        83 ~lv~~ag~   90 (263)
T PRK09072         83 VLINNAGV   90 (263)
T ss_pred             EEEECCCC
Confidence            99999885

>PRK07454 short chain dehydrogenase; Provisional

Probab=95.70  E-value=0.076  Score=47.57  Aligned_cols=82  Identities=18%  Similarity=0.180  Sum_probs=52.5

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EEEcCCCCCCccHHHHHHhhcC--C
Q 018022          200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      ....+++|+|+ |.+|...+..+...|. +|++++++.++.+.+.+    .+.. .++.-+-.+.+++...+.+...  +
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            34578999998 9999999999999999 99999998876654432    2221 1222211012333333333321  2


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      .+|++|.+.|.
T Consensus        83 ~id~lv~~ag~   93 (241)
T PRK07454         83 CPDVLINNAGM   93 (241)
T ss_pred             CCCEEEECCCc
Confidence            69999999984

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.69  E-value=0.026  Score=55.95  Aligned_cols=94  Identities=12%  Similarity=0.103  Sum_probs=67.0

Q ss_pred             HhcCCCCCCEEE----EECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc-EEEcCCCCCCccHHHHHHhh
Q 018022          195 RTANVEVGSTVV----IFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       195 ~~~~~~~g~~vl----I~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~i~~~  268 (362)
                      ...++++|+.+|    |+|+ |++|.+++|+++..|+ .|+++.....+....+..+.+ .+++...   ..+.+.+...
T Consensus        27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~l~~~  102 (450)
T PRK08261         27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG---ITDPADLKAL  102 (450)
T ss_pred             cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC---CCCHHHHHHH
Confidence            345678888887    7765 9999999999999999 999887766655444455555 3566554   3344444433


Q ss_pred             cCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCC
Q 018022          269 TDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ  307 (362)
Q Consensus       269 ~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~  307 (362)
                      .              ..+...++.|.++ |+++.++...
T Consensus       103 ~--------------~~~~~~l~~l~~~-griv~i~s~~  126 (450)
T PRK08261        103 Y--------------EFFHPVLRSLAPC-GRVVVLGRPP  126 (450)
T ss_pred             H--------------HHHHHHHHhccCC-CEEEEEcccc
Confidence            1              3367788889997 9999998753

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=95.69  E-value=0.18  Score=45.90  Aligned_cols=102  Identities=19%  Similarity=0.278  Sum_probs=61.1

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHcCCCEEEEEcCCc------hHHHHHHhcCC-cEEE--cCCCCCCccHHHHHHhh
Q 018022          201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVIS------EKFEIGKRFGV-TEFV--NSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       201 ~g~~vlI~Ga---g~~G~~a~~la~~~g~~~vi~~~~~~------~~~~~~~~~g~-~~vv--~~~~~~~~~~~~~i~~~  268 (362)
                      .+.+++|+|+   +++|++.++.+...|+ +|+.+.++.      +..+.+.+.+. ...+  |-.+  .++..+.+.+.
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~   81 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQD--DAQIEETFETI   81 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCC--HHHHHHHHHHH
Confidence            4678999996   4899999999888999 777765332      22333322221 1222  2222  23333333333


Q ss_pred             cC--CCccEEEEcCCCH-----------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          269 TD--GGADYCFECVGLA-----------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       269 ~~--~g~d~vid~~g~~-----------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      ..  +.+|++|.+.|..                             ...+.++..|+.+ |+|+.++..
T Consensus        82 ~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~  149 (258)
T PRK07370         82 KQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYL  149 (258)
T ss_pred             HHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEecc
Confidence            22  3799999998831                             0124566677776 999988754

>PRK05854 short chain dehydrogenase; Provisional

Probab=95.67  E-value=0.071  Score=50.24  Aligned_cols=79  Identities=18%  Similarity=0.170  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hc-----CCc-EEE--cCCCCCCccHHHHHHhhcC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF-----GVT-EFV--NSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~-----g~~-~vv--~~~~~~~~~~~~~i~~~~~  270 (362)
                      .+.+++|+|+ +++|.+++..+...|+ +|+.++++.++.+.+. ++     +.. .++  |-.+  .+++.+.+.++..
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d--~~sv~~~~~~~~~   89 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS--LASVAALGEQLRA   89 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC--HHHHHHHHHHHHH
Confidence            4678999998 9999999998888999 9999999887655432 11     111 122  3222  1223333333322


Q ss_pred             --CCccEEEEcCCC
Q 018022          271 --GGADYCFECVGL  282 (362)
Q Consensus       271 --~g~d~vid~~g~  282 (362)
                        +.+|++|.+.|.
T Consensus        90 ~~~~iD~li~nAG~  103 (313)
T PRK05854         90 EGRPIHLLINNAGV  103 (313)
T ss_pred             hCCCccEEEECCcc
Confidence              268999998874

>PRK06940 short chain dehydrogenase; Provisional

Probab=95.67  E-value=0.17  Score=46.62  Aligned_cols=99  Identities=21%  Similarity=0.323  Sum_probs=60.9

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEE--cCCCCCCccHHHHHHhhc-CCCc
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMT-DGGA  273 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv--~~~~~~~~~~~~~i~~~~-~~g~  273 (362)
                      +.+++|+|+|++|.+.+..+. .|. +|+.++++.++++.+.    ..+.. .++  |-.+  .+.+.+.+.+.. -+++
T Consensus         2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~i~~~~~~~~~~g~i   77 (275)
T PRK06940          2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS--RESVKALAATAQTLGPV   77 (275)
T ss_pred             CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHhcCCC
Confidence            357889999999999888874 788 9999998877654432    22322 122  3222  233333333321 1379


Q ss_pred             cEEEEcCCCHH------------------HHHHHHHHhccCCceEEEEcc
Q 018022          274 DYCFECVGLAS------------------LVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       274 d~vid~~g~~~------------------~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      |++|.+.|...                  .++.++..++.+ |++++++.
T Consensus        78 d~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-g~iv~isS  126 (275)
T PRK06940         78 TGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPG-GAGVVIAS  126 (275)
T ss_pred             CEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhC-CCEEEEEe
Confidence            99999998531                  133445566665 77777654

>PRK05717 oxidoreductase; Validated

Probab=95.66  E-value=0.068  Score=48.44  Aligned_cols=79  Identities=19%  Similarity=0.237  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCc-EEE--cCCCCCCccHHHHHHhhcC--CCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~-~vv--~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      .|.+++|+|+ |.+|...+..+...|+ +|+.++++.++.+.+ ++++.. ..+  |-.+  ..++.+.+.++..  +.+
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i   85 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD--EAQVAAGVAEVLGQFGRL   85 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence            4678999998 9999999999988998 899998877665443 344422 122  2222  1233333333322  268


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        86 d~li~~ag~   94 (255)
T PRK05717         86 DALVCNAAI   94 (255)
T ss_pred             CEEEECCCc
Confidence            999998884

>PRK07402 precorrin-6B methylase; Provisional

Probab=95.66  E-value=0.21  Score=43.63  Aligned_cols=103  Identities=21%  Similarity=0.394  Sum_probs=63.5

Q ss_pred             HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcE--EEcCCCCCCccHHHHHHh
Q 018022          194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIIID  267 (362)
Q Consensus       194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~--vv~~~~~~~~~~~~~i~~  267 (362)
                      ....+++++++||=.|+|. |..+..+++.....+|++++.+++..+.+++    ++...  ++..      +..+.+..
T Consensus        33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~------d~~~~~~~  105 (196)
T PRK07402         33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG------SAPECLAQ  105 (196)
T ss_pred             HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC------chHHHHhh
Confidence            4556778899988888744 4455555655433399999999988877654    45432  3322      22222222


Q ss_pred             hcCCCcc-EEEEcCCC-HHHHHHHHHHhccCCceEEEEcc
Q 018022          268 MTDGGAD-YCFECVGL-ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       268 ~~~~g~d-~vid~~g~-~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      +. ..+| ++++.... ...++.+.+.|+++ |+++....
T Consensus       106 ~~-~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~  143 (196)
T PRK07402        106 LA-PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS  143 (196)
T ss_pred             CC-CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence            22 2234 44443222 35678899999998 99988854

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=95.64  E-value=0.11  Score=48.22  Aligned_cols=44  Identities=23%  Similarity=0.216  Sum_probs=38.1

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK  243 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~  243 (362)
                      ..+.+++|+|+|+.+++++..+...|+++++++.|+.+|.+.+.
T Consensus       125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La  168 (283)
T PRK14027        125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA  168 (283)
T ss_pred             cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence            34678999999999999999888899989999999988876654

>PRK06194 hypothetical protein; Provisional

Probab=95.64  E-value=0.071  Score=49.22  Aligned_cols=80  Identities=21%  Similarity=0.287  Sum_probs=50.9

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hc---CCcE-EEcCCCCCCccHHHHHHhhc--CCCc
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF---GVTE-FVNSKNCGDKSVSQIIIDMT--DGGA  273 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~---g~~~-vv~~~~~~~~~~~~~i~~~~--~~g~  273 (362)
                      +.++||+|+ |++|...++.+...|+ +|++++++.++++.+. ++   +... ++..+-.+.+++.+.+.+..  .+++
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   84 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV   84 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            578999998 9999999999988999 8999998876654432 22   3321 22222101123333333321  1368


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        85 d~vi~~Ag~   93 (287)
T PRK06194         85 HLLFNNAGV   93 (287)
T ss_pred             CEEEECCCC
Confidence            999999885

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=95.63  E-value=0.027  Score=52.08  Aligned_cols=98  Identities=19%  Similarity=0.293  Sum_probs=61.5

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc---EEEcCCCCCCccHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT---EFVNSKNCGDKSVSQII  265 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~---~vv~~~~~~~~~~~~~i  265 (362)
                      +.+.+++++|++||-+|+| -|..+..+|+..|+ +|++++.+++..+.++    +.|..   .+..-      ++    
T Consensus        54 ~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~------D~----  121 (273)
T PF02353_consen   54 LCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQ------DY----  121 (273)
T ss_dssp             HHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-------G----
T ss_pred             HHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe------ec----
Confidence            5688899999999999997 47777788888899 9999999998887765    45542   22221      11    


Q ss_pred             HhhcCCCccEEEE-----cCCC---HHHHHHHHHHhccCCceEEEEc
Q 018022          266 IDMTDGGADYCFE-----CVGL---ASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       266 ~~~~~~g~d~vid-----~~g~---~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      +++. +.||.|+-     .+|.   +..++.+.+.|+|+ |++++-.
T Consensus       122 ~~~~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~  166 (273)
T PF02353_consen  122 RDLP-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQT  166 (273)
T ss_dssp             GG----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEE
T ss_pred             cccC-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEe
Confidence            1222 26898875     3442   24578899999998 9987543

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.61  E-value=0.089  Score=51.15  Aligned_cols=96  Identities=17%  Similarity=0.194  Sum_probs=67.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHH-HHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE-IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      =.+.++||+|+|-+|..++..+...|+.+|++..|+.+|.+ +++++|.. ++..+     ++.+.+.     .+|+||-
T Consensus       176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~-----el~~~l~-----~~DvVis  244 (414)
T COG0373         176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALE-----ELLEALA-----EADVVIS  244 (414)
T ss_pred             cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHH-----HHHHhhh-----hCCEEEE
Confidence            36788999999999999999999999889999999998865 46778843 33222     2333332     4999999


Q ss_pred             cCCCHHHH---HHHHHHhccCCc-eEEEEccC
Q 018022          279 CVGLASLV---QEAYACCRKGWG-KTIVLGVD  306 (362)
Q Consensus       279 ~~g~~~~~---~~~~~~l~~~~G-~iv~~G~~  306 (362)
                      +++.+..+   ......++.... -++.++.+
T Consensus       245 sTsa~~~ii~~~~ve~a~~~r~~~livDiavP  276 (414)
T COG0373         245 STSAPHPIITREMVERALKIRKRLLIVDIAVP  276 (414)
T ss_pred             ecCCCccccCHHHHHHHHhcccCeEEEEecCC
Confidence            99987422   244555555412 35667763

>PRK08643 acetoin reductase; Validated

Probab=95.61  E-value=0.07  Score=48.29  Aligned_cols=78  Identities=19%  Similarity=0.244  Sum_probs=50.9

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcE-EE--cCCCCCCccHHHHHHhhcC--C
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE-FV--NSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~-vv--~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      +.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.+    .+... .+  |-.+  ++.+.+.+.+...  +
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~   78 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD--RDQVFAAVRQVVDTFG   78 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence            468999998 9999999999999999 89999988776544322    23221 22  2222  2333333333321  3


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus        79 ~id~vi~~ag~   89 (256)
T PRK08643         79 DLNVVVNNAGV   89 (256)
T ss_pred             CCCEEEECCCC
Confidence            69999999874

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=95.61  E-value=0.038  Score=51.25  Aligned_cols=95  Identities=17%  Similarity=0.103  Sum_probs=60.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      ..+.+++|+|+|++|.+++..+...|+.+|+++.|+.++.+.+. .++....+.. .   .+..+.+     ..+|+||+
T Consensus       121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~---~~~~~~~-----~~~DivIn  191 (278)
T PRK00258        121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D---LELQEEL-----ADFDLIIN  191 (278)
T ss_pred             CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c---ccchhcc-----ccCCEEEE
Confidence            35678999999999999999999999669999999988876654 3432110111 1   0111111     25899999


Q ss_pred             cCCCHHH-----HHHHHHHhccCCceEEEEc
Q 018022          279 CVGLASL-----VQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       279 ~~g~~~~-----~~~~~~~l~~~~G~iv~~G  304 (362)
                      |++....     .......+.++ ..++.+-
T Consensus       192 aTp~g~~~~~~~~~~~~~~l~~~-~~v~Div  221 (278)
T PRK00258        192 ATSAGMSGELPLPPLPLSLLRPG-TIVYDMI  221 (278)
T ss_pred             CCcCCCCCCCCCCCCCHHHcCCC-CEEEEee
Confidence            9885431     01123566665 6666663

>PRK06138 short chain dehydrogenase; Provisional

Probab=95.60  E-value=0.073  Score=47.92  Aligned_cols=81  Identities=21%  Similarity=0.192  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c--CCc-EEEcCCCCCCccHHHHHHhhcC--CCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F--GVT-EFVNSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~--g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      ++.+++|+|+ |.+|...++.+...|+ +|+.+.++.++.+...+ +  +.. .++..+-.++..+.+.+.+...  +++
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   82 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL   82 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999998 9999999988888898 89999988776544332 2  221 2222221112333333333321  379


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        83 d~vi~~ag~   91 (252)
T PRK06138         83 DVLVNNAGF   91 (252)
T ss_pred             CEEEECCCC
Confidence            999999884

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=95.60  E-value=0.12  Score=45.11  Aligned_cols=76  Identities=26%  Similarity=0.307  Sum_probs=51.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c----CCcE-EEcCCCCCCccHHHHHHhhcCCCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GVTE-FVNSKNCGDKSVSQIIIDMTDGGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~----g~~~-vv~~~~~~~~~~~~~i~~~~~~g~  273 (362)
                      .+.+++|+|+ |.+|.+++..+...|. +|+.+.++.++.+.+.+ +    +... ..+..+  .+++.+.+    . ++
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~----~-~~   98 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD--DAARAAAI----K-GA   98 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC--HHHHHHHH----h-cC
Confidence            5678999997 9999998888888887 99999998887665432 2    2221 122222  12222222    2 58


Q ss_pred             cEEEEcCCCHH
Q 018022          274 DYCFECVGLAS  284 (362)
Q Consensus       274 d~vid~~g~~~  284 (362)
                      |+||.+++...
T Consensus        99 diVi~at~~g~  109 (194)
T cd01078          99 DVVFAAGAAGV  109 (194)
T ss_pred             CEEEECCCCCc
Confidence            99999988665

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.59  E-value=0.16  Score=48.07  Aligned_cols=134  Identities=13%  Similarity=0.054  Sum_probs=75.1

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-----------cCCcEEEcCCCCCCccHHHHHHhhcCC
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----------FGVTEFVNSKNCGDKSVSQIIIDMTDG  271 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----------~g~~~vv~~~~~~~~~~~~~i~~~~~~  271 (362)
                      .+|.|+|+|.+|...++.+...|+ .|++.+.+++.++.++.           .+...--....   -.+...+.+.. .
T Consensus         8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---i~~~~~l~~av-~   82 (321)
T PRK07066          8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPAR---LRFVATIEACV-A   82 (321)
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhh---ceecCCHHHHh-c
Confidence            579999999999999988889999 99999998876554322           22110000000   00111111211 2


Q ss_pred             CccEEEEcCCCHH-----HHHHHHHHhccCCceEEEEccCCCCCccccCHHHH---HhcCcEEEEeeccCCC--------
Q 018022          272 GADYCFECVGLAS-----LVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEV---LHSGKILMGSLFGGLK--------  335 (362)
Q Consensus       272 g~d~vid~~g~~~-----~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~---~~~~~~i~g~~~~~~~--------  335 (362)
                      +.|.|++++....     .+.++.+.++++  .++....+      .++...+   ..+.-++.|.++.+-.        
T Consensus        83 ~aDlViEavpE~l~vK~~lf~~l~~~~~~~--aIlaSnTS------~l~~s~la~~~~~p~R~~g~HffnP~~~~pLVEV  154 (321)
T PRK07066         83 DADFIQESAPEREALKLELHERISRAAKPD--AIIASSTS------GLLPTDFYARATHPERCVVGHPFNPVYLLPLVEV  154 (321)
T ss_pred             CCCEEEECCcCCHHHHHHHHHHHHHhCCCC--eEEEECCC------ccCHHHHHHhcCCcccEEEEecCCccccCceEEE
Confidence            6999999998653     234455566664  54444332      2233222   2334556665554421        


Q ss_pred             ------ccccHHHHHHHHHc
Q 018022          336 ------AKSDIPILLKRYMD  349 (362)
Q Consensus       336 ------~~~~l~~~l~~~~~  349 (362)
                            ..+.++.+.+++++
T Consensus       155 v~g~~T~~e~~~~~~~f~~~  174 (321)
T PRK07066        155 LGGERTAPEAVDAAMGIYRA  174 (321)
T ss_pred             eCCCCCCHHHHHHHHHHHHH
Confidence                  23556777777664

>PRK06701 short chain dehydrogenase; Provisional

Probab=95.59  E-value=0.25  Score=45.88  Aligned_cols=105  Identities=19%  Similarity=0.157  Sum_probs=62.1

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchH-HHH----HHhcCCcE-EEcCCCCCCccHHHHHHhhcC--
Q 018022          200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FEI----GKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~-~~~----~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--  270 (362)
                      -.+.++||+|+ |.+|...+..+...|+ +|+.++++.++ .+.    ++..+... ++..+-.+...+.+.+.+...  
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~  122 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL  122 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            35788999998 9999999988888999 88888776432 222    22233322 222211011233333333221  


Q ss_pred             CCccEEEEcCCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          271 GGADYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       271 ~g~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      +++|++|.+.|..                          ...+.+.+.++++ |++++++..
T Consensus       123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~-g~iV~isS~  183 (290)
T PRK06701        123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQG-SAIINTGSI  183 (290)
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhC-CeEEEEecc
Confidence            2689999988741                          1122344556676 899988753

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=95.56  E-value=0.077  Score=47.67  Aligned_cols=81  Identities=21%  Similarity=0.182  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCC-cEEEcCCCCCCccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV-TEFVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~-~~vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      ++.++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+.+    .+. .+++..+-.+...+.+.+.+...  ++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3678999998 9999999999999999 89999888876554432    222 22232221011233333333321  26


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        81 ~d~vi~~ag~   90 (250)
T TIGR03206        81 VDVLVNNAGW   90 (250)
T ss_pred             CCEEEECCCC
Confidence            8999999973

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.55  E-value=0.14  Score=42.16  Aligned_cols=92  Identities=17%  Similarity=0.298  Sum_probs=55.7

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc-------------------hHH----HHHHhcCCc-EEEcCCCCCCc
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-------------------EKF----EIGKRFGVT-EFVNSKNCGDK  259 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~-------------------~~~----~~~~~~g~~-~vv~~~~~~~~  259 (362)
                      +|+|.|+|++|...+..+.+.|..++..+|.+.                   .|.    +.++++... ++.....    
T Consensus         1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~----   76 (143)
T cd01483           1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPE----   76 (143)
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEee----
Confidence            488999999999999999999998899997552                   111    222333322 1111111    


Q ss_pred             cHHH-HHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEE
Q 018022          260 SVSQ-IIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTI  301 (362)
Q Consensus       260 ~~~~-~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv  301 (362)
                      .+.+ ...+.. .++|+||+|.........+.+.++.. +.-.
T Consensus        77 ~~~~~~~~~~~-~~~diVi~~~d~~~~~~~l~~~~~~~-~i~~  117 (143)
T cd01483          77 GISEDNLDDFL-DGVDLVIDAIDNIAVRRALNRACKEL-GIPV  117 (143)
T ss_pred             ecChhhHHHHh-cCCCEEEECCCCHHHHHHHHHHHHHc-CCCE
Confidence            1111 112222 26999999999877555566666664 5433

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=95.54  E-value=0.19  Score=45.26  Aligned_cols=74  Identities=26%  Similarity=0.312  Sum_probs=47.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc-EEE--cCCCCCCccHHHHHHhhcC--CCcc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFV--NSKNCGDKSVSQIIIDMTD--GGAD  274 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~-~vv--~~~~~~~~~~~~~i~~~~~--~g~d  274 (362)
                      .+.++||+|+ |.+|...+..+...|+ +|++++++.     ....+.. +.+  |-.+  .+.+.+.+.+...  +.+|
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id   78 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSD--AAAVAQVCQRLLAETGPLD   78 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence            4678999998 9999999999888999 899998765     1222221 122  2222  2333333333321  3689


Q ss_pred             EEEEcCCC
Q 018022          275 YCFECVGL  282 (362)
Q Consensus       275 ~vid~~g~  282 (362)
                      ++|.+.|.
T Consensus        79 ~vi~~ag~   86 (252)
T PRK08220         79 VLVNAAGI   86 (252)
T ss_pred             EEEECCCc
Confidence            99999885

>PRK08219 short chain dehydrogenase; Provisional

Probab=95.54  E-value=0.11  Score=45.88  Aligned_cols=74  Identities=15%  Similarity=0.104  Sum_probs=47.8

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcEEEcCCCCCCccHHHHHHhhcCC--CccEEEE
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDG--GADYCFE  278 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~~i~~~~~~--g~d~vid  278 (362)
                      .++||+|+ |.+|...+..+... . +|++++++.++.+.+.+ ....+++..+-   .+ .+.+.++..+  ++|.+|.
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~---~~-~~~~~~~~~~~~~id~vi~   77 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDL---TD-PEAIAAAVEQLGRLDVLVH   77 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCC---CC-HHHHHHHHHhcCCCCEEEE
Confidence            57999998 99999988877766 6 89999998877655543 22222332222   11 2233333322  6999999


Q ss_pred             cCCC
Q 018022          279 CVGL  282 (362)
Q Consensus       279 ~~g~  282 (362)
                      +.|.
T Consensus        78 ~ag~   81 (227)
T PRK08219         78 NAGV   81 (227)
T ss_pred             CCCc
Confidence            9885

>PRK06197 short chain dehydrogenase; Provisional

Probab=95.53  E-value=0.079  Score=49.55  Aligned_cols=81  Identities=17%  Similarity=0.161  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-Hhc-----CCc-EEEcCCCCCCccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF-----GVT-EFVNSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~-----g~~-~vv~~~~~~~~~~~~~i~~~~~--  270 (362)
                      .+.+++|+|+ |++|.++++.+...|+ +|++++++.++.+.+ +++     +.. .++.-+-.+.+++.+.+.++..  
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   93 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY   93 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence            5689999998 9999999998888899 899999887765432 111     111 1222111012333333444322  


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +++|++|.+.|.
T Consensus        94 ~~iD~li~nAg~  105 (306)
T PRK06197         94 PRIDLLINNAGV  105 (306)
T ss_pred             CCCCEEEECCcc
Confidence            269999999874

>PLN03139 formate dehydrogenase; Provisional

Probab=95.53  E-value=0.1  Score=50.58  Aligned_cols=45  Identities=24%  Similarity=0.300  Sum_probs=36.4

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG  246 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g  246 (362)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++....+..++.|
T Consensus       198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g  242 (386)
T PLN03139        198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETG  242 (386)
T ss_pred             CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcC
Confidence            57899999999999999999999999 8999988754444444444

>PRK07774 short chain dehydrogenase; Provisional

Probab=95.52  E-value=0.086  Score=47.44  Aligned_cols=79  Identities=25%  Similarity=0.299  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EE--EcCCCCCCccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EF--VNSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~v--v~~~~~~~~~~~~~i~~~~~--  270 (362)
                      .+.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+.+    .+.. ..  .|-.+  .+.+.+.+.+...  
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   81 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD--PDSAKAMADATVSAF   81 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence            4678999998 9999999998888998 89999988766543322    2211 12  22222  1223332332221  


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +++|++|.+.|.
T Consensus        82 ~~id~vi~~ag~   93 (250)
T PRK07774         82 GGIDYLVNNAAI   93 (250)
T ss_pred             CCCCEEEECCCC
Confidence            268999999984

>PLN02366 spermidine synthase

Probab=95.52  E-value=0.17  Score=47.68  Aligned_cols=99  Identities=15%  Similarity=0.153  Sum_probs=67.3

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc-CC------c---EEEcCCCCCCccHHHHHHhh
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GV------T---EFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-g~------~---~vv~~~~~~~~~~~~~i~~~  268 (362)
                      ....++||++|+|. |..+..+++.-+.++|.+++.+++-.+.+++. ..      +   +++.      .|..+.+++.
T Consensus        89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~------~Da~~~l~~~  161 (308)
T PLN02366         89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHI------GDGVEFLKNA  161 (308)
T ss_pred             CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEE------ChHHHHHhhc
Confidence            35678999998866 55667778776777999999998888888763 21      1   1221      2333444443


Q ss_pred             cCCCccEEEEcCCC----------HHHHHHHHHHhccCCceEEEEcc
Q 018022          269 TDGGADYCFECVGL----------ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       269 ~~~g~d~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      .++.||+||--...          ...++.+.+.|+++ |.++.-+.
T Consensus       162 ~~~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~~  207 (308)
T PLN02366        162 PEGTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQAE  207 (308)
T ss_pred             cCCCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECcC
Confidence            33479999875433          24577899999998 99987654

>PRK07035 short chain dehydrogenase; Provisional

Probab=95.52  E-value=0.081  Score=47.76  Aligned_cols=80  Identities=16%  Similarity=0.167  Sum_probs=51.0

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EEEcCCCCCCccHHHHHHhhcC--CCc
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      +.+++|+|+ |.+|.+.++.+...|+ +|+.++++.++.+.+.+    .+.. +.+..+-.+..++.+.+.+...  +.+
T Consensus         8 ~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   86 (252)
T PRK07035          8 GKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL   86 (252)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            568999998 9999999999999999 99999988776554332    2321 2222211012233333333322  268


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        87 d~li~~ag~   95 (252)
T PRK07035         87 DILVNNAAA   95 (252)
T ss_pred             CEEEECCCc
Confidence            999998873

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=95.51  E-value=0.059  Score=47.23  Aligned_cols=99  Identities=17%  Similarity=0.263  Sum_probs=62.0

Q ss_pred             HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcEEEcCCCCCCccHHHHHHhhc
Q 018022          194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~~i~~~~  269 (362)
                      .+..+..++.+||-+|+|. |..+..+++. |. +|++++.+++-++.+++    .+...+ ....   .++.+.  .+ 
T Consensus        23 ~~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~---~d~~~~--~~-   92 (197)
T PRK11207         23 LEAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV---VDLNNL--TF-   92 (197)
T ss_pred             HHhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe---cChhhC--Cc-
Confidence            3445566778999999876 7777777764 77 99999999886666553    232211 1111   111110  11 


Q ss_pred             CCCccEEEEcCCC--------HHHHHHHHHHhccCCceEEEE
Q 018022          270 DGGADYCFECVGL--------ASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       270 ~~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~  303 (362)
                      .+.||+|+....-        ...+..+.+.|+++ |.++++
T Consensus        93 ~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~  133 (197)
T PRK11207         93 DGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIV  133 (197)
T ss_pred             CCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence            2369999976431        24467888899998 986544

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=95.51  E-value=0.14  Score=46.25  Aligned_cols=103  Identities=21%  Similarity=0.255  Sum_probs=74.9

Q ss_pred             HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHh----cCCcEEEcCCCCCCccHHHHHHhh
Q 018022          194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~~i~~~  268 (362)
                      ....++.+|++|+=.|.|. |.+++-+|++.|. .+|+..+..++..+.+++    +|....+....   .|.    ++.
T Consensus        87 ~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~---~Dv----~~~  158 (256)
T COG2519          87 VARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL---GDV----REG  158 (256)
T ss_pred             HHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe---ccc----ccc
Confidence            4568999999999888765 8888888987775 499999999999888764    45433222111   222    222


Q ss_pred             cCC-CccEEEEcCCCH-HHHHHHHHHhccCCceEEEEcc
Q 018022          269 TDG-GADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       269 ~~~-g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ..+ .+|.+|=-.+.+ ..++.+.+.|+++ |.++++--
T Consensus       159 ~~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P  196 (256)
T COG2519         159 IDEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSP  196 (256)
T ss_pred             ccccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcC
Confidence            222 699888777766 6688999999998 99999964

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.49  E-value=0.41  Score=42.92  Aligned_cols=101  Identities=23%  Similarity=0.215  Sum_probs=60.0

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcC-CchHHH----HHHhcCCc-EEE--cCCCCCCccHHHHHHhhcC--
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFE----IGKRFGVT-EFV--NSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~-~~~~~~----~~~~~g~~-~vv--~~~~~~~~~~~~~i~~~~~--  270 (362)
                      +.++||+|+ |.+|...++-+...|+ +++.+.+ +.++..    .+++.+.. ..+  |-.+  +.++...+.+...  
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   82 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST--REGCETLAKATIDRY   82 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC--HHHHHHHHHHHHHHc
Confidence            578999998 9999999988888999 6665543 323222    22333322 222  2222  1223333333221  


Q ss_pred             CCccEEEEcCCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          271 GGADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       271 ~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      +++|++|.+.|..                         ...+.+.+.++.. |+++.++..
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~  142 (252)
T PRK06077         83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASV  142 (252)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcch
Confidence            2689999999841                         1133456666776 899998764

>PRK07024 short chain dehydrogenase; Provisional

Probab=95.49  E-value=0.09  Score=47.72  Aligned_cols=78  Identities=18%  Similarity=0.187  Sum_probs=51.6

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCC---cEEE--cCCCCCCccHHHHHHhhcC--CC
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGV---TEFV--NSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~---~~vv--~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      +.+++|+|+ |.+|.+.+..+...|+ +|++++++.++++.+.+ +..   ...+  |-.+  .+.+.+.+.+...  +.
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD--ADALAAAAADFIAAHGL   78 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC--HHHHHHHHHHHHHhCCC
Confidence            358999998 9999999999888999 99999998887765433 221   1122  2222  2333344333322  25


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        79 id~lv~~ag~   88 (257)
T PRK07024         79 PDVVIANAGI   88 (257)
T ss_pred             CCEEEECCCc
Confidence            8999998874

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=95.48  E-value=0.083  Score=48.53  Aligned_cols=80  Identities=26%  Similarity=0.258  Sum_probs=51.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-h---cCCc-EEEcCCCCCCccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-R---FGVT-EFVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~---~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      .+.+++|+|+ |++|++.+..+...|+ +|++++++.++.+.+. +   .+.. ..+..+-.+..++...+.+...  +.
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   87 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP   87 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999998 9999999999999999 8999998876654432 2   2322 1222211011233333333221  37


Q ss_pred             ccEEEEcCC
Q 018022          273 ADYCFECVG  281 (362)
Q Consensus       273 ~d~vid~~g  281 (362)
                      +|++|.+.|
T Consensus        88 id~li~~ag   96 (278)
T PRK08277         88 CDILINGAG   96 (278)
T ss_pred             CCEEEECCC
Confidence            999999988

>PRK12747 short chain dehydrogenase; Provisional

Probab=95.48  E-value=0.4  Score=43.24  Aligned_cols=103  Identities=18%  Similarity=0.164  Sum_probs=60.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEc-CCchHHHHH----HhcCCcE-EE--cCCCCCCcc---HHHHHHhh
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISEKFEIG----KRFGVTE-FV--NSKNCGDKS---VSQIIIDM  268 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~-~~~~~~~~~----~~~g~~~-vv--~~~~~~~~~---~~~~i~~~  268 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|+++. ++.++.+.+    ++.+... .+  |-.+  .++   +.+.+.+.
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   79 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLES--LHGVEALYSSLDNE   79 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCC--HHHHHHHHHHHHHH
Confidence            3678999998 9999999999999999 777764 444444322    2223221 11  2111  112   22222221


Q ss_pred             ----cC-CCccEEEEcCCCH-------------------------HHHHHHHHHhccCCceEEEEccCC
Q 018022          269 ----TD-GGADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVDQ  307 (362)
Q Consensus       269 ----~~-~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~~~  307 (362)
                          .+ +++|++|.+.|..                         ..++.+++.++.. |+|++++...
T Consensus        80 ~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-g~iv~isS~~  147 (252)
T PRK12747         80 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN-SRIINISSAA  147 (252)
T ss_pred             hhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC-CeEEEECCcc
Confidence                12 2699999988841                         0123456667776 9999987643

>PRK06125 short chain dehydrogenase; Provisional

Probab=95.48  E-value=0.12  Score=46.84  Aligned_cols=79  Identities=23%  Similarity=0.247  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c----CCc-EEEcCCCCCCccHHHHHHhhcCCCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GVT-EFVNSKNCGDKSVSQIIIDMTDGGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~----g~~-~vv~~~~~~~~~~~~~i~~~~~~g~  273 (362)
                      .+.+++|+|+ +++|.+.++.+...|+ +|++++++.++.+.+.+ +    +.. .++..+-...+++.+.+.+.  +.+
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~i   82 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDI   82 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCC
Confidence            4689999998 9999999998888999 99999998877655332 1    221 22222110112333333222  369


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        83 d~lv~~ag~   91 (259)
T PRK06125         83 DILVNNAGA   91 (259)
T ss_pred             CEEEECCCC
Confidence            999999884

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.47  E-value=0.072  Score=55.60  Aligned_cols=78  Identities=27%  Similarity=0.282  Sum_probs=53.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch---------------------HHHHHHhcCCcEEEcCCCCCC
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE---------------------KFEIGKRFGVTEFVNSKNCGD  258 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~---------------------~~~~~~~~g~~~vv~~~~~~~  258 (362)
                      ..+.+|+|+|+|+.|+.++..++..|+ +|+++++.+.                     +.+.++++|++...+..-..+
T Consensus       325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~  403 (654)
T PRK12769        325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD  403 (654)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence            357899999999999999999999999 8888887543                     355667788654443221000


Q ss_pred             ccHHHHHHhhcCCCccEEEEcCCCH
Q 018022          259 KSVSQIIIDMTDGGADYCFECVGLA  283 (362)
Q Consensus       259 ~~~~~~i~~~~~~g~d~vid~~g~~  283 (362)
                      -.+ +.+.    ..||.||.++|..
T Consensus       404 i~~-~~~~----~~~DavilAtGa~  423 (654)
T PRK12769        404 ISL-ESLL----EDYDAVFVGVGTY  423 (654)
T ss_pred             CCH-HHHH----hcCCEEEEeCCCC
Confidence            111 1111    2699999999863

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=95.44  E-value=0.079  Score=48.05  Aligned_cols=80  Identities=20%  Similarity=0.256  Sum_probs=50.2

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-h----cCC--cEEEcCCCCCCccHHHHHHhhcC--C
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-R----FGV--TEFVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~----~g~--~~vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      +.++||+|+ |.+|.+.+..+...|+ +|+.++++..+.+.+. +    .+.  .+.+..+-.+++++.+.+.+...  +
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   80 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG   80 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            468999998 9999999999888999 8999998876554332 1    221  12222222112233333333321  3


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus        81 ~id~vv~~ag~   91 (259)
T PRK12384         81 RVDLLVYNAGI   91 (259)
T ss_pred             CCCEEEECCCc
Confidence            78999999874

>PRK08862 short chain dehydrogenase; Provisional

Probab=95.43  E-value=0.099  Score=46.80  Aligned_cols=80  Identities=13%  Similarity=0.079  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EEcCCCCCCccHHHHHHhh---cCC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FVNSKNCGDKSVSQIIIDM---TDG  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv~~~~~~~~~~~~~i~~~---~~~  271 (362)
                      .+.+++|+|+ +++|++.+..+...|+ +|+.++++.++++.+.    +.+... .+.-+..+.+++.+.+.+.   .++
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR   82 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4678999998 8899999988888999 8999999888765432    334322 2211110123333333332   222


Q ss_pred             CccEEEEcCC
Q 018022          272 GADYCFECVG  281 (362)
Q Consensus       272 g~d~vid~~g  281 (362)
                      .+|++|.+.|
T Consensus        83 ~iD~li~nag   92 (227)
T PRK08862         83 APDVLVNNWT   92 (227)
T ss_pred             CCCEEEECCc
Confidence            6999999986

>PRK06198 short chain dehydrogenase; Provisional

Probab=95.43  E-value=0.08  Score=47.98  Aligned_cols=80  Identities=19%  Similarity=0.243  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHH----HHhcCCcE---EEcCCCCCCccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI----GKRFGVTE---FVNSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~----~~~~g~~~---vv~~~~~~~~~~~~~i~~~~~--  270 (362)
                      .+.+++|+|+ |.+|...++.+...|++.|++++++.++.+.    +++.+...   .+|-.+  ...+.+.+.....  
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   82 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD--VEDCRRVVAAADEAF   82 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            4678999998 9999999999999999449999988765542    22334322   123322  1223333332211  


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +++|++|.+.|.
T Consensus        83 g~id~li~~ag~   94 (260)
T PRK06198         83 GRLDALVNAAGL   94 (260)
T ss_pred             CCCCEEEECCCc
Confidence            369999999985

>PRK08703 short chain dehydrogenase; Provisional

Probab=95.41  E-value=0.064  Score=48.07  Aligned_cols=81  Identities=23%  Similarity=0.285  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCC-c---EEEcCCCCCCcc---HHHHHHhh
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV-T---EFVNSKNCGDKS---VSQIIIDM  268 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~-~---~vv~~~~~~~~~---~~~~i~~~  268 (362)
                      ++.+++|+|+ |.+|...++.+...|+ +|++++++.++.+.+.+    .+. .   .-.|..+....+   +.+.+.+.
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            4578999998 9999999999988999 89999999877654422    221 1   112221100112   23334443


Q ss_pred             cCCCccEEEEcCCC
Q 018022          269 TDGGADYCFECVGL  282 (362)
Q Consensus       269 ~~~g~d~vid~~g~  282 (362)
                      ..+.+|++|.+.|.
T Consensus        84 ~~~~id~vi~~ag~   97 (239)
T PRK08703         84 TQGKLDGIVHCAGY   97 (239)
T ss_pred             hCCCCCEEEEeccc
Confidence            32468999999984

>PRK06172 short chain dehydrogenase; Provisional

Probab=95.41  E-value=0.09  Score=47.47  Aligned_cols=81  Identities=25%  Similarity=0.297  Sum_probs=51.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHhhc--CCC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMT--DGG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~-~vv~~~~~~~~~~~~~i~~~~--~~g  272 (362)
                      .+.+++|+|+ |.+|...++.+...|+ +|+.+++++++.+.+    ++.+.. +.+..+-.+..++.+.+.+..  -+.
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   84 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR   84 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            4679999998 9999999988888898 899999987765433    233322 222211101122333332221  136


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        85 id~li~~ag~   94 (253)
T PRK06172         85 LDYAFNNAGI   94 (253)
T ss_pred             CCEEEECCCC
Confidence            8999999874

>PRK00811 spermidine synthase; Provisional

Probab=95.40  E-value=0.12  Score=48.08  Aligned_cols=97  Identities=14%  Similarity=0.157  Sum_probs=65.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc-C-----C--c---EEEcCCCCCCccHHHHHHhh
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-G-----V--T---EFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-g-----~--~---~vv~~~~~~~~~~~~~i~~~  268 (362)
                      +..++||++|+|. |..+..+++..+.++|++++.+++-.+.+++. .     .  +   +++.      .+..+.+.+ 
T Consensus        75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~------~Da~~~l~~-  146 (283)
T PRK00811         75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI------GDGIKFVAE-  146 (283)
T ss_pred             CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE------CchHHHHhh-
Confidence            4567999998866 66677777776777999999999988888763 1     1  1   1222      233334433 


Q ss_pred             cCCCccEEEEcCCC----------HHHHHHHHHHhccCCceEEEEcc
Q 018022          269 TDGGADYCFECVGL----------ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       269 ~~~g~d~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ..+.||+||-....          ...++.+.+.|+++ |.++.-..
T Consensus       147 ~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~~  192 (283)
T PRK00811        147 TENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQSG  192 (283)
T ss_pred             CCCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeCC
Confidence            33479999975422          23457888999998 99887643

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=95.40  E-value=0.098  Score=47.45  Aligned_cols=79  Identities=20%  Similarity=0.384  Sum_probs=52.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EEE--cCCCCCCccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFV--NSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~vv--~~~~~~~~~~~~~i~~~~~--  270 (362)
                      ++.++||+|+ |.+|...++.+...|+ +|++++++.++++.+.+    .+.. ..+  |..+  ...+.+.+.++..  
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d--~~~i~~~~~~~~~~~   87 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD--EADIERLAEETLERF   87 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            4688999998 9999999999888999 89999998877655432    2222 122  3222  2233333333221  


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +++|++|.+.|.
T Consensus        88 ~~id~vi~~ag~   99 (259)
T PRK08213         88 GHVDILVNNAGA   99 (259)
T ss_pred             CCCCEEEECCCC
Confidence            268999999874

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.38  E-value=0.092  Score=47.97  Aligned_cols=81  Identities=21%  Similarity=0.335  Sum_probs=48.9

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcEEEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga---g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+   +++|++.++.+...|+ +|+.+.++++..+.+++    .+....+..+-.+.+++.+.+.+...  +
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD   83 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence            4678999984   5899999999989999 88887665433333332    23222222111112333333333322  3


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus        84 ~iD~lVnnAG~   94 (261)
T PRK08690         84 GLDGLVHSIGF   94 (261)
T ss_pred             CCcEEEECCcc
Confidence            79999999874

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.38  E-value=0.55  Score=36.88  Aligned_cols=93  Identities=19%  Similarity=0.125  Sum_probs=63.0

Q ss_pred             EEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHH
Q 018022          205 VVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS  284 (362)
Q Consensus       205 vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~  284 (362)
                      |+|.|.|.+|...++.++..+. +|++++.++++.+.+++.|.. ++.-+.    .-.+.+++..-..++.++-+++...
T Consensus         1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~----~~~~~l~~a~i~~a~~vv~~~~~d~   74 (116)
T PF02254_consen    1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDA----TDPEVLERAGIEKADAVVILTDDDE   74 (116)
T ss_dssp             EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-T----TSHHHHHHTTGGCESEEEEESSSHH
T ss_pred             eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccc----hhhhHHhhcCccccCEEEEccCCHH
Confidence            5788999999999999999776 999999999999999998855 444332    1133444432227999999998775


Q ss_pred             HHH---HHHHHhccCCceEEEEc
Q 018022          285 LVQ---EAYACCRKGWGKTIVLG  304 (362)
Q Consensus       285 ~~~---~~~~~l~~~~G~iv~~G  304 (362)
                      .-.   ...+.+.+. .+++...
T Consensus        75 ~n~~~~~~~r~~~~~-~~ii~~~   96 (116)
T PF02254_consen   75 ENLLIALLARELNPD-IRIIARV   96 (116)
T ss_dssp             HHHHHHHHHHHHTTT-SEEEEEE
T ss_pred             HHHHHHHHHHHHCCC-CeEEEEE
Confidence            322   333444454 5666553

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK08251 short chain dehydrogenase; Provisional

Probab=95.36  E-value=0.11  Score=46.58  Aligned_cols=77  Identities=18%  Similarity=0.325  Sum_probs=50.6

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c-----CCc-EEE--cCCCCCCccHHHHHHhhcC-
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F-----GVT-EFV--NSKNCGDKSVSQIIIDMTD-  270 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~-----g~~-~vv--~~~~~~~~~~~~~i~~~~~-  270 (362)
                      +.+++|+|+ |.+|...++.+...|. +|++++++.++.+.+.. +     +.. +++  |..+  .+.+.+.+.++.. 
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   78 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND--HDQVFEVFAEFRDE   78 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            467999998 9999998888888898 89999988877655432 1     211 222  3222  2334444443322 


Q ss_pred             -CCccEEEEcCC
Q 018022          271 -GGADYCFECVG  281 (362)
Q Consensus       271 -~g~d~vid~~g  281 (362)
                       +++|++|.+.|
T Consensus        79 ~~~id~vi~~ag   90 (248)
T PRK08251         79 LGGLDRVIVNAG   90 (248)
T ss_pred             cCCCCEEEECCC
Confidence             26999999987

>PRK06483 dihydromonapterin reductase; Provisional

Probab=95.35  E-value=0.13  Score=46.03  Aligned_cols=78  Identities=15%  Similarity=0.112  Sum_probs=51.1

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchH-HHHHHhcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccEE
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADYC  276 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~-~~~~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d~v  276 (362)
                      +.++||+|+ +.+|.+.++.+...|+ +|++++++.++ .+.+++.+... ..|-.+  .+++.+.+.+...  +++|++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~l   78 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST--NAGIMAFIDELKQHTDGLRAI   78 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC--HHHHHHHHHHHHhhCCCccEE
Confidence            457999998 9999999999888999 88889887654 33344455422 122222  2333344444332  269999


Q ss_pred             EEcCCC
Q 018022          277 FECVGL  282 (362)
Q Consensus       277 id~~g~  282 (362)
                      +.+.|.
T Consensus        79 v~~ag~   84 (236)
T PRK06483         79 IHNASD   84 (236)
T ss_pred             EECCcc
Confidence            999874

>PRK12743 oxidoreductase; Provisional

Probab=95.35  E-value=0.35  Score=43.82  Aligned_cols=80  Identities=18%  Similarity=0.051  Sum_probs=47.8

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEc-CCchHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHhhcC--CC
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~-~~~~~~~~~----~~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      +.++||+|+ +.+|..+++.+...|+ +|+.+. ++.++.+.+    +..+.. +++..+-.+.+.+.+.+.++..  +.
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR   80 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            468999998 9999999999999999 776664 444444332    334432 2222211012223333333221  26


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        81 id~li~~ag~   90 (256)
T PRK12743         81 IDVLVNNAGA   90 (256)
T ss_pred             CCEEEECCCC
Confidence            8999998874

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=95.32  E-value=0.17  Score=47.20  Aligned_cols=36  Identities=22%  Similarity=0.345  Sum_probs=32.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      .+.+++|+|+|++|++++..+...|+++|+++.|+.
T Consensus       125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD  160 (289)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            467899999999999998888899997799999986

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=95.32  E-value=0.099  Score=49.32  Aligned_cols=78  Identities=21%  Similarity=0.190  Sum_probs=51.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcC---Cc-EEE--cCCCCCCccHHHHHHhhc--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG---VT-EFV--NSKNCGDKSVSQIIIDMT--D  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g---~~-~vv--~~~~~~~~~~~~~i~~~~--~  270 (362)
                      .+.+++|+|+ |++|...++.+...|+ +|++++++.++.+.+. ++.   .. .++  |-.+  ...+.+.+.++.  .
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~   81 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD--LDSVRRFVDDFRALG   81 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC--HHHHHHHHHHHHHhC
Confidence            4678999998 9999999998888998 8999998887765433 332   11 122  2222  122333333322  2


Q ss_pred             CCccEEEEcCC
Q 018022          271 GGADYCFECVG  281 (362)
Q Consensus       271 ~g~d~vid~~g  281 (362)
                      +.+|++|.+.|
T Consensus        82 ~~iD~li~nAg   92 (322)
T PRK07453         82 KPLDALVCNAA   92 (322)
T ss_pred             CCccEEEECCc
Confidence            26999999987

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.32  E-value=0.19  Score=47.91  Aligned_cols=37  Identities=38%  Similarity=0.496  Sum_probs=33.1

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchH
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK  238 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~  238 (362)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++...
T Consensus       149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~  185 (333)
T PRK13243        149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKP  185 (333)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCCh
Confidence            57899999999999999999999999 99999986543

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.31  E-value=0.37  Score=36.53  Aligned_cols=85  Identities=24%  Similarity=0.258  Sum_probs=54.8

Q ss_pred             EEEEECCChHHHHHHHHHHHcC---CCEEE-EEcCCchHHHHHH-hcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          204 TVVIFGLGSIGLAVAEGARLCG---ATRII-GVDVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g---~~~vi-~~~~~~~~~~~~~-~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      +|.|+|+|.+|.+.+.-....|   . +|+ +.++++++.+.+. +++... ..      .+..+.+.     ..|+||-
T Consensus         1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~-~~------~~~~~~~~-----~advvil   67 (96)
T PF03807_consen    1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQA-TA------DDNEEAAQ-----EADVVIL   67 (96)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEE-ES------EEHHHHHH-----HTSEEEE
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccc-cc------CChHHhhc-----cCCEEEE
Confidence            4778899999999999988888   6 777 5599999887764 566432 21      12344444     2799999


Q ss_pred             cCCCHHHHHHHHHH---hccCCceEEEE
Q 018022          279 CVGLASLVQEAYAC---CRKGWGKTIVL  303 (362)
Q Consensus       279 ~~g~~~~~~~~~~~---l~~~~G~iv~~  303 (362)
                      |+.-.. +...+..   ..++ ..++.+
T Consensus        68 av~p~~-~~~v~~~i~~~~~~-~~vis~   93 (96)
T PF03807_consen   68 AVKPQQ-LPEVLSEIPHLLKG-KLVISI   93 (96)
T ss_dssp             -S-GGG-HHHHHHHHHHHHTT-SEEEEE
T ss_pred             EECHHH-HHHHHHHHhhccCC-CEEEEe
Confidence            999765 4444433   3443 344443

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=95.31  E-value=0.27  Score=41.42  Aligned_cols=87  Identities=25%  Similarity=0.255  Sum_probs=56.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc-hHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~-~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      .+.+|.|+|-|.-|.+.++-+|..|. +|++..+.. ...+.+++.|+..         .++.+.++     ..|+|+-.
T Consensus         3 ~~k~IAViGyGsQG~a~AlNLrDSG~-~V~Vglr~~s~s~~~A~~~Gf~v---------~~~~eAv~-----~aDvV~~L   67 (165)
T PF07991_consen    3 KGKTIAVIGYGSQGHAHALNLRDSGV-NVIVGLREGSASWEKAKADGFEV---------MSVAEAVK-----KADVVMLL   67 (165)
T ss_dssp             CTSEEEEES-SHHHHHHHHHHHHCC--EEEEEE-TTCHHHHHHHHTT-EC---------CEHHHHHH-----C-SEEEE-
T ss_pred             CCCEEEEECCChHHHHHHHHHHhCCC-CEEEEecCCCcCHHHHHHCCCee---------ccHHHHHh-----hCCEEEEe
Confidence            46899999999999999999999999 555544444 4888899988752         34555655     38999999


Q ss_pred             CCCH---HHH-HHHHHHhccCCceEEEEc
Q 018022          280 VGLA---SLV-QEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       280 ~g~~---~~~-~~~~~~l~~~~G~iv~~G  304 (362)
                      ++..   ..+ +++...|+++  ....+.
T Consensus        68 ~PD~~q~~vy~~~I~p~l~~G--~~L~fa   94 (165)
T PF07991_consen   68 LPDEVQPEVYEEEIAPNLKPG--ATLVFA   94 (165)
T ss_dssp             S-HHHHHHHHHHHHHHHS-TT---EEEES
T ss_pred             CChHHHHHHHHHHHHhhCCCC--CEEEeC
Confidence            8865   323 4566788885  544443

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.31  E-value=0.16  Score=47.12  Aligned_cols=94  Identities=20%  Similarity=0.278  Sum_probs=66.2

Q ss_pred             ccccchhhhHHHHHHhcCC-CCCCEEEEECCCh-HHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCC
Q 018022          181 LLSCGVSTGVGAAWRTANV-EVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGD  258 (362)
Q Consensus       181 ~~~~~~~ta~~~l~~~~~~-~~g~~vlI~Gag~-~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~  258 (362)
                      .+||+....+. +.+..++ -.|.+++|+|.|. +|.-++.++...|+ +|+++.+..                      
T Consensus       137 ~~PcTp~ai~~-ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t----------------------  192 (286)
T PRK14175        137 FVPCTPLGIME-ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS----------------------  192 (286)
T ss_pred             CCCCcHHHHHH-HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc----------------------
Confidence            45554444443 3455543 3689999999966 99999999999999 888776431                      


Q ss_pred             ccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022          259 KSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       259 ~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      .++.+.++     .+|+||-++|.+..+..  +.++++ ..++.+|..
T Consensus       193 ~~l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~  232 (286)
T PRK14175        193 KDMASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNT  232 (286)
T ss_pred             hhHHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCC
Confidence            22333333     38999999999876655  457886 788899874

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=95.31  E-value=0.12  Score=46.85  Aligned_cols=80  Identities=26%  Similarity=0.381  Sum_probs=52.3

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCc-EEEcCCCCCCccHHHHHHhhcC--CCccEE
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EFVNSKNCGDKSVSQIIIDMTD--GGADYC  276 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~d~v  276 (362)
                      +.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.+ ++.. ..+..+-.+...+.+.+.+...  +.+|++
T Consensus         6 ~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   84 (257)
T PRK07067          6 GKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL   84 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            568999998 9999999999999999 89999998887665443 3321 1222111012333333333321  268999


Q ss_pred             EEcCCC
Q 018022          277 FECVGL  282 (362)
Q Consensus       277 id~~g~  282 (362)
                      |.+.|.
T Consensus        85 i~~ag~   90 (257)
T PRK07067         85 FNNAAL   90 (257)
T ss_pred             EECCCc
Confidence            998873

>PLN02253 xanthoxin dehydrogenase

Probab=95.30  E-value=0.09  Score=48.34  Aligned_cols=79  Identities=22%  Similarity=0.252  Sum_probs=50.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCC---cEE--EcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV---TEF--VNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~---~~v--v~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+ .+++.   .+.  .|-.+  .+.+.+.+.+...  +
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~g   93 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV--EDDVSRAVDFTVDKFG   93 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence            3678999988 9999999988888999 899998877655433 33321   112  22222  2333333333222  3


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus        94 ~id~li~~Ag~  104 (280)
T PLN02253         94 TLDIMVNNAGL  104 (280)
T ss_pred             CCCEEEECCCc
Confidence            69999998874

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.29  E-value=0.11  Score=47.11  Aligned_cols=79  Identities=24%  Similarity=0.378  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchH--HHHHHhcCCcE-E--EcCCCCCCccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--FEIGKRFGVTE-F--VNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~--~~~~~~~g~~~-v--v~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|+++++++..  .+.+++.+... +  .|-.+  .+++.+.+.+...  ++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~   83 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ--QKDIDSIVSQAVEVMGH   83 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC--HHHHHHHHHHHHHHcCC
Confidence            4688999998 9999999999999999 88888765422  22334444322 2  23222  2334444443321  36


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|+++.+.|.
T Consensus        84 iD~lv~~ag~   93 (251)
T PRK12481         84 IDILINNAGI   93 (251)
T ss_pred             CCEEEECCCc
Confidence            9999999874

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=95.29  E-value=0.22  Score=44.67  Aligned_cols=90  Identities=19%  Similarity=0.223  Sum_probs=54.9

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc-------------------hHHH----HHHhcCCcEEEcCCCCCC
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-------------------EKFE----IGKRFGVTEFVNSKNCGD  258 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~-------------------~~~~----~~~~~g~~~vv~~~~~~~  258 (362)
                      ..+|+|.|+|++|..++..+.+.|+.+++.+|.+.                   .|.+    .+++++.+.-+....   
T Consensus        21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~---   97 (228)
T cd00757          21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN---   97 (228)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec---
Confidence            47899999999999999999999998998885433                   1222    223333321122111   


Q ss_pred             ccH-HHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhcc
Q 018022          259 KSV-SQIIIDMTDGGADYCFECVGLASLVQEAYACCRK  295 (362)
Q Consensus       259 ~~~-~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~  295 (362)
                      ..+ .+.+.++.. ++|+||+|+........+-+.+..
T Consensus        98 ~~i~~~~~~~~~~-~~DvVi~~~d~~~~r~~l~~~~~~  134 (228)
T cd00757          98 ERLDAENAEELIA-GYDLVLDCTDNFATRYLINDACVK  134 (228)
T ss_pred             ceeCHHHHHHHHh-CCCEEEEcCCCHHHHHHHHHHHHH
Confidence            111 122333322 599999999988744444444444

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK08317 hypothetical protein; Provisional

Probab=95.29  E-value=0.22  Score=44.30  Aligned_cols=102  Identities=27%  Similarity=0.387  Sum_probs=69.3

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHhc----CC-cEEEcCCCCCCccHHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRF----GV-TEFVNSKNCGDKSVSQIII  266 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~~----g~-~~vv~~~~~~~~~~~~~i~  266 (362)
                      +.+...+.++++||-+|+|. |..+..++...+ ..++++++.+++.++.+++.    +. ..++..+.   .++     
T Consensus        11 ~~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~---~~~-----   81 (241)
T PRK08317         11 TFELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA---DGL-----   81 (241)
T ss_pred             HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc---ccC-----
Confidence            34667889999999999976 888888888763 23999999999888887664    11 11222111   110     


Q ss_pred             hhcCCCccEEEEcC-----CC-HHHHHHHHHHhccCCceEEEEc
Q 018022          267 DMTDGGADYCFECV-----GL-ASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       267 ~~~~~g~d~vid~~-----g~-~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      .+..+.+|.|+...     .. ...+..+.+.|+++ |.+++..
T Consensus        82 ~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~  124 (241)
T PRK08317         82 PFPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD  124 (241)
T ss_pred             CCCCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence            11223789888632     22 24578999999998 9998765

>PRK06482 short chain dehydrogenase; Provisional

Probab=95.27  E-value=0.11  Score=47.77  Aligned_cols=77  Identities=17%  Similarity=0.188  Sum_probs=51.3

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCc-EEE--cCCCCCCccHHHHHHhhc--CCCccE
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EFV--NSKNCGDKSVSQIIIDMT--DGGADY  275 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~-~vv--~~~~~~~~~~~~~i~~~~--~~g~d~  275 (362)
                      .++||+|+ |.+|...++.+...|. +|+++.++.++++.+++ .+.. .++  |..+  .+.+.+.+.+..  .+++|+
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~   79 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD--SAAVRAVVDRAFAALGRIDV   79 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            47999998 9999999988888899 89999998887766544 2221 122  2222  223333333322  136899


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|.+.|.
T Consensus        80 vi~~ag~   86 (276)
T PRK06482         80 VVSNAGY   86 (276)
T ss_pred             EEECCCC
Confidence            9999874

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.27  E-value=0.14  Score=48.94  Aligned_cols=35  Identities=29%  Similarity=0.321  Sum_probs=31.4

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      ..+|+|+|+|++|..++..+.+.|+.+++.+|.+.
T Consensus        24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            46799999999999999999999998999998763

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.27  E-value=0.11  Score=47.10  Aligned_cols=79  Identities=22%  Similarity=0.185  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC-chHHHHHHhcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI-SEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~-~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d~  275 (362)
                      .+.+++|+|+ |++|.+.++.+...|+ +|+++.+. ++..+.+++.+... ..|-.+  ++.+.+.+.+...  +++|+
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN--RDQVKKSKEVVEKEFGRVDV   82 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            4678999998 9999999999988999 77666543 34444454434322 223222  2333344443322  36999


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|.+.|.
T Consensus        83 li~~ag~   89 (255)
T PRK06463         83 LVNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9999875

>PRK07074 short chain dehydrogenase; Provisional

Probab=95.26  E-value=0.11  Score=46.99  Aligned_cols=78  Identities=21%  Similarity=0.289  Sum_probs=51.0

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCC--cEEE--cCCCCCCccHHHHHHhhcC--CCc
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGV--TEFV--NSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~--~~vv--~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      +.++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+ +..  -+++  |-.+  .+.+.+.+.+...  +++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~   78 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD--AASLAAALANAAAERGPV   78 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence            458999998 9999999988888898 89999998877655432 321  1222  2222  2233333333321  268


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        79 d~vi~~ag~   87 (257)
T PRK07074         79 DVLVANAGA   87 (257)
T ss_pred             CEEEECCCC
Confidence            999999974

>PRK05884 short chain dehydrogenase; Provisional

Probab=95.26  E-value=0.11  Score=46.16  Aligned_cols=74  Identities=19%  Similarity=0.249  Sum_probs=49.9

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCcEE-EcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~~v-v~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      +++|+|+ |.+|.+.++.+...|+ +|+.++++.++++.+ ++.+...+ .|-.+  ++++.+.+.++. +.+|++|.+.
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~-~~id~lv~~a   77 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD--PASLEEARGLFP-HHLDTIVNVP   77 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC--HHHHHHHHHHHh-hcCcEEEECC
Confidence            5899988 9999999999988999 899999988877654 34444322 23222  233333333332 2589999886


Q ss_pred             C
Q 018022          281 G  281 (362)
Q Consensus       281 g  281 (362)
                      |
T Consensus        78 g   78 (223)
T PRK05884         78 A   78 (223)
T ss_pred             C
Confidence            5

>PRK05855 short chain dehydrogenase; Validated

Probab=95.25  E-value=0.27  Score=50.02  Aligned_cols=79  Identities=19%  Similarity=0.221  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEE--cCCCCCCccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv--~~~~~~~~~~~~~i~~~~~--  270 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.++++.++++.+.    ..|.. .++  |-.+  .+.+.+.+.+...  
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~  390 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD--ADAMEAFAEWVRAEH  390 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence            4578999998 9999999998889999 8999999887765543    23432 222  2222  2233333333321  


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +.+|++|.+.|.
T Consensus       391 g~id~lv~~Ag~  402 (582)
T PRK05855        391 GVPDIVVNNAGI  402 (582)
T ss_pred             CCCcEEEECCcc
Confidence            368999999885

>PRK06914 short chain dehydrogenase; Provisional

Probab=95.23  E-value=0.11  Score=47.68  Aligned_cols=77  Identities=16%  Similarity=0.151  Sum_probs=50.7

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCC---cEEE--cCCCCCCccHHHHHHhhcC-
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV---TEFV--NSKNCGDKSVSQIIIDMTD-  270 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~---~~vv--~~~~~~~~~~~~~i~~~~~-  270 (362)
                      +.++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+    .+.   .+++  |..+  .+++.+ +.+... 
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~-~~~~~~~   78 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD--QNSIHN-FQLVLKE   78 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC--HHHHHH-HHHHHHh
Confidence            467999998 9999999998888999 89999888776544422    221   1222  3222  233333 444321 


Q ss_pred             -CCccEEEEcCCC
Q 018022          271 -GGADYCFECVGL  282 (362)
Q Consensus       271 -~g~d~vid~~g~  282 (362)
                       +++|+++.+.|.
T Consensus        79 ~~~id~vv~~ag~   91 (280)
T PRK06914         79 IGRIDLLVNNAGY   91 (280)
T ss_pred             cCCeeEEEECCcc
Confidence             368999999874

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.22  E-value=0.17  Score=44.43  Aligned_cols=94  Identities=16%  Similarity=0.180  Sum_probs=58.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch-------------------H----HHHHHhcCCcEEEcCCCCC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-------------------K----FEIGKRFGVTEFVNSKNCG  257 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~-------------------~----~~~~~~~g~~~vv~~~~~~  257 (362)
                      ...+|+|.|+|++|...+..+.+.|+.++..+|.+.=                   |    .+.+++++.+..++...  
T Consensus        20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~--   97 (197)
T cd01492          20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT--   97 (197)
T ss_pred             HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe--
Confidence            3467999999999999999999999988999875421                   1    12244555543333222  


Q ss_pred             CccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCce
Q 018022          258 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGK  299 (362)
Q Consensus       258 ~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~  299 (362)
                       ..+.+...++. .++|+||+|.........+-+.+... +.
T Consensus        98 -~~~~~~~~~~~-~~~dvVi~~~~~~~~~~~ln~~c~~~-~i  136 (197)
T cd01492          98 -DDISEKPEEFF-SQFDVVVATELSRAELVKINELCRKL-GV  136 (197)
T ss_pred             -cCccccHHHHH-hCCCEEEECCCCHHHHHHHHHHHHHc-CC
Confidence             11111112222 26999999988776444555555554 43

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.20  E-value=0.34  Score=42.76  Aligned_cols=93  Identities=16%  Similarity=0.145  Sum_probs=62.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch-HHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~-~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      .|.+|||+|+|.+|..-++.+...|+ +|++++.+.. .++.+.+.|--..+. .+     +...  .+  .++|.||-+
T Consensus         8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~-~~-----~~~~--dl--~~~~lVi~a   76 (205)
T TIGR01470         8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA-RC-----FDAD--IL--EGAFLVIAA   76 (205)
T ss_pred             CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe-CC-----CCHH--Hh--CCcEEEEEC
Confidence            36799999999999999999999999 8888876543 333344444222222 11     1111  11  269999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEcc
Q 018022          280 VGLASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       280 ~g~~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ++.+..-..+....+.. |..+....
T Consensus        77 t~d~~ln~~i~~~a~~~-~ilvn~~d  101 (205)
T TIGR01470        77 TDDEELNRRVAHAARAR-GVPVNVVD  101 (205)
T ss_pred             CCCHHHHHHHHHHHHHc-CCEEEECC
Confidence            99987445666667775 77776654

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK08226 short chain dehydrogenase; Provisional

Probab=95.17  E-value=0.12  Score=46.88  Aligned_cols=81  Identities=25%  Similarity=0.272  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh---cCCc-EEEcCCCCCCccHHHHHHhhcC--CCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVT-EFVNSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~---~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      .+.+++|+|+ |.+|...+..+...|+ +|+.++++.+..+.+++   .+.. ..+..+-....++.+.+.+...  +.+
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   83 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI   83 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999998 9999999999988999 89999987754443332   2322 1222111011233333333221  268


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        84 d~vi~~ag~   92 (263)
T PRK08226         84 DILVNNAGV   92 (263)
T ss_pred             CEEEECCCc
Confidence            999998884

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.16  E-value=0.14  Score=46.39  Aligned_cols=35  Identities=29%  Similarity=0.421  Sum_probs=30.8

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      ..+|+|.|+|++|..+++.+.+.|..+++.+|.+.
T Consensus        24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            37899999999999999999999998999887543

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK05650 short chain dehydrogenase; Provisional

Probab=95.16  E-value=0.44  Score=43.53  Aligned_cols=78  Identities=22%  Similarity=0.199  Sum_probs=48.8

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADY  275 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d~  275 (362)
                      ++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.    ..+.+. ++..+-.+..++.+.+.++..  +++|+
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6899998 9999999988888899 8999998887655432    223222 222111011223333332221  36999


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|.+.|.
T Consensus        81 lI~~ag~   87 (270)
T PRK05650         81 IVNNAGV   87 (270)
T ss_pred             EEECCCC
Confidence            9999884

>PRK05876 short chain dehydrogenase; Provisional

Probab=95.16  E-value=0.12  Score=47.73  Aligned_cols=81  Identities=25%  Similarity=0.214  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EEcCCCCCCccHHHHHHhhc--CCC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FVNSKNCGDKSVSQIIIDMT--DGG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv~~~~~~~~~~~~~i~~~~--~~g  272 (362)
                      .+.++||+|+ |++|.+.+..+...|+ +|++++++.++++.+.    ..+... .+..+-.+..++.+.+.+..  -+.
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH   83 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999998 9999999999999999 8998988877665432    234322 22211101233333333322  136


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        84 id~li~nAg~   93 (275)
T PRK05876         84 VDVVFSNAGI   93 (275)
T ss_pred             CCEEEECCCc
Confidence            8999999884

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.13  E-value=0.22  Score=48.32  Aligned_cols=35  Identities=23%  Similarity=0.246  Sum_probs=32.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      ...+|+|+|+|++|..++..+...|+.+++.++.+
T Consensus       134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            55689999999999999999999999999999986

>PRK08264 short chain dehydrogenase; Validated

Probab=95.13  E-value=0.11  Score=46.50  Aligned_cols=75  Identities=19%  Similarity=0.205  Sum_probs=50.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc-EEE--cCCCCCCccHHHHHHhhcCCCccEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFV--NSKNCGDKSVSQIIIDMTDGGADYC  276 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~-~vv--~~~~~~~~~~~~~i~~~~~~g~d~v  276 (362)
                      .+.+++|+|+ |.+|...++.+...|+++|++++++.++.+.   .+.. +++  |-.+  ..++.+.+...  +.+|++
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~--~~~~~~~~~~~--~~id~v   77 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD--PASVAAAAEAA--SDVTIL   77 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC--HHHHHHHHHhc--CCCCEE
Confidence            4578999987 9999999999999998789999988776543   2221 222  2222  12232222221  258999


Q ss_pred             EEcCCC
Q 018022          277 FECVGL  282 (362)
Q Consensus       277 id~~g~  282 (362)
                      |.+.|.
T Consensus        78 i~~ag~   83 (238)
T PRK08264         78 VNNAGI   83 (238)
T ss_pred             EECCCc
Confidence            999987

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.11  E-value=0.42  Score=42.09  Aligned_cols=92  Identities=17%  Similarity=0.031  Sum_probs=56.5

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc-hHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~-~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      .+.+|||+|+|.+|...+..+...|+ .|++++... +.+..+.+.+.-. .....     +.+.  .+  .++|+||-+
T Consensus         9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~~~i~-~~~~~-----~~~~--~l--~~adlViaa   77 (202)
T PRK06718          9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEEGKIR-WKQKE-----FEPS--DI--VDAFLVIAA   77 (202)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhCCCEE-EEecC-----CChh--hc--CCceEEEEc
Confidence            46799999999999999988888998 888886543 2222222222111 11111     1110  01  168999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEcc
Q 018022          280 VGLASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       280 ~g~~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ++.+. ++..+...+.. +.++....
T Consensus        78 T~d~e-lN~~i~~~a~~-~~lvn~~d  101 (202)
T PRK06718         78 TNDPR-VNEQVKEDLPE-NALFNVIT  101 (202)
T ss_pred             CCCHH-HHHHHHHHHHh-CCcEEECC
Confidence            99988 55544444454 66766654

>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]

Probab=95.11  E-value=0.46  Score=44.99  Aligned_cols=133  Identities=20%  Similarity=0.176  Sum_probs=86.1

Q ss_pred             EEEEECCChHH-HHHHHHHHHcC--CCEEEEEcCCchHHHH-HHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          204 TVVIFGLGSIG-LAVAEGARLCG--ATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       204 ~vlI~Gag~~G-~~a~~la~~~g--~~~vi~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      +|.|+|+|.++ ...+..++..+  +..+.+.+++.++.+. ++++|..+++       .++.+.+.+   ..+|+|+.+
T Consensus         5 rvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~~~~-------~~~~~ll~~---~~iD~V~Ia   74 (342)
T COG0673           5 RVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEFGIAKAY-------TDLEELLAD---PDIDAVYIA   74 (342)
T ss_pred             EEEEEcccHHHHHHhHHHHHhCCCceEEEEEecCCHHHHHHHHHHcCCCccc-------CCHHHHhcC---CCCCEEEEc
Confidence            68899997555 55666666654  4466666888888654 5668876332       233333322   259999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH------HHHhc-CcEEEEeeccCCCccccHHHHHHHHHcCCc
Q 018022          280 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF------EVLHS-GKILMGSLFGGLKAKSDIPILLKRYMDKWS  352 (362)
Q Consensus       280 ~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~------~~~~~-~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l  352 (362)
                      +......+.+..+|..  |+-|++-.     ++..++.      .+-.+ ++.+.=.++..+  ...++.+-+++++|+|
T Consensus        75 tp~~~H~e~~~~AL~a--GkhVl~EK-----Pla~t~~ea~~l~~~a~~~~~~l~v~~~~Rf--~p~~~~~k~li~~g~l  145 (342)
T COG0673          75 TPNALHAELALAALEA--GKHVLCEK-----PLALTLEEAEELVELARKAGVKLMVGFNRRF--DPAVQALKELIDSGAL  145 (342)
T ss_pred             CCChhhHHHHHHHHhc--CCEEEEcC-----CCCCCHHHHHHHHHHHHHcCCceeeehhhhc--CHHHHHHHHHHhcCCc
Confidence            9999889999999999  58888854     3344333      23333 444443333332  3678888999999876


Q ss_pred             ccc
Q 018022          353 YVP  355 (362)
Q Consensus       353 ~~~  355 (362)
                      -..
T Consensus       146 G~v  148 (342)
T COG0673         146 GEV  148 (342)
T ss_pred             Cce
Confidence            543

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.11  E-value=0.19  Score=45.65  Aligned_cols=35  Identities=26%  Similarity=0.382  Sum_probs=30.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      ...+|+|+|+|++|..++..+.+.|+.+++.+|.+
T Consensus        31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            34789999999999999999999999899888654

>PRK06720 hypothetical protein; Provisional

Probab=95.09  E-value=0.18  Score=43.13  Aligned_cols=81  Identities=22%  Similarity=0.183  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHhhc--CCC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMT--DGG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~-~vv~~~~~~~~~~~~~i~~~~--~~g  272 (362)
                      .+.+++|+|+ +++|...+..+...|+ +|++++++.+..+.+    .+.+.. ..+..+-...+++.+.+.+..  -+.
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~   93 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR   93 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4778999998 8899999988888998 899999877655332    223432 222222101123333332221  136


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|+++.+.|.
T Consensus        94 iDilVnnAG~  103 (169)
T PRK06720         94 IDMLFQNAGL  103 (169)
T ss_pred             CCEEEECCCc
Confidence            8999998874

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.09  E-value=0.16  Score=48.01  Aligned_cols=36  Identities=22%  Similarity=0.228  Sum_probs=32.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE  237 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~  237 (362)
                      .|.+|.|+|.|.+|...++.++..|. +|++.++..+
T Consensus       135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~  170 (312)
T PRK15469        135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRK  170 (312)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCC
Confidence            57899999999999999999999999 9999987554

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=95.09  E-value=0.16  Score=47.04  Aligned_cols=88  Identities=17%  Similarity=0.233  Sum_probs=57.9

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCH
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  283 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~  283 (362)
                      +|.|+|.|.+|...+..++..|. .|++.++++++.+.+.+.|.....   .   .+. +.+     ...|+||.|+...
T Consensus         2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~---~---~~~-~~~-----~~aDlVilavp~~   68 (279)
T PRK07417          2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA---S---TDL-SLL-----KDCDLVILALPIG   68 (279)
T ss_pred             eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc---c---CCH-hHh-----cCCCEEEEcCCHH
Confidence            58899999999998888888898 999999999998888877642111   1   111 111     1478999888865


Q ss_pred             HH---HHHHHHHhccCCceEEEEcc
Q 018022          284 SL---VQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       284 ~~---~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ..   ++.+...++++ ..+..+|.
T Consensus        69 ~~~~~~~~l~~~l~~~-~ii~d~~S   92 (279)
T PRK07417         69 LLLPPSEQLIPALPPE-AIVTDVGS   92 (279)
T ss_pred             HHHHHHHHHHHhCCCC-cEEEeCcc
Confidence            42   22333444443 34444443

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=95.08  E-value=0.28  Score=43.93  Aligned_cols=78  Identities=17%  Similarity=0.181  Sum_probs=47.1

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEE-cCCchH-HHHH---HhcCCcEE---EcCCCCCCccHHHHHHhhcC--
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEK-FEIG---KRFGVTEF---VNSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~-~~~~~~-~~~~---~~~g~~~v---v~~~~~~~~~~~~~i~~~~~--  270 (362)
                      +.++||+|+ |.+|...++.+...|+ ++++. .++..+ .+.+   ++.+...+   .|-.+  .+++.+.+.+...  
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   79 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD--WDSTKAAFDKVKAEV   79 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence            578899998 9999999999999999 66664 333332 2222   33344322   22222  1233333333221  


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +++|++|.+.|.
T Consensus        80 ~~id~li~~ag~   91 (246)
T PRK12938         80 GEIDVLVNNAGI   91 (246)
T ss_pred             CCCCEEEECCCC
Confidence            379999999985

>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B

Probab=95.07  E-value=0.022  Score=31.34  Aligned_cols=22  Identities=18%  Similarity=0.271  Sum_probs=16.1

Q ss_pred             eeEEEeccCCCceEEEEeecCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPP   39 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~   39 (362)
                      |||+++.++++ .+++++|.|.+
T Consensus         1 MkAv~y~G~~~-v~ve~VpdP~I   22 (23)
T PF13823_consen    1 MKAVVYHGPKD-VRVEEVPDPKI   22 (23)
T ss_dssp             -EEEEEEETTE-EEEEEE----S
T ss_pred             CcceEEeCCCc-eEEEECCCccc
Confidence            89999999999 99999998875

>PRK06114 short chain dehydrogenase; Provisional

Probab=95.06  E-value=0.16  Score=46.03  Aligned_cols=81  Identities=15%  Similarity=0.232  Sum_probs=50.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCch-HHH-H---HHhcCCc-EEEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-KFE-I---GKRFGVT-EFVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~-~~~-~---~~~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++.+ .++ .   +++.+.. ..+..+-.+++++.+.+.+...  +
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   85 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG   85 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4678999988 9999999999999999 8888887653 222 2   2233422 1222111112333333333321  3


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      .+|++|.+.|.
T Consensus        86 ~id~li~~ag~   96 (254)
T PRK06114         86 ALTLAVNAAGI   96 (254)
T ss_pred             CCCEEEECCCC
Confidence            68999999984

>PRK12367 short chain dehydrogenase; Provisional

Probab=95.05  E-value=0.18  Score=45.81  Aligned_cols=75  Identities=20%  Similarity=0.293  Sum_probs=47.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc-hHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~-~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      .+.+++|+|+ |++|.+.++.+...|+ +|++++++. ++.+.... +....+..+-   .+ .+.+.+.. +.+|++|.
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~---~~-~~~~~~~~-~~iDilVn   85 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDE-SPNEWIKWEC---GK-EESLDKQL-ASLDVLIL   85 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhcc-CCCeEEEeeC---CC-HHHHHHhc-CCCCEEEE
Confidence            3579999998 9999999999999999 898888776 33222211 1122222221   11 12233333 26999999


Q ss_pred             cCCC
Q 018022          279 CVGL  282 (362)
Q Consensus       279 ~~g~  282 (362)
                      +.|.
T Consensus        86 nAG~   89 (245)
T PRK12367         86 NHGI   89 (245)
T ss_pred             CCcc
Confidence            9985

>PRK07856 short chain dehydrogenase; Provisional

Probab=95.05  E-value=0.11  Score=46.98  Aligned_cols=77  Identities=16%  Similarity=0.178  Sum_probs=49.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE-EEcCCCCCCccHHHHHHhhc--CCCccEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMT--DGGADYC  276 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~i~~~~--~~g~d~v  276 (362)
                      .+.++||+|+ |.+|.+.++.+...|+ +|+.++++.++.  ........ ..|..+  .+++.+.+.+..  .+.+|++
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~~--~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~v   79 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPET--VDGRPAEFHAADVRD--PDQVAALVDAIVERHGRLDVL   79 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhhh--hcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            4789999998 9999999999988999 899999876551  11111111 123222  233333333332  1368999


Q ss_pred             EEcCCC
Q 018022          277 FECVGL  282 (362)
Q Consensus       277 id~~g~  282 (362)
                      |.+.|.
T Consensus        80 i~~ag~   85 (252)
T PRK07856         80 VNNAGG   85 (252)
T ss_pred             EECCCC
Confidence            999874

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.05  E-value=0.16  Score=48.50  Aligned_cols=34  Identities=32%  Similarity=0.362  Sum_probs=31.1

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      ..+|+|+|+|++|..++..+...|..+++.+|.+
T Consensus        24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4789999999999999999999999999999975

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.04  E-value=0.14  Score=45.80  Aligned_cols=81  Identities=21%  Similarity=0.284  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      .+.+++|+|+ |.+|...+..+...|+ +|++++++.++.+.+    +..+.. +++..+-.+...+.+.+.+...  ++
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999998 9999999998888999 999999987765443    222321 1222221112334444443321  26


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        85 id~vi~~ag~   94 (239)
T PRK07666         85 IDILINNAGI   94 (239)
T ss_pred             ccEEEEcCcc
Confidence            8999998874

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=95.00  E-value=0.39  Score=42.75  Aligned_cols=105  Identities=19%  Similarity=0.207  Sum_probs=71.0

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHh----cCCcEEEcCCCCCCccHHHHHHhhc
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~~i~~~~  269 (362)
                      ..+......+||=+|.+ +|..++.+|..+. -.+++.++.++++.+.+++    .|.+..+.-..  ..+..+.+.+..
T Consensus        53 ~L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~--~gdal~~l~~~~  129 (219)
T COG4122          53 LLARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLL--GGDALDVLSRLL  129 (219)
T ss_pred             HHHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEe--cCcHHHHHHhcc
Confidence            44555677778777752 4777778888765 3389999999999988864    57654221111  024556665544


Q ss_pred             CCCccEEEEcCCCH---HHHHHHHHHhccCCceEEEE
Q 018022          270 DGGADYCFECVGLA---SLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       270 ~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~  303 (362)
                      .+.||.||--....   ..++.+++.|+++ |-++.=
T Consensus       130 ~~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~D  165 (219)
T COG4122         130 DGSFDLVFIDADKADYPEYLERALPLLRPG-GLIVAD  165 (219)
T ss_pred             CCCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEe
Confidence            45899998766543   6688999999997 877654

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=94.98  E-value=0.15  Score=46.20  Aligned_cols=79  Identities=18%  Similarity=0.186  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEE--cCCCCCCccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv--~~~~~~~~~~~~~i~~~~~--  270 (362)
                      .+.++||+|+ +.+|...+..+...|+ +++.++++.++.+.+.    +.+.. +++  |-.+  .+++.+.+.+...  
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~   86 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFALSKL   86 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            4789999998 9999999998889999 8888888777654432    23322 222  3222  2333333333322  


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +++|++|.+.|.
T Consensus        87 ~~~d~li~~ag~   98 (255)
T PRK06113         87 GKVDILVNNAGG   98 (255)
T ss_pred             CCCCEEEECCCC
Confidence            368999999874

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=94.96  E-value=0.56  Score=43.92  Aligned_cols=89  Identities=17%  Similarity=0.198  Sum_probs=57.9

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCH
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  283 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~  283 (362)
                      +|.|+|.|.+|...+..+...|. +|++.+++.++.+.+.+.|....        .+..+....+  ...|+||-++...
T Consensus         2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~~~~--------~s~~~~~~~~--~~~dvIi~~vp~~   70 (298)
T TIGR00872         2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRTTGV--------ANLRELSQRL--SAPRVVWVMVPHG   70 (298)
T ss_pred             EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCccc--------CCHHHHHhhc--CCCCEEEEEcCch
Confidence            57889999999988888888898 89999999999988887664321        1111111111  1468888888876


Q ss_pred             HHHHH----HHHHhccCCceEEEEcc
Q 018022          284 SLVQE----AYACCRKGWGKTIVLGV  305 (362)
Q Consensus       284 ~~~~~----~~~~l~~~~G~iv~~G~  305 (362)
                       .+..    +...++++ -.++.++.
T Consensus        71 -~~~~v~~~l~~~l~~g-~ivid~st   94 (298)
T TIGR00872        71 -IVDAVLEELAPTLEKG-DIVIDGGN   94 (298)
T ss_pred             -HHHHHHHHHHhhCCCC-CEEEECCC
Confidence             2333    34444553 34445443

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PLN00203 glutamyl-tRNA reductase

Probab=94.96  E-value=0.14  Score=51.58  Aligned_cols=73  Identities=18%  Similarity=0.270  Sum_probs=52.8

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcC-CcE-EEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG-VTE-FVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g-~~~-vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      +.+|+|+|+|.+|.+++..+...|+.+|+++.++.++.+.+. .++ ... +...+     +..+.+.     .+|+||.
T Consensus       266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~-----dl~~al~-----~aDVVIs  335 (519)
T PLN00203        266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLD-----EMLACAA-----EADVVFT  335 (519)
T ss_pred             CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHh-----hHHHHHh-----cCCEEEE
Confidence            678999999999999999999999878999999988876654 453 221 11111     2222221     5899999


Q ss_pred             cCCCHH
Q 018022          279 CVGLAS  284 (362)
Q Consensus       279 ~~g~~~  284 (362)
                      |++.+.
T Consensus       336 AT~s~~  341 (519)
T PLN00203        336 STSSET  341 (519)
T ss_pred             ccCCCC
Confidence            998663

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=94.96  E-value=0.16  Score=45.31  Aligned_cols=81  Identities=20%  Similarity=0.216  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCc-EEEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EFVNSKNCGDKSVSQIIIDMTD--GGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~d~  275 (362)
                      ++.++||+|+ |.+|...+..+...|+ +|+..+++.++++.+. ..+.. +++..+-.+.+.+.+.+.+...  +++|.
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI   83 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3678999998 9999999998888998 8888888877766543 33321 2222211011233333333221  26999


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|.+.|.
T Consensus        84 vi~~ag~   90 (245)
T PRK12936         84 LVNNAGI   90 (245)
T ss_pred             EEECCCC
Confidence            9999884

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=94.96  E-value=0.15  Score=45.72  Aligned_cols=81  Identities=19%  Similarity=0.220  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      .+.++||+|+ |.+|...+..+...|+ +|++++++.++...+    +..+.. .++..+-.+...+.+.+.+...  +.
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4578999998 9999999988888899 899999886654332    222321 2222211011233333333221  26


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        84 ~d~vi~~ag~   93 (251)
T PRK12826         84 LDILVANAGI   93 (251)
T ss_pred             CCEEEECCCC
Confidence            8999998865

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=94.93  E-value=0.23  Score=45.84  Aligned_cols=92  Identities=15%  Similarity=0.080  Sum_probs=59.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcC---CcEEEcCCCCCCccHHHHHHhhcCCCccE
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG---VTEFVNSKNCGDKSVSQIIIDMTDGGADY  275 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g---~~~vv~~~~~~~~~~~~~i~~~~~~g~d~  275 (362)
                      ..+.+++|+|+|++|.+.+..+...|. +|++++++.++.+.+. .+.   ....+..+        +    .....+|+
T Consensus       115 ~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~--------~----~~~~~~Di  181 (270)
T TIGR00507       115 RPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFSMD--------E----LPLHRVDL  181 (270)
T ss_pred             ccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEechh--------h----hcccCccE
Confidence            457889999999999999988888898 9999999888765443 332   21222111        1    11125899


Q ss_pred             EEEcCCCHHH--HH---HHHHHhccCCceEEEEcc
Q 018022          276 CFECVGLASL--VQ---EAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       276 vid~~g~~~~--~~---~~~~~l~~~~G~iv~~G~  305 (362)
                      ||+|++....  ..   .....++++ ..++.+..
T Consensus       182 vInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y  215 (270)
T TIGR00507       182 IINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVY  215 (270)
T ss_pred             EEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEecc
Confidence            9999986420  11   123456775 66666644

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK12746 short chain dehydrogenase; Provisional

Probab=94.92  E-value=0.42  Score=43.07  Aligned_cols=80  Identities=15%  Similarity=0.179  Sum_probs=47.8

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEE-EcCCchHHHHH-Hhc---CCc-EEEcCCCCCCccHHHHHHhhc-----
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIG-VDVISEKFEIG-KRF---GVT-EFVNSKNCGDKSVSQIIIDMT-----  269 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~-~~~~~~~~~~~-~~~---g~~-~vv~~~~~~~~~~~~~i~~~~-----  269 (362)
                      +.+++|+|+ |.+|...++.+...|. +|++ ..++.++.+.+ .++   +.. +++..+-.+.+.+.+.+.+..     
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   84 (254)
T PRK12746          6 GKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI   84 (254)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence            578999998 9999999998888898 6655 46666554332 222   221 222221101233333333321     


Q ss_pred             --C-CCccEEEEcCCC
Q 018022          270 --D-GGADYCFECVGL  282 (362)
Q Consensus       270 --~-~g~d~vid~~g~  282 (362)
                        + +++|++|.+.|.
T Consensus        85 ~~~~~~id~vi~~ag~  100 (254)
T PRK12746         85 RVGTSEIDILVNNAGI  100 (254)
T ss_pred             ccCCCCccEEEECCCC
Confidence              1 268999998875

>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []

Probab=94.90  E-value=0.14  Score=46.22  Aligned_cols=106  Identities=25%  Similarity=0.456  Sum_probs=64.0

Q ss_pred             HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHh----cCCc--EEEcCCCCCCccHHHHHH
Q 018022          194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIII  266 (362)
Q Consensus       194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~g~~--~vv~~~~~~~~~~~~~i~  266 (362)
                      .+....++|++||=+|+|. |..+..+++..+. .+|+++|-+++=++.+++    .+..  +.+..+.   +++     
T Consensus        40 ~~~~~~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da---~~l-----  110 (233)
T PF01209_consen   40 IKLLGLRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDA---EDL-----  110 (233)
T ss_dssp             HHHHT--S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BT---TB------
T ss_pred             HhccCCCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCH---HHh-----
Confidence            4556788999999998765 7777788887653 299999999998887764    2221  2222222   222     


Q ss_pred             hhcCCCccEEEEcCCCH------HHHHHHHHHhccCCceEEEEccCCCC
Q 018022          267 DMTDGGADYCFECVGLA------SLVQEAYACCRKGWGKTIVLGVDQPG  309 (362)
Q Consensus       267 ~~~~~g~d~vid~~g~~------~~~~~~~~~l~~~~G~iv~~G~~~~~  309 (362)
                      .+.+..||+|..+.|-.      ..++++.+.|+|+ |+++.+-...+.
T Consensus       111 p~~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPG-G~l~ile~~~p~  158 (233)
T PF01209_consen  111 PFPDNSFDAVTCSFGLRNFPDRERALREMYRVLKPG-GRLVILEFSKPR  158 (233)
T ss_dssp             -S-TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEE-EEEEEEEEEB-S
T ss_pred             cCCCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCC-eEEEEeeccCCC
Confidence            11123699999877642      5688999999998 999888765433

Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.

>PLN03075 nicotianamine synthase; Provisional

Probab=94.89  E-value=0.2  Score=46.65  Aligned_cols=99  Identities=13%  Similarity=0.109  Sum_probs=66.1

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHhcC-----CcEEEcCCCCCCccHHHHHHhhcCCCc
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRFG-----VTEFVNSKNCGDKSVSQIIIDMTDGGA  273 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~~g-----~~~vv~~~~~~~~~~~~~i~~~~~~g~  273 (362)
                      .++++|+-+|+|+.++.++.+++.+.. .+++.+|.+++..+.+++.-     ...-+....   .|..+....  .++|
T Consensus       122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~---~Da~~~~~~--l~~F  196 (296)
T PLN03075        122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT---ADVMDVTES--LKEY  196 (296)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE---Cchhhcccc--cCCc
Confidence            377899999999999988888875533 38999999999888887632     222122211   222221101  1379


Q ss_pred             cEEEEcC------CC-HHHHHHHHHHhccCCceEEEEc
Q 018022          274 DYCFECV------GL-ASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       274 d~vid~~------g~-~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      |+||-.+      .. ...++.+.+.|+++ |.+++-.
T Consensus       197 DlVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~  233 (296)
T PLN03075        197 DVVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS  233 (296)
T ss_pred             CEEEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence            9999875      12 25578899999997 7776554

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=94.87  E-value=0.59  Score=36.90  Aligned_cols=89  Identities=19%  Similarity=0.230  Sum_probs=62.4

Q ss_pred             EEEEECCChHHHHHHHHHHHc--CCCEEEEEcCCchHHHH-HHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          204 TVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~--g~~~vi~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      +|.|+|.|.+|......++..  +.+.+-+.+++.++.+. .+++|.. ++       .++.+.+.+.   .+|+|+.++
T Consensus         2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~~-------~~~~~ll~~~---~~D~V~I~t   70 (120)
T PF01408_consen    2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-VY-------TDLEELLADE---DVDAVIIAT   70 (120)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-EE-------SSHHHHHHHT---TESEEEEES
T ss_pred             EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-ch-------hHHHHHHHhh---cCCEEEEec
Confidence            578999999999887666655  45334466777777665 4568877 33       2344444322   699999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEcc
Q 018022          281 GLASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       281 g~~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      +.....+.+..+++.  |.-+++-.
T Consensus        71 p~~~h~~~~~~~l~~--g~~v~~EK   93 (120)
T PF01408_consen   71 PPSSHAEIAKKALEA--GKHVLVEK   93 (120)
T ss_dssp             SGGGHHHHHHHHHHT--TSEEEEES
T ss_pred             CCcchHHHHHHHHHc--CCEEEEEc
Confidence            998878888888888  46666643

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=94.87  E-value=0.17  Score=41.08  Aligned_cols=86  Identities=15%  Similarity=0.183  Sum_probs=53.4

Q ss_pred             EEEECC-ChHHHHHHHHHHHcC--CCEEEEEcCCchHH---HHHHhcCCcEEEcCCCCCCccHHHHHH------------
Q 018022          205 VVIFGL-GSIGLAVAEGARLCG--ATRIIGVDVISEKF---EIGKRFGVTEFVNSKNCGDKSVSQIII------------  266 (362)
Q Consensus       205 vlI~Ga-g~~G~~a~~la~~~g--~~~vi~~~~~~~~~---~~~~~~g~~~vv~~~~~~~~~~~~~i~------------  266 (362)
                      |.|+|+ |.+|..++.+.+...  + +|++...+..-.   +.+++|.+..++-.++    ...+.++            
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~----~~~~~l~~~~~~~~~~~~v   75 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADE----EAYEELKKALPSKGPGIEV   75 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSH----HHHHHHHHHHHHTTSSSEE
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH----HHHHHHHHHhhhcCCCCEE
Confidence            578899 999999999999887  6 777766544432   3456788888776654    2223332            


Q ss_pred             --------hhcCC-CccEEEEcCCCHHHHHHHHHHhcc
Q 018022          267 --------DMTDG-GADYCFECVGLASLVQEAYACCRK  295 (362)
Q Consensus       267 --------~~~~~-g~d~vid~~g~~~~~~~~~~~l~~  295 (362)
                              ++... .+|+++.++-+-..+.-.+..++.
T Consensus        76 ~~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~  113 (129)
T PF02670_consen   76 LSGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKA  113 (129)
T ss_dssp             EESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHT
T ss_pred             EeChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHC
Confidence                    22222 567777666665556666666666

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=94.86  E-value=0.2  Score=45.38  Aligned_cols=81  Identities=19%  Similarity=0.304  Sum_probs=49.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchH--HHHHHhcCCc-EEEcCCCCCCccHHHHHHhhcC--CCcc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--FEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GGAD  274 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~--~~~~~~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~d  274 (362)
                      .+.++||+|+ |.+|.+.++.+...|+ +|+.+++.+..  .+.+++.+.. +.+..+-.+.+++.+.+.+...  +.+|
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D   87 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            3678999998 9999999999999999 88888765422  2333344432 1222221112333333333322  2689


Q ss_pred             EEEEcCCC
Q 018022          275 YCFECVGL  282 (362)
Q Consensus       275 ~vid~~g~  282 (362)
                      ++|.+.|.
T Consensus        88 ~li~~Ag~   95 (253)
T PRK08993         88 ILVNNAGL   95 (253)
T ss_pred             EEEECCCC
Confidence            99999884

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=94.84  E-value=0.16  Score=45.75  Aligned_cols=77  Identities=22%  Similarity=0.387  Sum_probs=50.6

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EEE--cCCCCCCccHHHHHHhhcC--CC
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFV--NSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~vv--~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      .++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+    .+.. .++  |..+  .+++.+.+.++..  ++
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~   78 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK--EDEIADMIAAAAAEFGG   78 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHhcCC
Confidence            57999998 9999999998888999 89999998877655443    2221 122  3222  2333333333321  26


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.+.
T Consensus        79 ~d~vi~~a~~   88 (255)
T TIGR01963        79 LDILVNNAGI   88 (255)
T ss_pred             CCEEEECCCC
Confidence            8999988864

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.83  E-value=0.11  Score=48.05  Aligned_cols=80  Identities=16%  Similarity=0.211  Sum_probs=52.8

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHH----HHHhcCC--cEEEcCCCCCCccHHHHHHhhcCC-
Q 018022          200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE----IGKRFGV--TEFVNSKNCGDKSVSQIIIDMTDG-  271 (362)
Q Consensus       200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~----~~~~~g~--~~vv~~~~~~~~~~~~~i~~~~~~-  271 (362)
                      -.|+.|||+|+ +++|++.++=...+|+ +++..|.+.+-.+    ..++.|-  .++.|-.+  .+++.+..++...+ 
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~--~eei~~~a~~Vk~e~  112 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD--REEIYRLAKKVKKEV  112 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC--HHHHHHHHHHHHHhc
Confidence            47899999988 8899887776667788 8888888876433    3344442  23444332  24444444443333 


Q ss_pred             -CccEEEEcCCC
Q 018022          272 -GADYCFECVGL  282 (362)
Q Consensus       272 -g~d~vid~~g~  282 (362)
                       .+|++++.+|.
T Consensus       113 G~V~ILVNNAGI  124 (300)
T KOG1201|consen  113 GDVDILVNNAGI  124 (300)
T ss_pred             CCceEEEecccc
Confidence             78999999885

>PRK08328 hypothetical protein; Provisional

Probab=94.81  E-value=0.16  Score=45.74  Aligned_cols=35  Identities=29%  Similarity=0.396  Sum_probs=30.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      .+.+|+|+|+|++|..++..+.+.|+.+++.+|.+
T Consensus        26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            34689999999999999999999999999998744

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=94.81  E-value=0.25  Score=46.02  Aligned_cols=71  Identities=21%  Similarity=0.190  Sum_probs=51.7

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCH
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  283 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~  283 (362)
                      +|.|+|.|.+|...+..+...|. +|++.+++.++.+.+.+.|....        .+..+.+.     ..|+||.|+...
T Consensus         1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~~~~~-----~aDivi~~vp~~   66 (291)
T TIGR01505         1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA--------ETARQVTE-----QADVIFTMVPDS   66 (291)
T ss_pred             CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc--------CCHHHHHh-----cCCEEEEecCCH
Confidence            37788999999988888888898 99999999999988887765321        12222222     478888888876


Q ss_pred             HHHHH
Q 018022          284 SLVQE  288 (362)
Q Consensus       284 ~~~~~  288 (362)
                      ..+..
T Consensus        67 ~~~~~   71 (291)
T TIGR01505        67 PQVEE   71 (291)
T ss_pred             HHHHH
Confidence            43443

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=94.81  E-value=0.37  Score=40.59  Aligned_cols=89  Identities=20%  Similarity=0.171  Sum_probs=56.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .|.+|+|+|+|.+|..-++.+...|+ .|++++  ++..+.+.+++.-.. ..+.     +.+.  ++  .++|+||-++
T Consensus        12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~-~~~~-----~~~~--dl--~~a~lViaaT   78 (157)
T PRK06719         12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITW-KQKT-----FSND--DI--KDAHLIYAAT   78 (157)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEE-Eecc-----cChh--cC--CCceEEEECC
Confidence            56889999999999998888888999 777774  333334444442221 1111     1110  01  1689999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEc
Q 018022          281 GLASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       281 g~~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      +.+. ++..+...+.. +.++...
T Consensus        79 ~d~e-~N~~i~~~a~~-~~~vn~~  100 (157)
T PRK06719         79 NQHA-VNMMVKQAAHD-FQWVNVV  100 (157)
T ss_pred             CCHH-HHHHHHHHHHH-CCcEEEC
Confidence            9988 66655555554 3444443

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=94.80  E-value=0.18  Score=45.74  Aligned_cols=80  Identities=19%  Similarity=0.241  Sum_probs=49.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      .+.++||+|+ |.+|.+.++.+...|+ +|++++++ ++.+.+    .+.+.. .++..+-...+.+.+.+.+...  +.
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   91 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK   91 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999998 9999999999999999 88888876 333222    233322 2222211012233333333321  36


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        92 id~li~~ag~  101 (258)
T PRK06935         92 IDILVNNAGT  101 (258)
T ss_pred             CCEEEECCCC
Confidence            8999998874

>PRK07577 short chain dehydrogenase; Provisional

Probab=94.76  E-value=0.12  Score=45.87  Aligned_cols=73  Identities=19%  Similarity=0.227  Sum_probs=49.1

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc-EEEcCCCCCCccHHHHHHhhcCC-CccEEEE
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTDG-GADYCFE  278 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid  278 (362)
                      +.+++|+|+ |.+|...++.+...|+ +|++++++.++.     .... ...|..+  .+.+.+.+.++... ++|++|.
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~d~vi~   74 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAIDD-----FPGELFACDLAD--IEQTAATLAQINEIHPVDAIVN   74 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCcccc-----cCceEEEeeCCC--HHHHHHHHHHHHHhCCCcEEEE
Confidence            568999998 9999999999999998 899998876541     1111 1223222  23344444444333 6899999


Q ss_pred             cCCC
Q 018022          279 CVGL  282 (362)
Q Consensus       279 ~~g~  282 (362)
                      +.|.
T Consensus        75 ~ag~   78 (234)
T PRK07577         75 NVGI   78 (234)
T ss_pred             CCCC
Confidence            8884

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=94.76  E-value=0.22  Score=44.20  Aligned_cols=35  Identities=26%  Similarity=0.253  Sum_probs=31.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      ...+|+|+|+|++|...++.+.+.|+.+++.+|.+
T Consensus        27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            34679999999999999999999999889999876

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=94.73  E-value=0.34  Score=45.20  Aligned_cols=72  Identities=17%  Similarity=0.165  Sum_probs=52.1

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCH
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  283 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~  283 (362)
                      +|.|+|.|.+|...+..+...|. +|++.+++.++.+.+.+.|....        .++.+.+.     ..|+||.|+...
T Consensus         4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~~--------~~~~e~~~-----~~d~vi~~vp~~   69 (296)
T PRK11559          4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAETA--------STAKAVAE-----QCDVIITMLPNS   69 (296)
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec--------CCHHHHHh-----cCCEEEEeCCCH
Confidence            68899999999988888888898 89999999998888877765311        12222222     478999998866


Q ss_pred             HHHHHH
Q 018022          284 SLVQEA  289 (362)
Q Consensus       284 ~~~~~~  289 (362)
                      ..+...
T Consensus        70 ~~~~~v   75 (296)
T PRK11559         70 PHVKEV   75 (296)
T ss_pred             HHHHHH
Confidence            544433

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.73  E-value=0.43  Score=43.36  Aligned_cols=101  Identities=22%  Similarity=0.310  Sum_probs=61.9

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHcCCCEEEEEcCCc--hHHHHH-HhcCCc-EEE--cCCCCCCccHHHHHHhhcC-
Q 018022          201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVIS--EKFEIG-KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-  270 (362)
Q Consensus       201 ~g~~vlI~Ga---g~~G~~a~~la~~~g~~~vi~~~~~~--~~~~~~-~~~g~~-~vv--~~~~~~~~~~~~~i~~~~~-  270 (362)
                      .+.+++|+|+   +++|++.++.+...|+ +|+.++++.  +..+.+ ++++.. +.+  |-.+  .+++.+.+.+... 
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~   82 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTN--EEHLASLADRVREH   82 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCC--HHHHHHHHHHHHHH
Confidence            4678999985   6899999998888999 888888653  333333 334321 122  2222  2233333333221 


Q ss_pred             -CCccEEEEcCCCH-----------------------------HHHHHHHHHhccCCceEEEEcc
Q 018022          271 -GGADYCFECVGLA-----------------------------SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       271 -~g~d~vid~~g~~-----------------------------~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                       +.+|++|.+.|..                             ...+.++..|+++ |+|+.++.
T Consensus        83 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~-g~Iv~is~  146 (256)
T PRK07889         83 VDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEG-GSIVGLDF  146 (256)
T ss_pred             cCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccC-ceEEEEee
Confidence             3799999988742                             0123456667776 89988764

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=94.73  E-value=0.26  Score=43.83  Aligned_cols=102  Identities=21%  Similarity=0.271  Sum_probs=62.8

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCcEEEc-------CCCCCCcc-HHHHHHhhc
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFVN-------SKNCGDKS-VSQIIIDMT  269 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~~vv~-------~~~~~~~~-~~~~i~~~~  269 (362)
                      +.++.+||+.|+|. |.-++-+|. +|. .|++++.++.-++.+ ++.+......       +.. ..-+ ....+.++.
T Consensus        32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~  107 (213)
T TIGR03840        32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRA-GNIEIFCGDFFALT  107 (213)
T ss_pred             CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeec-CceEEEEccCCCCC
Confidence            36778999999876 777777774 799 999999999888774 3333321000       000 0000 000011111


Q ss_pred             ---CCCccEEEEcCCC--------HHHHHHHHHHhccCCceEEEEcc
Q 018022          270 ---DGGADYCFECVGL--------ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       270 ---~~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                         .+.||.++|+.--        ...++.+.+.|+++ |++.+++.
T Consensus       108 ~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~  153 (213)
T TIGR03840       108 AADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL  153 (213)
T ss_pred             cccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence               1268999997531        23477899999998 98777755

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=94.72  E-value=0.39  Score=43.29  Aligned_cols=105  Identities=15%  Similarity=0.183  Sum_probs=67.3

Q ss_pred             HHhcCCCCCCEEEEECCChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHh----cCCcEEEcCCCCCCccHHHHHHhh
Q 018022          194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~~i~~~  268 (362)
                      ....+..+..+||=+|.|. |..++.+++.++ ..+++.++.+++..+.+++    .|...-+....   .+..+.+.++
T Consensus        61 ~~l~~~~~~~~vLEiGt~~-G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~---gda~~~L~~l  136 (234)
T PLN02781         61 SMLVKIMNAKNTLEIGVFT-GYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ---SDALSALDQL  136 (234)
T ss_pred             HHHHHHhCCCEEEEecCcc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---ccHHHHHHHH
Confidence            3455667788999888633 555566666553 3399999999988877754    45432222222   3344444444


Q ss_pred             c----CCCccEEEEcCCCH---HHHHHHHHHhccCCceEEEE
Q 018022          269 T----DGGADYCFECVGLA---SLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       269 ~----~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~  303 (362)
                      .    .+.||.||--...+   ..++.+++.++++ |.+++-
T Consensus       137 ~~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~d  177 (234)
T PLN02781        137 LNNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFD  177 (234)
T ss_pred             HhCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEE
Confidence            2    23799998765433   4467889999997 887753

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=94.69  E-value=0.23  Score=40.50  Aligned_cols=97  Identities=22%  Similarity=0.244  Sum_probs=57.7

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch-------------------HHH----HHHhcCC-cEEEcCCCCC
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-------------------KFE----IGKRFGV-TEFVNSKNCG  257 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~-------------------~~~----~~~~~g~-~~vv~~~~~~  257 (362)
                      ..+|+|.|+|++|...+..+.+.|+.+++.+|.+.=                   |.+    .++++.. .++.....  
T Consensus         2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~--   79 (135)
T PF00899_consen    2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE--   79 (135)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES--
T ss_pred             CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec--
Confidence            468999999999999999999999989999875321                   222    2223322 22221111  


Q ss_pred             CccH-HHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEc
Q 018022          258 DKSV-SQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       258 ~~~~-~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                        .+ .+.+.++. .++|+||+|+........+.+.++.. +.-...+
T Consensus        80 --~~~~~~~~~~~-~~~d~vi~~~d~~~~~~~l~~~~~~~-~~p~i~~  123 (135)
T PF00899_consen   80 --KIDEENIEELL-KDYDIVIDCVDSLAARLLLNEICREY-GIPFIDA  123 (135)
T ss_dssp             --HCSHHHHHHHH-HTSSEEEEESSSHHHHHHHHHHHHHT-T-EEEEE
T ss_pred             --ccccccccccc-cCCCEEEEecCCHHHHHHHHHHHHHc-CCCEEEE
Confidence              11 12222322 25899999999877555566666664 5544433

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR00477 tehB tellurite resistance protein TehB

Probab=94.64  E-value=0.18  Score=44.13  Aligned_cols=99  Identities=12%  Similarity=0.165  Sum_probs=59.8

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcEEEcCCCCCCccHHHHHHhh
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~~i~~~  268 (362)
                      +.+.....++.+||-+|+|. |..+..+++ .|. .|+++|.+++-++.+++    .+..  +....   .++.. . .+
T Consensus        22 l~~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~---~d~~~-~-~~   91 (195)
T TIGR00477        22 VREAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRTDA---YDINA-A-AL   91 (195)
T ss_pred             HHHHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--ceeEe---ccchh-c-cc
Confidence            34445555677899998855 666666665 477 99999999877766543    2332  11110   11110 0 11


Q ss_pred             cCCCccEEEEcCC-----C---HHHHHHHHHHhccCCceEEEE
Q 018022          269 TDGGADYCFECVG-----L---ASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       269 ~~~g~d~vid~~g-----~---~~~~~~~~~~l~~~~G~iv~~  303 (362)
                       .+.+|+|+...-     .   ...++.+.+.|+++ |.++++
T Consensus        92 -~~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~  132 (195)
T TIGR00477        92 -NEDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIV  132 (195)
T ss_pred             -cCCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEE
Confidence             236999986422     1   24577888999998 985554

Part of a tellurite-reducing operon tehA and tehB

>PRK11579 putative oxidoreductase; Provisional

Probab=94.62  E-value=1.3  Score=42.30  Aligned_cols=128  Identities=15%  Similarity=0.073  Sum_probs=76.8

Q ss_pred             CEEEEECCChHHH-HHHHHHH-HcCCCEEEE-EcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          203 STVVIFGLGSIGL-AVAEGAR-LCGATRIIG-VDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       203 ~~vlI~Gag~~G~-~a~~la~-~~g~~~vi~-~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      -+|.|+|.|.+|. ..+...+ .-++ .+++ .+++.++..  .+++...+.       .++.+.+.   ...+|+|+.|
T Consensus         5 irvgiiG~G~i~~~~~~~~~~~~~~~-~l~av~d~~~~~~~--~~~~~~~~~-------~~~~ell~---~~~vD~V~I~   71 (346)
T PRK11579          5 IRVGLIGYGYASKTFHAPLIAGTPGL-ELAAVSSSDATKVK--ADWPTVTVV-------SEPQHLFN---DPNIDLIVIP   71 (346)
T ss_pred             ceEEEECCCHHHHHHHHHHHhhCCCC-EEEEEECCCHHHHH--hhCCCCcee-------CCHHHHhc---CCCCCEEEEc
Confidence            3789999999996 4455444 4467 5554 555544432  334322222       23333332   1279999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH------HH-HhcCcEEEEeeccCCCccccHHHHHHHHHcCCc
Q 018022          280 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF------EV-LHSGKILMGSLFGGLKAKSDIPILLKRYMDKWS  352 (362)
Q Consensus       280 ~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~------~~-~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l  352 (362)
                      ++.....+.+..++..  |+-|++-.     ++..+..      .+ -.+++.+.-.+...+  ...++.+-+++++|.|
T Consensus        72 tp~~~H~~~~~~al~a--GkhVl~EK-----Pla~t~~ea~~l~~~a~~~g~~l~v~~~~R~--~p~~~~~k~~i~~g~i  142 (346)
T PRK11579         72 TPNDTHFPLAKAALEA--GKHVVVDK-----PFTVTLSQARELDALAKSAGRVLSVFHNRRW--DSDFLTLKALLAEGVL  142 (346)
T ss_pred             CCcHHHHHHHHHHHHC--CCeEEEeC-----CCCCCHHHHHHHHHHHHHhCCEEEEEeeccC--CHHHHHHHHHHhcCCC
Confidence            9998878899999988  57777743     2333332      12 234555543333222  3568888888888876

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=94.61  E-value=0.39  Score=44.50  Aligned_cols=88  Identities=19%  Similarity=0.195  Sum_probs=66.2

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchH-HHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK-FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  282 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~-~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~  282 (362)
                      +|.++|.|.+|.-.++=+...|+ .+.+.+++.++ .++++..|+...-        +..+.+.     ..|+||-+++.
T Consensus         2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~~a~--------s~~eaa~-----~aDvVitmv~~   67 (286)
T COG2084           2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGATVAA--------SPAEAAA-----EADVVITMLPD   67 (286)
T ss_pred             eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCcccC--------CHHHHHH-----hCCEEEEecCC
Confidence            57888999999999999999999 99999999999 8888888876432        2233333     48999999998


Q ss_pred             HHHHHHHH-------HHhccCCceEEEEccC
Q 018022          283 ASLVQEAY-------ACCRKGWGKTIVLGVD  306 (362)
Q Consensus       283 ~~~~~~~~-------~~l~~~~G~iv~~G~~  306 (362)
                      ...++..+       ..++++ ..++.++..
T Consensus        68 ~~~V~~V~~g~~g~~~~~~~G-~i~IDmSTi   97 (286)
T COG2084          68 DAAVRAVLFGENGLLEGLKPG-AIVIDMSTI   97 (286)
T ss_pred             HHHHHHHHhCccchhhcCCCC-CEEEECCCC
Confidence            86666554       334565 677777654

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=94.61  E-value=0.21  Score=48.69  Aligned_cols=105  Identities=15%  Similarity=0.208  Sum_probs=62.5

Q ss_pred             CCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHH-------HHHhc-CCcEE-EcCCCCCCccHHHHHHh
Q 018022          198 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE-------IGKRF-GVTEF-VNSKNCGDKSVSQIIID  267 (362)
Q Consensus       198 ~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~-------~~~~~-g~~~v-v~~~~~~~~~~~~~i~~  267 (362)
                      +-..+.+|||+|+ |.+|..+++.+...|+ +|++++++..+.+       ..... +...+ .|..+  .+.+.+.+.+
T Consensus        56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d--~~~l~~~~~~  132 (390)
T PLN02657         56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD--ADSLRKVLFS  132 (390)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC--HHHHHHHHHH
Confidence            4456779999998 9999999999988999 8999998775432       11122 22222 23222  1233333332


Q ss_pred             hcCCCccEEEEcCCCH------------HHHHHHHHHhccC-CceEEEEccC
Q 018022          268 MTDGGADYCFECVGLA------------SLVQEAYACCRKG-WGKTIVLGVD  306 (362)
Q Consensus       268 ~~~~g~d~vid~~g~~------------~~~~~~~~~l~~~-~G~iv~~G~~  306 (362)
                      . +.++|+||.|.+..            .....+++.++.. -++++.++..
T Consensus       133 ~-~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~  183 (390)
T PLN02657        133 E-GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI  183 (390)
T ss_pred             h-CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence            2 11699999988742            1122344555443 1368887653

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=94.58  E-value=0.55  Score=43.06  Aligned_cols=102  Identities=19%  Similarity=0.262  Sum_probs=66.8

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHhc-C------Cc--EEEcCCCCCCccHHHH
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRF-G------VT--EFVNSKNCGDKSVSQI  264 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~~-g------~~--~vv~~~~~~~~~~~~~  264 (362)
                      +...++++++||-+|+|. |..+..+++..+. .+|+++|.+++-++.+++- .      .+  .++..+.   .++   
T Consensus        67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~---~~l---  139 (261)
T PLN02233         67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDA---TDL---  139 (261)
T ss_pred             HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccc---ccC---
Confidence            445778899999999865 5566777777653 3999999999988877542 1      11  1222111   111   


Q ss_pred             HHhhcCCCccEEEEcCC-----C-HHHHHHHHHHhccCCceEEEEccC
Q 018022          265 IIDMTDGGADYCFECVG-----L-ASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       265 i~~~~~~g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                        .+.++.||.|+-..+     . ...++++.+.|+++ |+++++-..
T Consensus       140 --p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpG-G~l~i~d~~  184 (261)
T PLN02233        140 --PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPG-SRVSILDFN  184 (261)
T ss_pred             --CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcC-cEEEEEECC
Confidence              111226999986433     1 25578999999998 999887553

>PRK07069 short chain dehydrogenase; Validated

Probab=94.58  E-value=0.42  Score=42.86  Aligned_cols=75  Identities=19%  Similarity=0.310  Sum_probs=47.4

Q ss_pred             EEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC-chHHHHHH-hc----CCcE--EE--cCCCCCCccHHHHHHhhcC--C
Q 018022          205 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVI-SEKFEIGK-RF----GVTE--FV--NSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       205 vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~-~~~~~~~~-~~----g~~~--vv--~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      ++|+|+ |.+|...++.+...|+ +|++++++ .++++.+. ++    +...  .+  |-.+  .+.+.+.+.+...  +
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   78 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGA-KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTD--EAQWQALLAQAADAMG   78 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCC--HHHHHHHHHHHHHHcC
Confidence            789987 9999999999888999 89999887 55554432 22    1111  12  3222  2334343333321  3


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus        79 ~id~vi~~ag~   89 (251)
T PRK07069         79 GLSVLVNNAGV   89 (251)
T ss_pred             CccEEEECCCc
Confidence            68999999874

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=94.57  E-value=0.11  Score=43.02  Aligned_cols=94  Identities=19%  Similarity=0.149  Sum_probs=56.0

Q ss_pred             EEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCC---CCccHHHHHHhhcCCCccEEEEcCC
Q 018022          205 VVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC---GDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       205 vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~---~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      |+|.|+|.+|...+..++..|. .|..+.+.+ +.+.+++-|........+.   ........  ....+.+|++|-|+-
T Consensus         1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK   76 (151)
T PF02558_consen    1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK   76 (151)
T ss_dssp             EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred             CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence            6899999999988888877998 899999877 7777776554321111000   00000000  111127999999987


Q ss_pred             CHH---HHHHHHHHhccCCceEEEE
Q 018022          282 LAS---LVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       282 ~~~---~~~~~~~~l~~~~G~iv~~  303 (362)
                      ...   .++.+...+.++ ..++++
T Consensus        77 a~~~~~~l~~l~~~~~~~-t~iv~~  100 (151)
T PF02558_consen   77 AYQLEQALQSLKPYLDPN-TTIVSL  100 (151)
T ss_dssp             GGGHHHHHHHHCTGEETT-EEEEEE
T ss_pred             ccchHHHHHHHhhccCCC-cEEEEE
Confidence            654   334444455554 566666

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=94.56  E-value=1.2  Score=41.54  Aligned_cols=111  Identities=21%  Similarity=0.221  Sum_probs=71.5

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEc--CCchHHHHHHhcCCcEEEcCCCCC-Ccc-----------
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVD--VISEKFEIGKRFGVTEFVNSKNCG-DKS-----------  260 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~--~~~~~~~~~~~~g~~~vv~~~~~~-~~~-----------  260 (362)
                      ....+++|.+|+=-=+|.+|.+.+.+|+++|++.+++..  -+.+|.++++.+|+.-+..+...+ ...           
T Consensus        55 ~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~~~g~~~~a~~~a~el~~~  134 (300)
T COG0031          55 KRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPGAPGNMKGAIERAKELAAE  134 (300)
T ss_pred             HcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCCCchHHHHHHHHHHHHh
Confidence            444589999443333599999999999999995555543  345788888889887655443210 011           


Q ss_pred             -----------------------HHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEcc
Q 018022          261 -----------------------VSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       261 -----------------------~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                                             ....|.+.+++.+|+++-.+|+..++.-.-+.|+..+..+-.++.
T Consensus       135 ~p~~~~~~~Qf~NpaN~~aH~~tT~~EI~~~~~g~~d~fVagvGTGGTitGvar~Lk~~~p~i~iv~v  202 (300)
T COG0031         135 IPGYAVWLNQFENPANPEAHYETTGPEIWQQTDGKVDAFVAGVGTGGTITGVARYLKERNPNVRIVAV  202 (300)
T ss_pred             CCCceEchhhcCCCccHHHHHhhhHHHHHHHhCCCCCEEEEeCCcchhHHHHHHHHHhhCCCcEEEEE
Confidence                                   112222333345899999988887777777777776444555554

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=94.56  E-value=0.1  Score=47.33  Aligned_cols=105  Identities=17%  Similarity=0.226  Sum_probs=67.4

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHh----cCCcE---EEcCCCCCCccHH-H
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTE---FVNSKNCGDKSVS-Q  263 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~g~~~---vv~~~~~~~~~~~-~  263 (362)
                      +...+++.||++|+=.|.|. |.++..+++..|. .+|+..+.++++.+.+++    .|...   +.+.+      +. +
T Consensus        32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~D------v~~~  104 (247)
T PF08704_consen   32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRD------VCEE  104 (247)
T ss_dssp             HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-------GGCG
T ss_pred             HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecc------eecc
Confidence            45678999999999887654 6666677776653 399999999999888764    45532   22211      11 1


Q ss_pred             HHHhhcCCCccEEEEcCCCH-HHHHHHHHHh-ccCCceEEEEcc
Q 018022          264 IIIDMTDGGADYCFECVGLA-SLVQEAYACC-RKGWGKTIVLGV  305 (362)
Q Consensus       264 ~i~~~~~~g~d~vid~~g~~-~~~~~~~~~l-~~~~G~iv~~G~  305 (362)
                      ...+-....+|.||=-.+.+ ..+..+.+.| +++ |+++.+.-
T Consensus       105 g~~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP  147 (247)
T PF08704_consen  105 GFDEELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSP  147 (247)
T ss_dssp             --STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEES
T ss_pred             cccccccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECC
Confidence            11111112689988877777 4688999999 897 99999954

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PRK07578 short chain dehydrogenase; Provisional

Probab=94.56  E-value=0.71  Score=39.99  Aligned_cols=86  Identities=20%  Similarity=0.239  Sum_probs=53.5

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  282 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~  282 (362)
                      +++|+|+ |++|.+.+..+... . +|++++++..          ....|-.+  .+++.+.+.++  +++|++|.+.|.
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~-~vi~~~r~~~----------~~~~D~~~--~~~~~~~~~~~--~~id~lv~~ag~   65 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-H-EVITAGRSSG----------DVQVDITD--PASIRALFEKV--GKVDAVVSAAGK   65 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-C-cEEEEecCCC----------ceEecCCC--hHHHHHHHHhc--CCCCEEEECCCC
Confidence            5899998 99999888777666 6 8999887653          11223222  12233333322  368888888874


Q ss_pred             H-------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          283 A-------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       283 ~-------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      .                         ...+.+.+.++++ |++++++..
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~iss~  113 (199)
T PRK07578         66 VHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDG-GSFTLTSGI  113 (199)
T ss_pred             CCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CeEEEEccc
Confidence            1                         1233445566676 899988753

>PRK06141 ornithine cyclodeaminase; Validated

Probab=94.53  E-value=0.49  Score=44.71  Aligned_cols=112  Identities=10%  Similarity=-0.003  Sum_probs=68.8

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHH-HcCCCEEEEEcCCchHHHHHH-hc---CCcEEEcCCCCCCccHHHHHHhhcCCCc
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIGK-RF---GVTEFVNSKNCGDKSVSQIIIDMTDGGA  273 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~-~~g~~~vi~~~~~~~~~~~~~-~~---g~~~vv~~~~~~~~~~~~~i~~~~~~g~  273 (362)
                      -....+++|+|+|..|.+.+..+. ..+.++|.+.+++.++.+.+. ++   |.. +...     .+..+.++     ..
T Consensus       122 ~~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~-~~~~-----~~~~~av~-----~a  190 (314)
T PRK06141        122 RKDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFD-AEVV-----TDLEAAVR-----QA  190 (314)
T ss_pred             CCCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCc-eEEe-----CCHHHHHh-----cC
Confidence            356788999999999999876444 467779999999988866543 33   322 1111     12333332     58


Q ss_pred             cEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcE
Q 018022          274 DYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKI  325 (362)
Q Consensus       274 d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~  325 (362)
                      |+|+.+++.+..+- -...++++ -.+..+|.+. ...-+++.. ++.+...
T Consensus       191 DIVi~aT~s~~pvl-~~~~l~~g-~~i~~ig~~~-~~~~El~~~-~~~~a~~  238 (314)
T PRK06141        191 DIISCATLSTEPLV-RGEWLKPG-THLDLVGNFT-PDMRECDDE-AIRRASV  238 (314)
T ss_pred             CEEEEeeCCCCCEe-cHHHcCCC-CEEEeeCCCC-cccccCCHH-HHhcCcE
Confidence            99999988763211 12567885 5556666543 233455543 4444433

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=94.52  E-value=0.47  Score=42.21  Aligned_cols=111  Identities=17%  Similarity=0.223  Sum_probs=66.8

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC----cEEE--cCCCCCCccHHHHHHhhcC--CC
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV----TEFV--NSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~----~~vv--~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      |.+++++|+ |++|++....+...|+ .+.++.-+.|+.+...++.+    ..++  ..+--+-.++.+..++...  +.
T Consensus         5 GKna~vtggagGIGl~~sk~Ll~kgi-k~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~   83 (261)
T KOG4169|consen    5 GKNALVTGGAGGIGLATSKALLEKGI-KVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT   83 (261)
T ss_pred             CceEEEecCCchhhHHHHHHHHHcCc-hheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence            788999976 9999999999999999 77777666776666555432    2222  1211001334444444332  25


Q ss_pred             ccEEEEcCCCH-----------------HHHHHHHHHhc-----cCCceEEEEccCCCCCcccc
Q 018022          273 ADYCFECVGLA-----------------SLVQEAYACCR-----KGWGKTIVLGVDQPGSQLSL  314 (362)
Q Consensus       273 ~d~vid~~g~~-----------------~~~~~~~~~l~-----~~~G~iv~~G~~~~~~~~~~  314 (362)
                      .|++|+-.|.-                 .....+++++.     ++ |.|+.++...+-.+.+.
T Consensus        84 iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~G-GiIvNmsSv~GL~P~p~  146 (261)
T KOG4169|consen   84 IDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKG-GIIVNMSSVAGLDPMPV  146 (261)
T ss_pred             eEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCC-cEEEEeccccccCcccc
Confidence            89999977742                 12333444443     44 88998876544333333

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=94.51  E-value=0.29  Score=45.45  Aligned_cols=80  Identities=23%  Similarity=0.333  Sum_probs=58.5

Q ss_pred             CCCCEEEEECC-ChHHHH-HHHHHHHcCCCEEEEEcCCchHHHHHHh-----cCC---cEEEcCCCCCCccHHHHHHhhc
Q 018022          200 EVGSTVVIFGL-GSIGLA-VAEGARLCGATRIIGVDVISEKFEIGKR-----FGV---TEFVNSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       200 ~~g~~vlI~Ga-g~~G~~-a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~g~---~~vv~~~~~~~~~~~~~i~~~~  269 (362)
                      +.|++.+|+|+ .++|.+ +-++|+ +|. +|+.++|+.+|++..++     .++   ..++|..+  +....+.+++..
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~--~~~~ye~i~~~l  122 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTK--GDEVYEKLLEKL  122 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCC--CchhHHHHHHHh
Confidence            45788999999 889987 555665 999 89999999999877543     343   23567665  122466677766


Q ss_pred             CC-CccEEEEcCCCH
Q 018022          270 DG-GADYCFECVGLA  283 (362)
Q Consensus       270 ~~-g~d~vid~~g~~  283 (362)
                      .+ .+-+.++++|..
T Consensus       123 ~~~~VgILVNNvG~~  137 (312)
T KOG1014|consen  123 AGLDVGILVNNVGMS  137 (312)
T ss_pred             cCCceEEEEeccccc
Confidence            66 888999999863

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=94.51  E-value=0.25  Score=45.06  Aligned_cols=81  Identities=22%  Similarity=0.322  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EEcCCCCCCccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      .+.+++|+|+ +.+|.+.+..+...|+ +|+.++++.++++.+.    +.+... .+..+-.+.+.+.+.+.+...  +.
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV   87 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            5678999998 9999998888888999 8888888887664432    234322 222211012233333333221  26


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        88 id~li~~ag~   97 (265)
T PRK07097         88 IDILVNNAGI   97 (265)
T ss_pred             CCEEEECCCC
Confidence            8999999885

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=94.49  E-value=0.39  Score=44.80  Aligned_cols=37  Identities=24%  Similarity=0.345  Sum_probs=31.6

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE  237 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~  237 (362)
                      .+.+++|+|+|+.+.+++..+...|+++++++.|+.+
T Consensus       123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~  159 (288)
T PRK12749        123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDE  159 (288)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence            5678999999999998777777889989999999853

>PLN00016 RNA-binding protein; Provisional

Probab=94.49  E-value=0.36  Score=46.73  Aligned_cols=95  Identities=16%  Similarity=0.123  Sum_probs=60.5

Q ss_pred             CCEEEEE----CC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHH-----------HHhcCCcEEEcCCCCCCccHHHHH
Q 018022          202 GSTVVIF----GL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI-----------GKRFGVTEFVNSKNCGDKSVSQII  265 (362)
Q Consensus       202 g~~vlI~----Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~-----------~~~~g~~~vv~~~~~~~~~~~~~i  265 (362)
                      ..+|||+    |+ |.+|...+..+...|+ .|++++++......           +...+...+.       .|+.+ +
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-------~D~~d-~  122 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGH-EVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-------GDPAD-V  122 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCC-EEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-------ecHHH-H
Confidence            3679999    98 9999999999888998 99999887654321           1223433322       12222 3


Q ss_pred             HhhcCC-CccEEEEcCCCH-HHHHHHHHHhccCC-ceEEEEcc
Q 018022          266 IDMTDG-GADYCFECVGLA-SLVQEAYACCRKGW-GKTIVLGV  305 (362)
Q Consensus       266 ~~~~~~-g~d~vid~~g~~-~~~~~~~~~l~~~~-G~iv~~G~  305 (362)
                      .+.... ++|+||++.+.. .....+++.++..+ .++++++.
T Consensus       123 ~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS  165 (378)
T PLN00016        123 KSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS  165 (378)
T ss_pred             HhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence            333233 799999998754 22445666666431 26887764

>PRK07775 short chain dehydrogenase; Provisional

Probab=94.48  E-value=0.23  Score=45.62  Aligned_cols=81  Identities=17%  Similarity=0.036  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EEcCCCCCCccHHHHHHhhc--CCC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FVNSKNCGDKSVSQIIIDMT--DGG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv~~~~~~~~~~~~~i~~~~--~~g  272 (362)
                      +..+++|+|+ |.+|.+.++.+...|+ +|+++.++.++.+.+.    ..+... ++..+-.+.+.+.+.+.+..  -++
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            3458999998 9999999998888999 8888888776654332    223322 22222111233333333321  136


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        88 id~vi~~Ag~   97 (274)
T PRK07775         88 IEVLVSGAGD   97 (274)
T ss_pred             CCEEEECCCc
Confidence            8999999875

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=94.47  E-value=0.77  Score=40.91  Aligned_cols=79  Identities=15%  Similarity=0.239  Sum_probs=47.0

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCch--HHHHHHhcC---Cc-EEEcCCCCCCccHHHHHHhhcC--CCc
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRFG---VT-EFVNSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~--~~~~~~~~g---~~-~vv~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      .++||+|+ |.+|..+++.+...|+ +|+.++++.+  ..+......   .. .++..+-...+.+.+.+.+...  +.+
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   81 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGY-RVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV   81 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            47899987 9999999998888898 9999988743  112222222   11 1222221011233333333321  269


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        82 d~vi~~ag~   90 (245)
T PRK12824         82 DILVNNAGI   90 (245)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=94.46  E-value=0.26  Score=50.39  Aligned_cols=94  Identities=11%  Similarity=0.118  Sum_probs=65.4

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  282 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~  282 (362)
                      ++++|.|.|.+|+..++.++..|. +++++|.++++.+.+++.|...+.- +.    .-.+.+++.-=+.+|.++-++++
T Consensus       418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~G-D~----~~~~~L~~a~i~~a~~viv~~~~  491 (558)
T PRK10669        418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLG-NA----ANEEIMQLAHLDCARWLLLTIPN  491 (558)
T ss_pred             CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEc-CC----CCHHHHHhcCccccCEEEEEcCC
Confidence            678999999999999999999999 9999999999999999988665443 22    11333433322278988888776


Q ss_pred             HHHH---HHHHHHhccCCceEEEE
Q 018022          283 ASLV---QEAYACCRKGWGKTIVL  303 (362)
Q Consensus       283 ~~~~---~~~~~~l~~~~G~iv~~  303 (362)
                      +..-   -...+...+. -+++.-
T Consensus       492 ~~~~~~iv~~~~~~~~~-~~iiar  514 (558)
T PRK10669        492 GYEAGEIVASAREKRPD-IEIIAR  514 (558)
T ss_pred             hHHHHHHHHHHHHHCCC-CeEEEE
Confidence            5322   2333444444 555554

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=94.43  E-value=0.52  Score=42.89  Aligned_cols=99  Identities=20%  Similarity=0.192  Sum_probs=67.0

Q ss_pred             HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC-cEEEcCCCCCCccHHHHHHhhcC-C
Q 018022          194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTD-G  271 (362)
Q Consensus       194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~i~~~~~-~  271 (362)
                      .....+.++++||=+|+|. |..+..+++..+..+|++++.++..++.+++.-. ..++..+      ..    ++.. .
T Consensus        24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d------~~----~~~~~~   92 (258)
T PRK01683         24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEAD------IA----SWQPPQ   92 (258)
T ss_pred             HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECc------hh----ccCCCC
Confidence            4556678889999999865 6667777777644499999999998888876421 2233222      11    1112 2


Q ss_pred             CccEEEEcCCC------HHHHHHHHHHhccCCceEEEEc
Q 018022          272 GADYCFECVGL------ASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       272 g~d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      .+|+|+....-      ...+..+.+.|+++ |.+++..
T Consensus        93 ~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~~  130 (258)
T PRK01683         93 ALDLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQM  130 (258)
T ss_pred             CccEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEEC
Confidence            78999865442      24578899999998 9988753

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=94.41  E-value=0.18  Score=45.40  Aligned_cols=84  Identities=19%  Similarity=0.230  Sum_probs=52.8

Q ss_pred             CCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCc--EEE--cCCCCCCccHHHHHHhh
Q 018022          198 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT--EFV--NSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       198 ~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~--~vv--~~~~~~~~~~~~~i~~~  268 (362)
                      +.-++.+++|+|+ |.+|...++.+...|+ +|++++++.++.+.+    ++.+..  .++  +-+.....++.+.+..+
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   86 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI   86 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence            3457889999998 9999999988888899 999999887765433    233322  122  22110112333333333


Q ss_pred             cC--CCccEEEEcCCC
Q 018022          269 TD--GGADYCFECVGL  282 (362)
Q Consensus       269 ~~--~g~d~vid~~g~  282 (362)
                      ..  +.+|++|.+.|.
T Consensus        87 ~~~~~~id~vi~~Ag~  102 (247)
T PRK08945         87 EEQFGRLDGVLHNAGL  102 (247)
T ss_pred             HHHhCCCCEEEECCcc
Confidence            22  268999998864

>PRK07791 short chain dehydrogenase; Provisional

Probab=94.40  E-value=0.32  Score=45.05  Aligned_cols=80  Identities=21%  Similarity=0.238  Sum_probs=49.9

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc---------hHHHH-HH---hcCCcE-EE--cCCCCCCccHH
Q 018022          200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS---------EKFEI-GK---RFGVTE-FV--NSKNCGDKSVS  262 (362)
Q Consensus       200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~---------~~~~~-~~---~~g~~~-vv--~~~~~~~~~~~  262 (362)
                      -.+.++||+|+ +++|.+.++.+...|+ +|++++++.         ++++. ++   +.+... ++  |-.+  .+++.
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~--~~~v~   80 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIAD--WDGAA   80 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCC--HHHHH
Confidence            35789999998 9999999998888999 888887654         33322 22   223322 22  2222  23333


Q ss_pred             HHHHhhcC--CCccEEEEcCCC
Q 018022          263 QIIIDMTD--GGADYCFECVGL  282 (362)
Q Consensus       263 ~~i~~~~~--~g~d~vid~~g~  282 (362)
                      +.+.+...  +.+|++|.+.|.
T Consensus        81 ~~~~~~~~~~g~id~lv~nAG~  102 (286)
T PRK07791         81 NLVDAAVETFGGLDVLVNNAGI  102 (286)
T ss_pred             HHHHHHHHhcCCCCEEEECCCC
Confidence            33333321  379999999885

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=94.39  E-value=0.49  Score=40.61  Aligned_cols=33  Identities=27%  Similarity=0.226  Sum_probs=29.6

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      +|+|+|+|++|...++.+.+.|+.+++.+|.+.
T Consensus         1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            489999999999999999999998899998765

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK01581 speE spermidine synthase; Validated

Probab=94.39  E-value=0.96  Score=43.42  Aligned_cols=98  Identities=14%  Similarity=0.078  Sum_probs=66.7

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC-C----------cE--EEcCCCCCCccHHHHH
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-V----------TE--FVNSKNCGDKSVSQII  265 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g-~----------~~--vv~~~~~~~~~~~~~i  265 (362)
                      .....+|||+|+| .|.++..+++..+.++|++++.+++-.+.++++. .          ..  ++.      .|..+.+
T Consensus       148 h~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi------~Da~~fL  220 (374)
T PRK01581        148 VIDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHV------CDAKEFL  220 (374)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEE------CcHHHHH
Confidence            3455799999975 4667777777666679999999999999988621 0          11  121      2334444


Q ss_pred             HhhcCCCccEEEEcCCCH-----------HHHHHHHHHhccCCceEEEEcc
Q 018022          266 IDMTDGGADYCFECVGLA-----------SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       266 ~~~~~~g~d~vid~~g~~-----------~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      .+ ..+.||+||--...+           ..++.+.+.|+++ |.++.-..
T Consensus       221 ~~-~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~  269 (374)
T PRK01581        221 SS-PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN  269 (374)
T ss_pred             Hh-cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence            43 233799998765432           3567889999998 99887654

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=94.39  E-value=0.18  Score=46.57  Aligned_cols=80  Identities=19%  Similarity=0.243  Sum_probs=54.1

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc------EEEcCCCCCCcc---HHHHH
Q 018022          200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT------EFVNSKNCGDKS---VSQII  265 (362)
Q Consensus       200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~------~vv~~~~~~~~~---~~~~i  265 (362)
                      -.|.++||+|+ .++|.+.+..+...|+ +|+.+++++++.+...+    .+..      .+.|-.+  +++   +.+..
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~l~~~~   82 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSK--EVDVEKLVEFA   82 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCC--HHHHHHHHHHH
Confidence            35788999987 9999999999999999 99999999988765442    2332      1223222  122   22223


Q ss_pred             HhhcCCCccEEEEcCCC
Q 018022          266 IDMTDGGADYCFECVGL  282 (362)
Q Consensus       266 ~~~~~~g~d~vid~~g~  282 (362)
                      .+...|+.|+.++..|.
T Consensus        83 ~~~~~GkidiLvnnag~   99 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGA   99 (270)
T ss_pred             HHHhCCCCCEEEEcCCc
Confidence            33333479999998875

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=94.38  E-value=0.37  Score=43.20  Aligned_cols=75  Identities=19%  Similarity=0.232  Sum_probs=55.5

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh--cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR--FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~--~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      +++|.|+|.+|...++.+...|. .|++++.++++.+...+  .... ++.-+.    .-.+.++++--..+|+++-++|
T Consensus         2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~-~v~gd~----t~~~~L~~agi~~aD~vva~t~   75 (225)
T COG0569           2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTH-VVIGDA----TDEDVLEEAGIDDADAVVAATG   75 (225)
T ss_pred             EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceE-EEEecC----CCHHHHHhcCCCcCCEEEEeeC
Confidence            57899999999999999999999 99999999999877433  5543 333322    1234555542227999999999


Q ss_pred             CHH
Q 018022          282 LAS  284 (362)
Q Consensus       282 ~~~  284 (362)
                      ...
T Consensus        76 ~d~   78 (225)
T COG0569          76 NDE   78 (225)
T ss_pred             CCH
Confidence            864

>PLN02928 oxidoreductase family protein

Probab=94.37  E-value=0.25  Score=47.35  Aligned_cols=35  Identities=31%  Similarity=0.566  Sum_probs=32.1

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      .|.++.|+|.|.+|..+++.++.+|. +|++.+++.
T Consensus       158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~  192 (347)
T PLN02928        158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSW  192 (347)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCC
Confidence            47899999999999999999999999 999998763

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=94.35  E-value=0.14  Score=44.99  Aligned_cols=34  Identities=38%  Similarity=0.473  Sum_probs=30.8

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      ..+|+|.|+|++|...++.+.+.|+.+++.+|.+
T Consensus        21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4679999999999999999999999889999877

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=94.34  E-value=0.65  Score=43.52  Aligned_cols=44  Identities=27%  Similarity=0.338  Sum_probs=37.6

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT  248 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~  248 (362)
                      +|.|+|.|.+|...+.-+...|. +|++.++++++.+.+.+.|+.
T Consensus         2 ~Ig~IGlG~MG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~~   45 (301)
T PRK09599          2 QLGMIGLGRMGGNMARRLLRGGH-EVVGYDRNPEAVEALAEEGAT   45 (301)
T ss_pred             EEEEEcccHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCe
Confidence            57889999999988888888898 899999999998888777653

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=94.34  E-value=0.55  Score=44.24  Aligned_cols=86  Identities=26%  Similarity=0.308  Sum_probs=60.4

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .|.+|.|+|-|.+|.+.++.++..|. +|++..+.....+.++..|+. +.        ++.+.++     ..|+|+-++
T Consensus        15 kgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~-v~--------sl~Eaak-----~ADVV~llL   79 (335)
T PRK13403         15 QGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFE-VM--------SVSEAVR-----TAQVVQMLL   79 (335)
T ss_pred             CcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCE-EC--------CHHHHHh-----cCCEEEEeC
Confidence            57899999999999999999999999 887776655555666666763 21        2333333     489999999


Q ss_pred             CCHH---HH-HHHHHHhccCCceEEEE
Q 018022          281 GLAS---LV-QEAYACCRKGWGKTIVL  303 (362)
Q Consensus       281 g~~~---~~-~~~~~~l~~~~G~iv~~  303 (362)
                      +.+.   .+ ...+..|+++  .++.+
T Consensus        80 Pd~~t~~V~~~eil~~MK~G--aiL~f  104 (335)
T PRK13403         80 PDEQQAHVYKAEVEENLREG--QMLLF  104 (335)
T ss_pred             CChHHHHHHHHHHHhcCCCC--CEEEE
Confidence            8653   22 2466777874  44444

>PLN02476 O-methyltransferase

Probab=94.34  E-value=0.52  Score=43.59  Aligned_cols=105  Identities=16%  Similarity=0.160  Sum_probs=68.6

Q ss_pred             HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHH----hcCCcEEEcCCCCCCccHHHHHHhh
Q 018022          194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~----~~g~~~vv~~~~~~~~~~~~~i~~~  268 (362)
                      ....+.....+||=+|.+ +|..++.+|+.++. .+|+.++.+++..+.++    ++|...-+.-..   .+..+.+.++
T Consensus       111 ~~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~---GdA~e~L~~l  186 (278)
T PLN02476        111 AMLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH---GLAAESLKSM  186 (278)
T ss_pred             HHHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHH
Confidence            345566778899998863 36666667776532 27999999999888775    456643222222   3344455443


Q ss_pred             c----CCCccEEEEcCCCH---HHHHHHHHHhccCCceEEEE
Q 018022          269 T----DGGADYCFECVGLA---SLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       269 ~----~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~  303 (362)
                      .    .+.||.||--....   ..++.+++.++++ |.++.=
T Consensus       187 ~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~D  227 (278)
T PLN02476        187 IQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMD  227 (278)
T ss_pred             HhcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEe
Confidence            2    23799998877654   4467889999997 887754

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=94.32  E-value=0.57  Score=44.00  Aligned_cols=39  Identities=26%  Similarity=0.378  Sum_probs=30.8

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHcCCCEEEEEcCCchHHHH
Q 018022          201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISEKFEI  241 (362)
Q Consensus       201 ~g~~vlI~Ga---g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~  241 (362)
                      .|.++||+|+   .++|.+.++.+...|+ +|+. .++..+++.
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga-~Vv~-~~~~~~l~~   49 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAAGA-EILV-GTWVPALNI   49 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCC-EEEE-EeCcchhhH
Confidence            4789999988   7899999999999999 7777 445444433

>PRK08303 short chain dehydrogenase; Provisional

Probab=94.32  E-value=0.24  Score=46.46  Aligned_cols=34  Identities=18%  Similarity=0.202  Sum_probs=30.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      .+.++||+|+ +++|+++++.+...|+ +|++++++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~   41 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS   41 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence            4679999998 8999999999999999 88888876

>PRK04457 spermidine synthase; Provisional

Probab=94.32  E-value=0.58  Score=42.99  Aligned_cols=95  Identities=13%  Similarity=0.121  Sum_probs=65.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc-CC----c--EEEcCCCCCCccHHHHHHhhcCCC
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GV----T--EFVNSKNCGDKSVSQIIIDMTDGG  272 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-g~----~--~vv~~~~~~~~~~~~~i~~~~~~g  272 (362)
                      .++.+||++|.|. |..+..+++.....++++++.+++-.+.+++. +.    +  +++.      .|..+.+.+. .+.
T Consensus        65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~------~Da~~~l~~~-~~~  136 (262)
T PRK04457         65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE------ADGAEYIAVH-RHS  136 (262)
T ss_pred             CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE------CCHHHHHHhC-CCC
Confidence            4567899999875 77777787776544999999999999998863 32    1  2332      2344444432 237


Q ss_pred             ccEEEEcC-C-C--------HHHHHHHHHHhccCCceEEEE
Q 018022          273 ADYCFECV-G-L--------ASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       273 ~d~vid~~-g-~--------~~~~~~~~~~l~~~~G~iv~~  303 (362)
                      +|+|+--. . .        ...++.+.+.|+++ |.++.-
T Consensus       137 yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvin  176 (262)
T PRK04457        137 TDVILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVVN  176 (262)
T ss_pred             CCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEEE
Confidence            99988421 1 1        36688999999998 998863

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.32  E-value=0.31  Score=46.86  Aligned_cols=36  Identities=19%  Similarity=0.216  Sum_probs=32.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      ...+|+|+|+|++|..++..+.+.|+.+++.+|.+.
T Consensus        27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            347899999999999999999999999999998654

>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]

Probab=94.32  E-value=0.22  Score=47.12  Aligned_cols=102  Identities=19%  Similarity=0.231  Sum_probs=74.5

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      +=+|.+++|.|=|-+|.-.++.++.+|+ +|+++..++-+.-.+.--|+. |..        ..++..     -.|++|-
T Consensus       206 liaGK~vVV~GYG~vGrG~A~~~rg~GA-~ViVtEvDPI~AleA~MdGf~-V~~--------m~~Aa~-----~gDifiT  270 (420)
T COG0499         206 LLAGKNVVVAGYGWVGRGIAMRLRGMGA-RVIVTEVDPIRALEAAMDGFR-VMT--------MEEAAK-----TGDIFVT  270 (420)
T ss_pred             eecCceEEEecccccchHHHHHhhcCCC-eEEEEecCchHHHHHhhcCcE-EEE--------hHHhhh-----cCCEEEE
Confidence            4588999999999999999999999999 999999888776666555654 332        112221     3699999


Q ss_pred             cCCCHHHHH-HHHHHhccCCceEEEEccCCCCCccccCHHHHH
Q 018022          279 CVGLASLVQ-EAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVL  320 (362)
Q Consensus       279 ~~g~~~~~~-~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~  320 (362)
                      ++|+...+. .-+..|+.+ ..+...|.    .+.+++...+-
T Consensus       271 ~TGnkdVi~~eh~~~MkDg-aIl~N~GH----Fd~EI~~~~L~  308 (420)
T COG0499         271 ATGNKDVIRKEHFEKMKDG-AILANAGH----FDVEIDVAGLE  308 (420)
T ss_pred             ccCCcCccCHHHHHhccCC-eEEecccc----cceeccHHHHH
Confidence            999998665 667778886 56666664    45566665543

>PRK07041 short chain dehydrogenase; Provisional

Probab=94.29  E-value=0.75  Score=40.67  Aligned_cols=74  Identities=19%  Similarity=0.243  Sum_probs=46.8

Q ss_pred             EEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c--CC-cEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          206 VIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F--GV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       206 lI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~--g~-~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      ||+|+ |.+|.+.++.+...|+ +|++++++.++.+.+.+ +  +. .+++..+-....++.+.+.+.  +.+|++|.+.
T Consensus         1 lItGas~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~id~li~~a   77 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGA-RVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA--GPFDHVVITA   77 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc--CCCCEEEECC
Confidence            57888 9999999998888999 89999998776654332 2  22 223322210123333333322  3689999998


Q ss_pred             CC
Q 018022          281 GL  282 (362)
Q Consensus       281 g~  282 (362)
                      |.
T Consensus        78 g~   79 (230)
T PRK07041         78 AD   79 (230)
T ss_pred             CC
Confidence            74

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=94.28  E-value=0.49  Score=46.51  Aligned_cols=73  Identities=26%  Similarity=0.361  Sum_probs=52.3

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhh---------cCC-C
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM---------TDG-G  272 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~---------~~~-g  272 (362)
                      .+|.|+|.|.+|+..+..+...|+ .|+++++++++.+.++. |...+.   +   +.+.+.+++.         +.. .
T Consensus         4 ~kI~VIGlG~~G~~~A~~La~~G~-~V~~~D~~~~~v~~l~~-g~~~~~---e---~~l~~~l~~~~~~g~l~~~~~~~~   75 (415)
T PRK11064          4 ETISVIGLGYIGLPTAAAFASRQK-QVIGVDINQHAVDTINR-GEIHIV---E---PDLDMVVKTAVEGGYLRATTTPEP   75 (415)
T ss_pred             cEEEEECcchhhHHHHHHHHhCCC-EEEEEeCCHHHHHHHHC-CCCCcC---C---CCHHHHHHHHhhcCceeeeccccc
Confidence            468999999999999888888898 99999999999887654 322211   2   3344443321         111 5


Q ss_pred             ccEEEEcCCCH
Q 018022          273 ADYCFECVGLA  283 (362)
Q Consensus       273 ~d~vid~~g~~  283 (362)
                      .|++|-|++.+
T Consensus        76 aDvvii~vptp   86 (415)
T PRK11064         76 ADAFLIAVPTP   86 (415)
T ss_pred             CCEEEEEcCCC
Confidence            89999999985

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=94.26  E-value=0.18  Score=44.52  Aligned_cols=97  Identities=19%  Similarity=0.217  Sum_probs=64.1

Q ss_pred             HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcE--EEcCCCCCCccHHHHHHh
Q 018022          194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIIID  267 (362)
Q Consensus       194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~--vv~~~~~~~~~~~~~i~~  267 (362)
                      ....+++++++||-+|+|. |..+..+++.. . ++++++.+++..+.+++    .+...  ++..+.      .+   .
T Consensus        71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~------~~---~  138 (212)
T PRK00312         71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDG------WK---G  138 (212)
T ss_pred             HHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCc------cc---C
Confidence            4567889999999998855 55555566553 3 89999998887766543    34432  222211      11   1


Q ss_pred             hcC-CCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 018022          268 MTD-GGADYCFECVGLASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       268 ~~~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  303 (362)
                      ... +.||.|+...........+.+.|+++ |++++.
T Consensus       139 ~~~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~  174 (212)
T PRK00312        139 WPAYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAP  174 (212)
T ss_pred             CCcCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEE
Confidence            111 37999988766666567888999997 998765

>PLN02256 arogenate dehydrogenase

Probab=94.26  E-value=0.79  Score=43.08  Aligned_cols=97  Identities=12%  Similarity=0.149  Sum_probs=60.8

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCC
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGG  272 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g  272 (362)
                      +.+...-..+.+|.|+|.|.+|...+..++..|. .|+++++++. .+.++++|+.. .       .+..+.+.    ..
T Consensus        27 ~~~~~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~-~-------~~~~e~~~----~~   92 (304)
T PLN02256         27 LQEELEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF-F-------RDPDDFCE----EH   92 (304)
T ss_pred             HhHhhccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee-e-------CCHHHHhh----CC
Confidence            3455555566789999999999998888888887 8999988764 45566677532 1       11222211    14


Q ss_pred             ccEEEEcCCCHHHHHHHHHH-----hccCCceEEEEcc
Q 018022          273 ADYCFECVGLASLVQEAYAC-----CRKGWGKTIVLGV  305 (362)
Q Consensus       273 ~d~vid~~g~~~~~~~~~~~-----l~~~~G~iv~~G~  305 (362)
                      .|+||-|+.... +...+..     ++++ ..++.++.
T Consensus        93 aDvVilavp~~~-~~~vl~~l~~~~l~~~-~iviDv~S  128 (304)
T PLN02256         93 PDVVLLCTSILS-TEAVLRSLPLQRLKRS-TLFVDVLS  128 (304)
T ss_pred             CCEEEEecCHHH-HHHHHHhhhhhccCCC-CEEEecCC
Confidence            688888877553 3333332     3454 55556654

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.25  E-value=0.27  Score=49.18  Aligned_cols=70  Identities=27%  Similarity=0.304  Sum_probs=50.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch-----HHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccE
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-----KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADY  275 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~-----~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~  275 (362)
                      .+.+|+|+|+|.+|+.++.+++.+|+ .|++++..+.     ..+.+++.|+........   .        . ...+|.
T Consensus        15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~---~--------~-~~~~D~   81 (480)
T PRK01438         15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP---T--------L-PEDTDL   81 (480)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc---c--------c-cCCCCE
Confidence            46789999999999999999999999 8988886542     234566778765443322   1        0 115899


Q ss_pred             EEEcCCCH
Q 018022          276 CFECVGLA  283 (362)
Q Consensus       276 vid~~g~~  283 (362)
                      ||.+.|.+
T Consensus        82 Vv~s~Gi~   89 (480)
T PRK01438         82 VVTSPGWR   89 (480)
T ss_pred             EEECCCcC
Confidence            99988875

>PRK07102 short chain dehydrogenase; Provisional

Probab=94.25  E-value=0.38  Score=43.13  Aligned_cols=78  Identities=19%  Similarity=0.155  Sum_probs=49.3

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc--EEEcCCCCCCccHHHHHHhhcCCCccE
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIIIDMTDGGADY  275 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~--~vv~~~~~~~~~~~~~i~~~~~~g~d~  275 (362)
                      .+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+.+    .+..  +++..+-.+.+++.+.+.+.. ..+|+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~~~d~   79 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP-ALPDI   79 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh-hcCCE
Confidence            47899998 9999999999989999 89999998877654322    1111  222222101233333333322 25799


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      ++.+.|.
T Consensus        80 vv~~ag~   86 (243)
T PRK07102         80 VLIAVGT   86 (243)
T ss_pred             EEECCcC
Confidence            9988774

>PRK06523 short chain dehydrogenase; Provisional

Probab=94.25  E-value=0.2  Score=45.37  Aligned_cols=75  Identities=19%  Similarity=0.228  Sum_probs=47.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADYC  276 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d~v  276 (362)
                      ++.++||+|+ |.+|...++.+...|+ +|++++++.++.  . .-.... ..|-.+  .+.+.+.+.++..  +++|++
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~--~-~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~v   81 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD--L-PEGVEFVAADLTT--AEGCAAVARAVLERLGGVDIL   81 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh--c-CCceeEEecCCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            4689999998 9999999999988999 899998875432  1 111111 122222  1222222222221  268999


Q ss_pred             EEcCC
Q 018022          277 FECVG  281 (362)
Q Consensus       277 id~~g  281 (362)
                      |.+.|
T Consensus        82 i~~ag   86 (260)
T PRK06523         82 VHVLG   86 (260)
T ss_pred             EECCc
Confidence            99988

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=94.24  E-value=0.32  Score=50.44  Aligned_cols=94  Identities=15%  Similarity=0.179  Sum_probs=65.5

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      .++|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...+. -+.    .-.+.+++.--..+|.++-+++
T Consensus       400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDa----t~~~~L~~agi~~A~~vvv~~~  473 (621)
T PRK03562        400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GDA----TRMDLLESAGAAKAEVLINAID  473 (621)
T ss_pred             cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-EeC----CCHHHHHhcCCCcCCEEEEEeC
Confidence            3679999999999999999999999 999999999999999998875433 222    1123333322127999999999


Q ss_pred             CHHHHHH---HHHHhccCCceEEE
Q 018022          282 LASLVQE---AYACCRKGWGKTIV  302 (362)
Q Consensus       282 ~~~~~~~---~~~~l~~~~G~iv~  302 (362)
                      ++..-..   ..+.+.++ -+++.
T Consensus       474 d~~~n~~i~~~ar~~~p~-~~iia  496 (621)
T PRK03562        474 DPQTSLQLVELVKEHFPH-LQIIA  496 (621)
T ss_pred             CHHHHHHHHHHHHHhCCC-CeEEE
Confidence            8753323   33334443 45544

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=94.24  E-value=0.22  Score=46.16  Aligned_cols=133  Identities=18%  Similarity=0.184  Sum_probs=89.3

Q ss_pred             hcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCC--------CCccHHHHHHh
Q 018022          196 TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC--------GDKSVSQIIID  267 (362)
Q Consensus       196 ~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~--------~~~~~~~~i~~  267 (362)
                      .++..++.++++.|+|.+|+.++..++..|+ .|...+....+.+..+++|+..+-..+++        -.++|..+-.+
T Consensus       158 Aagtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~  236 (356)
T COG3288         158 AAGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAE  236 (356)
T ss_pred             hcccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHH
Confidence            4455677889999999999999999999999 99999988889888888887532211221        11234433333


Q ss_pred             hcCC---CccEEEEcCCCH------HHHHHHHHHhccCCceEEEEccCCCC-CccccCHHHHHhcCcEEEEee
Q 018022          268 MTDG---GADYCFECVGLA------SLVQEAYACCRKGWGKTIVLGVDQPG-SQLSLSSFEVLHSGKILMGSL  330 (362)
Q Consensus       268 ~~~~---g~d~vid~~g~~------~~~~~~~~~l~~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~i~g~~  330 (362)
                      +..+   ++|+||-+.=.+      .........|+++ +.++.+....++ -....+-.....++.+|.|..
T Consensus       237 ~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~  308 (356)
T COG3288         237 LVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT  308 (356)
T ss_pred             HHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence            3322   799999865332      3345889999998 999988653322 222222223344578888864

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=94.23  E-value=0.3  Score=47.80  Aligned_cols=76  Identities=17%  Similarity=0.271  Sum_probs=49.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCC-cEEEcCCCCCCccHHHHHHhhcCCCccEEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCF  277 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~-~~vv~~~~~~~~~~~~~i~~~~~~g~d~vi  277 (362)
                      .+.+++|+|+ |++|.+.+..+...|+ +|+++++++++++... ..+. ...+..+-   .+ .+.+.+.. +++|++|
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dv---sd-~~~v~~~l-~~IDiLI  250 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQV---GQ-EAALAELL-EKVDILI  250 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeC---CC-HHHHHHHh-CCCCEEE
Confidence            4679999998 9999999998888999 9999988876654322 1111 12222211   11 22333333 2699999


Q ss_pred             EcCCC
Q 018022          278 ECVGL  282 (362)
Q Consensus       278 d~~g~  282 (362)
                      .+.|.
T Consensus       251 nnAGi  255 (406)
T PRK07424        251 INHGI  255 (406)
T ss_pred             ECCCc
Confidence            98774

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.23  E-value=0.21  Score=46.11  Aligned_cols=71  Identities=20%  Similarity=0.068  Sum_probs=51.4

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCcEEEcCCCCCCccHHHHHHhhcCCCccE
Q 018022          197 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADY  275 (362)
Q Consensus       197 ~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~  275 (362)
                      .+...+.+++|+|+|+.+++++..++..|+.+|+++.|+.+|.+.+. .++..            +.+.+   ....+|+
T Consensus       117 ~~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~------------~~~~~---~~~~~dl  181 (272)
T PRK12550        117 YQVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE------------WRPDL---GGIEADI  181 (272)
T ss_pred             cCCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc------------chhhc---ccccCCE
Confidence            34555678999999999999999999999988999999998877654 34311            00011   1125899


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      ||+|+..
T Consensus       182 vINaTp~  188 (272)
T PRK12550        182 LVNVTPI  188 (272)
T ss_pred             EEECCcc
Confidence            9999864

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=94.22  E-value=1.3  Score=38.12  Aligned_cols=39  Identities=23%  Similarity=0.325  Sum_probs=32.2

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK  243 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~  243 (362)
                      +|.|+|+|.+|...+.++...|+ +|+..+.+++.++.++
T Consensus         1 ~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~l~~~~   39 (180)
T PF02737_consen    1 KVAVIGAGTMGRGIAALFARAGY-EVTLYDRSPEALERAR   39 (180)
T ss_dssp             EEEEES-SHHHHHHHHHHHHTTS-EEEEE-SSHHHHHHHH
T ss_pred             CEEEEcCCHHHHHHHHHHHhCCC-cEEEEECChHHHHhhh
Confidence            58899999999999999988899 9999999998776543

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=94.21  E-value=0.49  Score=45.02  Aligned_cols=37  Identities=38%  Similarity=0.390  Sum_probs=33.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchH
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK  238 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~  238 (362)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++.+.
T Consensus       145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~  181 (330)
T PRK12480        145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNK  181 (330)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhH
Confidence            56789999999999999999999999 99999987654

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=94.20  E-value=0.72  Score=43.15  Aligned_cols=90  Identities=20%  Similarity=0.345  Sum_probs=58.4

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCH
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  283 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~  283 (362)
                      +|.++|.|.+|...+.-+...|. +|++.+++.++.+.+.+.|... .       .+..+.+.+..  ..|+||-|+...
T Consensus         2 ~Ig~IGlG~mG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~~~-~-------~s~~~~~~~~~--~advVi~~vp~~   70 (299)
T PRK12490          2 KLGLIGLGKMGGNMAERLREDGH-EVVGYDVNQEAVDVAGKLGITA-R-------HSLEELVSKLE--APRTIWVMVPAG   70 (299)
T ss_pred             EEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCee-c-------CCHHHHHHhCC--CCCEEEEEecCc
Confidence            47888999999988888888898 8899999999988887777432 1       12222222211  257888888876


Q ss_pred             HHHHHHH----HHhccCCceEEEEcc
Q 018022          284 SLVQEAY----ACCRKGWGKTIVLGV  305 (362)
Q Consensus       284 ~~~~~~~----~~l~~~~G~iv~~G~  305 (362)
                      ..++.++    ..++++ ..++.++.
T Consensus        71 ~~~~~v~~~i~~~l~~g-~ivid~st   95 (299)
T PRK12490         71 EVTESVIKDLYPLLSPG-DIVVDGGN   95 (299)
T ss_pred             hHHHHHHHHHhccCCCC-CEEEECCC
Confidence            3344333    334454 45566654

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=94.20  E-value=1  Score=41.01  Aligned_cols=93  Identities=24%  Similarity=0.284  Sum_probs=61.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc---EEEcCCCCCCccHHHHHHhhcCCC
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDMTDGG  272 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~~~i~~~~~~g  272 (362)
                      ..+.+||-+|+|. |..+..+++. |. +|++++.+++.++.+++    .|..   .++..      +. ..+.....+.
T Consensus        43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~------d~-~~l~~~~~~~  112 (255)
T PRK11036         43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC------AA-QDIAQHLETP  112 (255)
T ss_pred             CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEc------CH-HHHhhhcCCC
Confidence            4567888888865 6677777764 77 99999999998887765    2321   22221      11 1222223347


Q ss_pred             ccEEEEcCC-----C-HHHHHHHHHHhccCCceEEEE
Q 018022          273 ADYCFECVG-----L-ASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       273 ~d~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~  303 (362)
                      ||+|+....     . ...+..+.+.|+++ |.++++
T Consensus       113 fD~V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~  148 (255)
T PRK11036        113 VDLILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLM  148 (255)
T ss_pred             CCEEEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEE
Confidence            999986422     2 24578899999998 998765

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.18  E-value=0.29  Score=43.72  Aligned_cols=80  Identities=23%  Similarity=0.321  Sum_probs=48.9

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEE-cCCchHHHHHHh----cCCc-EEEcCCCCCCccHHHHHHhhcC--CC
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~-~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      +.++||+|+ |.+|...+..+...|+ +++++ +++.++.+.+..    .+.. .++..+-.+...+.+.+.+...  ++
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK   83 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            468999998 9999999888888899 78887 887776544322    2221 2222221012233333333222  26


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        84 id~vi~~ag~   93 (247)
T PRK05565         84 IDILVNNAGI   93 (247)
T ss_pred             CCEEEECCCc
Confidence            9999998874

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=94.17  E-value=0.31  Score=45.16  Aligned_cols=90  Identities=24%  Similarity=0.358  Sum_probs=56.0

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCE-EEEEcCCchHHHHHHhcCC-cEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATR-IIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~-vi~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .+|+|.|.|.+|...+..++..|... |+..+++.+..+.+.++|. ++....      .....+     ...|+||-++
T Consensus         4 ~~v~IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv~d~~~~~------~~~~~~-----~~aD~Vivav   72 (279)
T COG0287           4 MKVGIVGLGLMGGSLARALKEAGLVVRIIGRDRSAATLKAALELGVIDELTVA------GLAEAA-----AEADLVIVAV   72 (279)
T ss_pred             cEEEEECCchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCcccccccc------hhhhhc-----ccCCEEEEec
Confidence            57888899999999999999999843 5777777777777777775 221110      001111     1478888887


Q ss_pred             CCHHHHHHHHH----HhccCCceEEEEcc
Q 018022          281 GLASLVQEAYA----CCRKGWGKTIVLGV  305 (362)
Q Consensus       281 g~~~~~~~~~~----~l~~~~G~iv~~G~  305 (362)
                      +... ....++    .++++ ..++.+|.
T Consensus        73 Pi~~-~~~~l~~l~~~l~~g-~iv~Dv~S   99 (279)
T COG0287          73 PIEA-TEEVLKELAPHLKKG-AIVTDVGS   99 (279)
T ss_pred             cHHH-HHHHHHHhcccCCCC-CEEEeccc
Confidence            7664 333333    34444 45556654

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=94.17  E-value=0.36  Score=40.57  Aligned_cols=85  Identities=14%  Similarity=0.041  Sum_probs=54.7

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC------cEEEcCCCCCCccHHHHHHhhcCCCccEEE
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV------TEFVNSKNCGDKSVSQIIIDMTDGGADYCF  277 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~------~~vv~~~~~~~~~~~~~i~~~~~~g~d~vi  277 (362)
                      +|.|+|+|..|.+++..+...|. +|....++++..+.+++-+.      ...+...-.-..++.+.++     +.|+++
T Consensus         1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~-----~ad~Ii   74 (157)
T PF01210_consen    1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALE-----DADIII   74 (157)
T ss_dssp             EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHT-----T-SEEE
T ss_pred             CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhC-----cccEEE
Confidence            58899999999999999999998 99999999888777765322      0101100000123444442     589999


Q ss_pred             EcCCCHHHHHHHHHHhcc
Q 018022          278 ECVGLASLVQEAYACCRK  295 (362)
Q Consensus       278 d~~g~~~~~~~~~~~l~~  295 (362)
                      -++.... .+..++.+++
T Consensus        75 iavPs~~-~~~~~~~l~~   91 (157)
T PF01210_consen   75 IAVPSQA-HREVLEQLAP   91 (157)
T ss_dssp             E-S-GGG-HHHHHHHHTT
T ss_pred             ecccHHH-HHHHHHHHhh
Confidence            9999875 5555555554

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=94.16  E-value=0.35  Score=45.84  Aligned_cols=94  Identities=16%  Similarity=0.072  Sum_probs=63.4

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE------EcCCCCCCccHHHHHHhhcCCCccEE
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF------VNSKNCGDKSVSQIIIDMTDGGADYC  276 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v------v~~~~~~~~~~~~~i~~~~~~g~d~v  276 (362)
                      -+|.|+|+|.+|.+.+..+...|. .|.+.+++.++.+.+.+.+....      +..+-....+..+.+     +..|+|
T Consensus         5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~-----~~aD~V   78 (328)
T PRK14618          5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL-----AGADFA   78 (328)
T ss_pred             CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH-----cCCCEE
Confidence            368999999999999998888898 89999998888777665421100      000000001222222     258999


Q ss_pred             EEcCCCHHHHHHHHHHhccCCceEEEEc
Q 018022          277 FECVGLASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       277 id~~g~~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      |.++.... +..+++.++++ -.++.+.
T Consensus        79 i~~v~~~~-~~~v~~~l~~~-~~vi~~~  104 (328)
T PRK14618         79 VVAVPSKA-LRETLAGLPRA-LGYVSCA  104 (328)
T ss_pred             EEECchHH-HHHHHHhcCcC-CEEEEEe
Confidence            99999886 68888888885 5666554

>PLN02244 tocopherol O-methyltransferase

Probab=94.16  E-value=0.3  Score=46.72  Aligned_cols=95  Identities=21%  Similarity=0.255  Sum_probs=63.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc---EEEcCCCCCCccHHHHHHhhcCCC
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDMTDGG  272 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~~~i~~~~~~g  272 (362)
                      +++++||=+|+|. |..+..+++..|. +|++++.++...+.+++    .+..   .++..+.   .++     .+.++.
T Consensus       117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~---~~~-----~~~~~~  186 (340)
T PLN02244        117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADA---LNQ-----PFEDGQ  186 (340)
T ss_pred             CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCc---ccC-----CCCCCC
Confidence            7889999999865 6667777887788 99999999887766554    2331   1222111   110     112337


Q ss_pred             ccEEEEcCCC------HHHHHHHHHHhccCCceEEEEcc
Q 018022          273 ADYCFECVGL------ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       273 ~d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ||+|+.....      ...+.++.+.|+++ |++++...
T Consensus       187 FD~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~  224 (340)
T PLN02244        187 FDLVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW  224 (340)
T ss_pred             ccEEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            9999864332      24577899999998 99988653

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.15  E-value=0.47  Score=44.31  Aligned_cols=93  Identities=18%  Similarity=0.259  Sum_probs=65.7

Q ss_pred             ccccchhhhHHHHHHhcCC-CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEc-CCchHHHHHHhcCCcEEEcCCCCC
Q 018022          181 LLSCGVSTGVGAAWRTANV-EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISEKFEIGKRFGVTEFVNSKNCG  257 (362)
Q Consensus       181 ~~~~~~~ta~~~l~~~~~~-~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~-~~~~~~~~~~~~g~~~vv~~~~~~  257 (362)
                      .++|+....+. +.+..++ -.|.+|+|+|. +.+|.-.+.++...|+ .|++.. ++.                     
T Consensus       137 ~~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~---------------------  193 (296)
T PRK14188        137 LVPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR---------------------  193 (296)
T ss_pred             CcCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC---------------------
Confidence            45555443443 4454454 47999999995 9999999999999999 888874 321                     


Q ss_pred             CccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022          258 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       258 ~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                        ++.+.++     ..|+|+-++|.+..+...+  ++++ ..++.+|..
T Consensus       194 --~l~e~~~-----~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin  232 (296)
T PRK14188        194 --DLPAVCR-----RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGIN  232 (296)
T ss_pred             --CHHHHHh-----cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCc
Confidence              1222222     3899999999998777655  8887 888899864

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=94.12  E-value=0.67  Score=40.20  Aligned_cols=92  Identities=26%  Similarity=0.441  Sum_probs=54.0

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhc--------C-----
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT--------D-----  270 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~--------~-----  270 (362)
                      +|-|+|.|-+|+-.+..+...|+ +|++++.++++.+.+++ |...+.   +   +.+.+.+++..        .     
T Consensus         2 ~I~ViGlGyvGl~~A~~lA~~G~-~V~g~D~~~~~v~~l~~-g~~p~~---E---~~l~~ll~~~~~~~~l~~t~~~~~a   73 (185)
T PF03721_consen    2 KIAVIGLGYVGLPLAAALAEKGH-QVIGVDIDEEKVEALNN-GELPIY---E---PGLDELLKENVSAGRLRATTDIEEA   73 (185)
T ss_dssp             EEEEE--STTHHHHHHHHHHTTS-EEEEE-S-HHHHHHHHT-TSSSS----C---TTHHHHHHHHHHTTSEEEESEHHHH
T ss_pred             EEEEECCCcchHHHHHHHHhCCC-EEEEEeCChHHHHHHhh-cccccc---c---cchhhhhccccccccchhhhhhhhh
Confidence            57899999999999999999999 99999999999988876 221111   1   23333333221        0     


Q ss_pred             -CCccEEEEcCCCH-------------HHHHHHHHHhccCCceEEEEcc
Q 018022          271 -GGADYCFECVGLA-------------SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       271 -~g~d~vid~~g~~-------------~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                       ...|++|-|++.+             .+++.+...+++  +.++.+-.
T Consensus        74 i~~adv~~I~VpTP~~~~~~~Dls~v~~a~~~i~~~l~~--~~lvV~~S  120 (185)
T PF03721_consen   74 IKDADVVFICVPTPSDEDGSPDLSYVESAIESIAPVLRP--GDLVVIES  120 (185)
T ss_dssp             HHH-SEEEE----EBETTTSBETHHHHHHHHHHHHHHCS--CEEEEESS
T ss_pred             hhccceEEEecCCCccccCCccHHHHHHHHHHHHHHHhh--cceEEEcc
Confidence             0379999999875             234455555666  46666543

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK10206 putative oxidoreductase; Provisional

Probab=94.10  E-value=0.71  Score=44.16  Aligned_cols=130  Identities=11%  Similarity=0.009  Sum_probs=77.8

Q ss_pred             EEEEECCChHH-HHHHH-HHHH-cCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          204 TVVIFGLGSIG-LAVAE-GARL-CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       204 ~vlI~Gag~~G-~~a~~-la~~-~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      +|.|+|.|.++ ...+. +... -+++.+.+.++++++.+.+++++...++       .++.+.+.   ...+|+|+.++
T Consensus         3 rvgiiG~G~~~~~~h~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~-------~~~~ell~---~~~iD~V~I~t   72 (344)
T PRK10206          3 NCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFT-------SDLDEVLN---DPDVKLVVVCT   72 (344)
T ss_pred             EEEEECCCHHHhheehhhHhcCCCCEEEEEEEcCChhHHHHHHhcCCCccc-------CCHHHHhc---CCCCCEEEEeC
Confidence            57899998765 33343 3233 3563444566665555556666532222       22333332   22799999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHH-------HHhcCcEEEEeeccCCCccccHHHHHHHHHcCCc
Q 018022          281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFE-------VLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWS  352 (362)
Q Consensus       281 g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~-------~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l  352 (362)
                      ......+.+..+++.  |+-|++-.     ++..+..+       ...+++.+.-.+...+  ...+..+-+++++|+|
T Consensus        73 p~~~H~~~~~~al~a--GkhVl~EK-----Pla~~~~ea~~l~~~a~~~~~~l~v~~~~R~--~p~~~~~k~li~~g~i  142 (344)
T PRK10206         73 HADSHFEYAKRALEA--GKNVLVEK-----PFTPTLAEAKELFALAKSKGLTVTPYQNRRF--DSCFLTAKKAIESGKL  142 (344)
T ss_pred             CchHHHHHHHHHHHc--CCcEEEec-----CCcCCHHHHHHHHHHHHHhCCEEEEEEeeeE--CHHHHHHHHHHHcCCC
Confidence            998878999999988  57777743     23333322       2234566554433222  3567888888888876

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=94.10  E-value=0.35  Score=49.98  Aligned_cols=96  Identities=9%  Similarity=0.077  Sum_probs=67.7

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      .++|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...++- +.    .-.+.+++.--..+|.++-+++
T Consensus       400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~G-Da----t~~~~L~~agi~~A~~vv~~~~  473 (601)
T PRK03659        400 KPQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYG-DA----TQLELLRAAGAEKAEAIVITCN  473 (601)
T ss_pred             cCCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEe-eC----CCHHHHHhcCCccCCEEEEEeC
Confidence            3579999999999999999999999 9999999999999999988754432 21    1123333332227999999999


Q ss_pred             CHHHHHHH---HHHhccCCceEEEEc
Q 018022          282 LASLVQEA---YACCRKGWGKTIVLG  304 (362)
Q Consensus       282 ~~~~~~~~---~~~l~~~~G~iv~~G  304 (362)
                      ++..-..+   .+...++ -+++.-.
T Consensus       474 d~~~n~~i~~~~r~~~p~-~~IiaRa  498 (601)
T PRK03659        474 EPEDTMKIVELCQQHFPH-LHILARA  498 (601)
T ss_pred             CHHHHHHHHHHHHHHCCC-CeEEEEe
Confidence            87533233   3444454 5665543

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=94.07  E-value=0.72  Score=41.99  Aligned_cols=97  Identities=23%  Similarity=0.163  Sum_probs=68.1

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHc-CCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhc-C
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT-D  270 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~-~  270 (362)
                      +.......++++||=+|+|. |..+..+++.. +. +|++++.++.-++.+++.+.+. +..      +..    ++. .
T Consensus        21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~-~~~------d~~----~~~~~   87 (255)
T PRK14103         21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDA-RTG------DVR----DWKPK   87 (255)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcE-EEc------Chh----hCCCC
Confidence            44556678889999999866 66677777765 45 9999999999888887765442 221      111    111 2


Q ss_pred             CCccEEEEcCC-----C-HHHHHHHHHHhccCCceEEEE
Q 018022          271 GGADYCFECVG-----L-ASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       271 ~g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~  303 (362)
                      +.||+|+-...     . ...+..+.+.|+++ |++++.
T Consensus        88 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~  125 (255)
T PRK14103         88 PDTDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ  125 (255)
T ss_pred             CCceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence            37999998543     2 34577899999998 998865

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.04  E-value=0.51  Score=43.95  Aligned_cols=85  Identities=26%  Similarity=0.346  Sum_probs=56.5

Q ss_pred             CCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcE-E--EcCCCCCC---ccHHHHHHhhc
Q 018022          198 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTE-F--VNSKNCGD---KSVSQIIIDMT  269 (362)
Q Consensus       198 ~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~-v--v~~~~~~~---~~~~~~i~~~~  269 (362)
                      +.++..+++|+|. .++|++.+.-++..|+ .|..+.++.+|+..+++ ++... +  |.+...+-   +.....+.++.
T Consensus        29 ~~k~~~hi~itggS~glgl~la~e~~~~ga-~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~  107 (331)
T KOG1210|consen   29 KPKPRRHILITGGSSGLGLALALECKREGA-DVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELR  107 (331)
T ss_pred             ccCccceEEEecCcchhhHHHHHHHHHccC-ceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhh
Confidence            3455578999976 9999999999999999 99999999999887764 44321 1  22222000   11222333332


Q ss_pred             --CCCccEEEEcCCCH
Q 018022          270 --DGGADYCFECVGLA  283 (362)
Q Consensus       270 --~~g~d~vid~~g~~  283 (362)
                        .+.+|.+|.|.|+.
T Consensus       108 ~~~~~~d~l~~cAG~~  123 (331)
T KOG1210|consen  108 DLEGPIDNLFCCAGVA  123 (331)
T ss_pred             hccCCcceEEEecCcc
Confidence              23689999999973

>PRK07023 short chain dehydrogenase; Provisional

Probab=94.03  E-value=0.79  Score=41.02  Aligned_cols=75  Identities=16%  Similarity=0.218  Sum_probs=46.0

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE---EEcCCCCCCccHHHHHHh-----hcCC-Cc
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE---FVNSKNCGDKSVSQIIID-----MTDG-GA  273 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~i~~-----~~~~-g~  273 (362)
                      ++||+|+ |.+|...++.+...|+ +|++++++.++. .....+...   ..|-.+  .+++.+.+.+     +... ..
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~-~v~~~~r~~~~~-~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~~~~~   78 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGI-AVLGVARSRHPS-LAAAAGERLAEVELDLSD--AAAAAAWLAGDLLAAFVDGASR   78 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCC-EEEEEecCcchh-hhhccCCeEEEEEeccCC--HHHHHHHHHHHHHHHhccCCCc
Confidence            6899998 9999999999888999 888888776542 223333221   123222  1233332322     1122 67


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        79 ~~~v~~ag~   87 (243)
T PRK07023         79 VLLINNAGT   87 (243)
T ss_pred             eEEEEcCcc
Confidence            889988774

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=94.02  E-value=0.31  Score=44.78  Aligned_cols=105  Identities=16%  Similarity=0.214  Sum_probs=67.5

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC-cEEEcCCCCCCccHHHHHHhhcCC
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDG  271 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~i~~~~~~  271 (362)
                      +....+++++.+||=+|+|. |..+..+++..+. +|++++.+++-.+.+++... ...+....   .++.+  ..+.++
T Consensus        44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~---~D~~~--~~~~~~  116 (263)
T PTZ00098         44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEA---NDILK--KDFPEN  116 (263)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEE---CCccc--CCCCCC
Confidence            45667889999999999864 5556667776777 99999999888887776321 11011101   11110  011123


Q ss_pred             CccEEEEcC-----C---CHHHHHHHHHHhccCCceEEEEcc
Q 018022          272 GADYCFECV-----G---LASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       272 g~d~vid~~-----g---~~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      .||+|+..-     +   -...++.+.+.|+|+ |++++...
T Consensus       117 ~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~  157 (263)
T PTZ00098        117 TFDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDY  157 (263)
T ss_pred             CeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            699998621     1   124577889999998 99988754

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=94.01  E-value=0.67  Score=44.00  Aligned_cols=105  Identities=17%  Similarity=0.117  Sum_probs=67.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHH-HcCCCEEEEEcCCchHHHHH-Hhc----CCcEEEcCCCCCCccHHHHHHhhcCCCc
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIG-KRF----GVTEFVNSKNCGDKSVSQIIIDMTDGGA  273 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~-~~g~~~vi~~~~~~~~~~~~-~~~----g~~~vv~~~~~~~~~~~~~i~~~~~~g~  273 (362)
                      +...+++|+|+|..+.+.+..+. ..++++|.+.+++.+|.+.+ +++    |.. +...+     ++.+.+.     ..
T Consensus       127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~~-----~~~~av~-----~a  195 (326)
T TIGR02992       127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAAT-----DPRAAMS-----GA  195 (326)
T ss_pred             CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEeC-----CHHHHhc-----cC
Confidence            45678999999999988887776 57888999999999887654 333    432 22222     2333332     59


Q ss_pred             cEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHH
Q 018022          274 DYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFE  318 (362)
Q Consensus       274 d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~  318 (362)
                      |+|+.|++....+- -...++++ -.+..+|.+.+ ..-+++..-
T Consensus       196 DiVvtaT~s~~p~i-~~~~l~~g-~~i~~vg~~~p-~~rEld~~~  237 (326)
T TIGR02992       196 DIIVTTTPSETPIL-HAEWLEPG-QHVTAMGSDAE-HKNEIDPAV  237 (326)
T ss_pred             CEEEEecCCCCcEe-cHHHcCCC-cEEEeeCCCCC-CceecCHHH
Confidence            99999998754211 12357885 67777886532 233555443

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=93.99  E-value=0.61  Score=46.02  Aligned_cols=104  Identities=13%  Similarity=0.178  Sum_probs=65.2

Q ss_pred             HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EE--EcCCCCCCccHHHHHH
Q 018022          194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSVSQIII  266 (362)
Q Consensus       194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~v--v~~~~~~~~~~~~~i~  266 (362)
                      ....++++|++||=.|+|+ |..+..+++.++..+|++++.++++++.++    ++|.. .+  ++.+.   ..... . 
T Consensus       231 ~~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~---~~~~~-~-  304 (426)
T TIGR00563       231 ATWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDG---RGPSQ-W-  304 (426)
T ss_pred             HHHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccc---ccccc-c-
Confidence            3556788999999988755 444555556555339999999999987764    35654 22  22211   11100 0 


Q ss_pred             hhcCCCccEEEE---cCCC-------------------------HHHHHHHHHHhccCCceEEEEcc
Q 018022          267 DMTDGGADYCFE---CVGL-------------------------ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       267 ~~~~~g~d~vid---~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                       ...+.||.||-   |+|.                         ...+..+++.++++ |+++..-.
T Consensus       305 -~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvystc  369 (426)
T TIGR00563       305 -AENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYATC  369 (426)
T ss_pred             -ccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeC
Confidence             01226999885   4442                         13567788999998 99986644

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.97  E-value=0.31  Score=44.41  Aligned_cols=79  Identities=20%  Similarity=0.341  Sum_probs=48.6

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHcCCCEEEEEcCC---chHHHHH-HhcCCcEEE--cCCCCCCccHHHHHHhhcC-
Q 018022          201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVI---SEKFEIG-KRFGVTEFV--NSKNCGDKSVSQIIIDMTD-  270 (362)
Q Consensus       201 ~g~~vlI~Ga---g~~G~~a~~la~~~g~~~vi~~~~~---~~~~~~~-~~~g~~~vv--~~~~~~~~~~~~~i~~~~~-  270 (362)
                      .+.++||+|+   +++|++.++.+...|+ +|+.+.+.   .++++.+ ++++....+  |-.+  ++++.+.+.+... 
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~   81 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVAS--DEQIDALFASLGQH   81 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCC--HHHHHHHHHHHHHH
Confidence            4678999984   5899999988888999 88777543   3333333 334432222  2222  2334444444322 


Q ss_pred             -CCccEEEEcCCC
Q 018022          271 -GGADYCFECVGL  282 (362)
Q Consensus       271 -~g~d~vid~~g~  282 (362)
                       +.+|++|.+.|.
T Consensus        82 ~g~iD~lvnnAG~   94 (260)
T PRK06997         82 WDGLDGLVHSIGF   94 (260)
T ss_pred             hCCCcEEEEcccc
Confidence             379999998874

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=93.97  E-value=0.42  Score=42.59  Aligned_cols=79  Identities=25%  Similarity=0.297  Sum_probs=47.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchH-HHH----HHhcCCc-EEE--cCCCCCCccHHHHHHhhcC-
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FEI----GKRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~-~~~----~~~~g~~-~vv--~~~~~~~~~~~~~i~~~~~-  270 (362)
                      .+.++||+|+ |.+|...+..+...|+ +|+++.++..+ .+.    ++..+.. .++  |-.+  ...+.+.+.+... 
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~   80 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD--AESVERAVDEAKAE   80 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            3568999998 9999999999999999 77666655442 221    2222322 222  2222  2333333333322 


Q ss_pred             -CCccEEEEcCCC
Q 018022          271 -GGADYCFECVGL  282 (362)
Q Consensus       271 -~g~d~vid~~g~  282 (362)
                       +++|.+|.+.|.
T Consensus        81 ~~~id~vi~~ag~   93 (248)
T PRK05557         81 FGGVDILVNNAGI   93 (248)
T ss_pred             cCCCCEEEECCCc
Confidence             268999999874

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=93.97  E-value=0.53  Score=41.93  Aligned_cols=46  Identities=26%  Similarity=0.330  Sum_probs=37.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc----------hHHHHHHhcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS----------EKFEIGKRFG  246 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~----------~~~~~~~~~g  246 (362)
                      .|.+|+|.|-|.+|+.+++++...|.+.|.++|.+.          +.++..++.+
T Consensus        22 ~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~   77 (217)
T cd05211          22 EGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALG   77 (217)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhC
Confidence            578999999999999999999999986677777776          6666665544

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating)

Probab=93.95  E-value=0.54  Score=43.68  Aligned_cols=88  Identities=19%  Similarity=0.265  Sum_probs=57.4

Q ss_pred             EEEEECCChHHHHH-HHHHHHcCCCEEEEEcCCchH--HHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          204 TVVIFGLGSIGLAV-AEGARLCGATRIIGVDVISEK--FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       204 ~vlI~Gag~~G~~a-~~la~~~g~~~vi~~~~~~~~--~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      +|.|+|+|.+|... ..+.+..+.+-+-+++.+.++  ++.++++|......       ++...+.   ...+|+|++++
T Consensus         3 rVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~~-------~~e~ll~---~~dIDaV~iaT   72 (285)
T TIGR03215         3 KVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARARELGVKTSAE-------GVDGLLA---NPDIDIVFDAT   72 (285)
T ss_pred             EEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEEC-------CHHHHhc---CCCCCEEEECC
Confidence            58899999999865 555555567334445555543  56677888764432       2222222   12699999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEE
Q 018022          281 GLASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       281 g~~~~~~~~~~~l~~~~G~iv~~  303 (362)
                      +.....+.+..++..  |+.++.
T Consensus        73 p~~~H~e~a~~al~a--Gk~VId   93 (285)
T TIGR03215        73 SAKAHARHARLLAEL--GKIVID   93 (285)
T ss_pred             CcHHHHHHHHHHHHc--CCEEEE
Confidence            998777777777777  455544

Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=93.94  E-value=0.27  Score=46.96  Aligned_cols=77  Identities=13%  Similarity=0.043  Sum_probs=48.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHH-HHhcC--C-cEEEcCCCCCCccHHHHHHhhcCC-Ccc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFG--V-TEFVNSKNCGDKSVSQIIIDMTDG-GAD  274 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~-~~~~g--~-~~vv~~~~~~~~~~~~~i~~~~~~-g~d  274 (362)
                      .+.+|||+|+ |.+|...++.+...|. +|++++++...... .+.++  . ...+..+-   .+ .+.+.++..+ ++|
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl---~~-~~~~~~~~~~~~~d   77 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDI---RD-AAKLRKAIAEFKPE   77 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccC---CC-HHHHHHHHhhcCCC
Confidence            3678999998 9999999999999998 89998877654322 12222  1 11121111   11 2233444334 689


Q ss_pred             EEEEcCCC
Q 018022          275 YCFECVGL  282 (362)
Q Consensus       275 ~vid~~g~  282 (362)
                      +||.+.+.
T Consensus        78 ~vih~A~~   85 (349)
T TIGR02622        78 IVFHLAAQ   85 (349)
T ss_pred             EEEECCcc
Confidence            99999873

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=93.93  E-value=0.84  Score=43.27  Aligned_cols=36  Identities=36%  Similarity=0.484  Sum_probs=33.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE  237 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~  237 (362)
                      .|.++.|+|.|.||.+.++.++..|. +|+..+++..
T Consensus       145 ~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~  180 (324)
T COG1052         145 RGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN  180 (324)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC
Confidence            48899999999999999999999999 9999998764

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=93.93  E-value=0.4  Score=46.24  Aligned_cols=98  Identities=22%  Similarity=0.260  Sum_probs=63.9

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHc--CCCEEEEEc--CCchHH-HHHHhcCCcEEEcCCCCCCccHH--------------
Q 018022          203 STVVIFGL-GSIGLAVAEGARLC--GATRIIGVD--VISEKF-EIGKRFGVTEFVNSKNCGDKSVS--------------  262 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~--g~~~vi~~~--~~~~~~-~~~~~~g~~~vv~~~~~~~~~~~--------------  262 (362)
                      .+|.|+|+ |.+|..++.+.+..  .+ +|+++.  ++.+++ +.+++++...++-.++.....+.              
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~   80 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE   80 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence            47899997 99999999988765  56 666664  444454 44667888776654430001111              


Q ss_pred             HHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 018022          263 QIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       263 ~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  303 (362)
                      +.+.++..- .+|+|+.++++...+...+.+++.+  +-+.+
T Consensus        81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG--K~VaL  120 (385)
T PRK05447         81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG--KRIAL  120 (385)
T ss_pred             hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC--CcEEE
Confidence            122223222 5899999999886688899999884  44444

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=93.93  E-value=0.34  Score=45.59  Aligned_cols=78  Identities=22%  Similarity=0.189  Sum_probs=50.6

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHH-HhcCC--c--EEE--cCCCCCCccHHHHHHhhc--C
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCG-ATRIIGVDVISEKFEIG-KRFGV--T--EFV--NSKNCGDKSVSQIIIDMT--D  270 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~-~~~g~--~--~vv--~~~~~~~~~~~~~i~~~~--~  270 (362)
                      +.+++|+|+ +++|.+.++.+...| + +|+.++++.++.+.+ ++++.  .  +++  |-.+  ..++.+.+.++.  .
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~   79 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGS--LDSVRQFVQQFRESG   79 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCC--HHHHHHHHHHHHHhC
Confidence            568999998 999999988888889 7 999999888776544 33321  1  122  3222  123333333332  2


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +++|++|.+.|.
T Consensus        80 ~~iD~lI~nAG~   91 (314)
T TIGR01289        80 RPLDALVCNAAV   91 (314)
T ss_pred             CCCCEEEECCCc
Confidence            379999998874

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK00536 speE spermidine synthase; Provisional

Probab=93.90  E-value=0.31  Score=44.64  Aligned_cols=100  Identities=13%  Similarity=-0.035  Sum_probs=66.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc-CC-cEEEcCCCCCCccHHHHHHhhcCCCccEEE
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCF  277 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-g~-~~vv~~~~~~~~~~~~~i~~~~~~g~d~vi  277 (362)
                      +..++|||+|+|- |.++-+++|..  ++|..++.+++-.+.++++ .. ...++.-.   -.+...+.+...+.||+||
T Consensus        71 ~~pk~VLIiGGGD-Gg~~REvLkh~--~~v~mVeID~~Vv~~~k~~lP~~~~~~~DpR---v~l~~~~~~~~~~~fDVII  144 (262)
T PRK00536         71 KELKEVLIVDGFD-LELAHQLFKYD--THVDFVQADEKILDSFISFFPHFHEVKNNKN---FTHAKQLLDLDIKKYDLII  144 (262)
T ss_pred             CCCCeEEEEcCCc-hHHHHHHHCcC--CeeEEEECCHHHHHHHHHHCHHHHHhhcCCC---EEEeehhhhccCCcCCEEE
Confidence            5668999998755 55666777775  3999999999999988883 21 11111111   1222233333334799877


Q ss_pred             Ec-CCCHHHHHHHHHHhccCCceEEEEccC
Q 018022          278 EC-VGLASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       278 d~-~g~~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      -- +-.+...+.+.+.|+++ |.++.-+.+
T Consensus       145 vDs~~~~~fy~~~~~~L~~~-Gi~v~Qs~s  173 (262)
T PRK00536        145 CLQEPDIHKIDGLKRMLKED-GVFISVAKH  173 (262)
T ss_pred             EcCCCChHHHHHHHHhcCCC-cEEEECCCC
Confidence            54 66777788999999998 999887653

>PRK06849 hypothetical protein; Provisional

Probab=93.90  E-value=0.49  Score=46.01  Aligned_cols=95  Identities=15%  Similarity=0.042  Sum_probs=62.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC-CcEEEcCCCCCCccHHHHHHhhcCC-CccEEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-VTEFVNSKNCGDKSVSQIIIDMTDG-GADYCF  277 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g-~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vi  277 (362)
                      ...+|||+|+ .+.|+..++.++..|+ +|++++.++.......+.- ....+.....+++.+.+.+.++... ++|++|
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~vI   81 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLLI   81 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence            4578999998 6689999999999999 9999998865544332211 1122321111235577888887766 899999


Q ss_pred             EcCCCHHHHHHHHHHhccC
Q 018022          278 ECVGLASLVQEAYACCRKG  296 (362)
Q Consensus       278 d~~g~~~~~~~~~~~l~~~  296 (362)
                      -+......+......+.+.
T Consensus        82 P~~e~~~~~a~~~~~l~~~  100 (389)
T PRK06849         82 PTCEEVFYLSHAKEELSAY  100 (389)
T ss_pred             ECChHHHhHHhhhhhhcCC
Confidence            8876433333444556654

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=93.90  E-value=0.24  Score=40.17  Aligned_cols=88  Identities=20%  Similarity=0.261  Sum_probs=52.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEc-CCchHHHHHHh-cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVD-VISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~-~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      +.-+|-|+|+|.+|......++..|+ .|..+. ++.+..+.+.. ++...+.+..+            ... .+|++|-
T Consensus         9 ~~l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~------------~~~-~aDlv~i   74 (127)
T PF10727_consen    9 ARLKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE------------ILR-DADLVFI   74 (127)
T ss_dssp             ---EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG------------GGC-C-SEEEE
T ss_pred             CccEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc------------ccc-cCCEEEE
Confidence            34578999999999999999999999 777774 44555555554 44333333221            111 5899999


Q ss_pred             cCCCHHHHHHHHHHhccC----CceEEEE
Q 018022          279 CVGLASLVQEAYACCRKG----WGKTIVL  303 (362)
Q Consensus       279 ~~g~~~~~~~~~~~l~~~----~G~iv~~  303 (362)
                      ++.... +..+...|...    .|++++-
T Consensus        75 avpDda-I~~va~~La~~~~~~~g~iVvH  102 (127)
T PF10727_consen   75 AVPDDA-IAEVAEQLAQYGAWRPGQIVVH  102 (127)
T ss_dssp             -S-CCH-HHHHHHHHHCC--S-TT-EEEE
T ss_pred             EechHH-HHHHHHHHHHhccCCCCcEEEE
Confidence            999886 77777766642    1565544

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=93.88  E-value=0.61  Score=41.61  Aligned_cols=85  Identities=11%  Similarity=0.167  Sum_probs=56.7

Q ss_pred             EEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCch--HHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          205 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       205 vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~--~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      |+|+|+ |.+|...++.+...++ +|.++.|+..  +.+.++..|+..+ ..+-    +-.+.+.+... |+|.||.+++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~----~~~~~l~~al~-g~d~v~~~~~   73 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV-EADY----DDPESLVAALK-GVDAVFSVTP   73 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE-ES-T----T-HHHHHHHHT-TCSEEEEESS
T ss_pred             CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe-eccc----CCHHHHHHHHc-CCceEEeecC
Confidence            789998 9999999999999888 8888888764  3566777888543 3222    11334444333 6999999999


Q ss_pred             C---HH--HHHHHHHHhccC
Q 018022          282 L---AS--LVQEAYACCRKG  296 (362)
Q Consensus       282 ~---~~--~~~~~~~~l~~~  296 (362)
                      .   ..  ....++++.+.-
T Consensus        74 ~~~~~~~~~~~~li~Aa~~a   93 (233)
T PF05368_consen   74 PSHPSELEQQKNLIDAAKAA   93 (233)
T ss_dssp             CSCCCHHHHHHHHHHHHHHH
T ss_pred             cchhhhhhhhhhHHHhhhcc
Confidence            3   21  123455555553

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK08278 short chain dehydrogenase; Provisional

Probab=93.86  E-value=0.37  Score=44.26  Aligned_cols=79  Identities=25%  Similarity=0.331  Sum_probs=49.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchH-------HH----HHHhcCCcE-E--EcCCCCCCccHHHHH
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-------FE----IGKRFGVTE-F--VNSKNCGDKSVSQII  265 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~-------~~----~~~~~g~~~-v--v~~~~~~~~~~~~~i  265 (362)
                      .+.++||+|+ |.+|...+..+...|+ +|++++++.++       ++    .++..+... +  .|-.+  .+.+.+.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~   81 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRD--EDQVAAAV   81 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHH
Confidence            4578999998 9999999999888999 89988876542       11    122233322 2  23222  23333333


Q ss_pred             HhhcC--CCccEEEEcCCC
Q 018022          266 IDMTD--GGADYCFECVGL  282 (362)
Q Consensus       266 ~~~~~--~g~d~vid~~g~  282 (362)
                      .+...  +.+|++|.+.|.
T Consensus        82 ~~~~~~~g~id~li~~ag~  100 (273)
T PRK08278         82 AKAVERFGGIDICVNNASA  100 (273)
T ss_pred             HHHHHHhCCCCEEEECCCC
Confidence            33221  269999999885

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.86  E-value=0.52  Score=43.78  Aligned_cols=82  Identities=17%  Similarity=0.271  Sum_probs=58.2

Q ss_pred             HHhcCC-CCCCEEEEECCCh-HHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC
Q 018022          194 WRTANV-EVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG  271 (362)
Q Consensus       194 ~~~~~~-~~g~~vlI~Gag~-~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~  271 (362)
                      .+..++ -.|.+|+|+|+|. +|...+.++...|+ +|+++.+..                      .++.+.+     .
T Consensus       150 L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t----------------------~~L~~~~-----~  201 (283)
T PRK14192        150 LKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRT----------------------QNLPELV-----K  201 (283)
T ss_pred             HHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCc----------------------hhHHHHh-----c
Confidence            333443 4788999999976 99999999999999 888876421                      1222222     1


Q ss_pred             CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022          272 GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       272 g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      .+|++|.++|.+..+.  .+.++++ ..++.+|..
T Consensus       202 ~aDIvI~AtG~~~~v~--~~~lk~g-avViDvg~n  233 (283)
T PRK14192        202 QADIIVGAVGKPELIK--KDWIKQG-AVVVDAGFH  233 (283)
T ss_pred             cCCEEEEccCCCCcCC--HHHcCCC-CEEEEEEEe
Confidence            5899999999776443  2558886 788888864

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=93.82  E-value=0.89  Score=39.92  Aligned_cols=96  Identities=18%  Similarity=0.238  Sum_probs=64.4

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc--EEEcCCCCCCccHHHHHHhhc-CCCc
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIIIDMT-DGGA  273 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~--~vv~~~~~~~~~~~~~i~~~~-~~g~  273 (362)
                      ++.+||-+|+|. |..+..+++.....++++++.+++..+.+++    .+..  .++.      .+..+.+.... .+.+
T Consensus        40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~------~d~~~~l~~~~~~~~~  112 (202)
T PRK00121         40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLC------GDAVEVLLDMFPDGSL  112 (202)
T ss_pred             CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEe------cCHHHHHHHHcCcccc
Confidence            677888889876 7777777776644489999999998887764    2332  2222      22323333323 3378


Q ss_pred             cEEEEcCC--------------CHHHHHHHHHHhccCCceEEEEc
Q 018022          274 DYCFECVG--------------LASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       274 d~vid~~g--------------~~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      |.|+-...              ....++.+.+.|+++ |.+++.-
T Consensus       113 D~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~  156 (202)
T PRK00121        113 DRIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT  156 (202)
T ss_pred             ceEEEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence            98886433              234588999999998 9998764

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=93.82  E-value=0.67  Score=40.66  Aligned_cols=34  Identities=32%  Similarity=0.488  Sum_probs=30.3

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      ..+|+|+|+|++|...+..+.+.|+.+++.+|.+
T Consensus        19 ~s~VlviG~gglGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          19 SAKVLIIGAGALGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             hCcEEEECCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence            3789999999999999999999999889888754

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=93.81  E-value=0.2  Score=45.60  Aligned_cols=76  Identities=17%  Similarity=0.278  Sum_probs=48.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADYC  276 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d~v  276 (362)
                      .+.++||+|+ |.+|.+.++.+...|+ +|+.++++.++.+.   ..... ..|-.+  ..++.+.+.+...  +.+|++
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~id~l   81 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSS--AEEVNHTVAEIIEKFGRIDGL   81 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            4678999998 9999999999999999 88888877655421   11111 123222  2333333333321  368999


Q ss_pred             EEcCCC
Q 018022          277 FECVGL  282 (362)
Q Consensus       277 id~~g~  282 (362)
                      |.+.|.
T Consensus        82 i~~Ag~   87 (266)
T PRK06171         82 VNNAGI   87 (266)
T ss_pred             EECCcc
Confidence            998873

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=93.79  E-value=0.29  Score=51.28  Aligned_cols=81  Identities=22%  Similarity=0.300  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-h----cCCc--EEEcCCCCCCccHHHHHHhhc--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-R----FGVT--EFVNSKNCGDKSVSQIIIDMT--D  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~----~g~~--~vv~~~~~~~~~~~~~i~~~~--~  270 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+. +    .+..  ..+..+-.+..++.+.+.+..  -
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~  491 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY  491 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            3688999998 9999999999988999 9999999887765442 2    2321  122111101233333343332  1


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +++|++|.+.|.
T Consensus       492 g~iDilV~nAG~  503 (676)
T TIGR02632       492 GGVDIVVNNAGI  503 (676)
T ss_pred             CCCcEEEECCCC
Confidence            379999999984

>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type

Probab=93.78  E-value=1  Score=42.76  Aligned_cols=105  Identities=15%  Similarity=0.115  Sum_probs=67.6

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHH-HcCCCEEEEEcCCchHHHHHH----hcCCcEEEcCCCCCCccHHHHHHhhcCCCc
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDMTDGGA  273 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~-~~g~~~vi~~~~~~~~~~~~~----~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~  273 (362)
                      .+...++.|+|+|..|.+.++... ....++|.+.+++.++.+.+.    ++|.. +...     .+..+.++     +.
T Consensus       125 ~~~~~~lgiiG~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~-v~~~-----~~~~eav~-----~a  193 (325)
T TIGR02371       125 RKDSSVLGIIGAGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVP-VRAA-----TDPREAVE-----GC  193 (325)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCc-EEEe-----CCHHHHhc-----cC
Confidence            355678999999999998766554 456779999999999876543    33432 1111     22333332     58


Q ss_pred             cEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH
Q 018022          274 DYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF  317 (362)
Q Consensus       274 d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~  317 (362)
                      |+|+-|+++...+ -....++++ -.++.+|.+.++. -+++..
T Consensus       194 DiVitaT~s~~P~-~~~~~l~~g-~~v~~vGs~~p~~-~Eld~~  234 (325)
T TIGR02371       194 DILVTTTPSRKPV-VKADWVSEG-THINAIGADAPGK-QELDPE  234 (325)
T ss_pred             CEEEEecCCCCcE-ecHHHcCCC-CEEEecCCCCccc-ccCCHH
Confidence            9999998765311 123567896 7888999764432 355543

This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.

>TIGR00417 speE spermidine synthase

Probab=93.78  E-value=1  Score=41.47  Aligned_cols=97  Identities=13%  Similarity=0.112  Sum_probs=62.1

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC-C-------c--EEEcCCCCCCccHHHHHHhhc
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-V-------T--EFVNSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g-~-------~--~vv~~~~~~~~~~~~~i~~~~  269 (362)
                      +.+.+||++|+|. |..+..+++.....++++++.+++-.+.+++.- .       .  .++.      .+..+.+++. 
T Consensus        71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~------~D~~~~l~~~-  142 (270)
T TIGR00417        71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQI------DDGFKFLADT-  142 (270)
T ss_pred             CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEE------CchHHHHHhC-
Confidence            4456999998865 445556666655669999999888777776631 0       0  1111      2333334332 


Q ss_pred             CCCccEEEEcCC----------CHHHHHHHHHHhccCCceEEEEcc
Q 018022          270 DGGADYCFECVG----------LASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       270 ~~g~d~vid~~g----------~~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      .+.+|+||-...          ....++.+.+.|+++ |.+++...
T Consensus       143 ~~~yDvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~~  187 (270)
T TIGR00417       143 ENTFDVIIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQSE  187 (270)
T ss_pred             CCCccEEEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcCC
Confidence            347999986433          224467888999998 99988744

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.74  E-value=1.9  Score=38.96  Aligned_cols=32  Identities=25%  Similarity=0.312  Sum_probs=27.1

Q ss_pred             CCCEEEEECCC---hHHHHHHHHHHHcCCCEEEEEc
Q 018022          201 VGSTVVIFGLG---SIGLAVAEGARLCGATRIIGVD  233 (362)
Q Consensus       201 ~g~~vlI~Gag---~~G~~a~~la~~~g~~~vi~~~  233 (362)
                      ++.++||+|++   ++|.+.+..+...|+ +|++++
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~-~vi~~~   39 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGA-DIFFTY   39 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCC-eEEEEe
Confidence            57899999983   799999999999999 777764

>PRK14903 16S rRNA methyltransferase B; Provisional

Probab=93.73  E-value=1.4  Score=43.51  Aligned_cols=102  Identities=20%  Similarity=0.272  Sum_probs=65.6

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHH----hcCCcE--EEcCCCCCCccHHHHHHh
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGK----RFGVTE--FVNSKNCGDKSVSQIIID  267 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~----~~g~~~--vv~~~~~~~~~~~~~i~~  267 (362)
                      ...++++|++||=.|+|+ |.-+..++..++ ...|+++|.++++++.++    ++|.+.  ++..+.   .++    .+
T Consensus       231 ~~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da---~~l----~~  302 (431)
T PRK14903        231 LLMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADA---ERL----TE  302 (431)
T ss_pred             HHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECch---hhh----hh
Confidence            456788999988888765 555556666652 239999999999988875    356653  222221   111    11


Q ss_pred             hcCCCccEEEE---cCCCH-------------------------HHHHHHHHHhccCCceEEEEcc
Q 018022          268 MTDGGADYCFE---CVGLA-------------------------SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       268 ~~~~g~d~vid---~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ...+.||.|+-   |+|..                         ..+..+++.++++ |+++..-.
T Consensus       303 ~~~~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTC  367 (431)
T PRK14903        303 YVQDTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKG-GILLYSTC  367 (431)
T ss_pred             hhhccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEEC
Confidence            22336999985   44331                         2256788999998 99876654

>PRK04266 fibrillarin; Provisional

Probab=93.70  E-value=1.6  Score=39.13  Aligned_cols=102  Identities=13%  Similarity=0.156  Sum_probs=62.2

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc----CCcEEEcCCCCCCccHHHHHHhhcC
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~~i~~~~~  270 (362)
                      +...+++|++||=.|+|. |..+..+++..+..+|++++.+++.++.+.+.    .--..+..+.   .+. .....+. 
T Consensus        66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~---~~~-~~~~~l~-  139 (226)
T PRK04266         66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADA---RKP-ERYAHVV-  139 (226)
T ss_pred             hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCC---CCc-chhhhcc-
Confidence            457889999999998754 44555666665433899999999877644322    1112222222   110 0001111 


Q ss_pred             CCccEEEEcCCCH----HHHHHHHHHhccCCceEEEE
Q 018022          271 GGADYCFECVGLA----SLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       271 ~g~d~vid~~g~~----~~~~~~~~~l~~~~G~iv~~  303 (362)
                      +.+|+++-....+    ..++.+.+.|+++ |++++.
T Consensus       140 ~~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~  175 (226)
T PRK04266        140 EKVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA  175 (226)
T ss_pred             ccCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence            2599999654433    2367888899998 999884

>PRK09135 pteridine reductase; Provisional

Probab=93.66  E-value=0.49  Score=42.25  Aligned_cols=79  Identities=14%  Similarity=0.111  Sum_probs=48.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc-hHHHHHH----hcCC--cEEE--cCCCCCCccHHHHHHhhcC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFEIGK----RFGV--TEFV--NSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~-~~~~~~~----~~g~--~~vv--~~~~~~~~~~~~~i~~~~~  270 (362)
                      .+.++||+|+ |.+|...++.+...|+ +|++++++. ++.+.+.    +...  .+++  |-.+  .+.+.+.+.+...
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~   81 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLD--PDALPELVAACVA   81 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCC--HHHHHHHHHHHHH
Confidence            4578999998 9999999988888999 888888753 3333322    2111  1122  2222  1233333333211


Q ss_pred             --CCccEEEEcCCC
Q 018022          271 --GGADYCFECVGL  282 (362)
Q Consensus       271 --~g~d~vid~~g~  282 (362)
                        +++|++|.+.|.
T Consensus        82 ~~~~~d~vi~~ag~   95 (249)
T PRK09135         82 AFGRLDALVNNASS   95 (249)
T ss_pred             HcCCCCEEEECCCC
Confidence              268999999983

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=93.63  E-value=0.72  Score=42.99  Aligned_cols=108  Identities=15%  Similarity=0.095  Sum_probs=71.5

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC-C----cEEEcCCCCCCcc---HHHHHHhhcC
Q 018022          200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-V----TEFVNSKNCGDKS---VSQIIIDMTD  270 (362)
Q Consensus       200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g-~----~~vv~~~~~~~~~---~~~~i~~~~~  270 (362)
                      -.+..|+|+|+ +++|...+.-+...|+ +|++..-.++..+.++.-- -    +-.+|-.+  ++.   ..+.+++..+
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~--~esi~~a~~~V~~~l~  103 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETKSPRLRTLQLDVTK--PESVKEAAQWVKKHLG  103 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhcCCcceeEeeccCC--HHHHHHHHHHHHHhcc
Confidence            44566999998 9999999999999999 9998888777766665321 1    11233222  122   3344555555


Q ss_pred             C-CccEEEEcCCCH--------------------------HHHHHHHHHhccCCceEEEEccCCCCC
Q 018022          271 G-GADYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVDQPGS  310 (362)
Q Consensus       271 ~-g~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~~~~~  310 (362)
                      . +.-.++++.|..                          ......+..+++-.||++.++...+..
T Consensus       104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~  170 (322)
T KOG1610|consen  104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRV  170 (322)
T ss_pred             cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCc
Confidence            5 788889988832                          223445566666569999998755443

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=93.61  E-value=0.93  Score=39.12  Aligned_cols=99  Identities=15%  Similarity=0.219  Sum_probs=64.1

Q ss_pred             HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcE--EEcCCCCCCccHHHHHHh
Q 018022          194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIIID  267 (362)
Q Consensus       194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~--vv~~~~~~~~~~~~~i~~  267 (362)
                      .....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++    ++...  ++..+      ...    
T Consensus        24 ~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~d------~~~----   92 (187)
T PRK08287         24 LSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPGE------API----   92 (187)
T ss_pred             HHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEecC------chh----
Confidence            3556778889999888855 6666666666543399999999987777653    34322  22211      111    


Q ss_pred             hcCCCccEEEEcCCC---HHHHHHHHHHhccCCceEEEEc
Q 018022          268 MTDGGADYCFECVGL---ASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       268 ~~~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      ...+.+|+|+.....   ...+..+.+.|+++ |++++..
T Consensus        93 ~~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~~  131 (187)
T PRK08287         93 ELPGKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLTF  131 (187)
T ss_pred             hcCcCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEEE
Confidence            112369999864321   23467889999997 9987753

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.59  E-value=0.56  Score=43.92  Aligned_cols=81  Identities=21%  Similarity=0.271  Sum_probs=47.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc-hHHHH----HHhcCCcEEEcCCCCC-CccHHHHHHhhc-CCC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFEI----GKRFGVTEFVNSKNCG-DKSVSQIIIDMT-DGG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~-~~~~~----~~~~g~~~vv~~~~~~-~~~~~~~i~~~~-~~g  272 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|+++++.. ++.+.    ++..|....+..-+.. .+.+.+.+.+.. -+.
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~   89 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG   89 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence            4678999998 9999999998888999 888887643 23322    2233432222111111 122222222211 247


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        90 iD~li~nAG~   99 (306)
T PRK07792         90 LDIVVNNAGI   99 (306)
T ss_pred             CCEEEECCCC
Confidence            9999999885

>PRK06436 glycerate dehydrogenase; Provisional

Probab=93.54  E-value=0.41  Score=44.96  Aligned_cols=34  Identities=29%  Similarity=0.331  Sum_probs=31.5

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      .|.+|.|+|.|.+|...+++++..|. +|++.+++
T Consensus       121 ~gktvgIiG~G~IG~~vA~~l~afG~-~V~~~~r~  154 (303)
T PRK06436        121 YNKSLGILGYGGIGRRVALLAKAFGM-NIYAYTRS  154 (303)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCC
Confidence            57899999999999999999999999 99999875

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=93.49  E-value=0.48  Score=43.00  Aligned_cols=80  Identities=16%  Similarity=0.145  Sum_probs=48.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcC-CchHHHHH-Hh----cCCc-EEEcCCCCCCccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIG-KR----FGVT-EFVNSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~-~~~~~~~~-~~----~g~~-~vv~~~~~~~~~~~~~i~~~~~--  270 (362)
                      ++.++||+|+ +++|.+.+..+...|+ +|+.+.+ +.++.+.+ ++    .+.. ..+..+-.+.+++.+.+.++..  
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF   85 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            4689999998 9999999999999999 7777654 44444322 21    2322 2222211112333333433322  


Q ss_pred             CCccEEEEcCC
Q 018022          271 GGADYCFECVG  281 (362)
Q Consensus       271 ~g~d~vid~~g  281 (362)
                      +.+|++|.+.|
T Consensus        86 g~id~lv~nAg   96 (260)
T PRK08416         86 DRVDFFISNAI   96 (260)
T ss_pred             CCccEEEECcc
Confidence            36899999885

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=93.49  E-value=0.76  Score=42.98  Aligned_cols=72  Identities=22%  Similarity=0.296  Sum_probs=51.6

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCH
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  283 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~  283 (362)
                      +|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|....        .+..+.+.     ..|+||-|+...
T Consensus         3 ~Ig~IGlG~mG~~mA~~l~~~G~-~V~v~d~~~~~~~~~~~~g~~~~--------~s~~~~~~-----~aDvVi~~vp~~   68 (296)
T PRK15461          3 AIAFIGLGQMGSPMASNLLKQGH-QLQVFDVNPQAVDALVDKGATPA--------ASPAQAAA-----GAEFVITMLPNG   68 (296)
T ss_pred             eEEEEeeCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHcCCccc--------CCHHHHHh-----cCCEEEEecCCH
Confidence            68899999999988888888898 99999999999888877664311        12222221     367888888776


Q ss_pred             HHHHHH
Q 018022          284 SLVQEA  289 (362)
Q Consensus       284 ~~~~~~  289 (362)
                      ..++..
T Consensus        69 ~~~~~v   74 (296)
T PRK15461         69 DLVRSV   74 (296)
T ss_pred             HHHHHH
Confidence            534433

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=93.43  E-value=0.67  Score=41.59  Aligned_cols=93  Identities=22%  Similarity=0.276  Sum_probs=61.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcEEEcCCCCCCccHHHHHHhhcCCCccE
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTDGGADY  275 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~  275 (362)
                      -+|.+||=+|+|+ |+++.-+| .+|+ .|+++|-+++-++.++.    -|..  +++..    ..++.+.+.. +.||+
T Consensus        58 l~g~~vLDvGCGg-G~Lse~mA-r~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~----~~~edl~~~~-~~FDv  127 (243)
T COG2227          58 LPGLRVLDVGCGG-GILSEPLA-RLGA-SVTGIDASEKPIEVAKLHALESGVN--IDYRQ----ATVEDLASAG-GQFDV  127 (243)
T ss_pred             CCCCeEEEecCCc-cHhhHHHH-HCCC-eeEEecCChHHHHHHHHhhhhcccc--ccchh----hhHHHHHhcC-CCccE
Confidence            4788999999854 55554544 4567 99999999998888874    2322  44543    2334443321 48999


Q ss_pred             EEE-----cCCCH-HHHHHHHHHhccCCceEEEE
Q 018022          276 CFE-----CVGLA-SLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       276 vid-----~~g~~-~~~~~~~~~l~~~~G~iv~~  303 (362)
                      |++     -+..+ ..+..+.+.++|+ |.+.+-
T Consensus       128 V~cmEVlEHv~dp~~~~~~c~~lvkP~-G~lf~S  160 (243)
T COG2227         128 VTCMEVLEHVPDPESFLRACAKLVKPG-GILFLS  160 (243)
T ss_pred             EEEhhHHHccCCHHHHHHHHHHHcCCC-cEEEEe
Confidence            987     44444 3467889999997 776654

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=93.40  E-value=0.56  Score=44.08  Aligned_cols=38  Identities=18%  Similarity=0.053  Sum_probs=31.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHH
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKF  239 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~  239 (362)
                      .|.+|||+|+ |.+|...+..+...|+ +|+++.++.++.
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~   42 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDR   42 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcch
Confidence            4679999998 9999999998888999 888877766543

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.39  E-value=0.77  Score=42.90  Aligned_cols=94  Identities=19%  Similarity=0.249  Sum_probs=67.2

Q ss_pred             ccccchhhhHHHHHHhcCC-CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCC
Q 018022          181 LLSCGVSTGVGAAWRTANV-EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGD  258 (362)
Q Consensus       181 ~~~~~~~ta~~~l~~~~~~-~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~  258 (362)
                      .+||+....+. +.+..++ -.|.+|.|+|. +.+|.-.+.++...|+ +|++..+...                     
T Consensus       138 ~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~---------------------  194 (301)
T PRK14194        138 LTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST---------------------  194 (301)
T ss_pred             CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC---------------------
Confidence            45555443333 4455555 36899999998 5899999999999999 8888854321                     


Q ss_pred             ccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022          259 KSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       259 ~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                       ++.+.++     ..|+||-++|.+..+...+  ++++ ..++.+|..
T Consensus       195 -~l~e~~~-----~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin  233 (301)
T PRK14194        195 -DAKALCR-----QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGIN  233 (301)
T ss_pred             -CHHHHHh-----cCCEEEEecCChhcccHhh--ccCC-cEEEEeccc
Confidence             2233332     3899999999998777665  8887 888899854

>TIGR02415 23BDH acetoin reductases

Probab=93.38  E-value=0.52  Score=42.40  Aligned_cols=76  Identities=20%  Similarity=0.211  Sum_probs=48.9

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCc-EEE--cCCCCCCccHHHHHHhhcC--CCc
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~-~vv--~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      +++|+|+ |.+|...++.+...|+ +|+.+++++++.+.+    ++.+.. ..+  |-.+  ++.+.+.+.+...  +.+
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         2 VALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD--KDQVFSAIDQAAEKFGGF   78 (254)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcCCC
Confidence            6899998 9999999999889999 899998887655433    223322 122  2222  1333333333321  268


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        79 d~vi~~ag~   87 (254)
T TIGR02415        79 DVMVNNAGV   87 (254)
T ss_pred             CEEEECCCc
Confidence            999999875

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06932 glycerate dehydrogenase; Provisional

Probab=93.36  E-value=0.47  Score=44.81  Aligned_cols=34  Identities=29%  Similarity=0.467  Sum_probs=31.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      .|.+|.|+|.|.+|...+++++..|. +|++.++.
T Consensus       146 ~gktvgIiG~G~IG~~va~~l~~fg~-~V~~~~~~  179 (314)
T PRK06932        146 RGSTLGVFGKGCLGTEVGRLAQALGM-KVLYAEHK  179 (314)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCC
Confidence            47899999999999999999999999 89998764

>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2

Probab=93.34  E-value=0.46  Score=43.20  Aligned_cols=98  Identities=13%  Similarity=0.119  Sum_probs=64.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc-CC---------cEEEcCCCCCCccHHHHHHhhc
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GV---------TEFVNSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-g~---------~~vv~~~~~~~~~~~~~i~~~~  269 (362)
                      +...+|||+|.|. |..+-.+++....++|.+++.+++-.+.++++ +.         -+++.      .|-...+++..
T Consensus        75 ~~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~------~Dg~~~l~~~~  147 (246)
T PF01564_consen   75 PNPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIII------GDGRKFLKETQ  147 (246)
T ss_dssp             SST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEE------STHHHHHHTSS
T ss_pred             CCcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEE------hhhHHHHHhcc
Confidence            4689999998655 55566777777677999999999988888773 21         12333      23455555543


Q ss_pred             CCCccEEEE-cCC---------CHHHHHHHHHHhccCCceEEEEcc
Q 018022          270 DGGADYCFE-CVG---------LASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       270 ~~g~d~vid-~~g---------~~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ...+|+||- ...         +...++.+.+.|+++ |.++.-..
T Consensus       148 ~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~-Gv~v~~~~  192 (246)
T PF01564_consen  148 EEKYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPD-GVLVLQAG  192 (246)
T ss_dssp             ST-EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCcccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCC-cEEEEEcc
Confidence            327999984 333         236688899999998 99887653

5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	362
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		8e-88
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		3e-85
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		2e-68
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		2e-68
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		2e-68
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		2e-67
1cdo_A	374	Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co		1e-64
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		1e-61
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		2e-61
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		2e-61
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		2e-61
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		3e-61
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		3e-61
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		3e-61
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		3e-61
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		3e-61
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		4e-61
1axg_A	374	Crystal Structure Of The Val203->ala Mutant Of Live		5e-61
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		6e-61
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		8e-61
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		2e-60
1a71_A	374	Ternary Complex Of An Active Site Double Mutant Of		2e-60
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		3e-59
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		1e-58
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		4e-58
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		2e-57
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		3e-57
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		2e-56
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		3e-56
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		4e-56
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		4e-55
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		2e-29
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		1e-14
4ej6_A	370	Crystal Structure Of A Putative Zinc-Binding Dehydr		3e-12
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		2e-10
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		4e-10
1vj0_A	380	Crystal Structure Of Alcohol Dehydrogenase (Tm0436)		5e-10
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		2e-09
1ykf_A	352	Nadp-Dependent Alcohol Dehydrogenase From Thermoana		2e-09
2nvb_A	352	Contribution Of Pro275 To The Thermostability Of Th		2e-09
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		3e-09
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		4e-09
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		4e-09
3ftn_A	352	Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDRO		5e-09
3fsr_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		7e-09
1jqb_A	351	Alcohol Dehydrogenase From Clostridium Beijerinckii		1e-08
3fpl_A	351	Chimera Of Alcohol Dehydrogenase By Exchange Of The		1e-08
2b83_A	351	A Single Amino Acid Substitution In The Clostridium		2e-08
1ped_A	351	Bacterial Secondary Alcohol Dehydrogenase (Apo-Form		3e-08
1y9a_A	360	Alcohol Dehydrogenase From Entamoeba Histolotica In		3e-08
2oui_A	360	D275p Mutant Of Alcohol Dehydrogenase From Protozoa		4e-08
1h2b_A	359	Crystal Structure Of The Alcohol Dehydrogenase From		6e-07
3qe3_A	355	Sheep Liver Sorbitol Dehydrogenase Length = 355		7e-07
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		7e-07
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		7e-07
1e3j_A	352	Ketose Reductase (Sorbitol Dehydrogenase) From Silv		1e-06
3fpc_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		1e-06
4a2c_A	346	Crystal Structure Of Galactitol-1-Phosphate Dehydro		1e-06
4eez_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		2e-06
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		2e-06
4eex_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		5e-06
4ilk_A	359	Crystal Structure Of Short Chain Alcohol Dehydrogen		1e-05
3gfb_A	350	L-Threonine Dehydrogenase (Tktdh) From The Hyperthe		3e-05
1pl7_A	356	Human Sorbitol Dehydrogenase (Apo) Length = 356		3e-05
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		1e-04
1pl6_A	356	Human SdhNADHINHIBITOR COMPLEX Length = 356		2e-04

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score =  320 bits (820), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 160/345 (46%), Positives = 228/345 (66%), Gaps = 10/345 (2%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           T G+ I C+AA+A  P +PLVI++V V PP + EVR++I+ T+LCH+D   W  KD   +
Sbjct: 2   TQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGL 61
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLC----SAFPF 125
           FP ILGHEA                    IP + A+C EC  C+S K NLC    SA   
Sbjct: 62  FPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGV 121
Query: 126 KISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
            I   M  D+ SRF  + G+ I+HF+  S+FS+YTV+    V K+DPT P ++ CLL CG
Sbjct: 122 GI---MMNDRKSRF-SVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCG 177
Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245
           V TG+GA W TA VE GS V IFGLG++GLAVAEGA+  GA+RIIG+D+ S+K+E  K+F
Sbjct: 178 VPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF 237
Query: 246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
           GV EFVN K+  DK + ++I+D+TDGG DY FEC+G  S+++ A  CC KGWG ++++GV
Sbjct: 238 GVNEFVNPKD-HDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 296
Query: 306 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
              G ++S   F+++ +G++  G+ FGG K+++ +P L+++YM+K
Sbjct: 297 AASGQEISTRPFQLV-TGRVWKGTAFGGFKSRTQVPWLVEKYMNK 340

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score =  311 bits (798), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 154/345 (44%), Positives = 222/345 (64%), Gaps = 4/345 (1%)
Query: 7   SNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF 66
           S+ T G+ I C+AA+A  P +PLVI++V V PP + EVRV+++ T+LCH+D   W  KD 
Sbjct: 17  SSATQGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTWSGKDP 76
Query: 67  PAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFK 126
             +FP +LGHEA                    IP + A+C EC  C+S K NLC      
Sbjct: 77  EGLFPCVLGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAA 136
Query: 127 ISPW-MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
                M  D+ SRF  + G+ I+HF+  S+FS+YTV+    V K+DP  P  + CLL CG
Sbjct: 137 TGVGVMMNDRKSRFS-INGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCG 195
Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245
           V TG+GA W TA VE GS V +FGLG++GLAVAEGA+  GA+RIIG+D+ S+KF+  K F
Sbjct: 196 VPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNF 255
Query: 246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
           GVTEF+N K   ++ + Q+I+D+TDGG DY FEC+G  S+++ A  CC KGWG ++++GV
Sbjct: 256 GVTEFINPKE-HEQPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGV 314
Query: 306 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
              G ++S   F+++ +G++  G+ FGG K++S +P L+ +Y+ K
Sbjct: 315 AASGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPSLVDKYLKK 358

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score =  256 bits (653), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 139/341 (40%), Positives = 202/341 (59%), Gaps = 3/341 (0%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           +A + I+C+AA+A   G+PL I+E+ V PP +HEVR++II T++CH+D       D    
Sbjct: 1   SANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGC 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FP ILGHE                     IP ++  C EC  C + K NLC         
Sbjct: 61  FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
            +  D TSRF   +G+TI H++  S+FSEYTV+    V K+DP  P ++ CLL CG+STG
Sbjct: 121 GLMPDGTSRF-TCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            GAA  TA +E GS   +FGLG +GLAV  G ++ GA+RIIGVD+  +KF   K FG TE
Sbjct: 180 YGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            +N ++   K + +++I+MTDGG DY FEC+G   +++ A   C KGWG ++V+GV   G
Sbjct: 240 CINPQDF-SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASG 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
            +++   F+++ +G+   G+ FGG K+   +P L+  YM K
Sbjct: 299 EEIATRPFQLV-TGRTWKGTAFGGWKSVESVPKLVSEYMSK 338

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score =  255 bits (652), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 139/340 (40%), Positives = 201/340 (59%), Gaps = 3/340 (0%)
Query: 11  AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF 70
           A + I+C+AA+A   G+PL I+E+ V PP +HEVR++II T++CH+D       D    F
Sbjct: 2   ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 61
Query: 71  PRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
           P ILGHE                     IP ++  C EC  C + K NLC          
Sbjct: 62  PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 121
Query: 131 MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGV 190
           +  D TSRF   +G+TI H++  S+FSEYTV+    V K+DP  P ++ CLL CG+STG 
Sbjct: 122 LMPDGTSRF-TCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY 180
Query: 191 GAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250
           GAA  TA +E GS   +FGLG +GLAV  G ++ GA+RIIGVD+  +KF   K FG TE 
Sbjct: 181 GAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATEC 240
Query: 251 VNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS 310
           +N ++   K + +++I+MTDGG DY FEC+G   +++ A   C KGWG ++V+GV   G 
Sbjct: 241 INPQDF-SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGE 299
Query: 311 QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
           +++   F+++ +G+   G+ FGG K+   +P L+  YM K
Sbjct: 300 EIATRPFQLV-TGRTWKGTAFGGWKSVESVPKLVSEYMSK 338

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score =  255 bits (652), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 139/340 (40%), Positives = 201/340 (59%), Gaps = 3/340 (0%)
Query: 11  AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF 70
           A + I+C+AA+A   G+PL I+E+ V PP +HEVR++II T++CH+D       D    F
Sbjct: 1   ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 60
Query: 71  PRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
           P ILGHE                     IP ++  C EC  C + K NLC          
Sbjct: 61  PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120
Query: 131 MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGV 190
           +  D TSRF   +G+TI H++  S+FSEYTV+    V K+DP  P ++ CLL CG+STG 
Sbjct: 121 LMPDGTSRF-TCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY 179
Query: 191 GAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250
           GAA  TA +E GS   +FGLG +GLAV  G ++ GA+RIIGVD+  +KF   K FG TE 
Sbjct: 180 GAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATEC 239
Query: 251 VNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS 310
           +N ++   K + +++I+MTDGG DY FEC+G   +++ A   C KGWG ++V+GV   G 
Sbjct: 240 INPQDF-SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGE 298
Query: 311 QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
           +++   F+++ +G+   G+ FGG K+   +P L+  YM K
Sbjct: 299 EIATRPFQLV-TGRTWKGTAFGGWKSVESVPKLVSEYMSK 337

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score =  253 bits (645), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 138/340 (40%), Positives = 200/340 (58%), Gaps = 3/340 (0%)
Query: 11  AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF 70
           A + I+C+AA+A   G+PL I+E+ V PP +HEVR++II T++CH+D       D    F
Sbjct: 1   ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 60
Query: 71  PRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
           P ILGH                      IP ++  C EC  C + K NLC          
Sbjct: 61  PVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120
Query: 131 MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGV 190
           +  D TSRF   +G+TI H++  S+FSEYTV+    V K+DP  P ++ CLL CG+STG 
Sbjct: 121 LMPDGTSRF-TCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY 179
Query: 191 GAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250
           GAA  TA +E GS   +FGLG +GLAV  G ++ GA+RIIGVD+  +KF   K FG TE 
Sbjct: 180 GAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATEC 239
Query: 251 VNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS 310
           +N ++   K + +++I+MTDGG DY FEC+G   +++ A   C KGWG ++V+GV   G 
Sbjct: 240 INPQDF-SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGE 298
Query: 311 QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
           +++   F+++ +G+   G+ FGG K+   +P L+  YM K
Sbjct: 299 EIATRPFQLV-TGRTWKGTAFGGWKSVESVPKLVSEYMSK 337

>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374

Iteration: 1
 Score =  243 bits (620), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 134/341 (39%), Positives = 197/341 (57%), Gaps = 4/341 (1%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           T GK I+C+AA+A    +PLVI+E+ VD P+++E+R++II T +CH+D+           
Sbjct: 2   TVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDG 61
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FP +LGHE                     IP F++ C EC  C+S K N C       SP
Sbjct: 62  FPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESP 121
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
            +   + +RF   +G  +  F+  S+FS+YTV++   V K+DP+ P +  CLL CGVSTG
Sbjct: 122 DVMSPKETRFT-CKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTG 180
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            GAA  TA VE GST  +FGLG++GLA   G    GA RII VD+  +KFE  K FG T+
Sbjct: 181 FGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATD 240
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
           FVN  N   + +SQ++  MT+GG D+  ECVG   +++ A   C KGWG ++++G     
Sbjct: 241 FVNP-NDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDL- 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             ++    +++ +G+   GS+FGG K K  +P ++K Y+DK
Sbjct: 299 HDVATRPIQLI-AGRTWKGSMFGGFKGKDGVPKMVKAYLDK 338

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score =  233 bits (594), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/348 (38%), Positives = 190/348 (54%), Gaps = 7/348 (2%)
Query: 7   SNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF 66
           S  T GK I+C+AAIA   G+PL I+EV V PP +HEVR++II TSLCH+D T    K  
Sbjct: 1   SMGTKGKVIKCKAAIAWEAGKPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFE 60
Query: 67  PAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFK 126
              FP I+GHEA                    IP +   C +C  C S   NLC      
Sbjct: 61  GLAFPVIVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNL 120
Query: 127 ISP----WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLL 182
            SP     +  D+TSRF   +G+ ++HF   S+FS+YTV+   ++ K+D      R CLL
Sbjct: 121 KSPASDQQLMEDKTSRFT-CKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLL 179
Query: 183 SCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242
            CG STG GAA   A V  GST  +FGLG +GL+   G +  GA+RIIG+D+ SEKF   
Sbjct: 180 GCGFSTGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKA 239
Query: 243 KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV 302
           K  G T+ +N ++   K + ++II++T GG D+  +C G +  ++ A  C   GWG    
Sbjct: 240 KALGATDCLNPRDL-HKPIQEVIIELTKGGVDFALDCAGGSETMKAALDCTTAGWGSCTF 298
Query: 303 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
           +GV      L++   E++  G+ + G+ FGG K+   IP L+  Y +K
Sbjct: 299 IGVAAGSKGLTVFPEELI-IGRTINGTFFGGWKSVDSIPKLVTDYKNK 345

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score =  233 bits (593), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 127/341 (37%), Positives = 189/341 (55%), Gaps = 4/341 (1%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD            
Sbjct: 2   TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA                    IP F   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+  +KF   K  G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G ++++GV    
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             LS++   +L SG+   G++FGG K+K  +P L+  +M K
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score =  232 bits (592), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 128/341 (37%), Positives = 193/341 (56%), Gaps = 5/341 (1%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+E+ V PP + EVR++I+ T +C +D    K     + 
Sbjct: 2   TAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIK-GTMVSK 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FP I+GHEA                    IP FL  C EC  CR+  GNLC         
Sbjct: 61  FPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDI-TGR 119
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
            +  D T+RF   +G+ +HHF++ S+F+EYTV+D + V K+D   PP + CL+ CG STG
Sbjct: 120 GVLADGTTRFT-CKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTG 178
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            GAA +T  V+ GST V+FGLG +GL+V  G +  GA+RIIG+D+  +KFE     G TE
Sbjct: 179 YGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATE 238
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            ++ K+   K +S+++ +MT     Y FE +G    + +A A C   +G ++V+GV    
Sbjct: 239 CISPKD-STKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSA 297
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             L+     +L +G+   G +FGGLK++ D+P L+  ++ K
Sbjct: 298 KMLTYDPM-LLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 337

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score =  232 bits (592), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 128/341 (37%), Positives = 193/341 (56%), Gaps = 5/341 (1%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+E+ V PP + EVR++I+ T +C +D    K     + 
Sbjct: 2   TAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIK-GTMVSK 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FP I+GHEA                    IP FL  C EC  CR+  GNLC         
Sbjct: 61  FPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDI-TGR 119
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
            +  D T+RF   +G+ +HHF++ S+F+EYTV+D + V K+D   PP + CL+ CG STG
Sbjct: 120 GVLADGTTRFT-CKGKPVHHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTG 178
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            GAA +T  V+ GST V+FGLG +GL+V  G +  GA+RIIG+D+  +KFE     G TE
Sbjct: 179 YGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATE 238
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            ++ K+   K +S+++ +MT     Y FE +G    + +A A C   +G ++V+GV    
Sbjct: 239 CISPKD-STKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSA 297
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             L+     +L +G+   G +FGGLK++ D+P L+  ++ K
Sbjct: 298 KMLTYDPM-LLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 337

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  232 bits (591), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 131/345 (37%), Positives = 193/345 (55%), Gaps = 13/345 (3%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++   +C SD          A 
Sbjct: 2   TAGKVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSD-DHVVSGTLVAP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA                    IP F+  C +C  C+  +GNLC       + 
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLK-----NL 115
Query: 130 WMPR----DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
            MPR    D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG
Sbjct: 116 SMPRGTMQDGTSRF-TCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCG 174
Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245
            STG G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+  +KF   K  
Sbjct: 175 FSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV 234
Query: 246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
           G TE VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G ++++GV
Sbjct: 235 GATECVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGV 293
Query: 306 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
                 LS++   +L SG+   G++FGG K+K  +P L+  +M K
Sbjct: 294 PPDSQNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 337

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score =  232 bits (591), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 127/341 (37%), Positives = 188/341 (55%), Gaps = 4/341 (1%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD            
Sbjct: 2   TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA                    IP F   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+  +KF   K  G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G +++ GV    
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVITGVPPDS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             LS++   +L SG+   G++FGG K+K  +P L+  +M K
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  232 bits (591), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 131/345 (37%), Positives = 193/345 (55%), Gaps = 13/345 (3%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++   +C SD          A 
Sbjct: 2   TAGKVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSD-DHVVSGTLVAP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA                    IP F+  C +C  C+  +GNLC       + 
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLK-----NL 115
Query: 130 WMPR----DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
            MPR    D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG
Sbjct: 116 SMPRGTMQDGTSRF-TCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCG 174
Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245
            STG G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+  +KF   K  
Sbjct: 175 FSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV 234
Query: 246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
           G TE VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G ++++GV
Sbjct: 235 GATECVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGV 293
Query: 306 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
                 LS++   +L SG+   G++FGG K+K  +P L+  +M K
Sbjct: 294 PPDSQNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 337

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  232 bits (591), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 126/341 (36%), Positives = 189/341 (55%), Gaps = 4/341 (1%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD            
Sbjct: 2   TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVS-GTLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA                    IP F   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+  ++F   K  G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G ++++GV    
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             LS++   +L SG+   G++FGG K+K  +P L+  +M K
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  231 bits (590), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 127/341 (37%), Positives = 188/341 (55%), Gaps = 4/341 (1%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD            
Sbjct: 2   TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA                    IP F   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+  +KF   K  G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G ++++GV    
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             LS++   +L SG+   G +FGG K+K  +P L+  +M K
Sbjct: 299 QNLSMNPM-LLLSGRTWKGCIFGGFKSKDSVPKLVADFMAK 338

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score =  231 bits (589), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 127/341 (37%), Positives = 188/341 (55%), Gaps = 4/341 (1%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD            
Sbjct: 2   TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA                    IP F   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+  +KF   K  G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G +++ GV    
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVISGVPPDS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             LS++   +L SG+   G++FGG K+K  +P L+  +M K
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374

Iteration: 1
 Score =  231 bits (589), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 127/341 (37%), Positives = 188/341 (55%), Gaps = 4/341 (1%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD            
Sbjct: 2   TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA                    IP F   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            G+A + A V  GST  +FGLG  GL+V  G +  GA RIIGVD+  +KF   K  G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G ++++GV    
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             LS++   +L SG+   G++FGG K+K  +P L+  +M K
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score =  231 bits (588), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 126/341 (36%), Positives = 188/341 (55%), Gaps = 4/341 (1%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD            
Sbjct: 2   TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA                    IP F   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+  +KF   K  G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G ++++ V    
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVAVTPDS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             LS++   +L SG+   G++FGG K+K  +P L+  +M K
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score =  230 bits (587), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 126/341 (36%), Positives = 189/341 (55%), Gaps = 4/341 (1%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD            
Sbjct: 2   TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA                    IP +   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+  +KF   K  G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G ++++GV    
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             LS++   +L SG+   G++FGG K+K  +P L+  +M K
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score =  229 bits (585), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 126/341 (36%), Positives = 188/341 (55%), Gaps = 4/341 (1%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD            
Sbjct: 2   TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA                    IP     C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+  +KF   K  G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G ++++GV    
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             LS++   +L SG+   G++FGG K+K  +P L+  +M K
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374

Iteration: 1
 Score =  229 bits (583), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 126/341 (36%), Positives = 188/341 (55%), Gaps = 4/341 (1%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD            
Sbjct: 2   TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA                    IP +   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            G+A + A V  GST  +FGLG  GL+V  G +  GA RIIGVD+  +KF   K  G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G ++++GV    
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             LS++   +L SG+   G++FGG K+K  +P L+  +M K
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  225 bits (574), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 132/345 (38%), Positives = 190/345 (55%), Gaps = 10/345 (2%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           T GK I+C+AAIA   G PL I+E+ V PP + EVR+++I T +CH+D+     K   A+
Sbjct: 2   TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCHTDINATDPKK-KAL 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAF-PFK-- 126
           FP +LGHE                     IP F   C  C  C S   NLC     FK  
Sbjct: 61  FPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYP 120
Query: 127 -ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
            I   +  D+TSRF   +G +I+HF+ VSSFS+YTV+  A++ +VD      R CL+ CG
Sbjct: 121 TIDQELMEDRTSRFT-CKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCG 179
Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245
            S+G GAA  TA V  GST  +FGLG +GL+   G ++ GA+RII +D+  EKF   K  
Sbjct: 180 FSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL 239
Query: 246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
           G T+ +N +   DK V  +I ++T GG DY  +C G A  ++ A  C   GWG   V+G 
Sbjct: 240 GATDCLNPREL-DKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGA 298
Query: 306 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
                ++++ + +V+  G+ + G+ FGG K+   +P L+  Y +K
Sbjct: 299 KV--DEMTIPTVDVIL-GRSINGTFFGGWKSVDSVPNLVSDYKNK 340

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score =  223 bits (569), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 124/341 (36%), Positives = 184/341 (53%), Gaps = 4/341 (1%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++   +C SD       +    
Sbjct: 2   TAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVS-GNLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P ILGHEA                    IP F   C +C  C++ + N C         
Sbjct: 61  LPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D T RF    G+ IHHFV VS+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTLQDGTRRF-TCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            G+A + A V  GST  +FGLG +GL+V  G +  GA RII VD+  +KF   K  G TE
Sbjct: 180 YGSAVKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            +N ++   K + +++ +MTDGG D+ FE +G    +  +  CC +  G ++++GV    
Sbjct: 240 CINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             LS++   +L +G+   G++FGG K+K  +P L+  +M K
Sbjct: 299 QNLSINPM-LLLTGRTWKGAIFGGFKSKESVPKLVADFMAK 338

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  221 bits (564), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 131/345 (37%), Positives = 189/345 (54%), Gaps = 10/345 (2%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           T GK I+C+AAIA   G PL I+E+ V PP + EVR+++I T +C +D+     K   A+
Sbjct: 2   TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKK-KAL 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAF-PFK-- 126
           FP +LGHE                     IP F   C  C  C S   NLC     FK  
Sbjct: 61  FPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYP 120
Query: 127 -ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
            I   +  D+TSRF   +G +I+HF+ VSSFS+YTV+  A++ +VD      R CL+ CG
Sbjct: 121 TIDQELMEDRTSRFT-CKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCG 179
Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245
            S+G GAA  TA V  GST  +FGLG +GL+   G ++ GA+RII +D+  EKF   K  
Sbjct: 180 FSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL 239
Query: 246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
           G T+ +N +   DK V  +I ++T GG DY  +C G A  ++ A  C   GWG   V+G 
Sbjct: 240 GATDCLNPREL-DKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGA 298
Query: 306 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
                ++++ + +V+  G+ + G+ FGG K+   +P L+  Y +K
Sbjct: 299 KV--DEMTIPTVDVIL-GRSINGTFFGGWKSVDSVPNLVSDYKNK 340

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score =  219 bits (559), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/347 (37%), Positives = 186/347 (53%), Gaps = 6/347 (1%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I C+AA+A  P +PL ++ + V PP +HEVR++I+ + +C SD +  K +  P+ 
Sbjct: 3   TAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLK-EIIPSK 61
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FP ILGHEA+                   IP F+  C  C  C+S   N C         
Sbjct: 62  FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKT 121
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
            +  D TSRF   RG+ I++ +  S+F+EYTV+    V K+DP  P   +CL+ CG +TG
Sbjct: 122 GLMADMTSRF-TCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPL-ESCLIGCGFATG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            GAA  TA V  GST  +FGLG +G +   G +  GA+RIIGV    +KF      G TE
Sbjct: 180 YGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            +N K+  DK + ++I + T+GG DY  EC G    +  A      G G T+VLG+  P 
Sbjct: 240 CLNPKDY-DKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASP- 297
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVPF 356
           ++       +L +G+ L GS+FGG K + ++  L+  YM K   V F
Sbjct: 298 NERLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNF 343

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  218 bits (556), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 120/341 (35%), Positives = 183/341 (53%), Gaps = 4/341 (1%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I++V V PP ++EVR++++   +CH+D       +    
Sbjct: 2   TAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICHTD-DHVVSGNLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P ILGHEA                    IP F   C +C  C++ + N C         
Sbjct: 61  LPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D T RF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTLQDGTRRFT-CRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            G+A   A V  GST  +FGLG +GL+   G +  GA RII VD+  +KF   K  G TE
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            +N ++   K + +++ +MTDGG D+ FE +G    +  +  CC +  G ++++GV    
Sbjct: 240 CINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPAS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             LS++   +L +G+   G+++GG K+K  IP L+  +M K
Sbjct: 299 QNLSINPM-LLLTGRTWKGAVYGGFKSKEGIPKLVADFMAK 338

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  215 bits (548), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 119/341 (34%), Positives = 182/341 (53%), Gaps = 4/341 (1%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I++V V PP ++EVR++++   +C +D       +    
Sbjct: 2   TAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTD-DHVVSGNLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P ILGHEA                    IP F   C +C  C++ + N C         
Sbjct: 61  LPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D T RF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTLQDGTRRFT-CRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            G+A   A V  GST  +FGLG +GL+   G +  GA RII VD+  +KF   K  G TE
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            +N ++   K + +++ +MTDGG D+ FE +G    +  +  CC +  G ++++GV    
Sbjct: 240 CINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPAS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             LS++   +L +G+   G+++GG K+K  IP L+  +M K
Sbjct: 299 QNLSINPM-LLLTGRTWKGAVYGGFKSKEGIPKLVADFMAK 338

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score =  215 bits (548), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 119/341 (34%), Positives = 182/341 (53%), Gaps = 4/341 (1%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I++V V PP ++EVR++++   +C +D       +    
Sbjct: 2   TAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTD-DHVVSGNLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P ILGHEA                    IP F   C +C  C++ + N C         
Sbjct: 61  LPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D T RF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTLQDGTRRFT-CRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            G+A   A V  GST  +FGLG +GL+   G +  GA RII VD+  +KF   K  G TE
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            +N ++   K + +++ +MTDGG D+ FE +G    +  +  CC +  G ++++GV    
Sbjct: 240 CINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPAS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             LS++   +L +G+   G+++GG K+K  IP L+  +M K
Sbjct: 299 QNLSINPM-LLLTGRTWKGAVYGGFKSKEGIPKLVADFMAK 338

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  214 bits (546), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 119/341 (34%), Positives = 182/341 (53%), Gaps = 4/341 (1%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I++V V PP ++EVR++++   +C +D       +    
Sbjct: 2   TAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICGTD-DHVVSGNLVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P ILGHEA                    IP F   C +C  C++ + N C         
Sbjct: 61  LPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D T RF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTLQDGTRRFT-CRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            G+A   A V  GST  +FGLG +GL+   G +  GA RII VD+  +KF   K  G TE
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            +N ++   K + +++ +MTDGG D+ FE +G    +  +  CC +  G ++++GV    
Sbjct: 240 CINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPAS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             LS++   +L +G+   G+++GG K+K  IP L+  +M K
Sbjct: 299 QNLSINPM-LLLTGRTWKGAVYGGFKSKEGIPKLVADFMAK 338

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score =  211 bits (538), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 119/341 (34%), Positives = 181/341 (53%), Gaps = 4/341 (1%)
Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++   +C +D            
Sbjct: 2   TAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVS-GTMVTP 60
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P ILGHEA                    IP  +  C +C  C++ + N C         
Sbjct: 61  LPVILGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNPQ 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D TSRF   R + IHHF+ +S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTLQDGTSRFT-CRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            G+A   A V  GST  +FGLG +GL+   G +  GA RII VD+  +KF   K  G TE
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            +N ++   K + +++ +MTDGG D+ FE +G    +  +  CC +  G ++++GV    
Sbjct: 240 CINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             LS++   +L +G+   G++ GG K+K  +P L+  +M K
Sbjct: 299 QNLSMNPM-LLLTGRTWKGAILGGFKSKECVPKLVADFMAK 338

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 145/332 (43%), Gaps = 7/332 (2%)
Query: 19  AAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEA 78
           AA+    G    +  + +  P   EV V+++ T +CH+D+     K +P   P +LGHE 
Sbjct: 9   AAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQK-YPVPLPAVLGHEG 67
Query: 79  IXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFK-ISPWMPRDQTS 137
                               +  +   C +C  C +     CS F  +  S        +
Sbjct: 68  SGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHA 126
Query: 138 RFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA 197
                +G    HF + SSF+ Y +    + VKV   VP      L CG+ TG GA     
Sbjct: 127 LCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINAL 186
Query: 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG 257
            V   S+ V +G G++GL+    A++CGA+ II VD++  + E+ K+ G T  +NSK   
Sbjct: 187 KVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKT-- 244
Query: 258 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF 317
            +     I ++TDGG ++  E  G   ++++         GK  V+G  Q G+       
Sbjct: 245 -QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGI-LGKIAVVGAPQLGTTAQFDVN 302
Query: 318 EVLHSGKILMGSLFGGLKAKSDIPILLKRYMD 349
           ++L  GK ++G + G    K  IP L++ Y  
Sbjct: 303 DLLLGGKTILGVVEGSGSPKKFIPELVRLYQQ 334

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 128/322 (39%), Gaps = 41/322 (12%)
Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF----WKMKDFPAVFPRI 73
           +AA+  A G+PL IDEV +  P   +++V I  + +CH+D+      W +K  P   P I
Sbjct: 27  KAAVVRAFGKPLTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAEGDWPVKPNP---PFI 83
Query: 74  LGHEAIX-XXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
            GHE +                    IP     C  C  C      LC            
Sbjct: 84  PGHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCE----------- 132
Query: 133 RDQTSRFKDLRGETIHHFVSVS-SFSEYTVLDIAHVVKVDPTVPPNR-ACLLSCGVSTGV 190
                       E ++   SV+  F+EY V D   V  +   +  N  A +L  GV+  V
Sbjct: 133 ------------EQLNTGYSVNGGFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVT--V 178
Query: 191 GAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250
               +  + + G  VVI G+G +G    + AR  G   +  VD+   K ++ +R G T  
Sbjct: 179 YKGLKVTDTKPGDWVVISGIGGLGHMAVQYARAMG-LNVAAVDIDDRKLDLARRLGATVT 237
Query: 251 VNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS 310
           VN+K   D +    I   TDGGA             ++A     +  G T+ L    PG 
Sbjct: 238 VNAKTVADPAA--YIRKETDGGAQGVLVTAVSPKAFEQALGMVAR--GGTVSLNGLPPGD 293
Query: 311 QLSLSSFEVLHSGKILMGSLFG 332
              LS F ++ +G  + GS+ G
Sbjct: 294 -FPLSIFNMVLNGVTVRGSIVG 314

>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 122/301 (40%), Gaps = 42/301 (13%)
Query: 39  PNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE--AIXXXXXXXXXXXXXXXXX 96
           P   ++ V++    +C +D       +FP+  P  LGHE   I                 
Sbjct: 45  PGPDDLLVKVEACGICGTDRHLLH-GEFPSTPPVTLGHEFCGIVVEAGSAVRDIAPGARI 103
Query: 97  XXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSF 156
              P+    C  C  C++ + NLC                   ++LR   IH       F
Sbjct: 104 TGDPNI--SCGRCPQCQAGRVNLC-------------------RNLRAIGIHRD---GGF 139
Query: 157 SEYTVLDIAHVVKVDPTVPPNRACL---LSCGVSTGVGAAWRTANVEVGSTVVIFGLGSI 213
           +EY ++      ++  T+ P        L+C +          + ++ GSTV I G G I
Sbjct: 140 AEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLH-----GVDLSGIKAGSTVAILGGGVI 194
Query: 214 GLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQII---IDMTD 270
           GL   + ARL GAT +I     + K  + +  G T  V+  + GD  V + I   + +  
Sbjct: 195 GLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVD-PSAGD--VVEAIAGPVGLVP 251
Query: 271 GGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL 330
           GG D   EC G+A  V+++    + G G  ++LGV   G ++ +  F++L     ++GS 
Sbjct: 252 GGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQGEKVEIEPFDILFRELRVLGSF 310
Query: 331 F 331
Sbjct: 311 I 311

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 125/329 (37%), Gaps = 44/329 (13%)
Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF----WKMKDFPAVFPRI 73
           +AA+  A G PL IDEV V  P   +V+V+I  + +CH+D+      W +K      P I
Sbjct: 4   KAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVK---PTLPFI 60
Query: 74  LGHEAIXXXXXXXXXXXXXXXX-XXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
            GHE +                    +P   + C  C  C      LC            
Sbjct: 61  PGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCE----------- 109
Query: 133 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV-VKVDPTVPPNRACLLSCGVSTGVG 191
           + Q + +    G           + EY V D  +V +  D       A +L  GV+  V 
Sbjct: 110 KQQNTGYSVNGG-----------YGEYVVADPNYVGLLPDKVGFVEIAPILCAGVT--VY 156
Query: 192 AAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251
              +  +   G  VVI G+G +G    + AR  G  R+  VD+   K  + +R G    V
Sbjct: 157 KGLKVTDTRPGQWVVISGIGGLGHVAVQYARAMG-LRVAAVDIDDAKLNLARRLGAEVAV 215
Query: 252 NSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ 311
           N+++    +  Q  I    GGA              +A    R+  G TI L    PG  
Sbjct: 216 NARDTDPAAWLQKEI----GGAHGVLVTAVSPKAFSQAIGMVRR--GGTIALNGLPPGD- 268
Query: 312 LSLSSFEVLHSGKILMGSLFGGLKAKSDI 340
                F+V+  G  + GS+ G    +SD+
Sbjct: 269 FGTPIFDVVLKGITIRGSIVG---TRSDL 294

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 102/267 (38%), Gaps = 26/267 (9%)
Query: 27  EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKM--KDFPAVFPRILGHEAIXXXXX 84
           EP+V+D +    P   E+ +++    LCHSD+    M    +    P  LGHE +     
Sbjct: 12  EPVVVD-IPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAE 70
Query: 85  XXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRG 144
                           +    C  C  C   + N C+                R  DL G
Sbjct: 71  LGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCT----------------RAADL-G 113
Query: 145 ETIHHFVSVSSFSEYTVLDIA-HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGS 203
            T     S  S +EY ++D A H+V +    P   A L   G++     +     +  GS
Sbjct: 114 ITPPGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGS 173
Query: 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQ 263
           T V+ G+G +G    +  R   A R+I VD+  ++  + +  G    V S        + 
Sbjct: 174 TAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSG----AGAAD 229
Query: 264 IIIDMTDG-GADYCFECVGLASLVQEA 289
            I ++T G GA   F+ VG  S +  A
Sbjct: 230 AIRELTGGQGATAVFDFVGAQSTIDTA 256

>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 80/328 (24%), Positives = 125/328 (38%), Gaps = 27/328 (8%)
Query: 15  IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL 74
           ++  A +     +PLV  E  +       + V I+   +C SDV  ++ +D     P IL
Sbjct: 16  LKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIIL 75
Query: 75  GHEAIXXXXXXXXXXXXXXXXXXXIPHFLA-----DCTECVGCR-SKKGNLCSAFPFKIS 128
           GHE                         +       C EC  C+ SK+  LC   P +  
Sbjct: 76  GHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLC---PNRKV 132
Query: 129 PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLD-IAHVVKVDPTVPPNRACLLSCGVS 187
             + R   S +  LRG           +S + VLD    V+KV      +   +  C  +
Sbjct: 133 YGINRG-CSEYPHLRG----------CYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGA 181
Query: 188 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247
           T   A         G TVVI G G +GL     AR  GA  +I +     + ++ +  G 
Sbjct: 182 TAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGA 241
Query: 248 TEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306
              +N +    +   + I+D+T G GAD+  E  G +  + E     R+G G   V GV 
Sbjct: 242 DLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVA 300
Query: 307 QPGSQLSLSSFEVLHSGKILMGSLFGGL 334
            P   +    +E L    +L  + F G+
Sbjct: 301 VPQDPVPFKVYEWL----VLKNATFKGI 324

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 81/323 (25%), Positives = 125/323 (38%), Gaps = 37/323 (11%)
Query: 14  PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV--FP 71
           P   +AA+  A G PL I+EV V  P   +V V+I  + +CH+D+   +  D+P     P
Sbjct: 4   PQTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAE-GDWPVKPPLP 62
Query: 72  RILGHEAIXXXXXXXXXXXXXXXX-XXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
            I GHE +                    IP     C  C  C +    LC +        
Sbjct: 63  FIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCES-------- 114
Query: 131 MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP-PNRACLLSCGVSTG 189
               Q +    + G           ++EY + D  +V  +   V     A +L  GV+  
Sbjct: 115 ----QQNTGYSVNG----------GYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVY 160
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            G   +  N   G  V I G+G +G    + AR  G   +  +D+   K E+ ++ G + 
Sbjct: 161 KG--LKQTNARPGQWVAISGIGGLGHVAVQYARAMG-LHVAAIDIDDAKLELARKLGASL 217
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            VN++   +  V  I  D+  GGA          S   +A    R+  G TI L V  P 
Sbjct: 218 TVNARQ--EDPVEAIQRDI--GGAHGVLVTAVSNSAFGQAIGMARR--GGTIAL-VGLPP 270
Query: 310 SQLSLSSFEVLHSGKILMGSLFG 332
                  F+V+  G  + GS+ G
Sbjct: 271 GDFPTPIFDVVLKGLHIAGSIVG 293

>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium Brockii Length = 352

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 12/160 (7%)
Query: 138 RFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA 197
           +F +++      F  V+       +++AH+ K    +P   A ++   ++TG   A   A
Sbjct: 111 KFSNVKDGVFGEFFHVNDAD----MNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELA 162
Query: 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG 257
           ++E+G+TV + G+G +GL    GA+L GA RII V       +  K +G T+ VN K   
Sbjct: 163 DIELGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVNYK--- 219
Query: 258 DKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKG 296
           D  +   I+++T+G G D      G A ++  A    + G
Sbjct: 220 DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG 259

>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The Alcohol Dehydrogenases (Adhs) Length = 352

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 12/160 (7%)
Query: 138 RFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA 197
           +F +++      F  V+       +++AH+ K    +P   A ++   ++TG   A   A
Sbjct: 111 KFSNVKDGVFGEFFHVNDAD----MNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELA 162
Query: 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG 257
           ++E+G+TV + G+G +GL    GA+L GA RII V       +  K +G T+ VN K   
Sbjct: 163 DIELGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVNYK--- 219
Query: 258 DKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKG 296
           D  +   I+++T+G G D      G A ++  A    + G
Sbjct: 220 DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG 259

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 124/322 (38%), Gaps = 37/322 (11%)
Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPA--VFPRILG 75
           +AA+     EPL I EV     +  EV VRI    +CH+D+      D+P     P I G
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDL-HAAHGDWPVKPKLPLIPG 60
Query: 76  HEAIXXXXXXX-XXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           HE +                    IP   + C  C  C S +  LC              
Sbjct: 61  HEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLC------------EH 108
Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVSTGVGAA 193
           Q +    + G           ++EY      +VVK+   +    A  + C GV+T    A
Sbjct: 109 QKNAGYSVDG----------GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTT--YKA 156
Query: 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253
            +    + G  V I+G+G +G    + A+  G   ++ VD+  EK E+ K  G    VN 
Sbjct: 157 LKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMG-LNVVAVDIGDEKLELAKELGADLVVNP 215
Query: 254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLS 313
                K  +   +    GG              Q AY   R+G G  +++G+  P  ++ 
Sbjct: 216 L----KEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGL--PPEEMP 268
Query: 314 LSSFEVLHSGKILMGSLFGGLK 335
           +  F+ + +G  ++GS+ G  K
Sbjct: 269 IPIFDTVLNGIKIIGSIVGTRK 290

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 80/335 (23%), Positives = 135/335 (40%), Gaps = 42/335 (12%)
Query: 15  IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF--PR 72
           ++ +AA+     EPL I++V +  P   EV +RI    +C +D+  WK  +    F  P 
Sbjct: 2   VKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPI 61
Query: 73  ILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
           ILGHE                     +     D T C  CR  K N+C     +I P   
Sbjct: 62  ILGHENAGTIVEVGELAKVKKGDNVVVYATWGDLT-CRYCREGKFNICKN---QIIP--- 114
Query: 133 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH-VVKVDPTVPPNRACLLSCGVSTGVG 191
                      G+T +       FSEY ++  +  +VK++   P   A L   G +T +G
Sbjct: 115 -----------GQTTN-----GGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAG-TTSMG 157
Query: 192 AAWRTANVEVGS----TVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIGKRFG 246
           A  R A   +       V++ G+G + +   +  + L     I+G+    +  +     G
Sbjct: 158 AI-RQALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELG 216
Query: 247 VTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
             ++V+      K    +I  +TDG GA    + VG     +  Y   +    +  ++ V
Sbjct: 217 -ADYVSEM----KDAESLINKLTDGLGASIAIDLVGTE---ETTYNLGKLLAQEGAIILV 268
Query: 306 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDI 340
              G ++SL +F+     K L+GS +G L    D+
Sbjct: 269 GMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDV 303

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 123/322 (38%), Gaps = 37/322 (11%)
Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPA--VFPRILG 75
           +AA+     EPL I EV     +  EV VRI    +CH+D+      D+P     P I G
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDL-HAAHGDWPVKPKLPLIPG 60
Query: 76  HEAIXXXXXXX-XXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           HE +                    IP   + C  C  C S +  LC              
Sbjct: 61  HEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLC------------EH 108
Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVSTGVGAA 193
           Q +    + G           ++EY      +VVK+   +    A  + C GV+T    A
Sbjct: 109 QKNAGYSVDG----------GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTT--YKA 156
Query: 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253
            +    + G  V I+G+G  G    + A+  G   ++ VD+  EK E+ K  G    VN 
Sbjct: 157 LKVTGAKPGEWVAIYGIGGFGHVAVQYAKAMG-LNVVAVDIGDEKLELAKELGADLVVNP 215
Query: 254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLS 313
                K  +   +    GG              Q AY   R+G G  +++G+  P  ++ 
Sbjct: 216 L----KEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGL--PPEEMP 268
Query: 314 LSSFEVLHSGKILMGSLFGGLK 335
           +  F+ + +G  ++GS+ G  K
Sbjct: 269 IPIFDTVLNGIKIIGSIVGTRK 290

>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 138 RFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA 197
           +F +++      F  V+       +++AH+ K    +P   A ++   ++TG   A   A
Sbjct: 111 KFSNVKDGVFGEFFHVNDAD----MNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELA 162
Query: 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG 257
           ++E+GS+VV+ G+G++GL    GA+L GA RIIGV       E  K +G T+ +N KN  
Sbjct: 163 DIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG- 221
Query: 258 DKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKG 296
              +   ++ +T+G G D      G +  + +A    + G
Sbjct: 222 --HIVDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG 259

>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 81/160 (50%), Gaps = 12/160 (7%)
Query: 138 RFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA 197
           +F +++      F  V+       +++AH+ K    +P   A ++   ++TG   A   A
Sbjct: 111 KFSNVKDGVFGEFFHVNDAD----MNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELA 162
Query: 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG 257
           ++++GS+VV+ G+G++GL    GA+L GA RIIGV       E  K +G T+ +N KN  
Sbjct: 163 DIQMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG- 221
Query: 258 DKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKG 296
              +   ++ +T+G G D      G +  + +A +  + G
Sbjct: 222 --HIVDQVMKLTNGKGVDRVIMAGGGSETLSQAVSMVKPG 259

>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 7/144 (4%)
Query: 156 FSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSI 213
           F EY  ++ A  ++  +   +P   A +++  ++TG   A   A++E+GS+VV+ G+G++
Sbjct: 120 FGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAV 178
Query: 214 GLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-G 272
           GL    GA+L GA RIIGV       E  K +G T+ +N KN     +   ++ +T+G G
Sbjct: 179 GLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG---HIEDQVMKLTNGKG 235
Query: 273 ADYCFECVGLASLVQEAYACCRKG 296
            D      G +  + +A    + G
Sbjct: 236 VDRVIMAGGGSETLSQAVKMVKPG 259

>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 7/144 (4%)
Query: 156 FSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSI 213
           F EY  ++ A  ++  +   +P   A +++  ++TG   A   A++E+G+TV + G+G +
Sbjct: 120 FGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIELGATVAVLGIGPV 178
Query: 214 GLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-G 272
           GL    GA+L GA RII V       +  K +G T+ VN K   D  +   I+++T+G G
Sbjct: 179 GLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVNYK---DGPIESQIMNLTEGKG 235
Query: 273 ADYCFECVGLASLVQEAYACCRKG 296
            D      G A ++  A    + G
Sbjct: 236 VDAAIIAGGNADIMATAVKIVKPG 259

>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization Length = 351

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 108/259 (41%), Gaps = 26/259 (10%)
Query: 41  SHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIP 100
           S++  VR +  S C SD+              ILGHEA+                   I 
Sbjct: 24  SYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGDRVI- 82
Query: 101 HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYT 160
                   C     +   + + FP   +  +   + S FKD              F EY 
Sbjct: 83  ------VPCTTPDWRSLEVQAGFPQHSNGMLAGWKFSNFKD------------GVFGEYF 124
Query: 161 VLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVA 218
            ++ A  ++  +   +P   A +++  ++TG   A   A++++GS+VV+ G+G++GL   
Sbjct: 125 HVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIQMGSSVVVIGIGAVGLMGI 183
Query: 219 EGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCF 277
            GA+L GA RIIGV       E  K +G T+ +N KN     +   ++ +T+G G D   
Sbjct: 184 AGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG---HIVDQVMKLTNGKGVDRVI 240
Query: 278 ECVGLASLVQEAYACCRKG 296
              G +  + +A +  + G
Sbjct: 241 MAGGGSETLSQAVSMVKPG 259

>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 76/144 (52%), Gaps = 7/144 (4%)
Query: 156 FSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSI 213
           F EY  ++ A  ++  +   +P   A +++  ++TG   A   A++++GS+VV+ G+G++
Sbjct: 120 FGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIQMGSSVVVIGIGAV 178
Query: 214 GLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-G 272
           GL    GA+L GA RIIGV       E  K +G T+ +N KN     +   ++ +T+G G
Sbjct: 179 GLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG---HIVDQVMKLTNGKG 235
Query: 273 ADYCFECVGLASLVQEAYACCRKG 296
            D      G +  + +A +  + G
Sbjct: 236 VDRVIMAGGGSETLSQAVSMVKPG 259

>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In Complex With Cacodylate Length = 360

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 69/151 (45%), Gaps = 12/151 (7%)
Query: 154 SSFSEYTVLDIAHVVKVDPT-------VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVV 206
           S+F +    ++ HV + D         + P  A +LS  V+TG   A   AN+++G TV 
Sbjct: 113 SNFKDGVFSEVFHVNEADANLALLPRDIKPEDAVMLSDMVTTGFHGA-ELANIKLGDTVC 171
Query: 207 IFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIII 266
           + G+G +GL    GA   GA RI  V       +I   +G T+ +N KN GD  + + I+
Sbjct: 172 VIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKN-GD--IVEQIL 228
Query: 267 DMTDG-GADYCFECVGLASLVQEAYACCRKG 296
             TDG G D      G      +A    + G
Sbjct: 229 KATDGKGVDKVVIAGGXVHTFAQAVKMIKPG 259

>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa Entamoeba Histolytica Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 11/125 (8%)
Query: 154 SSFSEYTVLDIAHVVKVDPT-------VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVV 206
           S+F +    ++ HV + D         + P  A +LS  V+TG   A   AN+++G TV 
Sbjct: 113 SNFKDGVFSEVFHVNEADANLALLPRDIKPEDAVMLSDMVTTGFHGA-ELANIKLGDTVC 171
Query: 207 IFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIII 266
           + G+G +GL    GA   GA RI  V       +I   +G T+ +N KN GD  + + I+
Sbjct: 172 VIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKN-GD--IVEQIL 228
Query: 267 DMTDG 271
             TDG
Sbjct: 229 KATDG 233

>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution Length = 359

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 134/347 (38%), Gaps = 52/347 (14%)
Query: 1   MDIEKPSNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPN---SHEVRVRIICTSLCHSD 57
           M IE+  +++ G   + +AA      +PL I++V  D P      +V VRI    +CH+D
Sbjct: 1   MRIEQDFSQSLGVE-RLKAARLHEYNKPLRIEDV--DYPRLEGRFDVIVRIAGAGVCHTD 57
Query: 58  VTF----WKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCR 113
           +      W     P   P  LGHE +                   I H       C+ CR
Sbjct: 58  LHLVQGMWHELLQPK-LPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACR 116
Query: 114 SKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173
           + +   C    F   P +  D                     F+E+       V+K+   
Sbjct: 117 AGEDMHCENLEF---PGLNID-------------------GGFAEFMRTSHRSVIKLPKD 154
Query: 174 VPPNR----ACLLSCGVST--GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 227
           +   +    A L   G++    V  A RT  +  G+ V I G+G +G    +  ++    
Sbjct: 155 ISREKLVEMAPLADAGITAYRAVKKAART--LYPGAYVAIVGVGGLGHIAVQLLKVMTPA 212
Query: 228 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLV 286
            +I +DV  EK ++ +R G    V+++    K V    +++T G G +   + VG  + V
Sbjct: 213 TVIALDVKEEKLKLAERLGADHVVDARRDPVKQV----MELTRGRGVNVAMDFVGSQATV 268
Query: 287 QEA-YACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332
               Y   R   G+ I++G    G +L   +  V+ S     GSL G
Sbjct: 269 DYTPYLLGR--MGRLIIVGY---GGELRFPTIRVISSEVSFEGSLVG 310

>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/306 (20%), Positives = 118/306 (38%), Gaps = 35/306 (11%)
Query: 21  IATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFW---KMKDFPAVFPRILGHE 77
           +   PG+ L ++   +  P  +EV +++    +C SDV +W   ++ DF    P +LGHE
Sbjct: 11  VVHGPGD-LRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVLGHE 69
Query: 78  AIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD-QT 136
           A                         A       C+  + NL     F  +P  P D   
Sbjct: 70  ASGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATP--PDDGNL 127
Query: 137 SRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT 196
            RF        +      +F E  +++                  LS G+      A R 
Sbjct: 128 CRFYKHNANFCYKLPDNVTFEEGALIEP-----------------LSVGIH-----ACRR 165
Query: 197 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256
           A V +G+ V++ G G IGL     A+  GA +++  D+ + +    K  G    +   N 
Sbjct: 166 AGVTLGNKVLVCGAGPIGLVNLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISNE 225
Query: 257 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS 316
             + +++ +  +     +   EC G+ + +Q        G G  +++G+   GS+  ++S
Sbjct: 226 SPEEIAKKVEGLLGSKPEVTIECTGVETSIQAGIYATHSG-GTLVLVGL---GSE--MTS 279
Query: 317 FEVLHS 322
             ++H+
Sbjct: 280 VPLVHA 285

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 65/293 (22%), Positives = 115/293 (39%), Gaps = 37/293 (12%)
Query: 19  AAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF---PRILG 75
           A   T PG    + EV V  P   EV ++++ TS+C +D+  ++  ++       P+I G
Sbjct: 6   AIXKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXG 65
Query: 76  HEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ 135
           HE                            C +C  CR  + ++C              Q
Sbjct: 66  HEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVC--------------Q 111
Query: 136 TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR 195
            ++   +  + +        F+EY V+   ++ K   ++PP  A L        +G A  
Sbjct: 112 NTKIFGVDTDGV--------FAEYAVVPAQNIWKNPKSIPPEYATL-----QEPLGNAVD 158
Query: 196 T--ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253
           T  A    G +V+I G G +GL     A+  GA  +I  +    + E+ K+ G    +N 
Sbjct: 159 TVLAGPISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINP 218
Query: 254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
               ++ V + + D+TDG G D   E  G    +++         G+  +LG+
Sbjct: 219 F---EEDVVKEVXDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGL 267

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 65/293 (22%), Positives = 115/293 (39%), Gaps = 37/293 (12%)
Query: 19  AAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF---PRILG 75
           A   T PG    + EV V  P   EV ++++ TS+C +D+  ++  ++       P+I G
Sbjct: 7   AIXKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXG 66
Query: 76  HEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ 135
           HE                            C +C  CR  + ++C              Q
Sbjct: 67  HEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVC--------------Q 112
Query: 136 TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR 195
            ++   +  + +        F+EY V+   ++ K   ++PP  A L        +G A  
Sbjct: 113 NTKIFGVDTDGV--------FAEYAVVPAQNIWKNPKSIPPEYATL-----QEPLGNAVD 159
Query: 196 T--ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253
           T  A    G +V+I G G +GL     A+  GA  +I  +    + E+ K+ G    +N 
Sbjct: 160 TVLAGPISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINP 219
Query: 254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
               ++ V + + D+TDG G D   E  G    +++         G+  +LG+
Sbjct: 220 F---EEDVVKEVXDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGL 268

>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 125/322 (38%), Gaps = 36/322 (11%)
Query: 29  LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFW---KMKDFPAVFPRILGHEAIXXXXXX 85
           L +++  +  P   EV +++    +C SDV ++   ++ DF    P ++GHEA       
Sbjct: 16  LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKV 75
Query: 86  XXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE 145
                               C  C  C+  K NLC    F  +P  P D         G 
Sbjct: 76  GKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATP--PDD---------GN 124
Query: 146 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTV 205
              ++V  + F            K+   V      LL   +S GV  A R A V++G+TV
Sbjct: 125 LARYYVHAADFCH----------KLPDNVSLEEGALLE-PLSVGV-HACRRAGVQLGTTV 172
Query: 206 VIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG--VTEFVNSKNCGDKSVSQ 263
           ++ G G IGL     A+  GA  ++       + E+ K  G  VT  V+     + S+ +
Sbjct: 173 LVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIE 231
Query: 264 IIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSG 323
            I        +   +C G    +       R G G  +++G+   GSQ+         + 
Sbjct: 232 RIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGM---GSQMVTVPLVNACAR 287
Query: 324 KILMGSLFGGLKAKSDIPILLK 345
           +I + S+F   +  +D PI L+
Sbjct: 288 EIDIKSVF---RYCNDYPIALE 306

>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By E. Histolytica Adh Length = 352

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 11/134 (8%)
Query: 138 RFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA 197
           +F +++      F  V+       +++AH+ K    +P   A ++   ++TG   A   A
Sbjct: 111 KFSNVKDGVFGEFFHVNDAD----MNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELA 162
Query: 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG 257
           N+++G TV + G+G +GL    GA   GA RI  V       +I   +G T+ +N KN G
Sbjct: 163 NIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKN-G 221
Query: 258 DKSVSQIIIDMTDG 271
           D  + + I+  TDG
Sbjct: 222 D--IVEQILKATDG 233

>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 111/310 (35%), Gaps = 46/310 (14%)
Query: 30  VIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE--AIXXXXXXXX 87
           V + VI +  +  EVRV+I  + LC SD+     K+    +P  LGHE            
Sbjct: 14  VAESVIPEIKHQDEVRVKIASSGLCGSDLPRI-FKNGAHYYPITLGHEFSGYIDAVGSGV 72
Query: 88  XXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 147
                      +P  L  C  C  C     + C+ + F  S    RD             
Sbjct: 73  DDLHPGDAVACVP--LLPCFTCPECLKGFYSQCAKYDFIGSR---RD------------- 114
Query: 148 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVI 207
                   F+EY V+   +V  +   +P      +   ++ G+ A       E    V+I
Sbjct: 115 ------GGFAEYIVVKRKNVFALPTDMPIEDGAFIE-PITVGLHAFHLAQGCE-NKNVII 166
Query: 208 FGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIID 267
            G G+IGL   + A   GA  +  +D+ SEK  + K FG  +  NS       +  ++ +
Sbjct: 167 IGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRE 226
Query: 268 MTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM 327
           +                L+ E       G  +T+ L V+  G    L+    LH    L 
Sbjct: 227 LR------------FNQLILET-----AGVPQTVELAVEIAGPHAQLALVGTLHQDLHLT 269
Query: 328 GSLFGGLKAK 337
            + FG +  K
Sbjct: 270 SATFGKILRK 279

>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 112/284 (39%), Gaps = 36/284 (12%)
Query: 53  LCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXX-XXXXIPHFLADCTECVG 111
           +CH+D+      DF      +LGHE I                    +  F   C  C  
Sbjct: 38  VCHTDLHV-AAGDFGNKAGTVLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEY 96
Query: 112 CRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171
           C S     C            R+  +    + G      + V+ ++          VKV 
Sbjct: 97  CVSGNETFC------------REVKNAGYSVDGGMAEEAIVVADYA----------VKVP 134
Query: 172 PTVPPNRACLLSC-GVSTGVGAAWRTANVEVGSTVVIFGLGSIG-LAVAEGARLCGATRI 229
             + P  A  ++C GV+T    A + + V+ G   VIFG G +G LA+     + GA ++
Sbjct: 135 DGLDPIEASSITCAGVTTY--KAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGA-KV 191
Query: 230 IGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQE 288
           I VD+  +K  + K+ G    +NS   GD +    I  +T G G      C  +A +  E
Sbjct: 192 IAVDINQDKLNLAKKIGADVTINS---GDVNPVDEIKKITGGLGVQSAIVC-AVARIAFE 247
Query: 289 AYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332
                 K  GK + + V  P ++++LS   V+  G  + GSL G
Sbjct: 248 QAVASLKPMGKMVAVAV--PNTEMTLSVPTVVFDGVEVAGSLVG 289

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/329 (22%), Positives = 123/329 (37%), Gaps = 70/329 (21%)
Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK--------MKDFPAV 69
           RA      G+PL ++++ +  P   +V ++I    +CHSDV   +        ++D    
Sbjct: 2   RAMRLVEIGKPLKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61
Query: 70  FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P  LGHE                       +       C  CR  + +LC       SP
Sbjct: 62  LPVTLGHEIAGRIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCD------SP 115
Query: 130 -WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVS 187
            W+  +    + +        +V V  +     L     V+  P         L+C GV+
Sbjct: 116 RWLGINYDGAYAE--------YVLVPHYKYLYKLRRLSAVEAAP---------LTCSGVT 158
Query: 188 TGVGAAWRTANVEVGSTVVIFG----LGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243
           T    A R A+++   T+V+ G    LG++ + +A+   + GAT IIGVDV  E  E  K
Sbjct: 159 TY--RAVRKASLDPSKTLVVIGAGGGLGTMAIQIAKA--VSGAT-IIGVDVREEALEAAK 213
Query: 244 RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 303
           R G    +N+ +     VS+I                              +G G   V+
Sbjct: 214 RAGADYVINASS--QDPVSEI--------------------------RRITQGKGADAVI 245
Query: 304 GVDQPGSQLSLSSFEVLHSGKILMGSLFG 332
            ++     LS+  + +   GK +M  LFG
Sbjct: 246 DLNNSEKTLSIYPYVLAKQGKYVMVGLFG 274

>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 112/284 (39%), Gaps = 36/284 (12%)
Query: 53  LCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXX-XXXXIPHFLADCTECVG 111
           +CH+D+      D+      +LGHE I                    +  F   C  C  
Sbjct: 38  VCHTDLHV-AAGDYGNKAGTVLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEY 96
Query: 112 CRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171
           C S     C            R+  +    + G      + V+ ++          VKV 
Sbjct: 97  CVSGNETFC------------REVKNAGYSVDGGMAEEAIVVADYA----------VKVP 134
Query: 172 PTVPPNRACLLSC-GVSTGVGAAWRTANVEVGSTVVIFGLGSIG-LAVAEGARLCGATRI 229
             + P  A  ++C GV+T    A + + V+ G   VIFG G +G LA+     + GA ++
Sbjct: 135 DGLDPIEASSITCAGVTTY--KAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGA-KV 191
Query: 230 IGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQE 288
           I VD+  +K  + K+ G    +NS   GD +    I  +T G G      C  +A +  E
Sbjct: 192 IAVDINQDKLNLAKKIGADVIINS---GDVNPVDEIKKITGGLGVQSAIVC-AVARIAFE 247
Query: 289 AYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332
                 K  GK + + +  P ++++LS   V+  G  + GSL G
Sbjct: 248 QAVASLKPMGKMVAVAL--PNTEMTLSVPTVVFDGVEVAGSLVG 289

>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 85/230 (36%), Gaps = 29/230 (12%)
Query: 29  LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXX 88
           L I E  +  P++ EVRV++    +C SD   ++  +  A +PR++GHE           
Sbjct: 32  LSIIEREIPTPSAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEG 91
Query: 89  XXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 148
                         +  C  C  C   K N+C+                    L    +H
Sbjct: 92  VESARVGERVAVDPVVSCGHCYPCSIGKPNVCTT-------------------LAVLGVH 132
Query: 149 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLS--CGVSTGVGAAWRTANVEVGSTVV 206
              +   FSEY V+   +  K+   V    A ++      +   G    T N     TV+
Sbjct: 133 ---ADGGFSEYAVVPAKNAWKIPEAVADQYAVMIEPFTIAANVTGHGQPTEN----DTVL 185
Query: 207 IFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255
           ++G G IGL + +  + +     +I  D I E+ E  K  G    +N+  
Sbjct: 186 VYGAGPIGLTIVQVLKGVYNVKNVIVADRIDERLEKAKESGADWAINNSQ 235

>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/297 (20%), Positives = 114/297 (38%), Gaps = 39/297 (13%)
Query: 16  QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF---PR 72
           + +A + T P     + EV V  P   EV ++++ TS+C +D+  ++  ++       P+
Sbjct: 4   KMQAIMKTKPAYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQ 63
Query: 73  ILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
           I+GHE                            C +C  C+  + ++C            
Sbjct: 64  IMGHEVAGEVVEVGPGVEDLQVGDYISVETHIVCGKCYACKHNRYHVCQ----------- 112
Query: 133 RDQTSRFK-DLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVG 191
              T  F  D+ G           F+ Y ++   +  K    +PP  A L        +G
Sbjct: 113 --NTKIFGVDMDG----------VFAHYAIVPAKNAWKNPKDMPPEYAAL-----QEPLG 155
Query: 192 AAWRT--ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            A  T  A    G + +I G G +GL     A+  GA  +I  +    + ++ K+ G   
Sbjct: 156 NAVDTVLAGPIAGRSTLITGAGPLGLLGIAVAKASGAYPVIVSEPSEFRRKLAKKVGADY 215
Query: 250 FVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
            VN     ++   + ++D+TDG G +   E  G    +++       G G+  +LG+
Sbjct: 216 VVNPF---EEDPVKFVMDITDGAGVEVFLEFSGAPKALEQGLKAVTPG-GRVSLLGL 268

>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/306 (19%), Positives = 115/306 (37%), Gaps = 35/306 (11%)
Query: 21  IATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFW---KMKDFPAVFPRILGHE 77
           +   PG+ L ++   +  P  +EV +R+    +C SDV +W   ++ +F    P +LGHE
Sbjct: 12  VVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHE 70
Query: 78  AIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD-QT 136
           A                         A       C+  + NL  +  F  +P  P D   
Sbjct: 71  ASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATP--PDDGNL 128
Query: 137 SRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT 196
            RF        +      +F E  +++                  LS G+      A R 
Sbjct: 129 CRFYKHNAAFCYKLPDNVTFEEGALIEP-----------------LSVGIH-----ACRR 166
Query: 197 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256
             V +G  V++ G G IG+     A+  GA +++  D+ + +    K  G    +     
Sbjct: 167 GGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKE 226
Query: 257 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS 316
             + +++ +        +   EC G  + +Q      R G G  +++G+   GS+  +++
Sbjct: 227 SPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGL---GSE--MTT 280
Query: 317 FEVLHS 322
             +LH+
Sbjct: 281 VPLLHA 286

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 84/351 (23%), Positives = 136/351 (38%), Gaps = 48/351 (13%)
Query: 18  RAAIATAPGEPLVID--EVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV-FPRIL 74
           RA +  A G P V++  ++ V  P   EVRVR+   +L H DV   K    P +  P +L
Sbjct: 2   RAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVL 61
Query: 75  GHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           G +                     + +    C  C  C + + NLC           PR 
Sbjct: 62  GADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLC-----------PRY 110
Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194
           Q      + GE  H      +++EY VL  A++       P N +   +  +      AW
Sbjct: 111 Q------ILGEHRH-----GTYAEYVVLPEANLA----PKPKNLSFEEAAAIPLTFLTAW 155
Query: 195 RTA----NVEVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
           +       V  G  V++   GS + +A  + A+L GA R+I      +K    K  G  E
Sbjct: 156 QMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADE 214
Query: 250 FVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 308
            VN  +       + +  +T G GAD   +  G  +L  E         G+  + G    
Sbjct: 215 TVNYTH---PDWPKEVRRLTGGKGADKVVDHTG--ALYFEGVIKATANGGRIAIAGASS- 268
Query: 309 GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDI-PILLKRYMDKWSYVPFSG 358
           G + +L    V +    ++GS    + +KS + PIL  R++++    P  G
Sbjct: 269 GYEGTLPFAHVFYRQLSILGST---MASKSRLFPIL--RFVEEGKLKPVVG 314

>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/298 (19%), Positives = 106/298 (35%), Gaps = 30/298 (10%)
Query: 21  IATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFW---KMKDFPAVFPRILGHE 77
           +   PG+ L ++   +  P  +EV +R     +C SDV +W   ++ +F    P +LGHE
Sbjct: 12  VVHGPGD-LRLENYPIPEPGPNEVLLRXHSVGICGSDVHYWEYGRIGNFIVKKPXVLGHE 70
Query: 78  AIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD-QT 136
           A                         A       C+  + NL  +  F  +P  P D   
Sbjct: 71  ASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKXGRYNLSPSIFFCATP--PDDGNL 128
Query: 137 SRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT 196
            RF        +      +F E  +++                  LS G+      A R 
Sbjct: 129 CRFYKHNAAFCYKLPDNVTFEEGALIEP-----------------LSVGIH-----ACRR 166
Query: 197 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256
             V +G  V++ G G IG      A+  GA +++  D+ + +    K  G    +     
Sbjct: 167 GGVTLGHKVLVCGAGPIGXVTLLVAKAXGAAQVVVTDLSATRLSKAKEIGADLVLQISKE 226
Query: 257 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSL 314
             + +++ +        +   EC G  + +Q      R G G  +++G+    + + L
Sbjct: 227 SPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGSEXTTVPL 283

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	362
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	1e-174
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	1e-170
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	1e-170
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	1e-169
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	1e-168
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	1e-134
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	1e-115
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	5e-72
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	5e-59
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	9e-58
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	2e-54
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	4e-54
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	2e-53
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	4e-50
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	9e-50
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	7e-48
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	4e-46
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	7e-45
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	3e-44
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	4e-43
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	8e-43
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	7e-41
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	1e-40
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	3e-40
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	1e-39
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	1e-35
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	2e-34
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	9e-26
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	1e-23
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	2e-23
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	2e-22
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	2e-21
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	3e-21
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	2e-20
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	2e-20
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	1e-19
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	3e-19
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	6e-19
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	1e-17
3gms_A	340	Putative NADPH:quinone reductase; structural genom	2e-15
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	8e-13
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	1e-12
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	1e-12
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	3e-12
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	3e-12
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	4e-11
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	6e-11
4eye_A	342	Probable oxidoreductase; structural genomics, niai	7e-11
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	1e-10
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	3e-10
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	5e-09
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	5e-08
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	2e-07
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	3e-07
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	5e-07
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	2e-04
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	1e-05
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	2e-04
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	3e-04
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	3e-04

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  488 bits (1258), Expect = e-174
 Identities = 149/340 (43%), Positives = 213/340 (62%), Gaps = 3/340 (0%)

Query: 11  AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF 70
           A + I+C+AA+A   G+PL I+E+ V PP +HEVR++II T++CH+D       D    F
Sbjct: 1   ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 60

Query: 71  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
           P ILGH   G+VESVGE V  +  GD VIP ++  C EC  C + K NLC          
Sbjct: 61  PVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120

Query: 131 MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGV 190
           +  D TSRF   +G+TI H++  S+FSEYTV+    V K+DP  P ++ CLL CG+STG 
Sbjct: 121 LMPDGTSRFT-CKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY 179

Query: 191 GAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250
           GAA  TA +E GS   +FGLG +GLAV  G ++ GA+RIIGVD+  +KF   K FG TE 
Sbjct: 180 GAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATEC 239

Query: 251 VNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS 310
           +N ++   K + +++I+MTDGG DY FEC+G   +++ A   C KGWG ++V+GV   G 
Sbjct: 240 INPQDF-SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGE 298

Query: 311 QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
           +++   F+++ +G+   G+ FGG K+   +P L+  YM K
Sbjct: 299 EIATRPFQLV-TGRTWKGTAFGGWKSVESVPKLVSEYMSK 337

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  478 bits (1233), Expect = e-170
 Identities = 139/345 (40%), Positives = 198/345 (57%), Gaps = 10/345 (2%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           T GK I+C+AAIA   G PL I+E+ V PP + EVR+++I T +C +D+     K   A+
Sbjct: 2   TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKK-KAL 60

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FP +LGHE  G+VESVG  V     GD VIP F   C  C  C S   NLC        P
Sbjct: 61  FPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYP 120

Query: 130 W----MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
                +  D+TSRF   +G +I+HF+ VSSFS+YTV+  A++ +VD      R CL+ CG
Sbjct: 121 TIDQELMEDRTSRFT-CKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCG 179

Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245
            S+G GAA  TA V  GST  +FGLG +GL+   G ++ GA+RII +D+  EKF   K  
Sbjct: 180 FSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL 239

Query: 246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
           G T+ +N +   DK V  +I ++T GG DY  +C G A  ++ A  C   GWG   V+G 
Sbjct: 240 GATDCLNPREL-DKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGA 298

Query: 306 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
                ++++ + +V+  G+ + G+ FGG K+   +P L+  Y +K
Sbjct: 299 --KVDEMTIPTVDVI-LGRSINGTFFGGWKSVDSVPNLVSDYKNK 340

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  477 bits (1229), Expect = e-170
 Identities = 142/341 (41%), Positives = 208/341 (60%), Gaps = 4/341 (1%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           T GK I+C+AA+A    +PLVI+E+ VD P+++E+R++II T +CH+D+           
Sbjct: 2   TVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDG 61

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FP +LGHE  G+VESVG  V     G+ VIP F++ C EC  C+S K N C       SP
Sbjct: 62  FPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESP 121

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
            +   + +RF   +G  +  F+  S+FS+YTV++   V K+DP+ P +  CLL CGVSTG
Sbjct: 122 DVMSPKETRFT-CKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTG 180

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            GAA  TA VE GST  +FGLG++GLA   G    GA RII VD+  +KFE  K FG T+
Sbjct: 181 FGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATD 240

Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
           FVN  +   + +SQ++  MT+GG D+  ECVG   +++ A   C KGWG ++++G     
Sbjct: 241 FVNPNDH-SEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWT-DL 298

Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             ++    +++ +G+   GS+FGG K K  +P ++K Y+DK
Sbjct: 299 HDVATRPIQLI-AGRTWKGSMFGGFKGKDGVPKMVKAYLDK 338

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  475 bits (1226), Expect = e-169
 Identities = 138/341 (40%), Positives = 202/341 (59%), Gaps = 4/341 (1%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD            
Sbjct: 2   TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-VTP 60

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA G+VES+GE V  V  GD VIP F   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+  +KF   K  G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239

Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G ++++GV    
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298

Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
             LS++   +L SG+   G++FGG K+K  +P L+  +M K
Sbjct: 299 QNLSMNPMLLL-SGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  474 bits (1221), Expect = e-168
 Identities = 141/341 (41%), Positives = 196/341 (57%), Gaps = 6/341 (1%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I C+AA+A  P +PL ++ + V PP +HEVR++I+ + +C SD +  K    P+ 
Sbjct: 3   TAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEII-PSK 61

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FP ILGHEA+GVVES+G  V  V  GD VIP F+  C  C  C+S   N C         
Sbjct: 62  FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKT 121

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
            +  D TSRF   RG+ I++ +  S+F+EYTV+    V K+DP  P   +CL+ CG +TG
Sbjct: 122 GLMADMTSRFT-CRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLE-SCLIGCGFATG 179

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            GAA  TA V  GST  +FGLG +G +   G +  GA+RIIGV    +KF      G TE
Sbjct: 180 YGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATE 239

Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            +N K+  DK + ++I + T+GG DY  EC G    +  A      G G T+VLG+  P 
Sbjct: 240 CLNPKDY-DKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPN 298

Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
            +L L    +L +G+ L GS+FGG K + ++  L+  YM K
Sbjct: 299 ERLPLDPLLLL-TGRSLKGSVFGGFKGE-EVSRLVDDYMKK 337

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  387 bits (997), Expect = e-134
 Identities = 94/339 (27%), Positives = 156/339 (46%), Gaps = 7/339 (2%)

Query: 13  KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPR 72
           +     AA+    G    +  + +  P   EV V+++ T +CH+D+     + +P   P 
Sbjct: 3   ELKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRD-QKYPVPLPA 61

Query: 73  ILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
           +LGHE  G++E++G NV  +  GD V+  +   C +C  C +     CS F  +      
Sbjct: 62  VLGHEGSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGAD 120

Query: 133 RDQTSRFKDLRGET-IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVG 191
            +               HF + SSF+ Y +    + VKV   VP      L CG+ TG G
Sbjct: 121 SEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAG 180

Query: 192 AAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251
           A      V   S+ V +G G++GL+    A++CGA+ II VD++  + E+ K+ G T  +
Sbjct: 181 ACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVI 240

Query: 252 NSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ 311
           NSK    +     I ++TDGG ++  E  G   ++++         GK  V+G  Q G+ 
Sbjct: 241 NSK---TQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTT 296

Query: 312 LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
                 ++L  GK ++G + G    K  IP L++ Y   
Sbjct: 297 AQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQG 335

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  338 bits (870), Expect = e-115
 Identities = 79/346 (22%), Positives = 128/346 (36%), Gaps = 27/346 (7%)

Query: 14  PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRI 73
            ++  A +     +PLV  E  +       + V I+   +C SDV  ++ +D     P I
Sbjct: 15  GLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPII 74

Query: 74  LGHEAIGVVESVGENVDG-----VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKIS 128
           LGHE  G V  V           +  GD+++ +    C EC  C+  K            
Sbjct: 75  LGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYG 134

Query: 129 PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH-VVKVDPTVPPNRACLLSCGVS 187
             + R   S +  LRG           +S + VLD    V+KV      +   +  C  +
Sbjct: 135 --INRG-CSEYPHLRG----------CYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGA 181

Query: 188 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247
           T   A         G TVVI G G +GL     AR  GA  +I +     + ++ +  G 
Sbjct: 182 TAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGA 241

Query: 248 TEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306
              +N +    +   + I+D+T G GAD+  E  G +  + E     R+G G   V GV 
Sbjct: 242 DLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVA 300

Query: 307 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKS--DIPILLKRYMDK 350
            P   +       ++   +L  + F G+           +      
Sbjct: 301 VPQDPVPFK----VYEWLVLKNATFKGIWVSDTSHFVKTVSITSRN 342

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  227 bits (580), Expect = 5e-72
 Identities = 75/319 (23%), Positives = 123/319 (38%), Gaps = 28/319 (8%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKM--KDFPAVFPRILG 75
           +A   T  G   V+ ++    P   E+ +++    LCHSD+    M    +    P  LG
Sbjct: 2   KAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLG 61

Query: 76  HEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ 135
           HE +G V  +GE V G   GD V  +    C  C  C   + N C+              
Sbjct: 62  HEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRA------------ 109

Query: 136 TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVSTGVGAAW 194
                   G T     S  S +EY ++D A  +     + P  A  L+  G++     + 
Sbjct: 110 -----ADLGITPPGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISR 164

Query: 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254
               +  GST V+ G+G +G    +  R   A R+I VD+  ++  + +  G    V S 
Sbjct: 165 VLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKS- 223

Query: 255 NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLS 313
                  +  I ++T G GA   F+ VG  S +  A        G   V+G+       +
Sbjct: 224 ---GAGAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGI--HAGAHA 277

Query: 314 LSSFEVLHSGKILMGSLFG 332
              F ++  G  ++   +G
Sbjct: 278 KVGFFMIPFGASVVTPYWG 296

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  193 bits (493), Expect = 5e-59
 Identities = 74/324 (22%), Positives = 131/324 (40%), Gaps = 39/324 (12%)

Query: 18  RAAIATAPGEPLVIDEVIV-DPPNSHEVRVRIICTSLCHSDVTFWK---MKDFPAVFPRI 73
           +AA      +PL I++V         +V VRI    +CH+D+   +    +      P  
Sbjct: 17  KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYT 76

Query: 74  LGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR 133
           LGHE +G +E V E V+G+ +GD VI H       C+ CR+ +   C    F        
Sbjct: 77  LGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFP------- 129

Query: 134 DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR---ACLLSCGVSTGV 190
                     G  I        F+E+       V+K+   +   +      L+    T  
Sbjct: 130 ----------GLNID-----GGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAY 174

Query: 191 GAAWRT-ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
            A  +    +  G+ V I G+G +G    +  ++     +I +DV  EK ++ +R G   
Sbjct: 175 RAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADH 234

Query: 250 FVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 308
            V+++    +   + ++++T G G +   + VG  + V        +  G+ I++G    
Sbjct: 235 VVDAR----RDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVGY--- 286

Query: 309 GSQLSLSSFEVLHSGKILMGSLFG 332
           G +L   +  V+ S     GSL G
Sbjct: 287 GGELRFPTIRVISSEVSFEGSLVG 310

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  190 bits (486), Expect = 9e-58
 Identities = 74/320 (23%), Positives = 130/320 (40%), Gaps = 43/320 (13%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           +A    + G  + +  V +  P   ++ V++    +C +D       +FP+  P  LGHE
Sbjct: 25  KAVRLESVGN-ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLH-GEFPSTPPVTLGHE 82

Query: 78  AIGVVESVGENVDGVVEGD--VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ 135
             G+V   G  V  +  G      P+    C  C  C++ + NLC               
Sbjct: 83  FCGIVVEAGSAVRDIAPGARITGDPNIS--CGRCPQCQAGRVNLC--------------- 125

Query: 136 TSRFKDLRGETIHHFVSVS---SFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGVSTG 189
               ++LR       + +     F+EY ++      ++  T+ P        L+C +   
Sbjct: 126 ----RNLR------AIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCL--- 172

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
                  + ++ GSTV I G G IGL   + ARL GAT +I     + K  + +  G T 
Sbjct: 173 --HGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATA 230

Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            V+             + +  GG D   EC G+A  V+++    + G G  ++LGV   G
Sbjct: 231 TVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQG 289

Query: 310 SQLSLSSFEVLHSGKILMGS 329
            ++ +  F++L     ++GS
Sbjct: 290 EKVEIEPFDILFRELRVLGS 309

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  181 bits (461), Expect = 2e-54
 Identities = 77/322 (23%), Positives = 129/322 (40%), Gaps = 38/322 (11%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK--MKDFPAVFPRILG 75
           +AA+     EPL I++V +  P   EV +RI    +C +D+  WK          P ILG
Sbjct: 5   KAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILG 64

Query: 76  HEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ 135
           HE  G +  VGE +  V +GD V+ +       C  CR  K N+C               
Sbjct: 65  HENAGTIVEVGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKN------------- 110

Query: 136 TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGA--- 192
               + + G+T +       FSEY ++  +  +    ++ P  A  L+   +T +GA   
Sbjct: 111 ----QIIPGQTTN-----GGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQ 161

Query: 193 AWRTANVEVGSTVVIFGLGSIG-LAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251
           A    +      V++ G+G +    +     L     I+G+    +  +     G     
Sbjct: 162 ALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVS 221

Query: 252 NSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS 310
             K+        +I  +TDG GA    + VG             +  G  I++G+   G 
Sbjct: 222 EMKD-----AESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGM--EGK 273

Query: 311 QLSLSSFEVLHSGKILMGSLFG 332
           ++SL +F+     K L+GS +G
Sbjct: 274 RVSLEAFDTAVWNKKLLGSNYG 295

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  180 bits (459), Expect = 4e-54
 Identities = 78/328 (23%), Positives = 132/328 (40%), Gaps = 45/328 (13%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK--------MKDFPAV 69
           RA      G+PL + E+ V  P   +V +++    +CHSDV   +        ++D    
Sbjct: 2   RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P  LGHE  G +E VG+ V G  +GD+V  +       C  CR  + +LC +  +    
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL--- 118

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
                         G          +++EY ++     +     +    A  L+C   T 
Sbjct: 119 --------------GINFD-----GAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITT 159

Query: 190 VGAAWRTANVEVGSTVVIF----GLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245
             A  R A+++   T+++     GLG++ + +A    + GA  IIGVDV  E  E  KR 
Sbjct: 160 YRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIA--KAVSGA-TIIGVDVREEAVEAAKRA 215

Query: 246 GVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 304
           G    +N+     +     I  +T+  G D   +       +        K  GK +++G
Sbjct: 216 GADYVINAS---MQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVG 271

Query: 305 VDQPGSQLSLSSFEVLHSGKILMGSLFG 332
           +   G+ L   +  +  S    +GSL G
Sbjct: 272 L--FGADLHYHAPLITLSEIQFVGSLVG 297

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  178 bits (455), Expect = 2e-53
 Identities = 72/308 (23%), Positives = 121/308 (39%), Gaps = 42/308 (13%)

Query: 18  RAAIATAPGEPLVIDEV-IVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGH 76
           ++ +    G  + + E  I +  +  EVRV+I  + LC SD+     K+    +P  LGH
Sbjct: 2   KSVVNDTDGI-VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIF-KNGAHYYPITLGH 59

Query: 77  EAIGVVESVGENVDGVVEGD--VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           E  G +++VG  VD +  GD    +P     C  C  C     + C+ + F  S    RD
Sbjct: 60  EFSGYIDAVGSGVDDLHPGDAVACVPLLP--CFTCPECLKGFYSQCAKYDFIGSR---RD 114

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGVSTGVG 191
                    G           F+EY V+   +V  +   +P         ++ G+     
Sbjct: 115 ---------G----------GFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGL----- 150

Query: 192 AAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251
            A+  A       V+I G G+IGL   + A   GA  +  +D+ SEK  + K FG  +  
Sbjct: 151 HAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTF 210

Query: 252 NSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS 310
           NS    + S  Q+   + +        E  G+   V+ A         +  ++G      
Sbjct: 211 NSS---EMSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH-AQLALVGTLHQDL 266

Query: 311 QLSLSSFE 318
            L+ ++F 
Sbjct: 267 HLTSATFG 274

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  170 bits (432), Expect = 4e-50
 Identities = 68/299 (22%), Positives = 110/299 (36%), Gaps = 48/299 (16%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK---MKDFPAVFPRIL 74
           RA    AP E L + +  V  P   E+ VR+   S+C +D+  WK           P + 
Sbjct: 2   RALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVT 61

Query: 75  GHEAIGVVESVGENVDGVVEGDVVI--PHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
           GHE  GVVE+VG  V     GD V    H +  C  C  CR+   ++C            
Sbjct: 62  GHEFSGVVEAVGPGVRRPQVGDHVSLESHIV--CHACPACRTGNYHVC------------ 107

Query: 133 RDQTSRFKDLRGETIHHFVSVS---SFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGV 186
                   + +       + V     F+EY V+   +       +P   A +       V
Sbjct: 108 -------LNTQ------ILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAV 154

Query: 187 STGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 246
                      +   G +V+I G G IGL  A   R  GA  I+  D    +    + + 
Sbjct: 155 -----HTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYA 209

Query: 247 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
               VN     ++ + +++  +T  G +   E  G  + + +       G G+  +LG+
Sbjct: 210 -DRLVNPL---EEDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGI 263

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  169 bits (430), Expect = 9e-50
 Identities = 73/324 (22%), Positives = 128/324 (39%), Gaps = 50/324 (15%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF---PRIL 74
            A + T PG    + EV V  P   EV ++++ TS+C +D+  ++  ++       P+I+
Sbjct: 6   VAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIM 65

Query: 75  GHEAIGVVESVGENVDGVVEGD--VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
           GHE  G V  +G  V+G+  GD   V  H +  C +C  CR  + ++C            
Sbjct: 66  GHEVAGEVVEIGPGVEGIEVGDYVSVETHIV--CGKCYACRRGQYHVCQN---------- 113

Query: 133 RDQTSRFKDLRGETIHHFVSVS---SFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGV 186
                               V     F+EY V+   ++ K   ++PP  A L   L   V
Sbjct: 114 ---------------TKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAV 158

Query: 187 STGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 246
                          G +V+I G G +GL     A+  GA  +I  +    + E+ K+ G
Sbjct: 159 D----TVLAG--PISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVG 212

Query: 247 VTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
               +N        V + ++D+TDG G D   E  G    +++         G+  +LG+
Sbjct: 213 ADYVINPFEE---DVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGL 268

Query: 306 DQPGSQLSLSSFEVLHSGKILMGS 329
                 +  ++  ++     + G 
Sbjct: 269 YPGKVTIDFNNL-IIFKALTIYGI 291

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  164 bits (418), Expect = 7e-48
 Identities = 67/301 (22%), Positives = 116/301 (38%), Gaps = 34/301 (11%)

Query: 11  AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK---MKDFP 67
           A       + +   PG+ L ++   +  P  +EV +R+    +C SDV +W+   + +F 
Sbjct: 2   AAAKPNNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFI 60

Query: 68  AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI 127
              P +LGHEA G VE VG +V  +  GD V     A       C+  + NL  +  F  
Sbjct: 61  VKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCA 120

Query: 128 SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSC 184
           +P  P D                        +   + A   K+   V      L   LS 
Sbjct: 121 TP--PDDGN-------------------LCRFYKHNAAFCYKLPDNVTFEEGALIEPLSV 159

Query: 185 GVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244
           G+      A R   V +G  V++ G G IG+     A+  GA +++  D+ + +    K 
Sbjct: 160 GI-----HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE 214

Query: 245 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 304
            G    +       + +++ +        +   EC G  + +Q      R G G  +++G
Sbjct: 215 IGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVG 273

Query: 305 V 305
           +
Sbjct: 274 L 274

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  160 bits (406), Expect = 4e-46
 Identities = 75/308 (24%), Positives = 122/308 (39%), Gaps = 37/308 (12%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK---MKDFPAVFPRIL 74
            +A+     + L +++  +  P   EV +++    +C SDV +++   + DF    P ++
Sbjct: 6   LSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 64

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           GHEA G V  VG+NV  + +GD V       C  C  C+  K NLC    F  +P  P D
Sbjct: 65  GHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATP--PDD 122

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGVSTGVG 191
                                 + Y V       K+   V      L   LS GV     
Sbjct: 123 GN-------------------LARYYVHAADFCHKLPDNVSLEEGALLEPLSVGV----- 158

Query: 192 AAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG--VTE 249
            A R A V++G+TV++ G G IGL     A+  GA  ++       + E+ K  G  VT 
Sbjct: 159 HACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKNCGADVTL 217

Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
            V+     + S+ + I        +   +C G    +       R G G  +++G+    
Sbjct: 218 VVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGSQM 276

Query: 310 SQLSLSSF 317
             + L + 
Sbjct: 277 VTVPLVNA 284

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  157 bits (398), Expect = 7e-45
 Identities = 68/308 (22%), Positives = 111/308 (36%), Gaps = 40/308 (12%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK---MKDFPAVFPRIL 74
           +  +  +   P +      +     EV V +  T +C SDV FWK   +         +L
Sbjct: 17  QHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVL 76

Query: 75  GHEAIGVVESVGENVDGVVEGD-VVI-PHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
           GHE+ G V +V  +V  +  GD V I P  +  C  C  C + + N C    F  +P +P
Sbjct: 77  GHESAGEVIAVHPSVKSIKVGDRVAIEPQVI--CNACEPCLTGRYNGCERVDFLSTPPVP 134

Query: 133 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGVSTG 189
                      G              Y         K+   +      +   LS  +   
Sbjct: 135 -----------G----------LLRRYVNHPAVWCHKI-GNMSYENGAMLEPLSVAL--- 169

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
             A  + A V +G  V+I G G IGL     A+  GA  ++  D+   + +  K      
Sbjct: 170 --AGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEV 227

Query: 250 FVNSKNCGD-KSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 307
             +       +  ++ I++   G       EC G+ S +  A    + G GK  V+GV +
Sbjct: 228 VTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFG-GKVFVIGVGK 286

Query: 308 PGSQLSLS 315
              Q+   
Sbjct: 287 NEIQIPFM 294

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  155 bits (395), Expect = 3e-44
 Identities = 63/357 (17%), Positives = 109/357 (30%), Gaps = 66/357 (18%)

Query: 5   KPSNKTAGKPIQCRAAIATAPGEPLVIDEVIV-DPPNSHEVRVRIICTSLCHSDVTFWK- 62
           K   K     +    +      E + ++EV         E+ +++    +C SDV   + 
Sbjct: 19  KLGPKDIEGKLTWLGSKVWRYPE-VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQT 77

Query: 63  ------MKDFPAVFPRILGHEAIGVVESVGENV------DGVVEGD--VVIPHFLADCTE 108
                 +      FP  LGHE  GVV   G              G+           C  
Sbjct: 78  DEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLW--CGH 135

Query: 109 CVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVS---SFSEYTVLDIA 165
           C  C     N C                            + +  +   +F+EY  +D  
Sbjct: 136 CRPCAEGFPNHCEN-------------------------LNELGFNVDGAFAEYVKVDAK 170

Query: 166 HVVKV-------DPTVPPNRACL---LSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGL 215
           +   +       +         L    S   +       R   +  G  VVI G G IGL
Sbjct: 171 YAWSLRELEGVYEGDRLFLAGSLVEPTSVAYN---AVIVRGGGIRPGDNVVILGGGPIGL 227

Query: 216 AVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GAD 274
           A     +  GA+++I  +    +  + K  G    ++       +  + ++D T+G GA 
Sbjct: 228 AAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKE---NFVEAVLDYTNGLGAK 284

Query: 275 YCFECVGLASLVQEA--YACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS 329
              E  G+  LV         R       V  V +  +++ L+          ++GS
Sbjct: 285 LFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGS 341

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score =  151 bits (385), Expect = 4e-43
 Identities = 65/306 (21%), Positives = 104/306 (33%), Gaps = 40/306 (13%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           +     + G+ +   E     P   +  VR +  + C SD+              ILGHE
Sbjct: 2   KGFAMLSIGK-VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHE 60

Query: 78  AIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQT 136
           A+G V  VG  V     GD VV+P  +         +                       
Sbjct: 61  AVGEVVEVGSEVKDFKPGDRVVVP-AITPDWRTSEVQRGYHQHSG--------------- 104

Query: 137 SRFKDLRGETIHHFVSVSSFSEYTVLDIAHV-------VKVDPTVPPNRACLLSCGVSTG 189
                +        V    F E+      HV         +   +P   A ++   ++TG
Sbjct: 105 ----GMLAGWKFSNVKDGVFGEF-----FHVNDADMNLAHLPKEIPLEAAVMIPDMMTTG 155

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
              A   AN+++G TV + G+G +GL    GA   GA RI  V       +I   +G T+
Sbjct: 156 FHGA-ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATD 214

Query: 250 FVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 308
            +N K   +  + + I+  TDG G D      G      +A    + G      +     
Sbjct: 215 IINYK---NGDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPG-SDIGNVNYLGE 270

Query: 309 GSQLSL 314
           G  + +
Sbjct: 271 GDNIDI 276

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  151 bits (383), Expect = 8e-43
 Identities = 55/330 (16%), Positives = 103/330 (31%), Gaps = 44/330 (13%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK---MKDFPAVFPRIL 74
           +A       +  V+ E     P S E  VR +   +C +D                  +L
Sbjct: 2   KAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVL 61

Query: 75  GHEAIGVVESVGENVDGVVEGD--VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
           GHEA+GVV  V  N   + EGD  V                  + ++     +     + 
Sbjct: 62  GHEAVGVV--VDPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVG 119

Query: 133 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL--LSCGV-STG 189
                      G            SE+      ++V++  +       +  +S    +  
Sbjct: 120 AH---------G----------YMSEFFTSPEKYLVRIPRSQAELGFLIEPISITEKALE 160

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL--CGATRIIGV---DVISEKFEIGKR 244
              A R+A     S+  + G GS+GL      ++   G   +  +   D      +I + 
Sbjct: 161 HAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE 220

Query: 245 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 304
              T   + +        + + D+     D+ +E  G      ++        G   +LG
Sbjct: 221 LDATYVDSRQT-----PVEDVPDVY-EQMDFIYEATGFPKHAIQSVQALAPN-GVGALLG 273

Query: 305 VDQPGS---QLSLSSFEVLHSGKILMGSLF 331
           V    +          E++   K L+GS+ 
Sbjct: 274 VPSDWAFEVDAGAFHREMVLHNKALVGSVN 303

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  145 bits (369), Expect = 7e-41
 Identities = 86/327 (26%), Positives = 130/327 (39%), Gaps = 47/327 (14%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPA--VFPRILG 75
           +AA+  A G PL IDEV V  P   +V+V+I  + +CH+D+      D+P     P I G
Sbjct: 4   KAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAAD-GDWPVKPTLPFIPG 62

Query: 76  HEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           HE +G V +VG  V  V EGD V +P   + C  C  C      LC            + 
Sbjct: 63  HEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLC-----------EKQ 111

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVSTGVGAA 193
           Q +      G +++       + EY V D  +V  +   V       + C GV+      
Sbjct: 112 QNT------GYSVN-----GGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTV--YKG 158

Query: 194 WRTANVEVGSTVVIFGLGSIG-----LAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 248
            +  +   G  VVI G+G +G      A A G       R+  VD+   K  + +R G  
Sbjct: 159 LKVTDTRPGQWVVISGIGGLGHVAVQYARAMGL------RVAAVDIDDAKLNLARRLGAE 212

Query: 249 EFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 308
             VN++   D   +  +     GGA              +A    R+G G   + G+  P
Sbjct: 213 VAVNAR---DTDPAAWLQKEI-GGAHGVLVTAVSPKAFSQAIGMVRRG-GTIALNGL--P 265

Query: 309 GSQLSLSSFEVLHSGKILMGSLFGGLK 335
                   F+V+  G  + GS+ G   
Sbjct: 266 PGDFGTPIFDVVLKGITIRGSIVGTRS 292

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  146 bits (369), Expect = 1e-40
 Identities = 61/333 (18%), Positives = 107/333 (32%), Gaps = 50/333 (15%)

Query: 18  RAAIATAPGEPLVIDEV-IVDPPNSHEVRVRIICTSLCHSDV-----TFWKMKDFPAVFP 71
           +A I   P   + + +V      +  ++++R I   +C +D                   
Sbjct: 2   KAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDF 61

Query: 72  RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM 131
            +LGHEAIGVVE   E+  G  +GD+V+P     C  C  C   + + C    F  +   
Sbjct: 62  LVLGHEAIGVVE---ESYHGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIH 118

Query: 132 PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL--LSCGV--- 186
             D         G             E+   D  ++VK+  ++         L+      
Sbjct: 119 KMD---------G----------FMREWWYDDPKYLVKIPKSIEDIGILAQPLADIEKSI 159

Query: 187 ------STGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE 240
                    V              V++ G G IG+      R  G    +       + E
Sbjct: 160 EEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVE 219

Query: 241 IGKRFGVT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL-ASLVQEAYACCRKGWG 298
                     + NS N  DK      +  + G  D   +  G   +++        +  G
Sbjct: 220 QTVIEETKTNYYNSSNGYDK------LKDSVGKFDVIIDATGADVNILGNVIPLLGRN-G 272

Query: 299 KTIVLGVDQPGSQ--LSLSSFEVLHSGKILMGS 329
              + G    GS      +  E++H+ K ++G 
Sbjct: 273 VLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIGL 305

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  144 bits (365), Expect = 3e-40
 Identities = 76/332 (22%), Positives = 125/332 (37%), Gaps = 45/332 (13%)

Query: 14  PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP--AVFP 71
           P   +  I       L   ++ V  P ++E+ + +  + +CH+D+  W   D+P     P
Sbjct: 3   PETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWH-GDWPLPVKLP 61

Query: 72  RILGHEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
            + GHE  GVV  +GENV G   GD   I      C  C  C     + C          
Sbjct: 62  LVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNC---------- 111

Query: 131 MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVSTG 189
            P    S      G T        SF +Y   D      +       +   + C G++  
Sbjct: 112 -PHADLS------GYTHD-----GSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITV- 158

Query: 190 VGAAWRTANVEVGSTVVIF----GLGSIG--LAVAEGARLCGATRIIGVDVISEKFEIGK 243
              A ++AN+  G  V I     GLGS+    A A G       R++G+D    K E+ +
Sbjct: 159 -YKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGY------RVLGIDGGEGKEELFR 211

Query: 244 RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 303
             G   F++     D  +   ++  TDGGA          + ++ +    R   G T+++
Sbjct: 212 SIGGEVFIDFTKEKD--IVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRAN-GTTVLV 268

Query: 304 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 335
           G+   G++     F  +     ++GS  G   
Sbjct: 269 GMP-AGAKCCSDVFNQVVKSISIVGSYVGNRA 299

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  142 bits (360), Expect = 1e-39
 Identities = 86/327 (26%), Positives = 137/327 (41%), Gaps = 47/327 (14%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP--AVFPRILG 75
           +AA+     EPL I EV     +  EV VRI    +CH+D+      D+P     P I G
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH-GDWPVKPKLPLIPG 60

Query: 76  HEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           HE +G+VE VG  V  +  GD V IP   + C  C  C S +  LC              
Sbjct: 61  HEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLC-----------EHQ 109

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVSTGVGAA 193
           + +      G ++        ++EY      +VVK+   +    A  + C GV+T    A
Sbjct: 110 KNA------GYSVD-----GGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTT--YKA 156

Query: 194 WRTANVEVGSTVVIFGLGSIG-----LAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 248
            +    + G  V I+G+G +G      A A G        ++ VD+  EK E+ K  G  
Sbjct: 157 LKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL------NVVAVDIGDEKLELAKELGAD 210

Query: 249 EFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 308
             VN      +  ++ + +   GG              Q AY   R+G G  +++G+  P
Sbjct: 211 LVVNPL---KEDAAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGL--P 263

Query: 309 GSQLSLSSFEVLHSGKILMGSLFGGLK 335
             ++ +  F+ + +G  ++GS+ G  K
Sbjct: 264 PEEMPIPIFDTVLNGIKIIGSIVGTRK 290

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score =  133 bits (336), Expect = 1e-35
 Identities = 71/320 (22%), Positives = 112/320 (35%), Gaps = 44/320 (13%)

Query: 37  DPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96
                H V ++++ T++C SD    +     A    +LGHE  G V   G +V+ +  GD
Sbjct: 29  GKKIEHGVILKVVSTNICGSDQHMVR-GRTTAQVGLVLGHEITGEVIEKGRDVENLQIGD 87

Query: 97  -VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVS- 154
            V +P F   C  C  C+     +C                +R     G         + 
Sbjct: 88  LVSVP-FNVACGRCRSCKEMHTGVCL-----------TVNPARAGGAYGYV--DMGDWTG 133

Query: 155 SFSEYTVLDIAHV--VKVDPTVPPNRAC----LLSCGVSTGVGAAWRTANVEVGSTVVIF 208
             +EY ++  A    +K+               LS  + TG   A  TA V  GSTV + 
Sbjct: 134 GQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGA-VTAGVGPGSTVYVA 192

Query: 209 GLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM 268
           G G +GLA A  ARL GA  +I  D+   +    K  G      S    D  + + I  +
Sbjct: 193 GAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSL---DTPLHEQIAAL 249

Query: 269 TDG-GADYCFECVGL---------------ASLVQEAYACCRKGWGKTIVLGVDQPGSQL 312
                 D   + VG                A+++       R   GK  + G+       
Sbjct: 250 LGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPGLYVTEDPG 308

Query: 313 SLSSFEVLHSGKILMGSLFG 332
           ++ +   + S  I  G  + 
Sbjct: 309 AVDAAAKIGSLSIRFGLGWA 328

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score =  130 bits (328), Expect = 2e-34
 Identities = 67/343 (19%), Positives = 119/343 (34%), Gaps = 49/343 (14%)

Query: 18  RAAIATAPGEPLVIDEV----IVDP--PNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFP 71
           ++ +     + L ++ V    +        H V ++++ T++C SD   ++   F     
Sbjct: 4   KSVVYHGTRD-LRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYR-GRFIVPKG 61

Query: 72  RILGHEAIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
            +LGHE  G V   G +V+ +  GD V +P F   C  C  C+  + ++C       +  
Sbjct: 62  HVLGHEITGEVVEKGSDVELMDIGDLVSVP-FNVACGRCRNCKEARSDVCEN-----NLV 115

Query: 131 MPRDQTSRFKDLRGETIHHF-------VSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLS 183
            P      F    G  +  +       V V  +++Y +L      K           L+S
Sbjct: 116 NPDADLGAF----GFDLKGWSGGQAEYVLVP-YADYMLLKFGD--KEQAMEKIKDLTLIS 168

Query: 184 CGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243
             + TG      +A V+ GS V I G G +G   A GARL GA  +I  D   E+ ++  
Sbjct: 169 DILPTGFHGC-VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLS 227

Query: 244 RFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGL--------------ASLVQE 288
             G              +   I  +      D   + VG                  +  
Sbjct: 228 DAGFETIDLRN---SAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNS 284

Query: 289 AYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331
            +   R G G   + G+        ++         +  G ++
Sbjct: 285 LFDVVRAG-GAIGIPGIYVGSDPDPVNKDAGSGRLHLDFGKMW 326

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  104 bits (263), Expect = 9e-26
 Identities = 82/329 (24%), Positives = 127/329 (38%), Gaps = 52/329 (15%)

Query: 18  RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDFPAVFPRIL 74
           RA +  A G P  L + ++ V  P   EVRVR+   +L H DV   K +       P +L
Sbjct: 2   RAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVL 61

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
           G +  GVV++VG  V+G   GD V+ +    C  C  C + + NLC  +           
Sbjct: 62  GADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRY----------- 110

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194
                  + GE  H      +++EY VL  A++      +    A  +     T    AW
Sbjct: 111 ------QILGEHRH-----GTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLT----AW 155

Query: 195 R----TANVEVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVI-----SEKFEIGKR 244
           +       V  G  V++   GS + +A  + A+L GA       VI      +K    K 
Sbjct: 156 QMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGAR------VIATAGSEDKLRRAKA 209

Query: 245 FGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL 303
            G  E VN          + +  +T G GAD   +  G A   +        G G+  + 
Sbjct: 210 LGADETVNYT---HPDWPKEVRRLTGGKGADKVVDHTG-ALYFEGVIKATANG-GRIAIA 264

Query: 304 GVDQPGSQLSLSSFEVLHSGKILMGSLFG 332
           G    G + +L    V +    ++GS   
Sbjct: 265 GA-SSGYEGTLPFAHVFYRQLSILGSTMA 292

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score = 99.2 bits (248), Expect = 1e-23
 Identities = 68/325 (20%), Positives = 110/325 (33%), Gaps = 52/325 (16%)

Query: 20  AIATAPG--EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD---FPAVFPRIL 74
             +T       L + E  V     H++ VR +  SL + D     ++        FP + 
Sbjct: 30  EWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDK--LVLETGMGLDLAFPFVP 87

Query: 75  GHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
             +  GVVE+VG++V     GD VI  F     + +   + +                  
Sbjct: 88  ASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYET------LGGAHP 141

Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194
                                 SEY VL     V    ++    A  L C   T    AW
Sbjct: 142 GV-------------------LSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLT----AW 178

Query: 195 R----TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRII--GVDVISEKFEIGKRFGVT 248
                  ++  G  VV+ G G + L   + A+  GA  I+        EK +     G  
Sbjct: 179 FALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSR---EKLDRAFALGAD 235

Query: 249 EFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 307
             +N     ++   + +  +T   GAD+  E  G A L Q +        G+  V+GV  
Sbjct: 236 HGINRL---EEDWVERVYALTGDRGADHILEIAGGAGLGQ-SLKAVAPD-GRISVIGV-L 289

Query: 308 PGSQLSLSSFEVLHSGKILMGSLFG 332
            G ++S     +L    ++ G   G
Sbjct: 290 EGFEVSGPVGPLLLKSPVVQGISVG 314

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score = 99.9 bits (249), Expect = 2e-23
 Identities = 65/366 (17%), Positives = 116/366 (31%), Gaps = 77/366 (21%)

Query: 12  GKPIQCRAAIATAPGEP---LVIDEVIVDPPNSHEVRVRIICTSLCHSDV---------- 58
               +  A + T   +P   + +D+V V      E  V ++ +S+ ++ V          
Sbjct: 38  KDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLST 97

Query: 59  --------TFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECV 110
                       +     +   ++G +  GVV   G  V+    GD V+ H L+   E  
Sbjct: 98  FGFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESS 157

Query: 111 GCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV 170
              +             +   P  +   F+   G            +E  ++    ++  
Sbjct: 158 DGHND------------TMLDPEQRIWGFETNFG----------GLAEIALVKSNQLMPK 195

Query: 171 DPTVPPNRACLLSCGVSTGVGAAWR------TANVEVGSTVVIFGLGS-IGLAVAEGARL 223
              +    A       ST    A+R       A ++ G  V+I+G    +G    + A  
Sbjct: 196 PDHLSWEEAAAPGLVNST----AYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALA 251

Query: 224 CGATRIIGVDVIS--EKFEIGKRFGVTEFVNSKNCGDKSVSQI--------------IID 267
            GA  I    V+S  +K EI +  G    ++    G +                   I +
Sbjct: 252 GGANPIC---VVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRE 308

Query: 268 MTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKIL 326
           +T G   D  FE  G  +    +    RKG G          G      +  +  S K +
Sbjct: 309 LTGGEDIDIVFEHPGRETFGA-SVFVTRKG-GTITTCAS-TSGYMHEYDNRYLWMSLKRI 365

Query: 327 MGSLFG 332
           +GS F 
Sbjct: 366 IGSHFA 371

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 95.9 bits (239), Expect = 2e-22
 Identities = 55/304 (18%), Positives = 92/304 (30%), Gaps = 64/304 (21%)

Query: 14  PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRI 73
           P Q  A       E  V +          +V VR+   ++  SD     M+   A     
Sbjct: 9   PPQQTALTVNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSD---TSMRGQFATPWAF 65

Query: 74  LGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR 133
           LG +  G V +VG +V  +  GD V                           ++ P  P 
Sbjct: 66  LGTDYAGTVVAVGSDVTHIQVGDRVY----------------------GAQNEMCPRTPD 103

Query: 134 DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVST----- 188
                                +FS+YTV       K+   +   +A  L  G+ST     
Sbjct: 104 Q-------------------GAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAM 144

Query: 189 ---GVGAAW----RTANVEVGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVDVISEK-F 239
              G+        +         V+++G   +      +  RL G   I      S   F
Sbjct: 145 KLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIA---TCSPHNF 201

Query: 240 EIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGK 299
           ++ K  G  E  + +     +++Q I   T     Y  +C+         +A   +  G 
Sbjct: 202 DLAKSRGAEEVFDYR---APNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGH 258

Query: 300 TIVL 303
            + L
Sbjct: 259 YVSL 262

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 93.4 bits (233), Expect = 2e-21
 Identities = 77/345 (22%), Positives = 121/345 (35%), Gaps = 68/345 (19%)

Query: 13  KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPR 72
            P++     A      L             +VR +++   +CHSD+   K     +++P 
Sbjct: 13  HPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPL 72

Query: 73  ILGHEAIGVVESVGENVDGVVEGDVVIPHFLAD-CTECVGCRSKKGNLCSAFPFKISPWM 131
           + GHE +G V  VG  V  V  GD V    L   C  C  C +   N C           
Sbjct: 73  VPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMIL------ 126

Query: 132 PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVST-- 188
               T       G   +       +S + V +  ++++    +P +    L C G++   
Sbjct: 127 ----TYASIYHDGTITY-----GGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYS 177

Query: 189 -----GVGAAWRTANVEVGSTVVIFGLGSIG-----LAVAEGARLCGATRIIGVDVISE- 237
                G+           G  + I GLG +G      A A G++         V VIS  
Sbjct: 178 PLKYFGLDEP--------GKHIGIVGLGGLGHVAVKFAKAFGSK---------VTVISTS 220

Query: 238 ---KFEIGKRFGVTEFVNSKNCGD-KSVSQ---IIIDMTDGGADYCFECVGLASLVQEAY 290
              K E  K FG   F+ S++    ++ +     IID                       
Sbjct: 221 PSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHPL------------LPL 268

Query: 291 ACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 335
               K  GK I++G   P   L L +F ++   KI+ GS  GG+K
Sbjct: 269 FGLLKSHGKLILVGA--PEKPLELPAFSLIAGRKIVAGSGIGGMK 311

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score = 93.7 bits (233), Expect = 3e-21
 Identities = 56/348 (16%), Positives = 104/348 (29%), Gaps = 70/348 (20%)

Query: 25  PGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDV------------------TFWKMKDF 66
             + L + EV +      EV V ++ +S+ ++ V                          
Sbjct: 46  VRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATR 105

Query: 67  PAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 126
                 +LG +  GVV   G  V     GD VI H      E        G L       
Sbjct: 106 HDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVD-EQEPATHGDGMLG------ 158

Query: 127 ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 186
                     +  +    ET          +EY V+  + ++     +    A +     
Sbjct: 159 ----------TEQRAWGFETNF-----GGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCA 203

Query: 187 STGVGAAWR------TANVEVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKF 239
            T    A+R       A ++ G  V+I+G    +G    +  +  G    + V   ++K 
Sbjct: 204 GT----AYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKE 258

Query: 240 EIGKRFGVTEFVNSKNCGD---------------KSVSQIIIDMTDGGADYCFECVGLAS 284
              +  G    +N    G                + +++++++      D  FE  G  +
Sbjct: 259 AAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVT 318

Query: 285 LVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332
                    R G   T+V      G   +  +  +    K ++GS   
Sbjct: 319 FGLSVIVARRGG---TVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGA 363

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 90.0 bits (224), Expect = 2e-20
 Identities = 73/345 (21%), Positives = 119/345 (34%), Gaps = 68/345 (19%)

Query: 13  KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPR 72
              +     A  P   L      +      +V +RIIC  +CH+D+   K     + +P 
Sbjct: 6   AERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPM 65

Query: 73  ILGHEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKISPWM 131
           + GHE +G V  VG +V     GD+V +   +  C  C  C       C    +      
Sbjct: 66  VPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIW------ 119

Query: 132 PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVST-- 188
               +     + G+          F++ TV+    VVK+   +   +A  L C GV+   
Sbjct: 120 ----SYNDVYINGQPTQ-----GGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYS 170

Query: 189 -----GVGAAWRTANVEVGSTVVIFGLGSIG-----LAVAEGARLCGATRIIGVDVISE- 237
                G+           G    I GLG +G     +A A G           V VIS  
Sbjct: 171 PLSHFGLKQP--------GLRGGILGLGGVGHMGVKIAKAMGHH---------VTVISSS 213

Query: 238 ---KFEIGKRFGVTEFVNSKNCGD-KSVSQ---IIIDMTDGGADYCFECVGLASLVQEAY 290
              + E  +  G  ++V   +      ++     +ID                    E Y
Sbjct: 214 NKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHAL------------EPY 261

Query: 291 ACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 335
               K  GK I++GV    + L   +  ++   K++ GS  G +K
Sbjct: 262 LSLLKLDGKLILMGV--INNPLQFLTPLLMLGRKVITGSFIGSMK 304

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 90.4 bits (225), Expect = 2e-20
 Identities = 70/345 (20%), Positives = 126/345 (36%), Gaps = 61/345 (17%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
                ++ +A  A +  +PL   ++    P  ++V++ I    +CHSD+   + +    V
Sbjct: 16  YKKAGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTV 75

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKIS 128
           +P + GHE +G V +VG+ V+    GD+V +   +  C  C  C     N C        
Sbjct: 76  YPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTG--- 132

Query: 129 PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV-DPTVPPNRACLLSC-GV 186
                  T                   +S+  V+   +V+++  P         L C G+
Sbjct: 133 -------TYNSPTPDEPGHTL----GGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGI 181

Query: 187 STGVGAAW---RTANVEVGSTVVIFGLGSIG-----LAVAEGARLCGATRIIGVDVIS-- 236
           +T     +   R      G  V + G+G +G     LA A GA          V   +  
Sbjct: 182 TT-----YSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAH---------VVAFTTS 227

Query: 237 -EKFEIGKRFGVTEFVNSKNCGD-KSVSQ---IIIDMTDGGADYCFECVGLASLVQEAYA 291
             K E  K  G  E VNS+N  +  +  +    I++      +             + + 
Sbjct: 228 EAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNL------------DDFT 275

Query: 292 CCRKGWGKTIVLGVDQPGSQL-SLSSFEVLHSGKILMGSLFGGLK 335
              K  G   ++G   P +   S   F ++   + + GS+ GG+ 
Sbjct: 276 TLLKRDGTMTLVGA--PATPHKSPEVFNLIMKRRAIAGSMIGGIP 318

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score = 87.7 bits (218), Expect = 1e-19
 Identities = 46/277 (16%), Positives = 84/277 (30%), Gaps = 60/277 (21%)

Query: 14  PIQCRAAIATAPGEP---LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK-DFPAV 69
           P + RA +    G+P   + +  + +      +VRV+++   +  SD+   +        
Sbjct: 24  PARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPE 83

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P + G+E +  V +VG NV G+  GD VI              +  G            
Sbjct: 84  LPAVGGNEGVAQVVAVGSNVTGLKPGDWVI-----------PANAGLG------------ 120

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
                                    ++    V     +++V   +P   A  L     T 
Sbjct: 121 -------------------------TWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTA 155

Query: 190 VGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGV---DVISEKFEIGKRF 245
                    ++ G +V+       +G AV + A   G   I  V     I +  +  K  
Sbjct: 156 YRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSL 215

Query: 246 GVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVG 281
           G    +      +    ++     D         CVG
Sbjct: 216 GAEHVITE---EELRRPEMKNFFKDMPQPRLALNCVG 249

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 86.9 bits (216), Expect = 3e-19
 Identities = 73/336 (21%), Positives = 120/336 (35%), Gaps = 54/336 (16%)

Query: 14  PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRI 73
            +Q +     +  E     +         +V + I+   +CHSD+     +    ++P I
Sbjct: 2   RVQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMI 61

Query: 74  LGHEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
            GHE  G+++ VG+ V     GDVV +  F+  C  C  C+  +   C+   F       
Sbjct: 62  PGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYD---- 117

Query: 133 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVSTGVG 191
                       E          +S   V+D  +V+ VD   P  +   L C G++T   
Sbjct: 118 ----CLDSFHDNEPHM-----GGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITT--- 165

Query: 192 AAW---RTANVEVGSTVVIFGLGSIG-----LAVAEGARLCGATRIIGVDVIS---EKFE 240
             +   + + V  G+ V + G G +G      AVA GA          V V +    K +
Sbjct: 166 --YSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGAE---------VSVFARNEHKKQ 214

Query: 241 IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKT 300
                GV  F        + +   II       D             + Y       G  
Sbjct: 215 DALSMGVKHFYTDPKQCKEELD-FIISTIPTHYDL------------KDYLKLLTYNGDL 261

Query: 301 IVLGVDQPGSQLSLSSFEVLHSG-KILMGSLFGGLK 335
            ++G+        LS F+ +H G + + GSL GG+K
Sbjct: 262 ALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIK 297

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 85.9 bits (213), Expect = 6e-19
 Identities = 49/325 (15%), Positives = 83/325 (25%), Gaps = 86/325 (26%)

Query: 15  IQCRAAIATAPGEP-----LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF--------- 60
           I  +A + T  GEP         E+  D    +EV V+ + + +  SD+           
Sbjct: 2   ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKP 61

Query: 61  -WKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNL 119
                          G+E +  V  VG NV  +  GD VIP  +   T            
Sbjct: 62  AKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGT------------ 109

Query: 120 CSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD-------- 171
                                               +  + + +    +K+         
Sbjct: 110 ------------------------------------WRTHALGNDDDFIKLPNPAQSKAN 133

Query: 172 ---PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF--GLGSIGLAVAEGARLCGA 226
                +  N+   +S    T          +  G    I   G  ++G   ++  +L   
Sbjct: 134 GKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF 193

Query: 227 TRIIGV----DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTD---GGADYCFEC 279
              I V      + E     K  G T+ +       +     I +      G A     C
Sbjct: 194 -NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNC 252

Query: 280 VGLASLVQEAYACCRKGWGKTIVLG 304
           VG                G  +  G
Sbjct: 253 VG-GKSSTGIARKLNNN-GLMLTYG 275

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 82.2 bits (204), Expect = 1e-17
 Identities = 67/340 (19%), Positives = 108/340 (31%), Gaps = 68/340 (20%)

Query: 19  AAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF----WKMKDFPAVFPRIL 74
           A  +    +     +    P   H++ ++I    +C SD+      W     P V     
Sbjct: 11  AIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLV-V--- 66

Query: 75  GHEAIGVVESVGENVD-GVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
           GHE +G V  +G   + G+  G  V +   +  C EC  C++     C+ F         
Sbjct: 67  GHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVT------- 119

Query: 133 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVSTGVG 191
              T       G      VS   ++ Y  +    VV +   +P + A  L C G++    
Sbjct: 120 ---TYSQPYEDGY-----VSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTV--- 168

Query: 192 AAW---RTANVEVGSTVVIFGLGSIG-----LAVAEGARLCGATRIIGVDVIS---EKFE 240
             +          G  V I GLG IG     ++ A GA            VIS    K E
Sbjct: 169 --YSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGAE---------TYVISRSSRKRE 217

Query: 241 IGKRFGVTEFVNSKNCGDKSVSQ-----IIIDMTDGGADYCFECVGLASLVQEAYACCRK 295
              + G   ++ +   GD          +I+       D  F                 K
Sbjct: 218 DAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDF----------NIMPKAMK 267

Query: 296 GWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 335
             G+ + + +  P     LS          +  S  G +K
Sbjct: 268 VGGRIVSISI--PEQHEMLSLKPYGLKAVSISYSALGSIK 305

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 75.3 bits (186), Expect = 2e-15
 Identities = 48/292 (16%), Positives = 96/292 (32%), Gaps = 62/292 (21%)

Query: 18  RAAIATAPGEP---LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDFPAVFPRI 73
           +       G P   L ++   ++P   +EV VR++   +  SD+             P I
Sbjct: 6   KLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNI 65

Query: 74  LGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR 133
            G+E +G+VE+VG  V   + G  V+P                                 
Sbjct: 66  PGYEGVGIVENVGAFVSRELIGKRVLP--------------------------------- 92

Query: 134 DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAA 193
                                ++ EY       VV +  ++    A  +     T     
Sbjct: 93  ----------------LRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTC 136

Query: 194 WRTANVEVGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252
             T N++    +++     +IG   A+ +++    R+I V   ++  E   R G    ++
Sbjct: 137 TETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAAYVID 195

Query: 253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL 303
           +       + + ++++T+G GAD   + +G      E     R       + 
Sbjct: 196 TS---TAPLYETVMELTNGIGADAAIDSIG-GPDGNELAFSLR--PNGHFLT 241

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 67.6 bits (166), Expect = 8e-13
 Identities = 42/281 (14%), Positives = 83/281 (29%), Gaps = 74/281 (26%)

Query: 18  RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF----WKMKDFPAVFP 71
                   G P  L   E     P  +E++V      +   D       +     P+   
Sbjct: 3   TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPS--- 59

Query: 72  RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM 131
             LG EA G+V  VG  V  +  GD V           +G                    
Sbjct: 60  -GLGTEAAGIVSKVGSGVKHIKAGDRV-----VYAQSALG-------------------- 93

Query: 132 PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRA--CLLSCGVSTG 189
                                  ++S    +       +   +   +A    L      G
Sbjct: 94  -----------------------AYSSVHNIIADKAAILPAAISFEQAAASFLK-----G 125

Query: 190 VGA---AWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245
           +       +T  ++     +     G +GL   + A+  GA  +IG    ++K +   + 
Sbjct: 126 LTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAK-LIGTVGTAQKAQSALKA 184

Query: 246 GVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASL 285
           G  + +N +   ++ + + + ++T G      ++ VG  + 
Sbjct: 185 GAWQVINYR---EEDLVERLKEITGGKKVRVVYDSVGRDTW 222

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 67.3 bits (165), Expect = 1e-12
 Identities = 57/277 (20%), Positives = 95/277 (34%), Gaps = 61/277 (22%)

Query: 18  RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF---WKMKDFPAVFPR 72
            AA+    G P   V +EV V  P   +VR+R     +   D                P 
Sbjct: 3   MAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPI 62

Query: 73  ILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
           ++G EA  VVE VG  V     G+ V       C   +G                     
Sbjct: 63  VVGFEAAAVVEEVGPGVTDFTVGERV-----CTCLPPLG--------------------- 96

Query: 133 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS--TGV 190
                                 ++S+  +     ++KV   +  +   L    +   T  
Sbjct: 97  ----------------------AYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQ 134

Query: 191 GAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
               +T  V+ G  V+I    G +G  +   AR  GAT +IG     EK E  ++ G   
Sbjct: 135 YLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGAT-VIGTVSTEEKAETARKLGCHH 193

Query: 250 FVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASL 285
            +N      +  ++++ ++T G G D  ++ +G  +L
Sbjct: 194 TINYS---TQDFAEVVREITGGKGVDVVYDSIGKDTL 227

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 66.8 bits (164), Expect = 1e-12
 Identities = 58/288 (20%), Positives = 94/288 (32%), Gaps = 88/288 (30%)

Query: 18  RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF----WKMKDFPAVFP 71
           +    +  G P  L   +   + P    V VR     L   D  +    +     P+   
Sbjct: 3   KRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPS--- 59

Query: 72  RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM 131
             LG E  GVVE+VG+ V     GD V     A  T  +G                    
Sbjct: 60  -GLGAEGAGVVEAVGDEVTRFKVGDRV-----AYGTGPLG-------------------- 93

Query: 132 PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVG 191
                                  ++SE  VL  A++VK+      +        VS    
Sbjct: 94  -----------------------AYSEVHVLPEANLVKL-----AD-------SVSFEQA 118

Query: 192 AAW------------RTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK 238
           AA             +T  V+ G  ++     G +G    + A+  GA  +IG     EK
Sbjct: 119 AALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAK-LIGTVSSPEK 177

Query: 239 FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASL 285
               K  G  E ++      + V++ ++++TDG      ++ VG  + 
Sbjct: 178 AAHAKALGAWETIDYS---HEDVAKRVLELTDGKKCPVVYDGVGQDTW 222

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 66.5 bits (162), Expect = 3e-12
 Identities = 43/324 (13%), Positives = 85/324 (26%), Gaps = 93/324 (28%)

Query: 13  KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF------------ 60
             +Q R+ I ++    L +D +    P   EV +RI  + L  SD+              
Sbjct: 4   SALQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKA 63

Query: 61  -----------------WKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFL 103
                             +           +G+E  GVV   G +          +    
Sbjct: 64  SGTAERPIVTARVPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTV---- 119

Query: 104 ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLD 163
                                                          +  + +S+Y  + 
Sbjct: 120 ---------------------------------------------AAIGGAMYSQYRCIP 134

Query: 164 IAHVVKVDPTVPPNR-ACLLSCGVSTGVGAAW---RTANVEVGSTVVIFGLGS-IGLAVA 218
               + +     P   A      ++     A     T  +E  S +V     S +G  + 
Sbjct: 135 ADQCLVLPEGATPADGASSFVNPLT-----ALGMVETMRLEGHSALVHTAAASNLGQMLN 189

Query: 219 EGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCF 277
           +     G  +++ +    E+ ++ K  G     N+      +  Q + +     GA   F
Sbjct: 190 QICLKDGI-KLVNIVRKQEQADLLKAQGAVHVCNA---ASPTFMQDLTEALVSTGATIAF 245

Query: 278 ECVGLASLVQEAYACCRKGWGKTI 301
           +  G   L  +   C      K+ 
Sbjct: 246 DATGGGKLGGQILTCMEAALNKSA 269

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 65.7 bits (161), Expect = 3e-12
 Identities = 52/272 (19%), Positives = 100/272 (36%), Gaps = 63/272 (23%)

Query: 18  RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILG 75
           +  +    G    +  ++  V   +  E+ ++   T + + +  F K   +P   P +LG
Sbjct: 10  KVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGI-YPCEKPYVLG 68

Query: 76  HEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ 135
            EA G V + G+ V     GD V                                     
Sbjct: 69  REASGTVVAKGKGVTNFEVGDQVA------------------------------------ 92

Query: 136 TSRFKDLRGETIHHFVSVSSFSEYT-VLDIAHVVKVDPTVPPNRACLLSCGVSTGVGA-- 192
                         ++S S+F++Y+ +     V+K+          L + G+   + A  
Sbjct: 93  --------------YISNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALS 138

Query: 193 -AWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250
                 +V+ G  V++F   G +GL + +  ++ GA   I V    EK +I K +G    
Sbjct: 139 FTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAH-TIAVASTDEKLKIAKEYGAEYL 197

Query: 251 VNSKNCGDKSVSQIIIDMTDG-GADYCFECVG 281
           +N+     + + + ++  T+G G D  F+ VG
Sbjct: 198 INAS---KEDILRQVLKFTNGKGVDASFDSVG 226

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 62.2 bits (152), Expect = 4e-11
 Identities = 39/251 (15%), Positives = 72/251 (28%), Gaps = 72/251 (28%)

Query: 18  RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDV-----TFWKMKDFPAVF 70
           +A      G P  L + +        +++ +++   SL   D      + +  K      
Sbjct: 8   KAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNL 67

Query: 71  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
           P  LG++  G V  +G +V+ V  GD V+                               
Sbjct: 68  PSGLGYDFSGEVIELGSDVNNVNIGDKVM----------------------GIA------ 99

Query: 131 MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGV 190
                   F D              ++EY       +++    +   +A      + T  
Sbjct: 100 -------GFPDHPC----------CYAEYVCASPDTIIQKLEKLSFLQA----ASLPTAG 138

Query: 191 GAAW---RTANVEVGSTVVIF----GLGSIG--LAVAEGARLCGATRIIGVDVISEKFEI 241
             A      A V+ G  V+I     G+G +   LA  +G  +                  
Sbjct: 139 LTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTAS-------KRNHAF 191

Query: 242 GKRFGVTEFVN 252
            K  G  + +N
Sbjct: 192 LKALGAEQCIN 202

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 61.9 bits (151), Expect = 6e-11
 Identities = 48/290 (16%), Positives = 85/290 (29%), Gaps = 71/290 (24%)

Query: 1   MDIEKPSNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF 60
           +  E    ++  + +              +  +  V  P   ++ VR     +  SD+ +
Sbjct: 13  LGTENLYFQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINY 72

Query: 61  WKMKD---FPAVFPRILGHEAIGVVESVGENVDG-VVEGDVVIPHFLADCTECVGCRSKK 116
                        P  +G E IG V ++G +       G  V                  
Sbjct: 73  --SAGRYDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVA----------------- 113

Query: 117 GNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176
                                            +++  SF+EYTV+  +    V P+V P
Sbjct: 114 ---------------------------------YMAPGSFAEYTVVPASIATPV-PSVKP 139

Query: 177 NRACLLSCGVSTGVGAAW----RTANVEVGSTVVIFG-LGSIGLAVAEGARLCGATRIIG 231
               LL  G +     A+        +  G  V++    G  G    + ++      +IG
Sbjct: 140 EYLTLLVSGTT-----AYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIG 193

Query: 232 VDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 281
                EK    K  G    +N K    + V  ++      G D  +E VG
Sbjct: 194 TCSSDEKSAFLKSLGCDRPINYK---TEPVGTVLKQEYPEGVDVVYESVG 240

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 61.8 bits (151), Expect = 7e-11
 Identities = 54/304 (17%), Positives = 95/304 (31%), Gaps = 62/304 (20%)

Query: 6   PSNKTAGKPIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKM 63
                   P   +A  A +   P  LV  +V       + V V +    +C  D    K 
Sbjct: 11  TLEAQTQGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKG 70

Query: 64  K-DFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSA 122
           +       P + G E  GVV S           +                          
Sbjct: 71  EYQLKMEPPFVPGIETAGVVRSA---------PEGS------------------------ 97

Query: 123 FPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLL 182
              K                 G+ +  F  +  ++E   +  ++++   P +    A  L
Sbjct: 98  -GIKP----------------GDRVMAFNFIGGYAERVAVAPSNILPTPPQLDDAEAVAL 140

Query: 183 SCGVSTGVGAAWRTANVEVGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVDVISEKFEI 241
                T   A  R   +  G TV++ G  G IG A  + A+  GA ++I V   +   E 
Sbjct: 141 IANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEF 199

Query: 242 GKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKT 300
            K  G    +      ++  ++ + + T G G D   + +G      +A        G+ 
Sbjct: 200 VKSVGADIVLPL----EEGWAKAVREATGGAGVDMVVDPIG-GPAFDDAVRTLASE-GRL 253

Query: 301 IVLG 304
           +V+G
Sbjct: 254 LVVG 257

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 60.7 bits (148), Expect = 1e-10
 Identities = 56/301 (18%), Positives = 98/301 (32%), Gaps = 60/301 (19%)

Query: 11  AGKPIQCRAAIATAPGEP--LVIDEVIVDP-PNSHEVRVRIICTSLCHSDVTFWKMK-DF 66
           A      RA      G P  L +   I  P P  H+V +++    +   +          
Sbjct: 24  ATGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR 83

Query: 67  PAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 126
             + P   G +  GV+E+VG+N     +GD V        +  +      G         
Sbjct: 84  KPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVF------TSSTIS-----G--------- 123

Query: 127 ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 186
                                        ++EY +     V K+   +   +   +    
Sbjct: 124 ----------------------------GYAEYALAADHTVYKLPEKLDFKQGAAIGIPY 155

Query: 187 STGVGAAWRTANVEVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245
            T   A   +A V+ G +V++ G    +GLA  + AR  G  +I+G     E  +I  + 
Sbjct: 156 FTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQN 214

Query: 246 GVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 304
           G  E  N +   + +    I       G D   E +     + +  +    G G+ IV+G
Sbjct: 215 GAHEVFNHR---EVNYIDKIKKYVGEKGIDIIIEMLA-NVNLSKDLSLLSHG-GRVIVVG 269

Query: 305 V 305
            
Sbjct: 270 S 270

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 59.9 bits (146), Expect = 3e-10
 Identities = 64/347 (18%), Positives = 110/347 (31%), Gaps = 91/347 (26%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-----MKDFPAVFPR 72
            AA+      P V+ ++    P   +V V+I  +     D    K             P 
Sbjct: 9   IAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLD---AKIRAGEAPHAQQPLPA 65

Query: 73  ILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
           ILG +  G V +VG  VD    GD V            G                     
Sbjct: 66  ILGMDLAGTVVAVGPEVDSFRVGDAVF-----------GL-------------------- 94

Query: 133 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLS----CGVST 188
              T     L+G          + +++  +D   +       P      L+      +  
Sbjct: 95  ---TGGVGGLQG----------THAQFAAVDARLLAS----KPAA----LTMRQASVLPL 133

Query: 189 GVGAAW----RTANVEVGSTVVIF----GLGS--IGLAVAEGARLCGATRIIGVDVISEK 238
               AW      A V+ G TV+I     G+G   I +A+A GAR+    R          
Sbjct: 134 VFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATAR-------GSD 186

Query: 239 FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGW 297
            E  +  G T          +       + T G G D  ++ +G   ++  +++  ++  
Sbjct: 187 LEYVRDLGATPIDA-----SREPEDYAAEHTAGQGFDLVYDTLG-GPVLDASFSAVKRF- 239

Query: 298 GKTIVLGVDQPGSQLSLSSF-EVLHSGKILMGSLFGGLKAKSDIPIL 343
           G  +V  +     +L+  SF +  +SG   + +L           +L
Sbjct: 240 GH-VVSCLGWGTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEML 285

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 55.7 bits (135), Expect = 5e-09
 Identities = 15/84 (17%), Positives = 28/84 (33%), Gaps = 3/84 (3%)

Query: 18 RAAIATAPG---EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL 74
                A       + ++ V +    + ++ V+     +   D  F K          + 
Sbjct: 3  EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVP 62

Query: 75 GHEAIGVVESVGENVDGVVEGDVV 98
          G +  GV+  VG  VD  + G  V
Sbjct: 63 GVDGAGVIVKVGAKVDSKMLGRRV 86

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 53.0 bits (128), Expect = 5e-08
 Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 9/87 (10%)

Query: 18 RAAIATAPG-----EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD-FPAVFP 71
          +A     P             + +  P  HE+ V+I   S+   D    K +    +  P
Sbjct: 4  KAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVD---TKQRLMDVSKAP 60

Query: 72 RILGHEAIGVVESVGENVDGVVEGDVV 98
          R+LG +AIGVVESVG  V    +GD+V
Sbjct: 61 RVLGFDAIGVVESVGNEVTMFNQGDIV 87

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 5/86 (5%)

Query: 18  RAAIATAPG-----EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPR 72
           +A     P        L+  E+    P  H++ V +   S+   D    +         +
Sbjct: 24  KAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWK 83

Query: 73  ILGHEAIGVVESVGENVDGVVEGDVV 98
           ++G++A G+V +VG +V     GD V
Sbjct: 84  VIGYDAAGIVSAVGPDVTLFRPGDEV 109

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 50.5 bits (121), Expect = 3e-07
 Identities = 23/103 (22%), Positives = 34/103 (33%), Gaps = 25/103 (24%)

Query: 18  RAAIATAPGEP--LVIDEVIVDP--PNSHEVRVRIICTSLCHSDVTFWKM---------- 63
            A +    G+   L   + ++ P     +EV V++   S+   D     M          
Sbjct: 23  MAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPID---VNMRSGYGATALN 79

Query: 64  --------KDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVV 98
                   K     FP  LG +  GVV   G +V     GD V
Sbjct: 80  MKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEV 122

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 49.9 bits (120), Expect = 5e-07
 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 11/89 (12%)

Query: 18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK-----DFPAVF 70
          RA +    G    L +    +  P   E+++R+    L   D+    M      D P   
Sbjct: 5  RAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDL----MVRQGNIDNPPKT 60

Query: 71 PRILGHEAIGVVESVGENVDGVVEGDVVI 99
          P + G E  G+VE++G++V G   GD V+
Sbjct: 61 PLVPGFECSGIVEALGDSVKGYEIGDRVM 89

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 27/151 (17%), Positives = 53/151 (35%), Gaps = 9/151 (5%)

Query: 156 FSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGS-IG 214
           ++E     +  V K+   +  + A        T     +  AN+  G +V++   G  +G
Sbjct: 97  WAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVG 156

Query: 215 LAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGAD 274
            AVA+         + G    + K E  K   VT   +     +    Q +  ++  G D
Sbjct: 157 QAVAQLCSTVPNVTVFGT-ASTFKHEAIKD-SVTHLFDR----NADYVQEVKRISAEGVD 210

Query: 275 YCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
              +C+       +  +  +   G  I+ G 
Sbjct: 211 IVLDCLC-GDNTGKGLSLLKPL-GTYILYGS 239

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 23/85 (27%), Positives = 31/85 (36%), Gaps = 3/85 (3%)

Query: 18  RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK-DFPAVFPRIL 74
           R     + G P  +VI +  +      EV VR     +   D+   +     P     IL
Sbjct: 30  RFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPIL 89

Query: 75  GHEAIGVVESVGENVDGVVEGDVVI 99
           G E  G +  VG  V G   GD V 
Sbjct: 90  GLELSGEIVGVGPGVSGYAVGDKVC 114

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.3 bits (114), Expect = 3e-06
 Identities = 37/257 (14%), Positives = 68/257 (26%), Gaps = 99/257 (38%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           ++ ++        ID +I+            +          FW +              
Sbjct: 43  KSILSKE-----EIDHIIMSKDA--VSGTLRL----------FWTLLSKQE--------- 76

Query: 78  AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTS 137
                E V + V+ V+  +     FL                    P K     P   T 
Sbjct: 77  -----EMVQKFVEEVLRINY---KFLMS------------------PIKTEQRQPSMMTR 110

Query: 138 RFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA 197
            + + R      +     F++Y V  +   +K+       R  LL               
Sbjct: 111 MYIEQRDRL---YNDNQVFAKYNVSRLQPYLKL-------RQALL--------------- 145

Query: 198 NVEVGSTVVIFGLGSIG---LAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNS 253
            +     V+I G+   G   +A  +                S K +    F +  F +N 
Sbjct: 146 ELRPAKNVLIDGVLGSGKTWVA-LDVCL-------------SYKVQCKMDFKI--FWLNL 189

Query: 254 KNCGDKSVSQIIIDMTD 270
           KNC   S   ++  +  
Sbjct: 190 KNC--NSPETVLEMLQK 204

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score = 45.3 bits (108), Expect = 1e-05
 Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 2/93 (2%)

Query: 9   KTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK-DFP 67
              G       +   A    L    + V  P   +V +++   S+  SDV F K +   P
Sbjct: 17  VGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQP 76

Query: 68  AVFPRILGHEAIGVVESVGENVDGVVE-GDVVI 99
            V  R  G E +G + + G+        G  V 
Sbjct: 77  RVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVA 109

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 29  LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGEN 88
           LV +     P    EVR+ +    +   D     +  +P      LG E  GVV   G  
Sbjct: 226 LVDEPTATAPLGDGEVRIAMRAAGVNFRDA-LIALGMYPG--VASLGSEGAGVVVETGPG 282

Query: 89  VDGVVEGDVVI 99
           V G+  GD V+
Sbjct: 283 VTGLAPGDRVM 293

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 4/85 (4%)

Query: 18  RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDFPAVFPRIL 74
            A     PG P  L + EV    P   EV +++  ++L  +D+   +   D P     IL
Sbjct: 24  LAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNIL 83

Query: 75  GHEAIGVVESVGENVDGVV-EGDVV 98
           G EA G V  +G    G    GD  
Sbjct: 84  GLEASGHVAELGPGCQGHWKIGDTA 108

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} Length = 324

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVD 233
           G  ++I+G G IG ++A  A   G   +IGV+
Sbjct: 137 GQQLLIYGTGQIGQSLAAKASALGM-HVIGVN 167

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	362
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.96
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.91
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	99.14
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.9
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.87
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.73
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.73
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.68
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.55
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.54
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	98.15
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	98.02
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.01
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.98
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.98
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.97
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.92
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.85
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.83
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	97.8
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.78
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.76
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.71
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.7
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.65
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.65
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.63
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.59
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.56
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	97.56
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.53
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.52
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.43
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.43
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.42
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.41
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.38
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.37
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.36
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.36
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.33
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.31
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.29
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.27
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.25
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.25
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.25
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	97.25
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.25
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.24
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.23
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.23
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.23
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.22
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.2
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.19
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.19
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	97.18
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	97.17
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.16
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.16
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.16
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.16
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	97.15
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.15
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.15
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.15
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	97.15
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	97.13
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	97.13
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.13
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.13
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.11
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	97.1
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.1
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.09
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.09
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.09
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.09
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.08
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.08
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.07
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.07
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	97.07
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.06
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.06
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.06
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.06
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.06
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.05
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	97.04
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.04
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	97.04
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	97.04
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	97.04
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	97.03
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	97.03
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	97.03
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.03
1spx_A	278	Short-chain reductase family member (5L265); paral	97.02
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.02
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	97.01
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	97.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	96.98
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	96.98
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	96.98
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	96.97
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.97
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	96.97
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	96.96
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.95
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	96.95
3cxt_A	291	Dehydrogenase with different specificities; rossma	96.94
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	96.94
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	96.94
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.93
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	96.93
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	96.93
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	96.93
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.92
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	96.92
1xhl_A	297	Short-chain dehydrogenase/reductase family member	96.92
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	96.91
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	96.91
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.91
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	96.91
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	96.9
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	96.9
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.9
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	96.9
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	96.9
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	96.9
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	96.89
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	96.89
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.88
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.88
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.87
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	96.87
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	96.87
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	96.87
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	96.86
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	96.85
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	96.85
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	96.84
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	96.84
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	96.84
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	96.84
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	96.83
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	96.83
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	96.83
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	96.83
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	96.82
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.82
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	96.82
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	96.82
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	96.82
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	96.81
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	96.81
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	96.81
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	96.81
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	96.81
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.8
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	96.8
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.8
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	96.79
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	96.79
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.78
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	96.78
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	96.78
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	96.78
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	96.77
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	96.76
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	96.75
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	96.75
1xq1_A	266	Putative tropinone reducatse; structural genomics,	96.75
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	96.75
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	96.74
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.73
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.73
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	96.73
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	96.73
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	96.72
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.72
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	96.72
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	96.72
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	96.71
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	96.71
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.71
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.71
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	96.71
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	96.7
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	96.69
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.69
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	96.69
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	96.68
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	96.66
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.66
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	96.65
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.65
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	96.64
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	96.64
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.64
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	96.64
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.64
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.64
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.63
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	96.62
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.61
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.61
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.6
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	96.6
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.6
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	96.6
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	96.59
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.59
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.58
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	96.58
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	96.58
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	96.58
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	96.56
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.52
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.52
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.5
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	96.5
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.5
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.49
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	96.48
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.47
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	96.45
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.45
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.45
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	96.45
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.44
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	96.43
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.43
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.42
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	96.41
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.4
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	96.39
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.38
4gqa_A	412	NAD binding oxidoreductase; structural genomics, P	96.38
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.37
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.37
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.36
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.35
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	96.33
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.32
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	96.31
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	96.31
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.3
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.29
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.28
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.28
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	96.27
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	96.27
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	96.27
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	96.26
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	96.25
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.25
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.25
4had_A	350	Probable oxidoreductase protein; structural genomi	96.24
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.24
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	96.24
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.22
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	96.21
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.21
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	96.19
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	96.19
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	96.19
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	96.18
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	96.17
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	96.17
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	96.17
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.17
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	96.16
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	96.16
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.16
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	96.15
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	96.15
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	96.15
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.14
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	96.13
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.12
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.11
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	96.11
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.1
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	96.1
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	96.1
4e4y_A	244	Short chain dehydrogenase family protein; structur	96.09
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.09
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.08
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	96.08
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	96.07
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	96.06
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	96.06
1zh8_A	340	Oxidoreductase; TM0312, structural genomics, JO ce	96.05
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	96.05
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	96.04
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.03
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	96.03
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.03
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	96.01
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.01
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	95.99
3ohs_X	334	Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; d	95.99
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	95.98
3e82_A	364	Putative oxidoreductase; NAD, GFO/IDH/MOCA family,	95.98
1id1_A	153	Putative potassium channel protein; RCK domain, E.	95.96
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	95.95
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	95.95
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	95.95
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	95.95
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	95.94
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	95.93
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	95.93
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	95.92
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	95.91
1xq6_A	253	Unknown protein; structural genomics, protein stru	95.89
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	95.86
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	95.85
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	95.85
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	95.85
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.83
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	95.83
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	95.83
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	95.83
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	95.82
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	95.81
3oa2_A	318	WBPB; oxidoreductase, sugar biosynthesis, dehydrog	95.81
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	95.81
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	95.8
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	95.76
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	95.76
4h3v_A	390	Oxidoreductase domain protein; structural genomics	95.74
3o9z_A	312	Lipopolysaccaride biosynthesis protein WBPB; oxido	95.73
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	95.73
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	95.72
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	95.71
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	95.7
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	95.7
2ho3_A	325	Oxidoreductase, GFO/IDH/MOCA family; streptococcus	95.69
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	95.69
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	95.68
3mz0_A	344	Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd;	95.68
3kux_A	352	Putative oxidoreductase; oxidoreductase family, cs	95.67
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	95.66
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	95.64
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	95.63
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	95.63
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	95.62
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.6
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	95.6
3evn_A	329	Oxidoreductase, GFO/IDH/MOCA family; structural ge	95.6
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	95.6
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	95.58
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	95.56
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	95.56
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	95.56
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	95.55
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	95.54
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	95.53
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	95.53
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	95.53
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	95.52
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	95.49
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	95.49
1xea_A	323	Oxidoreductase, GFO/IDH/MOCA family; structural ge	95.49
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	95.49
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	95.44
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	95.43
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	95.43
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.43
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	95.43
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	95.42
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	95.42
2pxx_A	215	Uncharacterized protein MGC2408; structural genomi	95.4
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	95.4
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	95.39
3f4l_A	345	Putative oxidoreductase YHHX; structural genomics,	95.38
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	95.37
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	95.36
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	95.36
3hdj_A	313	Probable ornithine cyclodeaminase; APC62486, borde	95.35
3ec7_A	357	Putative dehydrogenase; alpha-beta, structural gen	95.35
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	95.34
3gdo_A	358	Uncharacterized oxidoreductase YVAA; structural ge	95.34
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.3
3g07_A	292	7SK snRNA methylphosphate capping enzyme; structur	95.28
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	95.28
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	95.27
3fhl_A	362	Putative oxidoreductase; NAD-binding domain, PSI-2	95.27
3dty_A	398	Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetram	95.23
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.21
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	95.21
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	95.19
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	95.19
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	95.18
3i23_A	349	Oxidoreductase, GFO/IDH/MOCA family; structural ge	95.17
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	95.17
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.17
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	95.17
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	95.17
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	95.16
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	95.15
3v5n_A	417	Oxidoreductase; structural genomics, PSI-biology,	95.14
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.13
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	95.12
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	95.12
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	95.1
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	95.1
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	95.09
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.08
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	95.08
2ixa_A	444	Alpha-N-acetylgalactosaminidase; NAD, A-ECO conver	95.08
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	95.05
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	95.04
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	95.03
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	95.03
1ixk_A	315	Methyltransferase; open beta sheet; 1.90A {Pyrococ	95.02
1np3_A	338	Ketol-acid reductoisomerase; A DEEP figure-OF-eigh	95.0
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	95.0
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	95.0
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	94.99
3qha_A	296	Putative oxidoreductase; seattle structural genomi	94.98
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	94.97
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	94.95
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	94.95
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	94.94
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	94.94
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	94.93

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=6.3e-59  Score=448.71  Aligned_cols=348  Identities=49%  Similarity=0.921  Sum_probs=305.2

Q ss_pred             CCCCcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCC
Q 018022           10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV   89 (362)
Q Consensus        10 ~~~~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v   89 (362)
                      +..+|++|||+++++++++++++++|.|+|+++||||||.+++||++|++++.|..+...+|.++|||++|+|+++|++|
T Consensus         2 ~~~~~~tmkA~v~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v   81 (378)
T 3uko_A            2 TQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV   81 (378)
T ss_dssp             CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEECTTC
T ss_pred             CcccceeeEEEEEecCCCccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCCCCCCccCCccceEEEEEeCCCC
Confidence            34678999999999999889999999999999999999999999999999999987777889999999999999999999


Q ss_pred             CCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeecCceE
Q 018022           90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVV  168 (362)
Q Consensus        90 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~  168 (362)
                      ++|++||||++.+..+|++|.+|+++++++|++.......|.. .+|...+. ..|....+.++.|+|+||+++|+++++
T Consensus        82 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~  160 (378)
T 3uko_A           82 TEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFS-VNGKPIYHFMGTSTFSQYTVVHDVSVA  160 (378)
T ss_dssp             CSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEE-ETTEEEBCCTTTCCSBSEEEEEGGGEE
T ss_pred             CcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccc-cCCcccccccCCcceEeEEEechhheE
Confidence            9999999999999999999999999999999987653334433 34433332 244445556667899999999999999


Q ss_pred             EcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc
Q 018022          169 KVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT  248 (362)
Q Consensus       169 ~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~  248 (362)
                      ++|+++++++||++++++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++|++
T Consensus       161 ~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~  240 (378)
T 3uko_A          161 KIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVN  240 (378)
T ss_dssp             ECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCC
T ss_pred             ECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCc
Confidence            99999999999999999999999988889999999999999999999999999999998899999999999999999999


Q ss_pred             EEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEE
Q 018022          249 EFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMG  328 (362)
Q Consensus       249 ~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g  328 (362)
                      +++++++ .+.++.+.+++++++++|+||||+|++..++.+++.+++++|+++.+|.......+++++..++. ++++.|
T Consensus       241 ~vi~~~~-~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~-~~~i~g  318 (378)
T 3uko_A          241 EFVNPKD-HDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKG  318 (378)
T ss_dssp             EEECGGG-CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHT-TCEEEE
T ss_pred             EEEcccc-CchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHhc-CcEEEE
Confidence            9999872 12689999999988899999999999888999999999922999999986555667777777766 999999


Q ss_pred             eeccCCCccccHHHHHHHHHcCCcccc--eeccc
Q 018022          329 SLFGGLKAKSDIPILLKRYMDKWSYVP--FSGTR  360 (362)
Q Consensus       329 ~~~~~~~~~~~l~~~l~~~~~g~l~~~--~~~~~  360 (362)
                      ++++.+..+++++++++++++|++++.  ++.+|
T Consensus       319 ~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~  352 (378)
T 3uko_A          319 TAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNL  352 (378)
T ss_dssp             CSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEE
T ss_pred             EEecCCCchHHHHHHHHHHHcCCCChhHheeeEe
Confidence            988766667899999999999999854  55544

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=1.2e-56  Score=432.02  Aligned_cols=346  Identities=40%  Similarity=0.694  Sum_probs=290.9

Q ss_pred             CCCCCCcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCC
Q 018022            8 NKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGE   87 (362)
Q Consensus         8 ~~~~~~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~   87 (362)
                      |++.++|++|||+++.+++++++++++|.|+|+++||||||.+++||++|++++.|..+ ..+|.++|||++|+|+++|+
T Consensus         1 ~~~~~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~   79 (373)
T 1p0f_A            1 MCTAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVESIGA   79 (373)
T ss_dssp             -CCTTSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEEEEEEECT
T ss_pred             CcccCCcceeEEEEEEcCCCCeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC-CCCCcccCcCceEEEEEECC
Confidence            34567889999999999986799999999999999999999999999999999988765 56899999999999999999


Q ss_pred             CCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCce
Q 018022           88 NVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV  167 (362)
Q Consensus        88 ~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~  167 (362)
                      +|++|++||||++.+..+|++|.+|+.+++++|++.....+.|...+|..++. ..|....+.+..|+|+||+++|++++
T Consensus        80 ~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~  158 (373)
T 1p0f_A           80 GVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFT-CRGKPIYNLMGTSTFTEYTVVADIAV  158 (373)
T ss_dssp             TCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEE-ETTEEEBCSTTTCCSBSEEEEETTSE
T ss_pred             CCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccc-cCCcccccccCCccceeEEEEchhhE
Confidence            99999999999999999999999999999999998654211233222211110 01111112223469999999999999


Q ss_pred             EEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC
Q 018022          168 VKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV  247 (362)
Q Consensus       168 ~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~  247 (362)
                      +++|++++++ ||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+.+|++++++++|+++++++|+
T Consensus       159 ~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa  237 (373)
T 1p0f_A          159 AKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA  237 (373)
T ss_dssp             EEECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTC
T ss_pred             EECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC
Confidence            9999999999 999999999999988888999999999999999999999999999999789999999999999999999


Q ss_pred             cEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCC-ceEEEEccCCCCCccccCHHHHHhcCcEE
Q 018022          248 TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGW-GKTIVLGVDQPGSQLSLSSFEVLHSGKIL  326 (362)
Q Consensus       248 ~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i  326 (362)
                      ++++++++ .++++.+.+++++++++|+|||++|.+..++.+++++++ + |+++.+|........++++..++.++ ++
T Consensus       238 ~~vi~~~~-~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i  314 (373)
T 1p0f_A          238 TECLNPKD-YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYC-GSGVTVVLGLASPNERLPLDPLLLLTGR-SL  314 (373)
T ss_dssp             SEEECGGG-CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECCCCCTTCCEEECTHHHHTTC-EE
T ss_pred             cEEEeccc-ccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhc-CCCEEEEEccCCCCCccccCHHHhccCc-eE
Confidence            99998763 014688899988877999999999998779999999999 6 99999997544345677877787878 99


Q ss_pred             EEeeccCCCccccHHHHHHHHHcCCccc--ceeccc
Q 018022          327 MGSLFGGLKAKSDIPILLKRYMDKWSYV--PFSGTR  360 (362)
Q Consensus       327 ~g~~~~~~~~~~~l~~~l~~~~~g~l~~--~~~~~~  360 (362)
                      .|++++.+. .++++++++++++|+|++  .++.+|
T Consensus       315 ~g~~~~~~~-~~~~~~~~~l~~~g~i~~~~~i~~~~  349 (373)
T 1p0f_A          315 KGSVFGGFK-GEEVSRLVDDYMKKKINVNFLVSTKL  349 (373)
T ss_dssp             EECSGGGCC-GGGHHHHHHHHHTTSSCGGGGEEEEE
T ss_pred             EeeccCCcC-HHHHHHHHHHHHcCCCCchheEEEEe
Confidence            998765432 378999999999999984  455554

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=4e-56  Score=428.56  Aligned_cols=345  Identities=39%  Similarity=0.723  Sum_probs=290.9

Q ss_pred             CCCcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCC
Q 018022           11 AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVD   90 (362)
Q Consensus        11 ~~~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~   90 (362)
                      ..+|++|||+++.+++++++++++|.|+|+++||||||.+++||++|++++.|..+.. +|.++|||++|+|+++|++|+
T Consensus         3 ~~~~~~mkA~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~P~v~GhE~~G~V~~vG~~v~   81 (374)
T 2jhf_A            3 AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP-LPVIAGHEAAGIVESIGEGVT   81 (374)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCCC-SSBCCCCSEEEEEEEECTTCC
T ss_pred             CCCceeEEEEEEecCCCceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCCC-CCcccCcCceEEEEEECCCCC
Confidence            3578999999999998679999999999999999999999999999999998876533 899999999999999999999


Q ss_pred             CCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEc
Q 018022           91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV  170 (362)
Q Consensus        91 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~  170 (362)
                      +|++||||++.+..+|++|.+|+.+++++|++.....+.|...+|..++. ..|....+.+..|+|+||+++|+++++++
T Consensus        82 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~i  160 (374)
T 2jhf_A           82 TVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKI  160 (374)
T ss_dssp             SCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEE-ETTEEEBCSTTTCCSBSEEEEEGGGEEEC
T ss_pred             CCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCccccc-ccccccccccCCccCeeEEEEchHHeEEC
Confidence            99999999999999999999999999999998654221233222211110 01111112223469999999999999999


Q ss_pred             CCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE
Q 018022          171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF  250 (362)
Q Consensus       171 P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v  250 (362)
                      |+++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++|++++
T Consensus       161 P~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v  240 (374)
T 2jhf_A          161 DAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATEC  240 (374)
T ss_dssp             CTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEE
T ss_pred             CCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceE
Confidence            99999999999999999999988888999999999999999999999999999999789999999999999999999999


Q ss_pred             EcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCC-ceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 018022          251 VNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGW-GKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS  329 (362)
Q Consensus       251 v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  329 (362)
                      +++++ ..+++.+.+++++++++|++||++|.+..++.+++++++ + |+++.+|........++++..++.++ ++.|+
T Consensus       241 i~~~~-~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~  317 (374)
T 2jhf_A          241 VNPQD-YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQE-AYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWKGA  317 (374)
T ss_dssp             ECGGG-CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCT-TTCEEEECSCCCTTCCEEECTHHHHTTC-EEEEC
T ss_pred             ecccc-cchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhc-CCcEEEEeccCCCCCccccCHHHHhcCC-eEEEe
Confidence            98763 114688889888877899999999998779999999999 6 89999997544345677877888888 99998


Q ss_pred             eccCCCccccHHHHHHHHHcCCccc--ceeccc
Q 018022          330 LFGGLKAKSDIPILLKRYMDKWSYV--PFSGTR  360 (362)
Q Consensus       330 ~~~~~~~~~~l~~~l~~~~~g~l~~--~~~~~~  360 (362)
                      +++.+...++++++++++++|+|++  .++.+|
T Consensus       318 ~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~  350 (374)
T 2jhf_A          318 IFGGFKSKDSVPKLVADFMAKKFALDPLITHVL  350 (374)
T ss_dssp             SGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEE
T ss_pred             ccCCCChHHHHHHHHHHHHcCCCCchhheEEEE
Confidence            7665444578999999999999985  455544

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.6e-56  Score=430.97  Aligned_cols=336  Identities=28%  Similarity=0.496  Sum_probs=286.1

Q ss_pred             cceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCC
Q 018022           14 PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVV   93 (362)
Q Consensus        14 ~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~   93 (362)
                      +++|||+++.+++++++++++|.|+|+++||||||.+++||++|++++.|..+ ..+|.++|||++|+|+++|++|++|+
T Consensus         4 ~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~v~~~~   82 (371)
T 1f8f_A            4 LKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTELQ   82 (371)
T ss_dssp             CEEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             cccceEEEEcCCCCCeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC-CCCCcccCcccceEEEEeCCCCCCCC
Confidence            56799999999986699999999999999999999999999999999988654 46799999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcee-cccccccceeeeEEeecCceEEcCC
Q 018022           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI-HHFVSVSSFSEYTVLDIAHVVKVDP  172 (362)
Q Consensus        94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~-~~~~~~g~~a~y~~v~~~~~~~~P~  172 (362)
                      +||||++.+ .+|++|.+|+.+++++|++.......|...+|...+....|... .+.+..|+|+||+++|+++++++|+
T Consensus        83 ~GdrV~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~iP~  161 (371)
T 1f8f_A           83 VGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTK  161 (371)
T ss_dssp             TTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECT
T ss_pred             CCCEEEecC-CCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEECCC
Confidence            999999999 99999999999999999876421111222222111100000000 0112346999999999999999999


Q ss_pred             CCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022          173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN  252 (362)
Q Consensus       173 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~  252 (362)
                      ++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++|++++++
T Consensus       162 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~  241 (371)
T 1f8f_A          162 DVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVIN  241 (371)
T ss_dssp             TSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEE
T ss_pred             CCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEec
Confidence            99999999999999999999878899999999999999999999999999999978999999999999999999999999


Q ss_pred             CCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeecc
Q 018022          253 SKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG  332 (362)
Q Consensus       253 ~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~  332 (362)
                      +++   .++.+.+++++++++|+|||++|.+..++.++++++++ |+++.+|........++++..++.|++++.|++++
T Consensus       242 ~~~---~~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~  317 (371)
T 1f8f_A          242 SKT---QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEG  317 (371)
T ss_dssp             TTT---SCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGG
T ss_pred             CCc---cCHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcC-CEEEEeCCCCCCCccccCHHHHHhCCCEEEEeCCC
Confidence            887   78889999888778999999999987799999999998 99999998643445678888888999999998776


Q ss_pred             CCCccccHHHHHHHHHcCCcccc
Q 018022          333 GLKAKSDIPILLKRYMDKWSYVP  355 (362)
Q Consensus       333 ~~~~~~~l~~~l~~~~~g~l~~~  355 (362)
                      .+..+++++++++++++|+|++.
T Consensus       318 ~~~~~~~~~~~~~l~~~g~l~~~  340 (371)
T 1f8f_A          318 SGSPKKFIPELVRLYQQGKFPFD  340 (371)
T ss_dssp             GSCHHHHHHHHHHHHHTTSCCGG
T ss_pred             CCchHHHHHHHHHHHHcCCCCcc
Confidence            54345789999999999999874

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.9e-56  Score=426.92  Aligned_cols=345  Identities=41%  Similarity=0.728  Sum_probs=291.3

Q ss_pred             CCCCcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhh-hhhcCCCCCCCCccccccceEEEEEeCCC
Q 018022           10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVT-FWKMKDFPAVFPRILGHEAIGVVESVGEN   88 (362)
Q Consensus        10 ~~~~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~-~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~   88 (362)
                      +..+|++|||+++.+++++++++++|.|+|+++||||||.+++||++|++ ++.|..+ ..+|.++|||++|+|+++|++
T Consensus         2 ~~~~~~~mka~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~   80 (374)
T 1cdo_A            2 TVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK-DGFPVVLGHEGAGIVESVGPG   80 (374)
T ss_dssp             CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT-TSCSEECCCCEEEEEEEECTT
T ss_pred             CCCCcceeEEEEEecCCCCeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC-CCCCcccCccceEEEEEECCC
Confidence            34678999999999998779999999999999999999999999999999 8888655 567999999999999999999


Q ss_pred             CCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceE
Q 018022           89 VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVV  168 (362)
Q Consensus        89 v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~  168 (362)
                      |++|++||||++.+..+|+.|.+|+.+++++|++.....+.|...+|..++ ...|....+.+..|+|+||+++|+++++
T Consensus        81 V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~-~~~g~~~~~~~~~G~~aey~~v~~~~~~  159 (374)
T 1cdo_A           81 VTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRF-TCKGRKVLQFLGTSTFSQYTVVNQIAVA  159 (374)
T ss_dssp             CCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCE-EETTEEEEEGGGTCCSBSEEEEEGGGEE
T ss_pred             CccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCcccc-ccCCcccccccCCccceeEEEEchhheE
Confidence            999999999999999999999999999999998765321123322221111 0111111222234699999999999999


Q ss_pred             EcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc
Q 018022          169 KVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT  248 (362)
Q Consensus       169 ~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~  248 (362)
                      ++|+++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+.+|++++++++|+++++++|++
T Consensus       160 ~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~  239 (374)
T 1cdo_A          160 KIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGAT  239 (374)
T ss_dssp             ECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCC
T ss_pred             ECCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCc
Confidence            99999999999999999999999888889999999999999999999999999999997899999999999999999999


Q ss_pred             EEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCC-ceEEEEccCCCCCccccCHHHHHhcCcEEE
Q 018022          249 EFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGW-GKTIVLGVDQPGSQLSLSSFEVLHSGKILM  327 (362)
Q Consensus       249 ~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~  327 (362)
                      +++++++ .++++.+.+++++++++|++||++|.+..++.+++++++ + |+++.+|.... ..+++++..++.++ ++.
T Consensus       240 ~vi~~~~-~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~-~~~~~~~~~~~~~~-~i~  315 (374)
T 1cdo_A          240 DFVNPND-HSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLK-GWGVSVLVGWTDL-HDVATRPIQLIAGR-TWK  315 (374)
T ss_dssp             EEECGGG-CSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECSCCSS-SCEEECHHHHHTTC-EEE
T ss_pred             eEEeccc-cchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhc-CCcEEEEEcCCCC-CCcccCHHHHhcCC-eEE
Confidence            9998763 014688888888877899999999998779999999999 6 99999998543 45678888888888 999


Q ss_pred             EeeccCCCccccHHHHHHHHHcCCccc--ceeccc
Q 018022          328 GSLFGGLKAKSDIPILLKRYMDKWSYV--PFSGTR  360 (362)
Q Consensus       328 g~~~~~~~~~~~l~~~l~~~~~g~l~~--~~~~~~  360 (362)
                      |++++.+..+++++++++++++|+|++  .++.+|
T Consensus       316 g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~  350 (374)
T 1cdo_A          316 GSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRM  350 (374)
T ss_dssp             ECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEE
T ss_pred             EEecCCCCcHHHHHHHHHHHHcCCCChHHheeeEe
Confidence            987665544678999999999999984  455544

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=5.7e-56  Score=427.79  Aligned_cols=342  Identities=39%  Similarity=0.703  Sum_probs=287.9

Q ss_pred             CCcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCC
Q 018022           12 GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG   91 (362)
Q Consensus        12 ~~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~   91 (362)
                      +.||+|||+++.+++++++++++|.|+|+++||||||.+++||++|++++.|. +...+|.++|||++|+|+++|++|++
T Consensus         4 ~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~~~~P~v~GhE~~G~V~~vG~~v~~   82 (376)
T 1e3i_A            4 GKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKALFPVVLGHECAGIVESVGPGVTN   82 (376)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-SCCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             CCChheeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-CCCCCCcccCccccEEEEEECCCCcc
Confidence            56789999999999866999999999999999999999999999999999886 44568999999999999999999999


Q ss_pred             CCCCCEEEeeCCCCCCCCccccCCCCCCCCCCC----CCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCce
Q 018022           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFP----FKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV  167 (362)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~----~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~  167 (362)
                      |++||||++.+..+|++|.+|+.+++++|++..    +..+.|...+|..++. ..|....+.+..|+|+||+++|++++
T Consensus        83 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~  161 (376)
T 1e3i_A           83 FKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFT-CKGRSIYHFMGVSSFSQYTVVSEANL  161 (376)
T ss_dssp             CCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEE-ETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred             CCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccc-cCCcccccccCCccceeEEEeccccE
Confidence            999999999999999999999999999998754    1101122222211100 01111111223469999999999999


Q ss_pred             EEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC
Q 018022          168 VKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV  247 (362)
Q Consensus       168 ~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~  247 (362)
                      +++|+++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+.+|++++++++|+++++++|+
T Consensus       162 ~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa  241 (376)
T 1e3i_A          162 ARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA  241 (376)
T ss_dssp             EECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC
T ss_pred             EECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC
Confidence            99999999999999999999999988888999999999999999999999999999999889999999999999999999


Q ss_pred             cEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCC-ceEEEEccCCCCCccccCHHHHHhcCcEE
Q 018022          248 TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGW-GKTIVLGVDQPGSQLSLSSFEVLHSGKIL  326 (362)
Q Consensus       248 ~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i  326 (362)
                      ++++++++ .++++.+.+++++++++|+|||++|.+..++.+++.+++ + |+++.+|..  ....++++..++.++ ++
T Consensus       242 ~~vi~~~~-~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~-~~G~iv~~G~~--~~~~~~~~~~~~~~~-~i  316 (376)
T 1e3i_A          242 TDCLNPRE-LDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVL-GWGSCTVVGAK--VDEMTIPTVDVILGR-SI  316 (376)
T ss_dssp             SEEECGGG-CSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCT-TTCEEEECCCS--SSEEEEEHHHHHTTC-EE
T ss_pred             cEEEcccc-ccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhc-CCCEEEEECCC--CCccccCHHHhhccC-eE
Confidence            99998763 114688889888877999999999998779999999999 6 999999983  345678888888888 99


Q ss_pred             EEeeccCCCccccHHHHHHHHHcCCccc--ceeccc
Q 018022          327 MGSLFGGLKAKSDIPILLKRYMDKWSYV--PFSGTR  360 (362)
Q Consensus       327 ~g~~~~~~~~~~~l~~~l~~~~~g~l~~--~~~~~~  360 (362)
                      .|++++.+...++++++++++++|+|++  .++.+|
T Consensus       317 ~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~  352 (376)
T 1e3i_A          317 NGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHAL  352 (376)
T ss_dssp             EECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEE
T ss_pred             EEEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeee
Confidence            9987665444678999999999999985  445544

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=2.8e-56  Score=429.42  Aligned_cols=345  Identities=42%  Similarity=0.765  Sum_probs=290.1

Q ss_pred             CCcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCC
Q 018022           12 GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG   91 (362)
Q Consensus        12 ~~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~   91 (362)
                      ..||+|||+++.+++++++++++|.|+|+++||+|||.+++||++|++++.|..+...+|.++|||++|+|+++|++|++
T Consensus         2 ~~p~~mkA~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~   81 (373)
T 2fzw_A            2 NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTK   81 (373)
T ss_dssp             CCCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             CCccceEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCCCCCCccccccccEEEEEECCCCCC
Confidence            46789999999999867999999999999999999999999999999999987665678999999999999999999999


Q ss_pred             CCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 018022           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (362)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P  171 (362)
                      |++||||++.+..+|++|.+|+.+++++|++.....+.|...+|..++. ..|....+.+..|+|+||+++|+++++++|
T Consensus        82 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~iP  160 (373)
T 2fzw_A           82 LKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFT-CKGKTILHYMGTSTFSEYTVVADISVAKID  160 (373)
T ss_dssp             CCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEE-ETTEEEBCCTTTCCSBSEEEEEGGGEEECC
T ss_pred             CCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCccccc-ccccccccccCCccceeEEEEchhheEECC
Confidence            9999999999999999999999999999987532100122212211110 011111112234699999999999999999


Q ss_pred             CCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE
Q 018022          172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV  251 (362)
Q Consensus       172 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv  251 (362)
                      +++++++||++++++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+.+|++++++++|+++++++|+++++
T Consensus       161 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi  240 (373)
T 2fzw_A          161 PLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI  240 (373)
T ss_dssp             TTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEE
T ss_pred             CCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEe
Confidence            99999999999999999999888889999999999999999999999999999997899999999999999999999999


Q ss_pred             cCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCC-ceEEEEccCCCCCccccCHHHHHhcCcEEEEee
Q 018022          252 NSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGW-GKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL  330 (362)
Q Consensus       252 ~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~  330 (362)
                      ++++ ..+++.+.+++++++++|++||++|....++.+++.+++ + |+++.+|........++++..++.++ ++.|++
T Consensus       241 ~~~~-~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~  317 (373)
T 2fzw_A          241 NPQD-FSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHK-GWGVSVVVGVAASGEEIATRPFQLVTGR-TWKGTA  317 (373)
T ss_dssp             CGGG-CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECS
T ss_pred             cccc-ccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhcc-CCcEEEEEecCCCCceeeeCHHHHhcCC-EEEEec
Confidence            8763 114688889988877999999999998779999999999 6 99999997544345677877888888 999987


Q ss_pred             ccCCCccccHHHHHHHHHcCCccc--ceeccc
Q 018022          331 FGGLKAKSDIPILLKRYMDKWSYV--PFSGTR  360 (362)
Q Consensus       331 ~~~~~~~~~l~~~l~~~~~g~l~~--~~~~~~  360 (362)
                      ++.+..+++++++++++++|+|++  .++.+|
T Consensus       318 ~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~  349 (373)
T 2fzw_A          318 FGGWKSVESVPKLVSEYMSKKIKVDEFVTHNL  349 (373)
T ss_dssp             GGGCCHHHHHHHHHHHHHTTSSCSGGGEEEEE
T ss_pred             cCCCCcHHHHHHHHHHHHcCCCCchheEeEEe
Confidence            665444678999999999999984  455554

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=5.8e-56  Score=426.77  Aligned_cols=315  Identities=23%  Similarity=0.375  Sum_probs=285.7

Q ss_pred             CCcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCC
Q 018022           12 GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG   91 (362)
Q Consensus        12 ~~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~   91 (362)
                      .+|++|||+++.+++. ++++++|.|+|+++||+|||.+++||++|+.++.|.. ...+|.++|||++|+|+++|++|++
T Consensus        19 ~~p~~mkA~v~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~-~~~~p~v~G~e~~G~V~~vG~~v~~   96 (370)
T 4ej6_A           19 YFQSMMKAVRLESVGN-ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEF-PSTPPVTLGHEFCGIVVEAGSAVRD   96 (370)
T ss_dssp             --CCEEEEEEEEETTE-EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSS-CCCSSEECCCSEEEEEEEECTTCCS
T ss_pred             ccchheEEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCC-CCCCCeecCcceEEEEEEECCCCCC
Confidence            5778899999999986 9999999999999999999999999999999999876 3567999999999999999999999


Q ss_pred             CCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 018022           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (362)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P  171 (362)
                      |++||||++.+..+|+.|.+|+.+++++|++...   .|...+|                   +|+||+++|.++++++|
T Consensus        97 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~~P  154 (370)
T 4ej6_A           97 IAPGARITGDPNISCGRCPQCQAGRVNLCRNLRA---IGIHRDG-------------------GFAEYVLVPRKQAFEIP  154 (370)
T ss_dssp             SCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEEEGGGEEEEC
T ss_pred             CCCCCEEEECCCCCCCCChHHhCcCcccCCCccc---cCCCCCC-------------------cceEEEEEchhhEEECC
Confidence            9999999999999999999999999999998765   5555556                   99999999999999999


Q ss_pred             CCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE
Q 018022          172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV  251 (362)
Q Consensus       172 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv  251 (362)
                      +++++++||+ ..++.+||+++ +.+++++|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++|+++++
T Consensus       155 ~~~~~~~aal-~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi  232 (370)
T 4ej6_A          155 LTLDPVHGAF-CEPLACCLHGV-DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATV  232 (370)
T ss_dssp             TTSCTTGGGG-HHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEE
T ss_pred             CCCCHHHHhh-hhHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEE
Confidence            9999999984 45899999986 889999999999999999999999999999998999999999999999999999999


Q ss_pred             cCCCCCCccHHHHHHh---hcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEE
Q 018022          252 NSKNCGDKSVSQIIID---MTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMG  328 (362)
Q Consensus       252 ~~~~~~~~~~~~~i~~---~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g  328 (362)
                      |+++   .++.+.+++   ++++++|+||||+|....++.++++++++ |+++.+|........++++..++.|++++.|
T Consensus       233 ~~~~---~~~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~-G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g  308 (370)
T 4ej6_A          233 DPSA---GDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQGEKVEIEPFDILFRELRVLG  308 (370)
T ss_dssp             CTTS---SCHHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECSCCCTTCCCCCCHHHHHHTTCEEEE
T ss_pred             CCCC---cCHHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEeccCCCCccccCHHHHHhCCcEEEE
Confidence            9987   789999988   77679999999999988899999999998 9999999865555678899999999999999


Q ss_pred             eeccCCCccccHHHHHHHHHcCCcccc--eeccc
Q 018022          329 SLFGGLKAKSDIPILLKRYMDKWSYVP--FSGTR  360 (362)
Q Consensus       329 ~~~~~~~~~~~l~~~l~~~~~g~l~~~--~~~~~  360 (362)
                      ++.+.    ++++++++++++|++++.  ++.+|
T Consensus       309 ~~~~~----~~~~~~~~l~~~g~i~~~~~i~~~~  338 (370)
T 4ej6_A          309 SFINP----FVHRRAADLVATGAIEIDRMISRRI  338 (370)
T ss_dssp             CCSCT----TCHHHHHHHHHTTCSCCGGGEEEEE
T ss_pred             eccCh----HHHHHHHHHHHcCCCChhHcEEEEE
Confidence            87543    679999999999999654  65554

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.4e-55  Score=422.51  Aligned_cols=321  Identities=24%  Similarity=0.376  Sum_probs=275.8

Q ss_pred             CCCCCCCCCCCCcceeeEEEeccCCCceEEEEeecCC-CCCCeEEEEEeeeecchhhhhhhhcCCC---CCCCCcccccc
Q 018022            2 DIEKPSNKTAGKPIQCRAAIATAPGEPLVIDEVIVDP-PNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHE   77 (362)
Q Consensus         2 ~~~~~~~~~~~~~~~~ka~~~~~~~~~l~l~~~~~p~-~~~~eVlVkv~~~~i~~~d~~~~~g~~~---~~~~p~~~G~e   77 (362)
                      -|.|+...+ ..|++|||+++.+++++++++++|.|+ |+++||+|||.+++||++|++.+.|..+   ...+|.++|||
T Consensus         2 ~~~~~~~~~-~~~~~mka~~~~~~g~~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E   80 (359)
T 1h2b_A            2 RIEQDFSQS-LGVERLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHE   80 (359)
T ss_dssp             ----------------CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCC
T ss_pred             chhhhhhhc-CChhhceEEEEecCCCCcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcC
Confidence            345555432 346789999999998669999999999 9999999999999999999999998764   34689999999


Q ss_pred             ceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeccccccccee
Q 018022           78 AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFS  157 (362)
Q Consensus        78 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a  157 (362)
                      ++|+|+++|++|++|++||||+..+..+|+.|.+|+.+++++|++...   .|...+|                   +|+
T Consensus        81 ~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~~~G-------------------~~a  138 (359)
T 1h2b_A           81 NVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEF---PGLNIDG-------------------GFA  138 (359)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBC---BTTTBCC-------------------SSB
T ss_pred             ceEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccc---cccCCCC-------------------ccc
Confidence            999999999999999999999999999999999999999999998764   4544455                   999


Q ss_pred             eeEEeecCceEEcCCCCCccchh---ccccchhhhHHHHHHh-cCCCCCCEEEEECCChHHHHHHHHHHHc-CCCEEEEE
Q 018022          158 EYTVLDIAHVVKVDPTVPPNRAC---LLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGV  232 (362)
Q Consensus       158 ~y~~v~~~~~~~~P~~l~~~~aa---~~~~~~~ta~~~l~~~-~~~~~g~~vlI~Gag~~G~~a~~la~~~-g~~~vi~~  232 (362)
                      ||+++|+++++++|+++++++||   .+++++.|||+++.+. .++++|++|||+|+|++|++++|+|+++ |+ +|+++
T Consensus       139 ey~~v~~~~~~~iP~~~~~~~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~  217 (359)
T 1h2b_A          139 EFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIAL  217 (359)
T ss_dssp             SEEEECGGGEEECCTTCCHHHHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEE
T ss_pred             ceEEechHhEEECCCCCCHHHHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEE
Confidence            99999999999999999999998   6777888999987655 8999999999999999999999999999 99 89999


Q ss_pred             cCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHH--HHHHHHHHhccCCceEEEEccCCCC
Q 018022          233 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLAS--LVQEAYACCRKGWGKTIVLGVDQPG  309 (362)
Q Consensus       233 ~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~--~~~~~~~~l~~~~G~iv~~G~~~~~  309 (362)
                      +++++|+++++++|+++++|+++   + +.+.+++++++ ++|++||++|++.  .++.+++.  ++ |+++.+|.... 
T Consensus       218 ~~~~~~~~~~~~lGa~~vi~~~~---~-~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~-G~~v~~g~~~~-  289 (359)
T 1h2b_A          218 DVKEEKLKLAERLGADHVVDARR---D-PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RM-GRLIIVGYGGE-  289 (359)
T ss_dssp             ESSHHHHHHHHHTTCSEEEETTS---C-HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EE-EEEEECCCSSC-
T ss_pred             eCCHHHHHHHHHhCCCEEEeccc---h-HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CC-CEEEEEeCCCC-
Confidence            99999999999999999999987   5 88889999887 9999999999986  68888887  76 99999998543 


Q ss_pred             CccccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHHHcCCcccceeccc
Q 018022          310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       310 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                       . ++++..++.|++++.|++.+.   +++++++++++++|+|++.+ .+|
T Consensus       290 -~-~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~i-~~~  334 (359)
T 1h2b_A          290 -L-RFPTIRVISSEVSFEGSLVGN---YVELHELVTLALQGKVRVEV-DIH  334 (359)
T ss_dssp             -C-CCCHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSCCCCE-EEE
T ss_pred             -C-CCCHHHHHhCCcEEEEecCCC---HHHHHHHHHHHHcCCCcceE-EEE
Confidence             2 677778889999999986543   58899999999999999887 554

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=6.4e-55  Score=414.91  Aligned_cols=308  Identities=27%  Similarity=0.391  Sum_probs=282.5

Q ss_pred             eeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCCC
Q 018022           16 QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVE   94 (362)
Q Consensus        16 ~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~~   94 (362)
                      +|||+++++++++++++++|.|+|+++||||||.+++||++|++.+.|..+. ..+|.++|||++|+|+++|+++++|++
T Consensus         2 ~MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~v   81 (340)
T 3s2e_A            2 MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKE   81 (340)
T ss_dssp             EEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECSSCCSCCT
T ss_pred             ceEEEEEecCCCCCEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEEECCCCCcCCC
Confidence            5999999998877999999999999999999999999999999999998765 568999999999999999999999999


Q ss_pred             CCEE-EeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           95 GDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        95 Gd~V-~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      |||| +.++..+|+.|.+|+.+++++|++...   .|...+|                   +|+||+++|+++++++|++
T Consensus        82 GdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~iP~~  139 (340)
T 3s2e_A           82 GDRVGVPWLYSACGYCEHCLQGWETLCEKQQN---TGYSVNG-------------------GYGEYVVADPNYVGLLPDK  139 (340)
T ss_dssp             TCEEEEESEEECCSSSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEECTTTSEECCTT
T ss_pred             CCEEEecCCCCCCCCChHHhCcCcccCccccc---cCCCCCC-------------------cceeEEEechHHEEECCCC
Confidence            9999 566788999999999999999998775   5655666                   9999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  253 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~  253 (362)
                      +++++||.+++++.|||+++ +..++++|++|||+|+|++|++++|+|+++|+ +|++++++++|+++++++|+++++|+
T Consensus       140 ~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~i~~  217 (340)
T 3s2e_A          140 VGFVEIAPILCAGVTVYKGL-KVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNA  217 (340)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HTTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHhhcccchhHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCEEEeC
Confidence            99999999999999999986 77899999999999999999999999999999 99999999999999999999999999


Q ss_pred             CCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccC
Q 018022          254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG  333 (362)
Q Consensus       254 ~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  333 (362)
                      ++   .++.+.+++.. +++|++||++|+...++.++++++++ |+++.+|...  ...+++...++.+++++.|++.+.
T Consensus       218 ~~---~~~~~~~~~~~-g~~d~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~~~~~i~g~~~~~  290 (340)
T 3s2e_A          218 RD---TDPAAWLQKEI-GGAHGVLVTAVSPKAFSQAIGMVRRG-GTIALNGLPP--GDFGTPIFDVVLKGITIRGSIVGT  290 (340)
T ss_dssp             TT---SCHHHHHHHHH-SSEEEEEESSCCHHHHHHHHHHEEEE-EEEEECSCCS--SEEEEEHHHHHHTTCEEEECCSCC
T ss_pred             CC---cCHHHHHHHhC-CCCCEEEEeCCCHHHHHHHHHHhccC-CEEEEeCCCC--CCCCCCHHHHHhCCeEEEEEecCC
Confidence            87   78888888843 48999999999998899999999998 9999999754  356788888999999999987654


Q ss_pred             CCccccHHHHHHHHHcCCccccee
Q 018022          334 LKAKSDIPILLKRYMDKWSYVPFS  357 (362)
Q Consensus       334 ~~~~~~l~~~l~~~~~g~l~~~~~  357 (362)
                         +++++++++++++|+|++.++
T Consensus       291 ---~~~~~~~~~l~~~g~l~~~~~  311 (340)
T 3s2e_A          291 ---RSDLQESLDFAAHGDVKATVS  311 (340)
T ss_dssp             ---HHHHHHHHHHHHTTSCCCCEE
T ss_pred             ---HHHHHHHHHHHHhCCCCceEE
Confidence               588999999999999998765

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=7.8e-55  Score=415.62  Aligned_cols=316  Identities=22%  Similarity=0.341  Sum_probs=268.5

Q ss_pred             CcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhc-CCC--CCCCCccccccceEEEEEeCCCC
Q 018022           13 KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKM-KDF--PAVFPRILGHEAIGVVESVGENV   89 (362)
Q Consensus        13 ~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g-~~~--~~~~p~~~G~e~~G~Vv~vG~~v   89 (362)
                      ||++|||+++.+++..++++++|.|+|+++||||||.+++||++|++.+.| .++  ...+|.++|||++|+|+++|++|
T Consensus         1 ~m~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v   80 (348)
T 2d8a_A            1 MSEKMVAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGV   80 (348)
T ss_dssp             --CEEEEEEECSSSSSCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTC
T ss_pred             CCCcceEEEEECCCCCEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCC
Confidence            356799999999984499999999999999999999999999999999988 432  24679999999999999999999


Q ss_pred             CCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEE
Q 018022           90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (362)
Q Consensus        90 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~  169 (362)
                      ++|++||||++.+..+|++|.+|+++++++|++...   .|...+|                   +|+||+++|++++++
T Consensus        81 ~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~  138 (348)
T 2d8a_A           81 EGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKI---FGVDTDG-------------------VFAEYAVVPAQNIWK  138 (348)
T ss_dssp             CSCCTTCEEEECCEECCSCCC------------CEE---TTTSSCC-------------------SSBSEEEEEGGGEEE
T ss_pred             CcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCe---ecCCCCC-------------------cCcceEEeChHHeEE
Confidence            999999999999999999999999999999998764   4544455                   999999999999999


Q ss_pred             cCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE
Q 018022          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE  249 (362)
Q Consensus       170 ~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~  249 (362)
                      +|+++++++||+++ ++.|||+++ +..++ +|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++
T Consensus       139 iP~~~~~~~aa~~~-~~~ta~~~l-~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~  215 (348)
T 2d8a_A          139 NPKSIPPEYATLQE-PLGNAVDTV-LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADY  215 (348)
T ss_dssp             CCTTSCHHHHTTHH-HHHHHHHHH-TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSE
T ss_pred             CCCCCCHHHHHhhh-HHHHHHHHH-HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCE
Confidence            99999999999886 888999987 77889 9999999999999999999999999878999999999999999999999


Q ss_pred             EEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCH-HHHHhcCcEEE
Q 018022          250 FVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS-FEVLHSGKILM  327 (362)
Q Consensus       250 vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~~~i~  327 (362)
                      ++++++   +++.+.+++++++ ++|++||++|.+..++.++++++++ |+++.+|....  ..++++ ..++.|++++.
T Consensus       216 ~~~~~~---~~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~--~~~~~~~~~~~~~~~~i~  289 (348)
T 2d8a_A          216 VINPFE---EDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGLYPG--KVTIDFNNLIIFKALTIY  289 (348)
T ss_dssp             EECTTT---SCHHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCSS--CCCCCHHHHTTTTTCEEE
T ss_pred             EECCCC---cCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC--CcccCchHHHHhCCcEEE
Confidence            999887   7899999999887 9999999999977799999999997 99999997533  456777 77888999999


Q ss_pred             EeeccCCCccccHHHHHHHHHcCCc--ccceecccC
Q 018022          328 GSLFGGLKAKSDIPILLKRYMDKWS--YVPFSGTRA  361 (362)
Q Consensus       328 g~~~~~~~~~~~l~~~l~~~~~g~l--~~~~~~~~~  361 (362)
                      |++.+.  ..++++++++++++|++  ++.++.+|.
T Consensus       290 g~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~  323 (348)
T 2d8a_A          290 GITGRH--LWETWYTVSRLLQSGKLNLDPIITHKYK  323 (348)
T ss_dssp             ECCCCC--SHHHHHHHHHHHHHTCCCCTTTEEEEEE
T ss_pred             EecCCC--cHHHHHHHHHHHHcCCCChHHhheeeCC
Confidence            986543  15789999999999995  566666653

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=5.6e-54  Score=409.17  Aligned_cols=314  Identities=23%  Similarity=0.341  Sum_probs=279.8

Q ss_pred             eeEEEeccCCCceEEEEeecCC-CCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDP-PNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~-~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G   95 (362)
                      |||++++++|. ++++|+|.|+ ++||||||||.++|||++|++.+.|..+ ..+|+++|||++|+|+++|++|++|++|
T Consensus         1 MkAvv~~~~g~-l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~-~~~P~i~G~E~~G~V~~vG~~V~~~~~G   78 (346)
T 4a2c_A            1 MKSVVNDTDGI-VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGA-HYYPITLGHEFSGYIDAVGSGVDDLHPG   78 (346)
T ss_dssp             CEEEEECSSSC-EEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCS-SSSSBCCCCEEEEEEEEECTTCCSCCTT
T ss_pred             CCEEEEecCCC-EEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCC-CCCCccccEEEEEEEEEECCCcccccCC
Confidence            89999999998 9999999998 5799999999999999999999888654 4689999999999999999999999999


Q ss_pred             CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (362)
Q Consensus        96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~  175 (362)
                      |||++.+...|+.|..|..+++++|.+..+   .|...+|                   +|+||+++|+++++++|++++
T Consensus        79 drV~~~~~~~~g~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~iP~~l~  136 (346)
T 4a2c_A           79 DAVACVPLLPCFTCPECLKGFYSQCAKYDF---IGSRRDG-------------------GFAEYIVVKRKNVFALPTDMP  136 (346)
T ss_dssp             CEEEECCEECCSCSHHHHTTCGGGCSSCEE---BTTTBCC-------------------SSBSEEEEEGGGEEECCTTSC
T ss_pred             CeEEeeeccCCCCcccccCCccccCCCccc---ccCCCCc-------------------ccccccccchheEEECCCCCC
Confidence            999999999999999999999999998876   5666667                   999999999999999999999


Q ss_pred             ccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCC
Q 018022          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN  255 (362)
Q Consensus       176 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~  255 (362)
                      +++||+++ .+.++++ +....++++|++|||+|+|++|++++|+|+++|+..+++++++++|+++++++|+++++|+++
T Consensus       137 ~~~aa~l~-~~~~~~~-~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~  214 (346)
T 4a2c_A          137 IEDGAFIE-PITVGLH-AFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE  214 (346)
T ss_dssp             GGGGGGHH-HHHHHHH-HHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTT
T ss_pred             HHHHHhch-HHHHHHH-HHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCC
Confidence            99999876 4455555 578899999999999999999999999999999988899999999999999999999999988


Q ss_pred             CCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCc-cccCHHHHHhcCcEEEEeeccC
Q 018022          256 CGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ-LSLSSFEVLHSGKILMGSLFGG  333 (362)
Q Consensus       256 ~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~-~~~~~~~~~~~~~~i~g~~~~~  333 (362)
                         .++.+.+++++++ ++|++||++|.+..++.++++++++ |+++++|....... ..+++..++.|++++.|++++.
T Consensus       215 ---~~~~~~~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~  290 (346)
T 4a2c_A          215 ---MSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH-AQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNY  290 (346)
T ss_dssp             ---SCHHHHHHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTT-CEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTC
T ss_pred             ---CCHHHHHHhhcccCCcccccccccccchhhhhhheecCC-eEEEEEeccCCCccccccCHHHHhhceeEEEEEeccc
Confidence               7888888888877 9999999999998899999999997 99999998654332 2345567888999999997654


Q ss_pred             CC--ccccHHHHHHHHHcCCcccc--eeccc
Q 018022          334 LK--AKSDIPILLKRYMDKWSYVP--FSGTR  360 (362)
Q Consensus       334 ~~--~~~~l~~~l~~~~~g~l~~~--~~~~~  360 (362)
                      ..  ..++++++++++++|+|++.  |+++|
T Consensus       291 ~~~~~~~~~~~~~~l~~~g~l~~~~lI~~~~  321 (346)
T 4a2c_A          291 SSPWPGQEWETASRLLTERKLSLEPLIAHRG  321 (346)
T ss_dssp             CSSTTCHHHHHHHHHHHTTCSCCGGGEEEEE
T ss_pred             cCcchHHHHHHHHHHHHcCCCCCCccEeEEE
Confidence            32  35789999999999998654  66655

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=8e-54  Score=409.88  Aligned_cols=315  Identities=21%  Similarity=0.330  Sum_probs=275.3

Q ss_pred             cceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCC---CCCCCccccccceEEEEEeCCCCC
Q 018022           14 PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENVD   90 (362)
Q Consensus        14 ~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~---~~~~p~~~G~e~~G~Vv~vG~~v~   90 (362)
                      +|+|||+++.+++. ++++++|.|+|+++||+|||.++|||++|++++.+...   ...+|.++|||++|+|+++|++|+
T Consensus         5 ~~~mka~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~   83 (356)
T 1pl8_A            5 KPNNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVK   83 (356)
T ss_dssp             CCCCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCC
T ss_pred             ccCceEEEEecCCc-EEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCC
Confidence            46799999999876 99999999999999999999999999999998875321   135799999999999999999999


Q ss_pred             CCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeecCceEE
Q 018022           91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (362)
Q Consensus        91 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~  169 (362)
                      +|++||||++.+..+|++|.+|+.+++++|++..+   .|.. .+|                   +|+||+++|++++++
T Consensus        84 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~G-------------------~~aey~~v~~~~~~~  141 (356)
T 1pl8_A           84 HLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFF---CATPPDDG-------------------NLCRFYKHNAAFCYK  141 (356)
T ss_dssp             SCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEE---TTBTTBCC-------------------SCBSEEEEEGGGEEE
T ss_pred             CCCCCCEEEEeccCCCCCChHHHCcCcccCCCccc---cCcCCCCC-------------------ccccEEEeehHHEEE
Confidence            99999999999999999999999999999998764   3332 234                   999999999999999


Q ss_pred             cCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE
Q 018022          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE  249 (362)
Q Consensus       170 ~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~  249 (362)
                      +|+++++++|+++. ++.|||+++ +.+++++|++|||+|+|++|++++|+|+++|+.+|++++++++|+++++++|+++
T Consensus       142 iP~~l~~~~aa~~~-~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~  219 (356)
T 1pl8_A          142 LPDNVTFEEGALIE-PLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADL  219 (356)
T ss_dssp             CCTTSCHHHHHHHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSE
T ss_pred             CcCCCCHHHHHhhc-hHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCE
Confidence            99999999998764 788999987 7889999999999999999999999999999989999999999999999999999


Q ss_pred             EEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 018022          250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS  329 (362)
Q Consensus       250 vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  329 (362)
                      +++++..++.++.+.+++.+++++|++||++|.+..++.++++++++ |+++.+|...  ...++++..++.|++++.|+
T Consensus       220 vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~~~~~i~g~  296 (356)
T 1pl8_A          220 VLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGS--EMTTVPLLHAAIREVDIKGV  296 (356)
T ss_dssp             EEECSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCC--SCCCCCHHHHHHTTCEEEEC
T ss_pred             EEcCcccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEecCC--CCCccCHHHHHhcceEEEEe
Confidence            99987100156778888877668999999999987789999999997 9999999743  34578888899999999998


Q ss_pred             eccCCCccccHHHHHHHHHcCCcc--cceeccc
Q 018022          330 LFGGLKAKSDIPILLKRYMDKWSY--VPFSGTR  360 (362)
Q Consensus       330 ~~~~~~~~~~l~~~l~~~~~g~l~--~~~~~~~  360 (362)
                      +.+    .++++++++++++|+++  +.++.+|
T Consensus       297 ~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~  325 (356)
T 1pl8_A          297 FRY----CNTWPVAISMLASKSVNVKPLVTHRF  325 (356)
T ss_dssp             CSC----SSCHHHHHHHHHTTSCCCGGGEEEEE
T ss_pred             ccc----HHHHHHHHHHHHcCCCChHHheEEEe
Confidence            643    47899999999999975  4555544

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=3.7e-54  Score=411.55  Aligned_cols=316  Identities=22%  Similarity=0.280  Sum_probs=278.8

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhh-hhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVT-FWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~-~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G   95 (362)
                      |||+++.++++ ++++++|.|+|+++||+|||.+++||++|++ ++.|..+ .++|.++|||++|+|+++|++|++|++|
T Consensus         1 MkA~~~~~~~~-~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~p~v~G~E~~G~V~~vG~~v~~~~vG   78 (352)
T 3fpc_A            1 MKGFAMLSIGK-VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG-ERHNMILGHEAVGEVVEVGSEVKDFKPG   78 (352)
T ss_dssp             CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTC-CCSSEECCCEEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEccCCC-ceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCC-CCCCcccCCcceEEEEEECCCCCcCCCC
Confidence            89999999998 9999999999999999999999999999999 5567654 4679999999999999999999999999


Q ss_pred             CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC--ceEEcCCC
Q 018022           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT  173 (362)
Q Consensus        96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~--~~~~~P~~  173 (362)
                      |||++.+..+|+.|.+|+.++.+.|.........+...+|                   +|+||+.+|+.  +++++|++
T Consensus        79 drV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G-------------------~~aey~~v~~~~~~~~~iP~~  139 (352)
T 3fpc_A           79 DRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDG-------------------VFGEFFHVNDADMNLAHLPKE  139 (352)
T ss_dssp             CEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCC-------------------SSBSCEEESSHHHHCEECCTT
T ss_pred             CEEEEccccCCCCchhhcCCCcCCccccccccccccCCCC-------------------cccceEEeccccCeEEECCCC
Confidence            9999999999999999999999999765433223333445                   99999999976  99999999


Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  253 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~  253 (362)
                      +++++|++++.++.|||+++ +.+++++|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++|+++++++
T Consensus       140 ~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~  218 (352)
T 3fpc_A          140 IPLEAAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINY  218 (352)
T ss_dssp             SCHHHHTTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECG
T ss_pred             CCHHHHhhccchhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcC
Confidence            99999999988999999986 88999999999999999999999999999999889999999999999999999999999


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHH--HHhcCcEEEEee
Q 018022          254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFE--VLHSGKILMGSL  330 (362)
Q Consensus       254 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~--~~~~~~~i~g~~  330 (362)
                      ++   .++.+.+++++++ ++|++||++|++..++.++++++++ |+++.+|...+...++++...  +..+++++.|++
T Consensus       219 ~~---~~~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~  294 (352)
T 3fpc_A          219 KN---GDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPG-SDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGL  294 (352)
T ss_dssp             GG---SCHHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBC
T ss_pred             CC---cCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEecccCCCCceecchhHhhhhccccEEEEee
Confidence            87   7899999999988 9999999999987799999999998 999999986544445554432  345789999986


Q ss_pred             ccCCCccccHHHHHHHHHcCCcccc--eeccc
Q 018022          331 FGGLKAKSDIPILLKRYMDKWSYVP--FSGTR  360 (362)
Q Consensus       331 ~~~~~~~~~l~~~l~~~~~g~l~~~--~~~~~  360 (362)
                      ...  .+++++++++++++|+|++.  ++.+|
T Consensus       295 ~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~  324 (352)
T 3fpc_A          295 CPG--GRLRMERLIDLVFYKRVDPSKLVTHVF  324 (352)
T ss_dssp             CCC--HHHHHHHHHHHHHTTSCCGGGGEEEEE
T ss_pred             ccC--chhHHHHHHHHHHcCCCChhHhheeeC
Confidence            432  25789999999999999986  55554

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=7e-54  Score=411.28  Aligned_cols=315  Identities=22%  Similarity=0.301  Sum_probs=276.2

Q ss_pred             CCcceeeEEEeccCCCceEEEEeecC--------CCCCCeEEEEEeeeecchhhhhhhhcCC---CCCCCCccccccceE
Q 018022           12 GKPIQCRAAIATAPGEPLVIDEVIVD--------PPNSHEVRVRIICTSLCHSDVTFWKMKD---FPAVFPRILGHEAIG   80 (362)
Q Consensus        12 ~~~~~~ka~~~~~~~~~l~l~~~~~p--------~~~~~eVlVkv~~~~i~~~d~~~~~g~~---~~~~~p~~~G~e~~G   80 (362)
                      +++++|||+++.+++. ++++++|.|        +|+++||||||.+++||++|++++.+..   ...++|.++|||++|
T Consensus         4 ~~~~~mka~~~~~~~~-l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~G   82 (363)
T 3m6i_A            4 SASKTNIGVFTNPQHD-LWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAG   82 (363)
T ss_dssp             -CCSCCEEEEECTTCC-EEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEEE
T ss_pred             CCcccceeEEEeCCCc-EEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceEE
Confidence            3678899999999887 999999999        9999999999999999999999987532   124679999999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceecccccccceeee
Q 018022           81 VVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEY  159 (362)
Q Consensus        81 ~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~y  159 (362)
                      +|+++|++|++|++||||++.+..+|++|.+|+.++++.|++..+   .|.. .+|                   +|+||
T Consensus        83 ~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~---~g~~~~~G-------------------~~aey  140 (363)
T 3m6i_A           83 EVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDF---LSTPPVPG-------------------LLRRY  140 (363)
T ss_dssp             EEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEE---TTSTTSCC-------------------SCBSE
T ss_pred             EEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccc---cCCCCCCc-------------------cceeE
Confidence            999999999999999999999999999999999999999998776   3332 344                   99999


Q ss_pred             EEeecCceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHH
Q 018022          160 TVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKF  239 (362)
Q Consensus       160 ~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~  239 (362)
                      +++|+++++++|+ +++++||++. ++.|||+++ +.+++++|++|||+|+|++|++++|+|+++|+++|++++++++|+
T Consensus       141 ~~v~~~~~~~iP~-~s~~~aa~~~-~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~  217 (363)
T 3m6i_A          141 VNHPAVWCHKIGN-MSYENGAMLE-PLSVALAGL-QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRL  217 (363)
T ss_dssp             EEEEGGGEEECTT-CCHHHHHHHH-HHHHHHHHH-HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHH
T ss_pred             EEEehhhEEECCC-CCHHHHHhhh-HHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            9999999999999 9999999885 889999987 889999999999999999999999999999996699999999999


Q ss_pred             HHHHhcCCcEEEcCCC--CCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCH
Q 018022          240 EIGKRFGVTEFVNSKN--CGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS  316 (362)
Q Consensus       240 ~~~~~~g~~~vv~~~~--~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~  316 (362)
                      ++++++ +++++++..  ..++++.+.+++++++ ++|++||++|++..++.++++++++ |+++.+|....  ...+++
T Consensus       218 ~~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~  293 (363)
T 3m6i_A          218 KFAKEI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFG-GKVFVIGVGKN--EIQIPF  293 (363)
T ss_dssp             HHHHHH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECCCCCS--CCCCCH
T ss_pred             HHHHHh-chhcccccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEccCCC--CccccH
Confidence            999999 666555431  0126788999999987 9999999999997799999999997 99999997543  456788


Q ss_pred             HHHHhcCcEEEEeeccCCCccccHHHHHHHHHcCCc--ccceeccc
Q 018022          317 FEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWS--YVPFSGTR  360 (362)
Q Consensus       317 ~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l--~~~~~~~~  360 (362)
                      ..++.|++++.|++.+    .++++++++++++|++  ++.++.+|
T Consensus       294 ~~~~~~~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~  335 (363)
T 3m6i_A          294 MRASVREVDLQFQYRY----CNTWPRAIRLVENGLVDLTRLVTHRF  335 (363)
T ss_dssp             HHHHHHTCEEEECCSC----SSCHHHHHHHHHTTSSCCGGGEEEEE
T ss_pred             HHHHhcCcEEEEccCC----HHHHHHHHHHHHhCCCChHHceeeee
Confidence            8899999999998654    5899999999999999  44465554

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=7.2e-54  Score=408.44  Aligned_cols=313  Identities=25%  Similarity=0.378  Sum_probs=276.1

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC--CCCCccccccceEEEEEeCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP--AVFPRILGHEAIGVVESVGENVDGVVE   94 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~--~~~p~~~G~e~~G~Vv~vG~~v~~~~~   94 (362)
                      |||+++++++++++++++|.|+|+++||||||.+++||++|++.+.|..+.  ..+|.++|||++|+|+++|++|++|++
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v   80 (345)
T 3jv7_A            1 MKAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGV   80 (345)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEcCCCCceEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCCCC
Confidence            899999999988999999999999999999999999999999999987543  568999999999999999999999999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCCCC-CCCCC-CCCCCCCCCCccccccCCceecccccccceeeeEEee-cCceEEcC
Q 018022           95 GDVVIPHFLADCTECVGCRSKKGNLCS-AFPFK-ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLD-IAHVVKVD  171 (362)
Q Consensus        95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~-~~~~~-~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~-~~~~~~~P  171 (362)
                      ||||++.+..+|+.|.+|+.+++++|. +..+. ...|...+|                   +|+||+++| .+.++++|
T Consensus        81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G-------------------~~aey~~v~~~~~~~~~p  141 (345)
T 3jv7_A           81 GDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPG-------------------SMAEYMIVDSARHLVPIG  141 (345)
T ss_dssp             TCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCC-------------------SSBSEEEESCGGGEEECT
T ss_pred             CCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCc-------------------eeeEEEEecchhceEeCC
Confidence            999999999999999999999999994 32221 012333344                   999999999 99999999


Q ss_pred             CCCCccchhccccchhhhHHHHHH-hcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE
Q 018022          172 PTVPPNRACLLSCGVSTGVGAAWR-TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF  250 (362)
Q Consensus       172 ~~l~~~~aa~~~~~~~ta~~~l~~-~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v  250 (362)
                      + +++++||.+++++.|||+++.+ ..++++|++|||+|+|++|++++|+|+++|..+|++++++++|+++++++|++++
T Consensus       142 ~-~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~  220 (345)
T 3jv7_A          142 D-LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAA  220 (345)
T ss_dssp             T-CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEE
T ss_pred             C-CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEE
Confidence            9 9999999999999999998766 4589999999999999999999999999954499999999999999999999999


Q ss_pred             EcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 018022          251 VNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS  329 (362)
Q Consensus       251 v~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  329 (362)
                      +++++    ++.+.+++++++ ++|++||++|++..++.++++++++ |+++.+|.... ...++++ .++.+++++.|+
T Consensus       221 i~~~~----~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~-~~~~~~~~i~g~  293 (345)
T 3jv7_A          221 VKSGA----GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGIHAG-AHAKVGF-FMIPFGASVVTP  293 (345)
T ss_dssp             EECST----THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEE-EEEEECSCCTT-CCEEEST-TTSCTTCEEECC
T ss_pred             EcCCC----cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcC-CEEEEECCCCC-CCCCcCH-HHHhCCCEEEEE
Confidence            99764    688999999988 9999999999997799999999998 99999998543 2456665 778899999998


Q ss_pred             eccCCCccccHHHHHHHHHcCCcccceeccc
Q 018022          330 LFGGLKAKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       330 ~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      +++.   +++++++++++++|++++.+ .+|
T Consensus       294 ~~~~---~~~~~~~~~l~~~g~l~~~~-~~~  320 (345)
T 3jv7_A          294 YWGT---RSELMEVVALARAGRLDIHT-ETF  320 (345)
T ss_dssp             CSCC---HHHHHHHHHHHHTTCCCCCE-EEE
T ss_pred             ecCC---HHHHHHHHHHHHcCCCceEE-EEE
Confidence            7654   58899999999999999844 444

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.2e-53  Score=412.00  Aligned_cols=322  Identities=24%  Similarity=0.309  Sum_probs=280.3

Q ss_pred             ceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCC----
Q 018022           15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVD----   90 (362)
Q Consensus        15 ~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~----   90 (362)
                      .+|||+++.++++.++++++|.|+|+++||||||.+++||++|+..+.|.++...+|.++|||++|+|+++| +|+    
T Consensus        16 ~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~P~v~GhE~~G~V~~vG-~V~~~~~   94 (380)
T 1vj0_A           16 LKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVN-GEKRDLN   94 (380)
T ss_dssp             EEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEES-SCCBCTT
T ss_pred             hheEEEEEecCCCCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCCCCCCCcccCcCcEEEEEEeC-Ccccccc
Confidence            579999999999459999999999999999999999999999999999876545689999999999999999 999    


Q ss_pred             --CCCCCCEEEeeCCCCCCCCcccc-CCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEe-ecCc
Q 018022           91 --GVVEGDVVIPHFLADCTECVGCR-SKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVL-DIAH  166 (362)
Q Consensus        91 --~~~~Gd~V~~~~~~~~~~c~~c~-~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v-~~~~  166 (362)
                        +|++||||++.+..+|+.|.+|+ .+++++|++...   .|.....        +   ......|+|+||+++ |+++
T Consensus        95 ~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~---~g~~~~~--------~---~~~~~~G~~aey~~v~~~~~  160 (380)
T 1vj0_A           95 GELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKV---YGINRGC--------S---EYPHLRGCYSSHIVLDPETD  160 (380)
T ss_dssp             SCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEE---TTTTCCS--------S---STTCCCSSSBSEEEECTTCC
T ss_pred             CCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcce---ecccccc--------C---CCCCCCccccceEEEcccce
Confidence              99999999999999999999999 999999987654   2320000        0   000112499999999 9999


Q ss_pred             eEEcCCCCCcc-chhccccchhhhHHHHHHhcC-CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh
Q 018022          167 VVKVDPTVPPN-RACLLSCGVSTGVGAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR  244 (362)
Q Consensus       167 ~~~~P~~l~~~-~aa~~~~~~~ta~~~l~~~~~-~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~  244 (362)
                      ++++|++++++ +|++++ +++|||+++ +.++ +++|++|||+|+|++|++++|+|+.+|+.+|++++++++|++++++
T Consensus       161 ~~~iP~~l~~~~~Aa~~~-~~~ta~~al-~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~  238 (380)
T 1vj0_A          161 VLKVSEKDDLDVLAMAMC-SGATAYHAF-DEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE  238 (380)
T ss_dssp             EEEECTTSCHHHHHHHTT-HHHHHHHHH-HTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH
T ss_pred             EEECCCCCChHHhHhhhc-HHHHHHHHH-HhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH
Confidence            99999999999 777777 999999987 6788 9999999999999999999999999994499999999999999999


Q ss_pred             cCCcEEEcCC---CCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHH-H
Q 018022          245 FGVTEFVNSK---NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFE-V  319 (362)
Q Consensus       245 ~g~~~vv~~~---~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~-~  319 (362)
                      +|++++++++   +   .++.+.+++++++ ++|+|||++|.+..++.++++++++ |+++.+|........++++.. +
T Consensus       239 lGa~~vi~~~~~~~---~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~  314 (380)
T 1vj0_A          239 IGADLTLNRRETSV---EERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWL  314 (380)
T ss_dssp             TTCSEEEETTTSCH---HHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCCCCEEECHHHHT
T ss_pred             cCCcEEEeccccCc---chHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCCCeeEchHHHH
Confidence            9999999987   5   6788899999888 9999999999877799999999998 999999985412246788887 8


Q ss_pred             HhcCcEEEEeeccCCCccccHHHHHHHHHc--CCcccceeccc
Q 018022          320 LHSGKILMGSLFGGLKAKSDIPILLKRYMD--KWSYVPFSGTR  360 (362)
Q Consensus       320 ~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~--g~l~~~~~~~~  360 (362)
                      +.|++++.|++.+.   +++++++++++++  |+|++.++.+|
T Consensus       315 ~~~~~~i~g~~~~~---~~~~~~~~~l~~~~~g~l~~~i~~~~  354 (380)
T 1vj0_A          315 VLKNATFKGIWVSD---TSHFVKTVSITSRNYQLLSKLITHRL  354 (380)
T ss_dssp             TTTTCEEEECCCCC---HHHHHHHHHHHHTCHHHHGGGCCEEE
T ss_pred             HhCCeEEEEeecCC---HHHHHHHHHHHHhhcCCeeeEEEEEE
Confidence            88999999987653   5889999999999  99988887665

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.2e-53  Score=404.29  Aligned_cols=312  Identities=24%  Similarity=0.360  Sum_probs=272.1

Q ss_pred             cceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcC-CC--CCCCCccccccceEEEEEeCCCCC
Q 018022           14 PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK-DF--PAVFPRILGHEAIGVVESVGENVD   90 (362)
Q Consensus        14 ~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~-~~--~~~~p~~~G~e~~G~Vv~vG~~v~   90 (362)
                      +++|||+++.+++. ++++++|.|+|+++||+|||.+++||++|++.+.+. ..  ...+|.++|||++|+|+++|++|+
T Consensus         2 ~~~mka~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~   80 (352)
T 1e3j_A            2 ASDNLSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVK   80 (352)
T ss_dssp             --CCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCC
T ss_pred             cccCEEEEEEcCCc-EEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCC
Confidence            45699999999876 999999999999999999999999999999988743 22  135799999999999999999999


Q ss_pred             CCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeecCceEE
Q 018022           91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (362)
Q Consensus        91 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~  169 (362)
                      +|++||||++.+..+|+.|.+|+.+++++|++..+   .|.. .+|                   +|+||+++|++++++
T Consensus        81 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~G-------------------~~aey~~v~~~~~~~  138 (352)
T 1e3j_A           81 HLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTF---CATPPDDG-------------------NLARYYVHAADFCHK  138 (352)
T ss_dssp             SCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEE---TTBTTBCC-------------------SCBSEEEEEGGGEEE
T ss_pred             CCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcc---cCcCCCCc-------------------cceeEEEeChHHeEE
Confidence            99999999999999999999999999999998765   3332 234                   999999999999999


Q ss_pred             cCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE
Q 018022          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE  249 (362)
Q Consensus       170 ~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~  249 (362)
                      +|+++++++||++. +++|||+++ +.+++++|++|||+|+|++|++++|+|+++|+ +|++++++++|+++++++|+++
T Consensus       139 iP~~~~~~~aa~~~-~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~  215 (352)
T 1e3j_A          139 LPDNVSLEEGALLE-PLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADV  215 (352)
T ss_dssp             CCTTSCHHHHHTHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSE
T ss_pred             CcCCCCHHHHHhhc-hHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCE
Confidence            99999999999764 788999987 78899999999999999999999999999999 6999999999999999999999


Q ss_pred             EEcCCCCCCccHHHHHHhhcC---C-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcE
Q 018022          250 FVNSKNCGDKSVSQIIIDMTD---G-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKI  325 (362)
Q Consensus       250 vv~~~~~~~~~~~~~i~~~~~---~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~  325 (362)
                      ++++++  ..++.+.+++.++   + ++|++||++|....++.++++++++ |+++.+|...  ...++++..++.|+++
T Consensus       216 ~~~~~~--~~~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~~~~~  290 (352)
T 1e3j_A          216 TLVVDP--AKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGS--QMVTVPLVNACAREID  290 (352)
T ss_dssp             EEECCT--TTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCS--SCCCCCHHHHHTTTCE
T ss_pred             EEcCcc--cccHHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC--CCccccHHHHHhcCcE
Confidence            998762  1466778887775   4 8999999999987789999999997 9999999743  3456788889999999


Q ss_pred             EEEeeccCCCccccHHHHHHHHHcCCcc--cceeccc
Q 018022          326 LMGSLFGGLKAKSDIPILLKRYMDKWSY--VPFSGTR  360 (362)
Q Consensus       326 i~g~~~~~~~~~~~l~~~l~~~~~g~l~--~~~~~~~  360 (362)
                      +.|++.+    +++++++++++++|+++  +.++.+|
T Consensus       291 i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~  323 (352)
T 1e3j_A          291 IKSVFRY----CNDYPIALEMVASGRCNVKQLVTHSF  323 (352)
T ss_dssp             EEECCSC----SSCHHHHHHHHHTTSCCCGGGEEEEE
T ss_pred             EEEeccc----hHHHHHHHHHHHcCCCChHHheeEEe
Confidence            9998643    47899999999999975  4555544

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=4e-53  Score=403.17  Aligned_cols=309  Identities=25%  Similarity=0.376  Sum_probs=268.2

Q ss_pred             cceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCC--CCCCCccccccceEEEEEeCCCCCC
Q 018022           14 PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF--PAVFPRILGHEAIGVVESVGENVDG   91 (362)
Q Consensus        14 ~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~--~~~~p~~~G~e~~G~Vv~vG~~v~~   91 (362)
                      |.+|||+++.+++++++++++|.|+|+++||+|||.+++||++|++.+.|..+  ...+|.++|||++|+|+++|++ ++
T Consensus         1 m~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~   79 (344)
T 2h6e_A            1 MVKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AK   79 (344)
T ss_dssp             CEEEEBCEECSCCC-----EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CC
T ss_pred             CceeEEEEEecCCCCCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CC
Confidence            35799999999986699999999999999999999999999999999998765  3468999999999999999999 99


Q ss_pred             CCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEee-cCceEEc
Q 018022           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLD-IAHVVKV  170 (362)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~-~~~~~~~  170 (362)
                      |++||||+..+..+|++|.+|+.+++++|++...   .|...+|                   +|+||+++| +++++++
T Consensus        80 ~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~~~G-------------------~~aey~~v~~~~~~~~i  137 (344)
T 2h6e_A           80 VKKGDNVVVYATWGDLTCRYCREGKFNICKNQII---PGQTTNG-------------------GFSEYMLVKSSRWLVKL  137 (344)
T ss_dssp             CCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBC---BTTTBCC-------------------SSBSEEEESCGGGEEEE
T ss_pred             CCCCCEEEECCCCCCCCChhhhCCCcccCCCccc---cccccCC-------------------cceeeEEecCcccEEEe
Confidence            9999999999999999999999999999987654   4544455                   999999999 9999999


Q ss_pred             CCCCCccchhccccchhhhHHHHHHh----cCCCCCCEEEEECCChHHHHHHHHHHHc--CCCEEEEEcCCchHHHHHHh
Q 018022          171 DPTVPPNRACLLSCGVSTGVGAAWRT----ANVEVGSTVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISEKFEIGKR  244 (362)
Q Consensus       171 P~~l~~~~aa~~~~~~~ta~~~l~~~----~~~~~g~~vlI~Gag~~G~~a~~la~~~--g~~~vi~~~~~~~~~~~~~~  244 (362)
                       +++++++||.+++++.|||+++...    .++ +|++|||+|+|++|++++|+|+++  |+ +|++++++++|++++++
T Consensus       138 -~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~  214 (344)
T 2h6e_A          138 -NSLSPVEAAPLADAGTTSMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALE  214 (344)
T ss_dssp             -SSSCHHHHGGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHH
T ss_pred             -CCCCHHHhhhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHH
Confidence             9999999999999999999987554    288 999999999999999999999999  99 89999999999999999


Q ss_pred             cCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcC
Q 018022          245 FGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSG  323 (362)
Q Consensus       245 ~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~  323 (362)
                      +|+++++++++   .  .+.+.+++++ ++|++||++|.+..++.++++++++ |+++.+|....  ..++++..++.|+
T Consensus       215 lGa~~vi~~~~---~--~~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~--~~~~~~~~~~~~~  286 (344)
T 2h6e_A          215 LGADYVSEMKD---A--ESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGMEGK--RVSLEAFDTAVWN  286 (344)
T ss_dssp             HTCSEEECHHH---H--HHHHHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSS--CCCCCHHHHHHTT
T ss_pred             hCCCEEecccc---c--hHHHHHhhcCCCccEEEECCCChHHHHHHHHHhhcC-CEEEEeCCCCC--CcccCHHHHhhCC
Confidence            99999998642   1  2234455556 8999999999987799999999998 99999998542  3577888888999


Q ss_pred             cEEEEeeccCCCccccHHHHHHHHHcCCcccceeccc
Q 018022          324 KILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       324 ~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      +++.|++.+.   +++++++++++++|+|++.+ .+|
T Consensus       287 ~~i~g~~~~~---~~~~~~~~~l~~~g~i~~~i-~~~  319 (344)
T 2h6e_A          287 KKLLGSNYGS---LNDLEDVVRLSESGKIKPYI-IKV  319 (344)
T ss_dssp             CEEEECCSCC---HHHHHHHHHHHHTTSSCCCE-EEE
T ss_pred             cEEEEEecCC---HHHHHHHHHHHHcCCCCcce-EEE
Confidence            9999986543   58899999999999999987 655

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=9.5e-54  Score=408.11  Aligned_cols=313  Identities=19%  Similarity=0.297  Sum_probs=268.0

Q ss_pred             CcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCC
Q 018022           13 KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGV   92 (362)
Q Consensus        13 ~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~   92 (362)
                      |+|+|||+++.+++++++++++|.|+|+++||||||.+++||++|++.+.|..+...+|.++|||++|+|+++|++|++|
T Consensus         1 M~m~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~V~~vG~~v~~~   80 (348)
T 3two_A            1 MRVQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEIAGIIKEVGKGVKKF   80 (348)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSCCCSSBCCCCCEEEEEEEECTTCCSC
T ss_pred             CceEEEEEEEccCCCCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCC
Confidence            34789999999998779999999999999999999999999999999999987777889999999999999999999999


Q ss_pred             CCCCEEEeeCC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 018022           93 VEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (362)
Q Consensus        93 ~~Gd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P  171 (362)
                      ++||||++.+. .+|++|.+|+.+++++|. ...   .++..+....    .     .....|+|+||+++|+++++++|
T Consensus        81 ~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~-~~~---~~~~~~~~~~----~-----~~~~~G~~aey~~v~~~~~~~iP  147 (348)
T 3two_A           81 KIGDVVGVGCFVNSCKACKPCKEHQEQFCT-KVV---FTYDCLDSFH----D-----NEPHMGGYSNNIVVDENYVISVD  147 (348)
T ss_dssp             CTTCEEEECSEEECCSCSHHHHTTCGGGCT-TCE---ESSSSEEGGG----T-----TEECCCSSBSEEEEEGGGCEECC
T ss_pred             CCCCEEEEeCCcCCCCCChhHhCCCcccCc-ccc---cccccccccc----c-----CCcCCccccceEEechhhEEECC
Confidence            99999998664 789999999999999998 322   2222210000    0     01112599999999999999999


Q ss_pred             CCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE
Q 018022          172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV  251 (362)
Q Consensus       172 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv  251 (362)
                      +++++++||.+++++.|||+++ +..++++|++|||+|+|++|++++|+|+++|+ +|++++++++|+++++++|+++++
T Consensus       148 ~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~  225 (348)
T 3two_A          148 KNAPLEKVAPLLCAGITTYSPL-KFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY  225 (348)
T ss_dssp             TTSCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHTTCSEEE
T ss_pred             CCCCHHHhhhhhhhHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCeec
Confidence            9999999999999999999986 55699999999999999999999999999999 999999999999999999999988


Q ss_pred             cCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccc-cCHHHHH-hcCcEEEEe
Q 018022          252 NSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLS-LSSFEVL-HSGKILMGS  329 (362)
Q Consensus       252 ~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~-~~~~~~~-~~~~~i~g~  329 (362)
                       .+.   +.+        ..++|++||++|++..++.++++++++ |+++.+|.... ...+ +++..++ .|++++.|+
T Consensus       226 -~~~---~~~--------~~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~i~g~  291 (348)
T 3two_A          226 -TDP---KQC--------KEELDFIISTIPTHYDLKDYLKLLTYN-GDLALVGLPPV-EVAPVLSVFDFIHLGNRKVYGS  291 (348)
T ss_dssp             -SSG---GGC--------CSCEEEEEECCCSCCCHHHHHTTEEEE-EEEEECCCCCG-GGCCEEEHHHHHHTCSCEEEEC
T ss_pred             -CCH---HHH--------hcCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECCCCC-CCcccCCHHHHHhhCCeEEEEE
Confidence             332   221        117999999999986699999999998 99999997531 2334 7777777 899999999


Q ss_pred             eccCCCccccHHHHHHHHHcCCccccee
Q 018022          330 LFGGLKAKSDIPILLKRYMDKWSYVPFS  357 (362)
Q Consensus       330 ~~~~~~~~~~l~~~l~~~~~g~l~~~~~  357 (362)
                      +.+.   .++++++++++++|+|++.++
T Consensus       292 ~~~~---~~~~~~~~~l~~~g~l~~~~~  316 (348)
T 3two_A          292 LIGG---IKETQEMVDFSIKHNIYPEID  316 (348)
T ss_dssp             CSCC---HHHHHHHHHHHHHTTCCCCEE
T ss_pred             ecCC---HHHHHHHHHHHHhCCCCceEE
Confidence            7654   478999999999999999763

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=6.1e-53  Score=401.14  Aligned_cols=306  Identities=26%  Similarity=0.388  Sum_probs=275.4

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVEG   95 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~~G   95 (362)
                      |||+++.+++++++++++|.|+|+++||+|||.+++||++|++.+.|..+. ..+|.++|||++|+|+++|++|++|++|
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~vG   80 (339)
T 1rjw_A            1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVG   80 (339)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEECCCCCcCCCC
Confidence            799999999856999999999999999999999999999999999887653 4679999999999999999999999999


Q ss_pred             CEEEeeCCC-CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022           96 DVVIPHFLA-DCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (362)
Q Consensus        96 d~V~~~~~~-~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l  174 (362)
                      |||++.+.. .|+.|.+|+.+++++|++...   .|...+|                   +|+||+++|+++++++|+++
T Consensus        81 drV~~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~~P~~~  138 (339)
T 1rjw_A           81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKN---AGYSVDG-------------------GYAEYCRAAADYVVKIPDNL  138 (339)
T ss_dssp             CEEEECSEEECCSCSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEEEGGGCEECCTTS
T ss_pred             CEEEEecCCCCCCCCchhhCcCcccCCCcce---eecCCCC-------------------cceeeEEechHHEEECCCCC
Confidence            999987754 599999999999999987764   4444455                   99999999999999999999


Q ss_pred             CccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  254 (362)
Q Consensus       175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~  254 (362)
                      ++++||.+++++.|||+++.+ .++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|+++++++.
T Consensus       139 ~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~d~~  216 (339)
T 1rjw_A          139 SFEEAAPIFCAGVTTYKALKV-TGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPL  216 (339)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHH-HTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTT
T ss_pred             CHHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEecCC
Confidence            999999999999999998754 589999999999998899999999999999 999999999999999999999999987


Q ss_pred             CCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCC
Q 018022          255 NCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL  334 (362)
Q Consensus       255 ~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  334 (362)
                      +   .++.+.+++.+ +++|++||++|.+..++.+++.++++ |+++.+|....  ..++++..++.|++++.|++.+. 
T Consensus       217 ~---~~~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~-  288 (339)
T 1rjw_A          217 K---EDAAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPE--EMPIPIFDTVLNGIKIIGSIVGT-  288 (339)
T ss_dssp             T---SCHHHHHHHHH-SSEEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSS--EEEEEHHHHHHTTCEEEECCSCC-
T ss_pred             C---ccHHHHHHHHh-CCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCC--CCccCHHHHHhCCcEEEEeccCC-
Confidence            6   67888888877 58999999999977799999999998 99999998542  36788888889999999986543 


Q ss_pred             CccccHHHHHHHHHcCCcccce
Q 018022          335 KAKSDIPILLKRYMDKWSYVPF  356 (362)
Q Consensus       335 ~~~~~l~~~l~~~~~g~l~~~~  356 (362)
                        .++++++++++++|++++.+
T Consensus       289 --~~~~~~~~~l~~~g~l~~~~  308 (339)
T 1rjw_A          289 --RKDLQEALQFAAEGKVKTII  308 (339)
T ss_dssp             --HHHHHHHHHHHHTTSCCCCE
T ss_pred             --HHHHHHHHHHHHcCCCCccE
Confidence              57899999999999999864

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=3.4e-53  Score=403.54  Aligned_cols=312  Identities=25%  Similarity=0.363  Sum_probs=279.9

Q ss_pred             eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 018022           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV   93 (362)
Q Consensus        17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~   93 (362)
                      |||+++.+++.+  |+++++|.|+|+++||||||.+++||++|++++.|.++. ..+|.++|||++|+|+++|++|++|+
T Consensus         1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2eih_A            1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFA   80 (343)
T ss_dssp             CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEECSSCCSCC
T ss_pred             CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEECCCCCCCC
Confidence            799999999865  899999999999999999999999999999999887654 46899999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      +||||++.+..+|+.|.+|+.+++++|++...   .|...+|                   +|+||+++|++.++++|++
T Consensus        81 vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~---~G~~~~G-------------------~~aey~~v~~~~~~~~P~~  138 (343)
T 2eih_A           81 PGDEVVINPGLSCGRCERCLAGEDNLCPRYQI---LGEHRHG-------------------TYAEYVVLPEANLAPKPKN  138 (343)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCTTCEE---TTTSSCC-------------------SSBSEEEEEGGGEEECCTT
T ss_pred             CCCEEEECCCCCcccchhhccCcccccccccc---cCcCCCc-------------------cceeEEEeChHHeEECCCC
Confidence            99999999999999999999999999998765   4544455                   9999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN  252 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~  252 (362)
                      +++++|+++++++.|||+++.+.+++++|++|||+|+ |++|++++|+++.+|+ +|+++++++++++.++++|++++++
T Consensus       139 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga~~~~d  217 (343)
T 2eih_A          139 LSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVN  217 (343)
T ss_dssp             SCHHHHHHSHHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHhhchhhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEc
Confidence            9999999888899999998766679999999999998 9999999999999999 9999999999999999999999999


Q ss_pred             CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022          253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF  331 (362)
Q Consensus       253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  331 (362)
                      +.+   .++.+.+++.+++ ++|++||++| ...++.+++.++++ |+++.+|..... ...+++..++.|++++.|++.
T Consensus       218 ~~~---~~~~~~~~~~~~~~~~d~vi~~~g-~~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~  291 (343)
T 2eih_A          218 YTH---PDWPKEVRRLTGGKGADKVVDHTG-ALYFEGVIKATANG-GRIAIAGASSGY-EGTLPFAHVFYRQLSILGSTM  291 (343)
T ss_dssp             TTS---TTHHHHHHHHTTTTCEEEEEESSC-SSSHHHHHHHEEEE-EEEEESSCCCSC-CCCCCTTHHHHTTCEEEECCS
T ss_pred             CCc---ccHHHHHHHHhCCCCceEEEECCC-HHHHHHHHHhhccC-CEEEEEecCCCC-cCccCHHHHHhCCcEEEEecC
Confidence            877   6788888888876 8999999999 45589999999998 999999975432 334677778889999999864


Q ss_pred             cCCCccccHHHHHHHHHcCCcccceeccc
Q 018022          332 GGLKAKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       332 ~~~~~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      +   ..++++++++++++|++++.++.+|
T Consensus       292 ~---~~~~~~~~~~l~~~g~l~~~i~~~~  317 (343)
T 2eih_A          292 A---SKSRLFPILRFVEEGKLKPVVGQVL  317 (343)
T ss_dssp             C---CGGGHHHHHHHHHHTSSCCCEEEEE
T ss_pred             c---cHHHHHHHHHHHHcCCCCCceeEEe
Confidence            3   2688999999999999999887765

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=1.5e-53  Score=405.93  Aligned_cols=311  Identities=23%  Similarity=0.335  Sum_probs=276.9

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCC---CCCCCccccccceEEEEEeCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENVDGVV   93 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~---~~~~p~~~G~e~~G~Vv~vG~~v~~~~   93 (362)
                      |||+++.+++++++++++|.|+|+++||+|||.+++||++|++++.|..+   ...+|.++|||++|+|+++|++|++|+
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2dq4_A            1 MRALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQ   80 (343)
T ss_dssp             CEEEEECSSSSSCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCSSC
T ss_pred             CeEEEEeCCCCcEEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCcCC
Confidence            79999999987799999999999999999999999999999999988654   356799999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      +||||++.+..+|++|.+|+.+++++|++...   .|...+|                   +|+||+++|+++++++|++
T Consensus        81 vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~iP~~  138 (343)
T 2dq4_A           81 VGDHVSLESHIVCHACPACRTGNYHVCLNTQI---LGVDRDG-------------------GFAEYVVVPAENAWVNPKD  138 (343)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEEEGGGEEEECTT
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCCCcce---ecCCCCC-------------------cceeEEEEchHHeEECCCC
Confidence            99999999999999999999999999998764   3444445                   9999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  253 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~  253 (362)
                      +++++|+++. ++.|||+++.+.+++ +|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++ +++++++
T Consensus       139 ~~~~~aa~~~-~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~  215 (343)
T 2dq4_A          139 LPFEVAAILE-PFGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNP  215 (343)
T ss_dssp             SCHHHHTTHH-HHHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECT
T ss_pred             CCHHHHHhhh-HHHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCc
Confidence            9999999875 778999987547889 999999999999999999999999987899999999999999999 9999998


Q ss_pred             CCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCH-HHHHhcCcEEEEeecc
Q 018022          254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS-FEVLHSGKILMGSLFG  332 (362)
Q Consensus       254 ~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~~~i~g~~~~  332 (362)
                      ++   +++.+.++++++.++|++||++|.+..++.+++.++++ |+++.+|...  ...++++ ..++.|++++.|++.+
T Consensus       216 ~~---~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~--~~~~~~~~~~~~~~~~~i~g~~~~  289 (343)
T 2dq4_A          216 LE---EDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIPS--DPIRFDLAGELVMRGITAFGIAGR  289 (343)
T ss_dssp             TT---SCHHHHHHHHHSSCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCS--SCEEECHHHHTGGGTCEEEECCSC
T ss_pred             Cc---cCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC--CCceeCcHHHHHhCceEEEEeecC
Confidence            87   78899999888339999999999977799999999998 9999999843  3467888 7888999999998654


Q ss_pred             CCCccccHHHHHHHHHcCCc--ccceeccc
Q 018022          333 GLKAKSDIPILLKRYMDKWS--YVPFSGTR  360 (362)
Q Consensus       333 ~~~~~~~l~~~l~~~~~g~l--~~~~~~~~  360 (362)
                      .  ..++++++++++++|++  ++.++.+|
T Consensus       290 ~--~~~~~~~~~~l~~~g~~~~~~~i~~~~  317 (343)
T 2dq4_A          290 R--LWQTWMQGTALVYSGRVDLSPLLTHRL  317 (343)
T ss_dssp             C--TTHHHHHHHHHHHHTSSCCGGGEEEEE
T ss_pred             C--CHHHHHHHHHHHHcCCCChHHheeEEe
Confidence            2  25889999999999995  56666554

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.5e-52  Score=399.77  Aligned_cols=314  Identities=23%  Similarity=0.372  Sum_probs=278.8

Q ss_pred             CcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCC
Q 018022           13 KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDG   91 (362)
Q Consensus        13 ~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~   91 (362)
                      +|.+|||+++.+++.+++++++|.|+|+++||+|||.+++||++|++++.|..+. ..+|.++|||++|+|+++|++|++
T Consensus         2 ~p~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   81 (347)
T 2hcy_A            2 IPETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKG   81 (347)
T ss_dssp             CCSEEEEEEESSTTCCCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEEEECTTCCS
T ss_pred             CCcccEEEEEeCCCCCCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEEEECCCCCC
Confidence            5678999999999856999999999999999999999999999999999887653 467999999999999999999999


Q ss_pred             CCCCCEEEeeCCC-CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEc
Q 018022           92 VVEGDVVIPHFLA-DCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV  170 (362)
Q Consensus        92 ~~~Gd~V~~~~~~-~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~  170 (362)
                      |++||||++.+.. .|+.|.+|+.+++++|++...   .|...+|                   +|+||+++|+++++++
T Consensus        82 ~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~i  139 (347)
T 2hcy_A           82 WKIGDYAGIKWLNGSCMACEYCELGNESNCPHADL---SGYTHDG-------------------SFQQYATADAVQAAHI  139 (347)
T ss_dssp             CCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEEETTTSEEE
T ss_pred             CcCCCEEEEecCCCCCCCChhhhCCCcccCccccc---cccCCCC-------------------cceeEEEeccccEEEC
Confidence            9999999987754 599999999999999997764   4444455                   9999999999999999


Q ss_pred             CCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE
Q 018022          171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE  249 (362)
Q Consensus       171 P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~  249 (362)
                      |+++++++||.+++++.|||+++ ...++++|++|||+|+ |++|++++++++..|+ +|+++++++++++.++++|+++
T Consensus       140 P~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g~~~  217 (347)
T 2hcy_A          140 PQGTDLAQVAPILCAGITVYKAL-KSANLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEV  217 (347)
T ss_dssp             CTTCCHHHHGGGGTHHHHHHHHH-HTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHTTCCE
T ss_pred             CCCCCHHHHHHHhhhHHHHHHHH-HhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHcCCce
Confidence            99999999999999999999986 4558999999999998 9999999999999999 9999999999999999999999


Q ss_pred             EEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 018022          250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS  329 (362)
Q Consensus       250 vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  329 (362)
                      ++|..+  .+++.+.+++.+.+++|++||++|....++.+++.++++ |+++.+|... ....++++..++.|++++.|+
T Consensus       218 ~~d~~~--~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~~~-~~~~~~~~~~~~~~~~~i~g~  293 (347)
T 2hcy_A          218 FIDFTK--EKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRAN-GTTVLVGMPA-GAKCCSDVFNQVVKSISIVGS  293 (347)
T ss_dssp             EEETTT--CSCHHHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEE-EEEEECCCCT-TCEEEEEHHHHHHTTCEEEEC
T ss_pred             EEecCc--cHhHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEeCCC-CCCCCCCHHHHhhCCcEEEEc
Confidence            998763  267888888877658999999999977799999999998 9999999853 234678888888999999998


Q ss_pred             eccCCCccccHHHHHHHHHcCCccccee
Q 018022          330 LFGGLKAKSDIPILLKRYMDKWSYVPFS  357 (362)
Q Consensus       330 ~~~~~~~~~~l~~~l~~~~~g~l~~~~~  357 (362)
                      +.+.   .++++++++++++|+|++.++
T Consensus       294 ~~~~---~~~~~~~~~l~~~g~l~~~~~  318 (347)
T 2hcy_A          294 YVGN---RADTREALDFFARGLVKSPIK  318 (347)
T ss_dssp             CCCC---HHHHHHHHHHHHTTSCCCCEE
T ss_pred             cCCC---HHHHHHHHHHHHhCCCccceE
Confidence            6543   578999999999999998653

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=2.9e-52  Score=400.10  Aligned_cols=312  Identities=21%  Similarity=0.192  Sum_probs=276.0

Q ss_pred             CcceeeEEEeccCC-CceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCC
Q 018022           13 KPIQCRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVD   90 (362)
Q Consensus        13 ~~~~~ka~~~~~~~-~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~   90 (362)
                      +|.+|||+++.+++ +.++++++|.|+|+++||||||.+++||++|+.++.|.++. .++|.++|||++|+|+++|++|+
T Consensus        24 m~~~mkA~~~~~~~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~vG~~v~  103 (363)
T 3uog_A           24 MSKWMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSVT  103 (363)
T ss_dssp             CCSEEEEEEBSCTTTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             CchhhEEEEEccCCCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEEECCCCC
Confidence            56779999999764 33999999999999999999999999999999999987753 57899999999999999999999


Q ss_pred             CCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCC-CCCCCCCCccccccCCceecccccccceeeeEEeecCceEE
Q 018022           91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKIS-PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (362)
Q Consensus        91 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~-~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~  169 (362)
                      +|++||||++.+..      .|..+. +.|.+...... .|...+|                   +|+||+++|++++++
T Consensus       104 ~~~vGDrV~~~~~~------~c~~g~-~~c~~~~~~~~~~g~~~~G-------------------~~aey~~v~~~~~~~  157 (363)
T 3uog_A          104 RFRPGDRVISTFAP------GWLDGL-RPGTGRTPAYETLGGAHPG-------------------VLSEYVVLPEGWFVA  157 (363)
T ss_dssp             SCCTTCEEEECSST------TCCSSS-CCSCSSCCCCCCTTTTSCC-------------------CCBSEEEEEGGGEEE
T ss_pred             CCCCCCEEEEeccc------cccccc-cccccccccccccCcCCCC-------------------cceeEEEechHHeEE
Confidence            99999999987654      567777 88875332211 3444455                   999999999999999


Q ss_pred             cCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE
Q 018022          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE  249 (362)
Q Consensus       170 ~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~  249 (362)
                      +|+++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+ +|++++++++|+++++++|+++
T Consensus       158 iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~  236 (363)
T 3uog_A          158 APKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADH  236 (363)
T ss_dssp             CCTTSCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSE
T ss_pred             CCCCCCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCCCE
Confidence            999999999999999999999998788999999999999999999999999999999 9999999999999999999999


Q ss_pred             EEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEE
Q 018022          250 FVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMG  328 (362)
Q Consensus       250 vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g  328 (362)
                      +++.+.   +++.+.+++++++ ++|++|||+|... ++.++++++++ |+++.+|.... ...++++..++.|++++.|
T Consensus       237 vi~~~~---~~~~~~v~~~~~g~g~D~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~i~g  310 (363)
T 3uog_A          237 GINRLE---EDWVERVYALTGDRGADHILEIAGGAG-LGQSLKAVAPD-GRISVIGVLEG-FEVSGPVGPLLLKSPVVQG  310 (363)
T ss_dssp             EEETTT---SCHHHHHHHHHTTCCEEEEEEETTSSC-HHHHHHHEEEE-EEEEEECCCSS-CEECCBTTHHHHTCCEEEE
T ss_pred             EEcCCc---ccHHHHHHHHhCCCCceEEEECCChHH-HHHHHHHhhcC-CEEEEEecCCC-cccCcCHHHHHhCCcEEEE
Confidence            999554   7899999999988 9999999999654 89999999998 99999998543 3467788888999999999


Q ss_pred             eeccCCCccccHHHHHHHHHcCCcccceeccc
Q 018022          329 SLFGGLKAKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       329 ~~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      ++.+.   +++++++++++++|+|++.++.+|
T Consensus       311 ~~~~~---~~~~~~~~~l~~~g~l~~~i~~~~  339 (363)
T 3uog_A          311 ISVGH---RRALEDLVGAVDRLGLKPVIDMRY  339 (363)
T ss_dssp             CCCCC---HHHHHHHHHHHHHHTCCCCEEEEE
T ss_pred             EecCC---HHHHHHHHHHHHcCCCccceeeEE
Confidence            87653   589999999999999999988765

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=1.4e-53  Score=408.77  Aligned_cols=313  Identities=19%  Similarity=0.232  Sum_probs=270.0

Q ss_pred             CcceeeEEEeccCCCceEEEE--eecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCC
Q 018022           13 KPIQCRAAIATAPGEPLVIDE--VIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVD   90 (362)
Q Consensus        13 ~~~~~ka~~~~~~~~~l~l~~--~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~   90 (362)
                      +|++|||+++.+++.++++++  +|.|+|+++||||||.+++||++|++.+.|..+...+|.++|||++|+|+++|++|+
T Consensus         3 ~p~~mka~~~~~~~~~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~GhE~~G~V~~vG~~v~   82 (360)
T 1piw_A            3 YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSN   82 (360)
T ss_dssp             TTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTCC
T ss_pred             CChheEEEEEecCCCCeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCCCCCCcccCcCceEEEEEeCCCCC
Confidence            456799999999986699999  999999999999999999999999999998766567899999999999999999999


Q ss_pred             -CCCCCCEEEeeC-CCCCCCCccccCCCCCCCCCC-CCCCC---CCCCCCCCccccccCCceecccccccceeeeEEeec
Q 018022           91 -GVVEGDVVIPHF-LADCTECVGCRSKKGNLCSAF-PFKIS---PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI  164 (362)
Q Consensus        91 -~~~~Gd~V~~~~-~~~~~~c~~c~~~~~~~c~~~-~~~~~---~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~  164 (362)
                       +|++||||++.+ ..+|+.|.+|+.+++++|++. .....   .|...+                   |+|+||+++|+
T Consensus        83 ~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~-------------------G~~aey~~v~~  143 (360)
T 1piw_A           83 SGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQ-------------------GGYANYVRVHE  143 (360)
T ss_dssp             SSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCC-------------------CSSBSEEEEEG
T ss_pred             CCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCC-------------------CcceeEEEEch
Confidence             999999996554 578999999999999999875 11100   022233                   49999999999


Q ss_pred             CceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh
Q 018022          165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR  244 (362)
Q Consensus       165 ~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~  244 (362)
                      ++++++|+++++++||.+++++.|||+++.+ +++++|++|||+|+|++|++++|+|+++|+ +|++++++++|++++++
T Consensus       144 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~  221 (360)
T 1piw_A          144 HFVVPIPENIPSHLAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMK  221 (360)
T ss_dssp             GGEEECCTTSCHHHHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHH
T ss_pred             hheEECCCCCCHHHhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHH
Confidence            9999999999999999999999999998755 899999999999999999999999999999 89999999999999999


Q ss_pred             cCCcEEEcCCCCCCc-cHHHHHHhhcCCCccEEEEcCCC--HHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHh
Q 018022          245 FGVTEFVNSKNCGDK-SVSQIIIDMTDGGADYCFECVGL--ASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLH  321 (362)
Q Consensus       245 ~g~~~vv~~~~~~~~-~~~~~i~~~~~~g~d~vid~~g~--~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~  321 (362)
                      +|+++++++++   . ++.+.+.    +++|++||++|.  +..++.++++++++ |+++.+|.... . ..+++..++.
T Consensus       222 lGa~~v~~~~~---~~~~~~~~~----~~~D~vid~~g~~~~~~~~~~~~~l~~~-G~iv~~g~~~~-~-~~~~~~~~~~  291 (360)
T 1piw_A          222 MGADHYIATLE---EGDWGEKYF----DTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPEQ-H-EMLSLKPYGL  291 (360)
T ss_dssp             HTCSEEEEGGG---TSCHHHHSC----SCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCCS-S-CCEEECGGGC
T ss_pred             cCCCEEEcCcC---chHHHHHhh----cCCCEEEECCCCCcHHHHHHHHHHhcCC-CEEEEecCCCC-c-cccCHHHHHh
Confidence            99999999876   4 5655443    479999999998  66588999999998 99999998543 1 1455566788


Q ss_pred             cCcEEEEeeccCCCccccHHHHHHHHHcCCcccceeccc
Q 018022          322 SGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       322 ~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      |++++.|++.+.   .++++++++++++|+|++.+ .+|
T Consensus       292 ~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~i-~~~  326 (360)
T 1piw_A          292 KAVSISYSALGS---IKELNQLLKLVSEKDIKIWV-ETL  326 (360)
T ss_dssp             BSCEEEECCCCC---HHHHHHHHHHHHHTTCCCCE-EEE
T ss_pred             CCeEEEEEecCC---HHHHHHHHHHHHhCCCcceE-EEE
Confidence            999999986543   57899999999999999887 554

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=2.6e-52  Score=397.89  Aligned_cols=308  Identities=23%  Similarity=0.325  Sum_probs=278.1

Q ss_pred             eeEEEeccC-CCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022           17 CRAAIATAP-GEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (362)
Q Consensus        17 ~ka~~~~~~-~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G   95 (362)
                      |||+++... +..++++|+|.|+|+||||||||.++|||++|++++.|.++ .++|.++|||++|+|+++|++|++|++|
T Consensus         1 MKA~v~~~~~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~-~~~p~i~GhE~aG~V~~vG~~V~~~~~G   79 (348)
T 4eez_A            1 MKAAVVRHNPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFG-NKAGTVLGHEGIGIVKEIGADVSSLQVG   79 (348)
T ss_dssp             CEEEEECSSCCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTC-CCTTCBCCSEEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEEcCCCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCC-CCCCcccceeEEEEEEEECceeeecccC
Confidence            899999654 33499999999999999999999999999999999998765 4689999999999999999999999999


Q ss_pred             CEEEeeCCCC-CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022           96 DVVIPHFLAD-CTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (362)
Q Consensus        96 d~V~~~~~~~-~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l  174 (362)
                      |||++.+... |+.|.+|..+..+.|.+...   .+...+|                   +|+||+.+++++++++|+++
T Consensus        80 drV~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~G-------------------~~ae~~~~~~~~~~~iP~~~  137 (348)
T 4eez_A           80 DRVSVAWFFEGCGHCEYCVSGNETFCREVKN---AGYSVDG-------------------GMAEEAIVVADYAVKVPDGL  137 (348)
T ss_dssp             CEEEEESEEECCSSSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEEEGGGSCBCCTTS
T ss_pred             CeEeecccccccCccccccCCcccccccccc---cccccCC-------------------cceeeccccccceeecCCCC
Confidence            9998887554 67999999999999988776   4555566                   99999999999999999999


Q ss_pred             CccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  254 (362)
Q Consensus       175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~  254 (362)
                      ++++|+++++++.|||+++ +..++++|++|||+|+|++|++++|+|+.++..+||+++++++|+++++++|+++++|++
T Consensus       138 ~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~  216 (348)
T 4eez_A          138 DPIEASSITCAGVTTYKAI-KVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSG  216 (348)
T ss_dssp             CHHHHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-
T ss_pred             CHHHHhhcccceeeEEeee-cccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCC
Confidence            9999999999999999975 678999999999999999999999999977555999999999999999999999999998


Q ss_pred             CCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccC
Q 018022          255 NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG  333 (362)
Q Consensus       255 ~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  333 (362)
                      +   .++.+.+++++++ ++|.++|++++...+..+++.++++ |+++.+|...  ...++++..++.|++++.|++.++
T Consensus       217 ~---~~~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~i~gs~~~~  290 (348)
T 4eez_A          217 D---VNPVDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPM-GKMVAVAVPN--TEMTLSVPTVVFDGVEVAGSLVGT  290 (348)
T ss_dssp             C---CCHHHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEE-EEEEECCCCS--CEEEECHHHHHHSCCEEEECCSCC
T ss_pred             C---CCHHHHhhhhcCCCCceEEEEeccCcchhheeheeecCC-ceEEEEeccC--CCCccCHHHHHhCCeEEEEEecCC
Confidence            8   8899999999998 9999999999999899999999998 9999999753  456788889999999999997664


Q ss_pred             CCccccHHHHHHHHHcCCccccee
Q 018022          334 LKAKSDIPILLKRYMDKWSYVPFS  357 (362)
Q Consensus       334 ~~~~~~l~~~l~~~~~g~l~~~~~  357 (362)
                         +++++++++++++|+|+|.+.
T Consensus       291 ---~~~~~~~~~l~~~g~i~p~~~  311 (348)
T 4eez_A          291 ---RLDLAEAFQFGAEGKVKPIVA  311 (348)
T ss_dssp             ---HHHHHHHHHHHHTTSCCCCEE
T ss_pred             ---HHHHHHHHHHHHcCCCEEEEE
Confidence               588999999999999998653

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=3.5e-52  Score=397.16  Aligned_cols=310  Identities=25%  Similarity=0.347  Sum_probs=278.3

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCC--------CCCCCccccccceEEEEEeCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF--------PAVFPRILGHEAIGVVESVGEN   88 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~--------~~~~p~~~G~e~~G~Vv~vG~~   88 (362)
                      |||+++.+++++++++++|.|+|+++||+|||.+++||++|++++.|..+        ...+|.++|||++|+|+++|++
T Consensus         1 Mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   80 (347)
T 1jvb_A            1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (347)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEECCC
Confidence            79999999986699999999999999999999999999999999887654        3468999999999999999999


Q ss_pred             CCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec-Cce
Q 018022           89 VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI-AHV  167 (362)
Q Consensus        89 v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~-~~~  167 (362)
                      |++|++||||+..+..+|+.|.+|+.+++++|++...   .|...+|                   +|+||+++|+ +++
T Consensus        81 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~~~G-------------------~~aey~~v~~~~~~  138 (347)
T 1jvb_A           81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRW---LGINFDG-------------------AYAEYVIVPHYKYM  138 (347)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEE---BTTTBCC-------------------SSBSEEEESCGGGE
T ss_pred             CCCCCCCCEEEeCCCCCCCCChhhhCcCcccCccccc---ccccCCC-------------------cceeEEEecCccce
Confidence            9999999999999999999999999999999988754   4544455                   9999999999 999


Q ss_pred             EEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHc-CCCEEEEEcCCchHHHHHHhc
Q 018022          168 VKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRF  245 (362)
Q Consensus       168 ~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~  245 (362)
                      +++ +++++++|+.+++++.|||+++ +..++++|++|||+|+ |++|++++|+++.+ |+ +|+++++++++++.++++
T Consensus       139 ~~i-~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~  215 (347)
T 1jvb_A          139 YKL-RRLNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRA  215 (347)
T ss_dssp             EEC-SSSCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHH
T ss_pred             EEe-CCCCHHHcccchhhHHHHHHHH-HhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHh
Confidence            999 9999999999999999999987 5589999999999998 59999999999999 99 899999999999999999


Q ss_pred             CCcEEEcCCCCCCccHHHHHHhhcC-CCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCc
Q 018022          246 GVTEFVNSKNCGDKSVSQIIIDMTD-GGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGK  324 (362)
Q Consensus       246 g~~~vv~~~~~~~~~~~~~i~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~  324 (362)
                      |+++++++.+   .++.+.+.+++. +++|++||++|.+..++.+++.++++ |+++.+|.... .. ++++..++.|++
T Consensus       216 g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~-~~~~~~~~~~~~  289 (347)
T 1jvb_A          216 GADYVINASM---QDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGA-DL-HYHAPLITLSEI  289 (347)
T ss_dssp             TCSEEEETTT---SCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSCC-CC-CCCHHHHHHHTC
T ss_pred             CCCEEecCCC---ccHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcC-CEEEEECCCCC-CC-CCCHHHHHhCce
Confidence            9999999877   678888888876 48999999999987799999999998 99999998541 23 677778888999


Q ss_pred             EEEEeeccCCCccccHHHHHHHHHcCCcccceeccc
Q 018022          325 ILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       325 ~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      ++.|++.+.   +++++++++++++|+|++.++.+|
T Consensus       290 ~i~g~~~~~---~~~~~~~~~l~~~g~l~~~i~~~~  322 (347)
T 1jvb_A          290 QFVGSLVGN---QSDFLGIMRLAEAGKVKPMITKTM  322 (347)
T ss_dssp             EEEECCSCC---HHHHHHHHHHHHTTSSCCCCEEEE
T ss_pred             EEEEEeccC---HHHHHHHHHHHHcCCCCceEEEEE
Confidence            999986543   588999999999999999887765

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.1e-52  Score=401.81  Aligned_cols=315  Identities=20%  Similarity=0.305  Sum_probs=265.3

Q ss_pred             CCCCcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCC
Q 018022           10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV   89 (362)
Q Consensus        10 ~~~~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v   89 (362)
                      .....|+|||+++.++++.|+++++|.|+|+++||||||.+++||++|+..+.|..+...+|.++|||++|+|+++|++|
T Consensus        16 ~~~~~~~~~a~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V   95 (369)
T 1uuf_A           16 YKKAGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQV   95 (369)
T ss_dssp             -------CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTC
T ss_pred             hHhcCceEEEEEEcCCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCCCCCCeecccCceEEEEEECCCC
Confidence            34577899999999887779999999999999999999999999999999999876555689999999999999999999


Q ss_pred             CCCCCCCEEEeeCCC-CCCCCccccCCCCCCCCCCCCCC--C---CCCCCCCCccccccCCceecccccccceeeeEEee
Q 018022           90 DGVVEGDVVIPHFLA-DCTECVGCRSKKGNLCSAFPFKI--S---PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLD  163 (362)
Q Consensus        90 ~~~~~Gd~V~~~~~~-~~~~c~~c~~~~~~~c~~~~~~~--~---~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~  163 (362)
                      ++|++||||++.+.. .|+.|.+|+.+++++|++.....  .   .|...+                   |+|+||+++|
T Consensus        96 ~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~-------------------G~~aeyv~v~  156 (369)
T 1uuf_A           96 EKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTL-------------------GGYSQQIVVH  156 (369)
T ss_dssp             CSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCC-------------------CSSBSEEEEE
T ss_pred             CCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCC-------------------CcccceEEEc
Confidence            999999999988764 69999999999999998763110  0   022223                   4999999999


Q ss_pred             cCceEEcCCC-CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH
Q 018022          164 IAHVVKVDPT-VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG  242 (362)
Q Consensus       164 ~~~~~~~P~~-l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~  242 (362)
                      ++.++++|++ +++++||.+++++.|||+++.+ .++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++++
T Consensus       157 ~~~~~~~P~~~ls~~~aa~l~~~~~tA~~al~~-~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a  234 (369)
T 1uuf_A          157 ERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAA  234 (369)
T ss_dssp             GGGCEECCSCGGGHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHH
T ss_pred             chhEEECCCCCCCHHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence            9999999999 9999999999999999998754 699999999999999999999999999999 799999999999999


Q ss_pred             HhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhc
Q 018022          243 KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHS  322 (362)
Q Consensus       243 ~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~  322 (362)
                      +++|+++++++.+   .++.+   ++. +++|++||++|.+..++.+++.++++ |+++.+|..... ..++++..++.|
T Consensus       235 ~~lGa~~vi~~~~---~~~~~---~~~-~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~  305 (369)
T 1uuf_A          235 KALGADEVVNSRN---ADEMA---AHL-KSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPATP-HKSPEVFNLIMK  305 (369)
T ss_dssp             HHHTCSEEEETTC---HHHHH---TTT-TCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC--------CHHHHHTT
T ss_pred             HHcCCcEEecccc---HHHHH---Hhh-cCCCEEEECCCCHHHHHHHHHHhccC-CEEEEeccCCCC-ccccCHHHHHhC
Confidence            9999999999876   44433   333 47999999999876689999999997 999999975322 125777788899


Q ss_pred             CcEEEEeeccCCCccccHHHHHHHHHcCCccccee
Q 018022          323 GKILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFS  357 (362)
Q Consensus       323 ~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~  357 (362)
                      ++++.|++.+.   .++++++++++++|+|++.++
T Consensus       306 ~~~i~g~~~~~---~~~~~~~~~l~~~g~i~~~i~  337 (369)
T 1uuf_A          306 RRAIAGSMIGG---IPETQEMLDFCAEHGIVADIE  337 (369)
T ss_dssp             TCEEEECCSCC---HHHHHHHHHHHHHHTCCCCEE
T ss_pred             CcEEEEeecCC---HHHHHHHHHHHHhCCCCcceE
Confidence            99999987543   478999999999999998765

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=1.2e-52  Score=401.82  Aligned_cols=308  Identities=18%  Similarity=0.186  Sum_probs=270.4

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCC---CccccccceEEEEEeCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF---PRILGHEAIGVVESVGENVDGVV   93 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~---p~~~G~e~~G~Vv~vG~~v~~~~   93 (362)
                      |||+++.+++++++++++|.|+|+++||||||.++|||++|++++.|.++...+   |.++|||++| |+++|++ ++|+
T Consensus         1 MkA~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G-V~~vG~~-~~~~   78 (357)
T 2b5w_A            1 MKAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVG-VVVDPND-TELE   78 (357)
T ss_dssp             CEEEEEETTCSSCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTTSCTTCSEEECCSEEEE-EEEECTT-SSCC
T ss_pred             CeEEEEeCCCCceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCCCCCCCCCcccCceeEE-EEEECCC-CCCC
Confidence            799999999877999999999999999999999999999999999987654566   9999999999 9999999 9999


Q ss_pred             CCCEEEeeCCCC--CCCCccccCCCCCCCCCCCCCCCCCC-CCCCCccccccCCceecccccccceeeeEEeecCceEEc
Q 018022           94 EGDVVIPHFLAD--CTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV  170 (362)
Q Consensus        94 ~Gd~V~~~~~~~--~~~c~~c~~~~~~~c~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~  170 (362)
                      +||||++.+...  |++|.+|+.+++++|++..+.. .|. ..+|                   +|+||+++|++.++++
T Consensus        79 vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~-~g~~~~~G-------------------~~aey~~v~~~~~~~i  138 (357)
T 2b5w_A           79 EGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFE-RGIVGAHG-------------------YMSEFFTSPEKYLVRI  138 (357)
T ss_dssp             TTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEE-ETTBEECC-------------------SCBSEEEEEGGGEEEC
T ss_pred             CCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccc-cCccCCCc-------------------ceeeEEEEchHHeEEC
Confidence            999999999888  9999999999999999866410 032 2234                   9999999999999999


Q ss_pred             CCCCCccchhccccchhhhHHHHHHhcCCCCC------CEEEEECCChHHHHH-HHHH-HHcCCCEEEEEcCCch---HH
Q 018022          171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVG------STVVIFGLGSIGLAV-AEGA-RLCGATRIIGVDVISE---KF  239 (362)
Q Consensus       171 P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g------~~vlI~Gag~~G~~a-~~la-~~~g~~~vi~~~~~~~---~~  239 (362)
                      |++++ ++|+ ++.+++|||+++ +.+++++|      ++|||+|+|++|+++ +|+| +++|+++|++++++++   |+
T Consensus       139 P~~~~-~~aa-l~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~  215 (357)
T 2b5w_A          139 PRSQA-ELGF-LIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTI  215 (357)
T ss_dssp             CGGGS-TTGG-GHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHH
T ss_pred             CCCcc-hhhh-hhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHH
Confidence            99999 6555 566999999987 77889999      999999999999999 9999 9999955999999999   99


Q ss_pred             HHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHH
Q 018022          240 EIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEV  319 (362)
Q Consensus       240 ~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~  319 (362)
                      ++++++|++++ ++++   +++.+ ++++ ++++|+|||++|++..++.++++++++ |+++.+|.... ...++++..+
T Consensus       216 ~~~~~lGa~~v-~~~~---~~~~~-i~~~-~gg~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~  287 (357)
T 2b5w_A          216 DIIEELDATYV-DSRQ---TPVED-VPDV-YEQMDFIYEATGFPKHAIQSVQALAPN-GVGALLGVPSD-WAFEVDAGAF  287 (357)
T ss_dssp             HHHHHTTCEEE-ETTT---SCGGG-HHHH-SCCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCCC-CCCCCCHHHH
T ss_pred             HHHHHcCCccc-CCCc---cCHHH-HHHh-CCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEeCCCC-CCceecHHHH
Confidence            99999999999 8876   67777 7777 558999999999987799999999998 99999998542 3457787777


Q ss_pred             ----HhcCcEEEEeeccCCCccccHHHHHHHHHcC--C-cccceeccc
Q 018022          320 ----LHSGKILMGSLFGGLKAKSDIPILLKRYMDK--W-SYVPFSGTR  360 (362)
Q Consensus       320 ----~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g--~-l~~~~~~~~  360 (362)
                          +.|++++.|++.+.   +++++++++++++|  + +++.++.+|
T Consensus       288 ~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~~~~~~~~i~~~~  332 (357)
T 2b5w_A          288 HREMVLHNKALVGSVNSH---VEHFEAATVTFTKLPKWFLEDLVTGVH  332 (357)
T ss_dssp             HHHHHHTTCEEEECCCCC---HHHHHHHHHHHHHSCHHHHHHHEEEEE
T ss_pred             hHHHHhCCeEEEEeccCC---HHHHHHHHHHHHhCchhhhhhhcceee
Confidence                88999999986543   58899999999999  8 688777665

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=4.6e-52  Score=404.14  Aligned_cols=317  Identities=20%  Similarity=0.254  Sum_probs=276.6

Q ss_pred             CCcceeeEEEeccCCCceEEEEeecCC-CCCCeEEEEEeeeecchhhhhhhhcCCC-------CCCCCccccccceEEEE
Q 018022           12 GKPIQCRAAIATAPGEPLVIDEVIVDP-PNSHEVRVRIICTSLCHSDVTFWKMKDF-------PAVFPRILGHEAIGVVE   83 (362)
Q Consensus        12 ~~~~~~ka~~~~~~~~~l~l~~~~~p~-~~~~eVlVkv~~~~i~~~d~~~~~g~~~-------~~~~p~~~G~e~~G~Vv   83 (362)
                      ..+.+|+++++..++. |+++++|.|+ |+++||||||.+++||++|++++.|...       ..++|.++|||++|+|+
T Consensus        26 ~~~~~m~a~~~~~~~~-l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~  104 (404)
T 3ip1_A           26 EGKLTWLGSKVWRYPE-VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVV  104 (404)
T ss_dssp             TTTBBSCGGGTEEEEE-EEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEE
T ss_pred             hhhhhcceEEEEeCCc-eEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEE
Confidence            4555677777776665 9999999999 9999999999999999999999876421       14689999999999999


Q ss_pred             EeCCCC------CCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeccccccccee
Q 018022           84 SVGENV------DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFS  157 (362)
Q Consensus        84 ~vG~~v------~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a  157 (362)
                      ++|++|      ++|++||||++.+..+|+.|.+|+.+++++|++...   .|...+|                   +|+
T Consensus       105 ~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~g~~~~G-------------------~~a  162 (404)
T 3ip1_A          105 EAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNE---LGFNVDG-------------------AFA  162 (404)
T ss_dssp             EECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSB
T ss_pred             EECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccc---cCCCCCC-------------------CCc
Confidence            999999      889999999999999999999999999999998775   5666666                   999


Q ss_pred             eeEEeecCceEEcCCCCCc------cchhccccchhhhHHHHHHh-cCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEE
Q 018022          158 EYTVLDIAHVVKVDPTVPP------NRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRII  230 (362)
Q Consensus       158 ~y~~v~~~~~~~~P~~l~~------~~aa~~~~~~~ta~~~l~~~-~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi  230 (362)
                      ||+++|++.++++|++++.      .++|+++.+++|||+++... +++++|++|||+|+|++|++++|+|+++|+.+|+
T Consensus       163 ey~~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi  242 (404)
T 3ip1_A          163 EYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVI  242 (404)
T ss_dssp             SEEEEEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEE
T ss_pred             ceEEechHHeEeccccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEE
Confidence            9999999999999998863      45777888999999987655 4899999999999999999999999999998999


Q ss_pred             EEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCH-HHHHHHHHHh----ccCCceEEEEc
Q 018022          231 GVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLA-SLVQEAYACC----RKGWGKTIVLG  304 (362)
Q Consensus       231 ~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~-~~~~~~~~~l----~~~~G~iv~~G  304 (362)
                      +++++++|+++++++|+++++++++   .++.+.+++++++ ++|+||||+|++ ..+..+++.+    +++ |+++.+|
T Consensus       243 ~~~~~~~~~~~~~~lGa~~vi~~~~---~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~-G~iv~~G  318 (404)
T 3ip1_A          243 LSEPSEVRRNLAKELGADHVIDPTK---ENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGIN-ATVAIVA  318 (404)
T ss_dssp             EECSCHHHHHHHHHHTCSEEECTTT---SCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCC-CEEEECS
T ss_pred             EECCCHHHHHHHHHcCCCEEEcCCC---CCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCC-cEEEEeC
Confidence            9999999999999999999999987   7899999999988 999999999998 3467777777    997 9999999


Q ss_pred             cCCCCCccccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHHHcCCccc--ceeccc
Q 018022          305 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYV--PFSGTR  360 (362)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~--~~~~~~  360 (362)
                      ....  ..++++..++.+++++.|++.+.  ..++++++++++++| +++  .++.+|
T Consensus       319 ~~~~--~~~~~~~~~~~~~~~i~g~~~~~--~~~~~~~~~~ll~~g-l~~~~~i~~~~  371 (404)
T 3ip1_A          319 RADA--KIPLTGEVFQVRRAQIVGSQGHS--GHGTFPRVISLMASG-MDMTKIISKTV  371 (404)
T ss_dssp             CCCS--CEEECHHHHHHTTCEEEECCCCC--STTHHHHHHHHHHTT-CCGGGGCCEEE
T ss_pred             CCCC--CCcccHHHHhccceEEEEecCCC--chHHHHHHHHHHHcC-CChhheEEEEe
Confidence            8543  45888999999999999987533  258899999999999 754  455544

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=1.1e-51  Score=400.89  Aligned_cols=318  Identities=20%  Similarity=0.266  Sum_probs=272.9

Q ss_pred             eeeEEEeccCCCceEEEEeecCCC-CC-----CeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCC
Q 018022           16 QCRAAIATAPGEPLVIDEVIVDPP-NS-----HEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV   89 (362)
Q Consensus        16 ~~ka~~~~~~~~~l~l~~~~~p~~-~~-----~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v   89 (362)
                      +|||+++.+++. ++++++|.|+| ++     +||||||.+++||++|++++.|..+ .++|.++|||++|+|+++|++|
T Consensus         2 ~MkA~~~~~~~~-l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~-~~~p~v~GhE~~G~V~~vG~~v   79 (398)
T 2dph_A            2 GNKSVVYHGTRD-LRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI-VPKGHVLGHEITGEVVEKGSDV   79 (398)
T ss_dssp             CEEEEEEEETTE-EEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSC-CCTTCBCCCCEEEEEEEECTTC
T ss_pred             ccEEEEEEcCCC-EEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCC-CCCCcccCCceEEEEEEECCCC
Confidence            599999999876 99999999998 68     9999999999999999999988643 4679999999999999999999


Q ss_pred             CCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCC-----CCCCCCCCCCccccccCCceecccccccceeeeEEeec
Q 018022           90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK-----ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI  164 (362)
Q Consensus        90 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~-----~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~  164 (362)
                      ++|++||||++.+..+|+.|.+|+++++++|++....     ..+|...                ....|+|+||+++|+
T Consensus        80 ~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~----------------~~~~G~~aey~~v~~  143 (398)
T 2dph_A           80 ELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDL----------------KGWSGGQAEYVLVPY  143 (398)
T ss_dssp             CSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTB----------------SSCCCSSBSEEEESS
T ss_pred             CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCcccccccccccccccc----------------CCCCceeeeeEEecc
Confidence            9999999999999999999999999999999872111     0122100                001249999999998


Q ss_pred             C--ceEEcCCCCCccc----hhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchH
Q 018022          165 A--HVVKVDPTVPPNR----ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK  238 (362)
Q Consensus       165 ~--~~~~~P~~l~~~~----aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~  238 (362)
                      +  +++++|+++++++    ++++++++.|||+++ +.+++++|++|||+|+|++|++++|+|+++|+.+|++++++++|
T Consensus       144 ~~~~~~~iP~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~  222 (398)
T 2dph_A          144 ADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPER  222 (398)
T ss_dssp             HHHHCEECSSHHHHHHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHH
T ss_pred             ccCeEEECCCCCChhhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHH
Confidence            7  8999999999988    888888999999987 78899999999999999999999999999998899999999999


Q ss_pred             HHHHHhcCCcEEEcCCCCCCccH-HHHHHhhcCC-CccEEEEcCCCHH--------------HHHHHHHHhccCCceEEE
Q 018022          239 FEIGKRFGVTEFVNSKNCGDKSV-SQIIIDMTDG-GADYCFECVGLAS--------------LVQEAYACCRKGWGKTIV  302 (362)
Q Consensus       239 ~~~~~~~g~~~vv~~~~~~~~~~-~~~i~~~~~~-g~d~vid~~g~~~--------------~~~~~~~~l~~~~G~iv~  302 (362)
                      +++++++|++ ++++++   .++ .+.+++++++ ++|+|||++|+..              .++.+++.++++ |+++.
T Consensus       223 ~~~a~~lGa~-~i~~~~---~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g-G~iv~  297 (398)
T 2dph_A          223 LKLLSDAGFE-TIDLRN---SAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAG-GAIGI  297 (398)
T ss_dssp             HHHHHTTTCE-EEETTS---SSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEE-EEEEC
T ss_pred             HHHHHHcCCc-EEcCCC---cchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcC-CEEEE
Confidence            9999999996 888876   565 8889998888 8999999999752              689999999998 99999


Q ss_pred             EccCCC-----------CCccccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHHHcCCcc--c--ceeccc
Q 018022          303 LGVDQP-----------GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSY--V--PFSGTR  360 (362)
Q Consensus       303 ~G~~~~-----------~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~--~--~~~~~~  360 (362)
                      +|...+           ....++++..++.|++++.|++..   ..++++++++++++|+|+  +  .++.+|
T Consensus       298 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~---~~~~~~~~~~l~~~g~l~~~~~~~i~~~~  367 (398)
T 2dph_A          298 PGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAP---VTNYNRHLTEAILWDQMPYLSKVMNIEVI  367 (398)
T ss_dssp             CSCCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCC---GGGTHHHHHHHHHTTCCHHHHHHHCEEEE
T ss_pred             eccccccccccccccccCCcccccHHHHhhcCCEEEEeccC---cHHHHHHHHHHHHcCCCCccchhhEEEEE
Confidence            997521           234567777888999999987543   357899999999999999  6  455554

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=2.9e-51  Score=392.30  Aligned_cols=314  Identities=22%  Similarity=0.319  Sum_probs=267.2

Q ss_pred             CcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCC
Q 018022           13 KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGV   92 (362)
Q Consensus        13 ~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~   92 (362)
                      .+|+|+++++.++.+.++++++|.|+|+++||+|||.++|||++|++.+.|..+...+|.++|||++|+|+++|++|++|
T Consensus         6 ~~m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~~~   85 (357)
T 2cf5_A            6 AERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKF   85 (357)
T ss_dssp             CCCEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTCCCSSBCCCCEEEEEEEEECSSCCSC
T ss_pred             CcceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCC
Confidence            46789999999886669999999999999999999999999999999998876555789999999999999999999999


Q ss_pred             CCCCEEEeeCC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 018022           93 VEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (362)
Q Consensus        93 ~~Gd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P  171 (362)
                      ++||||++.+. .+|++|.+|+.+++++|++..+. ..+....|              ....|+|+||+++|+++++++|
T Consensus        86 ~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~-~~~~~~~g--------------~~~~G~~aey~~v~~~~~~~~P  150 (357)
T 2cf5_A           86 TVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWS-YNDVYING--------------QPTQGGFAKATVVHQKFVVKIP  150 (357)
T ss_dssp             CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEET-TTSBCTTS--------------CBCCCSSBSCEEEEGGGEEECC
T ss_pred             CCCCEEEEcCCCCCCCCChHHhCcCcccCCCcccc-ccccccCC--------------CCCCCccccEEEechhhEEECc
Confidence            99999987664 57999999999999999755431 01111111              1123599999999999999999


Q ss_pred             CCCCccchhccccchhhhHHHHHHhcCCC-CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCcE
Q 018022          172 PTVPPNRACLLSCGVSTGVGAAWRTANVE-VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTE  249 (362)
Q Consensus       172 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~-~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~~  249 (362)
                      +++++++||.+++++.|||+++ ...+++ +|++|||+|+|++|++++|+|+++|+ +|++++++++|++.++ ++|+++
T Consensus       151 ~~ls~~~aa~l~~~~~ta~~~l-~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~  228 (357)
T 2cf5_A          151 EGMAVEQAAPLLCAGVTVYSPL-SHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGADD  228 (357)
T ss_dssp             SSCCHHHHTGGGTHHHHHHHHH-HHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCCSC
T ss_pred             CCCCHHHhhhhhhhHHHHHHHH-HhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCCce
Confidence            9999999999999999999986 457888 99999999999999999999999999 9999999999999988 899999


Q ss_pred             EEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccc-cCHHHHHhcCcEEEE
Q 018022          250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLS-LSSFEVLHSGKILMG  328 (362)
Q Consensus       250 vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~-~~~~~~~~~~~~i~g  328 (362)
                      ++++++   .   +.++++++ ++|++||++|.+..++.++++++++ |+++.+|....  ... +++. ++.|++++.|
T Consensus       229 vi~~~~---~---~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~-~~~~~~~i~g  297 (357)
T 2cf5_A          229 YVIGSD---Q---AKMSELAD-SLDYVIDTVPVHHALEPYLSLLKLD-GKLILMGVINN--PLQFLTPL-LMLGRKVITG  297 (357)
T ss_dssp             EEETTC---H---HHHHHSTT-TEEEEEECCCSCCCSHHHHTTEEEE-EEEEECSCCSS--CCCCCHHH-HHHHTCEEEE
T ss_pred             eecccc---H---HHHHHhcC-CCCEEEECCCChHHHHHHHHHhccC-CEEEEeCCCCC--CccccCHH-HHhCccEEEE
Confidence            999875   3   34555554 7999999999876688999999998 99999997532  223 5556 8889999999


Q ss_pred             eeccCCCccccHHHHHHHHHcCCccccee
Q 018022          329 SLFGGLKAKSDIPILLKRYMDKWSYVPFS  357 (362)
Q Consensus       329 ~~~~~~~~~~~l~~~l~~~~~g~l~~~~~  357 (362)
                      ++.+.   .++++++++++++|+|++.++
T Consensus       298 ~~~~~---~~~~~~~~~l~~~g~l~~~~~  323 (357)
T 2cf5_A          298 SFIGS---MKETEEMLEFCKEKGLSSIIE  323 (357)
T ss_dssp             CCSCC---HHHHHHHHHHHHHTTCCCCEE
T ss_pred             EccCC---HHHHHHHHHHHHcCCCCCceE
Confidence            87543   578999999999999998763

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7.5e-51  Score=394.89  Aligned_cols=320  Identities=22%  Similarity=0.252  Sum_probs=270.3

Q ss_pred             eeeEEEeccCCCceEEEEeecCCCC-CCe------EEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCC
Q 018022           16 QCRAAIATAPGEPLVIDEVIVDPPN-SHE------VRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGEN   88 (362)
Q Consensus        16 ~~ka~~~~~~~~~l~l~~~~~p~~~-~~e------VlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~   88 (362)
                      +|||+++.+++. ++++++|.|+|. ++|      |||||.+++||++|++++.|..+ .++|.++|||++|+|+++|++
T Consensus         2 ~Mka~~~~~~~~-l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~p~v~GhE~~G~V~~vG~~   79 (398)
T 1kol_A            2 GNRGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKGRD   79 (398)
T ss_dssp             CEEEEEEEETTE-EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEECTT
T ss_pred             ccEEEEEecCCc-eEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC-CCCCcccCcccEEEEEEECCC
Confidence            599999999876 999999999997 898      99999999999999999988643 457899999999999999999


Q ss_pred             CCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCC---CCCCCCCCCccccccCCceecccccccceeeeEEeecC
Q 018022           89 VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI---SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA  165 (362)
Q Consensus        89 v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~---~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~  165 (362)
                      |++|++||||++.+..+|+.|.+|+.+++++|++.....   ..|....+               ...|+|+||+++|++
T Consensus        80 v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~---------------~~~G~~aey~~v~~~  144 (398)
T 1kol_A           80 VENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMG---------------DWTGGQAEYVLVPYA  144 (398)
T ss_dssp             CCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSC---------------CBCCCSBSEEEESSH
T ss_pred             CCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCC---------------CCCceeeeEEEecch
Confidence            999999999999999999999999999999998764210   01211000               012499999999986


Q ss_pred             --ceEEcCCCCCccc----hhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHH
Q 018022          166 --HVVKVDPTVPPNR----ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKF  239 (362)
Q Consensus       166 --~~~~~P~~l~~~~----aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~  239 (362)
                        +++++|+++++++    ++.+++++.|||+++ ..+++++|++|||+|+|++|++++|+|+++|+++|++++++++|+
T Consensus       145 ~~~~~~~P~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~  223 (398)
T 1kol_A          145 DFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARL  223 (398)
T ss_dssp             HHHCEECSCHHHHHHTHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHH
T ss_pred             hCeEEECCCCcchhhhcccccccccHHHHHHHHH-HHcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHH
Confidence              8999999999887    678888999999987 478999999999999999999999999999998899999999999


Q ss_pred             HHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCH---------------HHHHHHHHHhccCCceEEEE
Q 018022          240 EIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLA---------------SLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       240 ~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~---------------~~~~~~~~~l~~~~G~iv~~  303 (362)
                      ++++++|++ ++++.+  +.++.+.+++++++ ++|+|||++|..               ..++.++++++++ |+++.+
T Consensus       224 ~~a~~lGa~-~i~~~~--~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~  299 (398)
T 1kol_A          224 AHAKAQGFE-IADLSL--DTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIP  299 (398)
T ss_dssp             HHHHHTTCE-EEETTS--SSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEEC
T ss_pred             HHHHHcCCc-EEccCC--cchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcC-CEEEEe
Confidence            999999997 788765  23488899999887 999999999986               2689999999998 999999


Q ss_pred             ccCCC-C----------CccccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHHHcCCcc---cceeccc
Q 018022          304 GVDQP-G----------SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSY---VPFSGTR  360 (362)
Q Consensus       304 G~~~~-~----------~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~---~~~~~~~  360 (362)
                      |.... .          ..+.+++..++.|++++.|+..   ...++++++++++++|+|+   +.++.+|
T Consensus       300 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~l~~~g~l~~~~~~i~~~~  367 (398)
T 1kol_A          300 GLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQT---PVMKYNRALMQAIMWDRINIAEVVGVQVI  367 (398)
T ss_dssp             SCCCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSC---CHHHHHHHHHHHHHTTSCCHHHHHTEEEE
T ss_pred             ccccCCcccccccccccccccccHHHHhhcccEEEeccc---ChHHHHHHHHHHHHcCCCCCccceeEEEE
Confidence            97511 1          1346777778889999998642   2246789999999999998   3455554

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=4.3e-50  Score=385.40  Aligned_cols=315  Identities=21%  Similarity=0.329  Sum_probs=267.2

Q ss_pred             CcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCC
Q 018022           13 KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGV   92 (362)
Q Consensus        13 ~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~   92 (362)
                      .+|+|+++...+..+.++++++|.|+|+++||+|||.++|||++|++.+.|..+...+|.++|||++|+|+++|++|++|
T Consensus        13 ~~mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~   92 (366)
T 1yqd_A           13 HPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGEVTEVGSKVKKV   92 (366)
T ss_dssp             SSEEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSCCCSSBCCCCCEEEEEEEECTTCCSC
T ss_pred             CCeeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCCCCCCEecccceEEEEEEECCCCCcC
Confidence            35667777777666669999999999999999999999999999999998876556789999999999999999999999


Q ss_pred             CCCCEEEeeCC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 018022           93 VEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (362)
Q Consensus        93 ~~Gd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P  171 (362)
                      ++||||++.+. .+|+.|.+|+.+++++|++..+.. .+....|              ....|+|+||+++|+++++++|
T Consensus        93 ~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~-~~~~~~g--------------~~~~G~~aey~~v~~~~~~~~P  157 (366)
T 1yqd_A           93 NVGDKVGVGCLVGACHSCESCANDLENYCPKMILTY-ASIYHDG--------------TITYGGYSNHMVANERYIIRFP  157 (366)
T ss_dssp             CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESS-SSBCTTS--------------CBCCCSSBSEEEEEGGGCEECC
T ss_pred             CCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccc-cccccCC--------------CcCCCccccEEEEchhhEEECC
Confidence            99999998664 589999999999999996654321 1111111              1123499999999999999999


Q ss_pred             CCCCccchhccccchhhhHHHHHHhcCCC-CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCcE
Q 018022          172 PTVPPNRACLLSCGVSTGVGAAWRTANVE-VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTE  249 (362)
Q Consensus       172 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~-~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~~  249 (362)
                      +++++++||.+++++.|||+++ ...+++ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.++ ++|+++
T Consensus       158 ~~ls~~~aa~l~~~~~ta~~al-~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~  235 (366)
T 1yqd_A          158 DNMPLDGGAPLLCAGITVYSPL-KYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKNFGADS  235 (366)
T ss_dssp             TTSCTTTTGGGGTHHHHHHHHH-HHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHTSCCSE
T ss_pred             CCCCHHHhhhhhhhHHHHHHHH-HhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCce
Confidence            9999999999999999999986 456788 99999999999999999999999999 9999999999999887 899999


Q ss_pred             EEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 018022          250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS  329 (362)
Q Consensus       250 vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  329 (362)
                      ++++.+   .   +.+.++++ ++|++||++|....++.+++.++++ |+++.+|....  ..+++...++.|++++.|+
T Consensus       236 v~~~~~---~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~--~~~~~~~~~~~~~~~i~g~  305 (366)
T 1yqd_A          236 FLVSRD---Q---EQMQAAAG-TLDGIIDTVSAVHPLLPLFGLLKSH-GKLILVGAPEK--PLELPAFSLIAGRKIVAGS  305 (366)
T ss_dssp             EEETTC---H---HHHHHTTT-CEEEEEECCSSCCCSHHHHHHEEEE-EEEEECCCCSS--CEEECHHHHHTTTCEEEEC
T ss_pred             EEeccC---H---HHHHHhhC-CCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEccCCC--CCCcCHHHHHhCCcEEEEe
Confidence            999875   3   34555554 7999999999875588999999998 99999997532  3568888889999999998


Q ss_pred             eccCCCccccHHHHHHHHHcCCccccee
Q 018022          330 LFGGLKAKSDIPILLKRYMDKWSYVPFS  357 (362)
Q Consensus       330 ~~~~~~~~~~l~~~l~~~~~g~l~~~~~  357 (362)
                      +.+.   .++++++++++++|+|++.++
T Consensus       306 ~~~~---~~~~~~~~~l~~~g~l~~~~~  330 (366)
T 1yqd_A          306 GIGG---MKETQEMIDFAAKHNITADIE  330 (366)
T ss_dssp             CSCC---HHHHHHHHHHHHHTTCCCCEE
T ss_pred             cCCC---HHHHHHHHHHHHcCCCCCceE
Confidence            6543   478999999999999998763

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=6.2e-50  Score=394.97  Aligned_cols=321  Identities=20%  Similarity=0.186  Sum_probs=275.2

Q ss_pred             CCCcceeeEEEeccC---------------CCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcC-----------
Q 018022           11 AGKPIQCRAAIATAP---------------GEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK-----------   64 (362)
Q Consensus        11 ~~~~~~~ka~~~~~~---------------~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~-----------   64 (362)
                      .+.|.+|||+++.++               ++.++++++|.|+|+++||||||.+++||++|++...+.           
T Consensus        25 ~~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~  104 (456)
T 3krt_A           25 LPLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERY  104 (456)
T ss_dssp             SCCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHH
T ss_pred             CCCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhc
Confidence            357889999999987               234999999999999999999999999999998764321           


Q ss_pred             --CC----CCCCC-ccccccceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCc
Q 018022           65 --DF----PAVFP-RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTS  137 (362)
Q Consensus        65 --~~----~~~~p-~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~  137 (362)
                        ..    ...+| .++|||++|+|+++|++|++|++||||++.+. .|..|..|..+..+.|++...   .|...+   
T Consensus       105 g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~-~c~~~~~~~~~~~~~c~~~~~---~G~~~~---  177 (456)
T 3krt_A          105 GRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL-SVELESSDGHNDTMLDPEQRI---WGFETN---  177 (456)
T ss_dssp             HTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCE-ECCCCSGGGTTSGGGCTTCEE---TTTTSS---
T ss_pred             cccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCC-cccccccccccccccCccccc---cccCCC---
Confidence              11    12467 69999999999999999999999999998654 588899999999999988776   454432   


Q ss_pred             cccccCCceecccccccceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHh--cCCCCCCEEEEECC-ChHH
Q 018022          138 RFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT--ANVEVGSTVVIFGL-GSIG  214 (362)
Q Consensus       138 ~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~~vlI~Ga-g~~G  214 (362)
                                     .|+|+||+++|.++++++|+++++++||++++++.|||+++...  +++++|++|||+|+ |++|
T Consensus       178 ---------------~G~~aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG  242 (456)
T 3krt_A          178 ---------------FGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLG  242 (456)
T ss_dssp             ---------------SCSSBSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHH
T ss_pred             ---------------CCcccceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHH
Confidence                           13999999999999999999999999999998999999987644  78999999999998 9999


Q ss_pred             HHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCC--------------ccHHHHHHhhcCC-CccEEEEc
Q 018022          215 LAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGD--------------KSVSQIIIDMTDG-GADYCFEC  279 (362)
Q Consensus       215 ~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~--------------~~~~~~i~~~~~~-g~d~vid~  279 (362)
                      ++++|+|+++|+ ++++++++++|+++++++|+++++++.+.+.              ..+.+.+++++++ ++|+|||+
T Consensus       243 ~~avqlak~~Ga-~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~  321 (456)
T 3krt_A          243 SYATQFALAGGA-NPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEH  321 (456)
T ss_dssp             HHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEEC
T ss_pred             HHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEc
Confidence            999999999999 8888889999999999999999999876111              1245888898887 99999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHHHcCCcccceecc
Q 018022          280 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGT  359 (362)
Q Consensus       280 ~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~  359 (362)
                      +|+ ..+..++++++++ |+++.+|... ....+++...++.+++++.|++.+.   .+++.++++++++|+|++.++.+
T Consensus       322 ~G~-~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~i~~~  395 (456)
T 3krt_A          322 PGR-ETFGASVFVTRKG-GTITTCASTS-GYMHEYDNRYLWMSLKRIIGSHFAN---YREAWEANRLIAKGRIHPTLSKV  395 (456)
T ss_dssp             SCH-HHHHHHHHHEEEE-EEEEESCCTT-CSEEEEEHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSSCCCEEEE
T ss_pred             CCc-hhHHHHHHHhhCC-cEEEEEecCC-CcccccCHHHHHhcCeEEEEeccCC---HHHHHHHHHHHHcCCcccceeEE
Confidence            998 5599999999998 9999999853 3456788888899999999997655   36788999999999999988776


Q ss_pred             c
Q 018022          360 R  360 (362)
Q Consensus       360 ~  360 (362)
                      |
T Consensus       396 ~  396 (456)
T 3krt_A          396 Y  396 (456)
T ss_dssp             E
T ss_pred             E
Confidence            5

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=1.2e-49  Score=392.02  Aligned_cols=322  Identities=18%  Similarity=0.172  Sum_probs=272.6

Q ss_pred             CCCCcceeeEEEeccCC-------------CceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhh-------------c
Q 018022           10 TAGKPIQCRAAIATAPG-------------EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-------------M   63 (362)
Q Consensus        10 ~~~~~~~~ka~~~~~~~-------------~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~-------------g   63 (362)
                      +.++|.+|||+++.+++             +.++++++|.|+|+++||+|||.++|||++|++...             +
T Consensus        18 ~~~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~   97 (447)
T 4a0s_A           18 AAPVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNA   97 (447)
T ss_dssp             HSCCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHH
T ss_pred             ccCCChhheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhc
Confidence            44688999999999998             239999999999999999999999999999975421             1


Q ss_pred             ---CCCC-CCCC-ccccccceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcc
Q 018022           64 ---KDFP-AVFP-RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSR  138 (362)
Q Consensus        64 ---~~~~-~~~p-~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~  138 (362)
                         .... ..+| .++|||++|+|+++|++|++|++||||++.+...|+.|.. ..+.+++|.+...   .|...+    
T Consensus        98 ~~g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~-~~~~~~~c~~~~~---~G~~~~----  169 (447)
T 4a0s_A           98 RQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPA-THGDGMLGTEQRA---WGFETN----  169 (447)
T ss_dssp             TTCGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGG-GGTCTTCSTTCEE---TTTTSS----
T ss_pred             ccCccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccc-ccccccccccccc---ccccCC----
Confidence               1111 2456 7999999999999999999999999999999988888874 4577999988775   455432    


Q ss_pred             ccccCCceecccccccceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHH--hcCCCCCCEEEEECC-ChHHH
Q 018022          139 FKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR--TANVEVGSTVVIFGL-GSIGL  215 (362)
Q Consensus       139 ~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~vlI~Ga-g~~G~  215 (362)
                                    .|+|+||+++|+++++++|+++++++||++++++.|||+++..  .+++++|++|||+|+ |++|+
T Consensus       170 --------------~G~~aey~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~  235 (447)
T 4a0s_A          170 --------------FGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGS  235 (447)
T ss_dssp             --------------SCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHH
T ss_pred             --------------CCceeeeeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHH
Confidence                          1399999999999999999999999999999899999998753  489999999999998 99999


Q ss_pred             HHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCC---------------ccHHHHHHhhcCCCccEEEEcC
Q 018022          216 AVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGD---------------KSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       216 ~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~---------------~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      +++|+|+++|+ ++++++++++|+++++++|+++++++.+...               ..+.+.+++.++.++|++||++
T Consensus       236 ~a~qla~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~  314 (447)
T 4a0s_A          236 YAIQFVKNGGG-IPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHT  314 (447)
T ss_dssp             HHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECS
T ss_pred             HHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECC
Confidence            99999999999 8889989999999999999999998654100               0136788888844999999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHHHcCCcccceeccc
Q 018022          281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       281 g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      |.. .++.++++++++ |+++.+|... .....++...++.+++++.|++.+.   .+++.++++++++|+|++.++.+|
T Consensus       315 G~~-~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~i~~~~  388 (447)
T 4a0s_A          315 GRV-TFGLSVIVARRG-GTVVTCGSSS-GYLHTFDNRYLWMKLKKIVGSHGAN---HEEQQATNRLFESGAVVPAMSAVY  388 (447)
T ss_dssp             CHH-HHHHHHHHSCTT-CEEEESCCTT-CSEEEEEHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSSCCCEEEEE
T ss_pred             Cch-HHHHHHHHHhcC-CEEEEEecCC-CcccccCHHHHHhCCCEEEecCCCC---HHHHHHHHHHHHcCCcccceeEEE
Confidence            986 489999999997 9999999753 3456778888899999999987654   478899999999999999887765

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=6.9e-49  Score=375.23  Aligned_cols=294  Identities=20%  Similarity=0.202  Sum_probs=261.3

Q ss_pred             CCCcceeeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCC
Q 018022           11 AGKPIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGE   87 (362)
Q Consensus        11 ~~~~~~~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~   87 (362)
                      ..+|.+|||+++.+++.+  ++++++|.|+|+++||+|||.+++||++|+..+.|.++. ..+|.++|||++|+|+++|+
T Consensus        23 ~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~  102 (353)
T 4dup_A           23 MSLPQEMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVGP  102 (353)
T ss_dssp             CCCCSSEEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEEEECT
T ss_pred             CCCChheeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEEEECC
Confidence            357788999999998755  999999999999999999999999999999999988764 45799999999999999999


Q ss_pred             CCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCce
Q 018022           88 NVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV  167 (362)
Q Consensus        88 ~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~  167 (362)
                      ++++|++||||+...                              .+                   |+|+||+++|++++
T Consensus       103 ~v~~~~vGdrV~~~~------------------------------~~-------------------G~~aey~~v~~~~~  133 (353)
T 4dup_A          103 GVSGYAVGDKVCGLA------------------------------NG-------------------GAYAEYCLLPAGQI  133 (353)
T ss_dssp             TCCSCCTTCEEEEEC------------------------------SS-------------------CCSBSEEEEEGGGE
T ss_pred             CCCCCCCCCEEEEec------------------------------CC-------------------CceeeEEEEcHHHc
Confidence            999999999997432                              12                   49999999999999


Q ss_pred             EEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC
Q 018022          168 VKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG  246 (362)
Q Consensus       168 ~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g  246 (362)
                      +++|+++++++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|
T Consensus       134 ~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lG  212 (353)
T 4dup_A          134 LPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLG  212 (353)
T ss_dssp             EECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHT
T ss_pred             EeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcC
Confidence            9999999999999999999999999878899999999999965 9999999999999999 8999999999999999999


Q ss_pred             CcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccc-cCHHHHHhcCcE
Q 018022          247 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLS-LSSFEVLHSGKI  325 (362)
Q Consensus       247 ~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~-~~~~~~~~~~~~  325 (362)
                      +++++++.+   .++.+.+++.+++++|++|||+|++. ++.++++++++ |+++.+|..... ... +++..++.|+++
T Consensus       213 a~~~~~~~~---~~~~~~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~~-~~~~~~~~~~~~~~~~  286 (353)
T 4dup_A          213 AKRGINYRS---EDFAAVIKAETGQGVDIILDMIGAAY-FERNIASLAKD-GCLSIIAFLGGA-VAEKVNLSPIMVKRLT  286 (353)
T ss_dssp             CSEEEETTT---SCHHHHHHHHHSSCEEEEEESCCGGG-HHHHHHTEEEE-EEEEECCCTTCS-EEEEEECHHHHHTTCE
T ss_pred             CCEEEeCCc---hHHHHHHHHHhCCCceEEEECCCHHH-HHHHHHHhccC-CEEEEEEecCCC-cccCCCHHHHHhcCce
Confidence            999999987   78999999988449999999999875 89999999997 999999985433 333 778889999999


Q ss_pred             EEEeeccCCCcc-------ccHHHHHHHHHcCCcccceeccc
Q 018022          326 LMGSLFGGLKAK-------SDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       326 i~g~~~~~~~~~-------~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      +.|++++.+...       +.++++++++++|+|++.++.+|
T Consensus       287 i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~  328 (353)
T 4dup_A          287 VTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVF  328 (353)
T ss_dssp             EEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSCCCEEEEE
T ss_pred             EEEEeccccchhhhHHHHHHHHHHHHHHHHCCCccCCcceEE
Confidence            999987665321       11788999999999999988765

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=2.6e-48  Score=368.48  Aligned_cols=291  Identities=21%  Similarity=0.244  Sum_probs=258.5

Q ss_pred             CCcceeeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCC
Q 018022           12 GKPIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV   89 (362)
Q Consensus        12 ~~~~~~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v   89 (362)
                      ..|.+|||+++.+++++  ++++++|.|+|+++||||||.++|||++|++++.|.++ .++|.++|||++|+|+++|+++
T Consensus         4 ~~p~~mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~P~i~G~e~~G~V~~vG~~v   82 (334)
T 3qwb_A            4 TIPEQQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP-CEKPYVLGREASGTVVAKGKGV   82 (334)
T ss_dssp             -CCSEEEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSC-CCSSEECCSEEEEEEEEECTTC
T ss_pred             CCchheEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC-CCCCCccccceEEEEEEECCCC
Confidence            36788999999998875  99999999999999999999999999999999988765 4579999999999999999999


Q ss_pred             CCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEee-cCceE
Q 018022           90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLD-IAHVV  168 (362)
Q Consensus        90 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~-~~~~~  168 (362)
                      ++|++||||+...                                                  .|+|+||++++ .+.++
T Consensus        83 ~~~~~GdrV~~~~--------------------------------------------------~G~~aey~~v~~~~~~~  112 (334)
T 3qwb_A           83 TNFEVGDQVAYIS--------------------------------------------------NSTFAQYSKISSQGPVM  112 (334)
T ss_dssp             CSCCTTCEEEEEC--------------------------------------------------SSCSBSEEEEETTSSEE
T ss_pred             CCCCCCCEEEEee--------------------------------------------------CCcceEEEEecCcceEE
Confidence            9999999998531                                                  24999999999 99999


Q ss_pred             EcCCCCCccc---hhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh
Q 018022          169 KVDPTVPPNR---ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR  244 (362)
Q Consensus       169 ~~P~~l~~~~---aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~  244 (362)
                      ++|+++++++   ++.+++.+.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|++++++
T Consensus       113 ~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~  191 (334)
T 3qwb_A          113 KLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKE  191 (334)
T ss_dssp             ECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred             ECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence            9999999999   78888899999998877889999999999995 9999999999999999 99999999999999999


Q ss_pred             cCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcC
Q 018022          245 FGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSG  323 (362)
Q Consensus       245 ~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~  323 (362)
                      +|+++++++.+   .++.+.+++.+++ ++|++|||+|... ++.++++++++ |+++.+|.... ...+++...++.|+
T Consensus       192 ~ga~~~~~~~~---~~~~~~~~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~  265 (334)
T 3qwb_A          192 YGAEYLINASK---EDILRQVLKFTNGKGVDASFDSVGKDT-FEISLAALKRK-GVFVSFGNASG-LIPPFSITRLSPKN  265 (334)
T ss_dssp             TTCSEEEETTT---SCHHHHHHHHTTTSCEEEEEECCGGGG-HHHHHHHEEEE-EEEEECCCTTC-CCCCBCGGGGTTTT
T ss_pred             cCCcEEEeCCC---chHHHHHHHHhCCCCceEEEECCChHH-HHHHHHHhccC-CEEEEEcCCCC-CCCCcchhhhhhCc
Confidence            99999999987   8899999999987 9999999999854 89999999998 99999998543 33467777888899


Q ss_pred             cEEEEeeccCCCc-c----ccHHHHHHHHHcCCcccceeccc
Q 018022          324 KILMGSLFGGLKA-K----SDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       324 ~~i~g~~~~~~~~-~----~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      +++.++.++.+.. +    +.++++++++++|+|++.++.+|
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~  307 (334)
T 3qwb_A          266 ITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIKIYKTY  307 (334)
T ss_dssp             CEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSSCCCEEEEE
T ss_pred             eEEEEEEeccccCCHHHHHHHHHHHHHHHHCCCccCceeeEE
Confidence            9999877654322 2    33579999999999999987765

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=2.4e-49  Score=380.25  Aligned_cols=304  Identities=19%  Similarity=0.248  Sum_probs=258.9

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCC-CeEEEEEeeeecchhhhhhhhc--CCCCCCC---CccccccceEEEEEeCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNS-HEVRVRIICTSLCHSDVTFWKM--KDFPAVF---PRILGHEAIGVVESVGENVD   90 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~-~eVlVkv~~~~i~~~d~~~~~g--~~~~~~~---p~~~G~e~~G~Vv~vG~~v~   90 (362)
                      |||+++.+++++++++++|.|+|++ +||+|||.++|||++|++++.|  .++...+   |.++|||++|+|++  ++ +
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~--~~-~   77 (366)
T 2cdc_A            1 MKAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEE--SY-H   77 (366)
T ss_dssp             CEEEEECTTSCCCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC-------CCSCEECCSEEEEEECS--CC-S
T ss_pred             CeEEEEeCCCCceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCCCCcCCCCCcCCcceEEEEEe--CC-C
Confidence            7999999998669999999999999 9999999999999999999988  5443456   99999999999999  67 8


Q ss_pred             CCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCC--CCC-CCCCccccccCCceecccccccceeeeEEeecCce
Q 018022           91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP--WMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV  167 (362)
Q Consensus        91 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~--g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~  167 (362)
                      +|++||||++.+..+|++|.+|+.+++++|++...   .  |.. .+|                   +|+||+++|++.+
T Consensus        78 ~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~~~g~~~~~G-------------------~~aey~~v~~~~~  135 (366)
T 2cdc_A           78 GFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEF---GEAGIHKMDG-------------------FMREWWYDDPKYL  135 (366)
T ss_dssp             SCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCC---EEETTBEECC-------------------SCBSEEEECGGGE
T ss_pred             CCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCc---ccCCccCCCC-------------------ceeEEEEechHHe
Confidence            99999999999999999999999999999987654   2  322 334                   9999999999999


Q ss_pred             EEcCCCCCccchhccccchhhhHHHHH--H--hcCCC--C-------CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcC
Q 018022          168 VKVDPTVPPNRACLLSCGVSTGVGAAW--R--TANVE--V-------GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV  234 (362)
Q Consensus       168 ~~~P~~l~~~~aa~~~~~~~ta~~~l~--~--~~~~~--~-------g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~  234 (362)
                      +++|++++ ++|+ ++.++.|||+++.  +  ..+++  +       |++|||+|+|++|++++|+|+.+|+ +|+++++
T Consensus       136 ~~iP~~l~-~~Aa-l~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~  212 (366)
T 2cdc_A          136 VKIPKSIE-DIGI-LAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANR  212 (366)
T ss_dssp             EEECGGGT-TTGG-GHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTC-EEEEEES
T ss_pred             EECcCCcc-hhhh-hcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeC
Confidence            99999999 8876 5568999999876  4  78888  8       9999999999999999999999999 9999999


Q ss_pred             Cc---hHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHH-HHHHHHhccCCceEEEEccCCCCC
Q 018022          235 IS---EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLV-QEAYACCRKGWGKTIVLGVDQPGS  310 (362)
Q Consensus       235 ~~---~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~-~~~~~~l~~~~G~iv~~G~~~~~~  310 (362)
                      ++   +++++++++|++++ + .+    ++.+.+.+ +++++|++||++|.+..+ +.+++.++++ |+++.+|.... .
T Consensus       213 ~~~~~~~~~~~~~~ga~~v-~-~~----~~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g~~~~-~  283 (366)
T 2cdc_A          213 REPTEVEQTVIEETKTNYY-N-SS----NGYDKLKD-SVGKFDVIIDATGADVNILGNVIPLLGRN-GVLGLFGFSTS-G  283 (366)
T ss_dssp             SCCCHHHHHHHHHHTCEEE-E-CT----TCSHHHHH-HHCCEEEEEECCCCCTHHHHHHGGGEEEE-EEEEECSCCCS-C
T ss_pred             CccchHHHHHHHHhCCcee-c-hH----HHHHHHHH-hCCCCCEEEECCCChHHHHHHHHHHHhcC-CEEEEEecCCC-C
Confidence            98   99999999999988 6 32    45566666 435899999999998668 9999999997 99999998543 3


Q ss_pred             ccccCHHH---HHhcCcEEEEeeccCCCccccHHHHHHHHHcCC------cccceeccc
Q 018022          311 QLSLSSFE---VLHSGKILMGSLFGGLKAKSDIPILLKRYMDKW------SYVPFSGTR  360 (362)
Q Consensus       311 ~~~~~~~~---~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~------l~~~~~~~~  360 (362)
                      ..++++..   ++.|++++.|++.+.   .++++++++++++|+      +++.++.+|
T Consensus       284 ~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~  339 (366)
T 2cdc_A          284 SVPLDYKTLQEIVHTNKTIIGLVNGQ---KPHFQQAVVHLASWKTLYPKAAKMLITKTV  339 (366)
T ss_dssp             EEEEEHHHHHHHHHTTCEEEECCCCC---HHHHHHHHHHHHHHHHHSHHHHTTSEEEEE
T ss_pred             ccccChhhhHHHHhcCcEEEEecCCC---HHHHHHHHHHHHcCCCCcccchhhcEEEEE
Confidence            35677777   889999999986542   588999999999999      557676655

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=5.8e-48  Score=370.16  Aligned_cols=293  Identities=15%  Similarity=0.130  Sum_probs=252.9

Q ss_pred             CCCcceeeEEEeccC---CC--ceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEe
Q 018022           11 AGKPIQCRAAIATAP---GE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESV   85 (362)
Q Consensus        11 ~~~~~~~ka~~~~~~---~~--~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~v   85 (362)
                      ...|++|||+++.++   +.  .++++++|.|+|+++||+|||.+++||++|+.++.|..+...+|.++|||++|+|+++
T Consensus        17 ~~~m~~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~v   96 (363)
T 4dvj_A           17 NLYFQSMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVSAV   96 (363)
T ss_dssp             --CCCEEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC--CCSBCCCCCEEEEEEEE
T ss_pred             hhhhheeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCCCCCCCcccceeEEEEEEe
Confidence            357789999999876   22  2999999999999999999999999999999999998776788999999999999999


Q ss_pred             CCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC
Q 018022           86 GENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA  165 (362)
Q Consensus        86 G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~  165 (362)
                      |++|++|++||||+..+.                           ...+                   |+|+||+++|++
T Consensus        97 G~~v~~~~vGdrV~~~~~---------------------------~~~~-------------------G~~aey~~v~~~  130 (363)
T 4dvj_A           97 GPDVTLFRPGDEVFYAGS---------------------------IIRP-------------------GTNAEFHLVDER  130 (363)
T ss_dssp             CTTCCSCCTTCEEEECCC---------------------------TTSC-------------------CSCBSEEEEEGG
T ss_pred             CCCCCCCCCCCEEEEccC---------------------------CCCC-------------------ccceEEEEeCHH
Confidence            999999999999985321                           1123                   399999999999


Q ss_pred             ceEEcCCCCCccchhccccchhhhHHHHHHhcCCC-----CCCEEEEECC-ChHHHHHHHHHHHc-CCCEEEEEcCCchH
Q 018022          166 HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVE-----VGSTVVIFGL-GSIGLAVAEGARLC-GATRIIGVDVISEK  238 (362)
Q Consensus       166 ~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~-----~g~~vlI~Ga-g~~G~~a~~la~~~-g~~~vi~~~~~~~~  238 (362)
                      .++++|+++++++||++++++.|||+++.+..+++     +|++|||+|+ |++|++++|+|+++ |+ +|++++++++|
T Consensus       131 ~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~-~Vi~~~~~~~~  209 (363)
T 4dvj_A          131 IVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDL-TVIATASRPET  209 (363)
T ss_dssp             GCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCS-EEEEECSSHHH
T ss_pred             HeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCC-EEEEEeCCHHH
Confidence            99999999999999999999999999988888988     8999999995 99999999999984 77 99999999999


Q ss_pred             HHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHH
Q 018022          239 FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFE  318 (362)
Q Consensus       239 ~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~  318 (362)
                      +++++++|+++++++.+    ++.+.++++.++++|+||||+|++..++.++++++++ |+++.+|..     .++++..
T Consensus       210 ~~~~~~lGad~vi~~~~----~~~~~v~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~-----~~~~~~~  279 (363)
T 4dvj_A          210 QEWVKSLGAHHVIDHSK----PLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQ-GRFCLIDDP-----SAFDIML  279 (363)
T ss_dssp             HHHHHHTTCSEEECTTS----CHHHHHHTTCSCCEEEEEECSCHHHHHHHHHHHSCTT-CEEEECSCC-----SSCCGGG
T ss_pred             HHHHHHcCCCEEEeCCC----CHHHHHHHhcCCCceEEEECCCchhhHHHHHHHhcCC-CEEEEECCC-----CccchHH
Confidence            99999999999999864    5888888884449999999999987799999999997 999999642     2566677


Q ss_pred             HHhcCcEEEEeeccCC-----Cc----cccHHHHHHHHHcCCcccceeccc
Q 018022          319 VLHSGKILMGSLFGGL-----KA----KSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       319 ~~~~~~~i~g~~~~~~-----~~----~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      ++.|++++.+++++..     ..    .++++++++++++|+|++.++.+|
T Consensus       280 ~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~  330 (363)
T 4dvj_A          280 FKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRTTLTNRL  330 (363)
T ss_dssp             GTTTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSSCCCEEEEE
T ss_pred             HhhccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCeecccccee
Confidence            8889999999765431     01    356899999999999999988765

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=2.5e-48  Score=369.84  Aligned_cols=295  Identities=22%  Similarity=0.257  Sum_probs=250.8

Q ss_pred             CCCCCCCcceeeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEE
Q 018022            7 SNKTAGKPIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVE   83 (362)
Q Consensus         7 ~~~~~~~~~~~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv   83 (362)
                      +...+.+|.+|||+++.+++.+  ++++++|.|+|+++||+|||.+++||++|+.++.|.++. ..+|.++|||++|+|+
T Consensus        12 ~~~~~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~   91 (342)
T 4eye_A           12 LEAQTQGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVR   91 (342)
T ss_dssp             ------CCCEEEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEE
T ss_pred             CcccccCCcceEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEE
Confidence            3334568899999999997765  999999999999999999999999999999999987754 5789999999999999


Q ss_pred             EeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEee
Q 018022           84 SVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLD  163 (362)
Q Consensus        84 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~  163 (362)
                      ++|++++ |++||||+....                              +                   |+|+||++++
T Consensus        92 ~vG~~v~-~~vGDrV~~~~~------------------------------~-------------------G~~aey~~v~  121 (342)
T 4eye_A           92 SAPEGSG-IKPGDRVMAFNF------------------------------I-------------------GGYAERVAVA  121 (342)
T ss_dssp             ECCTTSS-CCTTCEEEEECS------------------------------S-------------------CCSBSEEEEC
T ss_pred             EECCCCC-CCCCCEEEEecC------------------------------C-------------------CcceEEEEEc
Confidence            9999999 999999985421                              2                   3999999999


Q ss_pred             cCceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH
Q 018022          164 IAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG  242 (362)
Q Consensus       164 ~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~  242 (362)
                      +++++++|+++++++||.++++++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++++
T Consensus       122 ~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~  200 (342)
T 4eye_A          122 PSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFV  200 (342)
T ss_dssp             GGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHH
T ss_pred             HHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence            99999999999999999999999999999888999999999999998 9999999999999999 999999999999999


Q ss_pred             HhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHh
Q 018022          243 KRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLH  321 (362)
Q Consensus       243 ~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~  321 (362)
                      +++|++++++++    .++.+.+++.+++ ++|++|||+|++. +..++++++++ |+++.+|...+. ...+++..++.
T Consensus       201 ~~~ga~~v~~~~----~~~~~~v~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~  273 (342)
T 4eye_A          201 KSVGADIVLPLE----EGWAKAVREATGGAGVDMVVDPIGGPA-FDDAVRTLASE-GRLLVVGFAAGG-IPTIKVNRLLL  273 (342)
T ss_dssp             HHHTCSEEEESS----TTHHHHHHHHTTTSCEEEEEESCC--C-HHHHHHTEEEE-EEEEEC-----------CCCCGGG
T ss_pred             HhcCCcEEecCc----hhHHHHHHHHhCCCCceEEEECCchhH-HHHHHHhhcCC-CEEEEEEccCCC-CCccCHHHHhh
Confidence            999999999876    3688899999988 9999999999875 89999999998 999999975432 33566666888


Q ss_pred             cCcEEEEeeccCCC------ccccHHHHHHHHHcCCcccceeccc
Q 018022          322 SGKILMGSLFGGLK------AKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       322 ~~~~i~g~~~~~~~------~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      |++++.|++++.+.      ..++++++++++++| +++.++.+|
T Consensus       274 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l~~~i~~~~  317 (342)
T 4eye_A          274 RNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-MRPPVSARI  317 (342)
T ss_dssp             TTCEEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT-CCCCEEEEE
T ss_pred             cCCEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC-CCCCcceEE
Confidence            99999999765431      125689999999999 999888765

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=1.6e-47  Score=364.42  Aligned_cols=289  Identities=17%  Similarity=0.175  Sum_probs=251.9

Q ss_pred             CcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC--CCCCccccccceEEEEEeCCCCC
Q 018022           13 KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP--AVFPRILGHEAIGVVESVGENVD   90 (362)
Q Consensus        13 ~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~--~~~p~~~G~e~~G~Vv~vG~~v~   90 (362)
                      .|++|||+++.+++++++++++|.|+|+++||||||.+++||++|+.++.|..+.  ..+|.++|||++|+|+++|++++
T Consensus         4 ~~~~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~~v~   83 (343)
T 3gaz_A            4 TTPTMIAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEVD   83 (343)
T ss_dssp             --CEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             CchhheEEEEecCCCceEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECCCCC
Confidence            3577999999999988999999999999999999999999999999999886532  57899999999999999999999


Q ss_pred             CCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCC-CCCCCccccccCCceecccccccceeeeEEeecCceEE
Q 018022           91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (362)
Q Consensus        91 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~  169 (362)
                      +|++||||+....                          |. ..+                   |+|+||+++|++.+++
T Consensus        84 ~~~vGdrV~~~~~--------------------------g~~~~~-------------------G~~aey~~v~~~~~~~  118 (343)
T 3gaz_A           84 SFRVGDAVFGLTG--------------------------GVGGLQ-------------------GTHAQFAAVDARLLAS  118 (343)
T ss_dssp             SCCTTCEEEEECC--------------------------SSTTCC-------------------CSSBSEEEEEGGGEEE
T ss_pred             CCCCCCEEEEEeC--------------------------CCCCCC-------------------cceeeEEEecHHHeee
Confidence            9999999985321                          10 012                   3999999999999999


Q ss_pred             cCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc
Q 018022          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT  248 (362)
Q Consensus       170 ~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~  248 (362)
                      +|+++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++ .+++++++++++|++
T Consensus       119 ~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lGa~  196 (343)
T 3gaz_A          119 KPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLGAT  196 (343)
T ss_dssp             CCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHTSE
T ss_pred             CCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCCC
Confidence            99999999999999999999998878899999999999995 9999999999999999 89999 889999999999999


Q ss_pred             EEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEE
Q 018022          249 EFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM  327 (362)
Q Consensus       249 ~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~  327 (362)
                      . ++ .+   .++.+.+++.+++ ++|++|||+|++. ++.++++++++ |+++.+|...     .++...++.|++++.
T Consensus       197 ~-i~-~~---~~~~~~~~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~-G~iv~~g~~~-----~~~~~~~~~~~~~~~  264 (343)
T 3gaz_A          197 P-ID-AS---REPEDYAAEHTAGQGFDLVYDTLGGPV-LDASFSAVKRF-GHVVSCLGWG-----THKLAPLSFKQATYS  264 (343)
T ss_dssp             E-EE-TT---SCHHHHHHHHHTTSCEEEEEESSCTHH-HHHHHHHEEEE-EEEEESCCCS-----CCCCHHHHHTTCEEE
T ss_pred             E-ec-cC---CCHHHHHHHHhcCCCceEEEECCCcHH-HHHHHHHHhcC-CeEEEEcccC-----ccccchhhhcCcEEE
Confidence            8 77 54   6788999999888 9999999999854 89999999997 9999998753     345667888999999


Q ss_pred             EeeccCC--------CccccHHHHHHHHHcCCccccee-ccc
Q 018022          328 GSLFGGL--------KAKSDIPILLKRYMDKWSYVPFS-GTR  360 (362)
Q Consensus       328 g~~~~~~--------~~~~~l~~~l~~~~~g~l~~~~~-~~~  360 (362)
                      |++....        ...++++++++++++|+|++.++ .+|
T Consensus       265 g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~  306 (343)
T 3gaz_A          265 GVFTLHTLLANEGLAHFGEMLREADALVQTGKLAPRLDPRTF  306 (343)
T ss_dssp             ECCTTHHHHHTCSHHHHHHHHHHHHHHHHTTCCCCCBCSCCE
T ss_pred             EEEeccchhcccchHHHHHHHHHHHHHHHCCCcccCccCcEe
Confidence            9864321        01367999999999999999888 565

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=2.2e-47  Score=363.91  Aligned_cols=288  Identities=19%  Similarity=0.193  Sum_probs=251.2

Q ss_pred             ceeeEEEeccCC-----CceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCC
Q 018022           15 IQCRAAIATAPG-----EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV   89 (362)
Q Consensus        15 ~~~ka~~~~~~~-----~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v   89 (362)
                      |+|||+++.++|     +.|+++++|.|+|+++||+|||.+++||++|++.+.|.  ...+|.++|||++|+|+++|+++
T Consensus         1 m~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~--~~~~p~i~G~e~~G~V~~vG~~v   78 (346)
T 3fbg_A            1 MSLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD--VSKAPRVLGFDAIGVVESVGNEV   78 (346)
T ss_dssp             -CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC--CSSSCBCCCCCEEEEEEEECTTC
T ss_pred             CCcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC--CCCCCcCcCCccEEEEEEeCCCC
Confidence            579999999876     33999999999999999999999999999999998886  34679999999999999999999


Q ss_pred             CCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEE
Q 018022           90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (362)
Q Consensus        90 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~  169 (362)
                      ++|++||||+..+.                           ...+                   |+|+||+++|++.+++
T Consensus        79 ~~~~~GdrV~~~~~---------------------------~~~~-------------------G~~aey~~v~~~~~~~  112 (346)
T 3fbg_A           79 TMFNQGDIVYYSGS---------------------------PDQN-------------------GSNAEYQLINERLVAK  112 (346)
T ss_dssp             CSCCTTCEEEECCC---------------------------TTSC-------------------CSSBSEEEEEGGGEEE
T ss_pred             CcCCCCCEEEEcCC---------------------------CCCC-------------------cceeEEEEEChHHeEE
Confidence            99999999985321                           1122                   4999999999999999


Q ss_pred             cCCCCCccchhccccchhhhHHHHHHhcCCC------CCCEEEEEC-CChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH
Q 018022          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVE------VGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVDVISEKFEIG  242 (362)
Q Consensus       170 ~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~------~g~~vlI~G-ag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~  242 (362)
                      +|+++++++||++++++.|||+++.+..+++      +|++|||+| +|++|++++|+|+++|+ +|++++++++|++++
T Consensus       113 iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~  191 (346)
T 3fbg_A          113 APKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWT  191 (346)
T ss_dssp             CCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHH
T ss_pred             CCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence            9999999999999999999999988889998      999999996 59999999999999999 999999999999999


Q ss_pred             HhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhc
Q 018022          243 KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHS  322 (362)
Q Consensus       243 ~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~  322 (362)
                      +++|+++++++++    ++.+.++++.++++|++|||+|++..++.++++++++ |+++.+|..    ..++++..++.|
T Consensus       192 ~~lGa~~vi~~~~----~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~-G~iv~~~~~----~~~~~~~~~~~~  262 (346)
T 3fbg_A          192 KKMGADIVLNHKE----SLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPR-GHIATIVAF----ENDQDLNALKPK  262 (346)
T ss_dssp             HHHTCSEEECTTS----CHHHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEE-EEEEESSCC----SSCBCGGGGTTT
T ss_pred             HhcCCcEEEECCc----cHHHHHHHhCCCCccEEEECCCchHHHHHHHHHhccC-CEEEEECCC----CCCCcccccccc
Confidence            9999999999864    5788888884339999999999988789999999998 999998753    234666677889


Q ss_pred             CcEEEEeeccCCC---------ccccHHHHHHHHHcCCcccceeccc
Q 018022          323 GKILMGSLFGGLK---------AKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       323 ~~~i~g~~~~~~~---------~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      ++++.++++....         ..+.++++++++++|+|++.++.+|
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~  309 (346)
T 3fbg_A          263 SLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQPTTTKVI  309 (346)
T ss_dssp             TCEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSSCCCEEEEE
T ss_pred             ceEEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCCEECCcccee
Confidence            9999997654311         1356899999999999999988776

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=1.6e-47  Score=361.82  Aligned_cols=289  Identities=21%  Similarity=0.213  Sum_probs=255.0

Q ss_pred             eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 018022           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE   94 (362)
Q Consensus        17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~   94 (362)
                      |||+++.+++++  |++++++.|+|+++||+|||.+++||++|++++.|.++..++|.++|||++|+|+++|+++++|++
T Consensus         2 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~   81 (325)
T 3jyn_A            2 AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFKV   81 (325)
T ss_dssp             EEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred             cEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCC
Confidence            999999998876  999999999999999999999999999999999998776678999999999999999999999999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022           95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (362)
Q Consensus        95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l  174 (362)
                      ||||+..+.                             .+                   |+|+||+++|+++++++|+++
T Consensus        82 GdrV~~~~~-----------------------------~~-------------------G~~aey~~v~~~~~~~~P~~~  113 (325)
T 3jyn_A           82 GDRVAYGTG-----------------------------PL-------------------GAYSEVHVLPEANLVKLADSV  113 (325)
T ss_dssp             TCEEEESSS-----------------------------SS-------------------CCSBSEEEEEGGGEEECCTTS
T ss_pred             CCEEEEecC-----------------------------CC-------------------ccccceEEecHHHeEECCCCC
Confidence            999975321                             12                   499999999999999999999


Q ss_pred             CccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  253 (362)
Q Consensus       175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~  253 (362)
                      ++++||++++...|+|+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|+++++++|+++++++
T Consensus       114 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~  192 (325)
T 3jyn_A          114 SFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETIDY  192 (325)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred             CHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEeC
Confidence            999999999899999999888899999999999995 9999999999999999 99999999999999999999999999


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhc-CcEEEEeec
Q 018022          254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHS-GKILMGSLF  331 (362)
Q Consensus       254 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~-~~~i~g~~~  331 (362)
                      .+   .++.+.+++.+++ ++|++||++|+.. +..++++++++ |+++.+|.... ....+++..++.+ .+.+.+..+
T Consensus       193 ~~---~~~~~~~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~  266 (325)
T 3jyn_A          193 SH---EDVAKRVLELTDGKKCPVVYDGVGQDT-WLTSLDSVAPR-GLVVSFGNASG-PVSGVNLGILAQKDSVYVTRPTL  266 (325)
T ss_dssp             TT---SCHHHHHHHHTTTCCEEEEEESSCGGG-HHHHHTTEEEE-EEEEECCCTTC-CCCSCCTHHHHHTTSCEEECCCH
T ss_pred             CC---ccHHHHHHHHhCCCCceEEEECCChHH-HHHHHHHhcCC-CEEEEEecCCC-CCCCCCHHHHhhcCcEEEEeeee
Confidence            87   8899999999988 9999999999854 89999999998 99999998543 2336777777777 677776543


Q ss_pred             cCCC-cccc----HHHHHHHHHcCCcccceeccc
Q 018022          332 GGLK-AKSD----IPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       332 ~~~~-~~~~----l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      +.+. .+++    ++++++++++|+|++.++.+|
T Consensus       267 ~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~  300 (325)
T 3jyn_A          267 GSYANNAQNLQTMADELFDMLASGKLKVDGIEQY  300 (325)
T ss_dssp             HHHSCSTTHHHHHHHHHHHHHHTTSSCCCCCEEE
T ss_pred             eeecCCHHHHHHHHHHHHHHHHCCCeeCccccEE
Confidence            3221 2334    458999999999999987765

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=1.2e-48  Score=372.89  Aligned_cols=294  Identities=17%  Similarity=0.173  Sum_probs=250.9

Q ss_pred             CCcceeeEEEec--cC---CCceEEEEe---------ecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccc
Q 018022           12 GKPIQCRAAIAT--AP---GEPLVIDEV---------IVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGH   76 (362)
Q Consensus        12 ~~~~~~ka~~~~--~~---~~~l~l~~~---------~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~   76 (362)
                      .+|.+|||+++.  ++   .+.++++++         |.|+|+++||+|||.+++||++|++.+.|.++. ..+|.++||
T Consensus         6 ~~p~~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~   85 (349)
T 3pi7_A            6 TIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAGF   85 (349)
T ss_dssp             CCCSEEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTTSBCCS
T ss_pred             CCchhheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCCCCccc
Confidence            467889999999  22   223888888         999999999999999999999999999987654 468999999


Q ss_pred             cceEEEEEeCCCC-CCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccc
Q 018022           77 EAIGVVESVGENV-DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSS  155 (362)
Q Consensus        77 e~~G~Vv~vG~~v-~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~  155 (362)
                      |++|+|+++|++| ++|++||||+...                           |...+|                   +
T Consensus        86 E~~G~V~~vG~~v~~~~~vGdrV~~~~---------------------------g~~~~G-------------------~  119 (349)
T 3pi7_A           86 EGVGTIVAGGDEPYAKSLVGKRVAFAT---------------------------GLSNWG-------------------S  119 (349)
T ss_dssp             EEEEEEEEECSSHHHHHHTTCEEEEEC---------------------------TTSSCC-------------------S
T ss_pred             eEEEEEEEECCCccCCCCCCCEEEEec---------------------------cCCCCc-------------------c
Confidence            9999999999999 9999999998652                           222334                   9


Q ss_pred             eeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCC-CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEc
Q 018022          156 FSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVG-STVVIFGL-GSIGLAVAEGARLCGATRIIGVD  233 (362)
Q Consensus       156 ~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g-~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~  233 (362)
                      |+||+++|+++++++|+++++++||++++...|||+ +.+.++ ++| ++|||+|+ |++|++++|+|+++|+ +|++++
T Consensus       120 ~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~-~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~  196 (349)
T 3pi7_A          120 WAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIA-MFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTV  196 (349)
T ss_dssp             SBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHH-HHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTC-EEEEEE
T ss_pred             ceeeEeechHHeEECCCCCCHHHHhhccccHHHHHH-HHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEe
Confidence            999999999999999999999999999999999996 456666 677 68888855 9999999999999999 999999


Q ss_pred             CCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCcc
Q 018022          234 VISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL  312 (362)
Q Consensus       234 ~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~  312 (362)
                      ++++|+++++++|+++++|+++   .++.+.+++++++ ++|++|||+|++. +..++++++++ |+++.+|.... ...
T Consensus       197 ~~~~~~~~~~~~Ga~~~~~~~~---~~~~~~v~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~-~~~  270 (349)
T 3pi7_A          197 RRDEQIALLKDIGAAHVLNEKA---PDFEATLREVMKAEQPRIFLDAVTGPL-ASAIFNAMPKR-ARWIIYGRLDP-DAT  270 (349)
T ss_dssp             SCGGGHHHHHHHTCSEEEETTS---TTHHHHHHHHHHHHCCCEEEESSCHHH-HHHHHHHSCTT-CEEEECCCSCC-SCC
T ss_pred             CCHHHHHHHHHcCCCEEEECCc---HHHHHHHHHHhcCCCCcEEEECCCChh-HHHHHhhhcCC-CEEEEEeccCC-CCC
Confidence            9999999999999999999987   7899999999887 9999999999887 68999999997 99999997433 345


Q ss_pred             ccCH-HHHHhcCcEEEEeeccCCC------ccccHHHHHHHHHcCCcccceeccc
Q 018022          313 SLSS-FEVLHSGKILMGSLFGGLK------AKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       313 ~~~~-~~~~~~~~~i~g~~~~~~~------~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      .++. ..++.|++++.|++.+.+.      ..++++++++++++|+|++.++.+|
T Consensus       271 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~  325 (349)
T 3pi7_A          271 VIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWSTDVTAVV  325 (349)
T ss_dssp             CCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSCCC-CCEEE
T ss_pred             CCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCcccccceEE
Confidence            6777 7889999999998765432      1367899999999999999887765

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=5e-47  Score=364.72  Aligned_cols=296  Identities=19%  Similarity=0.163  Sum_probs=247.4

Q ss_pred             CcceeeEEEeccCCCceEEE-EeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCC
Q 018022           13 KPIQCRAAIATAPGEPLVID-EVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG   91 (362)
Q Consensus        13 ~~~~~ka~~~~~~~~~l~l~-~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~   91 (362)
                      +|.+|||+++.++++ ++++ ++|.|+|+++||||||.+++||++|++++.+.   ..+|.++|||++|+|+++|++|++
T Consensus         8 ~p~~mkA~v~~~~~~-l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~---~~~p~v~G~e~~G~V~~vG~~v~~   83 (371)
T 3gqv_A            8 PPPQQTALTVNDHDE-VTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF---ATPWAFLGTDYAGTVVAVGSDVTH   83 (371)
T ss_dssp             CCSCEEEEEECTTSC-EEEEEEECCCCCCTTSEEEEEEEEECCGGGGC--------CCTTSCCCSEEEEEEEEECTTCCS
T ss_pred             CchhceeEEEcCCCc-eEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC---CCCCccCccccEEEEEEeCCCCCC
Confidence            677899999999987 9998 99999999999999999999999999988763   346999999999999999999999


Q ss_pred             CCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 018022           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (362)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P  171 (362)
                      |++||||+..       |..|..+               ...+                   |+|+||+++|.++++++|
T Consensus        84 ~~~GdrV~~~-------~~~~~~~---------------~~~~-------------------G~~aey~~v~~~~~~~~P  122 (371)
T 3gqv_A           84 IQVGDRVYGA-------QNEMCPR---------------TPDQ-------------------GAFSQYTVTRGRVWAKIP  122 (371)
T ss_dssp             CCTTCEEEEE-------CCTTCTT---------------CTTC-------------------CSSBSEEECCTTCEEECC
T ss_pred             CCCCCEEEEe-------ccCCCCC---------------CCCC-------------------CcCcCeEEEchhheEECC
Confidence            9999999643       4444332               1223                   399999999999999999


Q ss_pred             CCCCccchhccccchhhhHHHHHHh-cCC-----------CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchH
Q 018022          172 PTVPPNRACLLSCGVSTGVGAAWRT-ANV-----------EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK  238 (362)
Q Consensus       172 ~~l~~~~aa~~~~~~~ta~~~l~~~-~~~-----------~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~  238 (362)
                      +++++++|+++++++.|||+++.+. .++           ++|++|||+|+ |++|++++|+|+++|+ +|+++. +++|
T Consensus       123 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~  200 (371)
T 3gqv_A          123 KGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHN  200 (371)
T ss_dssp             TTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGG
T ss_pred             CCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHH
Confidence            9999999999999999999998777 553           89999999998 9999999999999999 888886 7899


Q ss_pred             HHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHh-ccCCceEEEEccCCC----CCccc
Q 018022          239 FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACC-RKGWGKTIVLGVDQP----GSQLS  313 (362)
Q Consensus       239 ~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l-~~~~G~iv~~G~~~~----~~~~~  313 (362)
                      +++++++|+++++|+++   +++.+.+++++++++|++|||+|++..++.+++++ +++ |+++.+|....    ....+
T Consensus       201 ~~~~~~lGa~~vi~~~~---~~~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~~~~  276 (371)
T 3gqv_A          201 FDLAKSRGAEEVFDYRA---PNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAG-GHYVSLNPFPEHAATRKMVT  276 (371)
T ss_dssp             HHHHHHTTCSEEEETTS---TTHHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTC-EEEEESSCCCC---CCSCEE
T ss_pred             HHHHHHcCCcEEEECCC---chHHHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCC-CEEEEEecCccccccccccc
Confidence            99999999999999988   88999999999888999999999988899999999 587 99999996432    12222


Q ss_pred             cC---HHHHHhcCcEEEEeeccCCCc------cccHHHHHHHHHcCCcccceecc
Q 018022          314 LS---SFEVLHSGKILMGSLFGGLKA------KSDIPILLKRYMDKWSYVPFSGT  359 (362)
Q Consensus       314 ~~---~~~~~~~~~~i~g~~~~~~~~------~~~l~~~l~~~~~g~l~~~~~~~  359 (362)
                      .+   ...++.|++++.|++......      .+.++++++++++|+|++.+..+
T Consensus       277 ~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~  331 (371)
T 3gqv_A          277 TDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRV  331 (371)
T ss_dssp             EEECCGGGGGTSCBSCSTTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEE
T ss_pred             eeeeeeeeeccccccccccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCee
Confidence            22   235777899999875443221      12345889999999999987665

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=2.2e-47  Score=362.96  Aligned_cols=290  Identities=19%  Similarity=0.228  Sum_probs=251.7

Q ss_pred             CcceeeEEEeccCCCc---eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCC
Q 018022           13 KPIQCRAAIATAPGEP---LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGEN   88 (362)
Q Consensus        13 ~~~~~ka~~~~~~~~~---l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~   88 (362)
                      |+|+|||+++.+++++   ++++++|.|+|+++||+|||.+++||++|+..+.|.++. ..+|.++|||++|+|+++|++
T Consensus         1 M~~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~   80 (340)
T 3gms_A            1 MSLHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAF   80 (340)
T ss_dssp             -CCEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEEEEECTT
T ss_pred             CCcccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEEEEeCCC
Confidence            3468999999999987   999999999999999999999999999999999998764 578999999999999999999


Q ss_pred             CCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceE
Q 018022           89 VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVV  168 (362)
Q Consensus        89 v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~  168 (362)
                      +++|++||||+...                              .+                   |+|+||+++|+++++
T Consensus        81 v~~~~vGdrV~~~~------------------------------~~-------------------G~~aey~~v~~~~~~  111 (340)
T 3gms_A           81 VSRELIGKRVLPLR------------------------------GE-------------------GTWQEYVKTSADFVV  111 (340)
T ss_dssp             SCGGGTTCEEEECS------------------------------SS-------------------CSSBSEEEEEGGGEE
T ss_pred             CCCCCCCCEEEecC------------------------------CC-------------------ccceeEEEcCHHHeE
Confidence            99999999997421                              12                   499999999999999


Q ss_pred             EcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC
Q 018022          169 KVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV  247 (362)
Q Consensus       169 ~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~  247 (362)
                      ++|+++++++||++++...|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|+
T Consensus       112 ~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga  190 (340)
T 3gms_A          112 PIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGA  190 (340)
T ss_dssp             ECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTC
T ss_pred             ECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCC
Confidence            999999999999999899999999889999999999999998 6999999999999999 99999999999999999999


Q ss_pred             cEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHh-cCcE
Q 018022          248 TEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLH-SGKI  325 (362)
Q Consensus       248 ~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~-~~~~  325 (362)
                      ++++++.+   .++.+.+++++++ ++|++|||+|++. ....+++++++ |+++.+|...+ .  ++++..+.. +++.
T Consensus       191 ~~~~~~~~---~~~~~~~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~-~--~~~~~~~~~~~~~~  262 (340)
T 3gms_A          191 AYVIDTST---APLYETVMELTNGIGADAAIDSIGGPD-GNELAFSLRPN-GHFLTIGLLSG-I--QVNWAEIVTKAKVH  262 (340)
T ss_dssp             SEEEETTT---SCHHHHHHHHTTTSCEEEEEESSCHHH-HHHHHHTEEEE-EEEEECCCTTS-C--CCCHHHHHHTSCCE
T ss_pred             cEEEeCCc---ccHHHHHHHHhCCCCCcEEEECCCChh-HHHHHHHhcCC-CEEEEEeecCC-C--CCCHHHhhhcccce
Confidence            99999887   7899999999988 9999999999887 56677999997 99999998532 2  345544443 4566


Q ss_pred             EEEeeccCC-------CccccHHHHHHHHHcCCccc-ceeccc
Q 018022          326 LMGSLFGGL-------KAKSDIPILLKRYMDKWSYV-PFSGTR  360 (362)
Q Consensus       326 i~g~~~~~~-------~~~~~l~~~l~~~~~g~l~~-~~~~~~  360 (362)
                      +...++..+       ...++++++++++++|+|++ .++.+|
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~i~~~~  305 (340)
T 3gms_A          263 ANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMKVHSTY  305 (340)
T ss_dssp             EEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEEE
T ss_pred             EEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCCCccccccEEE
Confidence            665543221       11478999999999999998 466554

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=2e-47  Score=365.63  Aligned_cols=303  Identities=19%  Similarity=0.235  Sum_probs=253.2

Q ss_pred             CCCCCCCCCCCCcceeeEEEeccCCCc---eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCcccccc
Q 018022            2 DIEKPSNKTAGKPIQCRAAIATAPGEP---LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHE   77 (362)
Q Consensus         2 ~~~~~~~~~~~~~~~~ka~~~~~~~~~---l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e   77 (362)
                      |..+|.-....+|.+|||+++.+++.+   ++++++|.|+|+++||+|||.++|||++|+..+.|.++. ..+|.++|||
T Consensus        12 ~~~~~~~~~~~m~~~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E   91 (357)
T 1zsy_A           12 DLGTENLYFQSMPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNE   91 (357)
T ss_dssp             CTTCSCCCCCCCCCCEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSC
T ss_pred             CcchhhhhhhhCchhhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccce
Confidence            566666666677888999999999875   889999999999999999999999999999999987654 3579999999


Q ss_pred             ceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeccccccccee
Q 018022           78 AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFS  157 (362)
Q Consensus        78 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a  157 (362)
                      ++|+|+++|++|++|++||||+..+.                             .                   .|+|+
T Consensus        92 ~~G~V~~vG~~v~~~~vGdrV~~~~~-----------------------------~-------------------~G~~a  123 (357)
T 1zsy_A           92 GVAQVVAVGSNVTGLKPGDWVIPANA-----------------------------G-------------------LGTWR  123 (357)
T ss_dssp             CEEEEEEECTTCCSCCTTCEEEESSS-----------------------------C-------------------SCCSB
T ss_pred             EEEEEEEeCCCCCCCCCCCEEEEcCC-----------------------------C-------------------Cccce
Confidence            99999999999999999999985421                             0                   14999


Q ss_pred             eeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC-
Q 018022          158 EYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI-  235 (362)
Q Consensus       158 ~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~-  235 (362)
                      ||+++|++.++++|+++++++||++++.+.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +++++.+. 
T Consensus       124 ey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~  202 (357)
T 1zsy_A          124 TEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDR  202 (357)
T ss_dssp             SEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEECCC
T ss_pred             eEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCC-EEEEEecCc
Confidence            99999999999999999999999999889999998878889999999999998 9999999999999999 55555433 


Q ss_pred             c---hHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC--CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCC
Q 018022          236 S---EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG--GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS  310 (362)
Q Consensus       236 ~---~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~  310 (362)
                      +   +++++++++|+++++++++   . ..+.+.+++.+  ++|++|||+|++. ...++++++++ |+++.+|... ..
T Consensus       203 ~~~~~~~~~~~~lGa~~vi~~~~---~-~~~~~~~~~~~~~~~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~-~~  275 (357)
T 1zsy_A          203 PDIQKLSDRLKSLGAEHVITEEE---L-RRPEMKNFFKDMPQPRLALNCVGGKS-STELLRQLARG-GTMVTYGGMA-KQ  275 (357)
T ss_dssp             SCHHHHHHHHHHTTCSEEEEHHH---H-HSGGGGGTTSSSCCCSEEEESSCHHH-HHHHHTTSCTT-CEEEECCCCT-TC
T ss_pred             cchHHHHHHHHhcCCcEEEecCc---c-hHHHHHHHHhCCCCceEEEECCCcHH-HHHHHHhhCCC-CEEEEEecCC-CC
Confidence            2   3578899999999998643   1 12344555544  5999999999877 56789999997 9999998643 33


Q ss_pred             ccccCHHHHHhcCcEEEEeeccCCC-------ccccHHHHHHHHHcCCcccceeccc
Q 018022          311 QLSLSSFEVLHSGKILMGSLFGGLK-------AKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       311 ~~~~~~~~~~~~~~~i~g~~~~~~~-------~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      ...+++..++.|++++.|++.+.+.       .+++++++++++++|+|++.+..+|
T Consensus       276 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~  332 (357)
T 1zsy_A          276 PVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQV  332 (357)
T ss_dssp             CBCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEE
T ss_pred             CCCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCccceEE
Confidence            4677888888899999998765321       1356899999999999999886654

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.5e-47  Score=365.53  Aligned_cols=290  Identities=19%  Similarity=0.250  Sum_probs=244.8

Q ss_pred             cceeeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCC
Q 018022           14 PIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVD   90 (362)
Q Consensus        14 ~~~~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~   90 (362)
                      +|+|||+++.+++.+  +++++++.|+|+++||+|||.+++||++|++.+.|..+. ..+|.++|||++|+|+++|++++
T Consensus         1 sm~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~   80 (349)
T 4a27_A            1 SMEMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVK   80 (349)
T ss_dssp             CCCEEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECTTCC
T ss_pred             CceeEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEEEeCCCCC
Confidence            368999999999853  999999999999999999999999999999999998654 57899999999999999999999


Q ss_pred             CCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEc
Q 018022           91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV  170 (362)
Q Consensus        91 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~  170 (362)
                      +|++||||+....                              +                   |+|+||+.+|.++++++
T Consensus        81 ~~~~GdrV~~~~~------------------------------~-------------------G~~aey~~v~~~~~~~i  111 (349)
T 4a27_A           81 GYEIGDRVMAFVN------------------------------Y-------------------NAWAEVVCTPVEFVYKI  111 (349)
T ss_dssp             SCCTTCEEEEECS------------------------------S-------------------CCSBSEEEEEGGGEEEC
T ss_pred             CCCCCCEEEEecC------------------------------C-------------------CcceEEEEecHHHeEEC
Confidence            9999999975421                              2                   39999999999999999


Q ss_pred             CCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE
Q 018022          171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE  249 (362)
Q Consensus       171 P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~  249 (362)
                      |+++++++||++++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|..+|++++ ++++++.++ +|+++
T Consensus       112 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~  189 (349)
T 4a27_A          112 PDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTH  189 (349)
T ss_dssp             CTTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSE
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcE
Confidence            9999999999999999999999888899999999999998 99999999999999655899988 577888888 99999


Q ss_pred             EEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCC---------------Ccccc
Q 018022          250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG---------------SQLSL  314 (362)
Q Consensus       250 vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~---------------~~~~~  314 (362)
                      +++ .+   .++.+.+++++++++|++|||+|++. ++.++++++++ |+++.+|.....               ...++
T Consensus       190 ~~~-~~---~~~~~~~~~~~~~g~Dvv~d~~g~~~-~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~  263 (349)
T 4a27_A          190 LFD-RN---ADYVQEVKRISAEGVDIVLDCLCGDN-TGKGLSLLKPL-GTYILYGSSNMVTGETKSFFSFAKSWWQVEKV  263 (349)
T ss_dssp             EEE-TT---SCHHHHHHHHCTTCEEEEEEECC--------CTTEEEE-EEEEEEC-------------------------
T ss_pred             EEc-CC---ccHHHHHHHhcCCCceEEEECCCchh-HHHHHHHhhcC-CEEEEECCCccccccccccccccccccccccc
Confidence            999 55   78999999988669999999999987 68999999998 999999974211               11346


Q ss_pred             CHHHHHhcCcEEEEeeccCCC--------ccccHHHHHHHHHcCCcccceeccc
Q 018022          315 SSFEVLHSGKILMGSLFGGLK--------AKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       315 ~~~~~~~~~~~i~g~~~~~~~--------~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      ++..++.+++++.|+.+..+.        .+++++++++++++|+|++.++++|
T Consensus       264 ~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~  317 (349)
T 4a27_A          264 NPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLW  317 (349)
T ss_dssp             CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSCCCCEEEEE
T ss_pred             CHHHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCCCccccccceE
Confidence            777888999999998764311        1578999999999999999988776

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=6.8e-47  Score=356.84  Aligned_cols=284  Identities=17%  Similarity=0.155  Sum_probs=242.4

Q ss_pred             CcceeeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCC-----CCCCCCccccccceEEEEEe
Q 018022           13 KPIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD-----FPAVFPRILGHEAIGVVESV   85 (362)
Q Consensus        13 ~~~~~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~-----~~~~~p~~~G~e~~G~Vv~v   85 (362)
                      .|++|||+++.+++++  ++++++|.|+|+++||||||.+++||++|++.+.|..     ....+|.++|||++|+|+++
T Consensus         3 ~m~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~v   82 (321)
T 3tqh_A            3 AMKEMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIEL   82 (321)
T ss_dssp             --CEEEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEE
T ss_pred             ccccceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEe
Confidence            4578999999998876  9999999999999999999999999999999998832     23567999999999999999


Q ss_pred             CCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC
Q 018022           86 GENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA  165 (362)
Q Consensus        86 G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~  165 (362)
                      |+++++|++||||+..+..+                          ..+                   |+|+||++++++
T Consensus        83 G~~v~~~~~GdrV~~~~~~~--------------------------~~~-------------------G~~aey~~v~~~  117 (321)
T 3tqh_A           83 GSDVNNVNIGDKVMGIAGFP--------------------------DHP-------------------CCYAEYVCASPD  117 (321)
T ss_dssp             CTTCCSCCTTCEEEEECSTT--------------------------TCC-------------------CCSBSEEEECGG
T ss_pred             CCCCCCCCCCCEEEEccCCC--------------------------CCC-------------------CcceEEEEecHH
Confidence            99999999999998764211                          112                   499999999999


Q ss_pred             ceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEEC-CChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh
Q 018022          166 HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR  244 (362)
Q Consensus       166 ~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G-ag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~  244 (362)
                      .++++|+++++++||++++++.|||+++ +.+++++|++|||+| +|++|++++|+|+.+|+ +|++++ ++++++++++
T Consensus       118 ~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~-~~~~~~~~~~  194 (321)
T 3tqh_A          118 TIIQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHAFLKA  194 (321)
T ss_dssp             GEEECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE-CHHHHHHHHH
T ss_pred             HhccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEe-ccchHHHHHH
Confidence            9999999999999999999999999987 889999999999997 59999999999999999 899887 4667999999


Q ss_pred             cCCcEEEcCCCCCCcc-HHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcC
Q 018022          245 FGVTEFVNSKNCGDKS-VSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSG  323 (362)
Q Consensus       245 ~g~~~vv~~~~~~~~~-~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~  323 (362)
                      +|+++++|+++   .+ +.+.+     .++|++|||+|++. ...++++++++ |+++.+|....    ......+..++
T Consensus       195 lGa~~~i~~~~---~~~~~~~~-----~g~D~v~d~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~----~~~~~~~~~~~  260 (321)
T 3tqh_A          195 LGAEQCINYHE---EDFLLAIS-----TPVDAVIDLVGGDV-GIQSIDCLKET-GCIVSVPTITA----GRVIEVAKQKH  260 (321)
T ss_dssp             HTCSEEEETTT---SCHHHHCC-----SCEEEEEESSCHHH-HHHHGGGEEEE-EEEEECCSTTH----HHHHHHHHHTT
T ss_pred             cCCCEEEeCCC---cchhhhhc-----cCCCEEEECCCcHH-HHHHHHhccCC-CEEEEeCCCCc----hhhhhhhhhcc
Confidence            99999999887   55 54433     37999999999988 59999999998 99999986421    12233466789


Q ss_pred             cEEEEeeccCCCccccHHHHHHHHHcCCcccceeccc
Q 018022          324 KILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       324 ~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      +++.+++..  ...++++++++++++|+|++.++.+|
T Consensus       261 ~~~~~~~~~--~~~~~~~~~~~l~~~g~l~~~i~~~~  295 (321)
T 3tqh_A          261 RRAFGLLKQ--FNIEELHYLGKLVSEDKLRIEISRIF  295 (321)
T ss_dssp             CEEECCCCC--CCHHHHHHHHHHHHTTSSCCCEEEEE
T ss_pred             eEEEEEecC--CCHHHHHHHHHHHHCCCcccccccEE
Confidence            999986432  23688999999999999999988776

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=3.8e-48  Score=364.41  Aligned_cols=278  Identities=17%  Similarity=0.164  Sum_probs=225.4

Q ss_pred             cceeeEEEecc-CCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCC
Q 018022           14 PIQCRAAIATA-PGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGV   92 (362)
Q Consensus        14 ~~~~ka~~~~~-~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~   92 (362)
                      |++|||+++.+ ++. ++++++|.|+|+++||+|||.+++||++|++.+.|..+...+|.++|||++|+|+++|+++++|
T Consensus         2 M~tMka~~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~   80 (315)
T 3goh_A            2 MEQHQVWAYQTKTHS-VTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVPGVDGAGVIVKVGAKVDSK   80 (315)
T ss_dssp             CCEEEEEEEETTTTE-EEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTCCCTTCCCCSEEEEEEEEECTTSCGG
T ss_pred             CcceEEEEEeCCCCe-eEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCcCCCCCEeeeeeEEEEEEeCCCCCCC
Confidence            46799999995 544 9999999999999999999999999999999999988777889999999999999999999999


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCC
Q 018022           93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP  172 (362)
Q Consensus        93 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~  172 (362)
                      ++||||+..+.                           ...+|                   +|+||+++|+++++++|+
T Consensus        81 ~vGdrV~~~~~---------------------------~~~~G-------------------~~aey~~v~~~~~~~iP~  114 (315)
T 3goh_A           81 MLGRRVAYHTS---------------------------LKRHG-------------------SFAEFTVLNTDRVMTLPD  114 (315)
T ss_dssp             GTTCEEEEECC---------------------------TTSCC-------------------SSBSEEEEETTSEEECCT
T ss_pred             CCCCEEEEeCC---------------------------CCCCc-------------------ccccEEEEcHHHhccCcC
Confidence            99999987532                           12233                   999999999999999999


Q ss_pred             CCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022          173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN  252 (362)
Q Consensus       173 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~  252 (362)
                      ++++++||+++++++|||+++ +.+++++|++|||+|+|++|++++|+|+++|+ +|++++ +++|+++++++|++++++
T Consensus       115 ~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~  191 (315)
T 3goh_A          115 NLSFERAAALPCPLLTAWQAF-EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGVRHLYR  191 (315)
T ss_dssp             TSCHHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEEEEES
T ss_pred             CCCHHHHhhCccHHHHHHHHH-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCCEEEc
Confidence            999999999999999999998 88999999999999999999999999999999 999999 899999999999999884


Q ss_pred             CCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeecc
Q 018022          253 SKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG  332 (362)
Q Consensus       253 ~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~  332 (362)
                      . .   +.       + ++++|++|||+|++. +..++++++++ |+++.+|......  .++   ...+++.+....+.
T Consensus       192 d-~---~~-------v-~~g~Dvv~d~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~--~~~---~~~~~~~~~~~~~~  252 (315)
T 3goh_A          192 E-P---SQ-------V-TQKYFAIFDAVNSQN-AAALVPSLKAN-GHIICIQDRIPAP--IDP---AFTRTISYHEIALG  252 (315)
T ss_dssp             S-G---GG-------C-CSCEEEEECC--------TTGGGEEEE-EEEEEECCC---------------CCSEEEEECGG
T ss_pred             C-H---HH-------h-CCCccEEEECCCchh-HHHHHHHhcCC-CEEEEEeCCCCcc--ccc---hhhhcceeeEEEee
Confidence            1 1   11       2 349999999999987 58899999998 9999998643221  221   22334554443322


Q ss_pred             C-----CC-----ccccHHHHHHHHHcCCcccceeccc
Q 018022          333 G-----LK-----AKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       333 ~-----~~-----~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      .     ..     ..++++++++++++|+|++.++.+|
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~  290 (315)
T 3goh_A          253 ALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDIF  290 (315)
T ss_dssp             GHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCCCCEEE
T ss_pred             cccccCChhHHHHHHHHHHHHHHHHHCCCcccccceEe
Confidence            1     11     1235789999999999999888765

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=5.9e-47  Score=363.22  Aligned_cols=295  Identities=18%  Similarity=0.168  Sum_probs=250.6

Q ss_pred             cceeeEEEeccCCCc---eEEEEeecCCCC--CCeEEEEEeeeecchhhhhhhhcCCCC-CCCC---------ccccccc
Q 018022           14 PIQCRAAIATAPGEP---LVIDEVIVDPPN--SHEVRVRIICTSLCHSDVTFWKMKDFP-AVFP---------RILGHEA   78 (362)
Q Consensus        14 ~~~~ka~~~~~~~~~---l~l~~~~~p~~~--~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p---------~~~G~e~   78 (362)
                      |++|||+++.+++++   ++++++|.|+|.  ++||+|||.+++||++|++++.|.++. ..+|         .++|||+
T Consensus         1 ~~~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~   80 (364)
T 1gu7_A            1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEG   80 (364)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCC
T ss_pred             CceEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCcee
Confidence            578999999999874   899999999887  999999999999999999999987653 3456         8999999


Q ss_pred             eEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceee
Q 018022           79 IGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSE  158 (362)
Q Consensus        79 ~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~  158 (362)
                      +|+|+++|++|++|++||||++.+.                             .                   .|+|+|
T Consensus        81 ~G~V~~vG~~v~~~~vGdrV~~~~~-----------------------------~-------------------~G~~ae  112 (364)
T 1gu7_A           81 LFEVIKVGSNVSSLEAGDWVIPSHV-----------------------------N-------------------FGTWRT  112 (364)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEESSS-----------------------------C-------------------CCCSBS
T ss_pred             EEEEEEeCCCCCcCCCCCEEEecCC-----------------------------C-------------------CCcchh
Confidence            9999999999999999999985421                             1                   149999


Q ss_pred             eEEeecCceEEcCC-----------CCCccchhccccchhhhHHHHHHhcCCCCC-CEEEEECC-ChHHHHHHHHHHHcC
Q 018022          159 YTVLDIAHVVKVDP-----------TVPPNRACLLSCGVSTGVGAAWRTANVEVG-STVVIFGL-GSIGLAVAEGARLCG  225 (362)
Q Consensus       159 y~~v~~~~~~~~P~-----------~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g-~~vlI~Ga-g~~G~~a~~la~~~g  225 (362)
                      |+++|++.++++|+           ++++++||++++++.|||+++.+..++++| ++|||+|+ |++|++++|+|+.+|
T Consensus       113 y~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~G  192 (364)
T 1gu7_A          113 HALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLN  192 (364)
T ss_dssp             EEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHT
T ss_pred             eEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCC
Confidence            99999999999998           899999999999999999988766799999 99999998 999999999999999


Q ss_pred             CCEEEEEcCCchH----HHHHHhcCCcEEEcCCCCCCccHHHHHHhhc--CC-CccEEEEcCCCHHHHHHHHHHhccCCc
Q 018022          226 ATRIIGVDVISEK----FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT--DG-GADYCFECVGLASLVQEAYACCRKGWG  298 (362)
Q Consensus       226 ~~~vi~~~~~~~~----~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~--~~-g~d~vid~~g~~~~~~~~~~~l~~~~G  298 (362)
                      + +++++.++.++    .++++++|+++++++++....++.+.+++++  ++ ++|+||||+|+.... .++++++++ |
T Consensus       193 a-~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~~~-~~~~~l~~~-G  269 (364)
T 1gu7_A          193 F-NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSST-GIARKLNNN-G  269 (364)
T ss_dssp             C-EEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHH-HHHHTSCTT-C
T ss_pred             C-EEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchhHH-HHHHHhccC-C
Confidence            9 78888765554    6778899999999875200146788888887  45 899999999988744 889999997 9


Q ss_pred             eEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCCc------cccHHHHHHHHHcCCcccceeccc
Q 018022          299 KTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA------KSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       299 ~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~------~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      +++.+|... ....++++..++.|++++.|++.+.+..      .++++++++++++|+|++.+..+|
T Consensus       270 ~~v~~g~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~  336 (364)
T 1gu7_A          270 LMLTYGGMS-FQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIET  336 (364)
T ss_dssp             EEEECCCCS-SCCEEECHHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEE
T ss_pred             EEEEecCCC-CCCcccCHHHHhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccceEE
Confidence            999999753 3456788888888999999987643211      367999999999999998766554

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=1.5e-46  Score=359.16  Aligned_cols=293  Identities=19%  Similarity=0.249  Sum_probs=252.8

Q ss_pred             CCcceeeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCC
Q 018022           12 GKPIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGEN   88 (362)
Q Consensus        12 ~~~~~~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~   88 (362)
                      ..|++|||+++.+++.+  ++++++|.|+|+++||+|||.++|||++|+..+.|.++. ..+|.++|||++|+|+++|++
T Consensus        18 ~~~~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG~~   97 (354)
T 2j8z_A           18 LYFQSMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPG   97 (354)
T ss_dssp             ---CEEEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEEEECSC
T ss_pred             cchhheeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEECCC
Confidence            57788999999998853  899999999999999999999999999999999987654 357999999999999999999


Q ss_pred             C-CCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCce
Q 018022           89 V-DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV  167 (362)
Q Consensus        89 v-~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~  167 (362)
                      | ++|++||||+...                              .+                   |+|+||+++|++++
T Consensus        98 v~~~~~vGdrV~~~~------------------------------~~-------------------G~~aey~~v~~~~~  128 (354)
T 2j8z_A           98 CQGHWKIGDTAMALL------------------------------PG-------------------GGQAQYVTVPEGLL  128 (354)
T ss_dssp             C--CCCTTCEEEEEC------------------------------SS-------------------CCSBSEEEEEGGGE
T ss_pred             cCCCCCCCCEEEEec------------------------------CC-------------------CcceeEEEeCHHHc
Confidence            9 9999999997531                              11                   39999999999999


Q ss_pred             EEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC
Q 018022          168 VKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG  246 (362)
Q Consensus       168 ~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g  246 (362)
                      +++|+++++++||+++++++|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|
T Consensus       129 ~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g  207 (354)
T 2j8z_A          129 MPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLG  207 (354)
T ss_dssp             EECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHT
T ss_pred             EECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcC
Confidence            9999999999999999899999998878899999999999996 9999999999999999 9999999999999999999


Q ss_pred             CcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCH-HHHHhcCc
Q 018022          247 VTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS-FEVLHSGK  324 (362)
Q Consensus       247 ~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~~  324 (362)
                      ++.++++.+   .++.+.+.+.+++ ++|++|||+|++. ++.++++++++ |+++.+|...+ ...++++ ..++.|++
T Consensus       208 ~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~G~~~-~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~  281 (354)
T 2j8z_A          208 AAAGFNYKK---EDFSEATLKFTKGAGVNLILDCIGGSY-WEKNVNCLALD-GRWVLYGLMGG-GDINGPLFSKLLFKRG  281 (354)
T ss_dssp             CSEEEETTT---SCHHHHHHHHTTTSCEEEEEESSCGGG-HHHHHHHEEEE-EEEEECCCTTC-SCCCSCHHHHHHHTTC
T ss_pred             CcEEEecCC---hHHHHHHHHHhcCCCceEEEECCCchH-HHHHHHhccCC-CEEEEEeccCC-CccCCChhHHHHhCCC
Confidence            999999887   7888999888876 8999999999874 88999999998 99999997543 3356777 78888999


Q ss_pred             EEEEeeccCCCcc------c-cHHHHHHHHHcC---Ccccceeccc
Q 018022          325 ILMGSLFGGLKAK------S-DIPILLKRYMDK---WSYVPFSGTR  360 (362)
Q Consensus       325 ~i~g~~~~~~~~~------~-~l~~~l~~~~~g---~l~~~~~~~~  360 (362)
                      ++.|++++.....      + .++++++++++|   ++++.++.+|
T Consensus       282 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~  327 (354)
T 2j8z_A          282 SLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIY  327 (354)
T ss_dssp             EEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEEEEE
T ss_pred             EEEEEEcccccccccHHHHHHHHHHHHHHHHcCCCccccCccceEE
Confidence            9999876553210      1 134688899999   9998887765

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7.1e-46  Score=354.06  Aligned_cols=289  Identities=20%  Similarity=0.293  Sum_probs=251.8

Q ss_pred             cceeeEEEeccCCCc--eEE-EEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCC
Q 018022           14 PIQCRAAIATAPGEP--LVI-DEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENV   89 (362)
Q Consensus        14 ~~~~ka~~~~~~~~~--l~l-~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v   89 (362)
                      +.+|||+++.+++.+  +++ +++|.|+|+++||+|||.++|||++|+.++.|.++. ..+|.++|||++|+|+++|+++
T Consensus        27 ~~~Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~v  106 (351)
T 1yb5_A           27 QKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNA  106 (351)
T ss_dssp             -CEEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTC
T ss_pred             cceEEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEEECCCC
Confidence            456999999987754  888 899999999999999999999999999999887643 4689999999999999999999


Q ss_pred             CCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEE
Q 018022           90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (362)
Q Consensus        90 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~  169 (362)
                      ++|++||||+..+.                             .+                   |+|+||+++|++++++
T Consensus       107 ~~~~vGdrV~~~~~-----------------------------~~-------------------G~~aey~~v~~~~~~~  138 (351)
T 1yb5_A          107 SAFKKGDRVFTSST-----------------------------IS-------------------GGYAEYALAADHTVYK  138 (351)
T ss_dssp             TTCCTTCEEEESCC-----------------------------SS-------------------CSSBSEEEEEGGGEEE
T ss_pred             CCCCCCCEEEEeCC-----------------------------CC-------------------CcceeEEEECHHHeEE
Confidence            99999999985421                             11                   3999999999999999


Q ss_pred             cCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc
Q 018022          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT  248 (362)
Q Consensus       170 ~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~  248 (362)
                      +|+++++++||++++++.|||+++.+..++++|++|||+|+ |++|++++|+++.+|+ +|+++++++++++.++++|++
T Consensus       139 ~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~  217 (351)
T 1yb5_A          139 LPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAH  217 (351)
T ss_dssp             CCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCS
T ss_pred             CCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHcCCC
Confidence            99999999999999999999999877899999999999998 9999999999999999 999999999999999999999


Q ss_pred             EEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEE
Q 018022          249 EFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM  327 (362)
Q Consensus       249 ~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~  327 (362)
                      .++++.+   .++.+.+.+.+++ ++|++||++|.+. +..++++++++ |+++.+|.. +  ..++++..++.|++++.
T Consensus       218 ~~~d~~~---~~~~~~~~~~~~~~~~D~vi~~~G~~~-~~~~~~~l~~~-G~iv~~g~~-~--~~~~~~~~~~~~~~~i~  289 (351)
T 1yb5_A          218 EVFNHRE---VNYIDKIKKYVGEKGIDIIIEMLANVN-LSKDLSLLSHG-GRVIVVGSR-G--TIEINPRDTMAKESSII  289 (351)
T ss_dssp             EEEETTS---TTHHHHHHHHHCTTCEEEEEESCHHHH-HHHHHHHEEEE-EEEEECCCC-S--CEEECTHHHHTTTCEEE
T ss_pred             EEEeCCC---chHHHHHHHHcCCCCcEEEEECCChHH-HHHHHHhccCC-CEEEEEecC-C--CCccCHHHHHhCCcEEE
Confidence            9999887   7788889888877 8999999999864 88999999998 999999963 2  35677778889999999


Q ss_pred             EeeccCCCccccH----HHHHHHHHcCCcccceeccc
Q 018022          328 GSLFGGLKAKSDI----PILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       328 g~~~~~~~~~~~l----~~~l~~~~~g~l~~~~~~~~  360 (362)
                      |+++.... .+++    +.+++++++|++++.++.+|
T Consensus       290 g~~~~~~~-~~~~~~~~~~l~~~~~~g~l~~~i~~~~  325 (351)
T 1yb5_A          290 GVTLFSST-KEEFQQYAAALQAGMEIGWLKPVIGSQY  325 (351)
T ss_dssp             ECCGGGCC-HHHHHHHHHHHHHHHHHTCCCCCEEEEE
T ss_pred             EEEeecCC-HHHHHHHHHHHHHHHHCCCccCccceEE
Confidence            98654321 2334    45666888999999887765

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=3.9e-46  Score=353.39  Aligned_cols=289  Identities=22%  Similarity=0.278  Sum_probs=248.9

Q ss_pred             eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCC--CC-CCCCccccccceEEEEEeCCCCCC
Q 018022           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD--FP-AVFPRILGHEAIGVVESVGENVDG   91 (362)
Q Consensus        17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~--~~-~~~p~~~G~e~~G~Vv~vG~~v~~   91 (362)
                      |||+++.+++.+  ++++++|.|+|+++||+|||.+++||++|++++.|.+  +. ..+|.++|||++|+|+++|++|++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (333)
T 1wly_A            2 VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTD   81 (333)
T ss_dssp             CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCS
T ss_pred             cEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCC
Confidence            899999998754  8999999999999999999999999999999998865  22 457999999999999999999999


Q ss_pred             CCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 018022           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (362)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P  171 (362)
                      |++||||+..+.                             .+                   |+|+||+++|++.++++|
T Consensus        82 ~~~GdrV~~~~~-----------------------------~~-------------------G~~aey~~v~~~~~~~iP  113 (333)
T 1wly_A           82 FTVGERVCTCLP-----------------------------PL-------------------GAYSQERLYPAEKLIKVP  113 (333)
T ss_dssp             CCTTCEEEECSS-----------------------------SC-------------------CCSBSEEEEEGGGCEECC
T ss_pred             CCCCCEEEEecC-----------------------------CC-------------------CcceeEEEecHHHcEeCC
Confidence            999999974321                             01                   399999999999999999


Q ss_pred             CCCCccc--hhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc
Q 018022          172 PTVPPNR--ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT  248 (362)
Q Consensus       172 ~~l~~~~--aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~  248 (362)
                      +++++++  ||++++++.|||+++.+..++++|++|||+|+ |++|++++|+++.+|+ +|+++++++++++.++++|++
T Consensus       114 ~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~~  192 (333)
T 1wly_A          114 KDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCH  192 (333)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCS
T ss_pred             CCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCC
Confidence            9999999  88888899999999877889999999999997 9999999999999999 999999999999999999999


Q ss_pred             EEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH-HHHhcC--c
Q 018022          249 EFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF-EVLHSG--K  324 (362)
Q Consensus       249 ~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~-~~~~~~--~  324 (362)
                      +++++.+   .++.+.+.+.+.+ ++|++||++|+ ..++.++++++++ |+++.+|...+ ...++++. .++.|+  +
T Consensus       193 ~~~d~~~---~~~~~~i~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~  266 (333)
T 1wly_A          193 HTINYST---QDFAEVVREITGGKGVDVVYDSIGK-DTLQKSLDCLRPR-GMCAAYGHASG-VADPIRVVEDLGVRGSLF  266 (333)
T ss_dssp             EEEETTT---SCHHHHHHHHHTTCCEEEEEECSCT-TTHHHHHHTEEEE-EEEEECCCTTC-CCCCCCHHHHTTTTTSCE
T ss_pred             EEEECCC---HHHHHHHHHHhCCCCCeEEEECCcH-HHHHHHHHhhccC-CEEEEEecCCC-CcCCCChhHhhhhcCCcE
Confidence            9999877   7888888888876 89999999999 4489999999998 99999997532 23467777 778889  9


Q ss_pred             EEEEeeccCCCc----cccHHHHHHHHHcCCcccceeccc
Q 018022          325 ILMGSLFGGLKA----KSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       325 ~i~g~~~~~~~~----~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      ++.|++...+..    .++++++++++++|+|++.++.+|
T Consensus       267 ~i~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~  306 (333)
T 1wly_A          267 ITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLHSSVAKTF  306 (333)
T ss_dssp             EECCCGGGGSCSHHHHHHHHHHHHHHHHTTSCCCCEEEEE
T ss_pred             EEEEeehhhccCHHHHHHHHHHHHHHHHCCCcCCCcceEE
Confidence            999986532211    246899999999999999887765

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7.9e-46  Score=350.34  Aligned_cols=289  Identities=16%  Similarity=0.183  Sum_probs=251.1

Q ss_pred             eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 018022           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE   94 (362)
Q Consensus        17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~   94 (362)
                      |||+++.+++.+  ++++++|.|+|+++||+|||.+++||++|++.+.|.++...+|.++|||++|+|+++|+++++|++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~~   81 (327)
T 1qor_A            2 ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKA   81 (327)
T ss_dssp             CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCT
T ss_pred             cEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCC
Confidence            899999998754  899999999999999999999999999999999987655568999999999999999999999999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022           95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (362)
Q Consensus        95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l  174 (362)
                      ||||. ..                           | ..+                   |+|+||+++|++.++++|+++
T Consensus        82 GdrV~-~~---------------------------g-~~~-------------------G~~aey~~v~~~~~~~iP~~l  113 (327)
T 1qor_A           82 GDRVV-YA---------------------------Q-SAL-------------------GAYSSVHNIIADKAAILPAAI  113 (327)
T ss_dssp             TCEEE-ES---------------------------C-CSS-------------------CCSBSEEEEEGGGEEECCTTS
T ss_pred             CCEEE-EC---------------------------C-CCC-------------------ceeeeEEEecHHHcEECCCCC
Confidence            99994 21                           0 011                   399999999999999999999


Q ss_pred             CccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  253 (362)
Q Consensus       175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~  253 (362)
                      ++++||.++++++|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|+++++++
T Consensus       114 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~~~  192 (327)
T 1qor_A          114 SFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVINY  192 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEEC
Confidence            999999888899999999877889999999999996 9999999999999999 99999999999999999999999998


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhc-CcEEEEeec
Q 018022          254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHS-GKILMGSLF  331 (362)
Q Consensus       254 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~-~~~i~g~~~  331 (362)
                      .+   .++.+.+.+.+.+ ++|++||++| ...++.++++++++ |+++.+|.... ...++++..++.| ++++.+..+
T Consensus       193 ~~---~~~~~~~~~~~~~~~~D~vi~~~g-~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~  266 (327)
T 1qor_A          193 RE---EDLVERLKEITGGKKVRVVYDSVG-RDTWERSLDCLQRR-GLMVSFGNSSG-AVTGVNLGILNQKGSLYVTRPSL  266 (327)
T ss_dssp             TT---SCHHHHHHHHTTTCCEEEEEECSC-GGGHHHHHHTEEEE-EEEEECCCTTC-CCCCBCTHHHHHTTSCEEECCCH
T ss_pred             CC---ccHHHHHHHHhCCCCceEEEECCc-hHHHHHHHHHhcCC-CEEEEEecCCC-CCCccCHHHHhhccceEEEccch
Confidence            77   7888888888876 8999999999 55589999999997 99999997533 2345777778888 888886543


Q ss_pred             cCCC-----ccccHHHHHHHHHcCCccccee--ccc
Q 018022          332 GGLK-----AKSDIPILLKRYMDKWSYVPFS--GTR  360 (362)
Q Consensus       332 ~~~~-----~~~~l~~~l~~~~~g~l~~~~~--~~~  360 (362)
                      +.+.     ..++++++++++++|+|++.++  .+|
T Consensus       267 ~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~  302 (327)
T 1qor_A          267 QGYITTREELTEASNELFSLIASGVIKVDVAEQQKY  302 (327)
T ss_dssp             HHHCCSHHHHHHHHHHHHHHHHTTSSCCCCCGGGEE
T ss_pred             hhhcCCHHHHHHHHHHHHHHHHCCCcccccccCcEE
Confidence            2211     1356899999999999999887  665

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=2.2e-46  Score=353.71  Aligned_cols=288  Identities=15%  Similarity=0.088  Sum_probs=245.0

Q ss_pred             eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 018022           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV   93 (362)
Q Consensus        17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~   93 (362)
                      |||+++.+++++  ++++++|.|+|+++||+|||.+++||++|++.+.|..+. ..+|.++|||++|+|+++|  +++|+
T Consensus         1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~G--v~~~~   78 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASE--DPRFH   78 (324)
T ss_dssp             CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEES--STTCC
T ss_pred             CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEeC--CCCCC
Confidence            899999999975  889999999999999999999999999999999997764 5789999999999999998  57899


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      +||||++.+.                        ..|...+|                   +|+||+.+|+++++++|++
T Consensus        79 vGdrV~~~~~------------------------~~g~~~~G-------------------~~aey~~v~~~~~~~iP~~  115 (324)
T 3nx4_A           79 AGQEVLLTGW------------------------GVGENHWG-------------------GLAERARVKGDWLVALPAG  115 (324)
T ss_dssp             TTCEEEEECT------------------------TBTTTBCC-------------------SSBSEEEECGGGCEECCTT
T ss_pred             CCCEEEEccc------------------------ccCCCCCC-------------------ceeeEEecCHHHcEECCCC
Confidence            9999997641                        12333344                   9999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHH--HhcCCCCCC-EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE
Q 018022          174 VPPNRACLLSCGVSTGVGAAW--RTANVEVGS-TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE  249 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~--~~~~~~~g~-~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~  249 (362)
                      +++++||++++.+.|||+++.  ...++++++ +|||+|+ |++|++++|+|+++|+ +|++++++++|+++++++|+++
T Consensus       116 ~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~  194 (324)
T 3nx4_A          116 LSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGANR  194 (324)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCE
Confidence            999999999999999998865  445666643 4999998 9999999999999999 9999999999999999999999


Q ss_pred             EEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 018022          250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS  329 (362)
Q Consensus       250 vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  329 (362)
                      ++|+++   .+.   +++++++++|++|||+|++ .++.++++++++ |+++.+|... ....+++...++.|++++.|+
T Consensus       195 vi~~~~---~~~---~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~~~~g~  265 (324)
T 3nx4_A          195 ILSRDE---FAE---SRPLEKQLWAGAIDTVGDK-VLAKVLAQMNYG-GCVAACGLAG-GFALPTTVMPFILRNVRLQGV  265 (324)
T ss_dssp             EEEGGG---SSC---CCSSCCCCEEEEEESSCHH-HHHHHHHTEEEE-EEEEECCCTT-CSEEEEESHHHHHHCCEEEEC
T ss_pred             EEecCC---HHH---HHhhcCCCccEEEECCCcH-HHHHHHHHHhcC-CEEEEEecCC-CCCCCCCHHHHhhcCeEEEEE
Confidence            999876   332   4555556899999999987 599999999998 9999999853 344677778888999999998


Q ss_pred             eccCCCc---cccHHHHHHHHHcCCcccceeccc
Q 018022          330 LFGGLKA---KSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       330 ~~~~~~~---~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      +......   .+.++++++++++|+|++. +.+|
T Consensus       266 ~~~~~~~~~~~~~~~~~~~l~~~g~l~~~-~~~~  298 (324)
T 3nx4_A          266 DSVMTPPARRAEAWARLVKDLPESFYAQA-ATEI  298 (324)
T ss_dssp             CSTTCCHHHHHHHHHHHHHHSCHHHHHHH-EEEE
T ss_pred             eccccChHHHHHHHHHHHHHHHcCCCCCC-ceeE
Confidence            7544321   2568889999999998876 5544

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=7.4e-45  Score=348.47  Aligned_cols=286  Identities=19%  Similarity=0.200  Sum_probs=247.3

Q ss_pred             CcceeeEEEeccCCC----ceEE-EEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeC
Q 018022           13 KPIQCRAAIATAPGE----PLVI-DEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVG   86 (362)
Q Consensus        13 ~~~~~ka~~~~~~~~----~l~l-~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG   86 (362)
                      ++.+|||+++.+++.    .+++ +++|.|+|+++||+|||.+++||++|+.++.|.++. ..+|.++|||++|+|+++|
T Consensus        20 ~~~~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G~V~~vG   99 (362)
T 2c0c_A           20 FQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALG   99 (362)
T ss_dssp             HCCEEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEEEEEEEC
T ss_pred             chhhceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEEEEEEEC
Confidence            567899999999874    3889 999999999999999999999999999999987643 4689999999999999999


Q ss_pred             CCCC-CCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC
Q 018022           87 ENVD-GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA  165 (362)
Q Consensus        87 ~~v~-~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~  165 (362)
                      ++|+ +|++||||+...                                                  .|+|+||+++|++
T Consensus       100 ~~V~~~~~vGdrV~~~~--------------------------------------------------~G~~aey~~v~~~  129 (362)
T 2c0c_A          100 LSASARYTVGQAVAYMA--------------------------------------------------PGSFAEYTVVPAS  129 (362)
T ss_dssp             TTGGGTCCTTCEEEEEC--------------------------------------------------SCCSBSEEEEEGG
T ss_pred             CCccCCCCCCCEEEEcc--------------------------------------------------CCcceeEEEEcHH
Confidence            9999 999999998531                                                  1499999999999


Q ss_pred             ceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh
Q 018022          166 HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR  244 (362)
Q Consensus       166 ~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~  244 (362)
                      .++++|+. + .++|+++++++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++++++
T Consensus       130 ~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~  206 (362)
T 2c0c_A          130 IATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKS  206 (362)
T ss_dssp             GCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred             HeEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH
Confidence            99999996 3 4566777799999999888889999999999996 9999999999999999 99999999999999999


Q ss_pred             cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCc---------cccC
Q 018022          245 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ---------LSLS  315 (362)
Q Consensus       245 ~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~---------~~~~  315 (362)
                      +|+++++++++   .++.+.+++.+++++|++|||+|.. .++.++++++++ |+++.+|.......         ..+ 
T Consensus       207 ~Ga~~~~~~~~---~~~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~-  280 (362)
T 2c0c_A          207 LGCDRPINYKT---EPVGTVLKQEYPEGVDVVYESVGGA-MFDLAVDALATK-GRLIVIGFISGYQTPTGLSPVKAGTL-  280 (362)
T ss_dssp             TTCSEEEETTT---SCHHHHHHHHCTTCEEEEEECSCTH-HHHHHHHHEEEE-EEEEECCCGGGTTSSSCCCCCCCTTH-
T ss_pred             cCCcEEEecCC---hhHHHHHHHhcCCCCCEEEECCCHH-HHHHHHHHHhcC-CEEEEEeCCCCcCccccccccccccc-
Confidence            99999999887   7788888887755899999999985 489999999998 99999997532110         022 


Q ss_pred             HHHHHhcCcEEEEeeccCCC--ccccHHHHHHHHHcCCccccee
Q 018022          316 SFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKWSYVPFS  357 (362)
Q Consensus       316 ~~~~~~~~~~i~g~~~~~~~--~~~~l~~~l~~~~~g~l~~~~~  357 (362)
                      ...++.|++++.|++.+.+.  .+++++++++++++|+|++.++
T Consensus       281 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~  324 (362)
T 2c0c_A          281 PAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVD  324 (362)
T ss_dssp             HHHHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCCEE
T ss_pred             HHHHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEeeec
Confidence            25678889999998765442  2467999999999999999876

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=4.3e-44  Score=339.66  Aligned_cols=285  Identities=18%  Similarity=0.160  Sum_probs=246.4

Q ss_pred             ceeeEEEeccC------CCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCcccccc----ceEEEEE
Q 018022           15 IQCRAAIATAP------GEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE----AIGVVES   84 (362)
Q Consensus        15 ~~~ka~~~~~~------~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e----~~G~Vv~   84 (362)
                      ++|||+++...      .+.|+++++|.|+|+++||||||.+++||++|+..+.+... ..+|.++|||    ++|+|++
T Consensus         6 ~~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~-~~~p~~~G~e~g~~~~G~V~~   84 (336)
T 4b7c_A            6 QINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARS-YIPPVGIGEVMRALGVGKVLV   84 (336)
T ss_dssp             CEEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCC-SSCCCCTTSBCCCEEEEEEEE
T ss_pred             ccccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhcccc-cCCCCCCCcccCCceEEEEEe
Confidence            56999999851      12399999999999999999999999999999988876432 3457888888    7999999


Q ss_pred             eCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec
Q 018022           85 VGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI  164 (362)
Q Consensus        85 vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~  164 (362)
                      .  ++++|++||||+..                                                    |+|+||+++|+
T Consensus        85 ~--~v~~~~vGdrV~~~----------------------------------------------------G~~aey~~v~~  110 (336)
T 4b7c_A           85 S--KHPGFQAGDYVNGA----------------------------------------------------LGVQDYFIGEP  110 (336)
T ss_dssp             E--CSTTCCTTCEEEEE----------------------------------------------------CCSBSEEEECC
T ss_pred             c--CCCCCCCCCEEecc----------------------------------------------------CCceEEEEech
Confidence            5  48899999999742                                                    38999999999


Q ss_pred             CceEEcCCCCCccch--hccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHH
Q 018022          165 AHVVKVDPTVPPNRA--CLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI  241 (362)
Q Consensus       165 ~~~~~~P~~l~~~~a--a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~  241 (362)
                      ++++++|++++..++  +.+++++.|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.
T Consensus       111 ~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~  189 (336)
T 4b7c_A          111 KGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRF  189 (336)
T ss_dssp             TTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHH
T ss_pred             HHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHH
Confidence            999999999977776  6788899999999889999999999999998 9999999999999999 99999999999999


Q ss_pred             H-HhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCC-----CCccccC
Q 018022          242 G-KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP-----GSQLSLS  315 (362)
Q Consensus       242 ~-~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~-----~~~~~~~  315 (362)
                      + +++|+++++|+.+   .++.+.+.+.+++++|++||++|++ .++.++++++++ |+++.+|....     ....+++
T Consensus       190 ~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~  264 (336)
T 4b7c_A          190 LVEELGFDGAIDYKN---EDLAAGLKRECPKGIDVFFDNVGGE-ILDTVLTRIAFK-ARIVLCGAISQYNNKEAVRGPAN  264 (336)
T ss_dssp             HHHTTCCSEEEETTT---SCHHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEE-EEEEECCCGGGGC------CCTT
T ss_pred             HHHHcCCCEEEECCC---HHHHHHHHHhcCCCceEEEECCCcc-hHHHHHHHHhhC-CEEEEEeecccccCCcccccchh
Confidence            9 8999999999887   7899999998866999999999975 489999999998 99999997541     1124567


Q ss_pred             HHHHHhcCcEEEEeeccCCCc--cccHHHHHHHHHcCCcccceeccc
Q 018022          316 SFEVLHSGKILMGSLFGGLKA--KSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       316 ~~~~~~~~~~i~g~~~~~~~~--~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      +..++.|++++.|++.+.+..  +++++++++++++|+|++.+..+|
T Consensus       265 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~  311 (336)
T 4b7c_A          265 YLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIVE  311 (336)
T ss_dssp             TTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEEEE
T ss_pred             HHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccceeeec
Confidence            778889999999998765421  377999999999999999988765

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=1.2e-45  Score=349.59  Aligned_cols=295  Identities=15%  Similarity=0.142  Sum_probs=242.0

Q ss_pred             CcceeeEEEeccCCC--ceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCC
Q 018022           13 KPIQCRAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENV   89 (362)
Q Consensus        13 ~~~~~ka~~~~~~~~--~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v   89 (362)
                      ||++|||+++.+++.  .++++++|.|+|+++||+|||.++|||++|++.+.|..+. ..+|.++|||++|+|+++|  +
T Consensus         1 m~~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~~~--v   78 (330)
T 1tt7_A            1 MSTLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSSN--D   78 (330)
T ss_dssp             -CCEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEECS--S
T ss_pred             CCCcceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEEEcC--C
Confidence            466799999999872  3999999999999999999999999999999999886543 4679999999999999974  6


Q ss_pred             CCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEE
Q 018022           90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (362)
Q Consensus        90 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~  169 (362)
                      ++|++||||++.+.                        ..|...+|                   +|+||+++|++.+++
T Consensus        79 ~~~~vGdrV~~~~~------------------------~~g~~~~G-------------------~~aey~~v~~~~~~~  115 (330)
T 1tt7_A           79 PRFAEGDEVIATSY------------------------ELGVSRDG-------------------GLSEYASVPGDWLVP  115 (330)
T ss_dssp             TTCCTTCEEEEEST------------------------TBTTTBCC-------------------SSBSSEEECGGGEEE
T ss_pred             CCCCCCCEEEEccc------------------------ccCCCCCc-------------------cceeEEEecHHHeEE
Confidence            78999999987532                        02222334                   999999999999999


Q ss_pred             cCCCCCccchhccccchhhhHHHHH--HhcCCCCCC-EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc
Q 018022          170 VDPTVPPNRACLLSCGVSTGVGAAW--RTANVEVGS-TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF  245 (362)
Q Consensus       170 ~P~~l~~~~aa~~~~~~~ta~~~l~--~~~~~~~g~-~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~  245 (362)
                      +|+++++++||++++++.|||.++.  ...++++|+ +|||+|+ |++|++++|+|+.+|+ +|++++++++|+++++++
T Consensus       116 iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~l  194 (330)
T 1tt7_A          116 LPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQL  194 (330)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHH
T ss_pred             CCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc
Confidence            9999999999999988999998764  456789996 9999998 9999999999999999 799999999999999999


Q ss_pred             CCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcE
Q 018022          246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKI  325 (362)
Q Consensus       246 g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~  325 (362)
                      |+++++++++   .+ .+.+++++++++|++|||+|++ .++.++++++++ |+++.+|... ....++++..++.|+++
T Consensus       195 Ga~~v~~~~~---~~-~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~~  267 (330)
T 1tt7_A          195 GASEVISRED---VY-DGTLKALSKQQWQGAVDPVGGK-QLASLLSKIQYG-GSVAVSGLTG-GGEVPATVYPFILRGVS  267 (330)
T ss_dssp             TCSEEEEHHH---HC-SSCCCSSCCCCEEEEEESCCTH-HHHHHHTTEEEE-EEEEECCCSS-CSCEEECSHHHHTSCCE
T ss_pred             CCcEEEECCC---ch-HHHHHHhhcCCccEEEECCcHH-HHHHHHHhhcCC-CEEEEEecCC-CCccCcchHHHHhcCeE
Confidence            9999998653   21 1122334434899999999995 589999999998 9999999853 33456777778889999


Q ss_pred             EEEeeccCCC---ccccHHHHHHHHHcCCcccceeccc
Q 018022          326 LMGSLFGGLK---AKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       326 i~g~~~~~~~---~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      +.|++.....   ..+.++++++++++|+|++.++.+|
T Consensus       268 i~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~i~~~~  305 (330)
T 1tt7_A          268 LLGIDSVYCPMDVRAAVWERMSSDLKPDQLLTIVDREV  305 (330)
T ss_dssp             EEECCSSSCCHHHHHHHHHHTTTTSCCSCSTTSEEEEE
T ss_pred             EEEEeccccCHHHHHHHHHHHHHHHhcCCcccccceEE
Confidence            9998532221   1245677788888899998887765

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.1e-44  Score=340.70  Aligned_cols=287  Identities=16%  Similarity=0.104  Sum_probs=232.0

Q ss_pred             cceeeEEEeccCCC--ceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCC
Q 018022           14 PIQCRAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVD   90 (362)
Q Consensus        14 ~~~~ka~~~~~~~~--~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~   90 (362)
                      |++|||+++.+++.  .++++++|.|+|+++||+|||.+++||++|++.+.|..+. ..+|.++|||++|+|+++  +++
T Consensus         1 m~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~--~v~   78 (328)
T 1xa0_A            1 MSAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSS--QHP   78 (328)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEEC--CSS
T ss_pred             CCcceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEEec--CCC
Confidence            34799999999873  3889999999999999999999999999999999886543 467999999999999996  468


Q ss_pred             CCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEc
Q 018022           91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV  170 (362)
Q Consensus        91 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~  170 (362)
                      +|++||||++.+.                        ..|...+|                   +|+||+++|++.++++
T Consensus        79 ~~~vGdrV~~~~~------------------------~~g~~~~G-------------------~~aey~~v~~~~~~~~  115 (328)
T 1xa0_A           79 RFREGDEVIATGY------------------------EIGVTHFG-------------------GYSEYARLHGEWLVPL  115 (328)
T ss_dssp             SCCTTCEEEEEST------------------------TBTTTBCC-------------------SSBSEEEECGGGCEEC
T ss_pred             CCCCCCEEEEccc------------------------cCCCCCCc-------------------cceeEEEechHHeEEC
Confidence            8999999987532                        02222233                   9999999999999999


Q ss_pred             CCCCCccchhccccchhhhHHHHH--HhcCCCCCC-EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC
Q 018022          171 DPTVPPNRACLLSCGVSTGVGAAW--RTANVEVGS-TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG  246 (362)
Q Consensus       171 P~~l~~~~aa~~~~~~~ta~~~l~--~~~~~~~g~-~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g  246 (362)
                      |+++++++|+++++++.|||.++.  ...++++|+ +|||+|+ |++|++++|+|+.+|+ +|++++++++|+++++++|
T Consensus       116 P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lG  194 (328)
T 1xa0_A          116 PKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLG  194 (328)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTT
T ss_pred             CCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcC
Confidence            999999999999988999998764  457889997 9999998 9999999999999999 8999999999999999999


Q ss_pred             CcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEE
Q 018022          247 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKIL  326 (362)
Q Consensus       247 ~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i  326 (362)
                      +++++|+++   .+ .+.++++.++++|++||++|++ .++.++++++++ |+++.+|... ....++++..++.|++++
T Consensus       195 a~~~i~~~~---~~-~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~G~~~-~~~~~~~~~~~~~~~~~i  267 (328)
T 1xa0_A          195 AKEVLARED---VM-AERIRPLDKQRWAAAVDPVGGR-TLATVLSRMRYG-GAVAVSGLTG-GAEVPTTVHPFILRGVSL  267 (328)
T ss_dssp             CSEEEECC-------------CCSCCEEEEEECSTTT-THHHHHHTEEEE-EEEEECSCCS-SSCCCCCSHHHHHTTCEE
T ss_pred             CcEEEecCC---cH-HHHHHHhcCCcccEEEECCcHH-HHHHHHHhhccC-CEEEEEeecC-CCCCCCchhhhhhcCceE
Confidence            999999875   33 3345555544899999999986 489999999998 9999999753 334566767788899999


Q ss_pred             EEeeccCCC---ccccHHHHHHHHHcCCccc
Q 018022          327 MGSLFGGLK---AKSDIPILLKRYMDKWSYV  354 (362)
Q Consensus       327 ~g~~~~~~~---~~~~l~~~l~~~~~g~l~~  354 (362)
                      .|+......   ..+.++++++++++| +++
T Consensus       268 ~g~~~~~~~~~~~~~~~~~~~~~~~~g-l~~  297 (328)
T 1xa0_A          268 LGIDSVYCPMDLRLRIWERLAGDLKPD-LER  297 (328)
T ss_dssp             EECCSSSCCHHHHHHHHHHHHTTTCCC-HHH
T ss_pred             EEEecccCCHHHHHHHHHHHHHHHHcC-Cce
Confidence            998532221   124466777777777 765

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=2e-43  Score=340.10  Aligned_cols=293  Identities=18%  Similarity=0.169  Sum_probs=239.4

Q ss_pred             CCCcceeeEEEeccCCCc--eEE-EEeecCCC-CCCeEEEEEeeeecchhhhhhhhcCCC-------------C--CCCC
Q 018022           11 AGKPIQCRAAIATAPGEP--LVI-DEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDF-------------P--AVFP   71 (362)
Q Consensus        11 ~~~~~~~ka~~~~~~~~~--l~l-~~~~~p~~-~~~eVlVkv~~~~i~~~d~~~~~g~~~-------------~--~~~p   71 (362)
                      +.++++|||+++.+++.+  +++ +++|.|+| +++||+|||.++|||++|++++.|..+             .  ..+|
T Consensus        16 ~~~~~~mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P   95 (375)
T 2vn8_A           16 ENLYFQSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFP   95 (375)
T ss_dssp             --CCCCEEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCS
T ss_pred             cccCccceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCC
Confidence            356778999999998754  888 99999985 999999999999999999999987531             1  2379


Q ss_pred             ccccccceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccc
Q 018022           72 RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFV  151 (362)
Q Consensus        72 ~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~  151 (362)
                      .++|||++|+|+++|++|++|++||||+..+.                           ...+                 
T Consensus        96 ~v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~---------------------------~~~~-----------------  131 (375)
T 2vn8_A           96 LTLGRDVSGVVMECGLDVKYFKPGDEVWAAVP---------------------------PWKQ-----------------  131 (375)
T ss_dssp             BCCCCEEEEEEEEECTTCCSCCTTCEEEEECC---------------------------TTSC-----------------
T ss_pred             cccceeeeEEEEEeCCCCCCCCCCCEEEEecC---------------------------CCCC-----------------
Confidence            99999999999999999999999999986532                           0112                 


Q ss_pred             cccceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHhcC----CCCCCEEEEECC-ChHHHHHHHHHHHcCC
Q 018022          152 SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTAN----VEVGSTVVIFGL-GSIGLAVAEGARLCGA  226 (362)
Q Consensus       152 ~~g~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~----~~~g~~vlI~Ga-g~~G~~a~~la~~~g~  226 (362)
                        |+|+||++++++.++++|+++++++||++++++.|||+++.+.++    +++|++|||+|+ |++|++++|+|+.+|+
T Consensus       132 --G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga  209 (375)
T 2vn8_A          132 --GTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDA  209 (375)
T ss_dssp             --CSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTC
T ss_pred             --ccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCC
Confidence              399999999999999999999999999999899999998877788    999999999995 9999999999999999


Q ss_pred             CEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCH-HHHHHHHHHhccCCceEEEEcc
Q 018022          227 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       227 ~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                       +|++++ +++++++++++|+++++++++   .++.+.+.+.  +++|++|||+|+. ..++.++++++++ |+++.+|.
T Consensus       210 -~Vi~~~-~~~~~~~~~~lGa~~v~~~~~---~~~~~~~~~~--~g~D~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g~  281 (375)
T 2vn8_A          210 -HVTAVC-SQDASELVRKLGADDVIDYKS---GSVEEQLKSL--KPFDFILDNVGGSTETWAPDFLKKWSG-ATYVTLVT  281 (375)
T ss_dssp             -EEEEEE-CGGGHHHHHHTTCSEEEETTS---SCHHHHHHTS--CCBSEEEESSCTTHHHHGGGGBCSSSC-CEEEESCC
T ss_pred             -EEEEEe-ChHHHHHHHHcCCCEEEECCc---hHHHHHHhhc--CCCCEEEECCCChhhhhHHHHHhhcCC-cEEEEeCC
Confidence             899988 678999999999999999887   6777777653  3799999999998 5568899999997 99999996


Q ss_pred             CCCCCccc---cCH------HHHHh-------cCcEEEEeeccCCCccccHHHHHHHHHcCCcccceeccc
Q 018022          306 DQPGSQLS---LSS------FEVLH-------SGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       306 ~~~~~~~~---~~~------~~~~~-------~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      ... ....   ++.      ..++.       ++..+.+.+..  ...++++++++++++|+|++.++.+|
T Consensus       282 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~l~~~g~l~~~i~~~~  349 (375)
T 2vn8_A          282 PFL-LNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFM--ASGPCLDDIAELVDAGKIRPVIEQTF  349 (375)
T ss_dssp             SHH-HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCCC--CCHHHHHHHHHHHHTTSCCCCEEEEE
T ss_pred             Ccc-cccccccccchhheeehhhccccccccccCcceEEEEeC--CCHHHHHHHHHHHHCCCcccCcCeEE
Confidence            421 1110   111      12222       34555443221  12467899999999999999887765

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=1.2e-42  Score=332.48  Aligned_cols=290  Identities=17%  Similarity=0.213  Sum_probs=244.1

Q ss_pred             CCcceeeEEEe-ccC---C----CceEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhhc----CCC-CCCCCcccccc
Q 018022           12 GKPIQCRAAIA-TAP---G----EPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKM----KDF-PAVFPRILGHE   77 (362)
Q Consensus        12 ~~~~~~ka~~~-~~~---~----~~l~l~~~~~p~~-~~~eVlVkv~~~~i~~~d~~~~~g----~~~-~~~~p~~~G~e   77 (362)
                      .+|++|||+++ ..+   +    +.++++++|.|+| +++||+|||.++|||++|+..+.+    .+. ...+|.++|||
T Consensus         4 ~~~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~E   83 (357)
T 2zb4_A            4 AAAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGG   83 (357)
T ss_dssp             --CCEEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEEE
T ss_pred             cccccceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCcccccc
Confidence            57889999999 555   3    2399999999999 999999999999999999987765    222 24678999999


Q ss_pred             ceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeccccccccee
Q 018022           78 AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFS  157 (362)
Q Consensus        78 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a  157 (362)
                      ++|+|++  ++|++|++||||+..                                                   .|+|+
T Consensus        84 ~~G~V~~--~~v~~~~vGdrV~~~---------------------------------------------------~G~~a  110 (357)
T 2zb4_A           84 GIGIIEE--SKHTNLTKGDFVTSF---------------------------------------------------YWPWQ  110 (357)
T ss_dssp             EEEEEEE--ECSTTCCTTCEEEEE---------------------------------------------------EEESB
T ss_pred             EEEEEEe--cCCCCCCCCCEEEec---------------------------------------------------CCCcE
Confidence            9999999  889999999999753                                                   13899


Q ss_pred             eeEEeecCceEEcCCCC-----CccchhccccchhhhHHHHHHhcCCCCC--CEEEEECC-ChHHHHHHHHHHHcCCCEE
Q 018022          158 EYTVLDIAHVVKVDPTV-----PPNRACLLSCGVSTGVGAAWRTANVEVG--STVVIFGL-GSIGLAVAEGARLCGATRI  229 (362)
Q Consensus       158 ~y~~v~~~~~~~~P~~l-----~~~~aa~~~~~~~ta~~~l~~~~~~~~g--~~vlI~Ga-g~~G~~a~~la~~~g~~~v  229 (362)
                      ||+++|.++++++|+++     +++ ++.++++++|||+++.+..++++|  ++|||+|+ |++|++++|+++..|+.+|
T Consensus       111 ey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~V  189 (357)
T 2zb4_A          111 TKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRV  189 (357)
T ss_dssp             SEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEE
T ss_pred             EEEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeE
Confidence            99999999999999999     555 666777999999998788999999  99999998 9999999999999998789


Q ss_pred             EEEcCCchHHHHHHh-cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCC
Q 018022          230 IGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP  308 (362)
Q Consensus       230 i~~~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~  308 (362)
                      +++++++++++.+++ +|+++++++.+   .++.+.+.+.+++++|++||++|. ..++.++++++++ |+++.+|....
T Consensus       190 i~~~~~~~~~~~~~~~~g~~~~~d~~~---~~~~~~~~~~~~~~~d~vi~~~G~-~~~~~~~~~l~~~-G~iv~~G~~~~  264 (357)
T 2zb4_A          190 VGICGTHEKCILLTSELGFDAAINYKK---DNVAEQLRESCPAGVDVYFDNVGG-NISDTVISQMNEN-SHIILCGQISQ  264 (357)
T ss_dssp             EEEESCHHHHHHHHHTSCCSEEEETTT---SCHHHHHHHHCTTCEEEEEESCCH-HHHHHHHHTEEEE-EEEEECCCGGG
T ss_pred             EEEeCCHHHHHHHHHHcCCceEEecCc---hHHHHHHHHhcCCCCCEEEECCCH-HHHHHHHHHhccC-cEEEEECCccc
Confidence            999999999999887 99999999887   788888888876689999999997 4589999999998 99999997532


Q ss_pred             C-CccccC-------HHHHHhcCcEEEEeeccCCC--ccccHHHHHHHHHcCCcccceeccc
Q 018022          309 G-SQLSLS-------SFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       309 ~-~~~~~~-------~~~~~~~~~~i~g~~~~~~~--~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      . ..++++       ...++.|++++.|++++.+.  ..++++++++++++|+|++.+..+|
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~  326 (357)
T 2zb4_A          265 YNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVIN  326 (357)
T ss_dssp             TTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCCCEEEEE
T ss_pred             cccCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcCccceec
Confidence            1 123322       25678899999998764321  1467999999999999999877654

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=5.3e-44  Score=344.52  Aligned_cols=287  Identities=16%  Similarity=0.157  Sum_probs=236.9

Q ss_pred             cceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCC---------------------------
Q 018022           14 PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---------------------------   66 (362)
Q Consensus        14 ~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~---------------------------   66 (362)
                      +.+|||++.......++++++|.|+|+++||||||.+++||++|++++.|..+                           
T Consensus         5 ~~~mka~v~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~~   84 (379)
T 3iup_A            5 ALQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSM   84 (379)
T ss_dssp             EEEEEEEECTTSEEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHHH
T ss_pred             hhhHHHHHhcCCCCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCcccccccc
Confidence            46799999965544599999999999999999999999999999999988521                           


Q ss_pred             --CCCCCccccccceEEEEEeCCCC-CCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 018022           67 --PAVFPRILGHEAIGVVESVGENV-DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLR  143 (362)
Q Consensus        67 --~~~~p~~~G~e~~G~Vv~vG~~v-~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~  143 (362)
                        ...+|.++|||++|+|+++|++| ++|++||||+..+                                         
T Consensus        85 ~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~-----------------------------------------  123 (379)
T 3iup_A           85 AGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIG-----------------------------------------  123 (379)
T ss_dssp             GGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECC-----------------------------------------
T ss_pred             ccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecC-----------------------------------------
Confidence              23578999999999999999999 8999999998542                                         


Q ss_pred             CceecccccccceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEE--CCChHHHHHHHHH
Q 018022          144 GETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF--GLGSIGLAVAEGA  221 (362)
Q Consensus       144 ~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~--Gag~~G~~a~~la  221 (362)
                               .|+|+||+++|+++++++|+++++++||++++...|||+++ +... ++|++|||+  |+|++|++++|+|
T Consensus       124 ---------~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~-~~~~-~~g~~vlV~gag~G~vG~~a~q~a  192 (379)
T 3iup_A          124 ---------GAMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMV-ETMR-LEGHSALVHTAAASNLGQMLNQIC  192 (379)
T ss_dssp             ---------SCCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHH-HHHH-HTTCSCEEESSTTSHHHHHHHHHH
T ss_pred             ---------CCcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHH-HHhc-cCCCEEEEECCCCCHHHHHHHHHH
Confidence                     14999999999999999999999999999999999999754 5555 899999999  4599999999999


Q ss_pred             HHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhc-----c
Q 018022          222 RLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCR-----K  295 (362)
Q Consensus       222 ~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~-----~  295 (362)
                      +++|+ +|++++++++|+++++++|+++++|+++   +++.+.+++++++ ++|++|||+|++..++.++++++     +
T Consensus       193 ~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~---~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~  268 (379)
T 3iup_A          193 LKDGI-KLVNIVRKQEQADLLKAQGAVHVCNAAS---PTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKS  268 (379)
T ss_dssp             HHHTC-CEEEEESSHHHHHHHHHTTCSCEEETTS---TTHHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTT
T ss_pred             HHCCC-EEEEEECCHHHHHHHHhCCCcEEEeCCC---hHHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhcc
Confidence            99999 8999999999999999999999999987   8899999999988 99999999999876788888885     4


Q ss_pred             C----------CceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCCc---c----ccHHHHHHHHHcCCcccceec
Q 018022          296 G----------WGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA---K----SDIPILLKRYMDKWSYVPFSG  358 (362)
Q Consensus       296 ~----------~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~---~----~~l~~~l~~~~~g~l~~~~~~  358 (362)
                      +          +|+++.+|... ..  ++++..++.+++++.|++++.+..   +    +.++++++++++ .+++.++.
T Consensus       269 ~G~~~~~G~~~~g~iv~~G~~~-~~--~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~  344 (379)
T 3iup_A          269 AREYSRYGSTTHKQVYLYGGLD-TS--PTEFNRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-TFASHYSK  344 (379)
T ss_dssp             CCSCCTTCCCSCEEEEECCCSE-EE--EEEECCCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TTCCCCSE
T ss_pred             ccceeecccccCceEEEecCCC-CC--ccccccccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-cCCCcceE
Confidence            3          04555555422 12  233334567899999987655421   2    334666777777 58887776


Q ss_pred             cc
Q 018022          359 TR  360 (362)
Q Consensus       359 ~~  360 (362)
                      +|
T Consensus       345 ~~  346 (379)
T 3iup_A          345 EI  346 (379)
T ss_dssp             EE
T ss_pred             Ee
Confidence            65

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=3.8e-40  Score=312.14  Aligned_cols=285  Identities=16%  Similarity=0.131  Sum_probs=237.2

Q ss_pred             CcceeeEEEeccC--C----CceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeC
Q 018022           13 KPIQCRAAIATAP--G----EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVG   86 (362)
Q Consensus        13 ~~~~~ka~~~~~~--~----~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG   86 (362)
                      .+++|||+++.+.  +    +.++++++|.|+|+++||||||.++|||+.|.. +.   ....+|.++|||++|+|++. 
T Consensus         4 ~~~~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~-~~---~~~~~p~~~g~e~~G~Vv~~-   78 (333)
T 1v3u_A            4 FMVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRI-AS---KRLKEGAVMMGQQVARVVES-   78 (333)
T ss_dssp             CCCEEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHH-HT---TTCCTTSBCCCCEEEEEEEE-
T ss_pred             ccccccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHcc-cc---CcCCCCcccccceEEEEEec-
Confidence            4678999999884  3    239999999999999999999999999998873 21   12356889999999999995 


Q ss_pred             CCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCc
Q 018022           87 ENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH  166 (362)
Q Consensus        87 ~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~  166 (362)
                       ++++|++||||+..                                                    |+|+||++++.++
T Consensus        79 -~v~~~~vGdrV~~~----------------------------------------------------g~~aey~~v~~~~  105 (333)
T 1v3u_A           79 -KNSAFPAGSIVLAQ----------------------------------------------------SGWTTHFISDGKG  105 (333)
T ss_dssp             -SCTTSCTTCEEEEC----------------------------------------------------CCSBSEEEESSTT
T ss_pred             -CCCCCCCCCEEEec----------------------------------------------------CceEEEEEechHH
Confidence             57899999999742                                                    3899999999999


Q ss_pred             eEEcCCC----CCccc-hhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHH
Q 018022          167 VVKVDPT----VPPNR-ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE  240 (362)
Q Consensus       167 ~~~~P~~----l~~~~-aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~  240 (362)
                      ++++|++    +++++ +++++++++|||+++.+..++++|++|||+|+ |++|++++++++..|+ +|+++++++++++
T Consensus       106 ~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~  184 (333)
T 1v3u_A          106 LEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIA  184 (333)
T ss_dssp             EEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHH
T ss_pred             eEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHH
Confidence            9999997    88887 47788899999999878889999999999998 9999999999999999 9999999999999


Q ss_pred             HHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCC----cc-ccC
Q 018022          241 IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS----QL-SLS  315 (362)
Q Consensus       241 ~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~----~~-~~~  315 (362)
                      .++++|++.++|..+  .+++.+.+.+.+.+++|++||++|.+. ++.++++++++ |+++.+|......    .. ..+
T Consensus       185 ~~~~~g~~~~~d~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~  260 (333)
T 1v3u_A          185 YLKQIGFDAAFNYKT--VNSLEEALKKASPDGYDCYFDNVGGEF-LNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPS  260 (333)
T ss_dssp             HHHHTTCSEEEETTS--CSCHHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEE-EEEEECCCCC-------CCBCCC
T ss_pred             HHHhcCCcEEEecCC--HHHHHHHHHHHhCCCCeEEEECCChHH-HHHHHHHHhcC-CEEEEEeccccccCCCCCCCCcC
Confidence            999999999888754  256788888877668999999999865 88999999998 9999999753311    11 236


Q ss_pred             HHHHHhcCcEEEEeeccCCC---ccccHHHHHHHHHcCCcccceeccc
Q 018022          316 SFEVLHSGKILMGSLFGGLK---AKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       316 ~~~~~~~~~~i~g~~~~~~~---~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      +..++.|++++.|++.+.+.   .+++++++++++++|+|++.+..+|
T Consensus       261 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~  308 (333)
T 1v3u_A          261 PESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEHVTK  308 (333)
T ss_dssp             HHHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCCEEEEE
T ss_pred             HHHHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCcccccc
Confidence            67788999999998765432   1467889999999999999876654

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=1.6e-41  Score=317.39  Aligned_cols=271  Identities=18%  Similarity=0.228  Sum_probs=228.6

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVEG   95 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~~G   95 (362)
                      |||+++.+++.+..++++|.|+|+++||+|||.+++||++|++++.|.++. ..+|.++|||++|+|+           |
T Consensus         1 Mka~~~~~~g~~~~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~-----------G   69 (302)
T 1iz0_A            1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE-----------G   69 (302)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET-----------T
T ss_pred             CeEEEEcCCCCchheEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE-----------C
Confidence            799999999876567799999999999999999999999999999986654 4689999999999998           9


Q ss_pred             CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (362)
Q Consensus        96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~  175 (362)
                      |||+..+.                              +                   |+|+||+++|+++++++|++++
T Consensus        70 drV~~~~~------------------------------~-------------------G~~aey~~v~~~~~~~iP~~~~  100 (302)
T 1iz0_A           70 RRYAALVP------------------------------Q-------------------GGLAERVAVPKGALLPLPEGLS  100 (302)
T ss_dssp             EEEEEECS------------------------------S-------------------CCSBSEEEEEGGGCEECCTTCC
T ss_pred             cEEEEecC------------------------------C-------------------cceeeEEEEcHHHcEeCCCCCC
Confidence            99986421                              1                   3999999999999999999999


Q ss_pred             ccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  254 (362)
Q Consensus       176 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~  254 (362)
                      +++||++++++.|||+++.+.. +++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++++++++
T Consensus       101 ~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~  178 (302)
T 1iz0_A          101 PEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATYA  178 (302)
T ss_dssp             HHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEGG
T ss_pred             HHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEECC
Confidence            9999999999999999987677 999999999998 9999999999999999 999999999999999999999998864


Q ss_pred             CCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCC
Q 018022          255 NCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL  334 (362)
Q Consensus       255 ~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  334 (362)
                      +  ..++.+.+     +++|++|| +|+. .++.++++++++ |+++.+|..... ...+++..++.|++++.|++++.+
T Consensus       179 ~--~~~~~~~~-----~~~d~vid-~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~  247 (302)
T 1iz0_A          179 E--VPERAKAW-----GGLDLVLE-VRGK-EVEESLGLLAHG-GRLVYIGAAEGE-VAPIPPLRLMRRNLAVLGFWLTPL  247 (302)
T ss_dssp             G--HHHHHHHT-----TSEEEEEE-CSCT-THHHHHTTEEEE-EEEEEC--------CCCCTTHHHHTTCEEEECCHHHH
T ss_pred             c--chhHHHHh-----cCceEEEE-CCHH-HHHHHHHhhccC-CEEEEEeCCCCC-CCCcCHHHHHhCCCeEEEEeccch
Confidence            2  02333333     47999999 9984 589999999998 999999975432 235666678889999999876422


Q ss_pred             -CccccHHHHHH---HHHcCCcccceeccc
Q 018022          335 -KAKSDIPILLK---RYMDKWSYVPFSGTR  360 (362)
Q Consensus       335 -~~~~~l~~~l~---~~~~g~l~~~~~~~~  360 (362)
                       ...++++++++   ++++|++++.++.+|
T Consensus       248 ~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~  277 (302)
T 1iz0_A          248 LREGALVEEALGFLLPRLGRELRPVVGPVF  277 (302)
T ss_dssp             TTCHHHHHHHHHHHGGGBTTTBCCCEEEEE
T ss_pred             hhhHHHHHHHHhhhHHHHcCCcccccceEE
Confidence             12577999999   999999999887765

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=2.6e-39  Score=307.85  Aligned_cols=288  Identities=17%  Similarity=0.170  Sum_probs=234.3

Q ss_pred             cceeeEEEecc-----CCC-ceEEE--EeecCC-CCCCeEEEEEeeeecchhhhhhhhcCCCC----CCCCccccccceE
Q 018022           14 PIQCRAAIATA-----PGE-PLVID--EVIVDP-PNSHEVRVRIICTSLCHSDVTFWKMKDFP----AVFPRILGHEAIG   80 (362)
Q Consensus        14 ~~~~ka~~~~~-----~~~-~l~l~--~~~~p~-~~~~eVlVkv~~~~i~~~d~~~~~g~~~~----~~~p~~~G~e~~G   80 (362)
                      |++||++++..     ++. .|+++  +++.|. |+++||||||.++++|+.|. .+.|....    ..+|.++|||++|
T Consensus         2 ~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~G   80 (345)
T 2j3h_A            2 TATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQG   80 (345)
T ss_dssp             EEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCEE
T ss_pred             CccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeeec
Confidence            45677776654     442 38888  888887 89999999999999988875 44454322    2468999999999


Q ss_pred             EEEE--eCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceee
Q 018022           81 VVES--VGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSE  158 (362)
Q Consensus        81 ~Vv~--vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~  158 (362)
                      ++++  +|+++++|++||||+..                                                    |+|+|
T Consensus        81 ~~~~GvV~~~v~~~~vGdrV~~~----------------------------------------------------g~~ae  108 (345)
T 2j3h_A           81 YGVSRIIESGHPDYKKGDLLWGI----------------------------------------------------VAWEE  108 (345)
T ss_dssp             EEEEEEEEECSTTCCTTCEEEEE----------------------------------------------------EESBS
T ss_pred             ceEEEEEecCCCCCCCCCEEEee----------------------------------------------------cCcee
Confidence            9999  99999999999999742                                                    38999


Q ss_pred             eEEeecCc--eEEcCC---CCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEE
Q 018022          159 YTVLDIAH--VVKVDP---TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGV  232 (362)
Q Consensus       159 y~~v~~~~--~~~~P~---~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~  232 (362)
                      |++++.+.  ++++|+   +++++ +|+++++++|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++
T Consensus       109 y~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~  186 (345)
T 2j3h_A          109 YSVITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGS  186 (345)
T ss_dssp             EEEECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEE
T ss_pred             EEEecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEE
Confidence            99999876  999996   35555 56777799999999878889999999999998 9999999999999999 99999


Q ss_pred             cCCchHHHHHH-hcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCC--
Q 018022          233 DVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG--  309 (362)
Q Consensus       233 ~~~~~~~~~~~-~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~--  309 (362)
                      ++++++++.++ ++|+++++|+.+  ..++.+.+++.+++++|++||++|.. .++.++++++++ |+++.+|.....  
T Consensus       187 ~~~~~~~~~~~~~~g~~~~~d~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-G~~v~~G~~~~~~~  262 (345)
T 2j3h_A          187 AGSKEKVDLLKTKFGFDDAFNYKE--ESDLTAALKRCFPNGIDIYFENVGGK-MLDAVLVNMNMH-GRIAVCGMISQYNL  262 (345)
T ss_dssp             ESSHHHHHHHHHTSCCSEEEETTS--CSCSHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEE-EEEEECCCGGGTTC
T ss_pred             eCCHHHHHHHHHHcCCceEEecCC--HHHHHHHHHHHhCCCCcEEEECCCHH-HHHHHHHHHhcC-CEEEEEcccccccc
Confidence            99999999998 799999998765  24677888887755899999999984 589999999998 999999975321  


Q ss_pred             --CccccCHHHHHhcCcEEEEeeccCCC--ccccHHHHHHHHHcCCcccceeccc
Q 018022          310 --SQLSLSSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       310 --~~~~~~~~~~~~~~~~i~g~~~~~~~--~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                        ....+++..++.+++++.|++.+.+.  ..+.++++++++++|+|++.++.+|
T Consensus       263 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~  317 (345)
T 2j3h_A          263 ENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVAD  317 (345)
T ss_dssp             SSCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEEEE
T ss_pred             CCccccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCCCCcCcccccC
Confidence              13456667788899999998765431  1234899999999999998777554

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=1.2e-39  Score=340.07  Aligned_cols=280  Identities=19%  Similarity=0.191  Sum_probs=236.4

Q ss_pred             eeEEEeccCCCc--eEEEEeec--CCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCC
Q 018022           17 CRAAIATAPGEP--LVIDEVIV--DPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGV   92 (362)
Q Consensus        17 ~ka~~~~~~~~~--l~l~~~~~--p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~   92 (362)
                      ...+.+..+|.+  |++++.+.  |+|+++||+|||.++|||++|+.++.|.++   .|.++|||++|+|+++|++|++|
T Consensus       210 ~~~l~~~~~G~~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~---~~~~lG~E~aG~V~~vG~~V~~~  286 (795)
T 3slk_A          210 GWRLEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP---GVASLGSEGAGVVVETGPGVTGL  286 (795)
T ss_dssp             SCCEEESSTTSSTTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCS---SCCCSCCCEEEEEEEECSSCCSS
T ss_pred             eEEEecCCCCCccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCC---CCccccceeEEEEEEeCCCCCcC
Confidence            345666666644  88887764  578999999999999999999999988764   36679999999999999999999


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCC
Q 018022           93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP  172 (362)
Q Consensus        93 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~  172 (362)
                      ++||||+...                                                  .|+|+||++++.+.++++|+
T Consensus       287 ~vGDrV~~~~--------------------------------------------------~G~~ae~~~v~~~~~~~iP~  316 (795)
T 3slk_A          287 APGDRVMGMI--------------------------------------------------PKAFGPLAVADHRMVTRIPA  316 (795)
T ss_dssp             CTTCEEEECC--------------------------------------------------SSCSSSEEEEETTSEEECCT
T ss_pred             CCCCEEEEEe--------------------------------------------------cCCCcCEEEeehHHEEECCC
Confidence            9999997431                                                  14999999999999999999


Q ss_pred             CCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE
Q 018022          173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV  251 (362)
Q Consensus       173 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv  251 (362)
                      ++++++||++++.+.|||+++.+.+++++|++|||+|+ |++|++++|+||.+|+ +|+++++++ |.+.++ +|+++++
T Consensus       317 ~ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga-~V~~t~~~~-k~~~l~-lga~~v~  393 (795)
T 3slk_A          317 GWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGA-EVYATASED-KWQAVE-LSREHLA  393 (795)
T ss_dssp             TCCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTC-CEEEECCGG-GGGGSC-SCGGGEE
T ss_pred             CCCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeChH-Hhhhhh-cChhhee
Confidence            99999999999999999999888899999999999997 9999999999999999 899998665 666665 9999999


Q ss_pred             cCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEee
Q 018022          252 NSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL  330 (362)
Q Consensus       252 ~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~  330 (362)
                      ++++   .++.+.+++.+++ |+|+|||++|++. ++.++++++++ |+++.+|.........+.   ...+++++.+..
T Consensus       394 ~~~~---~~~~~~i~~~t~g~GvDvVld~~gg~~-~~~~l~~l~~~-Gr~v~iG~~~~~~~~~~~---~~~~~~~~~~~~  465 (795)
T 3slk_A          394 SSRT---CDFEQQFLGATGGRGVDVVLNSLAGEF-ADASLRMLPRG-GRFLELGKTDVRDPVEVA---DAHPGVSYQAFD  465 (795)
T ss_dssp             CSSS---STHHHHHHHHSCSSCCSEEEECCCTTT-THHHHTSCTTC-EEEEECCSTTCCCHHHHH---HHSSSEEEEECC
T ss_pred             ecCC---hhHHHHHHHHcCCCCeEEEEECCCcHH-HHHHHHHhcCC-CEEEEeccccccCccccc---ccCCCCEEEEee
Confidence            9988   8899999999998 9999999999865 89999999997 999999975433222221   234688887765


Q ss_pred             ccCCC---ccccHHHHHHHHHcCCcccceeccc
Q 018022          331 FGGLK---AKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       331 ~~~~~---~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      +....   ..+.++++++++++|+|++.+..+|
T Consensus       466 l~~~~~~~~~~~l~~~~~l~~~g~l~p~~~~~~  498 (795)
T 3slk_A          466 TVEAGPQRIGEMLHELVELFEGRVLEPLPVTAW  498 (795)
T ss_dssp             GGGGHHHHHHHHHHHHHHHHHTTSCCCCCEEEE
T ss_pred             ccccCHHHHHHHHHHHHHHHHcCCcCCCcceeE
Confidence            42211   1367899999999999999887765

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.96  E-value=1.4e-28  Score=280.94  Aligned_cols=266  Identities=18%  Similarity=0.134  Sum_probs=214.7

Q ss_pred             eEEEEeecCC-CC--CCeEEEEEeeeecchhhhhhhhcCCCCC-------CCCccccccceEEEEEeCCCCCCCCCCCEE
Q 018022           29 LVIDEVIVDP-PN--SHEVRVRIICTSLCHSDVTFWKMKDFPA-------VFPRILGHEAIGVVESVGENVDGVVEGDVV   98 (362)
Q Consensus        29 l~l~~~~~p~-~~--~~eVlVkv~~~~i~~~d~~~~~g~~~~~-------~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V   98 (362)
                      +.+.+.+... +.  ++||+|||.++|+|+.|+.+..|..+..       ..|.++|+|++|+|          ++||+|
T Consensus      1544 l~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V----------~vGdrV 1613 (2512)
T 2vz8_A         1544 IRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRD----------ASGRRV 1613 (2512)
T ss_dssp             EEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEE----------TTSCCE
T ss_pred             eEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEE----------ccCCEE
Confidence            5555554333 22  7899999999999999999998876431       24678999999987          379999


Q ss_pred             EeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccc
Q 018022           99 IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR  178 (362)
Q Consensus        99 ~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~  178 (362)
                      +...                              .+                   |+|+||+++|++.++++|+++++++
T Consensus      1614 ~g~~------------------------------~~-------------------G~~Aeyv~vp~~~v~~iPd~ls~~e 1644 (2512)
T 2vz8_A         1614 MGMV------------------------------PA-------------------EGLATSVLLLQHATWEVPSTWTLEE 1644 (2512)
T ss_dssp             EEEC------------------------------SS-------------------CCSBSEEECCGGGEEECCTTSCHHH
T ss_pred             EEee------------------------------cC-------------------CceeeEEEcccceEEEeCCCCCHHH
Confidence            7431                              12                   3999999999999999999999999


Q ss_pred             hhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcEEEcC
Q 018022          179 ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNS  253 (362)
Q Consensus       179 aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~vv~~  253 (362)
                      ||++++.++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|++.+++    +|+++++++
T Consensus      1645 AA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga-~Viat~~s~~k~~~l~~~~~~lga~~v~~~ 1723 (2512)
T 2vz8_A         1645 AASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGC-RVFTTVGSAEKRAYLQARFPQLDETCFANS 1723 (2512)
T ss_dssp             HTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTCCSTTEEES
T ss_pred             HHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCC-EEEEEeCChhhhHHHHhhcCCCCceEEecC
Confidence            99999999999999888899999999999987 9999999999999999 99999999999999886    788999999


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeecc
Q 018022          254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG  332 (362)
Q Consensus       254 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~  332 (362)
                      ++   .++.+.+++.+++ |+|+|||++++ ..++.++++++++ |+++.+|.........+. ..++.+++++.|+.+.
T Consensus      1724 ~~---~~~~~~i~~~t~g~GvDvVld~~g~-~~l~~~l~~L~~~-Gr~V~iG~~~~~~~~~~~-~~~~~~~~~~~g~~l~ 1797 (2512)
T 2vz8_A         1724 RD---TSFEQHVLRHTAGKGVDLVLNSLAE-EKLQASVRCLAQH-GRFLEIGKFDLSNNHALG-MAVFLKNVTFHGILLD 1797 (2512)
T ss_dssp             SS---SHHHHHHHHTTTSCCEEEEEECCCH-HHHHHHHTTEEEE-EEEEECCCHHHHTTCEEE-GGGGGGCCEEEECCGG
T ss_pred             CC---HHHHHHHHHhcCCCCceEEEECCCc-hHHHHHHHhcCCC-cEEEEeecccccccCccc-ccccccCCcEEEeeHH
Confidence            87   7899999999988 99999999984 5599999999997 999999964211111122 2356689999998765


Q ss_pred             CCC--ccccHHHHHHH----HHcCCcccceeccc
Q 018022          333 GLK--AKSDIPILLKR----YMDKWSYVPFSGTR  360 (362)
Q Consensus       333 ~~~--~~~~l~~~l~~----~~~g~l~~~~~~~~  360 (362)
                      ...  .++++++++++    +++|++++.+..+|
T Consensus      1798 ~~~~~~~~~~~~~l~~l~~~~~~g~l~p~i~~~f 1831 (2512)
T 2vz8_A         1798 SLFEEGGATWQEVSELLKAGIQEGVVQPLKCTVF 1831 (2512)
T ss_dssp             GTTSSCCHHHHHHHHHHHHHHTTTCSCCCCEEEE
T ss_pred             HHhhhCHHHHHHHHHHHHHHHHcCCcCCCcceEe
Confidence            432  12445555555    45788888776665

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.91  E-value=5.3e-24  Score=186.24  Aligned_cols=189  Identities=22%  Similarity=0.234  Sum_probs=145.3

Q ss_pred             CceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH
Q 018022          165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK  243 (362)
Q Consensus       165 ~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~  243 (362)
                      ++++++|+++++++|+++++++.|||+++.+..++++|++|||+|+ |++|++++++++..|+ +|+++++++++.+.++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~   80 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLS   80 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            4688999999999999998899999998877789999999999996 9999999999999999 9999999999999999


Q ss_pred             hcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhc
Q 018022          244 RFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHS  322 (362)
Q Consensus       244 ~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~  322 (362)
                      ++|++.+++..+   .++.+.+.+.+.+ ++|++||++|.. .++.+++.++++ |+++.+|........++++. ++.+
T Consensus        81 ~~g~~~~~d~~~---~~~~~~~~~~~~~~~~D~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~~~  154 (198)
T 1pqw_A           81 RLGVEYVGDSRS---VDFADEILELTDGYGVDVVLNSLAGE-AIQRGVQILAPG-GRFIELGKKDVYADASLGLA-ALAK  154 (198)
T ss_dssp             TTCCSEEEETTC---STHHHHHHHHTTTCCEEEEEECCCTH-HHHHHHHTEEEE-EEEEECSCGGGTTTCEEEGG-GGTT
T ss_pred             HcCCCEEeeCCc---HHHHHHHHHHhCCCCCeEEEECCchH-HHHHHHHHhccC-CEEEEEcCCCCcCcCcCChh-HhcC
Confidence            999998888876   6788888887766 899999999865 489999999998 99999997542122234432 3467


Q ss_pred             CcEEEEeec------cCCCccccHHHHHHHHHcCCcccceeccc
Q 018022          323 GKILMGSLF------GGLKAKSDIPILLKRYMDKWSYVPFSGTR  360 (362)
Q Consensus       323 ~~~i~g~~~------~~~~~~~~l~~~l~~~~~g~l~~~~~~~~  360 (362)
                      ++++.++.+      +.....++++++++++++|+|+|.+..+|
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~  198 (198)
T 1pqw_A          155 SASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLPVTAF  198 (198)
T ss_dssp             TCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCCCC--
T ss_pred             CcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCCCCCcC
Confidence            899987543      11111467999999999999999987765

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=99.14  E-value=3.5e-11  Score=107.80  Aligned_cols=171  Identities=12%  Similarity=0.060  Sum_probs=111.6

Q ss_pred             CCCCCEEEeeC-------CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec
Q 018022           92 VVEGDVVIPHF-------LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI  164 (362)
Q Consensus        92 ~~~Gd~V~~~~-------~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~  164 (362)
                      +++||+|++.+       ...|+.|..|+.+..+.|+....      . .|                   ...++..++.
T Consensus         4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g~------~-~G-------------------~~~~~~~~~~   57 (248)
T 2yvl_A            4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGK------P-EG-------------------VKINGFEVYR   57 (248)
T ss_dssp             CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTTC------C-TT-------------------EEETTEEEEC
T ss_pred             CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcCC------C-CC-------------------CEEEEEEEeC
Confidence            89999999998       78889999999888888864321      0 01                   2223333332


Q ss_pred             CceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh
Q 018022          165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR  244 (362)
Q Consensus       165 ~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~  244 (362)
                      .....+++......++.+. ....+  .+....++.++++||.+|+| .|..+..+++. +. ++++++.+++.++.+++
T Consensus        58 p~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~-~~-~v~~vD~~~~~~~~a~~  131 (248)
T 2yvl_A           58 PTLEEIILLGFERKTQIIY-PKDSF--YIALKLNLNKEKRVLEFGTG-SGALLAVLSEV-AG-EVWTFEAVEEFYKTAQK  131 (248)
T ss_dssp             CCHHHHHHHTSCCSSCCCC-HHHHH--HHHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEECSCHHHHHHHHH
T ss_pred             CCHHHHHHhcCcCCCCccc-chhHH--HHHHhcCCCCCCEEEEeCCC-ccHHHHHHHHh-CC-EEEEEecCHHHHHHHHH
Confidence            2221122111111111111 22222  24567788999999999998 59899999988 66 99999999999888775


Q ss_pred             c----CC-c--EEEcCCCCCCccHHHHHHhhc-CC-CccEEEEcCCCH-HHHHHHHHHhccCCceEEEEcc
Q 018022          245 F----GV-T--EFVNSKNCGDKSVSQIIIDMT-DG-GADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       245 ~----g~-~--~vv~~~~~~~~~~~~~i~~~~-~~-g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      .    +. +  .++..+-      .    +.. .. ++|+|+...+.+ ..++.+.+.|+++ |++++.-.
T Consensus       132 ~~~~~~~~~~~~~~~~d~------~----~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  191 (248)
T 2yvl_A          132 NLKKFNLGKNVKFFNVDF------K----DAEVPEGIFHAAFVDVREPWHYLEKVHKSLMEG-APVGFLLP  191 (248)
T ss_dssp             HHHHTTCCTTEEEECSCT------T----TSCCCTTCBSEEEECSSCGGGGHHHHHHHBCTT-CEEEEEES
T ss_pred             HHHHcCCCCcEEEEEcCh------h----hcccCCCcccEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            3    43 1  2222211      1    112 23 799999988876 6788999999998 99998754

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.90  E-value=1.1e-11  Score=119.71  Aligned_cols=182  Identities=14%  Similarity=0.173  Sum_probs=129.8

Q ss_pred             ccccccceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccc
Q 018022           72 RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFV  151 (362)
Q Consensus        72 ~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~  151 (362)
                      ...|++.++.|.++|++++++.+|+.+++....                                        +......
T Consensus        75 ~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk----------------------------------------~~~~~~~  114 (404)
T 1gpj_A           75 VKRGSEAVRHLFRVASGLESMMVGEQEILRQVK----------------------------------------KAYDRAA  114 (404)
T ss_dssp             EEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHH----------------------------------------HHHHHHH
T ss_pred             eecCchHhhhheeeccCCCCCcCCcchhHHHHH----------------------------------------HHHHHHH
Confidence            457899999999999999999999987421100                                        0000011


Q ss_pred             cccceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHhc---CCCCCCEEEEECCChHHHHHHHHHHHcCCCE
Q 018022          152 SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA---NVEVGSTVVIFGLGSIGLAVAEGARLCGATR  228 (362)
Q Consensus       152 ~~g~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~---~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~  228 (362)
                      ..|++++|...+...++.+|++++.+.++... +..++|.++....   .-.+|++|+|+|+|.+|.++++.++..|+++
T Consensus       115 ~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~~~-~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~  193 (404)
T 1gpj_A          115 RLGTLDEALKIVFRRAINLGKRAREETRISEG-AVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRA  193 (404)
T ss_dssp             HHTCCCHHHHHHHHHHHHHHHHHHHHSSTTCS-CCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSE
T ss_pred             HcCCchHHHHHHHHHHhhhhccCcchhhhcCC-CccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCE
Confidence            12467888888888889999988777766543 6677877653322   1257999999999999999999999999889


Q ss_pred             EEEEcCCchHH-HHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHH--HHHHH--h--ccCCceEE
Q 018022          229 IIGVDVISEKF-EIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQ--EAYAC--C--RKGWGKTI  301 (362)
Q Consensus       229 vi~~~~~~~~~-~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~--~~~~~--l--~~~~G~iv  301 (362)
                      |++++++.+|. ++++++|++ +++.     .++.+.+.     ++|+||+|+|.+..+.  ..+..  +  +++ +.++
T Consensus       194 V~v~~r~~~ra~~la~~~g~~-~~~~-----~~l~~~l~-----~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~-~~~v  261 (404)
T 1gpj_A          194 VLVANRTYERAVELARDLGGE-AVRF-----DELVDHLA-----RSDVVVSATAAPHPVIHVDDVREALRKRDRR-SPIL  261 (404)
T ss_dssp             EEEECSSHHHHHHHHHHHTCE-ECCG-----GGHHHHHH-----TCSEEEECCSSSSCCBCHHHHHHHHHHCSSC-CCEE
T ss_pred             EEEEeCCHHHHHHHHHHcCCc-eecH-----HhHHHHhc-----CCCEEEEccCCCCceecHHHHHHHHHhccCC-CCEE
Confidence            99999999886 677888875 3332     23433332     5999999999764331  44554  4  555 7788


Q ss_pred             EEccC
Q 018022          302 VLGVD  306 (362)
Q Consensus       302 ~~G~~  306 (362)
                      +++..
T Consensus       262 ~vdia  266 (404)
T 1gpj_A          262 IIDIA  266 (404)
T ss_dssp             EEECC
T ss_pred             EEEcc
Confidence            88764

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.87  E-value=1.2e-09  Score=103.81  Aligned_cols=140  Identities=20%  Similarity=0.154  Sum_probs=101.0

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE--EEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE--FVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      +++|+|+|+|++|+++++.++.+|+ +|++++++.+|++.+++++...  +++++.   .++.+.+.     ++|+||+|
T Consensus       167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~-----~~DvVI~~  237 (361)
T 1pjc_A          167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNS---AEIETAVA-----EADLLIGA  237 (361)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCH---HHHHHHHH-----TCSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeCCH---HHHHHHHc-----CCCEEEEC
Confidence            4899999999999999999999999 9999999999999988776533  444433   34444333     59999999


Q ss_pred             CCCHHH------HHHHHHHhccCCceEEEEccCCCCC-----ccccCHHHHHhcCcEEEEeeccCC---------Ccccc
Q 018022          280 VGLASL------VQEAYACCRKGWGKTIVLGVDQPGS-----QLSLSSFEVLHSGKILMGSLFGGL---------KAKSD  339 (362)
Q Consensus       280 ~g~~~~------~~~~~~~l~~~~G~iv~~G~~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~---------~~~~~  339 (362)
                      ++.+..      .+..++.|+++ |+++.++...+..     ..+++...+..+++++.+...-..         .....
T Consensus       238 ~~~~~~~~~~li~~~~~~~~~~g-~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~  316 (361)
T 1pjc_A          238 VLVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNST  316 (361)
T ss_dssp             CCCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHH
T ss_pred             CCcCCCCCCeecCHHHHhhCCCC-CEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHH
Confidence            987542      56778899997 9999998754321     224444445667888887532110         01345


Q ss_pred             HHHHHHHHHcCC
Q 018022          340 IPILLKRYMDKW  351 (362)
Q Consensus       340 l~~~l~~~~~g~  351 (362)
                      ++.+++++++|.
T Consensus       317 ~~~l~~l~~~G~  328 (361)
T 1pjc_A          317 LPYVVKLANQGL  328 (361)
T ss_dssp             HHHHHHHHHHGG
T ss_pred             HHHHHHHHhCCc
Confidence            688889988874

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.73  E-value=2.2e-08  Score=95.38  Aligned_cols=142  Identities=19%  Similarity=0.229  Sum_probs=92.6

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      ++++|+|+|+|.+|+++++.++.+|+ +|++++++.++++.+++ +|.+...+..+  ..++.+.+.     ++|++|+|
T Consensus       165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~~~~~~~~--~~~l~~~~~-----~~DvVi~~  236 (369)
T 2eez_A          165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGGRVITLTAT--EANIKKSVQ-----HADLLIGA  236 (369)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSEEEEECC--HHHHHHHHH-----HCSEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCceEEEecCC--HHHHHHHHh-----CCCEEEEC
Confidence            46899999999999999999999999 99999999999888766 77764333222  133333332     58999999


Q ss_pred             CCCHHH------HHHHHHHhccCCceEEEEccCCCCC-----ccccCHHHHHhcCcEEEEeeccCC---------Ccccc
Q 018022          280 VGLASL------VQEAYACCRKGWGKTIVLGVDQPGS-----QLSLSSFEVLHSGKILMGSLFGGL---------KAKSD  339 (362)
Q Consensus       280 ~g~~~~------~~~~~~~l~~~~G~iv~~G~~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~---------~~~~~  339 (362)
                      ++.+..      .+..++.|+++ |.++.+|...+..     +.+++...+..+++.+.+...-..         ...+.
T Consensus       237 ~g~~~~~~~~li~~~~l~~mk~g-g~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~  315 (369)
T 2eez_A          237 VLVPGAKAPKLVTRDMLSLMKEG-AVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQT  315 (369)
T ss_dssp             CC-------CCSCHHHHTTSCTT-CEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHHH
T ss_pred             CCCCccccchhHHHHHHHhhcCC-CEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHH
Confidence            997642      56788999997 9999998754321     223343445567888776531110         11355


Q ss_pred             HHHHHHHHHcCC
Q 018022          340 IPILLKRYMDKW  351 (362)
Q Consensus       340 l~~~l~~~~~g~  351 (362)
                      ++.+++++.+|.
T Consensus       316 ~~~l~~l~~~g~  327 (369)
T 2eez_A          316 LPYVLKLAEKGL  327 (369)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHHhcCh
Confidence            778888888774

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.73  E-value=1.7e-08  Score=96.66  Aligned_cols=147  Identities=20%  Similarity=0.208  Sum_probs=99.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE-EcCCC----------------CCCccHHH
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKN----------------CGDKSVSQ  263 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v-v~~~~----------------~~~~~~~~  263 (362)
                      ++++|+|+|+|.+|++++++++.+|+ +|++++++.++++.++++|++.+ ++..+                +......+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            68999999999999999999999999 79999999999999989998754 22211                00000122


Q ss_pred             HHHhhcCCCccEEEEcC---CCH--HH-HHHHHHHhccCCceEEEEccCCCC-CccccCHHHHHhcCcEEEEeeccCCCc
Q 018022          264 IIIDMTDGGADYCFECV---GLA--SL-VQEAYACCRKGWGKTIVLGVDQPG-SQLSLSSFEVLHSGKILMGSLFGGLKA  336 (362)
Q Consensus       264 ~i~~~~~~g~d~vid~~---g~~--~~-~~~~~~~l~~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~  336 (362)
                      .+.+... ++|+||+|+   |.+  .. ....++.|+++ +.++.++...+. .....+...+..+++++.|+...   .
T Consensus       250 ~l~~~~~-~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g-~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~~---p  324 (384)
T 1l7d_A          250 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNV---P  324 (384)
T ss_dssp             HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSSG---G
T ss_pred             HHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-CEEEEEecCCCCCeecccCCcEEEECCEEEEEeCCC---c
Confidence            2444443 699999999   532  22 36788999997 999999964221 12222333455678999987532   1


Q ss_pred             cccHHHHHHHHHcCCcc
Q 018022          337 KSDIPILLKRYMDKWSY  353 (362)
Q Consensus       337 ~~~l~~~l~~~~~g~l~  353 (362)
                      ....+++.+++.++.++
T Consensus       325 ~~~~~~a~~l~~~~~~~  341 (384)
T 1l7d_A          325 SRVAADASPLFAKNLLN  341 (384)
T ss_dssp             GGGHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHhHHH
Confidence            23355577777766544

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.68  E-value=2.6e-08  Score=95.09  Aligned_cols=142  Identities=16%  Similarity=0.176  Sum_probs=97.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      ++++|+|+|+|.+|+++++.++.+|+ +|++++++.++++.+++ +|.+..++...  ..++.+.+.     ++|+||+|
T Consensus       167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~~~--~~~l~~~l~-----~aDvVi~~  238 (377)
T 2vhw_A          167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRYSS--AYELEGAVK-----RADLVIGA  238 (377)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEECC--HHHHHHHHH-----HCSEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEeccCC--HHHHHHHHc-----CCCEEEEC
Confidence            58899999999999999999999999 99999999999988876 77653222211  133433332     58999999


Q ss_pred             CCCHHH------HHHHHHHhccCCceEEEEccCCCC-----CccccCHHHHHhcCcEEEEeeccCCCc---------ccc
Q 018022          280 VGLASL------VQEAYACCRKGWGKTIVLGVDQPG-----SQLSLSSFEVLHSGKILMGSLFGGLKA---------KSD  339 (362)
Q Consensus       280 ~g~~~~------~~~~~~~l~~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~~~---------~~~  339 (362)
                      ++.+..      ....++.|+++ |.++.+|...+.     .+.+++...+..+++.+.+...-....         ...
T Consensus       239 ~~~p~~~t~~li~~~~l~~mk~g-~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i~~~phl~~~~~~~as~~~~~~~  317 (377)
T 2vhw_A          239 VLVPGAKAPKLVSNSLVAHMKPG-AVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCVANMPASVPKTSTYALTNAT  317 (377)
T ss_dssp             CCCTTSCCCCCBCHHHHTTSCTT-CEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEEECBTTGGGGSHHHHHHHHHHHH
T ss_pred             CCcCCCCCcceecHHHHhcCCCC-cEEEEEecCCCCccccccCCCCCCCEEEECCEEEEecCCcchhhHHHHHHHHHHHH
Confidence            987653      56788999997 999999864321     233344333455677766543211111         123


Q ss_pred             HHHHHHHHHcCC
Q 018022          340 IPILLKRYMDKW  351 (362)
Q Consensus       340 l~~~l~~~~~g~  351 (362)
                      ++.+++++.+|.
T Consensus       318 ~~~~~~l~~~g~  329 (377)
T 2vhw_A          318 MPYVLELADHGW  329 (377)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCh
Confidence            567777777663

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.55  E-value=4.6e-07  Score=88.90  Aligned_cols=118  Identities=20%  Similarity=0.226  Sum_probs=91.1

Q ss_pred             hhhHHHHHHhcC-CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHH
Q 018022          187 STGVGAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQII  265 (362)
Q Consensus       187 ~ta~~~l~~~~~-~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i  265 (362)
                      .++|+++.+..+ ..+|++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+.+.++++|++ ++        ++.+.+
T Consensus       258 ~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~Ga~-~~--------~l~e~l  327 (494)
T 3ce6_A          258 HSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMMEGFD-VV--------TVEEAI  327 (494)
T ss_dssp             HHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC--------CHHHHG
T ss_pred             hhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCE-Ee--------cHHHHH
Confidence            445555433222 6789999999999999999999999999 999999999999999999985 32        122222


Q ss_pred             HhhcCCCccEEEEcCCCHHHHH-HHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCc
Q 018022          266 IDMTDGGADYCFECVGLASLVQ-EAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGK  324 (362)
Q Consensus       266 ~~~~~~g~d~vid~~g~~~~~~-~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~  324 (362)
                           .++|+|++++|....+. ..++.|+++ |+++.+|...    .+++...++.+.+
T Consensus       328 -----~~aDvVi~atgt~~~i~~~~l~~mk~g-gilvnvG~~~----~eId~~aL~~~aL  377 (494)
T 3ce6_A          328 -----GDADIVVTATGNKDIIMLEHIKAMKDH-AILGNIGHFD----NEIDMAGLERSGA  377 (494)
T ss_dssp             -----GGCSEEEECSSSSCSBCHHHHHHSCTT-CEEEECSSSG----GGBCHHHHHHTTC
T ss_pred             -----hCCCEEEECCCCHHHHHHHHHHhcCCC-cEEEEeCCCC----CccCHHHHHHhhh
Confidence                 25899999999887665 789999997 9999998742    2467666766444

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.54  E-value=1.9e-07  Score=89.72  Aligned_cols=144  Identities=17%  Similarity=0.201  Sum_probs=93.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE-cCCCC--C--------CccH----HHHH
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV-NSKNC--G--------DKSV----SQII  265 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv-~~~~~--~--------~~~~----~~~i  265 (362)
                      ++++|+|+|+|.+|++++++++.+|+ +|++++++.++++.++++|++.+. +..+.  .        ..++    .+.+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l  249 (401)
T 1x13_A          171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF  249 (401)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence            58899999999999999999999999 999999999999999999986542 11000  0        0111    1123


Q ss_pred             HhhcCCCccEEEEcCCCH-----HHH-HHHHHHhccCCceEEEEccCCCCCccccC--HH-HHHhcCcEEEEeeccCCCc
Q 018022          266 IDMTDGGADYCFECVGLA-----SLV-QEAYACCRKGWGKTIVLGVDQPGSQLSLS--SF-EVLHSGKILMGSLFGGLKA  336 (362)
Q Consensus       266 ~~~~~~g~d~vid~~g~~-----~~~-~~~~~~l~~~~G~iv~~G~~~~~~~~~~~--~~-~~~~~~~~i~g~~~~~~~~  336 (362)
                      .+... ++|+||++++.+     ..+ ...++.|+++ +.++.++...+. .++..  .. .+..+++++.|+..  .  
T Consensus       250 ~e~~~-~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g-~vIVdva~~~Gg-~v~~~~~~~p~~~~~gv~i~g~~~--~--  322 (401)
T 1x13_A          250 AAQAK-EVDIIVTTALIPGKPAPKLITREMVDSMKAG-SVIVDLAAQNGG-NCEYTVPGEIFTTENGVKVIGYTD--L--  322 (401)
T ss_dssp             HHHHH-HCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGTC-SBTTCCTTSEEECTTSCEEECCSC--T--
T ss_pred             HHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-cEEEEEcCCCCC-CcCcccCCCceEEECCEEEEeeCC--C--
Confidence            33332 599999995332     223 5788999997 999999964222 22222  11 14567899998743  2  


Q ss_pred             cccHH-HHHHHHHcCCc
Q 018022          337 KSDIP-ILLKRYMDKWS  352 (362)
Q Consensus       337 ~~~l~-~~l~~~~~g~l  352 (362)
                      +..+. .+.+++.++.+
T Consensus       323 p~~~~~~a~~ll~~~~~  339 (401)
T 1x13_A          323 PGRLPTQSSQLYGTNLV  339 (401)
T ss_dssp             GGGSHHHHHHHHHHHHH
T ss_pred             cccCHHHHHHHHHHhHH
Confidence            23332 35555554433

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=98.15  E-value=3.2e-06  Score=76.82  Aligned_cols=102  Identities=18%  Similarity=0.243  Sum_probs=74.6

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHhc----CC-c--EEEcCCCCCCccHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRF----GV-T--EFVNSKNCGDKSVSQI  264 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~~----g~-~--~vv~~~~~~~~~~~~~  264 (362)
                      +.....+.++++||-+|+|. |..+..+++..+ ..++++++.+++.++.+++.    +. +  .++..      ++.+.
T Consensus       104 i~~~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~------d~~~~  176 (277)
T 1o54_A          104 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR------DISEG  176 (277)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC------CGGGC
T ss_pred             HHHHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC------CHHHc
Confidence            45667889999999999987 888888898854 33999999999988877653    53 1  22221      22111


Q ss_pred             HHhhcCCCccEEEEcCCCH-HHHHHHHHHhccCCceEEEEcc
Q 018022          265 IIDMTDGGADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       265 i~~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                         +..+.+|+|+...+.+ ..+..+.+.|+++ |+++++-.
T Consensus       177 ---~~~~~~D~V~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  214 (277)
T 1o54_A          177 ---FDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVCP  214 (277)
T ss_dssp             ---CSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEES
T ss_pred             ---ccCCccCEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence               2223799999877766 6688999999998 99988753

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=98.02  E-value=2.8e-05  Score=74.40  Aligned_cols=101  Identities=17%  Similarity=0.218  Sum_probs=78.4

Q ss_pred             HHHHHHhcC-CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhh
Q 018022          190 VGAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       190 ~~~l~~~~~-~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~  268 (362)
                      +.++.+..+ .-.|.+|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+..         .++.+.+.  
T Consensus       207 ~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~A~~~G~~v---------~~Leeal~--  274 (435)
T 3gvp_A          207 LDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQACMDGFRL---------VKLNEVIR--  274 (435)
T ss_dssp             HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE---------CCHHHHTT--
T ss_pred             HHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHHHHHcCCEe---------ccHHHHHh--
Confidence            344444443 3489999999999999999999999999 9999999988877777777532         12333222  


Q ss_pred             cCCCccEEEEcCCCHHHHH-HHHHHhccCCceEEEEccC
Q 018022          269 TDGGADYCFECVGLASLVQ-EAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       269 ~~~g~d~vid~~g~~~~~~-~~~~~l~~~~G~iv~~G~~  306 (362)
                         ..|+++.|.|....+. +.+..|+++ +.++.+|..
T Consensus       275 ---~ADIVi~atgt~~lI~~e~l~~MK~g-ailINvgrg  309 (435)
T 3gvp_A          275 ---QVDIVITCTGNKNVVTREHLDRMKNS-CIVCNMGHS  309 (435)
T ss_dssp             ---TCSEEEECSSCSCSBCHHHHHHSCTT-EEEEECSST
T ss_pred             ---cCCEEEECCCCcccCCHHHHHhcCCC-cEEEEecCC
Confidence               5899999998777665 889999997 999999864

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.01  E-value=2.3e-05  Score=64.70  Aligned_cols=94  Identities=20%  Similarity=0.158  Sum_probs=66.7

Q ss_pred             hcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCcEEEcCCCCCCccHHHHHHhhcCCCcc
Q 018022          196 TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDGGAD  274 (362)
Q Consensus       196 ~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d  274 (362)
                      .....++.+|+|+|+|.+|+..++.++..|. +|+++++++++.+.++ +.|... +..+.   .+ .+.+.+..-.++|
T Consensus        13 ~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~-~~~d~---~~-~~~l~~~~~~~ad   86 (155)
T 2g1u_A           13 MSKKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFT-VVGDA---AE-FETLKECGMEKAD   86 (155)
T ss_dssp             ----CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEE-EESCT---TS-HHHHHTTTGGGCS
T ss_pred             hhcccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcE-EEecC---CC-HHHHHHcCcccCC
Confidence            3455678999999999999999999999999 9999999999988877 677653 33222   12 2333332112799


Q ss_pred             EEEEcCCCHHHHHHHHHHhcc
Q 018022          275 YCFECVGLASLVQEAYACCRK  295 (362)
Q Consensus       275 ~vid~~g~~~~~~~~~~~l~~  295 (362)
                      +||.+++.......+...++.
T Consensus        87 ~Vi~~~~~~~~~~~~~~~~~~  107 (155)
T 2g1u_A           87 MVFAFTNDDSTNFFISMNARY  107 (155)
T ss_dssp             EEEECSSCHHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHH
Confidence            999999998755566566554

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.98  E-value=1.3e-05  Score=76.50  Aligned_cols=126  Identities=17%  Similarity=0.218  Sum_probs=84.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC-------------CCCCCccH----HH
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS-------------KNCGDKSV----SQ  263 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~-------------~~~~~~~~----~~  263 (362)
                      ++.+|+|+|+|.+|+.++++++.+|+ +|++.+++.++++.++++|.+.+...             ...-.+.+    .+
T Consensus       189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            67899999999999999999999999 99999999999999999987532110             00000011    11


Q ss_pred             HHHhhcCCCccEEEEcCCCH-----H-HHHHHHHHhccCCceEEEEccCCCCCcccc--CHHHHHhcCcEEEEee
Q 018022          264 IIIDMTDGGADYCFECVGLA-----S-LVQEAYACCRKGWGKTIVLGVDQPGSQLSL--SSFEVLHSGKILMGSL  330 (362)
Q Consensus       264 ~i~~~~~~g~d~vid~~g~~-----~-~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~--~~~~~~~~~~~i~g~~  330 (362)
                      .+.+... ++|+||.|+..+     . ..+..++.|+++ +.|+.++...++ .++.  +...+..+++++.+..
T Consensus       268 ~l~e~l~-~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~G-sVIVDvA~d~GG-~~e~t~~~~~~~~~GV~~~gv~  339 (405)
T 4dio_A          268 LVAEHIA-KQDIVITTALIPGRPAPRLVTREMLDSMKPG-SVVVDLAVERGG-NIEGAEAGKVTEVGGVRIVGHL  339 (405)
T ss_dssp             HHHHHHH-TCSEEEECCCCSSSCCCCCBCHHHHTTSCTT-CEEEETTGGGTC-SBTTCCTTEEEEETTEEEEECS
T ss_pred             HHHHHhc-CCCEEEECCcCCCCCCCEEecHHHHhcCCCC-CEEEEEeCCCCC-CccccCCCCeEEECCEEEEEeC
Confidence            2222222 699999996433     1 246899999997 999999864222 1221  1112334578888775

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.98  E-value=9.1e-06  Score=76.89  Aligned_cols=126  Identities=19%  Similarity=0.249  Sum_probs=84.4

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC-CCCCCc------------cHHHHHHh
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS-KNCGDK------------SVSQIIID  267 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~-~~~~~~------------~~~~~i~~  267 (362)
                      ++.+|+|+|+|.+|+.+++.++.+|+ +|++.+++.++++.++++|++.+... +..+..            .-.+.+.+
T Consensus       183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e  261 (381)
T 3p2y_A          183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED  261 (381)
T ss_dssp             CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence            67899999999999999999999999 89999999999999999987642100 000000            01122333


Q ss_pred             hcCCCccEEEEcCCCH-----H-HHHHHHHHhccCCceEEEEccCCCCCccc--cCHHHHHhcCcEEEEee
Q 018022          268 MTDGGADYCFECVGLA-----S-LVQEAYACCRKGWGKTIVLGVDQPGSQLS--LSSFEVLHSGKILMGSL  330 (362)
Q Consensus       268 ~~~~g~d~vid~~g~~-----~-~~~~~~~~l~~~~G~iv~~G~~~~~~~~~--~~~~~~~~~~~~i~g~~  330 (362)
                      ... .+|+||.++..+     . ..+..++.|+++ +.++.++...++. ++  .+...+..+++.+.+..
T Consensus       262 ~l~-~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpG-sVIVDvA~d~GG~-~e~t~~~~~~~~~gV~~~~v~  329 (381)
T 3p2y_A          262 AIT-KFDIVITTALVPGRPAPRLVTAAAATGMQPG-SVVVDLAGETGGN-CELTEPGRTIVHHGVTITSPL  329 (381)
T ss_dssp             HHT-TCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGTCS-BTTCCTTCEEEETTEEEECCS
T ss_pred             HHh-cCCEEEECCCCCCcccceeecHHHHhcCCCC-cEEEEEeCCCCCc-cccccCCCeEEECCEEEEeeC
Confidence            332 699999987332     1 246899999997 9999998653322 22  11111233567777654

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.97  E-value=5.3e-06  Score=67.73  Aligned_cols=107  Identities=12%  Similarity=0.080  Sum_probs=75.8

Q ss_pred             chhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHH-HHhcCCcEEEcCCCCCCccHHH
Q 018022          185 GVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQ  263 (362)
Q Consensus       185 ~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~  263 (362)
                      ++++++.++ +.+....+.+|+|+|+|.+|.+.++.++..|+ +|++.+++.++.+. +++++.+. ...     .++.+
T Consensus         5 ~~sv~~~a~-~~~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~-~v~v~~r~~~~~~~~a~~~~~~~-~~~-----~~~~~   76 (144)
T 3oj0_A            5 KVSIPSIVY-DIVRKNGGNKILLVGNGMLASEIAPYFSYPQY-KVTVAGRNIDHVRAFAEKYEYEY-VLI-----NDIDS   76 (144)
T ss_dssp             CCSHHHHHH-HHHHHHCCCEEEEECCSHHHHHHGGGCCTTTC-EEEEEESCHHHHHHHHHHHTCEE-EEC-----SCHHH
T ss_pred             cccHHHHHH-HHHHhccCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCHHHHHHHHHHhCCce-Eee-----cCHHH
Confidence            345556654 33444459999999999999999999988999 59999999988765 56677542 222     23444


Q ss_pred             HHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022          264 IIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       264 ~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      .+.     ++|+||.+++.+..+. ....++++ +.++.++..
T Consensus        77 ~~~-----~~Divi~at~~~~~~~-~~~~l~~g-~~vid~~~p  112 (144)
T 3oj0_A           77 LIK-----NNDVIITATSSKTPIV-EERSLMPG-KLFIDLGNP  112 (144)
T ss_dssp             HHH-----TCSEEEECSCCSSCSB-CGGGCCTT-CEEEECCSS
T ss_pred             Hhc-----CCCEEEEeCCCCCcEe-eHHHcCCC-CEEEEccCC
Confidence            443     4899999999874222 22677886 888888763

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.92  E-value=0.00012  Score=56.69  Aligned_cols=94  Identities=17%  Similarity=0.146  Sum_probs=65.3

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE-cCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV-NSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      +.+|+|+|+|.+|...++.+...|..+|++++++.++.+.+...+...+. +..+      .+.+.+... ++|+||+++
T Consensus         5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~------~~~~~~~~~-~~d~vi~~~   77 (118)
T 3ic5_A            5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKD------EAGLAKALG-GFDAVISAA   77 (118)
T ss_dssp             CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTC------HHHHHHHTT-TCSEEEECS
T ss_pred             cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCC------HHHHHHHHc-CCCEEEECC
Confidence            46899999999999999999999933899999999999888866665432 2222      234444433 699999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEE
Q 018022          281 GLASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       281 g~~~~~~~~~~~l~~~~G~iv~~  303 (362)
                      +..........+.+.+ -.++.+
T Consensus        78 ~~~~~~~~~~~~~~~g-~~~~~~   99 (118)
T 3ic5_A           78 PFFLTPIIAKAAKAAG-AHYFDL   99 (118)
T ss_dssp             CGGGHHHHHHHHHHTT-CEEECC
T ss_pred             CchhhHHHHHHHHHhC-CCEEEe
Confidence            8765333444444443 444444

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.85  E-value=3.5e-05  Score=70.49  Aligned_cols=99  Identities=13%  Similarity=0.161  Sum_probs=75.5

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc----CCc--EEEcCCCCCCccHHHHHHhh
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVT--EFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~----g~~--~vv~~~~~~~~~~~~~i~~~  268 (362)
                      ..++++++++||.+|+|+.++.++.+|+..|+ +|++++.+++.++.+++.    |.+  .++..+.   .+       +
T Consensus       116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa---~~-------l  184 (298)
T 3fpf_A          116 ALGRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDE---TV-------I  184 (298)
T ss_dssp             HHTTCCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCG---GG-------G
T ss_pred             HHcCCCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEECch---hh-------C
Confidence            45788999999999999878888888888898 999999999998887753    542  2333222   22       2


Q ss_pred             cCCCccEEEEcCCCH---HHHHHHHHHhccCCceEEEEcc
Q 018022          269 TDGGADYCFECVGLA---SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       269 ~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      .++.||+|+.....+   ..++.+.+.|+++ |++++...
T Consensus       185 ~d~~FDvV~~~a~~~d~~~~l~el~r~LkPG-G~Lvv~~~  223 (298)
T 3fpf_A          185 DGLEFDVLMVAALAEPKRRVFRNIHRYVDTE-TRIIYRTY  223 (298)
T ss_dssp             GGCCCSEEEECTTCSCHHHHHHHHHHHCCTT-CEEEEEEC
T ss_pred             CCCCcCEEEECCCccCHHHHHHHHHHHcCCC-cEEEEEcC
Confidence            234899999866543   5688999999998 99997754

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.83  E-value=0.0002  Score=60.59  Aligned_cols=96  Identities=16%  Similarity=0.225  Sum_probs=69.0

Q ss_pred             CCEEEEECCChHHHHHHHHHHHc-CCCEEEEEcCCchHHHHHHhcCCcEEE-cCCCCCCccHHHHHHhhcCC-CccEEEE
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFV-NSKNCGDKSVSQIIIDMTDG-GADYCFE  278 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~~i~~~~~~-g~d~vid  278 (362)
                      +++|+|+|.|.+|...++.++.. |+ +|+++++++++.+.+++.|...+. |..+      .+.+.+.++- ++|++|.
T Consensus        39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~gd~~~------~~~l~~~~~~~~ad~vi~  111 (183)
T 3c85_A           39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEGRNVISGDATD------PDFWERILDTGHVKLVLL  111 (183)
T ss_dssp             TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEECCTTC------HHHHHTBCSCCCCCEEEE
T ss_pred             CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCCCCEEEcCCCC------HHHHHhccCCCCCCEEEE
Confidence            67899999999999999999998 99 899999999999999888876544 3222      2334444223 7999999


Q ss_pred             cCCCHHHHHHHHHHhccC--CceEEEEc
Q 018022          279 CVGLASLVQEAYACCRKG--WGKTIVLG  304 (362)
Q Consensus       279 ~~g~~~~~~~~~~~l~~~--~G~iv~~G  304 (362)
                      +++.......+...++..  ..+++...
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~ii~~~  139 (183)
T 3c85_A          112 AMPHHQGNQTALEQLQRRNYKGQIAAIA  139 (183)
T ss_dssp             CCSSHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred             eCCChHHHHHHHHHHHHHCCCCEEEEEE
Confidence            999876444444444442  14666543

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=97.80  E-value=2.1e-05  Score=70.79  Aligned_cols=94  Identities=16%  Similarity=0.160  Sum_probs=69.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHc-CCCEEEEEcCCchHHHHHHhcCCc-EEEcCCCCCCccHHHHHHhhcCCCccEEE
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTDGGADYCF  277 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~i~~~~~~g~d~vi  277 (362)
                      .++.+||.+|+|. |..+..+++.. +. ++++++.+++.++.+++.+.. .++..+.   .++     .+..+.+|+|+
T Consensus        84 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~---~~~-----~~~~~~fD~v~  153 (269)
T 1p91_A           84 DKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASS---HRL-----PFSDTSMDAII  153 (269)
T ss_dssp             TTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCT---TSC-----SBCTTCEEEEE
T ss_pred             CCCCEEEEECCCC-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHhCCCcEEEEcch---hhC-----CCCCCceeEEE
Confidence            6789999999988 88888999886 66 999999999999998876532 3333222   111     12223799999


Q ss_pred             EcCCCHHHHHHHHHHhccCCceEEEEcc
Q 018022          278 ECVGLASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       278 d~~g~~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      .. .....+..+.+.|+++ |+++++..
T Consensus       154 ~~-~~~~~l~~~~~~L~pg-G~l~~~~~  179 (269)
T 1p91_A          154 RI-YAPCKAEELARVVKPG-GWVITATP  179 (269)
T ss_dssp             EE-SCCCCHHHHHHHEEEE-EEEEEEEE
T ss_pred             Ee-CChhhHHHHHHhcCCC-cEEEEEEc
Confidence            64 4455589999999998 99988754

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.78  E-value=0.00015  Score=69.47  Aligned_cols=120  Identities=18%  Similarity=0.173  Sum_probs=89.2

Q ss_pred             HHHHHhcCC-CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhc
Q 018022          191 GAAWRTANV-EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       191 ~~l~~~~~~-~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~  269 (362)
                      .++.+..+. -.|.+|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+..         .++.+.+.   
T Consensus       199 dgi~ratg~~L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~p~~a~~A~~~G~~~---------~sL~eal~---  265 (436)
T 3h9u_A          199 DGIKRATDVMIAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVDPINALQAAMEGYQV---------LLVEDVVE---  265 (436)
T ss_dssp             HHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE---------CCHHHHTT---
T ss_pred             HHHHHhcCCcccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCChhhhHHHHHhCCee---------cCHHHHHh---
Confidence            334343343 368999999999999999999999999 9999999988887777777642         12333332   


Q ss_pred             CCCccEEEEcCCCHHHHH-HHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEee
Q 018022          270 DGGADYCFECVGLASLVQ-EAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL  330 (362)
Q Consensus       270 ~~g~d~vid~~g~~~~~~-~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~  330 (362)
                        ..|+++.+.+....+. ..+..|+++ ..++.+|..    +.+++...+..+..++.+..
T Consensus       266 --~ADVVilt~gt~~iI~~e~l~~MK~g-AIVINvgRg----~vEID~~~L~~~~~~~~~ir  320 (436)
T 3h9u_A          266 --EAHIFVTTTGNDDIITSEHFPRMRDD-AIVCNIGHF----DTEIQVAWLKANAKERVEVK  320 (436)
T ss_dssp             --TCSEEEECSSCSCSBCTTTGGGCCTT-EEEEECSSS----GGGBCHHHHHHHCSEEEEEE
T ss_pred             --hCCEEEECCCCcCccCHHHHhhcCCC-cEEEEeCCC----CCccCHHHHHhhcCceEeec
Confidence              4899999998766554 778899997 888888742    45688887777666655544

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.76  E-value=0.00015  Score=66.40  Aligned_cols=111  Identities=17%  Similarity=0.187  Sum_probs=80.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      -.|.+|+|+|.|.+|.++++.++..|+ +|++.+++.++.+.++++|+.. ++.     .++.+.+     ...|+|+.+
T Consensus       153 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~-~~~-----~~l~~~l-----~~aDvVi~~  220 (293)
T 3d4o_A          153 IHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGMEP-FHI-----SKAAQEL-----RDVDVCINT  220 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTSEE-EEG-----GGHHHHT-----TTCSEEEEC
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCee-cCh-----hhHHHHh-----cCCCEEEEC
Confidence            368899999999999999999999999 9999999988887777888653 322     1232222     258999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEE
Q 018022          280 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM  327 (362)
Q Consensus       280 ~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~  327 (362)
                      ++....-...+..|+++ +.++.++..+.  ..++  .....+++.+.
T Consensus       221 ~p~~~i~~~~l~~mk~~-~~lin~ar~~~--~~~~--~~a~~~Gv~~~  263 (293)
T 3d4o_A          221 IPALVVTANVLAEMPSH-TFVIDLASKPG--GTDF--RYAEKRGIKAL  263 (293)
T ss_dssp             CSSCCBCHHHHHHSCTT-CEEEECSSTTC--SBCH--HHHHHHTCEEE
T ss_pred             CChHHhCHHHHHhcCCC-CEEEEecCCCC--CCCH--HHHHHCCCEEE
Confidence            98643224677889997 99999986322  2223  44444566664

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.71  E-value=2.8e-05  Score=72.64  Aligned_cols=105  Identities=19%  Similarity=0.214  Sum_probs=70.3

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHhc----C-------------CcEEEcCC
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRF----G-------------VTEFVNSK  254 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~~----g-------------~~~vv~~~  254 (362)
                      +.....+.++++||-+|+|. |..+..+++..|. .+|++++.+++.++.+++.    +             .-.++..+
T Consensus        97 ~l~~l~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d  175 (336)
T 2b25_A           97 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  175 (336)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECC
Confidence            34566889999999999977 8888888887663 4999999999888877652    1             11233222


Q ss_pred             CCCCccHHHHHHhhcCCCccEEEEcCCCH-HHHHHHHHHhccCCceEEEEcc
Q 018022          255 NCGDKSVSQIIIDMTDGGADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       255 ~~~~~~~~~~i~~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      -   .+..   ..+..+.||+|+-....+ ..+..+.+.|+++ |+++++..
T Consensus       176 ~---~~~~---~~~~~~~fD~V~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  220 (336)
T 2b25_A          176 I---SGAT---EDIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYVV  220 (336)
T ss_dssp             T---TCCC----------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEES
T ss_pred             h---HHcc---cccCCCCeeEEEECCCCHHHHHHHHHHhcCCC-cEEEEEeC
Confidence            2   1111   112223699999766655 3478999999998 99997753

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.70  E-value=0.00017  Score=69.22  Aligned_cols=92  Identities=17%  Similarity=0.138  Sum_probs=73.6

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      .-.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+.. +        ++.+.++     ..|+|+.
T Consensus       244 ~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~~~G~~v-v--------~LeElL~-----~ADIVv~  308 (464)
T 3n58_A          244 MMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAAMDGFEV-V--------TLDDAAS-----TADIVVT  308 (464)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEE-C--------CHHHHGG-----GCSEEEE
T ss_pred             cccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHHhcCcee-c--------cHHHHHh-----hCCEEEE
Confidence            4588999999999999999999999999 9999998887766666667642 1        2333332     4899999


Q ss_pred             cCCCHHHH-HHHHHHhccCCceEEEEccC
Q 018022          279 CVGLASLV-QEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       279 ~~g~~~~~-~~~~~~l~~~~G~iv~~G~~  306 (362)
                      ++|....+ .+.+..|+++ +.++.+|..
T Consensus       309 atgt~~lI~~e~l~~MK~G-AILINvGRg  336 (464)
T 3n58_A          309 TTGNKDVITIDHMRKMKDM-CIVGNIGHF  336 (464)
T ss_dssp             CCSSSSSBCHHHHHHSCTT-EEEEECSSS
T ss_pred             CCCCccccCHHHHhcCCCC-eEEEEcCCC
Confidence            99987655 5889999997 999999864

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.65  E-value=0.00067  Score=60.54  Aligned_cols=103  Identities=11%  Similarity=0.058  Sum_probs=68.2

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccEEEE
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADYCFE  278 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d~vid  278 (362)
                      .+|||+|+ +++|++.++.+...|+ +|+.+++++++.+.+.+-+... .+.-+-.+++++.+.+.+...  +++|++++
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN   81 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN   81 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            68999987 9999999999999999 9999999998887776644432 222111011233333332222  37999999


Q ss_pred             cCCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          279 CVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       279 ~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      +.|..                         ...+.+...|.+++|+|+.++..
T Consensus        82 NAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~  134 (247)
T 3ged_A           82 NACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIAST  134 (247)
T ss_dssp             CCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCG
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeec
Confidence            98752                         12344555655434999999764

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.65  E-value=0.00027  Score=64.05  Aligned_cols=104  Identities=20%  Similarity=0.243  Sum_probs=72.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d~  275 (362)
                      +|.++||+|+ +++|++.++.+...|+ +|+++++++++++.+ +++|... .+..+-.+.+++.+.+.+...  |++|+
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi  106 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV  106 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6889999998 9999999999999999 999999999987764 4566432 222111012333333333222  37999


Q ss_pred             EEEcCCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          276 CFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       276 vid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      ++++.|..                         ...+.++..|+++ |+|+.++..
T Consensus       107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~-G~IInisS~  161 (273)
T 4fgs_A          107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG-SSVVLTGST  161 (273)
T ss_dssp             EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE-EEEEEECCG
T ss_pred             EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC-CeEEEEeeh
Confidence            99999862                         2355677888886 999999754

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.63  E-value=0.00027  Score=63.81  Aligned_cols=103  Identities=19%  Similarity=0.239  Sum_probs=73.7

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHhc-----C--Cc--EEEcCCCCCCccHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRF-----G--VT--EFVNSKNCGDKSVS  262 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~~-----g--~~--~vv~~~~~~~~~~~  262 (362)
                      +.....++++++||-+|+| .|..+..+++..+ ..++++++.+++..+.+++.     |  .+  .++..+      +.
T Consensus        91 i~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d------~~  163 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSD------LA  163 (280)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSC------GG
T ss_pred             HHHHcCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECc------hH
Confidence            4566788999999999998 6888888888753 33999999999988877653     4  22  233222      11


Q ss_pred             HHHHhhcCCCccEEEEcCCCH-HHHHHHHHHhccCCceEEEEcc
Q 018022          263 QIIIDMTDGGADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       263 ~~i~~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      +.  .+..+.+|+|+.....+ ..+..+.+.|+++ |+++++..
T Consensus       164 ~~--~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  204 (280)
T 1i9g_A          164 DS--ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYVA  204 (280)
T ss_dssp             GC--CCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred             hc--CCCCCceeEEEECCcCHHHHHHHHHHhCCCC-CEEEEEeC
Confidence            11  11123799999877765 6688999999998 99988754

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.59  E-value=0.00097  Score=53.80  Aligned_cols=97  Identities=9%  Similarity=0.093  Sum_probs=69.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      -.++|+|.|.|.+|...++.++..|. .|+++++++++.+.+++.|...+.- +.    .-.+.+.+..-..+|++|.++
T Consensus         6 ~~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~g-d~----~~~~~l~~a~i~~ad~vi~~~   79 (140)
T 3fwz_A            6 ICNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRERGVRAVLG-NA----ANEEIMQLAHLECAKWLILTI   79 (140)
T ss_dssp             CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEES-CT----TSHHHHHHTTGGGCSEEEECC
T ss_pred             CCCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHcCCCEEEC-CC----CCHHHHHhcCcccCCEEEEEC
Confidence            35689999999999999999999999 9999999999999999888765442 21    112233332112799999999


Q ss_pred             CCHHHHH---HHHHHhccCCceEEEEc
Q 018022          281 GLASLVQ---EAYACCRKGWGKTIVLG  304 (362)
Q Consensus       281 g~~~~~~---~~~~~l~~~~G~iv~~G  304 (362)
                      +......   ...+.+.+. .+++...
T Consensus        80 ~~~~~n~~~~~~a~~~~~~-~~iiar~  105 (140)
T 3fwz_A           80 PNGYEAGEIVASARAKNPD-IEIIARA  105 (140)
T ss_dssp             SCHHHHHHHHHHHHHHCSS-SEEEEEE
T ss_pred             CChHHHHHHHHHHHHHCCC-CeEEEEE
Confidence            9875322   344555565 6666544

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.56  E-value=0.00021  Score=65.72  Aligned_cols=111  Identities=17%  Similarity=0.204  Sum_probs=79.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      -.+.+|+|+|.|.+|.++++.++..|+ +|++.+++.++.+.+.++|.. +++.     .++.    ++.. ..|+|+.+
T Consensus       155 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~-~~~~-----~~l~----~~l~-~aDvVi~~  222 (300)
T 2rir_A          155 IHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLV-PFHT-----DELK----EHVK-DIDICINT  222 (300)
T ss_dssp             STTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCE-EEEG-----GGHH----HHST-TCSEEEEC
T ss_pred             CCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCe-EEch-----hhHH----HHhh-CCCEEEEC
Confidence            368899999999999999999999999 999999998888777777764 3322     1232    2222 59999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEE
Q 018022          280 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM  327 (362)
Q Consensus       280 ~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~  327 (362)
                      ++....-...+..|+++ +.++.++..+..  .++  .....+++.+.
T Consensus       223 ~p~~~i~~~~~~~mk~g-~~lin~a~g~~~--~~~--~~a~~~G~~~i  265 (300)
T 2rir_A          223 IPSMILNQTVLSSMTPK-TLILDLASRPGG--TDF--KYAEKQGIKAL  265 (300)
T ss_dssp             CSSCCBCHHHHTTSCTT-CEEEECSSTTCS--BCH--HHHHHHTCEEE
T ss_pred             CChhhhCHHHHHhCCCC-CEEEEEeCCCCC--cCH--HHHHHCCCEEE
Confidence            99754224577889997 899999863222  223  33444566655

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=97.56  E-value=0.00031  Score=62.45  Aligned_cols=102  Identities=16%  Similarity=0.185  Sum_probs=74.8

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHhc----CCc---EEEcCCCCCCccHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRF----GVT---EFVNSKNCGDKSVSQI  264 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~~----g~~---~vv~~~~~~~~~~~~~  264 (362)
                      +....+++++++||-.|+|. |..+..+++..+ ..++++++.+++..+.+++.    |..   .++..      ++.+.
T Consensus        85 i~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~------d~~~~  157 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLK------DIYEG  157 (255)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECS------CGGGC
T ss_pred             HHHhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEEC------chhhc
Confidence            45677889999999999987 888888888853 34999999999988887653    542   23322      22111


Q ss_pred             HHhhcCCCccEEEEcCCCH-HHHHHHHHHhccCCceEEEEcc
Q 018022          265 IIDMTDGGADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       265 i~~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                         +..+.+|+|+...+.+ ..++.+.+.|+++ |+++++..
T Consensus       158 ---~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  195 (255)
T 3mb5_A          158 ---IEEENVDHVILDLPQPERVVEHAAKALKPG-GFFVAYTP  195 (255)
T ss_dssp             ---CCCCSEEEEEECSSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred             ---cCCCCcCEEEECCCCHHHHHHHHHHHcCCC-CEEEEEEC
Confidence               2223799999987766 3688999999998 99998753

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.53  E-value=0.00032  Score=62.36  Aligned_cols=103  Identities=15%  Similarity=0.155  Sum_probs=69.1

Q ss_pred             CCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE-EEcCCCCCCccHHHHHHhhcCCCccEE
Q 018022          199 VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTDGGADYC  276 (362)
Q Consensus       199 ~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~~g~d~v  276 (362)
                      +-.|+++||+|+ +++|++.++.+...|+ +|++++++.++++....-.+.. ..|-.+   ++-.+.+.+.. +++|++
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~---~~~v~~~~~~~-g~iDiL   82 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAPRHPRIRREELDITD---SQRLQRLFEAL-PRLDVL   82 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSCCCTTEEEEECCTTC---HHHHHHHHHHC-SCCSEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhhhcCCeEEEEecCCC---HHHHHHHHHhc-CCCCEE
Confidence            346999999987 9999999999999999 9999999887765433222211 222222   33333333333 379999


Q ss_pred             EEcCCCH-----------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          277 FECVGLA-----------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       277 id~~g~~-----------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      +++.|..                       ...+.++..|+.++|+|+.++..
T Consensus        83 VNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~  135 (242)
T 4b79_A           83 VNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASM  135 (242)
T ss_dssp             EECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCG
T ss_pred             EECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeec
Confidence            9999852                       12345566665434999999754

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.52  E-value=0.00014  Score=70.72  Aligned_cols=98  Identities=17%  Similarity=0.240  Sum_probs=75.3

Q ss_pred             HHHhcCC-CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC
Q 018022          193 AWRTANV-EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG  271 (362)
Q Consensus       193 l~~~~~~-~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~  271 (362)
                      +.+..+. -.|++++|+|+|++|++.++.++..|+ +|+++++++.+...+...+++ +.+.+     +       .. .
T Consensus       255 i~r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~~g~d-v~~le-----e-------~~-~  319 (488)
T 3ond_A          255 LMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQATMEGLQ-VLTLE-----D-------VV-S  319 (488)
T ss_dssp             HHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECCGG-----G-------TT-T
T ss_pred             HHHHcCCcccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhCCc-cCCHH-----H-------HH-H
Confidence            3344443 478999999999999999999999999 999999999888887777753 22111     1       11 1


Q ss_pred             CccEEEEcCCCHHHHH-HHHHHhccCCceEEEEccC
Q 018022          272 GADYCFECVGLASLVQ-EAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       272 g~d~vid~~g~~~~~~-~~~~~l~~~~G~iv~~G~~  306 (362)
                      .+|+++++.|....+. ..+..++++ +.++.+|..
T Consensus       320 ~aDvVi~atG~~~vl~~e~l~~mk~g-aiVvNaG~~  354 (488)
T 3ond_A          320 EADIFVTTTGNKDIIMLDHMKKMKNN-AIVCNIGHF  354 (488)
T ss_dssp             TCSEEEECSSCSCSBCHHHHTTSCTT-EEEEESSST
T ss_pred             hcCEEEeCCCChhhhhHHHHHhcCCC-eEEEEcCCC
Confidence            5899999999776554 488899997 899999863

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.43  E-value=0.00086  Score=59.88  Aligned_cols=104  Identities=17%  Similarity=0.194  Sum_probs=68.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d~  275 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|+++++++++++.+. +++... .+..+-.+.+++.+.+.+...  +++|+
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL   85 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            5789999998 9999999999999999 9999999988876654 344332 222211011223222222211  37999


Q ss_pred             EEEcCCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          276 CFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       276 vid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      ++.+.|..                         ...+.+...++++ |+|++++..
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~  140 (255)
T 4eso_A           86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREG-GSIVFTSSV  140 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECCG
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CEEEEECCh
Confidence            99998842                         1234455566776 999999764

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.42  E-value=0.0013  Score=52.78  Aligned_cols=77  Identities=13%  Similarity=0.191  Sum_probs=58.3

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      ..+++|+|+|.+|...++.+...|+ +|+++++++++.+.+++.+...+. .+.   . -.+.+.+..-.++|++|.+++
T Consensus         6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~~~~~~~-gd~---~-~~~~l~~~~~~~~d~vi~~~~   79 (141)
T 3llv_A            6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEGFDAVI-ADP---T-DESFYRSLDLEGVSAVLITGS   79 (141)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEE-CCT---T-CHHHHHHSCCTTCSEEEECCS
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCcEEE-CCC---C-CHHHHHhCCcccCCEEEEecC
Confidence            4679999999999999999999999 999999999999988887765333 221   1 123344432227999999999


Q ss_pred             CHH
Q 018022          282 LAS  284 (362)
Q Consensus       282 ~~~  284 (362)
                      ...
T Consensus        80 ~~~   82 (141)
T 3llv_A           80 DDE   82 (141)
T ss_dssp             CHH
T ss_pred             CHH
Confidence            764

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.41  E-value=0.0018  Score=56.68  Aligned_cols=100  Identities=12%  Similarity=0.064  Sum_probs=68.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      .+.+|||+|+ |.+|...++.+...|+ +|++++++.++.+.+.+.++.+++..+-      .+.+.+... ++|+||.+
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~Dl------~~~~~~~~~-~~D~vi~~   91 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVVANL------EEDFSHAFA-SIDAVVFA   91 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEECCT------TSCCGGGGT-TCSEEEEC
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEEccc------HHHHHHHHc-CCCEEEEC
Confidence            4678999998 9999999999999999 9999999999988887777623343222      122333333 69999999


Q ss_pred             CCCHH-------------HHHHHHHHhccC-CceEEEEccCCC
Q 018022          280 VGLAS-------------LVQEAYACCRKG-WGKTIVLGVDQP  308 (362)
Q Consensus       280 ~g~~~-------------~~~~~~~~l~~~-~G~iv~~G~~~~  308 (362)
                      .|...             ....+++.++.. .+++++++....
T Consensus        92 ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~  134 (236)
T 3e8x_A           92 AGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGT  134 (236)
T ss_dssp             CCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCC
Confidence            98531             122344444332 268999887543

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.38  E-value=0.0019  Score=57.83  Aligned_cols=104  Identities=17%  Similarity=0.262  Sum_probs=66.4

Q ss_pred             CCCEEEEECC-Ch--HHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCC--cEEEcCCCCCCccHHHHHHhhcC-
Q 018022          201 VGSTVVIFGL-GS--IGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV--TEFVNSKNCGDKSVSQIIIDMTD-  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~--~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~--~~vv~~~~~~~~~~~~~i~~~~~-  270 (362)
                      .+.++||+|+ |.  +|.+.++.+...|+ +|++++++++..+.+++    .+.  ..++.-+-.+.+++.+.+.++.. 
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ   84 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            4678999987 66  99999999999999 89999888765444433    332  22222211112334444443322 


Q ss_pred             -CCccEEEEcCCCHH-----------------------------HHHHHHHHhccCCceEEEEccC
Q 018022          271 -GGADYCFECVGLAS-----------------------------LVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       271 -~g~d~vid~~g~~~-----------------------------~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                       +.+|++|.+.|...                             ..+.++..++++ |+|++++..
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~  149 (266)
T 3oig_A           85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEG-GSIVTLTYL  149 (266)
T ss_dssp             HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTC-EEEEEEECG
T ss_pred             hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-ceEEEEecc
Confidence             26999999987421                             234455666776 999999754

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.37  E-value=0.0028  Score=56.72  Aligned_cols=105  Identities=16%  Similarity=0.236  Sum_probs=68.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCcEE-EcCCCCCCccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEF-VNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~~v-v~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      +|+++||+|+ +++|++.++.+...|+ +|+.+++++++++.+    ++.|.... +.-+-.+++++.+.+.+...  |+
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   84 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSR   84 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4789999988 9999999999999999 999999999887654    34554432 21111012333333333222  37


Q ss_pred             ccEEEEcCCCH--------------------------HHHHHHHHHhcc-CCceEEEEccC
Q 018022          273 ADYCFECVGLA--------------------------SLVQEAYACCRK-GWGKTIVLGVD  306 (362)
Q Consensus       273 ~d~vid~~g~~--------------------------~~~~~~~~~l~~-~~G~iv~~G~~  306 (362)
                      +|+++++.|..                          ...+.+++.|.+ ++|+|+.++..
T Consensus        85 iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~  145 (254)
T 4fn4_A           85 IDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASI  145 (254)
T ss_dssp             CCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             CCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEech
Confidence            99999998831                          124456666643 23899999754

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.36  E-value=0.0022  Score=57.47  Aligned_cols=106  Identities=21%  Similarity=0.243  Sum_probs=70.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCcEEEcCCCCC-CccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEFVNSKNCG-DKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~~vv~~~~~~-~~~~~~~i~~~~~--~g  272 (362)
                      .|+++||+|+ +++|++.++.+...|+ +|+.+++++++++.+    ++.|.....-.-+-. ++++.+.+.+...  |+
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   86 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIH   86 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            5789999987 9999999999999999 999999998876543    344544332221111 2333333333322  37


Q ss_pred             ccEEEEcCCCH-------------------------HHHHHHHHHhc--cCCceEEEEccCC
Q 018022          273 ADYCFECVGLA-------------------------SLVQEAYACCR--KGWGKTIVLGVDQ  307 (362)
Q Consensus       273 ~d~vid~~g~~-------------------------~~~~~~~~~l~--~~~G~iv~~G~~~  307 (362)
                      +|+++++.|..                         ...+.+++.|.  .++|+|+.++...
T Consensus        87 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~  148 (255)
T 4g81_D           87 VDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLT  148 (255)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehh
Confidence            99999999852                         12345666662  2238999997643

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.36  E-value=0.0026  Score=56.24  Aligned_cols=81  Identities=21%  Similarity=0.161  Sum_probs=54.2

Q ss_pred             CCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCcE-EEcCCCCCCccHHHHHHhhcCCCccE
Q 018022          199 VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTE-FVNSKNCGDKSVSQIIIDMTDGGADY  275 (362)
Q Consensus       199 ~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~~-vv~~~~~~~~~~~~~i~~~~~~g~d~  275 (362)
                      ..++.+|||+|+ |++|.+.++.+...|+ +|++++++.++++.+. .+.... ++..+- .+.+..+.+.+.. +++|+
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~-~~id~   87 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKDNYTIEVCNL-ANKEECSNLISKT-SNLDI   87 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCT-TSHHHHHHHHHTC-SCCSE
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhccCccEEEcCC-CCHHHHHHHHHhc-CCCCE
Confidence            457889999998 9999999999999999 9999999988877654 344322 222221 1122222222222 36999


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|.+.|.
T Consensus        88 li~~Ag~   94 (249)
T 3f9i_A           88 LVCNAGI   94 (249)
T ss_dssp             EEECCC-
T ss_pred             EEECCCC
Confidence            9999984

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.33  E-value=0.0021  Score=57.20  Aligned_cols=80  Identities=20%  Similarity=0.258  Sum_probs=53.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcC--CCccEEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTD--GGADYCF  277 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~--~g~d~vi  277 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+..++++. .++.-+-.+.+++.+.+.+...  +++|++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv   82 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV   82 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4678999998 9999999999999999 99999998877444445542 3332221011233333333221  3699999


Q ss_pred             EcCCC
Q 018022          278 ECVGL  282 (362)
Q Consensus       278 d~~g~  282 (362)
                      .+.|.
T Consensus        83 ~~Ag~   87 (256)
T 2d1y_A           83 NNAAI   87 (256)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99884

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.31  E-value=0.0019  Score=57.48  Aligned_cols=105  Identities=16%  Similarity=0.187  Sum_probs=66.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d~  275 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+. +++... .+.-+-.+.+++.+.+.+...  +.+|+
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999998 9999999999999999 8999999988776543 344322 222221011233333333221  26899


Q ss_pred             EEEcCCCH----------H---------------HHHHHHHHhccCCceEEEEccC
Q 018022          276 CFECVGLA----------S---------------LVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       276 vid~~g~~----------~---------------~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      +|.+.|..          .               ..+.++..|+..+|+|+.++..
T Consensus        84 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~  139 (253)
T 1hxh_A           84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASV  139 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCG
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcch
Confidence            99998842          1               2334555565422899998754

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.29  E-value=0.0024  Score=57.11  Aligned_cols=79  Identities=18%  Similarity=0.240  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-C--hHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCC--cEEE--cCCCCCCccHHHHHHhhc
Q 018022          201 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGV--TEFV--NSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       201 ~g~~vlI~Ga-g--~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~--~~vv--~~~~~~~~~~~~~i~~~~  269 (362)
                      .|+++||+|+ |  ++|++.++.+...|+ +|+.++++++.++.+.    +++.  ...+  |-.+  ++++.+.+.+..
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~   81 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQS--DEEVINGFEQIG   81 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTC--HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCC--HHHHHHHHHHHH
Confidence            5789999997 5  799999999999999 9999999987765543    3342  2222  2222  233333333222


Q ss_pred             C--CCccEEEEcCCC
Q 018022          270 D--GGADYCFECVGL  282 (362)
Q Consensus       270 ~--~g~d~vid~~g~  282 (362)
                      .  +.+|+++++.|.
T Consensus        82 ~~~G~iD~lvnnAg~   96 (256)
T 4fs3_A           82 KDVGNIDGVYHSIAF   96 (256)
T ss_dssp             HHHCCCSEEEECCCC
T ss_pred             HHhCCCCEEEecccc
Confidence            1  379999998874

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.27  E-value=0.0029  Score=56.05  Aligned_cols=81  Identities=21%  Similarity=0.259  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEEcCCCCCCccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++++.+.    +.+.. ..+..+-.+.+++.+.+.+...  ++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   84 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG   84 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999998 9999999999999999 9999999888765543    22432 2222211011233333333221  36


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        85 id~lv~nAg~   94 (247)
T 2jah_A           85 LDILVNNAGI   94 (247)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.25  E-value=0.0012  Score=59.35  Aligned_cols=103  Identities=11%  Similarity=0.084  Sum_probs=67.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH---HhcCCc-EEE--cCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG---KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~---~~~g~~-~vv--~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      +|+++||+|+ +++|++.++.+...|+ +|+++++++++.+.+   .+.+.. ..+  |-.+  ++++.+.+.+...  |
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~v~~~~~~~G   82 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVELQD--DAQCRDAVAQTIATFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTC--HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence            5789999987 9999999999999999 999999887765443   333432 222  2222  2333333333222  3


Q ss_pred             CccEEEEcCCCH------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          272 GADYCFECVGLA------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       272 g~d~vid~~g~~------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      ++|+++++.|..                        ...+.++..|+.++|+|+.++..
T Consensus        83 ~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~  141 (258)
T 4gkb_A           83 RLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSK  141 (258)
T ss_dssp             CCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCT
T ss_pred             CCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeeh
Confidence            799999999852                        12345566665434999999753

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.25  E-value=0.0021  Score=58.61  Aligned_cols=105  Identities=17%  Similarity=0.214  Sum_probs=66.9

Q ss_pred             CCCCEEEEECC-Ch--HHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcEEEcCCCCCCccHHHHHHhhc--C
Q 018022          200 EVGSTVVIFGL-GS--IGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDMT--D  270 (362)
Q Consensus       200 ~~g~~vlI~Ga-g~--~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~vv~~~~~~~~~~~~~i~~~~--~  270 (362)
                      -.+.++||+|+ |.  +|.+.++.+...|+ +|++++++++..+.++    +.+...++.-+-.+.+++.+.+.+..  -
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW  107 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            35789999987 66  99999999999999 8999998865444333    33432333222101123333333322  1


Q ss_pred             CCccEEEEcCCCH-----------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          271 GGADYCFECVGLA-----------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       271 ~g~d~vid~~g~~-----------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      +++|++|.+.|..                             ...+.++..++++ |+|++++..
T Consensus       108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~Iv~isS~  171 (293)
T 3grk_A          108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADG-GSILTLTYY  171 (293)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTC-EEEEEEECG
T ss_pred             CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CEEEEEeeh
Confidence            3799999998842                             1234556667776 999999754

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.25  E-value=0.00096  Score=53.36  Aligned_cols=76  Identities=16%  Similarity=0.330  Sum_probs=55.5

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      +.+|+|+|+|.+|...++.+...|. +|+++++++++.+.+++.+... +..+.   .+ .+.+.+..-+++|++|.+++
T Consensus         6 ~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~~~~~-~~~d~---~~-~~~l~~~~~~~~d~vi~~~~   79 (144)
T 2hmt_A            6 NKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHA-VIANA---TE-ENELLSLGIRNFEYVIVAIG   79 (144)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTTCSEE-EECCT---TC-HHHHHTTTGGGCSEEEECCC
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCEE-EEeCC---CC-HHHHHhcCCCCCCEEEECCC
Confidence            4679999999999999999999998 8999999888887776666543 32222   12 23344331127999999999


Q ss_pred             CH
Q 018022          282 LA  283 (362)
Q Consensus       282 ~~  283 (362)
                      ..
T Consensus        80 ~~   81 (144)
T 2hmt_A           80 AN   81 (144)
T ss_dssp             SC
T ss_pred             Cc
Confidence            74

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=97.25  E-value=0.0035  Score=55.85  Aligned_cols=81  Identities=25%  Similarity=0.254  Sum_probs=54.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCc-EEEcCCCCCCccHHHHHHhhc--CCCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EFVNSKNCGDKSVSQIIIDMT--DGGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~-~vv~~~~~~~~~~~~~i~~~~--~~g~d~  275 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+. +++.. ..+.-+-.+.+++.+.+.+..  -+++|+
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   85 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI   85 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4689999998 9999999999999999 9999999988776543 45433 222221101123333333322  237999


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|.+.|.
T Consensus        86 lv~~Ag~   92 (259)
T 4e6p_A           86 LVNNAAL   92 (259)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999985

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.25  E-value=0.002  Score=58.78  Aligned_cols=104  Identities=19%  Similarity=0.266  Sum_probs=66.9

Q ss_pred             CCCEEEEECC-C--hHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcEEEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g--~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ |  ++|.+.++.+...|+ +|++++++++..+.++    +.+....+.-+-.+.+++.+.+.+...  +
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG  107 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5789999998 5  899999999999999 8999999876544433    334333332222112333333333321  3


Q ss_pred             CccEEEEcCCCHH-----------------------------HHHHHHHHhccCCceEEEEccC
Q 018022          272 GADYCFECVGLAS-----------------------------LVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       272 g~d~vid~~g~~~-----------------------------~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      ++|++|++.|...                             ..+.+...++++ |+|++++..
T Consensus       108 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-g~IV~isS~  170 (296)
T 3k31_A          108 SLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNG-GSILTLSYY  170 (296)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTC-EEEEEEECG
T ss_pred             CCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CEEEEEEeh
Confidence            7999999998421                             223445566676 999998754

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.24  E-value=0.0037  Score=55.82  Aligned_cols=81  Identities=20%  Similarity=0.223  Sum_probs=53.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EEcCCCCCCccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++++.+.    +.+... ++.-+-.+.+++.+.+.+...  +.
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  106 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR  106 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            5789999998 9999999999999999 8999999988765543    234322 222221011233333333221  26


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus       107 id~lv~~Ag~  116 (262)
T 3rkr_A          107 CDVLVNNAGV  116 (262)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999986

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.23  E-value=0.0057  Score=54.49  Aligned_cols=81  Identities=23%  Similarity=0.256  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hc-----C-CcEEEcCCCCCCccHHHHHHhhcCC-
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF-----G-VTEFVNSKNCGDKSVSQIIIDMTDG-  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~-----g-~~~vv~~~~~~~~~~~~~i~~~~~~-  271 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+. ++     + -..++.-+-.+.+.+.+.+.+.... 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG   84 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4678999998 9999999999999999 9999999887765432 22     2 1122222210123333344433322 


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus        85 gid~lv~~Ag~   95 (260)
T 2z1n_A           85 GADILVYSTGG   95 (260)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            49999999984

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.23  E-value=0.0019  Score=58.25  Aligned_cols=81  Identities=20%  Similarity=0.302  Sum_probs=52.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCC-c--EEEcCCCCCCccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGV-T--EFVNSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~-~--~vv~~~~~~~~~~~~~i~~~~~--  270 (362)
                      .+.++||+|+ |.+|.+.++.+...|+ +|++++++.++.+.+.    ..+. .  .++.-+-.+.+++.+.+.++..  
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            4678999998 9999999999999999 9999999887765442    2332 1  2222111011233333333221  


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +++|++|.+.|.
T Consensus       110 g~iD~vi~~Ag~  121 (279)
T 1xg5_A          110 SGVDICINNAGL  121 (279)
T ss_dssp             CCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            269999999883

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.23  E-value=0.0019  Score=58.21  Aligned_cols=82  Identities=17%  Similarity=0.178  Sum_probs=53.6

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCc-EEEcCCCCCCccHHHHHHhhcC--CCcc
Q 018022          200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EFVNSKNCGDKSVSQIIIDMTD--GGAD  274 (362)
Q Consensus       200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~d  274 (362)
                      -.+.++||+|+ |++|.+.++.+...|+ +|++++++.++++.+. +++.. .++.-+-.+.+++.+.+.+...  +++|
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  104 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVD  104 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            35688999998 9999999999999999 9999999988876543 44422 2232221011233333333221  3799


Q ss_pred             EEEEcCCC
Q 018022          275 YCFECVGL  282 (362)
Q Consensus       275 ~vid~~g~  282 (362)
                      ++|.+.|.
T Consensus       105 ~lVnnAg~  112 (272)
T 4dyv_A          105 VLFNNAGT  112 (272)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999885

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.22  E-value=0.0039  Score=54.40  Aligned_cols=80  Identities=15%  Similarity=0.106  Sum_probs=52.7

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCcEEEcCCCCCCccHHHHHHhhcC--CCccEEE
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTD--GGADYCF  277 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~~vv~~~~~~~~~~~~~i~~~~~--~g~d~vi  277 (362)
                      +.++||+|+ |.+|.+.++.+...|+ +|++++++.++++.+. +++...++..+-.+.+++.+.+.+...  +++|++|
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            568999998 9999999999999999 9999999888776544 343223332221012233333333211  2699999


Q ss_pred             EcCCC
Q 018022          278 ECVGL  282 (362)
Q Consensus       278 d~~g~  282 (362)
                      .+.|.
T Consensus        84 ~~Ag~   88 (234)
T 2ehd_A           84 NNAGV   88 (234)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99883

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.20  E-value=0.004  Score=56.28  Aligned_cols=105  Identities=19%  Similarity=0.149  Sum_probs=67.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d~  275 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+. +++... .+.-+-.+.+++.+.+.+...  +++|+
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV  104 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4689999998 9999999999999999 9999999988776544 455432 222111011233333333221  26999


Q ss_pred             EEEcCCCH----------H---------------HHHHHHHHhccC-CceEEEEccC
Q 018022          276 CFECVGLA----------S---------------LVQEAYACCRKG-WGKTIVLGVD  306 (362)
Q Consensus       276 vid~~g~~----------~---------------~~~~~~~~l~~~-~G~iv~~G~~  306 (362)
                      +|.+.|..          .               ..+.++..|+.. +|+|++++..
T Consensus       105 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~  161 (277)
T 4dqx_A          105 LVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSY  161 (277)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCG
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECch
Confidence            99999841          1               123455555542 2799998754

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.19  E-value=0.0031  Score=55.45  Aligned_cols=104  Identities=12%  Similarity=0.140  Sum_probs=65.9

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCc-EEEcCCCCCCccHHHHHHhhcC--CCccEE
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EFVNSKNCGDKSVSQIIIDMTD--GGADYC  276 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~d~v  276 (362)
                      +.++||+|+ |++|.+.++.+...|+ +|++++++.++++.+.+ ++.. ..+.-+-.+.+++.+.+.+...  +++|++
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   81 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELV   81 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEE
Confidence            568999998 9999999999999999 99999999888766543 3322 1222111011233333333221  379999


Q ss_pred             EEcCCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          277 FECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       277 id~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      |.+.|..                         ...+.++..|+...|+|++++..
T Consensus        82 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~  136 (235)
T 3l6e_A           82 LHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSS  136 (235)
T ss_dssp             EEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCE
T ss_pred             EECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCH
Confidence            9998852                         11244555565433788888753

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.19  E-value=0.004  Score=55.70  Aligned_cols=79  Identities=27%  Similarity=0.316  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hc-----CCc-EEE--cCCCCCCccHHHHHHhhcC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF-----GVT-EFV--NSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~-----g~~-~vv--~~~~~~~~~~~~~i~~~~~  270 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+. ++     +.. ..+  |-.+  .+++.+.+.+...
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~   88 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD--EAQVEAYVTATTE   88 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCC--HHHHHHHHHHHHH
Confidence            4678999998 9999999999999999 9999999887765432 21     332 222  2222  1233333333221


Q ss_pred             --CCccEEEEcCCC
Q 018022          271 --GGADYCFECVGL  282 (362)
Q Consensus       271 --~g~d~vid~~g~  282 (362)
                        +++|++|.+.|.
T Consensus        89 ~~g~id~lv~nAg~  102 (267)
T 1iy8_A           89 RFGRIDGFFNNAGI  102 (267)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             HcCCCCEEEECCCc
Confidence              269999999873

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=97.18  E-value=0.0038  Score=55.50  Aligned_cols=81  Identities=22%  Similarity=0.322  Sum_probs=53.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d~  275 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +++... .+..+-.+.+++.+.+.+...  +++|+
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999998 9999999999999999 9999999988776543 344322 222111011233333333321  26999


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|.+.|.
T Consensus        83 lv~nAg~   89 (254)
T 1hdc_A           83 LVNNAGI   89 (254)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999884

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=97.17  E-value=0.0056  Score=56.96  Aligned_cols=132  Identities=15%  Similarity=0.110  Sum_probs=85.9

Q ss_pred             CEEEEECCChHHHHHHHHHH-H-cCCCEEEEEcCCchHHHH-HHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          203 STVVIFGLGSIGLAVAEGAR-L-CGATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~-~-~g~~~vi~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      -+|.|+|+|.+|...++.++ . .+++.+.+.++++++.+. ++++|...+++       ++.+.+.   ...+|+|+.|
T Consensus         9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~-------~~~~~l~---~~~~D~V~i~   78 (346)
T 3cea_A            9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT-------NYKDMID---TENIDAIFIV   78 (346)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES-------CHHHHHT---TSCCSEEEEC
T ss_pred             ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC-------CHHHHhc---CCCCCEEEEe
Confidence            47899999999998888776 4 466345567888888755 45678755442       2333221   1269999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHH---H---H-hc-CcEEEEeeccCCCccccHHHHHHHHHcCC
Q 018022          280 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFE---V---L-HS-GKILMGSLFGGLKAKSDIPILLKRYMDKW  351 (362)
Q Consensus       280 ~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~---~---~-~~-~~~i~g~~~~~~~~~~~l~~~l~~~~~g~  351 (362)
                      ++.....+.+..+++.  |+.+++..     ++..+...   +   . .+ ++.+.-.+...+  ...+..+.+++++|+
T Consensus        79 tp~~~h~~~~~~al~~--G~~v~~eK-----p~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~--~p~~~~~~~~i~~g~  149 (346)
T 3cea_A           79 APTPFHPEMTIYAMNA--GLNVFCEK-----PLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRY--DDSYRYAKKIVDNGD  149 (346)
T ss_dssp             SCGGGHHHHHHHHHHT--TCEEEECS-----CCCSCHHHHHHHHHHHHTCTTSCEECCCGGGT--CHHHHHHHHHHHTTT
T ss_pred             CChHhHHHHHHHHHHC--CCEEEEcC-----CCCCCHHHHHHHHHHHHhCCCCeEEEeccccc--CHHHHHHHHHHHcCC
Confidence            9988778888888887  56666643     22233222   2   2 34 555543333222  245888999999987


Q ss_pred             cc
Q 018022          352 SY  353 (362)
Q Consensus       352 l~  353 (362)
                      |-
T Consensus       150 iG  151 (346)
T 3cea_A          150 IG  151 (346)
T ss_dssp             TC
T ss_pred             CC
Confidence            74

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.16  E-value=0.0032  Score=56.59  Aligned_cols=79  Identities=23%  Similarity=0.291  Sum_probs=53.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EE--cCCCCCCccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FV--NSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv--~~~~~~~~~~~~~i~~~~~--  270 (362)
                      .+.++||+|+ |++|++.++.+...|+ +|++++++.++++.+.    +.+... .+  |-.+  .+++.+.+.+...  
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~   79 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTD--RHSVAAFAQAAVDTW   79 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            3678999998 9999999999999999 8999999988766543    234332 22  2222  1233333333221  


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +++|++|.+.|.
T Consensus        80 g~iD~lVnnAG~   91 (264)
T 3tfo_A           80 GRIDVLVNNAGV   91 (264)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            369999999884

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.16  E-value=0.0022  Score=57.01  Aligned_cols=74  Identities=14%  Similarity=0.041  Sum_probs=50.9

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh---cCCc-EEEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVT-EFVNSKNCGDKSVSQIIIDMTD--GGADY  275 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~---~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~d~  275 (362)
                      .++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+   .+.. ..++  .   +++.+.+.+...  +++|+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~d--~---~~v~~~~~~~~~~~g~iD~   75 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPMS--E---QEPAELIEAVTSAYGQVDV   75 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEECC--C---CSHHHHHHHHHHHHSCCCE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCcEEEEC--H---HHHHHHHHHHHHHhCCCCE
Confidence            36899998 9999999999999999 99999998877655432   2432 2222  2   334443333321  37999


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|.+.|.
T Consensus        76 lv~nAg~   82 (254)
T 1zmt_A           76 LVSNDIF   82 (254)
T ss_dssp             EEEECCC
T ss_pred             EEECCCc
Confidence            9999874

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.16  E-value=0.0026  Score=56.93  Aligned_cols=80  Identities=20%  Similarity=0.208  Sum_probs=54.1

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EE--cCCCCCCccHHHHHHhhc--
Q 018022          200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FV--NSKNCGDKSVSQIIIDMT--  269 (362)
Q Consensus       200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv--~~~~~~~~~~~~~i~~~~--  269 (362)
                      -.+.++||+|+ +++|.+.++.+...|+ +|++++++.++++.+.    +.+... .+  |-.+  .+++.+.+.+..  
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~   85 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITD--DAQVAHLVDETMKA   85 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            35789999998 9999999999999999 8999999988766543    234332 22  2222  123333333322  


Q ss_pred             CCCccEEEEcCCC
Q 018022          270 DGGADYCFECVGL  282 (362)
Q Consensus       270 ~~g~d~vid~~g~  282 (362)
                      -+++|++|.+.|.
T Consensus        86 ~g~id~lv~nAg~   98 (264)
T 3ucx_A           86 YGRVDVVINNAFR   98 (264)
T ss_dssp             TSCCSEEEECCCS
T ss_pred             cCCCcEEEECCCC
Confidence            1379999999865

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.16  E-value=0.0019  Score=58.59  Aligned_cols=81  Identities=12%  Similarity=0.160  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c----CCc-EEEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GVT-EFVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~----g~~-~vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .|.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+ +    +.. ..+.-+-.+.+++.+.+.+...  +
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  110 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA  110 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5789999998 9999999999999999 99999999887655432 2    212 2332221012333333333221  3


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus       111 ~iD~lvnnAG~  121 (281)
T 4dry_A          111 RLDLLVNNAGS  121 (281)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=97.15  E-value=0.0026  Score=56.65  Aligned_cols=102  Identities=20%  Similarity=0.184  Sum_probs=66.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCch--HHHHHHhcCCcEEEcCCCCCCccHHHHHHhhc-CCCccEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT-DGGADYC  276 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~--~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~-~~g~d~v  276 (362)
                      .|.++||+|+ +++|++.++.+...|+ +|++++++.+  ..+.+++.|.......-+..++.   .+++.. .+++|++
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~---~v~~~~~~g~iDiL   83 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAKDGGNASALLIDFADPL---AAKDSFTDAGFDIL   83 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTT---TTTTSSTTTCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHH---HHHHHHHhCCCCEE
Confidence            4788999987 9999999999999999 9999988753  45566667654322111100111   122222 2489999


Q ss_pred             EEcCCCH-------------------------HHHHHHHHHhcc-C-CceEEEEccC
Q 018022          277 FECVGLA-------------------------SLVQEAYACCRK-G-WGKTIVLGVD  306 (362)
Q Consensus       277 id~~g~~-------------------------~~~~~~~~~l~~-~-~G~iv~~G~~  306 (362)
                      +++.|..                         ...+.+++.|.. + +|+|+.++..
T Consensus        84 VNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~  140 (247)
T 4hp8_A           84 VNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASL  140 (247)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG
T ss_pred             EECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEech
Confidence            9999852                         123445666532 1 3899999764

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.15  E-value=0.0039  Score=55.79  Aligned_cols=104  Identities=22%  Similarity=0.213  Sum_probs=64.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hc-----CCc-EEEcCCCCCCccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF-----GVT-EFVNSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~-----g~~-~vv~~~~~~~~~~~~~i~~~~~--  270 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+. ++     +.. ..+.-+-.+.+++.+.+.+...  
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            4678999998 9999999999999999 9999999887765432 22     111 2222211011233333333221  


Q ss_pred             CCccEEEEcCCCH--H---------------HHHHHHHHhcc-----CCceEEEEccC
Q 018022          271 GGADYCFECVGLA--S---------------LVQEAYACCRK-----GWGKTIVLGVD  306 (362)
Q Consensus       271 ~g~d~vid~~g~~--~---------------~~~~~~~~l~~-----~~G~iv~~G~~  306 (362)
                      +++|++|.+.|..  .               ..+.++..++.     . |+|+.++..
T Consensus        85 g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~-g~iv~isS~  141 (267)
T 2gdz_A           85 GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEG-GIIINMSSL  141 (267)
T ss_dssp             SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC-EEEEEECCG
T ss_pred             CCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCC-CEEEEeCCc
Confidence            2689999999842  0               22344555543     4 899998753

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.15  E-value=0.0042  Score=56.83  Aligned_cols=81  Identities=26%  Similarity=0.270  Sum_probs=54.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EEcCCCCCCccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++++.+.    +.+... ++.-+-.+.+++.+.+.+...  ++
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG  108 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            5789999998 9999999999999999 9999999988876543    234322 222211011233333333221  27


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus       109 id~lvnnAg~  118 (301)
T 3tjr_A          109 VDVVFSNAGI  118 (301)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999984

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.15  E-value=0.0047  Score=54.85  Aligned_cols=81  Identities=16%  Similarity=0.172  Sum_probs=53.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----c--C--CcEEEcCCCCCCccHHHHHHhhcC-
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----F--G--VTEFVNSKNCGDKSVSQIIIDMTD-  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~--g--~~~vv~~~~~~~~~~~~~i~~~~~-  270 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++.++.+.+.+    .  +  ...++.-+-.+.+++.+.+.+... 
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            4678999998 9999999999989999 99999999887665432    1  2  122332221011233333333221 


Q ss_pred             -CCccEEEEcCCC
Q 018022          271 -GGADYCFECVGL  282 (362)
Q Consensus       271 -~g~d~vid~~g~  282 (362)
                       +++|++|.+.|.
T Consensus        85 ~g~iD~lvnnAg~   97 (250)
T 3nyw_A           85 YGAVDILVNAAAM   97 (250)
T ss_dssp             HCCEEEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence             379999999985

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=97.15  E-value=0.0051  Score=54.02  Aligned_cols=76  Identities=16%  Similarity=0.180  Sum_probs=51.3

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcC--CCccEEEE
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTD--GGADYCFE  278 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~--~g~d~vid  278 (362)
                      +.++||+|+ |++|.+.++.+...|+ +|++++++.++  ..++++. ..+..+-.+ +++.+.+.+...  +++|++|.
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~~~-~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~   76 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSLGA-VPLPTDLEK-DDPKGLVKRALEALGGLHVLVH   76 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHHTC-EEEECCTTT-SCHHHHHHHHHHHHTSCCEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhhCc-EEEecCCch-HHHHHHHHHHHHHcCCCCEEEE
Confidence            468999998 9999999999999999 99999998876  3344453 222222111 344333333221  26999999


Q ss_pred             cCCC
Q 018022          279 CVGL  282 (362)
Q Consensus       279 ~~g~  282 (362)
                      +.|.
T Consensus        77 ~Ag~   80 (239)
T 2ekp_A           77 AAAV   80 (239)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9884

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=97.13  E-value=0.0034  Score=56.81  Aligned_cols=81  Identities=19%  Similarity=0.157  Sum_probs=54.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcE-EEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d~  275 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++.++++.+.+ .+... .+..+-.+.+++.+.+.+...  +++|+
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   82 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT   82 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4678999998 9999999999999999 99999999888766543 44332 222211011233333333221  37999


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|.+.|.
T Consensus        83 lvnnAg~   89 (281)
T 3zv4_A           83 LIPNAGI   89 (281)
T ss_dssp             EECCCCC
T ss_pred             EEECCCc
Confidence            9999884

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=97.13  E-value=0.0061  Score=54.35  Aligned_cols=79  Identities=30%  Similarity=0.421  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hc----CCc-EEE--cCCCCCCccHHHHHHhhcC-
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF----GVT-EFV--NSKNCGDKSVSQIIIDMTD-  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~----g~~-~vv--~~~~~~~~~~~~~i~~~~~-  270 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+. ++    +.. .++  |-.+  .+++.+.+.+... 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVAT--PEGVDAVVESVRSS   82 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4678999998 9999999999999999 9999999887765432 22    432 222  2222  1233333333221 


Q ss_pred             -CCccEEEEcCCC
Q 018022          271 -GGADYCFECVGL  282 (362)
Q Consensus       271 -~g~d~vid~~g~  282 (362)
                       +++|++|.+.|.
T Consensus        83 ~g~id~lv~~Ag~   95 (263)
T 3ai3_A           83 FGGADILVNNAGT   95 (263)
T ss_dssp             HSSCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence             269999999984

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.13  E-value=0.0038  Score=56.42  Aligned_cols=81  Identities=19%  Similarity=0.332  Sum_probs=54.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCc-EEEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EFVNSKNCGDKSVSQIIIDMTD--GGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~d~  275 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+. +++.. ..+.-+-.+.+++.+.+.+...  +++|+
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK  106 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999988 9999999999999999 9999999988776643 45432 2232211011233333333221  27999


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|.+.|.
T Consensus       107 lvnnAg~  113 (277)
T 3gvc_A          107 LVANAGV  113 (277)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999985

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.13  E-value=0.0037  Score=56.10  Aligned_cols=81  Identities=21%  Similarity=0.233  Sum_probs=54.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d~  275 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++++.+ ++++... ++.-+-.+.+++.+.+.+...  +++|+
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI  104 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            5689999998 9999999999999999 999999998887664 4455433 222211011233333332221  37999


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|.+.|.
T Consensus       105 lvnnAg~  111 (266)
T 3grp_A          105 LVNNAGI  111 (266)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999985

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.11  E-value=0.0087  Score=52.24  Aligned_cols=80  Identities=21%  Similarity=0.197  Sum_probs=51.5

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-----hcCCcE-EEcCCCCCCccHHHHHHhhcC--CC
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-----RFGVTE-FVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-----~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      +.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.     ..+... ++.-+-.+.+++.+.+.+...  ++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            578999998 9999999999999999 8999999988765542     234332 222211001222222221111  36


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        81 id~li~~Ag~   90 (235)
T 3l77_A           81 VDVVVANAGL   90 (235)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999885

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=97.10  E-value=0.0064  Score=54.17  Aligned_cols=79  Identities=22%  Similarity=0.218  Sum_probs=53.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCC-cEEE--cCCCCCCccHHHHHHhhcC--CCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGV-TEFV--NSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~-~~vv--~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+ +.. ...+  |-.+  .+++.+.+.+...  +++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d--~~~v~~~~~~~~~~~g~i   87 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLENGGFAVEVDVTK--RASVDAAMQKAIDALGGF   87 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCTTCCEEEECCTTC--HHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCC--HHHHHHHHHHHHHHcCCC
Confidence            4678999998 9999999999999999 99999999887765543 321 1222  2222  1233333333221  269


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        88 D~lv~~Ag~   96 (263)
T 3ak4_A           88 DLLCANAGV   96 (263)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999883

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.10  E-value=0.0055  Score=52.95  Aligned_cols=99  Identities=8%  Similarity=0.024  Sum_probs=64.7

Q ss_pred             CEEEEECC-ChHHHHHHHHHH-HcCCCEEEEEcCCch-HHHHHHhcCC-cEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          203 STVVIFGL-GSIGLAVAEGAR-LCGATRIIGVDVISE-KFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~-~~g~~~vi~~~~~~~-~~~~~~~~g~-~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      .+|||+|+ |.+|.+.++.+. ..|+ +|++++++++ +.+.+...+. ..++..+-   .+ .+.+.+... ++|++|.
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~---~d-~~~~~~~~~-~~d~vv~   79 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIIDHERVTVIEGSF---QN-PGXLEQAVT-NAEVVFV   79 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHTSTTEEEEECCT---TC-HHHHHHHHT-TCSEEEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccCCCceEEEECCC---CC-HHHHHHHHc-CCCEEEE
Confidence            46999998 999999988888 8999 9999999988 7665532222 22332221   11 233333333 6999999


Q ss_pred             cCCCHHH-HHHHHHHhccC-CceEEEEccCC
Q 018022          279 CVGLASL-VQEAYACCRKG-WGKTIVLGVDQ  307 (362)
Q Consensus       279 ~~g~~~~-~~~~~~~l~~~-~G~iv~~G~~~  307 (362)
                      +.|.... .+.+++.++.. .++|+.++...
T Consensus        80 ~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~  110 (221)
T 3r6d_A           80 GAMESGSDMASIVKALSRXNIRRVIGVSMAG  110 (221)
T ss_dssp             SCCCCHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred             cCCCCChhHHHHHHHHHhcCCCeEEEEeece
Confidence            9997321 45566666553 15898887643

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.09  E-value=0.0035  Score=56.19  Aligned_cols=103  Identities=19%  Similarity=0.259  Sum_probs=66.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCc-EEE--cCCCCCCccHHHHHHhhcC--CCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EFV--NSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~-~vv--~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++++.+. +++.. ..+  |-.+  .+++.+.+.+...  +.+
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~i   81 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSD--PKAVEAVFAEALEEFGRL   81 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTS--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCC--HHHHHHHHHHHHHHcCCC
Confidence            4678999998 9999999999999999 9999999988876654 34322 222  2222  1233333333221  268


Q ss_pred             cEEEEcCCCH-------------------------HHHHHHHHHhccCCceEEEEccCC
Q 018022          274 DYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVDQ  307 (362)
Q Consensus       274 d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~~~  307 (362)
                      |++|++.|..                         ...+.+...++.. |+|++++...
T Consensus        82 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~~  139 (263)
T 2a4k_A           82 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG-GSLVLTGSVA  139 (263)
T ss_dssp             CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT-CEEEEECCCT
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CEEEEEecch
Confidence            9999998742                         1123344445345 8999998643

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.09  E-value=0.0064  Score=55.06  Aligned_cols=81  Identities=16%  Similarity=0.178  Sum_probs=53.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c---CCcE-EEcCCCCCCccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F---GVTE-FVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~---g~~~-vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++.++.+.+.+ +   +... .+.-+-.+.+++.+.+.+...  ++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH  105 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4688999998 9999999999999999 99999999887665432 2   3322 222221012233333333321  37


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus       106 iD~lVnnAg~  115 (283)
T 3v8b_A          106 LDIVVANAGI  115 (283)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.09  E-value=0.0056  Score=54.83  Aligned_cols=79  Identities=22%  Similarity=0.359  Sum_probs=53.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-----cCCcE-EE--cCCCCCCccHHHHHHhhcC-
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVTE-FV--NSKNCGDKSVSQIIIDMTD-  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~g~~~-vv--~~~~~~~~~~~~~i~~~~~-  270 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++.++++.+.+     .+... .+  |-.+  .+++.+.+.+... 
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~   95 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAE--PDAPAELARRAAEA   95 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTS--TTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHH
Confidence            4688999998 9999999999999999 89999999887655422     34322 22  2222  2333333333322 


Q ss_pred             -CCccEEEEcCCC
Q 018022          271 -GGADYCFECVGL  282 (362)
Q Consensus       271 -~g~d~vid~~g~  282 (362)
                       +++|++|.+.|.
T Consensus        96 ~g~id~lv~nAg~  108 (266)
T 4egf_A           96 FGGLDVLVNNAGI  108 (266)
T ss_dssp             HTSCSEEEEECCC
T ss_pred             cCCCCEEEECCCc
Confidence             279999999884

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.09  E-value=0.0042  Score=54.74  Aligned_cols=81  Identities=20%  Similarity=0.233  Sum_probs=52.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcC---CcEEEcCCCCCCccHHHHHHhhcC--CCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG---VTEFVNSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g---~~~vv~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      .+.++||+|+ |.+|.+.++.+...|+ +|++++++.++.+.+. ++.   ...++..+-.+.+.+.+.+.+...  +.+
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999998 9999999999999999 8999999887765543 332   122332221011233333333221  269


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        84 d~li~~Ag~   92 (251)
T 1zk4_A           84 STLVNNAGI   92 (251)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.08  E-value=0.0099  Score=52.09  Aligned_cols=77  Identities=17%  Similarity=0.169  Sum_probs=52.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCcEEEcCCCCCCccHHHHHHhhcC--CCccEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTD--GGADYC  276 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~~vv~~~~~~~~~~~~~i~~~~~--~g~d~v  276 (362)
                      ++.++||+|+ |.+|.+.++.+...|+ +|++++++.++.+.+. ++....++..+-   .+ .+.+.++..  +++|++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~---~~-~~~~~~~~~~~~~id~v   80 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDL---GD-WEATERALGSVGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCT---TC-HHHHHHHHTTCCCCCEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCCEEEEeC---CC-HHHHHHHHHHcCCCCEE
Confidence            4678999998 9999999999999999 8999999888776543 332223332221   11 122333322  269999


Q ss_pred             EEcCCC
Q 018022          277 FECVGL  282 (362)
Q Consensus       277 id~~g~  282 (362)
                      |++.|.
T Consensus        81 i~~Ag~   86 (244)
T 3d3w_A           81 VNNAAV   86 (244)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999884

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.08  E-value=0.004  Score=55.46  Aligned_cols=81  Identities=21%  Similarity=0.292  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchH-HHHHH-hc----CCcE-EEcCCCCCCccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FEIGK-RF----GVTE-FVNSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~-~~~~~-~~----g~~~-vv~~~~~~~~~~~~~i~~~~~--  270 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++ .+.+. ++    +... .+.-+-.+.+++.+.+.+...  
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            3678999998 9999999999999999 89999998876 54432 22    4332 222111011233333333221  


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +++|++|.+.|.
T Consensus        82 g~iD~lv~~Ag~   93 (260)
T 1x1t_A           82 GRIDILVNNAGI   93 (260)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            369999999884

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.07  E-value=0.0057  Score=54.33  Aligned_cols=80  Identities=18%  Similarity=0.108  Sum_probs=51.8

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEEcCCCCCCccHHHHHHhhc--CCCc
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFVNSKNCGDKSVSQIIIDMT--DGGA  273 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv~~~~~~~~~~~~~i~~~~--~~g~  273 (362)
                      +.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.    +.+.. .++.-+-.+.+++.+.+.+..  -+++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   80 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            468999998 9999999999999999 9999999887765432    22432 222211101123333333321  1379


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        81 d~lv~nAg~   89 (256)
T 1geg_A           81 DVIVNNAGV   89 (256)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.07  E-value=0.0062  Score=54.04  Aligned_cols=81  Identities=19%  Similarity=0.239  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c----C-CcEEE--cCCCCCCccHHHHHHhhc--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----G-VTEFV--NSKNCGDKSVSQIIIDMT--  269 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~----g-~~~vv--~~~~~~~~~~~~~i~~~~--  269 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++.++++.+.+ +    + ...++  |-...+.+++.+.+.+..  
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            5789999998 9999999999999999 99999999887665432 1    2 11222  221011123333333322  


Q ss_pred             CCCccEEEEcCCC
Q 018022          270 DGGADYCFECVGL  282 (362)
Q Consensus       270 ~~g~d~vid~~g~  282 (362)
                      .+++|++|.+.|.
T Consensus        90 ~g~id~lv~nAg~  102 (252)
T 3f1l_A           90 YPRLDGVLHNAGL  102 (252)
T ss_dssp             CSCCSEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence            2379999999884

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=97.07  E-value=0.006  Score=54.78  Aligned_cols=79  Identities=23%  Similarity=0.239  Sum_probs=53.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCc-EEE--cCCCCCCccHHHHHHhhcC--CCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~-~vv--~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|+++++++++++.+ ++++.. ..+  |-.+  .+++.+.+.+...  +++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   86 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASVGRGAVHHVVDLTN--EVSVRALIDFTIDTFGRL   86 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHHCTTCEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCCeEEEECCCCC--HHHHHHHHHHHHHHcCCC
Confidence            4689999998 9999999999999999 999999998877654 345432 222  2222  1233333333221  269


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        87 d~lv~nAg~   95 (271)
T 3tzq_B           87 DIVDNNAAH   95 (271)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.06  E-value=0.0066  Score=52.15  Aligned_cols=101  Identities=18%  Similarity=0.213  Sum_probs=72.9

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc---EEEcCCCCCCccHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQII  265 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~~~i  265 (362)
                      +.....+.++++||-+|+|. |..++.+++. +. +|++++.+++.++.+++    +|..   .++..+.   .+   .+
T Consensus        47 ~l~~l~~~~~~~vLDlGcG~-G~~~~~la~~-~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~---~~---~~  117 (204)
T 3njr_A           47 TLAALAPRRGELLWDIGGGS-GSVSVEWCLA-GG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTA---PA---AL  117 (204)
T ss_dssp             HHHHHCCCTTCEEEEETCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCT---TG---GG
T ss_pred             HHHhcCCCCCCEEEEecCCC-CHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCch---hh---hc
Confidence            34567789999999999986 8888888888 77 99999999998887764    3543   2343322   11   11


Q ss_pred             HhhcCCCccEEEEcCCCHH-HHHHHHHHhccCCceEEEEcc
Q 018022          266 IDMTDGGADYCFECVGLAS-LVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       266 ~~~~~~g~d~vid~~g~~~-~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ..  .+.+|+|+...+... .++.+.+.|+++ |++++...
T Consensus       118 ~~--~~~~D~v~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  155 (204)
T 3njr_A          118 AD--LPLPEAVFIGGGGSQALYDRLWEWLAPG-TRIVANAV  155 (204)
T ss_dssp             TT--SCCCSEEEECSCCCHHHHHHHHHHSCTT-CEEEEEEC
T ss_pred             cc--CCCCCEEEECCcccHHHHHHHHHhcCCC-cEEEEEec
Confidence            11  126999997755433 688999999998 99988765

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.06  E-value=0.0047  Score=55.01  Aligned_cols=81  Identities=21%  Similarity=0.212  Sum_probs=53.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EEEcCCCCCCccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+    .+.. .++.-+-.+.+++.+.+.+...  ++
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR   83 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4678999998 9999999999999999 89999999888766543    2322 2222211011233333333321  37


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        84 id~lv~nAg~   93 (257)
T 3imf_A           84 IDILINNAAG   93 (257)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.06  E-value=0.0043  Score=55.18  Aligned_cols=81  Identities=16%  Similarity=0.097  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EEcCCCCCCccHHHHHHhhcC-CCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FVNSKNCGDKSVSQIIIDMTD-GGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv~~~~~~~~~~~~~i~~~~~-~g~  273 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++.++++.+.    +.+... ++.-+-.+.+++.+.+.+... +++
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~i   84 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPL   84 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCc
Confidence            4678999998 9999999999999999 9999999988765543    234322 222111011222222222211 479


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        85 d~lv~nAg~   93 (252)
T 3h7a_A           85 EVTIFNVGA   93 (252)
T ss_dssp             EEEEECCCC
T ss_pred             eEEEECCCc
Confidence            999999984

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.06  E-value=0.0066  Score=54.30  Aligned_cols=79  Identities=19%  Similarity=0.127  Sum_probs=52.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-----cCCc--EEE--cCCCCCCccHHHHHHhhcC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVT--EFV--NSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~g~~--~vv--~~~~~~~~~~~~~i~~~~~  270 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++.++.+.+.+     .+..  ..+  |-.+  .+++.+.+.+...
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~   83 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD--ALQVRAFAEACER   83 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCC--HHHHHHHHHHHHH
Confidence            4678999998 9999999999999999 89999999887655432     3322  222  2222  1223333333221


Q ss_pred             --CCccEEEEcCCC
Q 018022          271 --GGADYCFECVGL  282 (362)
Q Consensus       271 --~g~d~vid~~g~  282 (362)
                        +++|++|.+.|.
T Consensus        84 ~~g~id~lvnnAg~   97 (265)
T 3lf2_A           84 TLGCASILVNNAGQ   97 (265)
T ss_dssp             HHCSCSEEEECCCC
T ss_pred             HcCCCCEEEECCCC
Confidence              379999999985

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.06  E-value=0.0032  Score=58.14  Aligned_cols=81  Identities=12%  Similarity=0.145  Sum_probs=53.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCC--c-EEEcCCCCCCccHHHHHHhhc--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV--T-EFVNSKNCGDKSVSQIIIDMT--D  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~--~-~vv~~~~~~~~~~~~~i~~~~--~  270 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+    .+.  . .++..+-.+.+.+.+.+.+..  .
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF   85 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence            4679999998 9999999999999999 99999999887665432    232  1 222222101233333333332  1


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +++|++|.+.|.
T Consensus        86 g~id~lv~nAg~   97 (319)
T 3ioy_A           86 GPVSILCNNAGV   97 (319)
T ss_dssp             CCEEEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999999983

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.05  E-value=0.0041  Score=56.20  Aligned_cols=104  Identities=21%  Similarity=0.253  Sum_probs=65.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchH-HHH----HHhcCCcE-EEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FEI----GKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~-~~~----~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++ .+.    +++.+... ++.-+-.+.+++.+.+.+...  +
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  106 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG  106 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4678999998 9999999999999999 89998887654 222    33445432 222211011233333333221  3


Q ss_pred             CccEEEEcCCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          272 GADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       272 g~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      ++|++|++.|..                         ...+.+...|+.. |+|++++..
T Consensus       107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~  165 (283)
T 1g0o_A          107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSI  165 (283)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCG
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CeEEEEech
Confidence            699999998842                         1234555666665 899999753

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=97.04  E-value=0.004  Score=55.47  Aligned_cols=81  Identities=20%  Similarity=0.201  Sum_probs=53.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EEcCCCCCCccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.    +.+... .+.-+-.+.+++.+.+.+...  ++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   89 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGK   89 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4688999998 9999999999888999 8999999988765543    334332 222211011233333333221  27


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        90 id~lv~nAg~   99 (256)
T 3gaf_A           90 ITVLVNNAGG   99 (256)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.04  E-value=0.0053  Score=54.35  Aligned_cols=81  Identities=23%  Similarity=0.239  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc-hHHH-HHHhcCCcE-EEcCCCCCCccHHHHHHhhcC--CCcc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFE-IGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGAD  274 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~-~~~~-~~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d  274 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++. ++.+ .+++.+... .+.-+-.+.+++.+.+.+...  +++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            4678999998 9999999999999999 899999887 6654 344555332 222211011233333333221  3699


Q ss_pred             EEEEcCCC
Q 018022          275 YCFECVGL  282 (362)
Q Consensus       275 ~vid~~g~  282 (362)
                      ++|.+.|.
T Consensus        85 ~lv~nAg~   92 (249)
T 2ew8_A           85 ILVNNAGI   92 (249)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=97.04  E-value=0.0078  Score=53.48  Aligned_cols=81  Identities=20%  Similarity=0.218  Sum_probs=54.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d~  275 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++.++++.+. +++... .+.-+-.+.+++.+.+.+...  +++|+
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   86 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI   86 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4678999998 9999999999999999 8999999998877654 455432 222221011233333333221  26999


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|.+.|.
T Consensus        87 li~~Ag~   93 (261)
T 3n74_A           87 LVNNAGI   93 (261)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999884

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=97.04  E-value=0.0085  Score=53.80  Aligned_cols=79  Identities=18%  Similarity=0.228  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EE--cCCCCCCccHHHHH---Hhhc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FV--NSKNCGDKSVSQII---IDMT  269 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv--~~~~~~~~~~~~~i---~~~~  269 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++++.+.    +.+... .+  |-.+  .+++.+.+   .+..
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   96 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS--RTERDKLMQTVAHVF   96 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            4688999998 9999999999999999 9999999987765432    234322 22  2222  12222222   2223


Q ss_pred             CCCccEEEEcCCC
Q 018022          270 DGGADYCFECVGL  282 (362)
Q Consensus       270 ~~g~d~vid~~g~  282 (362)
                      ++++|++|++.|.
T Consensus        97 ~g~id~lv~nAg~  109 (273)
T 1ae1_A           97 DGKLNILVNNAGV  109 (273)
T ss_dssp             TSCCCEEEECCCC
T ss_pred             CCCCcEEEECCCC
Confidence            2579999999884

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=97.04  E-value=0.0082  Score=52.31  Aligned_cols=99  Identities=10%  Similarity=0.061  Sum_probs=64.2

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCc--E-EEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT--E-FVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~--~-vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      ++||+|+ |++|.+.+..+...|+ +|++++++.++++.+.+ ++..  . ..|-.+   .+-.+.+.+.....+|++|.
T Consensus         3 ~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~~~~~~d~lv~   78 (230)
T 3guy_A            3 LIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCLSNNVGYRARDLAS---HQEVEQLFEQLDSIPSTVVH   78 (230)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTCSSCCCEEECCTTC---HHHHHHHHHSCSSCCSEEEE
T ss_pred             EEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhccCeEeecCCC---HHHHHHHHHHHhhcCCEEEE
Confidence            6899998 9999999999999999 89999999988877654 4322  1 123222   22233333323334599999


Q ss_pred             cCCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          279 CVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       279 ~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      +.|..                         ...+.++..++...++++.++..
T Consensus        79 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~  131 (230)
T 3guy_A           79 SAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMST  131 (230)
T ss_dssp             CCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCG
T ss_pred             eCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeec
Confidence            98842                         12334555565542688888754

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=97.03  E-value=0.0025  Score=57.49  Aligned_cols=81  Identities=19%  Similarity=0.246  Sum_probs=53.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCc-EEEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EFVNSKNCGDKSVSQIIIDMTD--GGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~d~  275 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+. +++.. .++.-+-.+.+.+.+.+.+...  +++|+
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            4678999998 9999999999999999 9999999988766654 34432 2222221011233333333221  26999


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|.+.|.
T Consensus        83 lv~~Ag~   89 (281)
T 3m1a_A           83 LVNNAGR   89 (281)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999984

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.03  E-value=0.007  Score=53.40  Aligned_cols=79  Identities=18%  Similarity=0.199  Sum_probs=52.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++++.+.++.-...+.-+- .+.+-.+.+.+.. +++|++|.+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~-~~id~lv~~   81 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDV-TKKKQIDQFANEV-ERLDVLFNV   81 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCT-TCHHHHHHHHHHC-SCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhccCceEEEeeC-CCHHHHHHHHHHh-CCCCEEEEC
Confidence            4678999998 9999999999999999 9999999887766554432112222211 1122222333222 379999999


Q ss_pred             CCC
Q 018022          280 VGL  282 (362)
Q Consensus       280 ~g~  282 (362)
                      .|.
T Consensus        82 Ag~   84 (246)
T 2ag5_A           82 AGF   84 (246)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            884

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.03  E-value=0.0064  Score=54.31  Aligned_cols=81  Identities=19%  Similarity=0.215  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcC-Cc-EEEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFG-VT-EFVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g-~~-~vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.    +.+ .. ..+..+-.+.+++.+.+.+...  +
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG   87 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4688999988 9999999999999999 9999999988765532    233 12 2222221011233333333221  2


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus        88 ~id~lvnnAg~   98 (262)
T 3pk0_A           88 GIDVVCANAGV   98 (262)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.03  E-value=0.0091  Score=53.42  Aligned_cols=79  Identities=20%  Similarity=0.189  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hc--CCc-EEEcCCCCCCccHHHHHHhhcCCC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RF--GVT-EFVNSKNCGDKSVSQIIIDMTDGG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~--g~~-~vv~~~~~~~~~~~~~i~~~~~~g  272 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.    +.  +.. ..+..+- .+.+..+.+.+.. ++
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~-g~   85 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADL-GTEQGCQDVIEKY-PK   85 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCT-TSHHHHHHHHHHC-CC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCC-CCHHHHHHHHHhc-CC
Confidence            4678999998 9999999999999999 9999999987765432    22  221 1221111 1123333333322 37


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        86 id~lv~nAg~   95 (267)
T 3t4x_A           86 VDILINNLGI   95 (267)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.02  E-value=0.0041  Score=55.96  Aligned_cols=81  Identities=21%  Similarity=0.213  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hc---C---Cc-EEEcCCCCCCccHHHHHHhhcC-
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF---G---VT-EFVNSKNCGDKSVSQIIIDMTD-  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~---g---~~-~vv~~~~~~~~~~~~~i~~~~~-  270 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++++.+. ++   .   .. .++.-+-.+.+++.+.+.+... 
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            4678999998 9999999999989999 9999999988766543 22   1   11 2222111011233333332221 


Q ss_pred             -CCccEEEEcCCC
Q 018022          271 -GGADYCFECVGL  282 (362)
Q Consensus       271 -~g~d~vid~~g~  282 (362)
                       +++|++|.+.|.
T Consensus        84 ~g~id~lv~~Ag~   96 (278)
T 1spx_A           84 FGKLDILVNNAGA   96 (278)
T ss_dssp             HSCCCEEEECCC-
T ss_pred             cCCCCEEEECCCC
Confidence             269999999884

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.02  E-value=0.0031  Score=56.60  Aligned_cols=79  Identities=20%  Similarity=0.182  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADYC  276 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d~v  276 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++++.+..-.... ..|-.+  .+++.+.+.+...  +++|++
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~iD~l   91 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGH-PLLLLARRVERLKALNLPNTLCAQVDVTD--KYTFDTAITRAEKIYGPADAI   91 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHTTCCTTEEEEECCTTC--HHHHHHHHHHHHHHHCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHhhcCCceEEEecCCC--HHHHHHHHHHHHHHCCCCCEE
Confidence            4678999998 9999999999999999 8999999887765543222211 112222  1233333333221  379999


Q ss_pred             EEcCCC
Q 018022          277 FECVGL  282 (362)
Q Consensus       277 id~~g~  282 (362)
                      |.+.|.
T Consensus        92 vnnAg~   97 (266)
T 3p19_A           92 VNNAGM   97 (266)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999985

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=97.01  E-value=0.0077  Score=53.62  Aligned_cols=81  Identities=15%  Similarity=0.161  Sum_probs=52.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEEcCCCCCCccHHHHHHh---hcCC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFVNSKNCGDKSVSQIIID---MTDG  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv~~~~~~~~~~~~~i~~---~~~~  271 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.+.. .++.-+-.+.+++.+.+.+   ..++
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   86 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   86 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999998 9999999999999999 9999999887765432    22432 2222111011223333322   2224


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus        87 ~id~lv~~Ag~   97 (260)
T 2ae2_A           87 KLNILVNNAGI   97 (260)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999983

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.00  E-value=0.0053  Score=54.80  Aligned_cols=79  Identities=25%  Similarity=0.357  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EE--cCCCCCCccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FV--NSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv--~~~~~~~~~~~~~i~~~~~--  270 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++++.+.    +.+... ++  |-.+  .+++.+.+.+...  
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   82 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTS--EEAVIGTVDSVVRDF   82 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHHh
Confidence            4678999998 9999999999999999 8999999887765432    224322 22  2222  1233333333221  


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +++|++|.+.|.
T Consensus        83 g~id~lv~nAg~   94 (262)
T 1zem_A           83 GKIDFLFNNAGY   94 (262)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            269999999874

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.00  E-value=0.011  Score=52.98  Aligned_cols=79  Identities=18%  Similarity=0.352  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-----hcCCcE-EE--cCCCCCCccHHHHHHhhcC-
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-----RFGVTE-FV--NSKNCGDKSVSQIIIDMTD-  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-----~~g~~~-vv--~~~~~~~~~~~~~i~~~~~-  270 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++++.+.     ..+... ++  |-.+  .+++.+.+.+... 
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~   96 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN--YEEVKKLLEAVKEK   96 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4678999998 9999999999999999 8999999887765432     224332 22  2222  1233333333221 


Q ss_pred             -CCccEEEEcCCC
Q 018022          271 -GGADYCFECVGL  282 (362)
Q Consensus       271 -~g~d~vid~~g~  282 (362)
                       +++|++|.+.|.
T Consensus        97 ~g~iD~lvnnAg~  109 (267)
T 1vl8_A           97 FGKLDTVVNAAGI  109 (267)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence             369999999884

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=96.98  E-value=0.011  Score=52.19  Aligned_cols=105  Identities=14%  Similarity=0.159  Sum_probs=63.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc--hHHHHHHhc--CCc-EEEcCCCCCC-ccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS--EKFEIGKRF--GVT-EFVNSKNCGD-KSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~--~~~~~~~~~--g~~-~vv~~~~~~~-~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ |++|.+.++.+...|+++|++++++.  +..+.+.+.  +.. .++.-+-.+. +++.+.+.+...  +
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            3678999988 99999999999999995488888876  334444332  222 2222221112 233333333221  2


Q ss_pred             CccEEEEcCCCH-----------------HHHHHHHHHhcc-----CCceEEEEccC
Q 018022          272 GADYCFECVGLA-----------------SLVQEAYACCRK-----GWGKTIVLGVD  306 (362)
Q Consensus       272 g~d~vid~~g~~-----------------~~~~~~~~~l~~-----~~G~iv~~G~~  306 (362)
                      ++|++|.+.|..                 ...+.++..+..     + |+|+.++..
T Consensus        84 ~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~-g~iv~isS~  139 (254)
T 1sby_A           84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPG-GIIANICSV  139 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC-EEEEEECCG
T ss_pred             CCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCC-CEEEEECch
Confidence            699999999842                 123344455533     4 789998754

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=96.98  E-value=0.0063  Score=52.24  Aligned_cols=92  Identities=12%  Similarity=0.179  Sum_probs=64.2

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE-cCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV-NSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      +|||+|+ |.+|...++.+...|+ +|++++++.++.+.+. .+...+. |..+   .+. +.   +  +++|+||.++|
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-~~~~~~~~D~~d---~~~-~~---~--~~~d~vi~~ag   70 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH-KDINILQKDIFD---LTL-SD---L--SDQNVVVDAYG   70 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC-SSSEEEECCGGG---CCH-HH---H--TTCSEEEECCC
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc-CCCeEEeccccC---hhh-hh---h--cCCCEEEECCc
Confidence            6899998 9999999999999998 9999999988877664 3433222 2222   222 22   2  26999999998


Q ss_pred             CH--------HHHHHHHHHhccC-CceEEEEccC
Q 018022          282 LA--------SLVQEAYACCRKG-WGKTIVLGVD  306 (362)
Q Consensus       282 ~~--------~~~~~~~~~l~~~-~G~iv~~G~~  306 (362)
                      ..        .....+++.++.. .+++++++..
T Consensus        71 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~  104 (221)
T 3ew7_A           71 ISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA  104 (221)
T ss_dssp             SSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred             CCccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence            64        2345667777663 2688888653

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=96.98  E-value=0.0046  Score=54.76  Aligned_cols=79  Identities=27%  Similarity=0.388  Sum_probs=54.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCc-EEE--cCCCCCCccHHHHHHhhcC--CCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EFV--NSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~-~vv--~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+ ++.. ..+  |-.+  .+++.+.+.+...  +++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~i   84 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGDNGKGMALNVTN--PESIEAVLKAITDEFGGV   84 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHHCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceEEEEeCCC--HHHHHHHHHHHHHHcCCC
Confidence            4788999988 9999999999999999 99999999887766543 3322 222  2222  2333333333321  379


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        85 D~lv~nAg~   93 (248)
T 3op4_A           85 DILVNNAGI   93 (248)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=96.97  E-value=0.0069  Score=53.98  Aligned_cols=81  Identities=14%  Similarity=0.128  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEE-cCCchHHHHHH----hcCCcE-EEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFEIGK----RFGVTE-FVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~-~~~~~~~~~~~----~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|+++ +++.++.+.+.    +.+... ++.-+-.+.+++.+.+.+...  +
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG   81 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5788999998 9999999999999999 77775 88877665443    234332 222221011233333333221  2


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus        82 ~id~lv~nAg~   92 (258)
T 3oid_A           82 RLDVFVNNAAS   92 (258)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            68999999974

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.97  E-value=0.0085  Score=52.69  Aligned_cols=81  Identities=16%  Similarity=0.223  Sum_probs=53.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCC--cEEE--cCCCCCCccHHHHHHhhcC-
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGV--TEFV--NSKNCGDKSVSQIIIDMTD-  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~--~~vv--~~~~~~~~~~~~~i~~~~~-  270 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++++.+.    +.+.  ..++  +-+..+.+++.+.+.+... 
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            5789999998 9999999999999999 8999999988776543    2331  2232  2211011223333332221 


Q ss_pred             -CCccEEEEcCCC
Q 018022          271 -GGADYCFECVGL  282 (362)
Q Consensus       271 -~g~d~vid~~g~  282 (362)
                       +++|++|.+.|.
T Consensus        92 ~g~id~lv~nAg~  104 (247)
T 3i1j_A           92 FGRLDGLLHNASI  104 (247)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence             269999999884

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=96.97  E-value=0.0075  Score=54.37  Aligned_cols=81  Identities=21%  Similarity=0.155  Sum_probs=52.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EEcCCCCCCccHHHHHHhhcC-CCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FVNSKNCGDKSVSQIIIDMTD-GGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv~~~~~~~~~~~~~i~~~~~-~g~  273 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++.++.+.+.    +.+... .+..+-.+.+++.+.+.+... +++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~i  110 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPV  110 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            5789999988 9999999999999999 9999999887654432    234322 222111012333333322211 479


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus       111 D~lvnnAg~  119 (275)
T 4imr_A          111 DILVINASA  119 (275)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=96.96  E-value=0.0036  Score=55.73  Aligned_cols=103  Identities=15%  Similarity=0.135  Sum_probs=64.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHH-cCCCEEEEEcCCchHHHHHH----hcCC-cEEEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARL-CGATRIIGVDVISEKFEIGK----RFGV-TEFVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~-~g~~~vi~~~~~~~~~~~~~----~~g~-~~vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ |.+|.+.++.+.. .|+ +|++++++.++.+.+.    ..+. ..++.-+-.+.+++.+.+.++..  +
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4678999998 9999999888887 899 9999999877654432    2232 22332221011233333333221  2


Q ss_pred             CccEEEEcCCCH----------H---------------HHHHHHHHhccCCceEEEEcc
Q 018022          272 GADYCFECVGLA----------S---------------LVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       272 g~d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ++|++|.+.|..          .               .++.+...+++. |+|++++.
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~~sS  139 (276)
T 1wma_A           82 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ-GRVVNVSS  139 (276)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECC
T ss_pred             CCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCC-CEEEEECC
Confidence            699999998742          1               123344455565 89999975

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.95  E-value=0.0089  Score=54.05  Aligned_cols=81  Identities=20%  Similarity=0.217  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c---CCcEEEcCCCCCCc-cHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F---GVTEFVNSKNCGDK-SVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~---g~~~vv~~~~~~~~-~~~~~i~~~~~--~g  272 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++++.+.+ +   +....+..-+..+. ++.+.+.+...  ++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG   85 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4688999998 9999999999999999 89999999887765432 2   33222211111112 22233332221  26


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        86 iD~lvnnAg~   95 (280)
T 3tox_A           86 LDTAFNNAGA   95 (280)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999883

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=96.95  E-value=0.0091  Score=52.86  Aligned_cols=78  Identities=14%  Similarity=0.232  Sum_probs=52.1

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCc-EEEcCCCCCCccHHHHHHhhcCC--CccEEEE
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EFVNSKNCGDKSVSQIIIDMTDG--GADYCFE  278 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~-~vv~~~~~~~~~~~~~i~~~~~~--g~d~vid  278 (362)
                      ++||+|+ |++|.+.++.+...|+ +|++++++.++++.+. +++.. ..+.-+-.+.+++.+.+.+....  ++|++|+
T Consensus         2 ~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             EEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            6889988 9999999999999999 9999999988776543 34422 22222210123333444443332  7999999


Q ss_pred             cCCC
Q 018022          279 CVGL  282 (362)
Q Consensus       279 ~~g~  282 (362)
                      +.|.
T Consensus        81 nAg~   84 (248)
T 3asu_A           81 NAGL   84 (248)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9873

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=96.94  E-value=0.011  Score=52.87  Aligned_cols=105  Identities=19%  Similarity=0.250  Sum_probs=66.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC-chHHHH----HHhcCCcE-EEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI-SEKFEI----GKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~-~~~~~~----~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++ .++.+.    +++.+... .+.-+-.+.+++.+.+.+...  +
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   95 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG   95 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5788999998 9999999999999999 88776554 444333    33345432 222221012333333333321  2


Q ss_pred             CccEEEEcCCCH-------------------------HHHHHHHHHhccCCceEEEEccCC
Q 018022          272 GADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVDQ  307 (362)
Q Consensus       272 g~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~~~  307 (362)
                      .+|++|.+.|..                         ...+.++..++++ |+|++++...
T Consensus        96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~~  155 (270)
T 3is3_A           96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEG-GRIVLTSSNT  155 (270)
T ss_dssp             CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CeEEEEeCch
Confidence            699999998851                         1245567778886 9999998643

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=96.94  E-value=0.0073  Score=53.62  Aligned_cols=41  Identities=20%  Similarity=0.162  Sum_probs=35.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG  242 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~  242 (362)
                      .+.++||+|+ |.+|.+.+..+...|+ +|++++++.++.+.+
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~   47 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQET   47 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHH
Confidence            4678999998 9999999999999999 999999988876654

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.93  E-value=0.0099  Score=53.62  Aligned_cols=80  Identities=18%  Similarity=0.195  Sum_probs=52.3

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EE--cCCCCCCccHHHHHHhhcC-
Q 018022          200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FV--NSKNCGDKSVSQIIIDMTD-  270 (362)
Q Consensus       200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv--~~~~~~~~~~~~~i~~~~~-  270 (362)
                      ..+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.    +.+... .+  |-.+  .+++.+.+.+... 
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~   98 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTS--TDEVHAAVAAAVER   98 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHH
Confidence            35789999998 9999999999999999 8999999988765543    234332 22  2222  1233333333221 


Q ss_pred             -CCccEEEEcCCC
Q 018022          271 -GGADYCFECVGL  282 (362)
Q Consensus       271 -~g~d~vid~~g~  282 (362)
                       +++|++|.+.|.
T Consensus        99 ~g~id~lv~nAg~  111 (279)
T 3sju_A           99 FGPIGILVNSAGR  111 (279)
T ss_dssp             HCSCCEEEECCCC
T ss_pred             cCCCcEEEECCCC
Confidence             379999999885

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=96.93  E-value=0.0095  Score=50.78  Aligned_cols=103  Identities=14%  Similarity=0.103  Sum_probs=73.4

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc--EEEcCCCCCCccHHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIII  266 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~--~vv~~~~~~~~~~~~~i~  266 (362)
                      +.....++++++||-+|+|. |..+..+++.....+|++++.+++.++.+++    .+.+  .++..+.   .+   .+.
T Consensus        32 ~l~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~---~~~  104 (204)
T 3e05_A           32 TLSKLRLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFA---PE---GLD  104 (204)
T ss_dssp             HHHHTTCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCT---TT---TCT
T ss_pred             HHHHcCCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCCh---hh---hhh
Confidence            34667889999999999985 8888888888644499999999998888765    3432  2333221   11   111


Q ss_pred             hhcCCCccEEEEcCCC---HHHHHHHHHHhccCCceEEEEcc
Q 018022          267 DMTDGGADYCFECVGL---ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       267 ~~~~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      .  .+.+|+|+.....   ...++.+.+.|+++ |++++...
T Consensus       105 ~--~~~~D~i~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  143 (204)
T 3e05_A          105 D--LPDPDRVFIGGSGGMLEEIIDAVDRRLKSE-GVIVLNAV  143 (204)
T ss_dssp             T--SCCCSEEEESCCTTCHHHHHHHHHHHCCTT-CEEEEEEC
T ss_pred             c--CCCCCEEEECCCCcCHHHHHHHHHHhcCCC-eEEEEEec
Confidence            1  1269999987652   45678999999998 99998754

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=96.93  E-value=0.0028  Score=52.56  Aligned_cols=103  Identities=21%  Similarity=0.197  Sum_probs=72.7

Q ss_pred             HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-E-EEcCCCCCCccHHHHHHh
Q 018022          194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-E-FVNSKNCGDKSVSQIIID  267 (362)
Q Consensus       194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~-vv~~~~~~~~~~~~~i~~  267 (362)
                      .....++++++||-+|+|. |..+..+++..+..+|++++.+++.++.+++    .+.. . ++..+.      .+.+..
T Consensus        18 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~------~~~~~~   90 (178)
T 3hm2_A           18 ISALAPKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGA------PRAFDD   90 (178)
T ss_dssp             HHHHCCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCT------TGGGGG
T ss_pred             HHHhcccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecch------Hhhhhc
Confidence            4556788999999999986 8888888888744499999999998888764    3543 2 222211      111111


Q ss_pred             hcCCCccEEEEcCCCH--HHHHHHHHHhccCCceEEEEcc
Q 018022          268 MTDGGADYCFECVGLA--SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       268 ~~~~g~d~vid~~g~~--~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                       ..+.||+|+......  ..++.+.+.|+++ |++++...
T Consensus        91 -~~~~~D~i~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  128 (178)
T 3hm2_A           91 -VPDNPDVIFIGGGLTAPGVFAAAWKRLPVG-GRLVANAV  128 (178)
T ss_dssp             -CCSCCSEEEECC-TTCTTHHHHHHHTCCTT-CEEEEEEC
T ss_pred             -cCCCCCEEEECCcccHHHHHHHHHHhcCCC-CEEEEEee
Confidence             114799999766544  3689999999998 99987764

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.93  E-value=0.009  Score=53.81  Aligned_cols=80  Identities=21%  Similarity=0.291  Sum_probs=51.9

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcC-------------CchHHHHH----HhcCCcE-EE--cCCCCCC
Q 018022          200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-------------ISEKFEIG----KRFGVTE-FV--NSKNCGD  258 (362)
Q Consensus       200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~-------------~~~~~~~~----~~~g~~~-vv--~~~~~~~  258 (362)
                      -.+.++||+|+ +++|.+.++.+...|+ +|+++++             +.++++.+    ++.+... .+  |-.+  .
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~   89 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD--D   89 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC--H
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC--H
Confidence            35789999998 9999999999999999 9999887             45554443    2334332 22  2222  1


Q ss_pred             ccHHHHHHhhcC--CCccEEEEcCCC
Q 018022          259 KSVSQIIIDMTD--GGADYCFECVGL  282 (362)
Q Consensus       259 ~~~~~~i~~~~~--~g~d~vid~~g~  282 (362)
                      +++.+.+.+...  +++|++|.+.|.
T Consensus        90 ~~v~~~~~~~~~~~g~id~lvnnAg~  115 (280)
T 3pgx_A           90 AALRELVADGMEQFGRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            233333333221  279999999884

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=96.92  E-value=0.0086  Score=53.83  Aligned_cols=103  Identities=24%  Similarity=0.343  Sum_probs=65.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc-hHHHHH----HhcCCcE-EEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFEIG----KRFGVTE-FVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~-~~~~~~----~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++. ++.+.+    ++.+... .+.-+-.+.+++.+.+.+...  +
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG  108 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5789999998 9999999999999999 888875443 444332    3345432 222221012333333333321  2


Q ss_pred             CccEEEEcCCCH-------------------------HHHHHHHHHhccCCceEEEEcc
Q 018022          272 GADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       272 g~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ++|++|.+.|..                         ...+.+...|+++ |+|++++.
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-g~iv~isS  166 (271)
T 3v2g_A          109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG-GRIITIGS  166 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECC
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CEEEEEeC
Confidence            799999998841                         1244556677776 99999975

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=96.92  E-value=0.01  Score=52.87  Aligned_cols=81  Identities=14%  Similarity=0.192  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCc-EEEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EFVNSKNCGDKSVSQIIIDMTD--GGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~d~  275 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+. ++... .++.-+-.+.+++.+.+.+...  +++|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   84 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   84 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999998 9999999999999999 9999999888776543 33321 2222211011233333333221  26999


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|.+.|.
T Consensus        85 lv~~Ag~   91 (260)
T 1nff_A           85 LVNNAGI   91 (260)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999884

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.92  E-value=0.0064  Score=55.46  Aligned_cols=104  Identities=20%  Similarity=0.196  Sum_probs=65.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCC---c-EEEcCCCCCCccHHHHHHhhcC-
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGV---T-EFVNSKNCGDKSVSQIIIDMTD-  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~---~-~vv~~~~~~~~~~~~~i~~~~~-  270 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++++.+.    +.+.   . .++.-+-.+.+++.+.+.+... 
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  103 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK  103 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence            4678999998 9999999999999999 9999999988765432    2232   2 2222211011233333333221 


Q ss_pred             -CCccEEEEcCCCH---------------------------HHHHHHHHHhc-cCCceEEEEccC
Q 018022          271 -GGADYCFECVGLA---------------------------SLVQEAYACCR-KGWGKTIVLGVD  306 (362)
Q Consensus       271 -~g~d~vid~~g~~---------------------------~~~~~~~~~l~-~~~G~iv~~G~~  306 (362)
                       +++|++|.+.|..                           ...+.++..+. .+ |+|++++..
T Consensus       104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~  167 (297)
T 1xhl_A          104 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSI  167 (297)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCG
T ss_pred             cCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCc
Confidence             3699999998831                           12344555554 44 899999753

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=96.91  E-value=0.0037  Score=56.52  Aligned_cols=80  Identities=18%  Similarity=0.223  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc--EEEcCCCCCCccHHHHHHhhc--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT--EFVNSKNCGDKSVSQIIIDMT--DG  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~--~vv~~~~~~~~~~~~~i~~~~--~~  271 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++++.+.    +.+..  .++..+-.+.+.+.+.+.+..  .+
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  105 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG  105 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            3678999998 9999999999999999 9999999988776543    23432  222222101122323333221  13


Q ss_pred             CccEEEEc-CC
Q 018022          272 GADYCFEC-VG  281 (362)
Q Consensus       272 g~d~vid~-~g  281 (362)
                      ++|++|.+ .|
T Consensus       106 ~iD~li~naag  116 (286)
T 1xu9_A          106 GLDMLILNHIT  116 (286)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999998 45

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=96.91  E-value=0.0059  Score=54.18  Aligned_cols=81  Identities=21%  Similarity=0.263  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchH--HHHHHhcCCcE-EEcCCCCCCccHHHHHHhhcC--CCcc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--FEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGAD  274 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~--~~~~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d  274 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++  .+.+++.+... ++..+-.+.+++.+.+.+...  +++|
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVD   81 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            3678999998 9999999999999999 89999887652  12233334332 222211011233333332221  2699


Q ss_pred             EEEEcCCC
Q 018022          275 YCFECVGL  282 (362)
Q Consensus       275 ~vid~~g~  282 (362)
                      ++|.+.|.
T Consensus        82 ~lv~~Ag~   89 (255)
T 2q2v_A           82 ILVNNAGI   89 (255)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999883

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.91  E-value=0.015  Score=52.28  Aligned_cols=78  Identities=22%  Similarity=0.301  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCcE-EEcCCCCCCccHHHHHHhhcC-CCccEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTE-FVNSKNCGDKSVSQIIIDMTD-GGADYC  276 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~~-vv~~~~~~~~~~~~~i~~~~~-~g~d~v  276 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++.++.+.+. +++... ++.-+-.+.+++.+.+.+... +++|++
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l  107 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA  107 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence            4678999998 9999999999999999 9999999988876654 455432 222221012334444444421 278999


Q ss_pred             EEc
Q 018022          277 FEC  279 (362)
Q Consensus       277 id~  279 (362)
                      |.+
T Consensus       108 v~~  110 (281)
T 3ppi_A          108 VVA  110 (281)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            988

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=96.91  E-value=0.0053  Score=51.79  Aligned_cols=100  Identities=20%  Similarity=0.241  Sum_probs=67.2

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHcCC---------CEEEEEcCCchHHHHHHhcCCcEEE-cCCCCCCccHHHHHHh
Q 018022          198 NVEVGSTVVIFGLGSIGLAVAEGARLCGA---------TRIIGVDVISEKFEIGKRFGVTEFV-NSKNCGDKSVSQIIID  267 (362)
Q Consensus       198 ~~~~g~~vlI~Gag~~G~~a~~la~~~g~---------~~vi~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~~i~~  267 (362)
                      .++++++||.+|+|+ |..+..+++..+.         .+|++++.++.+.     .....++ ..+- ...+..+.+.+
T Consensus        19 ~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~~~d~-~~~~~~~~~~~   91 (196)
T 2nyu_A           19 ILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLCPADV-TDPRTSQRILE   91 (196)
T ss_dssp             CCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEECSCCT-TSHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCCeEEEeccC-CCHHHHHHHHH
Confidence            368899999999988 9999999998773         4999999887431     1112333 2221 11233444444


Q ss_pred             hcCC-CccEEEE-----cCCCH------------HHHHHHHHHhccCCceEEEEcc
Q 018022          268 MTDG-GADYCFE-----CVGLA------------SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       268 ~~~~-g~d~vid-----~~g~~------------~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ..++ .||+|+.     +++..            ..+..+.+.|+++ |++++.-.
T Consensus        92 ~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  146 (196)
T 2nyu_A           92 VLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPG-GTFLCKTW  146 (196)
T ss_dssp             HSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             hcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCC-CEEEEEec
Confidence            4444 7999994     33432            4567889999998 99987644

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=96.90  E-value=0.0073  Score=54.17  Aligned_cols=81  Identities=15%  Similarity=0.150  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEEcCCCCCCccHHHHHHhhc--CCC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFVNSKNCGDKSVSQIIIDMT--DGG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv~~~~~~~~~~~~~i~~~~--~~g  272 (362)
                      .+.++||+|+ |++|.+.+..+...|+ +|++++++.++.+.+.    +.+.. .++.-+-.+.+.+.+.+.+..  -++
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  108 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD  108 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            4678999998 9999999999999999 8999999887765432    23432 222222101123333333321  137


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus       109 iD~li~~Ag~  118 (272)
T 1yb1_A          109 VSILVNNAGV  118 (272)
T ss_dssp             CSEEEECCCC
T ss_pred             CcEEEECCCc
Confidence            9999999984

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=96.90  E-value=0.0081  Score=54.59  Aligned_cols=104  Identities=19%  Similarity=0.178  Sum_probs=65.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchH-HHH----HHhcCCcE-EEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FEI----GKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~-~~~----~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++ .+.    +++.+... ++.-+-.+.+++.+.+.+...  +
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  124 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG  124 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5789999998 9999999999999999 89999887653 222    23344432 222221011233333333221  2


Q ss_pred             CccEEEEcCCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          272 GADYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       272 g~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      ++|++|.+.|..                          ...+.++..++++ |+|++++..
T Consensus       125 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-g~iv~isS~  184 (291)
T 3ijr_A          125 SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQG-DVIINTASI  184 (291)
T ss_dssp             SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTT-CEEEEECCT
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhC-CEEEEEech
Confidence            699999987731                          1234455566676 899998753

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.90  E-value=0.013  Score=52.70  Aligned_cols=80  Identities=23%  Similarity=0.258  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh---cCCc-EEEcCCCCCCccHHHHHHhhc--CCCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVT-EFVNSKNCGDKSVSQIIIDMT--DGGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~---~g~~-~vv~~~~~~~~~~~~~i~~~~--~~g~  273 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++++..+.+++   .+.. ..+..+- .+.+-.+.+.+..  .+++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~g~i  107 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGGSAEAVVADL-ADLEGAANVAEELAATRRV  107 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTCEEEEEECCT-TCHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCCcEEEEEecC-CCHHHHHHHHHHHHhcCCC
Confidence            4789999998 9999999999999999 89999876554444443   2332 2222211 1122222222211  1379


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus       108 D~lv~nAg~  116 (273)
T 3uf0_A          108 DVLVNNAGI  116 (273)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCCC
Confidence            999999885

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=96.90  E-value=0.013  Score=53.27  Aligned_cols=104  Identities=19%  Similarity=0.146  Sum_probs=65.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCch--HHHH----HHhcCCcEEEcCCCCCC-ccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--KFEI----GKRFGVTEFVNSKNCGD-KSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~--~~~~----~~~~g~~~vv~~~~~~~-~~~~~~i~~~~~--  270 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++.+  +.+.    +++.+....+..-+..+ +++.+.+.+...  
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            5789999998 9999999999999999 8998887632  2322    23345433222211111 222222322221  


Q ss_pred             CCccEEEEcCCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          271 GGADYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       271 ~g~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      +++|++|.+.|..                          ...+.++..++++ |+|++++..
T Consensus       127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-g~Iv~isS~  187 (294)
T 3r3s_A          127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKG-ASIITTSSI  187 (294)
T ss_dssp             TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTT-CEEEEECCG
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC-CEEEEECCh
Confidence            3799999998841                          1234455667776 999999764

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=96.90  E-value=0.0068  Score=54.03  Aligned_cols=103  Identities=19%  Similarity=0.206  Sum_probs=64.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEE-cCCchHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~-~~~~~~~~~~----~~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|+++ .++.++.+.+    ++.+.. ..+.-+-.+.+++.+.+.+...  +
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG   85 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4689999998 9999999999999999 77777 6666554433    333432 2232221011233333333321  3


Q ss_pred             CccEEEEcCCCH--------------------------HHHHHHHHHhccCCceEEEEcc
Q 018022          272 GADYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       272 g~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ++|++|.+.|..                          ...+.++..++++ |+|+.++.
T Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-g~iv~isS  144 (259)
T 3edm_A           86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKG-GAIVTFSS  144 (259)
T ss_dssp             SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECC
T ss_pred             CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CEEEEEcC
Confidence            799999998742                          1233455566666 89999975

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=96.90  E-value=0.0052  Score=55.87  Aligned_cols=80  Identities=14%  Similarity=0.094  Sum_probs=51.4

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCC-c-EEE--cCCCCCC-ccHHHHHHhhc
Q 018022          200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGV-T-EFV--NSKNCGD-KSVSQIIIDMT  269 (362)
Q Consensus       200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~-~-~vv--~~~~~~~-~~~~~~i~~~~  269 (362)
                      ..+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.    +.+. . .++  |-.+  . +.+...+..+.
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~~v~~~~~~~~   86 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTD--PIATMSSLADFIK   86 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTS--CHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCC--cHHHHHHHHHHHH
Confidence            35788999998 9999999999999999 9999999988754432    2222 1 222  2222  2 22222222221


Q ss_pred             C--CCccEEEEcCCC
Q 018022          270 D--GGADYCFECVGL  282 (362)
Q Consensus       270 ~--~g~d~vid~~g~  282 (362)
                      .  +++|++|.+.|.
T Consensus        87 ~~~g~iD~lv~nAg~  101 (311)
T 3o26_A           87 THFGKLDILVNNAGV  101 (311)
T ss_dssp             HHHSSCCEEEECCCC
T ss_pred             HhCCCCCEEEECCcc
Confidence            1  379999999984

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=96.89  E-value=0.0058  Score=52.71  Aligned_cols=96  Identities=14%  Similarity=0.091  Sum_probs=63.8

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  282 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~  282 (362)
                      +|||+|+ |.+|...++.+...|+ +|++++++.++.+.+  .+ .+++..+-   .+..+.+.+... ++|+||.++|.
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~--~~-~~~~~~D~---~d~~~~~~~~~~-~~d~vi~~ag~   73 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY--NN-VKAVHFDV---DWTPEEMAKQLH-GMDAIINVSGS   73 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC--TT-EEEEECCT---TSCHHHHHTTTT-TCSEEEECCCC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc--CC-ceEEEecc---cCCHHHHHHHHc-CCCEEEECCcC
Confidence            6899998 9999999999999998 999999988765433  12 23333322   221345555544 69999999985


Q ss_pred             HH---------HHHHHHHHhccC-CceEEEEccCC
Q 018022          283 AS---------LVQEAYACCRKG-WGKTIVLGVDQ  307 (362)
Q Consensus       283 ~~---------~~~~~~~~l~~~-~G~iv~~G~~~  307 (362)
                      ..         ....+++.++.. .+++++++...
T Consensus        74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  108 (219)
T 3dqp_A           74 GGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIF  108 (219)
T ss_dssp             TTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence            41         233455555543 14899887643

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=96.89  E-value=0.014  Score=52.66  Aligned_cols=80  Identities=18%  Similarity=0.225  Sum_probs=51.8

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcC-CchHHHHH----HhcCCcE-EE--cCCCCCCccHHHHHHhhcC
Q 018022          200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIG----KRFGVTE-FV--NSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~-~~~~~~~~----~~~g~~~-vv--~~~~~~~~~~~~~i~~~~~  270 (362)
                      -.+.++||+|+ |++|.+.++.+...|+ +|+++++ +.++.+.+    +..+... ++  |-.+  .+++.+.+.+...
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~  103 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLAD--LSSHQATVDAVVA  103 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTS--GGGHHHHHHHHHH
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHH
Confidence            35789999998 9999999999999999 8888875 55554432    3334332 22  2222  2344444433322


Q ss_pred             --CCccEEEEcCCC
Q 018022          271 --GGADYCFECVGL  282 (362)
Q Consensus       271 --~g~d~vid~~g~  282 (362)
                        +++|++|.+.|.
T Consensus       104 ~~g~iD~lvnnAg~  117 (280)
T 4da9_A          104 EFGRIDCLVNNAGI  117 (280)
T ss_dssp             HHSCCCEEEEECC-
T ss_pred             HcCCCCEEEECCCc
Confidence              269999999986

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.88  E-value=0.015  Score=45.98  Aligned_cols=94  Identities=17%  Similarity=0.187  Sum_probs=61.1

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      +.+|+|+|+|.+|...++.+...|. +|+++++++++.+.+.+ ++...+. .+.   .+ .+.+.+..-.++|+||.++
T Consensus         4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~~-~d~---~~-~~~l~~~~~~~~d~vi~~~   77 (140)
T 1lss_A            4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALVIN-GDC---TK-IKTLEDAGIEDADMYIAVT   77 (140)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEEEE-SCT---TS-HHHHHHTTTTTCSEEEECC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhcCcEEEE-cCC---CC-HHHHHHcCcccCCEEEEee
Confidence            3579999999999999999988998 89999999888877664 5654332 221   11 2223322112699999999


Q ss_pred             CCHHHHH---HHHHHhccCCceEEEE
Q 018022          281 GLASLVQ---EAYACCRKGWGKTIVL  303 (362)
Q Consensus       281 g~~~~~~---~~~~~l~~~~G~iv~~  303 (362)
                      +....-.   ...+.+.+  ++++..
T Consensus        78 ~~~~~~~~~~~~~~~~~~--~~ii~~  101 (140)
T 1lss_A           78 GKEEVNLMSSLLAKSYGI--NKTIAR  101 (140)
T ss_dssp             SCHHHHHHHHHHHHHTTC--CCEEEE
T ss_pred             CCchHHHHHHHHHHHcCC--CEEEEE
Confidence            9874222   23334444  356554

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.88  E-value=0.0089  Score=51.52  Aligned_cols=92  Identities=14%  Similarity=0.131  Sum_probs=64.4

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE-cCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV-NSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      +|||+|+ |.+|...++.+...|. +|++++++.++.+.+...+...+. |..+   .+.     +.. +++|+||.++|
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~D~~d---~~~-----~~~-~~~d~vi~~ag   71 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGATVATLVKEPLV---LTE-----ADL-DSVDAVVDALS   71 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCTTSEEEECCGGG---CCH-----HHH-TTCSEEEECCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccccCCCceEEeccccc---ccH-----hhc-ccCCEEEECCc
Confidence            5899998 9999999999999999 999999998887766554554332 2222   222     111 26999999998


Q ss_pred             CH----------HHHHHHHHHhccCCceEEEEcc
Q 018022          282 LA----------SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       282 ~~----------~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ..          .....+++.++..+++++.++.
T Consensus        72 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS  105 (224)
T 3h2s_A           72 VPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG  105 (224)
T ss_dssp             CCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred             cCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence            72          2244566666654368888853

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=96.87  E-value=0.0062  Score=54.66  Aligned_cols=101  Identities=19%  Similarity=0.248  Sum_probs=64.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEE-cCCchHHHHH----HhcCCcE-EE--cCCCCCCccHHHHHHhhcC-
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFEIG----KRFGVTE-FV--NSKNCGDKSVSQIIIDMTD-  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~-~~~~~~~~~~----~~~g~~~-vv--~~~~~~~~~~~~~i~~~~~-  270 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|+++ .++.++.+.+    +..+... .+  |-.+  .+++.+.+.+... 
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~  102 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSD--PAAVRRLFATAEEA  102 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            5789999998 9999999999888999 77766 5555555443    2344332 22  2222  1223333333221 


Q ss_pred             -CCccEEEEcCCCH-------------------------HHHHHHHHHhccCCceEEEEcc
Q 018022          271 -GGADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       271 -~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                       +++|++|.+.|..                         ...+.++..++.+ |+|++++.
T Consensus       103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-g~iv~isS  162 (267)
T 3u5t_A          103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG-GRIINMST  162 (267)
T ss_dssp             HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CeEEEEeC
Confidence             2799999999842                         1234566677776 99999975

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=96.87  E-value=0.0064  Score=53.93  Aligned_cols=81  Identities=20%  Similarity=0.185  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcC-CchHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~-~~~~~~~~----~~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ |.+|.+.++.+...|+ +|+++++ +.++.+.+    ++.+.. .++.-+-.+.+++.+.+.+...  +
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4678999998 9999999999988999 8999998 66655433    223432 2222221011233333333221  2


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus        85 ~id~li~~Ag~   95 (261)
T 1gee_A           85 KLDVMINNAGL   95 (261)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999883

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=96.87  E-value=0.0062  Score=53.98  Aligned_cols=96  Identities=13%  Similarity=0.159  Sum_probs=64.5

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcC--CCccEEEE
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTD--GGADYCFE  278 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~--~g~d~vid  278 (362)
                      +.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.     ....++-.+  .+++.+.+.+...  +.+|++|.
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~d~~d--~~~v~~~~~~~~~~~g~iD~li~   93 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNAD-----HSFTIKDSG--EEEIKSVIEKINSKSIKVDTFVC   93 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTSS-----EEEECSCSS--HHHHHHHHHHHHTTTCCEEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc-----cceEEEeCC--HHHHHHHHHHHHHHcCCCCEEEE
Confidence            678999998 9999999999999999 89999988765421     111122111  1334444444433  27999999


Q ss_pred             cCCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          279 CVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       279 ~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      +.|..                          ...+.+...++++ |+|++++..
T Consensus        94 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~  146 (251)
T 3orf_A           94 AAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQG-GLFVLTGAS  146 (251)
T ss_dssp             CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred             CCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccC-CEEEEEech
Confidence            99831                          1234455667776 999999754

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=96.87  E-value=0.011  Score=53.12  Aligned_cols=81  Identities=20%  Similarity=0.168  Sum_probs=51.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcC-------------CchHHHHH----HhcCCcE-EEcCCCCCCccH
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-------------ISEKFEIG----KRFGVTE-FVNSKNCGDKSV  261 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~-------------~~~~~~~~----~~~g~~~-vv~~~~~~~~~~  261 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|+++++             +.++++.+    +..+... .+.-+-.+.+++
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL   88 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            5789999998 9999999999999999 9999987             44444332    2334332 221111011233


Q ss_pred             HHHHHhhcC--CCccEEEEcCCC
Q 018022          262 SQIIIDMTD--GGADYCFECVGL  282 (362)
Q Consensus       262 ~~~i~~~~~--~g~d~vid~~g~  282 (362)
                      .+.+.+...  +++|++|.+.|.
T Consensus        89 ~~~~~~~~~~~g~id~lvnnAg~  111 (277)
T 3tsc_A           89 RKVVDDGVAALGRLDIIVANAGV  111 (277)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCC
Confidence            333333221  369999999885

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=96.86  E-value=0.002  Score=57.09  Aligned_cols=103  Identities=15%  Similarity=0.085  Sum_probs=74.8

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHhc-----CCcE--EEcCCCCCCccHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRF-----GVTE--FVNSKNCGDKSVSQI  264 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~~-----g~~~--vv~~~~~~~~~~~~~  264 (362)
                      +.....++++++||-.|+|. |..+..+++..+ ..+|++++.+++.++.+++.     |.+.  ++..+      +.+.
T Consensus        88 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d------~~~~  160 (258)
T 2pwy_A           88 MVTLLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGK------LEEA  160 (258)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESC------GGGC
T ss_pred             HHHHcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECc------hhhc
Confidence            45667889999999999986 888888998853 33999999999988887753     5322  22221      1110


Q ss_pred             HHhhcCCCccEEEEcCCCH-HHHHHHHHHhccCCceEEEEcc
Q 018022          265 IIDMTDGGADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       265 i~~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                        .+..+.+|+|+...+.. ..+..+.+.|+++ |+++++..
T Consensus       161 --~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  199 (258)
T 2pwy_A          161 --ELEEAAYDGVALDLMEPWKVLEKAALALKPD-RFLVAYLP  199 (258)
T ss_dssp             --CCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred             --CCCCCCcCEEEECCcCHHHHHHHHHHhCCCC-CEEEEEeC
Confidence              11223799999877766 6688999999998 99988754

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=96.85  E-value=0.011  Score=53.24  Aligned_cols=34  Identities=29%  Similarity=0.322  Sum_probs=30.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~   44 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDIC   44 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEecc
Confidence            5789999998 9999999999999999 89999876

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=96.85  E-value=0.00085  Score=59.00  Aligned_cols=100  Identities=22%  Similarity=0.260  Sum_probs=71.7

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcE--EEcCCCCCCccHHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIII  266 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~--vv~~~~~~~~~~~~~i~  266 (362)
                      +.+...++++++||.+|+| .|..+..+++..+ .+|++++.+++..+.+++    .|...  ++..      +..   .
T Consensus        83 ~~~~l~~~~~~~vLdiG~G-~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~------d~~---~  151 (235)
T 1jg1_A           83 MLEIANLKPGMNILEVGTG-SGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILG------DGS---K  151 (235)
T ss_dssp             HHHHHTCCTTCCEEEECCT-TSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEES------CGG---G
T ss_pred             HHHhcCCCCCCEEEEEeCC-cCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEC------Ccc---c
Confidence            3456688999999999998 6888889999877 499999999988877765    34322  2221      110   1


Q ss_pred             hhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEc
Q 018022          267 DMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       267 ~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      .+... +||+|+.+.........+.+.|+++ |++++.-
T Consensus       152 ~~~~~~~fD~Ii~~~~~~~~~~~~~~~L~pg-G~lvi~~  189 (235)
T 1jg1_A          152 GFPPKAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIPV  189 (235)
T ss_dssp             CCGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             CCCCCCCccEEEECCcHHHHHHHHHHhcCCC-cEEEEEE
Confidence            11222 5999998877665557889999998 9887653

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=96.84  E-value=0.014  Score=52.13  Aligned_cols=81  Identities=23%  Similarity=0.327  Sum_probs=52.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCC---cEEEcCCCCCCccHHHHHHhhcC--CCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV---TEFVNSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~---~~vv~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+ ++++.   ..++..+-.+.+++.+.+.+...  +++
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   93 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   93 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999998 9999999999999999 999999887765543 33332   12232221011233333332211  269


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus        94 d~li~~Ag~  102 (278)
T 2bgk_A           94 DIMFGNVGV  102 (278)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCcc
Confidence            999998873

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=96.84  E-value=0.013  Score=53.23  Aligned_cols=80  Identities=20%  Similarity=0.200  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCC--CEEEEEcCCchHHHHHHh-c-----CCc-EEE--cCCCCCCccHHHHHHhh
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGA--TRIIGVDVISEKFEIGKR-F-----GVT-EFV--NSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~--~~vi~~~~~~~~~~~~~~-~-----g~~-~vv--~~~~~~~~~~~~~i~~~  268 (362)
                      .+.++||+|+ +++|.+.++.+...|+  .+|+.++++.++++.+.+ +     +.. .++  |-.+  .+++.+.+.+.
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~  109 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQ--AEKIKPFIENL  109 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTC--GGGHHHHHHTS
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCC--HHHHHHHHHHH
Confidence            4689999998 9999998877766554  389999999888765532 2     322 222  2222  24455555544


Q ss_pred             cCC--CccEEEEcCCC
Q 018022          269 TDG--GADYCFECVGL  282 (362)
Q Consensus       269 ~~~--g~d~vid~~g~  282 (362)
                      ...  ++|++|.+.|.
T Consensus       110 ~~~~g~iD~lVnnAG~  125 (287)
T 3rku_A          110 PQEFKDIDILVNNAGK  125 (287)
T ss_dssp             CGGGCSCCEEEECCCC
T ss_pred             HHhcCCCCEEEECCCc
Confidence            332  79999999883

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=96.84  E-value=0.0073  Score=54.26  Aligned_cols=79  Identities=19%  Similarity=0.220  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEE--cCCCCCCccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv--~~~~~~~~~~~~~i~~~~~--  270 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.    +.+.. ..+  |-.+  .+++.+.+.+...  
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVND--ATAVDALVESTLKEF  103 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCC--HHHHHHHHHHHHHHc
Confidence            4678999988 9999999999999999 9999999988765443    23322 222  3222  1233333333221  


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +++|++|.+.|.
T Consensus       104 g~iD~lvnnAg~  115 (270)
T 3ftp_A          104 GALNVLVNNAGI  115 (270)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            269999999984

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=96.84  E-value=0.018  Score=52.21  Aligned_cols=41  Identities=15%  Similarity=0.097  Sum_probs=35.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEc-CCchHHHHH
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISEKFEIG  242 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~-~~~~~~~~~  242 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++ ++.++.+.+
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~   50 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL   50 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHH
Confidence            4678999988 9999999999999999 899998 888776543

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=96.83  E-value=0.012  Score=52.10  Aligned_cols=80  Identities=23%  Similarity=0.279  Sum_probs=52.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      .+.++||+|+ |.+|.+.++.+...|+ +|++++++.++.+.+    ++.+.. .++.-+-.+.+++.+.+.+...  ++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   90 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR   90 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4678999998 9999999999999999 999999988765433    223432 2222221011233333333221  26


Q ss_pred             ccEEEEcCC
Q 018022          273 ADYCFECVG  281 (362)
Q Consensus       273 ~d~vid~~g  281 (362)
                      +|++|.+.|
T Consensus        91 id~vi~~Ag   99 (260)
T 3awd_A           91 VDILVACAG   99 (260)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.83  E-value=0.0088  Score=53.87  Aligned_cols=101  Identities=22%  Similarity=0.265  Sum_probs=64.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC------------chHHHHH----HhcCCcE-EE--cCCCCCCcc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI------------SEKFEIG----KRFGVTE-FV--NSKNCGDKS  260 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~------------~~~~~~~----~~~g~~~-vv--~~~~~~~~~  260 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++            .++++.+    ++.+... .+  |-.+  .++
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~   85 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRD--RAA   85 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTC--HHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCC--HHH
Confidence            4789999998 9999999999999999 89999876            4444332    2344332 22  2222  123


Q ss_pred             HHHHHHhhcC--CCccEEEEcCCCH-----------------------HHHHHHHHHhccCCceEEEEcc
Q 018022          261 VSQIIIDMTD--GGADYCFECVGLA-----------------------SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       261 ~~~~i~~~~~--~g~d~vid~~g~~-----------------------~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      +.+.+.+...  +++|++|.+.|..                       ...+.++..+..+ |+|+.++.
T Consensus        86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS  154 (287)
T 3pxx_A           86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSG-ASIITTGS  154 (287)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTT-CEEEEECC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcC-cEEEEecc
Confidence            3333333321  2699999998851                       1233455556665 89999875

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=96.83  E-value=0.012  Score=52.89  Aligned_cols=81  Identities=19%  Similarity=0.241  Sum_probs=53.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcEEEcCCCCC-CccHHHHHHhhc--CCC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCG-DKSVSQIIIDMT--DGG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~vv~~~~~~-~~~~~~~i~~~~--~~g  272 (362)
                      .|.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.    +.+....+..-+.. .+++.+.+.+..  .++
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGID  103 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            4688999998 9999999999999999 9999999988765442    33443322211111 123333333322  237


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus       104 iD~lv~nAg~  113 (271)
T 4ibo_A          104 VDILVNNAGI  113 (271)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=96.83  E-value=0.0013  Score=57.54  Aligned_cols=102  Identities=14%  Similarity=0.163  Sum_probs=70.7

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc----CCc---EEEcCCCCCCccHHHHHHh
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVT---EFVNSKNCGDKSVSQIIID  267 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~----g~~---~vv~~~~~~~~~~~~~i~~  267 (362)
                      ......++.+||-+|+| .|..+..+++..+..+|++++.+++.++.+++.    |..   .++..+      ..+.+..
T Consensus        48 ~~~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d------~~~~~~~  120 (233)
T 2gpy_A           48 HLLKMAAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGD------ALQLGEK  120 (233)
T ss_dssp             HHHHHHCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSC------GGGSHHH
T ss_pred             HHHhccCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECC------HHHHHHh
Confidence            33445678899999998 588888899887433999999999988877653    542   233222      2222222


Q ss_pred             hc-CCCccEEEEcCCC---HHHHHHHHHHhccCCceEEEEc
Q 018022          268 MT-DGGADYCFECVGL---ASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       268 ~~-~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      .. .+.||+|+.....   ...++.+.+.|+++ |++++.-
T Consensus       121 ~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~  160 (233)
T 2gpy_A          121 LELYPLFDVLFIDAAKGQYRRFFDMYSPMVRPG-GLILSDN  160 (233)
T ss_dssp             HTTSCCEEEEEEEGGGSCHHHHHHHHGGGEEEE-EEEEEET
T ss_pred             cccCCCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEEc
Confidence            22 2379999987654   35578899999998 9998763

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=96.82  E-value=0.011  Score=52.65  Aligned_cols=81  Identities=15%  Similarity=0.159  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EEcCCCCCCccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.    +.+... .+..+-.+.+++.+.+.+...  ++
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   91 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGG   91 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4688999998 9999999999999999 9999999887765432    234322 222111011233333332211  36


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        92 iD~lv~~Ag~  101 (260)
T 2zat_A           92 VDILVSNAAV  101 (260)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.82  E-value=0.013  Score=51.94  Aligned_cols=74  Identities=22%  Similarity=0.157  Sum_probs=51.7

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      -.+.++||+|+ |++|.+.++.+...|+ +|++++++++..   ++++...++ .+-  .+++.+.+.++.  ++|++|.
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~---~~~~~~~~~-~D~--~~~~~~~~~~~~--~iD~lv~   87 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELL---KRSGHRYVV-CDL--RKDLDLLFEKVK--EVDILVL   87 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH---HHTCSEEEE-CCT--TTCHHHHHHHSC--CCSEEEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHH---HhhCCeEEE-eeH--HHHHHHHHHHhc--CCCEEEE
Confidence            46789999998 9999999999999999 899999887443   344432333 221  134444444432  6999999


Q ss_pred             cCCC
Q 018022          279 CVGL  282 (362)
Q Consensus       279 ~~g~  282 (362)
                      +.|.
T Consensus        88 ~Ag~   91 (249)
T 1o5i_A           88 NAGG   91 (249)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9884

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=96.82  E-value=0.0076  Score=53.16  Aligned_cols=81  Identities=15%  Similarity=0.276  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCc--EEEcCCCCCCccHHHHHHhhc-CCCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT--EFVNSKNCGDKSVSQIIIDMT-DGGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~--~vv~~~~~~~~~~~~~i~~~~-~~g~d~  275 (362)
                      .+.++||+|+ |.+|.+.++.+...|+ +|++++++.++.+.+ ++++..  .++..+-.+.+.+.+.+.+.. .+++|+
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~   88 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI   88 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence            4678999998 9999999999999999 899999998876654 334432  222222101122323332221 136999


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|.+.|.
T Consensus        89 li~~Ag~   95 (254)
T 2wsb_A           89 LVNSAGI   95 (254)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999884

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=96.82  E-value=0.0057  Score=55.10  Aligned_cols=96  Identities=15%  Similarity=0.076  Sum_probs=65.0

Q ss_pred             EEEEECC-ChHHHHHHHHHHHc-CCCEEEEEcCCchHHHHHHhcCCcEEE-cCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          204 TVVIFGL-GSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFV-NSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      +|||+|+ |.+|...++.+... |. +|++++++.++...+...+...+. |..+      .+.+.+... ++|+||.+.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~-~V~~~~R~~~~~~~~~~~~v~~~~~D~~d------~~~l~~~~~-~~d~vi~~a   73 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHID-HFHIGVRNVEKVPDDWRGKVSVRQLDYFN------QESMVEAFK-GMDTVVFIP   73 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCT-TEEEEESSGGGSCGGGBTTBEEEECCTTC------HHHHHHHTT-TCSEEEECC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCC-cEEEEECCHHHHHHhhhCCCEEEEcCCCC------HHHHHHHHh-CCCEEEEeC
Confidence            5899998 99999999888877 88 899999988876555444544322 2222      234444443 699999998


Q ss_pred             CCH-------HHHHHHHHHhccCC-ceEEEEccCC
Q 018022          281 GLA-------SLVQEAYACCRKGW-GKTIVLGVDQ  307 (362)
Q Consensus       281 g~~-------~~~~~~~~~l~~~~-G~iv~~G~~~  307 (362)
                      +..       .....+++.++..+ ++++.++.+.
T Consensus        74 ~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           74 SIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             CCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence            852       22345666666541 3788887654

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=96.82  E-value=0.0062  Score=53.74  Aligned_cols=81  Identities=17%  Similarity=0.170  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEEcCCCCCCccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      .+.++||+|+ |.+|.+.++.+...|+ +|++++++.++.+.+.    ..+.. .++..+-.+.+.+.+.+.+...  ++
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   88 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            4678999998 9999999999999999 9999999887765432    23432 2222221011223333332211  26


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        89 ~d~vi~~Ag~   98 (255)
T 1fmc_A           89 VDILVNNAGG   98 (255)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=96.81  E-value=0.01  Score=52.92  Aligned_cols=81  Identities=25%  Similarity=0.334  Sum_probs=52.6

Q ss_pred             CCCEEEEECC-C-hHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cC-Cc-EEEcCCCCCCccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-G-SIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FG-VT-EFVNSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g-~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g-~~-~vv~~~~~~~~~~~~~i~~~~~--  270 (362)
                      .+.++||+|+ | ++|.+.++.+...|+ +|++++++.++.+.+.+    .+ .. +++.-+-.+.+++.+.+.+...  
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA   99 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence            4789999998 7 799999999999999 89999999887655432    22 11 2222221012333333333321  


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +.+|++|.+.|.
T Consensus       100 g~id~li~~Ag~  111 (266)
T 3o38_A          100 GRLDVLVNNAGL  111 (266)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCcEEEECCCc
Confidence            269999999984

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=96.81  E-value=0.0037  Score=54.35  Aligned_cols=87  Identities=15%  Similarity=0.137  Sum_probs=59.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++.+             .|-.+  .+.+.+.+.++  +++|++|.+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~-------------~D~~~--~~~v~~~~~~~--g~id~lv~n   66 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG-------------LDISD--EKSVYHYFETI--GAFDHLIVT   66 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT-------------CCTTC--HHHHHHHHHHH--CSEEEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc-------------cCCCC--HHHHHHHHHHh--CCCCEEEEC
Confidence            4678999998 9999999999888899 9999987654             12222  12233333333  368888888


Q ss_pred             CCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          280 VGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       280 ~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      .|..                          ...+.+.+.++++ |+|++++..
T Consensus        67 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~~sS~  118 (223)
T 3uce_A           67 AGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQG-GSITLTSGM  118 (223)
T ss_dssp             CCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEE-EEEEEECCG
T ss_pred             CCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCC-eEEEEecch
Confidence            8742                          1234455667776 999999754

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=96.81  E-value=0.0088  Score=53.13  Aligned_cols=80  Identities=19%  Similarity=0.207  Sum_probs=50.6

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchH--HHHH-Hh---cCCc-EEEcCCCCCCccHHHHHHhhcC--C
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--FEIG-KR---FGVT-EFVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~--~~~~-~~---~g~~-~vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      +.++||+|+ |++|.+.++.+...|+ +|++++++.++  ++.+ ++   .+.. ..+.-+-.+.+++.+.+.+...  +
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLG   80 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            568999998 9999999998888899 89999988776  4432 22   2432 2222111011233333333221  2


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus        81 ~iD~lv~nAg~   91 (258)
T 3a28_C           81 GFDVLVNNAGI   91 (258)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999884

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=96.81  E-value=0.0013  Score=56.39  Aligned_cols=132  Identities=17%  Similarity=0.253  Sum_probs=80.9

Q ss_pred             ceeeeEE-eecCceEEcCCCCCccchhccccchhhhHHHHHHhc--CCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEE
Q 018022          155 SFSEYTV-LDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA--NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIG  231 (362)
Q Consensus       155 ~~a~y~~-v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~--~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~  231 (362)
                      .|.+|.. .+....+.+++.+.+..... +    +... +....  .++++.+||-+|+|. |..+..+++ .+..++++
T Consensus        17 ~w~~~~~~~~~~~~~~~~~~~~f~~~~~-~----~~~~-~~~~l~~~~~~~~~vLDiG~G~-G~~~~~l~~-~~~~~v~~   88 (205)
T 3grz_A           17 EWEDYQPVFKDQEIIRLDPGLAFGTGNH-Q----TTQL-AMLGIERAMVKPLTVADVGTGS-GILAIAAHK-LGAKSVLA   88 (205)
T ss_dssp             TTCCCCCSSTTCEEEEESCC-----CCH-H----HHHH-HHHHHHHHCSSCCEEEEETCTT-SHHHHHHHH-TTCSEEEE
T ss_pred             cccccccCCCCceeEEecCCcccCCCCC-c----cHHH-HHHHHHHhccCCCEEEEECCCC-CHHHHHHHH-CCCCEEEE
Confidence            5677766 66778888888776555421 1    1111 11122  257889999999876 666667666 45559999


Q ss_pred             EcCCchHHHHHHh----cCCc--EEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHH---HHHHHHHHhccCCceEEE
Q 018022          232 VDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS---LVQEAYACCRKGWGKTIV  302 (362)
Q Consensus       232 ~~~~~~~~~~~~~----~g~~--~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~---~~~~~~~~l~~~~G~iv~  302 (362)
                      ++.+++.++.+++    .+..  .++..+-   .+       ...+.+|+|+.......   .++.+.+.|+++ |++++
T Consensus        89 vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~-------~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~g-G~l~~  157 (205)
T 3grz_A           89 TDISDESMTAAEENAALNGIYDIALQKTSL---LA-------DVDGKFDLIVANILAEILLDLIPQLDSHLNED-GQVIF  157 (205)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCCCEEEESST---TT-------TCCSCEEEEEEESCHHHHHHHGGGSGGGEEEE-EEEEE
T ss_pred             EECCHHHHHHHHHHHHHcCCCceEEEeccc---cc-------cCCCCceEEEECCcHHHHHHHHHHHHHhcCCC-CEEEE
Confidence            9999988877765    3432  3333222   11       12347999998655432   245667789997 99988


Q ss_pred             Ecc
Q 018022          303 LGV  305 (362)
Q Consensus       303 ~G~  305 (362)
                      ...
T Consensus       158 ~~~  160 (205)
T 3grz_A          158 SGI  160 (205)
T ss_dssp             EEE
T ss_pred             Eec
Confidence            654

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=96.81  E-value=0.017  Score=52.17  Aligned_cols=81  Identities=22%  Similarity=0.274  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcC-CchHHHHHH----hc-CCcE-EEcCCCCCCccHHHHHHhhc--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIGK----RF-GVTE-FVNSKNCGDKSVSQIIIDMT--D  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~-~~~~~~~~~----~~-g~~~-vv~~~~~~~~~~~~~i~~~~--~  270 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|+++++ +.++.+.+.    +. +... ++.-+-.+.+++.+.+.+..  -
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  102 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF  102 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence            4678999998 9999999999999999 9999998 444444332    22 3222 22211101123333333322  1


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +++|++|.+.|.
T Consensus       103 g~iD~lv~nAg~  114 (281)
T 3v2h_A          103 GGADILVNNAGV  114 (281)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999985

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.80  E-value=0.0078  Score=53.44  Aligned_cols=81  Identities=19%  Similarity=0.298  Sum_probs=48.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCc-EEEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EFVNSKNCGDKSVSQIIIDMTD--GGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~d~  275 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++.++.+.+. +++.. .++.-+-.+.+++.+.+.+...  +++|+
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   84 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG   84 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999998 9999999999999999 8999999887765543 34432 2222211011233333333221  26999


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|.+.|.
T Consensus        85 lv~nAg~   91 (257)
T 3tpc_A           85 LVNCAGT   91 (257)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999884

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=96.80  E-value=0.013  Score=54.90  Aligned_cols=131  Identities=20%  Similarity=0.153  Sum_probs=86.6

Q ss_pred             CEEEEECCChHHHHHHHHHHHc-CCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          203 STVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      -+|.|+|+|.+|...+..++.. +++.+.+.+++.++.+.++++|+..   +     .++.+.+.+   ..+|+|+.|++
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~---~-----~~~~~ll~~---~~~D~V~i~tp   74 (359)
T 3e18_A            6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKI---Y-----ESYEAVLAD---EKVDAVLIATP   74 (359)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCB---C-----SCHHHHHHC---TTCCEEEECSC
T ss_pred             CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCce---e-----CCHHHHhcC---CCCCEEEEcCC
Confidence            4689999999999888877766 6633445688888888777777632   1     234444432   26999999999


Q ss_pred             CHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH------HH-HhcCcEEEEeeccCCCccccHHHHHHHHHcCCcc
Q 018022          282 LASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF------EV-LHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSY  353 (362)
Q Consensus       282 ~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~------~~-~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~  353 (362)
                      .....+.+..+++.  |+-+++-..     +..+..      .+ -.++..+.-.+...+  ...+..+.+++++|+|-
T Consensus        75 ~~~h~~~~~~al~a--GkhVl~EKP-----~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~--~p~~~~~k~~i~~g~iG  144 (359)
T 3e18_A           75 NDSHKELAISALEA--GKHVVCEKP-----VTMTSEDLLAIMDVAKRVNKHFMVHQNRRW--DEDFLIIKEMFEQKTIG  144 (359)
T ss_dssp             GGGHHHHHHHHHHT--TCEEEEESS-----CCSSHHHHHHHHHHHHHHTCCEEEECGGGG--CHHHHHHHHHHHHTTTS
T ss_pred             cHHHHHHHHHHHHC--CCCEEeeCC-----CcCCHHHHHHHHHHHHHhCCeEEEEeeecc--CHHHHHHHHHHHcCCCC
Confidence            88778888899987  576776432     223322      22 224555443332222  36688888889888763

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.80  E-value=0.0083  Score=53.07  Aligned_cols=75  Identities=20%  Similarity=0.293  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE-EcCCCCCCccHHHHHHhhc--CCCccEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMT--DGGADYC  276 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~i~~~~--~~g~d~v  276 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.+.    ++.+...+ .|-.+  .+++.+.+.+..  .+++|++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~----~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~g~id~l   78 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQ----EQYPFATEVMDVAD--AAQVAQVCQRLLAETERLDAL   78 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCCS----SCCSSEEEECCTTC--HHHHHHHHHHHHHHCSCCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchhh----hcCCceEEEcCCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            4678999998 9999999999999999 99999987653    22342221 22222  233333333322  2379999


Q ss_pred             EEcCCC
Q 018022          277 FECVGL  282 (362)
Q Consensus       277 id~~g~  282 (362)
                      |.+.|.
T Consensus        79 v~~Ag~   84 (250)
T 2fwm_X           79 VNAAGI   84 (250)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999884

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=96.79  E-value=0.017  Score=52.21  Aligned_cols=81  Identities=20%  Similarity=0.100  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc-hHHHHHH-----hcCCcE-EEcCCCCC----CccHHHHHHhh
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFEIGK-----RFGVTE-FVNSKNCG----DKSVSQIIIDM  268 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~-~~~~~~~-----~~g~~~-vv~~~~~~----~~~~~~~i~~~  268 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++. ++.+.+.     ..+... ++.-+-.+    .+++.+.+.+.
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~  100 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC  100 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence            4678999998 9999999999999999 899999887 6654332     234322 22222101    12222233222


Q ss_pred             cC--CCccEEEEcCCC
Q 018022          269 TD--GGADYCFECVGL  282 (362)
Q Consensus       269 ~~--~g~d~vid~~g~  282 (362)
                      ..  +++|++|.+.|.
T Consensus       101 ~~~~g~iD~lvnnAG~  116 (288)
T 2x9g_A          101 FRAFGRCDVLVNNASA  116 (288)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHhcCCCCEEEECCCC
Confidence            11  369999999883

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=96.79  E-value=0.018  Score=51.77  Aligned_cols=81  Identities=20%  Similarity=0.243  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC------------chHHHH----HHhcCCcE-EEcCCCCCCccHH
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI------------SEKFEI----GKRFGVTE-FVNSKNCGDKSVS  262 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~------------~~~~~~----~~~~g~~~-vv~~~~~~~~~~~  262 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++            .++++.    +++.+... .+.-+-.+.+++.
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   87 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE   87 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            5789999998 9999999999999999 89999986            333322    33445432 2221110112333


Q ss_pred             HHHHhhcC--CCccEEEEcCCC
Q 018022          263 QIIIDMTD--GGADYCFECVGL  282 (362)
Q Consensus       263 ~~i~~~~~--~g~d~vid~~g~  282 (362)
                      +.+.+...  +++|++|.+.|.
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~  109 (281)
T 3s55_A           88 SFVAEAEDTLGGIDIAITNAGI  109 (281)
T ss_dssp             HHHHHHHHHHTCCCEEEECCCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCC
Confidence            33333221  279999999884

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.78  E-value=0.0073  Score=54.76  Aligned_cols=79  Identities=24%  Similarity=0.183  Sum_probs=54.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcE-EEcCCCCCCccHHHHHHhhcCCCccEEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTE-FVNSKNCGDKSVSQIIIDMTDGGADYCF  277 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~-vv~~~~~~~~~~~~~i~~~~~~g~d~vi  277 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+ ++... ++.-+-.+.+++.+.+.++  +++|++|
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~--~~iD~lv   91 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV--SGADVLI   91 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC--CCEEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc--CCCCEEE
Confidence            5789999998 9999999999999999 99999999988776543 44322 2222210112233333333  4799999


Q ss_pred             EcCCC
Q 018022          278 ECVGL  282 (362)
Q Consensus       278 d~~g~  282 (362)
                      .+.|.
T Consensus        92 ~nAg~   96 (291)
T 3rd5_A           92 NNAGI   96 (291)
T ss_dssp             ECCCC
T ss_pred             ECCcC
Confidence            99884

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=96.78  E-value=0.01  Score=53.26  Aligned_cols=104  Identities=24%  Similarity=0.281  Sum_probs=64.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC------------chHHHHH----HhcCCcE-EEcCCCCCCccHH
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI------------SEKFEIG----KRFGVTE-FVNSKNCGDKSVS  262 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~------------~~~~~~~----~~~g~~~-vv~~~~~~~~~~~  262 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++            .++++.+    +..+... .+.-+-.+.+++.
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   90 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS   90 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            5789999998 9999999999999999 89999876            4444332    2334332 2222110112333


Q ss_pred             HHHHhhcC--CCccEEEEcCCCH---------------------HHHHHHHHHhcc---CCceEEEEccC
Q 018022          263 QIIIDMTD--GGADYCFECVGLA---------------------SLVQEAYACCRK---GWGKTIVLGVD  306 (362)
Q Consensus       263 ~~i~~~~~--~g~d~vid~~g~~---------------------~~~~~~~~~l~~---~~G~iv~~G~~  306 (362)
                      +.+.+...  +++|++|.+.|..                     ...+.++..|.+   + |+|++++..
T Consensus        91 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-g~iv~isS~  159 (278)
T 3sx2_A           91 AALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTG-GSIVLISSS  159 (278)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSC-EEEEEECCG
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC-cEEEEEccH
Confidence            33333221  3799999999852                     123344444533   4 899999754

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=96.78  E-value=0.0062  Score=54.86  Aligned_cols=79  Identities=15%  Similarity=0.117  Sum_probs=52.1

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcC---CcEEEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG---VTEFVNSKNCGDKSVSQIIIDMTD--GGADY  275 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g---~~~vv~~~~~~~~~~~~~i~~~~~--~g~d~  275 (362)
                      .++||+|+ |++|.+.++.+...|+ +|++++++.++++.+. ++.   ....+.-+-.+.+++.+.+.+...  +++|+
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  100 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRG  100 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            68999998 9999999999999999 9999999988776543 232   112222211011333334443322  26899


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|.+.|.
T Consensus       101 lvnnAG~  107 (272)
T 2nwq_A          101 LINNAGL  107 (272)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=96.78  E-value=0.019  Score=53.68  Aligned_cols=104  Identities=19%  Similarity=0.198  Sum_probs=66.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchH-----------HHHHHhcCCcE-EE--cCCCCCCccHHHHH
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-----------FEIGKRFGVTE-FV--NSKNCGDKSVSQII  265 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~-----------~~~~~~~g~~~-vv--~~~~~~~~~~~~~i  265 (362)
                      .|.++||+|+ +++|.+.++.+...|+ +|++++++.++           .+.+++.+... .+  |-.+  .+++.+.+
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d--~~~v~~~~  120 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRD--EQQISAAV  120 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHH
Confidence            5789999998 9999999999999999 89999988764           23334445432 22  3222  23333333


Q ss_pred             HhhcC--CCccEEEEcCCCH-------------------------HHHHHHHHHhccC-CceEEEEccCC
Q 018022          266 IDMTD--GGADYCFECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGVDQ  307 (362)
Q Consensus       266 ~~~~~--~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~~~  307 (362)
                      .+...  +++|++|.+.|..                         ...+.++..|+.. +|+|++++...
T Consensus       121 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~  190 (346)
T 3kvo_A          121 EKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPL  190 (346)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHH
Confidence            33321  2799999999841                         1234455555442 27999997643

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=96.77  E-value=0.0062  Score=53.72  Aligned_cols=81  Identities=21%  Similarity=0.285  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcC-CchHHHHH----HhcCCcE-EEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIG----KRFGVTE-FVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~-~~~~~~~~----~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|+++++ +.++.+.+    ++.+... .+.-+-.+.+++.+.+.+...  +
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3678999998 9999999999999999 8998888 66665443    2234322 222111011233333333221  3


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus        82 ~id~lv~nAg~   92 (246)
T 2uvd_A           82 QVDILVNNAGV   92 (246)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999884

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=96.76  E-value=0.0047  Score=54.47  Aligned_cols=76  Identities=8%  Similarity=-0.035  Sum_probs=51.7

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEE-c--CCchHHHHHH-hc-CCcEEEcCCCCCCccHHHHHHhhcCCCccE
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-D--VISEKFEIGK-RF-GVTEFVNSKNCGDKSVSQIIIDMTDGGADY  275 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~-~--~~~~~~~~~~-~~-g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~  275 (362)
                      +.++||+|+ |++|.+.++.+...|+ +|+++ +  ++.++.+.+. ++ +. .+.+.+.  -..+.+.+.+.. +++|+
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~--v~~~~~~~~~~~-g~iD~   75 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADAAERQRFESENPGT-IALAEQK--PERLVDATLQHG-EAIDT   75 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHSTTE-EECCCCC--GGGHHHHHGGGS-SCEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCHHHHHHHHHHhCCC-cccCHHH--HHHHHHHHHHHc-CCCCE
Confidence            367899998 9999999999999999 99999 6  8888776543 34 32 2333322  123334333332 37999


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|++.|.
T Consensus        76 lv~~Ag~   82 (244)
T 1zmo_A           76 IVSNDYI   82 (244)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999873

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.75  E-value=0.0058  Score=53.97  Aligned_cols=79  Identities=22%  Similarity=0.264  Sum_probs=54.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCcEE-EcCCCCCCccHHHHHHhhcC--CCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEF-VNSKNCGDKSVSQIIIDMTD--GGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~~v-v~~~~~~~~~~~~~i~~~~~--~g~d~  275 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+. +++...+ .|-.+  .+++.+.+.+...  +++|+
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~id~   80 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVAD--PASVERGFAEALAHLGRLDG   80 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTC--HHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCEEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            3678999998 9999999999999999 9999999988776554 3553222 22222  1233333333221  26999


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|++.|.
T Consensus        81 lvn~Ag~   87 (245)
T 1uls_A           81 VVHYAGI   87 (245)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999984

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=96.75  E-value=0.014  Score=52.64  Aligned_cols=82  Identities=17%  Similarity=0.270  Sum_probs=52.6

Q ss_pred             CCCCEEEEECC-Ch--HHHHHHHHHHHcCCCEEEEEcCCc--hHHHHHHh-cCCcEEEcCCCCCCccHHHHHHhhc--CC
Q 018022          200 EVGSTVVIFGL-GS--IGLAVAEGARLCGATRIIGVDVIS--EKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMT--DG  271 (362)
Q Consensus       200 ~~g~~vlI~Ga-g~--~G~~a~~la~~~g~~~vi~~~~~~--~~~~~~~~-~g~~~vv~~~~~~~~~~~~~i~~~~--~~  271 (362)
                      -.+.++||+|+ |.  +|.+.++.+...|+ +|++++++.  ++++.+.+ .+...++.-+-.+.+++.+.+.+..  -+
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWD  102 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcC
Confidence            35789999986 55  99999999999999 899999887  55555433 3433333222211233333333332  13


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      .+|++|.+.|.
T Consensus       103 ~id~li~nAg~  113 (280)
T 3nrc_A          103 GLDAIVHSIAF  113 (280)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999884

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=96.75  E-value=0.014  Score=51.93  Aligned_cols=81  Identities=19%  Similarity=0.116  Sum_probs=52.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEEcCCCCCCccHHHHHHh---hcCC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFVNSKNCGDKSVSQIIID---MTDG  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv~~~~~~~~~~~~~i~~---~~~~  271 (362)
                      .+.++||+|+ |.+|.+.++.+...|+ +|++++++.++.+.+.    +.+.. .++..+-.+.+.+.+.+.+   ..++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   91 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   91 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4678999998 9999999999999999 9999999887765432    23432 2222221011222222222   2224


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus        92 ~id~li~~Ag~  102 (266)
T 1xq1_A           92 KLDILINNLGA  102 (266)
T ss_dssp             CCSEEEEECCC
T ss_pred             CCcEEEECCCC
Confidence            79999999884

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=96.75  E-value=0.0082  Score=53.89  Aligned_cols=77  Identities=21%  Similarity=0.332  Sum_probs=50.7

Q ss_pred             CCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE--cCCCCCCccHHHHHHhhcC--CC
Q 018022          198 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV--NSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       198 ~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv--~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      ....+.++||+|+ +++|.+.++.+...|+ +|++++++.++..     +....+  |-.+  .+++.+.+.+...  ++
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~   81 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDV-----NVSDHFKIDVTN--EEEVKEAVEKTTKKYGR   81 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CT-----TSSEEEECCTTC--HHHHHHHHHHHHHHHSC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhcc-----CceeEEEecCCC--HHHHHHHHHHHHHHcCC
Confidence            4467889999998 9999999999999999 9999998876542     122222  2222  1233333333221  37


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        82 iD~lv~nAg~   91 (269)
T 3vtz_A           82 IDILVNNAGI   91 (269)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999984

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=96.74  E-value=0.0099  Score=52.93  Aligned_cols=81  Identities=19%  Similarity=0.351  Sum_probs=50.4

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHcCCCEEEEEcCCch---HHHHHH-hcCCcEEEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISE---KFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga---g~~G~~a~~la~~~g~~~vi~~~~~~~---~~~~~~-~~g~~~vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+   |++|.+.++.+...|+ +|++++++++   ..+.+. +.+...++.-+-.+.+++.+.+.+...  +
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG   85 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4678999986   5899999998888899 8999998875   333332 234333332221011233333333221  3


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus        86 ~iD~lv~~Ag~   96 (261)
T 2wyu_A           86 GLDYLVHAIAF   96 (261)
T ss_dssp             SEEEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999884

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.73  E-value=0.013  Score=52.96  Aligned_cols=87  Identities=16%  Similarity=0.187  Sum_probs=64.0

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  282 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~  282 (362)
                      .+|.|+|.|.+|...++.+...|+ +|++.++++++.+.+.+.|....        .++.+.+.     ..|+||.|++.
T Consensus         2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~~~~~-----~aDvvi~~vp~   67 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAALGAERA--------ATPCEVVE-----SCPVTFAMLAD   67 (287)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC--------SSHHHHHH-----HCSEEEECCSS
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec--------CCHHHHHh-----cCCEEEEEcCC
Confidence            478999999999999999999998 99999999999998888775321        23444443     37999999987


Q ss_pred             HHHHHHHH-------HHhccCCceEEEEc
Q 018022          283 ASLVQEAY-------ACCRKGWGKTIVLG  304 (362)
Q Consensus       283 ~~~~~~~~-------~~l~~~~G~iv~~G  304 (362)
                      +..+...+       ..++++ ..++.++
T Consensus        68 ~~~~~~v~~~~~~l~~~l~~~-~~vi~~s   95 (287)
T 3pef_A           68 PAAAEEVCFGKHGVLEGIGEG-RGYVDMS   95 (287)
T ss_dssp             HHHHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred             HHHHHHHHcCcchHhhcCCCC-CEEEeCC
Confidence            64455544       456664 4555554

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.73  E-value=0.0081  Score=55.25  Aligned_cols=88  Identities=25%  Similarity=0.269  Sum_probs=65.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++.++ +.+.+.|+..+         ++.+.+.     ..|+|+.++
T Consensus       141 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~---------~l~ell~-----~aDvV~l~~  204 (307)
T 1wwk_A          141 EGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPYPNE-ERAKEVNGKFV---------DLETLLK-----ESDVVTIHV  204 (307)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHTTCEEC---------CHHHHHH-----HCSEEEECC
T ss_pred             CCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCCCCh-hhHhhcCcccc---------CHHHHHh-----hCCEEEEec
Confidence            57799999999999999999999999 99999998877 56667776421         2333332     378999888


Q ss_pred             CCHH----HH-HHHHHHhccCCceEEEEcc
Q 018022          281 GLAS----LV-QEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       281 g~~~----~~-~~~~~~l~~~~G~iv~~G~  305 (362)
                      +...    .+ ...+..|+++ +.++.+|.
T Consensus       205 p~~~~t~~li~~~~l~~mk~g-a~lin~ar  233 (307)
T 1wwk_A          205 PLVESTYHLINEERLKLMKKT-AILINTSR  233 (307)
T ss_dssp             CCSTTTTTCBCHHHHHHSCTT-CEEEECSC
T ss_pred             CCChHHhhhcCHHHHhcCCCC-eEEEECCC
Confidence            7432    12 3567788887 88888875

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=96.73  E-value=0.0025  Score=56.03  Aligned_cols=102  Identities=14%  Similarity=0.083  Sum_probs=71.2

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHh----cCCc---EEEcCCCCCCccHHHHHH
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIII  266 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~~~i~  266 (362)
                      ......++.+||-+|+| .|..+..+++..+ ..+|++++.+++..+.+++    .|..   .++.      .+..+.+.
T Consensus        54 ~l~~~~~~~~VLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~------~d~~~~~~  126 (239)
T 2hnk_A           54 ILTKISGAKRIIEIGTF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKL------GSALETLQ  126 (239)
T ss_dssp             HHHHHHTCSEEEEECCT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE------SCHHHHHH
T ss_pred             HHHHhhCcCEEEEEeCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE------CCHHHHHH
Confidence            33445678999999987 4888889999874 2399999999988877765    3542   2222      23333333


Q ss_pred             hhc--------------C-CCccEEEEcCCCH---HHHHHHHHHhccCCceEEEEc
Q 018022          267 DMT--------------D-GGADYCFECVGLA---SLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       267 ~~~--------------~-~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      ++.              + +.||+|+......   ..+..+.+.|+++ |.+++--
T Consensus       127 ~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~  181 (239)
T 2hnk_A          127 VLIDSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPG-GLLIADN  181 (239)
T ss_dssp             HHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             HHHhhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCC-eEEEEEc
Confidence            321              1 4799999876654   4568889999998 9988753

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=96.73  E-value=0.019  Score=53.17  Aligned_cols=41  Identities=15%  Similarity=0.097  Sum_probs=35.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEc-CCchHHHHH
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISEKFEIG  242 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~-~~~~~~~~~  242 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++ ++.++.+.+
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~   87 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL   87 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHH
Confidence            4678999998 9999999999999999 899998 888776544

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=96.72  E-value=0.054  Score=47.20  Aligned_cols=76  Identities=14%  Similarity=0.121  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcEEEcCCCCCCccHHHHHHhhcCC--CccEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDG--GADYC  276 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~~i~~~~~~--g~d~v  276 (362)
                      .+.++||+|+ |.+|.+.++.+...|+ +|++++++.++.+.+.+ ..-.+++..+-   .+ .+.+.++...  ++|++
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~---~~-~~~~~~~~~~~~~id~v   80 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDL---GD-WDATEKALGGIGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCT---TC-HHHHHHHHTTCCCCSEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCCcEEecC---CC-HHHHHHHHHHcCCCCEE
Confidence            4678999998 9999999999999999 89999998887665443 32223332221   11 2233333222  68999


Q ss_pred             EEcCC
Q 018022          277 FECVG  281 (362)
Q Consensus       277 id~~g  281 (362)
                      |.+.|
T Consensus        81 i~~Ag   85 (244)
T 1cyd_A           81 VNNAA   85 (244)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99988

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.72  E-value=0.016  Score=54.54  Aligned_cols=114  Identities=18%  Similarity=0.135  Sum_probs=75.0

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCH
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  283 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~  283 (362)
                      +|+|+|+|.+|..+++.+.. .. .|.+.+++.++++.+++......+|..+      .+.+.++.. ++|+||+|++..
T Consensus        18 kilvlGaG~vG~~~~~~L~~-~~-~v~~~~~~~~~~~~~~~~~~~~~~d~~d------~~~l~~~~~-~~DvVi~~~p~~   88 (365)
T 3abi_A           18 KVLILGAGNIGRAIAWDLKD-EF-DVYIGDVNNENLEKVKEFATPLKVDASN------FDKLVEVMK-EFELVIGALPGF   88 (365)
T ss_dssp             EEEEECCSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHTTTSEEEECCTTC------HHHHHHHHT-TCSEEEECCCGG
T ss_pred             EEEEECCCHHHHHHHHHHhc-CC-CeEEEEcCHHHHHHHhccCCcEEEecCC------HHHHHHHHh-CCCEEEEecCCc
Confidence            69999999999998887754 45 8889999999998887654333344433      334444433 589999999976


Q ss_pred             HHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 018022          284 SLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS  329 (362)
Q Consensus       284 ~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  329 (362)
                      .....+..++..+ -.++.+.... .....+. .....++++++..
T Consensus        89 ~~~~v~~~~~~~g-~~yvD~s~~~-~~~~~l~-~~a~~~g~~~i~~  131 (365)
T 3abi_A           89 LGFKSIKAAIKSK-VDMVDVSFMP-ENPLELR-DEAEKAQVTIVFD  131 (365)
T ss_dssp             GHHHHHHHHHHHT-CEEEECCCCS-SCGGGGH-HHHHHTTCEEECC
T ss_pred             ccchHHHHHHhcC-cceEeeeccc-hhhhhhh-hhhccCCceeeec
Confidence            5566677777776 6777776432 2222222 2233456666543

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=96.72  E-value=0.025  Score=51.51  Aligned_cols=81  Identities=20%  Similarity=0.167  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC------------chHHHH----HHhcCCcE-EEcCCCCCCccHH
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI------------SEKFEI----GKRFGVTE-FVNSKNCGDKSVS  262 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~------------~~~~~~----~~~~g~~~-vv~~~~~~~~~~~  262 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++            .++++.    ++..+... .+.-+-.+.+++.
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            5789999998 9999999999999999 99998876            344333    23345432 2221110112333


Q ss_pred             HHHHhhcC--CCccEEEEcCCC
Q 018022          263 QIIIDMTD--GGADYCFECVGL  282 (362)
Q Consensus       263 ~~i~~~~~--~g~d~vid~~g~  282 (362)
                      +.+.+...  +++|++|.+.|.
T Consensus       106 ~~~~~~~~~~g~iD~lv~nAg~  127 (299)
T 3t7c_A          106 AAVDDGVTQLGRLDIVLANAAL  127 (299)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHhCCCCEEEECCCC
Confidence            33333221  379999999883

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=96.72  E-value=0.0077  Score=53.27  Aligned_cols=81  Identities=22%  Similarity=0.313  Sum_probs=54.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCcEEEcCCCCC-CccHHHHHHhhcC--CCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFVNSKNCG-DKSVSQIIIDMTD--GGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~~vv~~~~~~-~~~~~~~i~~~~~--~g~d~  275 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++.++.+.+ ++++....+-.-+.. .+++.+.+.+...  +++|+
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   83 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            4789999998 9999999999999999 999999998887664 345543322211111 1223333333221  26999


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|.+.|.
T Consensus        84 lv~nAg~   90 (247)
T 3rwb_A           84 LVNNASI   90 (247)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999984

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=96.71  E-value=0.0095  Score=53.50  Aligned_cols=81  Identities=14%  Similarity=0.157  Sum_probs=50.4

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHcCCCEEEEEcCCch---HHHHHHh-cCCcEEEcCCCCCCccHHHHHHhhc--CC
Q 018022          201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISE---KFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMT--DG  271 (362)
Q Consensus       201 ~g~~vlI~Ga---g~~G~~a~~la~~~g~~~vi~~~~~~~---~~~~~~~-~g~~~vv~~~~~~~~~~~~~i~~~~--~~  271 (362)
                      .+.++||+|+   |++|.+.++.+...|+ +|++++++.+   ..+.+.+ .+...++.-+-.+.+.+.+.+.+..  -+
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   83 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4678999986   6899999999999999 8999998875   3333332 3422223222101123333333322  13


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus        84 ~id~lv~nAg~   94 (275)
T 2pd4_A           84 SLDFIVHSVAF   94 (275)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999873

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=96.71  E-value=0.011  Score=52.40  Aligned_cols=105  Identities=20%  Similarity=0.266  Sum_probs=63.9

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcC--CCEEEEEcCCchHHHHHHh-cCCcE-EEcCCCCCCccHHHHHHhhcC--CCcc
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCG--ATRIIGVDVISEKFEIGKR-FGVTE-FVNSKNCGDKSVSQIIIDMTD--GGAD  274 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g--~~~vi~~~~~~~~~~~~~~-~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d  274 (362)
                      +.++||+|+ +++|.+.++.+...|  + +|+.+++++++++.+.+ ++... .+.-+-.+.+++.+.+.+...  +++|
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   80 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKID   80 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCcc
Confidence            568999998 999999887766664  6 89999999888766543 44322 222111011233333333221  3799


Q ss_pred             EEEEcCCCH--------------------------HHHHHHHHHhccCCceEEEEccCC
Q 018022          275 YCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVDQ  307 (362)
Q Consensus       275 ~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~~  307 (362)
                      ++|.+.|..                          ...+.++..|+..+|+|++++...
T Consensus        81 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~  139 (254)
T 3kzv_A           81 SLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDA  139 (254)
T ss_dssp             EEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSC
T ss_pred             EEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCch
Confidence            999998851                          122334444444228999998653

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.71  E-value=0.0093  Score=54.66  Aligned_cols=99  Identities=11%  Similarity=0.200  Sum_probs=71.9

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc----CCc---EEEcCCCCCCccHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVT---EFVNSKNCGDKSVSQII  265 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~----g~~---~vv~~~~~~~~~~~~~i  265 (362)
                      +....+++++++||-+|+|. |..+..+++..|. +|++++.+++.++.+++.    |..   .++..+-   .+     
T Consensus        82 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~-----  151 (318)
T 2fk8_A           82 NLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGW---ED-----  151 (318)
T ss_dssp             HHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCG---GG-----
T ss_pred             HHHhcCCCCcCEEEEEcccc-hHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCh---HH-----
Confidence            44566788999999999977 8888888887788 999999999988887653    321   2222211   11     


Q ss_pred             HhhcCCCccEEEEc-----CCC---HHHHHHHHHHhccCCceEEEEcc
Q 018022          266 IDMTDGGADYCFEC-----VGL---ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       266 ~~~~~~g~d~vid~-----~g~---~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                        + ++.||+|+..     ++.   ...+..+.+.|+++ |++++.-.
T Consensus       152 --~-~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  195 (318)
T 2fk8_A          152 --F-AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQSS  195 (318)
T ss_dssp             --C-CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred             --C-CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCC-cEEEEEEe
Confidence              1 2479999976     432   35578889999998 99987654

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.71  E-value=0.0083  Score=53.38  Aligned_cols=90  Identities=19%  Similarity=0.290  Sum_probs=57.5

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc-------------------hHHHHHH----hcCCc-EEEcCCCCC
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-------------------EKFEIGK----RFGVT-EFVNSKNCG  257 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~-------------------~~~~~~~----~~g~~-~vv~~~~~~  257 (362)
                      +.+|+|+|+|++|..+++.+...|+.+++.++.+.                   .|.+.+.    +++.. .+...... 
T Consensus        31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~-  109 (249)
T 1jw9_B           31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL-  109 (249)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC-
T ss_pred             CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEecc-
Confidence            47899999999999999999999998999999887                   5655443    33322 22111110 


Q ss_pred             CccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhcc
Q 018022          258 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRK  295 (362)
Q Consensus       258 ~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~  295 (362)
                       -+ .+.+.++.. ++|+||+|++.......+.+.+..
T Consensus       110 -~~-~~~~~~~~~-~~DvVi~~~d~~~~~~~l~~~~~~  144 (249)
T 1jw9_B          110 -LD-DAELAALIA-EHDLVLDCTDNVAVRNQLNAGCFA  144 (249)
T ss_dssp             -CC-HHHHHHHHH-TSSEEEECCSSHHHHHHHHHHHHH
T ss_pred             -CC-HhHHHHHHh-CCCEEEEeCCCHHHHHHHHHHHHH
Confidence             11 112222221 599999999987644444444444

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=96.71  E-value=0.01  Score=52.96  Aligned_cols=81  Identities=16%  Similarity=0.216  Sum_probs=50.9

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHcCCCEEEEEcCCc---hHHHHHH-hcCCcEEEcCCCCCCccHHHHHHhhcCC--
Q 018022          201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVIS---EKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDG--  271 (362)
Q Consensus       201 ~g~~vlI~Ga---g~~G~~a~~la~~~g~~~vi~~~~~~---~~~~~~~-~~g~~~vv~~~~~~~~~~~~~i~~~~~~--  271 (362)
                      .+.++||+|+   |++|.+.++.+...|+ +|++++++.   +..+.+. ..+...++..+-.+.+++.+.+.+....  
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   86 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4678999986   5899999999999999 899998876   3333332 2333233322210123333444443322  


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus        87 ~iD~lv~~Ag~   97 (265)
T 1qsg_A           87 KFDGFVHSIGF   97 (265)
T ss_dssp             SEEEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999883

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=96.70  E-value=0.0094  Score=53.28  Aligned_cols=74  Identities=19%  Similarity=0.242  Sum_probs=48.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE-EcCCCCCCccHHHHHHhhcC--CCccEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTD--GGADYC  276 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~i~~~~~--~g~d~v  276 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++     ...+..+ .|-.+  .+++.+.+.+...  +++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~-----~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~g~iD~l   78 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPG-----EAKYDHIECDVTN--PDQVKASIDHIFKEYGSISVL   78 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCC-----SCSSEEEECCTTC--HHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCccc-----CCceEEEEecCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            3678999998 9999999999999999 99999987765     1112211 22222  1233333333221  269999


Q ss_pred             EEcCCC
Q 018022          277 FECVGL  282 (362)
Q Consensus       277 id~~g~  282 (362)
                      |.+.|.
T Consensus        79 v~~Ag~   84 (264)
T 2dtx_A           79 VNNAGI   84 (264)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999884

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.69  E-value=0.0074  Score=52.83  Aligned_cols=98  Identities=16%  Similarity=0.222  Sum_probs=61.3

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHH---HHHHhhcC-CCccEE
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVS---QIIIDMTD-GGADYC  276 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~---~~i~~~~~-~g~d~v  276 (362)
                      +.++||+|+ |++|.+.++.+...|+ +|++++++.++.+     +....+..+-.+.+++.   +.+.+..+ +++|++
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l   76 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   76 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCccccc-----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            568999998 9999999999999999 9999998876532     11112211110011222   22222222 479999


Q ss_pred             EEcCCC--------H------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          277 FECVGL--------A------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       277 id~~g~--------~------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      |.+.|.        .                  ...+.+...++++ |+|++++..
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~  131 (236)
T 1ooe_A           77 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG-GLLQLTGAA  131 (236)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred             EECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC-CEEEEECch
Confidence            999983        1                  0133455566666 899998753

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.69  E-value=0.019  Score=51.96  Aligned_cols=79  Identities=24%  Similarity=0.321  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchH-----------HHHHHhcCCcE-EE--cCCCCCCccHHHHH
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-----------FEIGKRFGVTE-FV--NSKNCGDKSVSQII  265 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~-----------~~~~~~~g~~~-vv--~~~~~~~~~~~~~i  265 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++.++           .+.+++.+... .+  |-.+  .+++.+.+
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~   84 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRD--GDAVAAAV   84 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTS--HHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHH
Confidence            4689999998 9999999999999999 99999988762           22233445432 22  2222  12333333


Q ss_pred             HhhcC--CCccEEEEcCCC
Q 018022          266 IDMTD--GGADYCFECVGL  282 (362)
Q Consensus       266 ~~~~~--~g~d~vid~~g~  282 (362)
                      .+...  +++|++|.+.|.
T Consensus        85 ~~~~~~~g~id~lvnnAg~  103 (285)
T 3sc4_A           85 AKTVEQFGGIDICVNNASA  103 (285)
T ss_dssp             HHHHHHHSCCSEEEECCCC
T ss_pred             HHHHHHcCCCCEEEECCCC
Confidence            33321  279999999884

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=96.69  E-value=0.0073  Score=55.68  Aligned_cols=91  Identities=20%  Similarity=0.178  Sum_probs=64.0

Q ss_pred             CEEEEECCChHHHHHHHHHHH--cCCCEEEEEcCCchH--HHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEE
Q 018022          203 STVVIFGLGSIGLAVAEGARL--CGATRIIGVDVISEK--FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCF  277 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~--~g~~~vi~~~~~~~~--~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vi  277 (362)
                      -+|.|+|+|.+|...+..+..  .+.+.+.+.+++.++  +++++++|....        .+..+.+.+.+++ ++|+||
T Consensus         5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~--------~~~~e~ll~~~~~~~iDvV~   76 (312)
T 1nvm_B            5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTT--------YAGVEGLIKLPEFADIDFVF   76 (312)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEE--------SSHHHHHHHSGGGGGEEEEE
T ss_pred             CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcc--------cCCHHHHHhccCCCCCcEEE
Confidence            478999999999998888743  466556667777665  566778886521        1123334333333 799999


Q ss_pred             EcCCCHHHHHHHHHHhcc--CCceEEE
Q 018022          278 ECVGLASLVQEAYACCRK--GWGKTIV  302 (362)
Q Consensus       278 d~~g~~~~~~~~~~~l~~--~~G~iv~  302 (362)
                      ++++.....+.+..+++.  + ..++.
T Consensus        77 ~atp~~~h~~~a~~al~a~~G-k~Vi~  102 (312)
T 1nvm_B           77 DATSASAHVQNEALLRQAKPG-IRLID  102 (312)
T ss_dssp             ECSCHHHHHHHHHHHHHHCTT-CEEEE
T ss_pred             ECCChHHHHHHHHHHHHhCCC-CEEEE
Confidence            999977767888888887  7 66665

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=96.68  E-value=0.0084  Score=53.54  Aligned_cols=103  Identities=16%  Similarity=0.169  Sum_probs=62.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCch---HHHHH----HhcCCcE-EEcCCCCCCccHHHHHHhhcC-
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE---KFEIG----KRFGVTE-FVNSKNCGDKSVSQIIIDMTD-  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~---~~~~~----~~~g~~~-vv~~~~~~~~~~~~~i~~~~~-  270 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|+++++..+   +.+.+    ++.+... .+.-+-.+.+++.+.+.+... 
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   88 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE   88 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4689999998 9999999999999999 8888866543   33322    2224322 222111011233333333221 


Q ss_pred             -CCccEEEEcCCCH-------------------------HHHHHHHHHhccCCceEEEEcc
Q 018022          271 -GGADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       271 -~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                       +++|++|.+.|..                         ...+.++..|+.+ |++++++.
T Consensus        89 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~isS  148 (262)
T 3ksu_A           89 FGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPN-GHIITIAT  148 (262)
T ss_dssp             HCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEE-EEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-CEEEEEec
Confidence             3799999999831                         1223444555666 99999865

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=96.66  E-value=0.012  Score=51.71  Aligned_cols=100  Identities=15%  Similarity=0.205  Sum_probs=61.8

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHH---HHhhcC-CCcc
Q 018022          200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQI---IIDMTD-GGAD  274 (362)
Q Consensus       200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~---i~~~~~-~g~d  274 (362)
                      ..+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+     +....+.-+-.+.+++.+.   +.+..+ +++|
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD   78 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   78 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhhcc-----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            35678999998 9999999999999999 8999998876532     1111211111001122222   222222 4799


Q ss_pred             EEEEcCCC--------H------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          275 YCFECVGL--------A------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       275 ~vid~~g~--------~------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      ++|.+.|.        .                  ...+.+...++++ |+|++++..
T Consensus        79 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-g~iv~isS~  135 (241)
T 1dhr_A           79 AILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG-GLLTLAGAK  135 (241)
T ss_dssp             EEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred             EEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC-CEEEEECCH
Confidence            99999883        1                  1123445556666 899999753

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.66  E-value=0.0085  Score=54.42  Aligned_cols=73  Identities=19%  Similarity=0.215  Sum_probs=53.5

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcC-----CcE-EEcCCCCCCccHHHHHHhhcCCC
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG-----VTE-FVNSKNCGDKSVSQIIIDMTDGG  272 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g-----~~~-vv~~~~~~~~~~~~~i~~~~~~g  272 (362)
                      -.+.+++|+|+|++|.+++..+...|+++|++++|+.+|.+.+ ++++     ... +++.     +++.+.+.     .
T Consensus       125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~-----~~l~~~l~-----~  194 (283)
T 3jyo_A          125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA-----RGIEDVIA-----A  194 (283)
T ss_dssp             CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS-----TTHHHHHH-----H
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH-----HHHHHHHh-----c
Confidence            3578999999999999999999999998899999999887654 3332     111 2222     23444444     3


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|+||+|++.
T Consensus       195 ~DiVInaTp~  204 (283)
T 3jyo_A          195 ADGVVNATPM  204 (283)
T ss_dssp             SSEEEECSST
T ss_pred             CCEEEECCCC
Confidence            8999999874

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=96.65  E-value=0.0078  Score=51.13  Aligned_cols=62  Identities=24%  Similarity=0.336  Sum_probs=43.0

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      ++||+|+ |.+|.+.++.+. .|+ +|++++++.+          ....|-.+  .+.+.+.+.+.  +++|++|.+.|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~-~V~~~~r~~~----------~~~~D~~~--~~~~~~~~~~~--~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKA-EVITAGRHSG----------DVTVDITN--IDSIKKMYEQV--GKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTS-EEEEEESSSS----------SEECCTTC--HHHHHHHHHHH--CCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCC-eEEEEecCcc----------ceeeecCC--HHHHHHHHHHh--CCCCEEEECCC
Confidence            6999998 999999998888 898 8999988764          12223222  12333334333  36899999887

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=96.65  E-value=0.0072  Score=53.88  Aligned_cols=84  Identities=17%  Similarity=0.199  Sum_probs=53.1

Q ss_pred             CCCCCCEEEEECC---ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcEEEcCCCCCCccHHHHHHhhc-
Q 018022          198 NVEVGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDMT-  269 (362)
Q Consensus       198 ~~~~g~~vlI~Ga---g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~vv~~~~~~~~~~~~~i~~~~-  269 (362)
                      ....+.++||+|+   +++|.+.++.+...|+ +|++++++++..+.++    +.+...++.-+-.+.+++.+.+.+.. 
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   88 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT   88 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            3457889999984   6899999999999999 9999988765444433    33432233222101233333333332 


Q ss_pred             -CCCccEEEEcCCC
Q 018022          270 -DGGADYCFECVGL  282 (362)
Q Consensus       270 -~~g~d~vid~~g~  282 (362)
                       .+++|++|.+.|.
T Consensus        89 ~~g~id~lv~nAg~  102 (271)
T 3ek2_A           89 HWDSLDGLVHSIGF  102 (271)
T ss_dssp             HCSCEEEEEECCCC
T ss_pred             HcCCCCEEEECCcc
Confidence             1379999999874

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=96.64  E-value=0.018  Score=50.49  Aligned_cols=81  Identities=21%  Similarity=0.273  Sum_probs=49.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEE-cCCchHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~-~~~~~~~~~~----~~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ |.+|.+.++.+...|+ +|+++ .++.++.+.+    ++.+.. .++.-+-.+.+.+.+.+.+...  +
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG   82 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4678999998 9999999999999999 88888 6666554432    233432 2222221011233333332221  2


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus        83 ~~d~vi~~Ag~   93 (247)
T 2hq1_A           83 RIDILVNNAGI   93 (247)
T ss_dssp             CCCEEEECC--
T ss_pred             CCCEEEECCCC
Confidence            69999999885

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=96.64  E-value=0.031  Score=52.55  Aligned_cols=134  Identities=14%  Similarity=-0.004  Sum_probs=86.7

Q ss_pred             CEEEEECCChHHHHHHHHHHH--------cCCCEEEEEcCCchHHHH-HHhcCCcEEEcCCCCCCccHHHHHHhhcCCCc
Q 018022          203 STVVIFGLGSIGLAVAEGARL--------CGATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGA  273 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~--------~g~~~vi~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~  273 (362)
                      =+|.|+|+|.+|...+...+.        -+++-+-+.+++.++.+. ++++|...++       .++.+.+.+   ..+
T Consensus        26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y-------~d~~ell~~---~~i   95 (393)
T 4fb5_A           26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKAT-------ADWRALIAD---PEV   95 (393)
T ss_dssp             CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEE-------SCHHHHHHC---TTC
T ss_pred             ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeec-------CCHHHHhcC---CCC
Confidence            579999999999876654432        256345556777777655 5678887665       234444432   369


Q ss_pred             cEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHH------H-HhcCcEEEEeeccCCCccccHHHHHHH
Q 018022          274 DYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFE------V-LHSGKILMGSLFGGLKAKSDIPILLKR  346 (362)
Q Consensus       274 d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~------~-~~~~~~i~g~~~~~~~~~~~l~~~l~~  346 (362)
                      |+|+.|+......+.+..+++.  |+-|++-.     ++..+..+      + -.+++.+.-.+...+  ...+.++.++
T Consensus        96 DaV~IatP~~~H~~~a~~al~a--GkhVl~EK-----Pla~~~~ea~~l~~~a~~~g~~l~vg~~~R~--~p~~~~~k~~  166 (393)
T 4fb5_A           96 DVVSVTTPNQFHAEMAIAALEA--GKHVWCEK-----PMAPAYADAERMLATAERSGKVAALGYNYIQ--NPVMRHIRKL  166 (393)
T ss_dssp             CEEEECSCGGGHHHHHHHHHHT--TCEEEECS-----CSCSSHHHHHHHHHHHHHSSSCEEECCGGGG--CHHHHHHHHH
T ss_pred             cEEEECCChHHHHHHHHHHHhc--CCeEEEcc-----CCcccHHHHHHhhhhHHhcCCcccccccccc--ChHHHHHHHH
Confidence            9999999998879999999998  68888854     33444332      2 234554443333222  3668888999


Q ss_pred             HHcCCcccc
Q 018022          347 YMDKWSYVP  355 (362)
Q Consensus       347 ~~~g~l~~~  355 (362)
                      +++|+|--.
T Consensus       167 i~~G~iG~i  175 (393)
T 4fb5_A          167 VGDGVIGRV  175 (393)
T ss_dssp             HHTTTTCSE
T ss_pred             HHcCCCccc
Confidence            999887543

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.64  E-value=0.0068  Score=54.43  Aligned_cols=81  Identities=19%  Similarity=0.221  Sum_probs=53.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCcEEEcCCCCCCccHHHHHHhhcC--CCccEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTD--GGADYC  276 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~~vv~~~~~~~~~~~~~i~~~~~--~g~d~v  276 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+. ++.....+.-+-.+.+++.+.+.+...  +++|++
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   86 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV   86 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4688999998 9999999999999999 9999999988776554 333222332221011233333332221  369999


Q ss_pred             EEcCCC
Q 018022          277 FECVGL  282 (362)
Q Consensus       277 id~~g~  282 (362)
                      |.+.|.
T Consensus        87 v~nAg~   92 (270)
T 1yde_A           87 VNNAGH   92 (270)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999874

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=96.64  E-value=0.021  Score=51.24  Aligned_cols=104  Identities=19%  Similarity=0.185  Sum_probs=64.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchH-------HH----HHHhcCCcE-EE--cCCCCCCccHHHHH
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-------FE----IGKRFGVTE-FV--NSKNCGDKSVSQII  265 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~-------~~----~~~~~g~~~-vv--~~~~~~~~~~~~~i  265 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++.++       ++    .++..+... .+  |-.+  .+++.+.+
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~   81 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIRE--EDQVRAAV   81 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTC--HHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCC--HHHHHHHH
Confidence            4688999998 9999999999999999 99999988653       22    222334332 22  2222  12333333


Q ss_pred             HhhcC--CCccEEEEcCCCH-------------------------HHHHHHHHHhccC-CceEEEEccCC
Q 018022          266 IDMTD--GGADYCFECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGVDQ  307 (362)
Q Consensus       266 ~~~~~--~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~~~  307 (362)
                      .+...  +++|++|.+.|..                         ...+.++..|+.. +|+|++++...
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~  151 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPP  151 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCC
T ss_pred             HHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChH
Confidence            33321  3799999999851                         1233455555432 28999987643

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.64  E-value=0.012  Score=55.09  Aligned_cols=97  Identities=19%  Similarity=0.188  Sum_probs=63.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE-------------EcCCCCCCccHHHHHH
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-------------VNSKNCGDKSVSQIII  266 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v-------------v~~~~~~~~~~~~~i~  266 (362)
                      -.|.+|.|.|.|.+|+.+++.++..|+ +|++.+.+.++.+.+++++++.+             +.... ...--.+.+.
T Consensus       173 L~GktV~I~G~GnVG~~~A~~l~~~Ga-kVvvsD~~~~~~~~a~~~ga~~v~~~ell~~~~DIliP~A~-~~~I~~~~~~  250 (355)
T 1c1d_A          173 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPCAM-GGVITTEVAR  250 (355)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEECSC-SCCBCHHHHH
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHhcCCEEeChHHhhcCccceecHhHH-HhhcCHHHHh
Confidence            478999999999999999999999999 89999988777666666775432             11100 0000011222


Q ss_pred             hhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEE
Q 018022          267 DMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV  302 (362)
Q Consensus       267 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~  302 (362)
                      .+   +.++|+++.+++...+++.+.|..+ |.++.
T Consensus       251 ~l---k~~iVie~AN~p~t~~eA~~~L~~~-gIlv~  282 (355)
T 1c1d_A          251 TL---DCSVVAGAANNVIADEAASDILHAR-GILYA  282 (355)
T ss_dssp             HC---CCSEECCSCTTCBCSHHHHHHHHHT-TCEEC
T ss_pred             hC---CCCEEEECCCCCCCCHHHHHHHHhC-CEEEE
Confidence            22   4677777777665333556777775 65544

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.64  E-value=0.0052  Score=60.06  Aligned_cols=91  Identities=16%  Similarity=0.140  Sum_probs=70.1

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      -.|.+|.|+|.|.+|..+++.++.+|+ +|++++++..+...+...|...         .++.+.+.     ..|+|+-+
T Consensus       275 L~GktVgIIG~G~IG~~vA~~l~~~G~-~V~v~d~~~~~~~~a~~~G~~~---------~~l~ell~-----~aDiVi~~  339 (494)
T 3d64_A          275 IAGKIAVVAGYGDVGKGCAQSLRGLGA-TVWVTEIDPICALQAAMEGYRV---------VTMEYAAD-----KADIFVTA  339 (494)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSCHHHHHHHHTTTCEE---------CCHHHHTT-----TCSEEEEC
T ss_pred             cCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCChHhHHHHHHcCCEe---------CCHHHHHh-----cCCEEEEC
Confidence            478899999999999999999999999 9999999887754455556532         12322221     48999999


Q ss_pred             CCCHHHH-HHHHHHhccCCceEEEEccC
Q 018022          280 VGLASLV-QEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       280 ~g~~~~~-~~~~~~l~~~~G~iv~~G~~  306 (362)
                      ++....+ ...+..|+++ ..++.+|..
T Consensus       340 ~~t~~lI~~~~l~~MK~g-AilINvgrg  366 (494)
T 3d64_A          340 TGNYHVINHDHMKAMRHN-AIVCNIGHF  366 (494)
T ss_dssp             SSSSCSBCHHHHHHCCTT-EEEEECSSS
T ss_pred             CCcccccCHHHHhhCCCC-cEEEEcCCC
Confidence            8766545 4678899997 899999863

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.63  E-value=0.017  Score=52.51  Aligned_cols=86  Identities=17%  Similarity=0.175  Sum_probs=63.1

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCH
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  283 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~  283 (362)
                      +|.|+|+|.+|...+..+...|. +|++.++++++.+.+.+.|...   .     .++.+.+.     .+|+||.|++.+
T Consensus         7 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~-----~~~~~~~~-----~~D~vi~~v~~~   72 (299)
T 1vpd_A            7 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAET---A-----STAKAIAE-----QCDVIITMLPNS   72 (299)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE---C-----SSHHHHHH-----HCSEEEECCSSH
T ss_pred             eEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCee---c-----CCHHHHHh-----CCCEEEEECCCH
Confidence            69999999999999888888898 8999999999988887776532   1     23333333     389999999976


Q ss_pred             HHHHHHH-------HHhccCCceEEEEc
Q 018022          284 SLVQEAY-------ACCRKGWGKTIVLG  304 (362)
Q Consensus       284 ~~~~~~~-------~~l~~~~G~iv~~G  304 (362)
                      ..+..++       ..++++ ..++.++
T Consensus        73 ~~~~~~~~~~~~l~~~l~~~-~~vv~~s   99 (299)
T 1vpd_A           73 PHVKEVALGENGIIEGAKPG-TVLIDMS   99 (299)
T ss_dssp             HHHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred             HHHHHHHhCcchHhhcCCCC-CEEEECC
Confidence            5455554       456665 5565554

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=96.62  E-value=0.0088  Score=53.19  Aligned_cols=73  Identities=21%  Similarity=0.232  Sum_probs=49.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE--cCCCCCCccHHHHHHhhc--CCCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV--NSKNCGDKSVSQIIIDMT--DGGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv--~~~~~~~~~~~~~i~~~~--~~g~d~  275 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++++.     + ..+  |-.+  .+++.+.+.+..  -+.+|+
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~-----~-~~~~~Dl~d--~~~v~~~~~~~~~~~g~iD~   90 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRSGEPPEG-----F-LAVKCDITD--TEQVEQAYKEIEETHGPVEV   90 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTT-----S-EEEECCTTS--HHHHHHHHHHHHHHTCSCSE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHhhcc-----c-eEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            3678999998 9999999999999999 99999987765432     1 222  2222  123333333322  236899


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|.+.|.
T Consensus        91 lv~nAg~   97 (253)
T 2nm0_A           91 LIANAGV   97 (253)
T ss_dssp             EEEECSC
T ss_pred             EEECCCC
Confidence            9998874

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.61  E-value=0.017  Score=53.07  Aligned_cols=88  Identities=16%  Similarity=0.145  Sum_probs=64.4

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  282 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~  282 (362)
                      .+|.|+|.|.+|...++.+...|+ .|++.++++++.+.+.+.|....        .+..+.+.     ..|+||.|++.
T Consensus        22 ~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~--------~~~~~~~~-----~aDvvi~~vp~   87 (310)
T 3doj_A           22 MEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEHGASVC--------ESPAEVIK-----KCKYTIAMLSD   87 (310)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC--------SSHHHHHH-----HCSEEEECCSS
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCeEc--------CCHHHHHH-----hCCEEEEEcCC
Confidence            579999999999999999999999 99999999999998888776421        23444443     27899999887


Q ss_pred             HHHHHHHH-------HHhccCCceEEEEcc
Q 018022          283 ASLVQEAY-------ACCRKGWGKTIVLGV  305 (362)
Q Consensus       283 ~~~~~~~~-------~~l~~~~G~iv~~G~  305 (362)
                      +..+...+       ..++++ ..++.++.
T Consensus        88 ~~~~~~v~~~~~~l~~~l~~g-~~vv~~st  116 (310)
T 3doj_A           88 PCAALSVVFDKGGVLEQICEG-KGYIDMST  116 (310)
T ss_dssp             HHHHHHHHHSTTCGGGGCCTT-CEEEECSC
T ss_pred             HHHHHHHHhCchhhhhccCCC-CEEEECCC
Confidence            65455554       345554 45555543

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.61  E-value=0.0047  Score=53.07  Aligned_cols=101  Identities=17%  Similarity=0.227  Sum_probs=71.9

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHh----cCCc--EEEcCCCCCCccHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQII  265 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~g~~--~vv~~~~~~~~~~~~~i  265 (362)
                      +.....+.++++||.+|+|. |..+..+++..+. .+|++++.+++.++.+++    .+..  .++..+      ...  
T Consensus        69 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d------~~~--  139 (215)
T 2yxe_A           69 MCELLDLKPGMKVLEIGTGC-GYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGD------GTL--  139 (215)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESC------GGG--
T ss_pred             HHHhhCCCCCCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECC------ccc--
Confidence            44666788999999999984 8888889988762 399999999988877765    2432  222211      111  


Q ss_pred             Hhhc-CCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEc
Q 018022          266 IDMT-DGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       266 ~~~~-~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                       ... .+.||+|+...........+.+.|+++ |++++.-
T Consensus       140 -~~~~~~~fD~v~~~~~~~~~~~~~~~~L~pg-G~lv~~~  177 (215)
T 2yxe_A          140 -GYEPLAPYDRIYTTAAGPKIPEPLIRQLKDG-GKLLMPV  177 (215)
T ss_dssp             -CCGGGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             -CCCCCCCeeEEEECCchHHHHHHHHHHcCCC-cEEEEEE
Confidence             111 237999999877665457889999998 9988663

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.60  E-value=0.0018  Score=55.53  Aligned_cols=100  Identities=16%  Similarity=0.072  Sum_probs=70.8

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc--EEEcCCCCCCccHHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIII  266 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~--~vv~~~~~~~~~~~~~i~  266 (362)
                      +.....++++++||-+|+|. |..+..+++. +. +|++++.+++..+.+++    .+..  .++..+.      .+...
T Consensus        69 ~~~~l~~~~~~~vLdiG~G~-G~~~~~la~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~------~~~~~  139 (210)
T 3lbf_A           69 MTELLELTPQSRVLEIGTGS-GYQTAILAHL-VQ-HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDG------WQGWQ  139 (210)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG------GGCCG
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCceEEEECCc------ccCCc
Confidence            35667889999999999974 7788888887 66 99999999998887765    3433  2332221      11110


Q ss_pred             hhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEc
Q 018022          267 DMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       267 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                        ..+.||+|+...........+.+.|+++ |++++.-
T Consensus       140 --~~~~~D~i~~~~~~~~~~~~~~~~L~pg-G~lv~~~  174 (210)
T 3lbf_A          140 --ARAPFDAIIVTAAPPEIPTALMTQLDEG-GILVLPV  174 (210)
T ss_dssp             --GGCCEEEEEESSBCSSCCTHHHHTEEEE-EEEEEEE
T ss_pred             --cCCCccEEEEccchhhhhHHHHHhcccC-cEEEEEE
Confidence              1237999999876665456788999998 9888653

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=96.60  E-value=0.0042  Score=54.94  Aligned_cols=75  Identities=21%  Similarity=0.226  Sum_probs=49.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcC--CCccEEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTD--GGADYCF  277 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~--~g~d~vi  277 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.  +  ...|-.+  .+++.+.+.+...  +++|++|
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~--~--~~~D~~~--~~~~~~~~~~~~~~~g~id~lv   86 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF--G--VEVDVTD--SDAVDRAFTAVEEHQGPVEVLV   86 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE--E--EECCTTC--HHHHHHHHHHHHHHHSSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHhc--C--eeccCCC--HHHHHHHHHHHHHHcCCCCEEE
Confidence            4678999998 9999999999999999 8999998876543322  1  2223222  1233333333221  3689999


Q ss_pred             EcCCC
Q 018022          278 ECVGL  282 (362)
Q Consensus       278 d~~g~  282 (362)
                      .+.|.
T Consensus        87 ~~Ag~   91 (247)
T 1uzm_A           87 SNAGL   91 (247)
T ss_dssp             EECSC
T ss_pred             ECCCC
Confidence            99884

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.60  E-value=0.0068  Score=53.59  Aligned_cols=81  Identities=25%  Similarity=0.254  Sum_probs=53.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EEEcCCCCCCccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+    .+.. .++.-+-.+.+++.+.+.+...  ++
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG   86 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4688999998 9999999999999999 89999999887665432    2332 2222221011233333332221  26


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        87 id~li~~Ag~   96 (253)
T 3qiv_A           87 IDYLVNNAAI   96 (253)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999985

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=96.60  E-value=0.016  Score=50.42  Aligned_cols=104  Identities=17%  Similarity=0.156  Sum_probs=69.5

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHc--CCCEEEEEcCCchHHHHHHh----cCCc-EEEcCCCCCCccHHHHHHh
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIID  267 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~--g~~~vi~~~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~~i~~  267 (362)
                      ...+.+++.+||=+|+|. |..++.+|+..  +. +|++++.+++..+.+++    .|.. .-+....   .+..+.+..
T Consensus        50 ~~~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~---gda~~~l~~  124 (221)
T 3dr5_A           50 ATTNGNGSTGAIAITPAA-GLVGLYILNGLADNT-TLTCIDPESEHQRQAKALFREAGYSPSRVRFLL---SRPLDVMSR  124 (221)
T ss_dssp             HHSCCTTCCEEEEESTTH-HHHHHHHHHHSCTTS-EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEEC---SCHHHHGGG
T ss_pred             HhhCCCCCCCEEEEcCCc-hHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEE---cCHHHHHHH
Confidence            344455566999889865 88888888876  45 99999999998877764    4543 1111111   233444433


Q ss_pred             hcCCCccEEEEcCCCH---HHHHHHHHHhccCCceEEEEc
Q 018022          268 MTDGGADYCFECVGLA---SLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       268 ~~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      +..+.||.||-.....   ..++.+.+.|+++ |.+++-.
T Consensus       125 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~dn  163 (221)
T 3dr5_A          125 LANDSYQLVFGQVSPMDLKALVDAAWPLLRRG-GALVLAD  163 (221)
T ss_dssp             SCTTCEEEEEECCCTTTHHHHHHHHHHHEEEE-EEEEETT
T ss_pred             hcCCCcCeEEEcCcHHHHHHHHHHHHHHcCCC-cEEEEeC
Confidence            3344899998765433   3577889999997 9888743

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=96.59  E-value=0.017  Score=51.26  Aligned_cols=77  Identities=19%  Similarity=0.332  Sum_probs=48.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE-EE--cCCCCCCccHHHHHHhhc-CCCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FV--NSKNCGDKSVSQIIIDMT-DGGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~-vv--~~~~~~~~~~~~~i~~~~-~~g~d~  275 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++.++  ..++++... .+  |-.+  .+++.+.+.... .+++|+
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~g~id~   82 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGED--VVADLGDRARFAAADVTD--EAAVASALDLAETMGTLRI   82 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCHH--HHHHTCTTEEEEECCTTC--HHHHHHHHHHHHHHSCEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchHH--HHHhcCCceEEEECCCCC--HHHHHHHHHHHHHhCCCCE
Confidence            4678999998 9999999999999999 89999885543  334444432 22  2222  122222222111 137999


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|++.|.
T Consensus        83 lv~nAg~   89 (257)
T 3tl3_A           83 VVNCAGT   89 (257)
T ss_dssp             EEECGGG
T ss_pred             EEECCCC
Confidence            9999984

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.59  E-value=0.012  Score=54.29  Aligned_cols=88  Identities=16%  Similarity=0.272  Sum_probs=61.6

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++.++. .+++.|+..         .++.+.+.     ..|+|+.++
T Consensus       141 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~---------~~l~ell~-----~aDvVvl~~  204 (313)
T 2ekl_A          141 AGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDILDIRE-KAEKINAKA---------VSLEELLK-----NSDVISLHV  204 (313)
T ss_dssp             TTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSCCHH-HHHHTTCEE---------CCHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCcchh-HHHhcCcee---------cCHHHHHh-----hCCEEEEec
Confidence            57899999999999999999999999 999999988764 456667542         11223332     267777777


Q ss_pred             CCHH----HH-HHHHHHhccCCceEEEEcc
Q 018022          281 GLAS----LV-QEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       281 g~~~----~~-~~~~~~l~~~~G~iv~~G~  305 (362)
                      +...    .+ ...+..|+++ +.++.++.
T Consensus       205 P~~~~t~~li~~~~l~~mk~g-a~lIn~ar  233 (313)
T 2ekl_A          205 TVSKDAKPIIDYPQFELMKDN-VIIVNTSR  233 (313)
T ss_dssp             CCCTTSCCSBCHHHHHHSCTT-EEEEESSC
T ss_pred             cCChHHHHhhCHHHHhcCCCC-CEEEECCC
Confidence            6432    12 3456677775 66666654

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.58  E-value=0.007  Score=54.60  Aligned_cols=81  Identities=22%  Similarity=0.259  Sum_probs=53.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEEcCCCCCCccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.    +.+.. ..+.-+-.+.+++.+.+.+...  ++
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  109 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGG  109 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999998 9999999999999999 9999999887765443    23322 2232221012333333333321  27


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus       110 iD~lvnnAg~  119 (276)
T 3r1i_A          110 IDIAVCNAGI  119 (276)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999885

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=96.58  E-value=0.004  Score=54.90  Aligned_cols=74  Identities=12%  Similarity=0.187  Sum_probs=47.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHH-----HhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQII-----IDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i-----~~~~~--~g  272 (362)
                      .+.++||+|+ |++|.+.++.+.. |. +|++++++.++.+.+.+......+..      ++.+..     .+...  ++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~------D~~~~~~~~~~~~~~~~~~~   75 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DH-IVYALGRNPEHLAALAEIEGVEPIES------DIVKEVLEEGGVDKLKNLDH   75 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHHTSTTEEEEEC------CHHHHHHTSSSCGGGTTCSC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHhhcCCcceec------ccchHHHHHHHHHHHHhcCC
Confidence            3678999998 9999998877755 87 89999999988887766432223321      222211     11111  26


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        76 id~lv~~Ag~   85 (245)
T 3e9n_A           76 VDTLVHAAAV   85 (245)
T ss_dssp             CSEEEECC--
T ss_pred             CCEEEECCCc
Confidence            9999999985

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=96.58  E-value=0.025  Score=51.99  Aligned_cols=81  Identities=20%  Similarity=0.200  Sum_probs=51.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC------------chHHHH----HHhcCCcE-EEcCCCCCCccHH
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI------------SEKFEI----GKRFGVTE-FVNSKNCGDKSVS  262 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~------------~~~~~~----~~~~g~~~-vv~~~~~~~~~~~  262 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++            .++++.    +++.+... ++.-+-.+.+++.
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            5789999998 9999999999999999 89988765            333332    23344432 2221110112333


Q ss_pred             HHHHhhcC--CCccEEEEcCCC
Q 018022          263 QIIIDMTD--GGADYCFECVGL  282 (362)
Q Consensus       263 ~~i~~~~~--~g~d~vid~~g~  282 (362)
                      +.+.+...  +++|++|.+.|.
T Consensus       124 ~~~~~~~~~~g~iD~lVnnAg~  145 (317)
T 3oec_A          124 AVVDEALAEFGHIDILVSNVGI  145 (317)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCC
Confidence            33333321  379999999884

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=96.58  E-value=0.013  Score=52.13  Aligned_cols=81  Identities=20%  Similarity=0.250  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcC-CchHHHHH----HhcCCcE-EEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIG----KRFGVTE-FVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~-~~~~~~~~----~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ |.+|.+.++.+...|+ +|+++++ +.++.+.+    ++.+... ++..+-.+.+.+.+.+.+...  +
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   98 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4678999998 9999999999999999 8988888 66655432    2335432 222221011233333333221  2


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus        99 ~~d~vi~~Ag~  109 (274)
T 1ja9_A           99 GLDFVMSNSGM  109 (274)
T ss_dssp             CEEEEECCCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999874

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=96.56  E-value=0.0047  Score=54.14  Aligned_cols=97  Identities=11%  Similarity=0.037  Sum_probs=63.8

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .+|||+|+ |.+|.+.++.+...| + +|++++++.++.+.+...++. ++.-+-   .+ .+.+.+... ++|++|.+.
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~-~V~~~~R~~~~~~~~~~~~~~-~~~~Dl---~d-~~~~~~~~~-~~D~vv~~a   96 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTI-KQTLFARQPAKIHKPYPTNSQ-IIMGDV---LN-HAALKQAMQ-GQDIVYANL   96 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTE-EEEEEESSGGGSCSSCCTTEE-EEECCT---TC-HHHHHHHHT-TCSEEEEEC
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCc-eEEEEEcChhhhcccccCCcE-EEEecC---CC-HHHHHHHhc-CCCEEEEcC
Confidence            57999998 999999999999999 7 999999988775443322332 222221   11 233333333 589999998


Q ss_pred             CCHH---HHHHHHHHhccC-CceEEEEccC
Q 018022          281 GLAS---LVQEAYACCRKG-WGKTIVLGVD  306 (362)
Q Consensus       281 g~~~---~~~~~~~~l~~~-~G~iv~~G~~  306 (362)
                      |...   ..+.+++.++.. .++|++++..
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~  126 (236)
T 3qvo_A           97 TGEDLDIQANSVIAAMKACDVKRLIFVLSL  126 (236)
T ss_dssp             CSTTHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             CCCchhHHHHHHHHHHHHcCCCEEEEEecc
Confidence            8753   234566666553 1589988763

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.52  E-value=0.0057  Score=59.53  Aligned_cols=90  Identities=20%  Similarity=0.269  Sum_probs=69.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      -.|.+|.|+|.|.+|..+++.++.+|+ +|++++++..+...+...|+. +        .++.+.+.     ..|+|+-+
T Consensus       255 l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~~~~~~~a~~~g~~-~--------~~l~ell~-----~aDiVi~~  319 (479)
T 1v8b_A          255 ISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-V--------VTLDEIVD-----KGDFFITC  319 (479)
T ss_dssp             CTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-E--------CCHHHHTT-----TCSEEEEC
T ss_pred             cCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCChhhHHHHHHcCCE-e--------cCHHHHHh-----cCCEEEEC
Confidence            478899999999999999999999999 999999988876555566653 2        12322221     48999999


Q ss_pred             CCCHHHH-HHHHHHhccCCceEEEEcc
Q 018022          280 VGLASLV-QEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       280 ~g~~~~~-~~~~~~l~~~~G~iv~~G~  305 (362)
                      ++....+ ...+..|+++ ..++.+|.
T Consensus       320 ~~t~~lI~~~~l~~MK~g-ailiNvgr  345 (479)
T 1v8b_A          320 TGNVDVIKLEHLLKMKNN-AVVGNIGH  345 (479)
T ss_dssp             CSSSSSBCHHHHTTCCTT-CEEEECSS
T ss_pred             CChhhhcCHHHHhhcCCC-cEEEEeCC
Confidence            8776645 3677889997 89999986

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.52  E-value=0.0092  Score=53.72  Aligned_cols=81  Identities=16%  Similarity=0.163  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEEcCCCCCCccHHHHHHhhc--CCC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFVNSKNCGDKSVSQIIIDMT--DGG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv~~~~~~~~~~~~~i~~~~--~~g  272 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.    +.+.. .++..+-.+.+++.+.+.+..  -++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   99 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP   99 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4678999998 9999999999999999 9999999887765432    23432 222221101123333333322  137


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus       100 iD~lv~~Ag~  109 (277)
T 2rhc_B          100 VDVLVNNAGR  109 (277)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.50  E-value=0.0092  Score=50.46  Aligned_cols=102  Identities=20%  Similarity=0.217  Sum_probs=70.2

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHh----cCC---cEEEcCCCCCCccHHHHHH
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGV---TEFVNSKNCGDKSVSQIII  266 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~g~---~~vv~~~~~~~~~~~~~i~  266 (362)
                      ....++++++||-+|+|. |..+..+++..+ ..++++++.+++.++.+++    .|.   -.++..+-   .++    .
T Consensus        16 ~~~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~----~   87 (197)
T 3eey_A           16 IKMFVKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGH---QNM----D   87 (197)
T ss_dssp             HHHHCCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCG---GGG----G
T ss_pred             HHhcCCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH---HHH----h
Confidence            345678899999999876 778888888754 2399999999988877764    343   22333221   111    1


Q ss_pred             hhcCCCccEEEEcCCC---------------HHHHHHHHHHhccCCceEEEEcc
Q 018022          267 DMTDGGADYCFECVGL---------------ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       267 ~~~~~g~d~vid~~g~---------------~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      +..++.||+|+...+-               ...+..+.+.|+++ |++++...
T Consensus        88 ~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~  140 (197)
T 3eey_A           88 KYIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTG-GIITVVIY  140 (197)
T ss_dssp             GTCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             hhccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCC-CEEEEEEc
Confidence            1223479999976532               24688999999998 99987753

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=96.50  E-value=0.02  Score=51.64  Aligned_cols=81  Identities=17%  Similarity=0.192  Sum_probs=50.0

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHcCCCEEEEEcCCch---HHHHHH-hcCCcEEEcCCCCCCccHHHHHHhhc--CC
Q 018022          201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISE---KFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMT--DG  271 (362)
Q Consensus       201 ~g~~vlI~Ga---g~~G~~a~~la~~~g~~~vi~~~~~~~---~~~~~~-~~g~~~vv~~~~~~~~~~~~~i~~~~--~~  271 (362)
                      .+.++||+|+   |++|.+.++.+...|+ +|++++++.+   ..+.+. +.+...++.-+-.+.+++.+.+.+..  -+
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG   98 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4678999986   5899999999999999 8999998875   333332 23322223221101123333333322  13


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus        99 ~iD~lv~~Ag~  109 (285)
T 2p91_A           99 SLDIIVHSIAY  109 (285)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.49  E-value=0.0056  Score=55.85  Aligned_cols=81  Identities=17%  Similarity=0.170  Sum_probs=52.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-h---cCC--cEEEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-R---FGV--TEFVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~---~g~--~~vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++++.+. +   .+.  ..++.-+-.+.+++.+.+.+...  +
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  118 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG  118 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            5688999998 9999999999999999 9999999988765543 2   231  12222211011233333333221  2


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus       119 ~iD~lvnnAg~  129 (293)
T 3rih_A          119 ALDVVCANAGI  129 (293)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=96.48  E-value=0.017  Score=50.76  Aligned_cols=101  Identities=18%  Similarity=0.231  Sum_probs=69.1

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCC-EEEEEcCCchHHHHHHhc----C-CcEEEcCCCCCCccHHHHHHhh
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKRF----G-VTEFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~~----g-~~~vv~~~~~~~~~~~~~i~~~  268 (362)
                      +...++||++||=+|+|. |..+..+|+..|.+ +|++++.+++.++.+++.    + ...+. .+.   .+. +... .
T Consensus        71 ~~l~ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~-~d~---~~p-~~~~-~  143 (233)
T 4df3_A           71 IELPVKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPIL-GDA---RFP-EKYR-H  143 (233)
T ss_dssp             SCCCCCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEE-SCT---TCG-GGGT-T
T ss_pred             hhcCCCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEE-Eec---cCc-cccc-c
Confidence            457799999999999976 88888899987754 999999999988777653    2 22232 222   110 0111 1


Q ss_pred             cCCCccEEEEcCCCH----HHHHHHHHHhccCCceEEEE
Q 018022          269 TDGGADYCFECVGLA----SLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       269 ~~~g~d~vid~~g~~----~~~~~~~~~l~~~~G~iv~~  303 (362)
                      ..+.+|+|+....-+    ..+..+.+.|+++ |++++.
T Consensus       144 ~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpG-G~lvI~  181 (233)
T 4df3_A          144 LVEGVDGLYADVAQPEQAAIVVRNARFFLRDG-GYMLMA  181 (233)
T ss_dssp             TCCCEEEEEECCCCTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccceEEEEEEeccCChhHHHHHHHHHHhccCC-CEEEEE
Confidence            122689988766544    3466788899998 998875

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.47  E-value=0.023  Score=52.40  Aligned_cols=89  Identities=17%  Similarity=0.206  Sum_probs=64.7

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      ..+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|+...        .++.+.+.     ..|+||.|++
T Consensus        31 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~--------~~~~e~~~-----~aDvVi~~vp   96 (320)
T 4dll_A           31 ARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAALGATIH--------EQARAAAR-----DADIVVSMLE   96 (320)
T ss_dssp             CSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCEEE--------SSHHHHHT-----TCSEEEECCS
T ss_pred             CCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHCCCEee--------CCHHHHHh-----cCCEEEEECC
Confidence            4589999999999999999999999 99999999999998887775321        22333332     4799999998


Q ss_pred             CHHHHHHHH------HHhccCCceEEEEcc
Q 018022          282 LASLVQEAY------ACCRKGWGKTIVLGV  305 (362)
Q Consensus       282 ~~~~~~~~~------~~l~~~~G~iv~~G~  305 (362)
                      .+..+...+      ..++++ ..++.++.
T Consensus        97 ~~~~~~~v~~~~~~~~~l~~~-~~vi~~st  125 (320)
T 4dll_A           97 NGAVVQDVLFAQGVAAAMKPG-SLFLDMAS  125 (320)
T ss_dssp             SHHHHHHHHTTTCHHHHCCTT-CEEEECSC
T ss_pred             CHHHHHHHHcchhHHhhCCCC-CEEEecCC
Confidence            765455444      345664 55555554

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=96.45  E-value=0.027  Score=49.20  Aligned_cols=81  Identities=15%  Similarity=0.153  Sum_probs=51.2

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCC------EEEEEcCCchHHHHHHh-c---CCc-EEEcCCCCCCccHHHHHHhhc
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGAT------RIIGVDVISEKFEIGKR-F---GVT-EFVNSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~------~vi~~~~~~~~~~~~~~-~---g~~-~vv~~~~~~~~~~~~~i~~~~  269 (362)
                      +.++||+|+ |.+|.+.++.+...|+.      +|++++++.++.+.+.+ +   +.. .++..+-.+.+.+.+.+.++.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            467999998 99999999888888875      78999998877655432 2   332 222222101123333333322


Q ss_pred             --CCCccEEEEcCCC
Q 018022          270 --DGGADYCFECVGL  282 (362)
Q Consensus       270 --~~g~d~vid~~g~  282 (362)
                        .+++|++|.+.|.
T Consensus        82 ~~~g~id~li~~Ag~   96 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGV   96 (244)
T ss_dssp             HHTSCCSEEEECCCC
T ss_pred             HhCCCCCEEEEcCCc
Confidence              1369999999883

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.45  E-value=0.011  Score=52.05  Aligned_cols=81  Identities=16%  Similarity=0.189  Sum_probs=53.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EEcCCCCCCccHHHHHHhhc--CCC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FVNSKNCGDKSVSQIIIDMT--DGG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv~~~~~~~~~~~~~i~~~~--~~g  272 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.    +.+... .+.-+-.+.+++.+.+.+..  .++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA   82 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            3678999998 9999999999999999 9999999988765543    334332 22222101233333343332  237


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        83 id~li~~Ag~   92 (247)
T 3lyl_A           83 IDILVNNAGI   92 (247)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.45  E-value=0.031  Score=51.03  Aligned_cols=88  Identities=23%  Similarity=0.204  Sum_probs=63.2

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  282 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~  282 (362)
                      .+|.|+|.|.+|...+..+...|+ .|++.++++++.+.+.+.|...+.....    +.   +     ...|+||.|++.
T Consensus         8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~~~~----e~---~-----~~aDvvi~~vp~   74 (303)
T 3g0o_A            8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEGACGAAASAR----EF---A-----GVVDALVILVVN   74 (303)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEESSST----TT---T-----TTCSEEEECCSS
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCccccCCHH----HH---H-----hcCCEEEEECCC
Confidence            579999999999999999889999 9999999999999998888764232211    11   1     147889988888


Q ss_pred             HHHHHHHH-------HHhccCCceEEEEc
Q 018022          283 ASLVQEAY-------ACCRKGWGKTIVLG  304 (362)
Q Consensus       283 ~~~~~~~~-------~~l~~~~G~iv~~G  304 (362)
                      +..+...+       ..++++ ..++.++
T Consensus        75 ~~~~~~v~~~~~~l~~~l~~g-~ivv~~s  102 (303)
T 3g0o_A           75 AAQVRQVLFGEDGVAHLMKPG-SAVMVSS  102 (303)
T ss_dssp             HHHHHHHHC--CCCGGGSCTT-CEEEECS
T ss_pred             HHHHHHHHhChhhHHhhCCCC-CEEEecC
Confidence            65455554       445554 4555554

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=96.45  E-value=0.016  Score=53.82  Aligned_cols=87  Identities=25%  Similarity=0.386  Sum_probs=61.6

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .+.+|.|+|.|.+|...++.++..|. +|++.+++.++ +.+.++|...         .++.+.+.     ..|+|+.++
T Consensus       149 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~---------~~l~~~l~-----~aDvVil~v  212 (334)
T 2dbq_A          149 YGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRTRKE-EVERELNAEF---------KPLEDLLR-----ESDFVVLAV  212 (334)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHHCCEE---------CCHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCCcch-hhHhhcCccc---------CCHHHHHh-----hCCEEEECC
Confidence            46789999999999999999999999 99999998877 5566666531         12333333     268888877


Q ss_pred             CCHH----HH-HHHHHHhccCCceEEEEc
Q 018022          281 GLAS----LV-QEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       281 g~~~----~~-~~~~~~l~~~~G~iv~~G  304 (362)
                      +...    .+ ...+..|+++ ..++.++
T Consensus       213 p~~~~t~~~i~~~~~~~mk~~-ailIn~s  240 (334)
T 2dbq_A          213 PLTRETYHLINEERLKLMKKT-AILINIA  240 (334)
T ss_dssp             CCCTTTTTCBCHHHHHHSCTT-CEEEECS
T ss_pred             CCChHHHHhhCHHHHhcCCCC-cEEEECC
Confidence            7543    12 3456677775 6666665

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.44  E-value=0.0056  Score=53.17  Aligned_cols=102  Identities=17%  Similarity=0.153  Sum_probs=70.5

Q ss_pred             hcCCCCCCEEEEECCChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHh----cCCc---EEEcCCCCCCccHHHHHHh
Q 018022          196 TANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIID  267 (362)
Q Consensus       196 ~~~~~~g~~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~~~i~~  267 (362)
                      .....++.+||-+|+| .|..+..+++..+ ..+|++++.+++..+.+++    .|..   .++.      .+..+.+.+
T Consensus        64 l~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~------~d~~~~~~~  136 (229)
T 2avd_A           64 LARLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL------KPALETLDE  136 (229)
T ss_dssp             HHHHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE------SCHHHHHHH
T ss_pred             HHHhcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEE------cCHHHHHHH
Confidence            3445678899999987 5888888888763 3399999999998887765    3431   2332      233344433


Q ss_pred             hcC----CCccEEEEcCCCH---HHHHHHHHHhccCCceEEEEcc
Q 018022          268 MTD----GGADYCFECVGLA---SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       268 ~~~----~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      +..    +.||+|+......   ..+..+.+.|+++ |.+++...
T Consensus       137 ~~~~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~~  180 (229)
T 2avd_A          137 LLAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLRV  180 (229)
T ss_dssp             HHHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             HHhcCCCCCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEECC
Confidence            321    4799988765433   4578899999998 99887643

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=96.43  E-value=0.0094  Score=53.49  Aligned_cols=80  Identities=26%  Similarity=0.274  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEEcCCCCCCccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      .+.++||+|+ |.+|.+.+..+...|+ +|++++++.++.+.+.    +.+.. .++..+-.+.+++.+.+.+...  +.
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  111 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT  111 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            4678999998 9999999988888899 8999998876554332    23432 2222221011233333333221  26


Q ss_pred             ccEEEEcCC
Q 018022          273 ADYCFECVG  281 (362)
Q Consensus       273 ~d~vid~~g  281 (362)
                      +|++|.+.|
T Consensus       112 id~li~~Ag  120 (279)
T 3ctm_A          112 IDVFVANAG  120 (279)
T ss_dssp             CSEEEECGG
T ss_pred             CCEEEECCc
Confidence            999999887

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.43  E-value=0.0066  Score=55.29  Aligned_cols=100  Identities=16%  Similarity=0.254  Sum_probs=73.2

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc---EEEcCCCCCCccHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQII  265 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~~~i  265 (362)
                      +....+++++++||-+|+|. |..+..+++..|. +|++++.+++.++.+++    .|..   .++..+      +.   
T Consensus        64 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d------~~---  132 (302)
T 3hem_A           64 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQG------WE---  132 (302)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECC------GG---
T ss_pred             HHHHcCCCCcCEEEEeeccC-cHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC------HH---
Confidence            45667889999999999986 8888899998887 99999999998877764    3432   223221      21   


Q ss_pred             HhhcCCCccEEEEcCCC---------------HHHHHHHHHHhccCCceEEEEccC
Q 018022          266 IDMTDGGADYCFECVGL---------------ASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       266 ~~~~~~g~d~vid~~g~---------------~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                       ++ .+.||+|+....-               ...+..+.+.|+++ |++++....
T Consensus       133 -~~-~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~~  185 (302)
T 3hem_A          133 -EF-DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTIT  185 (302)
T ss_dssp             -GC-CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTT-CEEEEEEEE
T ss_pred             -Hc-CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCC-cEEEEEEEe
Confidence             12 4489999974321               25578899999998 999887653

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.42  E-value=0.016  Score=55.54  Aligned_cols=98  Identities=15%  Similarity=0.177  Sum_probs=69.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .+.+|+|.|.|.+|...++.++..|. .|++++.++++.+.+++.|...++- +.    .-.+.+++.--..+|++|-++
T Consensus         3 ~~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~g~~vi~G-Da----t~~~~L~~agi~~A~~viv~~   76 (413)
T 3l9w_A            3 HGMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKFGMKVFYG-DA----TRMDLLESAGAAKAEVLINAI   76 (413)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHTTCCCEES-CT----TCHHHHHHTTTTTCSEEEECC
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhCCCeEEEc-CC----CCHHHHHhcCCCccCEEEECC
Confidence            35679999999999999999999999 9999999999999999998764442 21    113334443222799999999


Q ss_pred             CCHHHHH---HHHHHhccCCceEEEEcc
Q 018022          281 GLASLVQ---EAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       281 g~~~~~~---~~~~~l~~~~G~iv~~G~  305 (362)
                      +....-.   ...+.+.+. -+++.-..
T Consensus        77 ~~~~~n~~i~~~ar~~~p~-~~Iiara~  103 (413)
T 3l9w_A           77 DDPQTNLQLTEMVKEHFPH-LQIIARAR  103 (413)
T ss_dssp             SSHHHHHHHHHHHHHHCTT-CEEEEEES
T ss_pred             CChHHHHHHHHHHHHhCCC-CeEEEEEC
Confidence            9875332   344445564 56665543

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=96.41  E-value=0.0088  Score=53.91  Aligned_cols=81  Identities=17%  Similarity=0.225  Sum_probs=52.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hc---CCcEEEcCCCCCCccHHHHHHhhc--CCCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF---GVTEFVNSKNCGDKSVSQIIIDMT--DGGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~---g~~~vv~~~~~~~~~~~~~i~~~~--~~g~  273 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+. ++   +-..++.-+-.+.+++.+.+.+..  .+++
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARL  106 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999998 9999999999999999 9999999887765432 22   311122111101122333333221  2379


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|.+.|.
T Consensus       107 D~lvnnAg~  115 (276)
T 2b4q_A          107 DILVNNAGT  115 (276)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999883

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.40  E-value=0.0041  Score=55.15  Aligned_cols=101  Identities=14%  Similarity=0.128  Sum_probs=70.5

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHh----cCCc---EEEcCCCCCCccHHHHHHhh
Q 018022          197 ANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       197 ~~~~~g~~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~~~i~~~  268 (362)
                      ....++.+||-+|+|. |..+..+++..+ ..+|++++.+++.++.+++    .|..   .++.      .+..+.+..+
T Consensus        59 ~~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~------~d~~~~l~~~  131 (248)
T 3tfw_A           59 VRLTQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLRE------GPALQSLESL  131 (248)
T ss_dssp             HHHHTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEE------SCHHHHHHTC
T ss_pred             HhhcCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE------cCHHHHHHhc
Confidence            3456789999999875 788888888764 3499999999998887765    3543   2222      3344445444


Q ss_pred             cCC-CccEEEEcCCC---HHHHHHHHHHhccCCceEEEEcc
Q 018022          269 TDG-GADYCFECVGL---ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       269 ~~~-g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ... .||+|+-....   ...++.+.+.|+++ |.+++-..
T Consensus       132 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~~~~  171 (248)
T 3tfw_A          132 GECPAFDLIFIDADKPNNPHYLRWALRYSRPG-TLIIGDNV  171 (248)
T ss_dssp             CSCCCCSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEECC
T ss_pred             CCCCCeEEEEECCchHHHHHHHHHHHHhcCCC-eEEEEeCC
Confidence            333 79999954433   24577889999998 98887643

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=96.39  E-value=0.0059  Score=54.55  Aligned_cols=79  Identities=13%  Similarity=0.078  Sum_probs=52.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHH-HHHHhcCCcEEE-cCCCCCCccHHHHHHhhc--CCCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKF-EIGKRFGVTEFV-NSKNCGDKSVSQIIIDMT--DGGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~-~~~~~~g~~~vv-~~~~~~~~~~~~~i~~~~--~~g~d~  275 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++. +.+++.+...+. |-.+  .+++.+.+.+..  .+++|+
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~iD~  102 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGH-RVIISYRTEHASVTELRQAGAVALYGDFSC--ETGIMAFIDLLKTQTSSLRA  102 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESSCCHHHHHHHHHTCEEEECCTTS--HHHHHHHHHHHHHHCSCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhcCCeEEECCCCC--HHHHHHHHHHHHHhcCCCCE
Confidence            4678999998 9999999999999999 899999887664 445556643322 2222  123333333322  137999


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|.+.|.
T Consensus       103 lv~nAg~  109 (260)
T 3gem_A          103 VVHNASE  109 (260)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999884

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.38  E-value=0.0076  Score=56.45  Aligned_cols=90  Identities=18%  Similarity=0.218  Sum_probs=64.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++....+.+++.|+..+        .++.+.+.     ..|+|+-++
T Consensus       163 ~gktvGIIG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~l~ell~-----~aDvV~l~~  228 (351)
T 3jtm_A          163 EGKTIGTVGAGRIGKLLLQRLKPFGC-NLLYHDRLQMAPELEKETGAKFV--------EDLNEMLP-----KCDVIVINM  228 (351)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCC-EEEEECSSCCCHHHHHHHCCEEC--------SCHHHHGG-----GCSEEEECS
T ss_pred             cCCEEeEEEeCHHHHHHHHHHHHCCC-EEEEeCCCccCHHHHHhCCCeEc--------CCHHHHHh-----cCCEEEECC
Confidence            57899999999999999999999999 89999988777777777776431        12333322     367888777


Q ss_pred             CCH----HHH-HHHHHHhccCCceEEEEcc
Q 018022          281 GLA----SLV-QEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       281 g~~----~~~-~~~~~~l~~~~G~iv~~G~  305 (362)
                      +..    ..+ ...+..|+++ ..++.++.
T Consensus       229 Plt~~t~~li~~~~l~~mk~g-ailIN~aR  257 (351)
T 3jtm_A          229 PLTEKTRGMFNKELIGKLKKG-VLIVNNAR  257 (351)
T ss_dssp             CCCTTTTTCBSHHHHHHSCTT-EEEEECSC
T ss_pred             CCCHHHHHhhcHHHHhcCCCC-CEEEECcC
Confidence            632    112 4566777776 77777663

>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}

Probab=96.38  E-value=0.047  Score=52.01  Aligned_cols=132  Identities=14%  Similarity=0.009  Sum_probs=87.4

Q ss_pred             CEEEEECCChHHHHHHHHHHHc---------CCCEEEEEcCCchHHHH-HHhcCCcEEEcCCCCCCccHHHHHHhhcCCC
Q 018022          203 STVVIFGLGSIGLAVAEGARLC---------GATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGG  272 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~---------g~~~vi~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g  272 (362)
                      =+|.|+|+|.+|...+...+..         +++-+-+.++++++.+. ++++|...++       .++.+.+.+   ..
T Consensus        27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y-------~d~~~ll~~---~~   96 (412)
T 4gqa_A           27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAY-------GDWRELVND---PQ   96 (412)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEE-------SSHHHHHHC---TT
T ss_pred             ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEE-------CCHHHHhcC---CC
Confidence            4789999999998877666543         45344455777777655 5678887665       234444432   36


Q ss_pred             ccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHH------H-HhcCcEEEEeeccCCCccccHHHHHH
Q 018022          273 ADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFE------V-LHSGKILMGSLFGGLKAKSDIPILLK  345 (362)
Q Consensus       273 ~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~------~-~~~~~~i~g~~~~~~~~~~~l~~~l~  345 (362)
                      +|+|+.|+......+.+..+|+.  |+-|++-.+     +..+..+      + -.++..+.-.+...+  ...+..+.+
T Consensus        97 vD~V~I~tp~~~H~~~~~~al~a--GkhVl~EKP-----~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~--~p~~~~~k~  167 (412)
T 4gqa_A           97 VDVVDITSPNHLHYTMAMAAIAA--GKHVYCEKP-----LAVNEQQAQEMAQAARRAGVKTMVAFNNIK--TPAALLAKQ  167 (412)
T ss_dssp             CCEEEECSCGGGHHHHHHHHHHT--TCEEEEESC-----SCSSHHHHHHHHHHHHHHTCCEEEECGGGT--SHHHHHHHH
T ss_pred             CCEEEECCCcHHHHHHHHHHHHc--CCCeEeecC-----CcCCHHHHHHHHHHHHHhCCeeeeccceec--CHHHHHHHH
Confidence            99999999988878999999998  588888542     3333322      2 234544433333332  366888889


Q ss_pred             HHHcCCcc
Q 018022          346 RYMDKWSY  353 (362)
Q Consensus       346 ~~~~g~l~  353 (362)
                      ++++|.|-
T Consensus       168 ~i~~G~iG  175 (412)
T 4gqa_A          168 IIARGDIG  175 (412)
T ss_dssp             HHHHTTTC
T ss_pred             HHhcCCcC
Confidence            99998874

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.37  E-value=0.0096  Score=52.23  Aligned_cols=81  Identities=21%  Similarity=0.301  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-----cCCc-EEEcCCCCCCccHHHHHHhhc--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVT-EFVNSKNCGDKSVSQIIIDMT--DG  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~g~~-~vv~~~~~~~~~~~~~i~~~~--~~  271 (362)
                      .+.++||+|+ |.+|.+.++.+...|+ +|++++++.++.+.+.+     .+.. .++..+-.+.+++.+.+.+..  -+
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD   84 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4678999998 9999999999989999 99999998877654432     2432 222222101123333333322  13


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus        85 ~~d~vi~~Ag~   95 (248)
T 2pnf_A           85 GIDILVNNAGI   95 (248)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.36  E-value=0.0062  Score=55.74  Aligned_cols=94  Identities=13%  Similarity=0.007  Sum_probs=63.6

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHH-HHhcCCc--EEEcCCCCCCccHHHHHHhhcCCCccEEE
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGVT--EFVNSKNCGDKSVSQIIIDMTDGGADYCF  277 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~-~~~~g~~--~vv~~~~~~~~~~~~~i~~~~~~g~d~vi  277 (362)
                      .+.+++|+|+|++|.+++..+...|+.+|++++++.+|.+. +++++..  .+++        + +.+.+... .+|+||
T Consensus       140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~--------~-~~~~~~~~-~aDivI  209 (297)
T 2egg_A          140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFS--------L-AEAETRLA-EYDIII  209 (297)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEEC--------H-HHHHHTGG-GCSEEE
T ss_pred             CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceee--------H-HHHHhhhc-cCCEEE
Confidence            57899999999999999999999998899999999888654 4556542  2221        1 22333222 599999


Q ss_pred             EcCCCHHHH-----HHHHHHhccCCceEEEEcc
Q 018022          278 ECVGLASLV-----QEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       278 d~~g~~~~~-----~~~~~~l~~~~G~iv~~G~  305 (362)
                      +|++....-     ......++++ ..++.+..
T Consensus       210 n~t~~~~~~~~~~~~i~~~~l~~~-~~v~D~~y  241 (297)
T 2egg_A          210 NTTSVGMHPRVEVQPLSLERLRPG-VIVSDIIY  241 (297)
T ss_dssp             ECSCTTCSSCCSCCSSCCTTCCTT-CEEEECCC
T ss_pred             ECCCCCCCCCCCCCCCCHHHcCCC-CEEEEcCC
Confidence            999865410     0112346665 56667654

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.35  E-value=0.01  Score=52.62  Aligned_cols=81  Identities=27%  Similarity=0.354  Sum_probs=53.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCc-EEEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~d~  275 (362)
                      .+.++||+|+ |.+|.+.++.+...|+ +|++++++.++.+.+ ++++.. .++.-+-.+.+++.+.+.+...  +++|+
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   89 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   89 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            4678999998 9999999999999999 899999988766544 344433 2222221011233333333221  26999


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|.+.|.
T Consensus        90 li~~Ag~   96 (265)
T 2o23_A           90 AVNCAGI   96 (265)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999873

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=96.33  E-value=0.006  Score=54.71  Aligned_cols=75  Identities=20%  Similarity=0.249  Sum_probs=48.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcC--CCccEEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTD--GGADYCF  277 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~--~g~d~vi  277 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.....    ..|-.+  .....+.+.+...  +++|++|
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~----~~Dv~~--~~~~~~~~~~~~~~~g~iD~lv   99 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGA-RVAVADRAVAGIAADLHL----PGDLRE--AAYADGLPGAVAAGLGRLDIVV   99 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECSSCCTTSCCSEEC----CCCTTS--HHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHhhhcc----CcCCCC--HHHHHHHHHHHHHhcCCCCEEE
Confidence            4788999998 9999999999999999 999999876654322111    011111  1122222222211  2699999


Q ss_pred             EcCCC
Q 018022          278 ECVGL  282 (362)
Q Consensus       278 d~~g~  282 (362)
                      .+.|.
T Consensus       100 nnAg~  104 (266)
T 3uxy_A          100 NNAGV  104 (266)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99885

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.32  E-value=0.016  Score=51.23  Aligned_cols=102  Identities=16%  Similarity=0.216  Sum_probs=72.3

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc----EEEcCCCCCCccHHHHHHhh
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT----EFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~----~vv~~~~~~~~~~~~~i~~~  268 (362)
                      +.....++++.+||-+|+| .|..+..+++..+. +|++++.+++.++.+++....    .++..+-   .++     ..
T Consensus        47 ~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~---~~~-----~~  116 (266)
T 3ujc_A           47 ILSDIELNENSKVLDIGSG-LGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGNNKIIFEANDI---LTK-----EF  116 (266)
T ss_dssp             HTTTCCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSCTTEEEEECCT---TTC-----CC
T ss_pred             HHHhcCCCCCCEEEEECCC-CCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcCCCeEEEECcc---ccC-----CC
Confidence            4455678899999999997 58888888887787 999999999999998875421    2332221   111     11


Q ss_pred             cCCCccEEEEcCCC--------HHHHHHHHHHhccCCceEEEEcc
Q 018022          269 TDGGADYCFECVGL--------ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       269 ~~~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ..+.+|+|+....-        ...++.+.+.|+++ |++++...
T Consensus       117 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  160 (266)
T 3ujc_A          117 PENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPT-GTLLITDY  160 (266)
T ss_dssp             CTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCC-CEEEEEEe
Confidence            22379999986432        23467889999998 99988754

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=96.31  E-value=0.019  Score=51.24  Aligned_cols=79  Identities=15%  Similarity=0.270  Sum_probs=50.8

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHcCCCEEEEEcCCchH-HHHH-HhcCCc-EEE--cCCCCCCccHHHHHHhh---c
Q 018022          201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISEK-FEIG-KRFGVT-EFV--NSKNCGDKSVSQIIIDM---T  269 (362)
Q Consensus       201 ~g~~vlI~Ga---g~~G~~a~~la~~~g~~~vi~~~~~~~~-~~~~-~~~g~~-~vv--~~~~~~~~~~~~~i~~~---~  269 (362)
                      .+.++||+|+   |++|.+.++.+...|+ +|++++++.++ ++.+ ++++.. .++  |-.+  .+++.+.+.+.   .
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   82 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQN--EEHLASLAGRVTEAI   82 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhcCCCceEEEccCCC--HHHHHHHHHHHHHHh
Confidence            4678999984   8899999999999999 89999988765 2433 344432 122  3222  12233333322   2


Q ss_pred             C--CCccEEEEcCCC
Q 018022          270 D--GGADYCFECVGL  282 (362)
Q Consensus       270 ~--~g~d~vid~~g~  282 (362)
                      +  +++|++|.+.|.
T Consensus        83 g~~~~iD~lv~nAg~   97 (269)
T 2h7i_A           83 GAGNKLDGVVHSIGF   97 (269)
T ss_dssp             CTTCCEEEEEECCCC
T ss_pred             CCCCCceEEEECCcc
Confidence            2  169999999873

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=96.31  E-value=0.0075  Score=56.83  Aligned_cols=91  Identities=19%  Similarity=0.257  Sum_probs=61.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .|.+|.|+|.|.+|...++.++..|.++|++.+++..+.+.+.++|+..+        .++.+.+.     ..|+|+.++
T Consensus       163 ~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~--------~~l~ell~-----~aDvV~l~~  229 (364)
T 2j6i_A          163 EGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRV--------ENIEELVA-----QADIVTVNA  229 (364)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEEC--------SSHHHHHH-----TCSEEEECC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEec--------CCHHHHHh-----cCCEEEECC
Confidence            67899999999999999999999999339999988766666666664321        12333322     367777776


Q ss_pred             CCH----HHH-HHHHHHhccCCceEEEEcc
Q 018022          281 GLA----SLV-QEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       281 g~~----~~~-~~~~~~l~~~~G~iv~~G~  305 (362)
                      +..    ..+ ...+..|+++ +.++.++.
T Consensus       230 P~t~~t~~li~~~~l~~mk~g-a~lIn~ar  258 (364)
T 2j6i_A          230 PLHAGTKGLINKELLSKFKKG-AWLVNTAR  258 (364)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred             CCChHHHHHhCHHHHhhCCCC-CEEEECCC
Confidence            653    112 2355666665 66666553

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.30  E-value=0.014  Score=54.39  Aligned_cols=88  Identities=31%  Similarity=0.471  Sum_probs=63.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++.++ +.+.+.|+..         .++.+.+.     ..|+|+.++
T Consensus       164 ~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~---------~~l~ell~-----~aDvV~l~~  227 (335)
T 2g76_A          164 NGKTLGILGLGRIGREVATRMQSFGM-KTIGYDPIISP-EVSASFGVQQ---------LPLEEIWP-----LCDFITVHT  227 (335)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSCH-HHHHHTTCEE---------CCHHHHGG-----GCSEEEECC
T ss_pred             CcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCcee---------CCHHHHHh-----cCCEEEEec
Confidence            57899999999999999999999999 99999987766 3566677642         11222221     478888877


Q ss_pred             CCHH----HH-HHHHHHhccCCceEEEEcc
Q 018022          281 GLAS----LV-QEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       281 g~~~----~~-~~~~~~l~~~~G~iv~~G~  305 (362)
                      +...    .+ ...+..|+++ +.++.+|.
T Consensus       228 P~t~~t~~li~~~~l~~mk~g-ailIN~ar  256 (335)
T 2g76_A          228 PLLPSTTGLLNDNTFAQCKKG-VRVVNCAR  256 (335)
T ss_dssp             CCCTTTTTSBCHHHHTTSCTT-EEEEECSC
T ss_pred             CCCHHHHHhhCHHHHhhCCCC-cEEEECCC
Confidence            7542    12 3566778886 77777765

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.29  E-value=0.01  Score=49.61  Aligned_cols=100  Identities=15%  Similarity=0.185  Sum_probs=67.5

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc--EEEcCCCCCCccHHHHHHhh
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~--~vv~~~~~~~~~~~~~i~~~  268 (362)
                      ....++++++||=+|+|. |..+..+++. +. +|++++.+++.++.+++    .+.+  .++....   .+    +.+.
T Consensus        16 l~~~~~~~~~vLDiGcG~-G~~~~~la~~-~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~---~~----l~~~   85 (185)
T 3mti_A           16 LAEVLDDESIVVDATMGN-GNDTAFLAGL-SK-KVYAFDVQEQALGKTSQRLSDLGIENTELILDGH---EN----LDHY   85 (185)
T ss_dssp             HHTTCCTTCEEEESCCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCG---GG----GGGT
T ss_pred             HHHhCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcH---HH----HHhh
Confidence            345678999999999876 7777788877 66 99999999988877754    3432  2333111   11    1122


Q ss_pred             cCCCccEEEEcCCC-----------H----HHHHHHHHHhccCCceEEEEcc
Q 018022          269 TDGGADYCFECVGL-----------A----SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       269 ~~~g~d~vid~~g~-----------~----~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      .++.||+|+-..+-           .    ..+..+.+.|+++ |+++++..
T Consensus        86 ~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~  136 (185)
T 3mti_A           86 VREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVG-GRLAIMIY  136 (185)
T ss_dssp             CCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             ccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            33479999866321           1    3357888999998 99987754

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.28  E-value=0.023  Score=51.10  Aligned_cols=99  Identities=11%  Similarity=0.141  Sum_probs=70.3

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc----CCc---EEEcCCCCCCccHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVT---EFVNSKNCGDKSVSQII  265 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~----g~~---~vv~~~~~~~~~~~~~i  265 (362)
                      +....+++++.+||-+|+|. |..+..+++..|. +|++++.+++.++.+++.    |..   .++..+      +    
T Consensus        56 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d------~----  123 (287)
T 1kpg_A           56 ALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAG------W----  123 (287)
T ss_dssp             HHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESC------G----
T ss_pred             HHHHcCCCCcCEEEEECCcc-cHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECC------h----
Confidence            44566788999999999876 7778888877788 999999999988877652    321   222221      1    


Q ss_pred             HhhcCCCccEEEEc-----CC---CHHHHHHHHHHhccCCceEEEEcc
Q 018022          266 IDMTDGGADYCFEC-----VG---LASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       266 ~~~~~~g~d~vid~-----~g---~~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      .++. +.+|+|+..     ++   -...++.+.+.|+++ |++++...
T Consensus       124 ~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  169 (287)
T 1kpg_A          124 EQFD-EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHTI  169 (287)
T ss_dssp             GGCC-CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred             hhCC-CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCC-CEEEEEEe
Confidence            1122 479999875     22   135578899999998 99887643

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.28  E-value=0.029  Score=50.47  Aligned_cols=103  Identities=13%  Similarity=0.109  Sum_probs=67.7

Q ss_pred             hhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHH
Q 018022          186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQII  265 (362)
Q Consensus       186 ~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i  265 (362)
                      ..|-+.++.....-..+.+++|+|+|++|.+++..+...|. +|+++.|+.+|.+.+.+++.. ++.+++     +    
T Consensus       102 ~NTD~~Gf~~~L~~~~~k~vlvlGaGGaaraia~~L~~~G~-~v~V~nRt~~ka~~la~~~~~-~~~~~~-----l----  170 (269)
T 3phh_A          102 YNTDALGFYLSLKQKNYQNALILGAGGSAKALACELKKQGL-QVSVLNRSSRGLDFFQRLGCD-CFMEPP-----K----  170 (269)
T ss_dssp             ECCHHHHHHHHCC---CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCTTHHHHHHHTCE-EESSCC-----S----
T ss_pred             ecChHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCe-EecHHH-----h----
Confidence            34444443333321228899999999999999999999994 999999999988766577743 344332     1    


Q ss_pred             HhhcCCCccEEEEcCCCHH----HH--HHHHHHhccCCceEEEEcc
Q 018022          266 IDMTDGGADYCFECVGLAS----LV--QEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       266 ~~~~~~g~d~vid~~g~~~----~~--~~~~~~l~~~~G~iv~~G~  305 (362)
                         .  .+|+||+|++...    .+  ..+...++++ ..++.+--
T Consensus       171 ---~--~~DiVInaTp~Gm~~~~~l~~~~l~~~l~~~-~~v~D~vY  210 (269)
T 3phh_A          171 ---S--AFDLIINATSASLHNELPLNKEVLKGYFKEG-KLAYDLAY  210 (269)
T ss_dssp             ---S--CCSEEEECCTTCCCCSCSSCHHHHHHHHHHC-SEEEESCC
T ss_pred             ---c--cCCEEEEcccCCCCCCCCCChHHHHhhCCCC-CEEEEeCC
Confidence               1  5899999987531    12  1222357775 66666653

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=96.27  E-value=0.018  Score=50.41  Aligned_cols=80  Identities=18%  Similarity=0.216  Sum_probs=49.9

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEE-EcCCchHHHHHH----hcCCcE-EEcCCCCCCccHHHHHHhhc--CCC
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIG-VDVISEKFEIGK----RFGVTE-FVNSKNCGDKSVSQIIIDMT--DGG  272 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~-~~~~~~~~~~~~----~~g~~~-vv~~~~~~~~~~~~~i~~~~--~~g  272 (362)
                      |.++||+|+ |.+|.+.++.+...|+ +|++ .+++.++.+.+.    +.+... .+.-+-.+.+++.+.+.+..  -++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            467999998 9999999999999999 7777 578776655432    234321 22211101123333333322  136


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        80 id~li~~Ag~   89 (244)
T 1edo_A           80 IDVVVNNAGI   89 (244)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=96.27  E-value=0.038  Score=51.57  Aligned_cols=131  Identities=11%  Similarity=0.021  Sum_probs=83.7

Q ss_pred             CEEEEECCChHHH-HHHHHHHHc-CCCEEEEEcCCchHHHH-HHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          203 STVVIFGLGSIGL-AVAEGARLC-GATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       203 ~~vlI~Gag~~G~-~a~~la~~~-g~~~vi~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      -+|.|+|+|.+|. ..+..++.. +++.+.+.+++.++.+. ++++|+..+        .++.+.+.   ...+|+|+.|
T Consensus        28 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~--------~~~~~ll~---~~~~D~V~i~   96 (350)
T 3rc1_A           28 IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPV--------EGYPALLE---RDDVDAVYVP   96 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEE--------ESHHHHHT---CTTCSEEEEC
T ss_pred             eEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCc--------CCHHHHhc---CCCCCEEEEC
Confidence            4789999999998 566666655 67344466777777655 456787653        12333332   1269999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH------HH-HhcCcEEEEeeccCCCccccHHHHHHHHHcCCc
Q 018022          280 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF------EV-LHSGKILMGSLFGGLKAKSDIPILLKRYMDKWS  352 (362)
Q Consensus       280 ~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~------~~-~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l  352 (362)
                      +......+.+..++..  |+-+++-..     +..+..      .+ ..+++.+.-.+...+  ...+..+.+++++|+|
T Consensus        97 tp~~~h~~~~~~al~a--Gk~Vl~EKP-----~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~--~p~~~~~k~~i~~G~i  167 (350)
T 3rc1_A           97 LPAVLHAEWIDRALRA--GKHVLAEKP-----LTTDRPQAERLFAVARERGLLLMENFMFLH--HPQHRQVADMLDEGVI  167 (350)
T ss_dssp             CCGGGHHHHHHHHHHT--TCEEEEESS-----SCSSHHHHHHHHHHHHHTTCCEEEECGGGG--CTHHHHHHHHHHTTTT
T ss_pred             CCcHHHHHHHHHHHHC--CCcEEEeCC-----CCCCHHHHHHHHHHHHHhCCEEEEEecccC--CHHHHHHHHHHhcCCC
Confidence            9988878888888887  566777542     222222      22 234555543332222  3668888899999877


Q ss_pred             c
Q 018022          353 Y  353 (362)
Q Consensus       353 ~  353 (362)
                      -
T Consensus       168 G  168 (350)
T 3rc1_A          168 G  168 (350)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=96.27  E-value=0.014  Score=54.77  Aligned_cols=88  Identities=19%  Similarity=0.188  Sum_probs=64.9

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++. +.+.+.+.|+..+        .++.+.+.+     .|+|+-++
T Consensus       159 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~~~~~g~~~~--------~~l~ell~~-----aDiV~l~~  223 (352)
T 3gg9_A          159 KGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWGREN-SKERARADGFAVA--------ESKDALFEQ-----SDVLSVHL  223 (352)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSHH-HHHHHHHTTCEEC--------SSHHHHHHH-----CSEEEECC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEECCCC-CHHHHHhcCceEe--------CCHHHHHhh-----CCEEEEec
Confidence            47799999999999999999999999 999999875 4455666776421        234444443     78999888


Q ss_pred             CCHH----HH-HHHHHHhccCCceEEEEc
Q 018022          281 GLAS----LV-QEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       281 g~~~----~~-~~~~~~l~~~~G~iv~~G  304 (362)
                      +...    .+ ...+..|+++ ..++.+|
T Consensus       224 Plt~~t~~li~~~~l~~mk~g-ailIN~a  251 (352)
T 3gg9_A          224 RLNDETRSIITVADLTRMKPT-ALFVNTS  251 (352)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTT-CEEEECS
T ss_pred             cCcHHHHHhhCHHHHhhCCCC-cEEEECC
Confidence            7432    11 3667788887 8888887

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=96.26  E-value=0.013  Score=49.50  Aligned_cols=97  Identities=15%  Similarity=0.127  Sum_probs=61.3

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      .+|+|+|+ |.+|...++.+...|. +|++++++.++.+.+...+. +++..+-   .+ .+.+.+... ++|+||.+.|
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~---~~-~~~~~~~~~-~~d~vi~~a~   76 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPA-HVVVGDV---LQ-AADVDKTVA-GQDAVIVLLG   76 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCS-EEEESCT---TS-HHHHHHHHT-TCSEEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeChhhcccccCCce-EEEEecC---CC-HHHHHHHHc-CCCEEEECcc
Confidence            58999998 9999999999998998 99999998776533212222 2332221   11 233333333 5899999998


Q ss_pred             CHH----------HHHHHHHHhccC-CceEEEEccC
Q 018022          282 LAS----------LVQEAYACCRKG-WGKTIVLGVD  306 (362)
Q Consensus       282 ~~~----------~~~~~~~~l~~~-~G~iv~~G~~  306 (362)
                      ...          ....+++.++.. -++++.++..
T Consensus        77 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~  112 (206)
T 1hdo_A           77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA  112 (206)
T ss_dssp             CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             CCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence            532          133444444442 1588888653

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=96.25  E-value=0.021  Score=50.75  Aligned_cols=80  Identities=16%  Similarity=0.164  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-h---cCCc-EEEcCCCCCCccHHHHHHhhc---CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-R---FGVT-EFVNSKNCGDKSVSQIIIDMT---DG  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~---~g~~-~vv~~~~~~~~~~~~~i~~~~---~~  271 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+. +   .+.. ..+.-+-.+.+++.+.+.+..   .+
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4678999998 9999999999999999 9999999887765432 2   2432 222211101123333333331   34


Q ss_pred             CccEEEEcCC
Q 018022          272 GADYCFECVG  281 (362)
Q Consensus       272 g~d~vid~~g  281 (362)
                      .+|++|++.|
T Consensus        83 ~id~lvnnAg   92 (260)
T 2qq5_A           83 RLDVLVNNAY   92 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CceEEEECCc
Confidence            7999999994

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.25  E-value=0.012  Score=54.30  Aligned_cols=76  Identities=16%  Similarity=0.222  Sum_probs=52.6

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC---chHHHHHH-hc----CC-cEEEcCCCCCCccHHHHHHhhcCC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI---SEKFEIGK-RF----GV-TEFVNSKNCGDKSVSQIIIDMTDG  271 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~---~~~~~~~~-~~----g~-~~vv~~~~~~~~~~~~~i~~~~~~  271 (362)
                      .+.++||+|+|++|.+++..+...|+++|+++.|+   .+|.+.+. ++    +. ..+++.++  .+++.+.+.     
T Consensus       153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~--~~~l~~~l~-----  225 (315)
T 3tnl_A          153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIED--HEQLRKEIA-----  225 (315)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC--HHHHHHHHH-----
T ss_pred             cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccch--HHHHHhhhc-----
Confidence            57899999999999999999999999889999998   66655432 22    32 23444433  012222222     


Q ss_pred             CccEEEEcCCCH
Q 018022          272 GADYCFECVGLA  283 (362)
Q Consensus       272 g~d~vid~~g~~  283 (362)
                      .+|+||+|++..
T Consensus       226 ~aDiIINaTp~G  237 (315)
T 3tnl_A          226 ESVIFTNATGVG  237 (315)
T ss_dssp             TCSEEEECSSTT
T ss_pred             CCCEEEECccCC
Confidence            489999998743

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.25  E-value=0.016  Score=52.61  Aligned_cols=81  Identities=11%  Similarity=0.128  Sum_probs=52.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hc----CCc-EEEcCCCCCCccHHHHHHhhc--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF----GVT-EFVNSKNCGDKSVSQIIIDMT--DG  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~----g~~-~vv~~~~~~~~~~~~~i~~~~--~~  271 (362)
                      .+.++||+|+ |++|.+.+..+...|+ +|++++++.++.+.+. ++    +.. .++.-+-.+.+++.+.+.+..  .+
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  103 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence            4678999998 9999999999999999 8999999887765432 22    432 222222101133333333321  23


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      .+|++|.+.|.
T Consensus       104 ~id~li~~Ag~  114 (302)
T 1w6u_A          104 HPNIVINNAAG  114 (302)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            68999999983

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=96.24  E-value=0.042  Score=51.07  Aligned_cols=136  Identities=9%  Similarity=-0.020  Sum_probs=85.8

Q ss_pred             EEEEECCChHHHH-HHHHHHH-cCCCEEEEEcCCchHHHH-HHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          204 TVVIFGLGSIGLA-VAEGARL-CGATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       204 ~vlI~Gag~~G~~-a~~la~~-~g~~~vi~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      ++.|+|+|.+|.. ++...+. -+++-+-+.+++.++.+. ++++|...++.       ++.+.+.+   ..+|+|+.|+
T Consensus        25 rigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~-------d~~ell~~---~~iDaV~I~t   94 (350)
T 4had_A           25 RFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFG-------SYEEMLAS---DVIDAVYIPL   94 (350)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEES-------SHHHHHHC---SSCSEEEECS
T ss_pred             EEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeC-------CHHHHhcC---CCCCEEEEeC
Confidence            6899999999975 3555554 467334456777777654 56789876652       34444432   3699999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEccCCCCCcccc-CHHHH-HhcCcEEEEeeccCCCccccHHHHHHHHHcCCcc
Q 018022          281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSL-SSFEV-LHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSY  353 (362)
Q Consensus       281 g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~-~~~~~-~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~  353 (362)
                      +.....+.+..+++.  |+-|++-.+........ .+..+ -.++..+.-.+...+  ...+.++.+++++|+|-
T Consensus        95 P~~~H~~~~~~al~a--GkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~~~R~--~p~~~~~k~~i~~G~iG  165 (350)
T 4had_A           95 PTSQHIEWSIKAADA--GKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAYMITY--SPVWQKVRSLIDEGAIG  165 (350)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECCGGGG--SHHHHHHHHHHHTTTTS
T ss_pred             CCchhHHHHHHHHhc--CCEEEEeCCcccchhhHHHHHHHHHHcCCceeEeeeeec--CHHHHHhhHhhhcCCCC
Confidence            998778899999988  68888855321111111 11122 224555443333322  36688888999998873

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.24  E-value=0.05  Score=49.74  Aligned_cols=89  Identities=16%  Similarity=0.054  Sum_probs=65.3

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      ..+|.|+|.|.+|...++.+...|+ +|++.++++++.+.+.+.|...   .     .+..+.+.+     .|+||.++.
T Consensus         9 ~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~---~-----~~~~e~~~~-----aDvVi~~vp   74 (306)
T 3l6d_A            9 EFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSPGKAAALVAAGAHL---C-----ESVKAALSA-----SPATIFVLL   74 (306)
T ss_dssp             SCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTCEE---C-----SSHHHHHHH-----SSEEEECCS
T ss_pred             CCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCee---c-----CCHHHHHhc-----CCEEEEEeC
Confidence            3579999999999999999889999 8999999999998888777532   1     234444443     799999999


Q ss_pred             CHHHHHHHH-----HHhccCCceEEEEcc
Q 018022          282 LASLVQEAY-----ACCRKGWGKTIVLGV  305 (362)
Q Consensus       282 ~~~~~~~~~-----~~l~~~~G~iv~~G~  305 (362)
                      .+..+...+     ..+.++ ..++.++.
T Consensus        75 ~~~~~~~v~~~~~l~~~~~g-~ivid~st  102 (306)
T 3l6d_A           75 DNHATHEVLGMPGVARALAH-RTIVDYTT  102 (306)
T ss_dssp             SHHHHHHHHTSTTHHHHTTT-CEEEECCC
T ss_pred             CHHHHHHHhcccchhhccCC-CEEEECCC
Confidence            876455444     235554 55666654

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=96.24  E-value=0.02  Score=49.35  Aligned_cols=96  Identities=18%  Similarity=0.212  Sum_probs=62.5

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      .+|||+|+ |.+|...++.+...|. +|++++++.++.+.+. -+ ..++..+-   .+ .+.+.+... ++|+||.++|
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~-~~~~~~Dl---~d-~~~~~~~~~-~~d~vi~~a~   76 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIEN-EH-LKVKKADV---SS-LDEVCEVCK-GADAVISAFN   76 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCCC-TT-EEEECCCT---TC-HHHHHHHHT-TCSEEEECCC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhcc-Cc-eEEEEecC---CC-HHHHHHHhc-CCCEEEEeCc
Confidence            57999998 9999999999999998 9999999887653321 11 22332221   11 233444333 5999999998


Q ss_pred             CH-----------HHHHHHHHHhccCC-ceEEEEccC
Q 018022          282 LA-----------SLVQEAYACCRKGW-GKTIVLGVD  306 (362)
Q Consensus       282 ~~-----------~~~~~~~~~l~~~~-G~iv~~G~~  306 (362)
                      ..           .....+++.++..+ .+++.++..
T Consensus        77 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  113 (227)
T 3dhn_A           77 PGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGA  113 (227)
T ss_dssp             C------CCSHHHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCCh
Confidence            64           12345566666541 388888753

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=96.22  E-value=0.031  Score=49.15  Aligned_cols=81  Identities=20%  Similarity=0.229  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcC-CchHHHHH----HhcCCcE-EEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIG----KRFGVTE-FVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~-~~~~~~~~----~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|+++++ +.++.+.+    ++.+... .+.-+-.+.+++.+.+.+...  +
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGY-NVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3578999988 9999999999999999 7877765 44554433    3344432 222221011233333333221  2


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus        82 ~id~lv~nAg~   92 (246)
T 3osu_A           82 SLDVLVNNAGI   92 (246)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999884

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=96.21  E-value=0.015  Score=52.09  Aligned_cols=81  Identities=15%  Similarity=0.027  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcC-CchHHHHHH-hc----CCc-EEEcCCCCCC----ccHHHHHHhh
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIGK-RF----GVT-EFVNSKNCGD----KSVSQIIIDM  268 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~-~~~~~~~~~-~~----g~~-~vv~~~~~~~----~~~~~~i~~~  268 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|+++++ +.++.+.+. ++    +.. .++.-+-.+.    +.+.+.+.+.
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   88 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS   88 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence            4678999998 9999999999999999 9999998 777655432 22    432 2222211112    2222233222


Q ss_pred             cC--CCccEEEEcCCC
Q 018022          269 TD--GGADYCFECVGL  282 (362)
Q Consensus       269 ~~--~g~d~vid~~g~  282 (362)
                      ..  +++|++|.+.|.
T Consensus        89 ~~~~g~id~lv~nAg~  104 (276)
T 1mxh_A           89 FRAFGRCDVLVNNASA  104 (276)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHhcCCCCEEEECCCC
Confidence            11  269999999884

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.21  E-value=0.02  Score=51.72  Aligned_cols=87  Identities=16%  Similarity=0.134  Sum_probs=61.9

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCH
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  283 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~  283 (362)
                      +|.|+|.|.+|...++.+...|+ +|++.++++++.+.+.+.|....        .+..+.+.     ..|+||.|+..+
T Consensus         3 ~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~~~~~-----~advvi~~v~~~   68 (287)
T 3pdu_A            3 TYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVALGARQA--------SSPAEVCA-----ACDITIAMLADP   68 (287)
T ss_dssp             CEEEECCSTTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHHTCEEC--------SCHHHHHH-----HCSEEEECCSSH
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec--------CCHHHHHH-----cCCEEEEEcCCH
Confidence            58899999999998888888898 89999999999988887775321        23344443     378999999887


Q ss_pred             HHHHHHH-------HHhccCCceEEEEcc
Q 018022          284 SLVQEAY-------ACCRKGWGKTIVLGV  305 (362)
Q Consensus       284 ~~~~~~~-------~~l~~~~G~iv~~G~  305 (362)
                      ..+...+       ..++++ ..++.++.
T Consensus        69 ~~~~~v~~~~~~l~~~l~~g-~~vv~~st   96 (287)
T 3pdu_A           69 AAAREVCFGANGVLEGIGGG-RGYIDMST   96 (287)
T ss_dssp             HHHHHHHHSTTCGGGTCCTT-CEEEECSC
T ss_pred             HHHHHHHcCchhhhhcccCC-CEEEECCC
Confidence            4455554       334554 44555543

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=96.19  E-value=0.038  Score=51.56  Aligned_cols=131  Identities=13%  Similarity=0.067  Sum_probs=85.5

Q ss_pred             CEEEEECCChHHHHHHHHHHHc--CCCEEEEEcCCchHHHH-HHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          203 STVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~--g~~~vi~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      -+|.|+|+|.+|...+...+..  +++.+.+.+++.++.+. ++++|+ .++       .++.+.+.+   ..+|+|+.|
T Consensus        14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~-~~~-------~~~~~ll~~---~~~D~V~i~   82 (354)
T 3q2i_A           14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RGH-------ASLTDMLAQ---TDADIVILT   82 (354)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC-EEE-------SCHHHHHHH---CCCSEEEEC
T ss_pred             ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC-cee-------CCHHHHhcC---CCCCEEEEC
Confidence            4789999999998877777765  67344467888887665 456786 333       234444443   269999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH------H-HHhcCcEEEEeeccCCCccccHHHHHHHHHcCCc
Q 018022          280 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF------E-VLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWS  352 (362)
Q Consensus       280 ~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~------~-~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l  352 (362)
                      +......+.+..++..  |+-+++...     +..+..      . ...++..+.-.+...+  ...+..+.+++++|+|
T Consensus        83 tp~~~h~~~~~~al~~--gk~v~~EKP-----~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~--~p~~~~~k~~i~~g~i  153 (354)
T 3q2i_A           83 TPSGLHPTQSIECSEA--GFHVMTEKP-----MATRWEDGLEMVKAADKAKKHLFVVKQNRR--NATLQLLKRAMQEKRF  153 (354)
T ss_dssp             SCGGGHHHHHHHHHHT--TCEEEECSS-----SCSSHHHHHHHHHHHHHHTCCEEECCGGGG--SHHHHHHHHHHHTTTT
T ss_pred             CCcHHHHHHHHHHHHC--CCCEEEeCC-----CcCCHHHHHHHHHHHHHhCCeEEEEEcccC--CHHHHHHHHHHhcCCC
Confidence            9988778888888887  577777542     222222      2 2233555533222222  3568888999999886


Q ss_pred             c
Q 018022          353 Y  353 (362)
Q Consensus       353 ~  353 (362)
                      -
T Consensus       154 G  154 (354)
T 3q2i_A          154 G  154 (354)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=96.19  E-value=0.026  Score=52.05  Aligned_cols=131  Identities=14%  Similarity=0.093  Sum_probs=80.4

Q ss_pred             EEEEECCChHHHHH-HHHHHHcCCCEEEEEcCCchHHHH-HHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          204 TVVIFGLGSIGLAV-AEGARLCGATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       204 ~vlI~Gag~~G~~a-~~la~~~g~~~vi~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      +|.|+|+|.+|... +..++..+++.+.+.+++.++.+. ++++|...++       .++.+.+.   ...+|+|+.++.
T Consensus         2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~-------~~~~~~l~---~~~~D~V~i~tp   71 (332)
T 2glx_A            2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSV-------TSVEELVG---DPDVDAVYVSTT   71 (332)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCB-------SCHHHHHT---CTTCCEEEECSC
T ss_pred             eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCccc-------CCHHHHhc---CCCCCEEEEeCC
Confidence            58899999999876 544333777444467888877755 4567754221       23333332   126999999999


Q ss_pred             CHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH------HH-HhcCcEEEEeeccCCCccccHHHHHHHHHcCCcc
Q 018022          282 LASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF------EV-LHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSY  353 (362)
Q Consensus       282 ~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~------~~-~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~  353 (362)
                      .....+.+..+++.  |+-+++..     ++..+..      .+ ..+++.+.-.+...+  ...+..+.+++++|+|-
T Consensus        72 ~~~h~~~~~~al~~--Gk~v~~ek-----P~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~--~p~~~~~~~~i~~g~iG  141 (332)
T 2glx_A           72 NELHREQTLAAIRA--GKHVLCEK-----PLAMTLEDAREMVVAAREAGVVLGTNHHLRN--AAAHRAMRDAIAEGRIG  141 (332)
T ss_dssp             GGGHHHHHHHHHHT--TCEEEECS-----SSCSSHHHHHHHHHHHHHHTCCEEECCCGGG--SHHHHHHHHHHHTTTTS
T ss_pred             hhHhHHHHHHHHHC--CCeEEEeC-----CCcCCHHHHHHHHHHHHHcCCEEEEeehhhc--CHHHHHHHHHHHcCCCC
Confidence            88767888888887  56666643     2222222      22 224555543322222  35578888999988763

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=96.19  E-value=0.023  Score=50.16  Aligned_cols=94  Identities=21%  Similarity=0.378  Sum_probs=57.4

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      .++||+|+ |++|.+.++.+...|+ +|++++++.++.+.  .+..    |-.+  .+.+.+.+.+ ..+++|++|.+.|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~--~~~~----Dl~~--~~~v~~~~~~-~~~~id~lv~~Ag   71 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDAEVIA--DLST----AEGR--KQAIADVLAK-CSKGMDGLVLCAG   71 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC--CTTS----HHHH--HHHHHHHHTT-CTTCCSEEEECCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhhcc--cccc----CCCC--HHHHHHHHHH-hCCCCCEEEECCC
Confidence            36899998 9999999999999999 89999987754321  0000    0000  0111122221 2236899999988


Q ss_pred             CHH------------------HHHHHHHHhccC-CceEEEEccC
Q 018022          282 LAS------------------LVQEAYACCRKG-WGKTIVLGVD  306 (362)
Q Consensus       282 ~~~------------------~~~~~~~~l~~~-~G~iv~~G~~  306 (362)
                      ...                  ..+.++..|+.. .|+|+.++..
T Consensus        72 ~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~  115 (257)
T 1fjh_A           72 LGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSV  115 (257)
T ss_dssp             CCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred             CCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECCh
Confidence            532                  234455555432 2799999764

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=96.18  E-value=0.011  Score=54.75  Aligned_cols=80  Identities=21%  Similarity=0.161  Sum_probs=47.5

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHH----HHHHhc------CCc-EEEcCCCCCCccHHHHHHhhc
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKF----EIGKRF------GVT-EFVNSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~----~~~~~~------g~~-~vv~~~~~~~~~~~~~i~~~~  269 (362)
                      +.++||+|+ |++|.+.+..+...|+ +|+.+.++.++.    +.++..      +.. .++..+-.+.+++.+.+.+..
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~-~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPS-QSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTT-CCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-ceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            567899998 9999999999999998 666665443322    222222      122 233222101233444444443


Q ss_pred             CCCccEEEEcCCC
Q 018022          270 DGGADYCFECVGL  282 (362)
Q Consensus       270 ~~g~d~vid~~g~  282 (362)
                      .+.+|++|++.|.
T Consensus        81 ~g~iD~lVnnAG~   93 (327)
T 1jtv_A           81 EGRVDVLVCNAGL   93 (327)
T ss_dssp             TSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            3479999999874

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=96.17  E-value=0.011  Score=55.05  Aligned_cols=46  Identities=28%  Similarity=0.413  Sum_probs=39.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV  247 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~  247 (362)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++..+.+.+.++|+
T Consensus       144 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~  189 (330)
T 4e5n_A          144 DNATVGFLGMGAIGLAMADRLQGWGA-TLQYHEAKALDTQTEQRLGL  189 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHTTTSCC-EEEEECSSCCCHHHHHHHTE
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCCCcHhHHHhcCc
Confidence            47899999999999999999999999 99999998755555655664

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=96.17  E-value=0.016  Score=50.87  Aligned_cols=80  Identities=20%  Similarity=0.275  Sum_probs=51.7

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hc----CCc-EEEcCCCCCCccHHHHHHhhcC--CC
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF----GVT-EFVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~----g~~-~vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      +.++||+|+ |.+|.+.+..+...|+ +|++++++.++.+.+. ++    +.. .++..+-.+.+++.+.+.+...  ++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            468999998 9999999999999999 8999999887766543 22    322 2222221011233333333221  26


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        81 id~li~~Ag~   90 (250)
T 2cfc_A           81 IDVLVNNAGI   90 (250)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=96.17  E-value=0.02  Score=53.55  Aligned_cols=90  Identities=21%  Similarity=0.302  Sum_probs=59.1

Q ss_pred             CCCCEEEEECCChHHHHHHHHHH-HcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~-~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      -.|.+|.|+|.|.+|...++.++ ..|. +|++.+++.++.+.+.++|...+        .++.+.+.     ..|+|+.
T Consensus       161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~~~~~~~~~~~~g~~~~--------~~l~ell~-----~aDvVil  226 (348)
T 2w2k_A          161 PRGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDVAPADAETEKALGAERV--------DSLEELAR-----RSDCVSV  226 (348)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHTCEEC--------SSHHHHHH-----HCSEEEE
T ss_pred             CCCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECCCCcchhhHhhcCcEEe--------CCHHHHhc-----cCCEEEE
Confidence            35789999999999999999999 9999 99999998776666665564321        12222232     2567777


Q ss_pred             cCCCHH----HH-HHHHHHhccCCceEEEEc
Q 018022          279 CVGLAS----LV-QEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       279 ~~g~~~----~~-~~~~~~l~~~~G~iv~~G  304 (362)
                      ++....    .+ ...+..|+++ ..++.++
T Consensus       227 ~vp~~~~t~~li~~~~l~~mk~g-ailin~s  256 (348)
T 2w2k_A          227 SVPYMKLTHHLIDEAFFAAMKPG-SRIVNTA  256 (348)
T ss_dssp             CCCCSGGGTTCBCHHHHHHSCTT-EEEEECS
T ss_pred             eCCCChHHHHHhhHHHHhcCCCC-CEEEECC
Confidence            665431    11 2345556664 5555554

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.17  E-value=0.036  Score=50.99  Aligned_cols=91  Identities=20%  Similarity=0.247  Sum_probs=65.0

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCC-EEEEEcCCchHHHHHHhcCCc-EEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .+|.|+|.|.+|.+.++.++..|.. +|++.++++++.+.+.+.|.. .......    ++  .+     ...|+||.|+
T Consensus        34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~----~~--~~-----~~aDvVilav  102 (314)
T 3ggo_A           34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIA----KV--ED-----FSPDFVMLSS  102 (314)
T ss_dssp             SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTT----GG--GG-----GCCSEEEECS
T ss_pred             CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHH----HH--hh-----ccCCEEEEeC
Confidence            5899999999999999999988874 899999999999999988863 3332111    10  11     1589999999


Q ss_pred             CCHH---HHHHHHHHhccCCceEEEEcc
Q 018022          281 GLAS---LVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       281 g~~~---~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ....   .+.++...++++ ..++.++.
T Consensus       103 p~~~~~~vl~~l~~~l~~~-~iv~d~~S  129 (314)
T 3ggo_A          103 PVRTFREIAKKLSYILSED-ATVTDQGS  129 (314)
T ss_dssp             CGGGHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred             CHHHHHHHHHHHhhccCCC-cEEEECCC
Confidence            8764   234555566775 55656654

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=96.16  E-value=0.041  Score=50.84  Aligned_cols=76  Identities=21%  Similarity=0.250  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCch----HHHHHHhc------CCcEEEcCCCCCCccHHHHHHhhc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE----KFEIGKRF------GVTEFVNSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~----~~~~~~~~------g~~~vv~~~~~~~~~~~~~i~~~~  269 (362)
                      .+.+|||+|+ |.+|...++.+...|+ +|++++++..    ..+.+...      .--+++..+-   .+ .+.+.++.
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~d-~~~~~~~~   98 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI---RD-LTTCEQVM   98 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCT---TC-HHHHHHHT
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccC---CC-HHHHHHHh
Confidence            3579999998 9999999999999998 9999988543    33333332      2223333222   11 23444444


Q ss_pred             CCCccEEEEcCCC
Q 018022          270 DGGADYCFECVGL  282 (362)
Q Consensus       270 ~~g~d~vid~~g~  282 (362)
                      . ++|+||.+++.
T Consensus        99 ~-~~d~Vih~A~~  110 (351)
T 3ruf_A           99 K-GVDHVLHQAAL  110 (351)
T ss_dssp             T-TCSEEEECCCC
T ss_pred             c-CCCEEEECCcc
Confidence            3 69999999985

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=96.16  E-value=0.019  Score=52.19  Aligned_cols=80  Identities=14%  Similarity=0.201  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh---------cCCc-EEEcCCCCCCccHHHHHHhhc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---------FGVT-EFVNSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~---------~g~~-~vv~~~~~~~~~~~~~i~~~~  269 (362)
                      .+.++||+|+ |.+|.+.++.+...|+ +|++++++.++.+.+.+         .+.. .++..+-.+.+.+.+.+.+..
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   95 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   95 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence            4678999998 9999999999999999 89999998877654321         1222 222221101123333333322


Q ss_pred             C--CCccEEEEcCC
Q 018022          270 D--GGADYCFECVG  281 (362)
Q Consensus       270 ~--~g~d~vid~~g  281 (362)
                      .  +++|++|.+.|
T Consensus        96 ~~~g~id~li~~Ag  109 (303)
T 1yxm_A           96 DTFGKINFLVNNGG  109 (303)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HHcCCCCEEEECCC
Confidence            1  26999999998

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.16  E-value=0.0048  Score=56.90  Aligned_cols=101  Identities=24%  Similarity=0.321  Sum_probs=70.6

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHh----cCCc--EEEcCCCCCCccHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQII  265 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~g~~--~vv~~~~~~~~~~~~~i  265 (362)
                      +.....++++++||-+|+|. |..+..+++..+. .+|++++.+++.++.+++    .|..  .++..+      ..+..
T Consensus        67 l~~~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d------~~~~~  139 (317)
T 1dl5_A           67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGD------GYYGV  139 (317)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC------GGGCC
T ss_pred             HHHhcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECC------hhhcc
Confidence            45667889999999999977 7788888887542 379999999998887765    3443  222222      11101


Q ss_pred             HhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 018022          266 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       266 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  303 (362)
                      .  ..+.||+|+...........+.+.|+++ |++++.
T Consensus       140 ~--~~~~fD~Iv~~~~~~~~~~~~~~~Lkpg-G~lvi~  174 (317)
T 1dl5_A          140 P--EFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP  174 (317)
T ss_dssp             G--GGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEEE
T ss_pred             c--cCCCeEEEEEcCCHHHHHHHHHHhcCCC-cEEEEE
Confidence            0  1237999998876655456788999998 998876

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=96.15  E-value=0.015  Score=52.31  Aligned_cols=81  Identities=20%  Similarity=0.293  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCC---c-EEEcCCCCCCccHHHHHHhhcC-
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGV---T-EFVNSKNCGDKSVSQIIIDMTD-  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~---~-~vv~~~~~~~~~~~~~i~~~~~-  270 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+    ++.+.   . .++.-+-.+.+++.+.+.+... 
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            4689999988 9999999999999999 899999998876543    23332   1 1222111011233333333321 


Q ss_pred             -CCccEEEEcCCC
Q 018022          271 -GGADYCFECVGL  282 (362)
Q Consensus       271 -~g~d~vid~~g~  282 (362)
                       +++|++|.+.|.
T Consensus        89 ~g~id~lv~nAg~  101 (281)
T 3svt_A           89 HGRLHGVVHCAGG  101 (281)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence             369999999985

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=96.15  E-value=0.012  Score=51.91  Aligned_cols=81  Identities=22%  Similarity=0.237  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC-chHHHHHH----hcCCc-EEEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI-SEKFEIGK----RFGVT-EFVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~-~~~~~~~~----~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ |.+|.+.+..+...|+ +|++++++ .++.+.+.    ..+.. .++.-+-.+.+++.+.+.+...  +
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG   84 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4678999998 9999999999999999 89999988 66554432    22432 2222221012233333333221  2


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus        85 ~id~vi~~Ag~   95 (258)
T 3afn_B           85 GIDVLINNAGG   95 (258)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999885

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=96.15  E-value=0.029  Score=49.56  Aligned_cols=79  Identities=22%  Similarity=0.302  Sum_probs=50.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHH-HHH----hcCCc-EEE--cCCCCCCccHHHHHHhhc--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE-IGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMT--  269 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~-~~~----~~g~~-~vv--~~~~~~~~~~~~~i~~~~--  269 (362)
                      .+.++||+|+ |.+|.+.++.+...|+ +|++++++.++.+ .++    +.+.. .++  |-.+  .+++.+.+.+..  
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~   89 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN--TDIVTKTIQQIDAD   89 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCC--HHHHHHHHHHHHHh
Confidence            3568999998 9999999999999999 9999998654432 222    22432 222  2222  123333333322  


Q ss_pred             CCCccEEEEcCCC
Q 018022          270 DGGADYCFECVGL  282 (362)
Q Consensus       270 ~~g~d~vid~~g~  282 (362)
                      -+.+|++|.+.|.
T Consensus        90 ~~~id~li~~Ag~  102 (265)
T 1h5q_A           90 LGPISGLIANAGV  102 (265)
T ss_dssp             SCSEEEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            1369999999884

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.14  E-value=0.061  Score=50.63  Aligned_cols=112  Identities=15%  Similarity=0.165  Sum_probs=76.9

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC----chH---------HHHHHhcCCcEEEcCCCCCCccHHHHHHh
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI----SEK---------FEIGKRFGVTEFVNSKNCGDKSVSQIIID  267 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~----~~~---------~~~~~~~g~~~vv~~~~~~~~~~~~~i~~  267 (362)
                      ++.+|+|.|+|..|..+++++..+|.++|++++++    .+|         .+++++....    ..   ..++.+.++ 
T Consensus       191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~----~~---~~~L~eav~-  262 (388)
T 1vl6_A          191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPE----RL---SGDLETALE-  262 (388)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTT----CC---CSCHHHHHT-
T ss_pred             CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhcc----Cc---hhhHHHHHc-
Confidence            66799999999999999999999999899999998    544         3444443210    11   145666664 


Q ss_pred             hcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 018022          268 MTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS  329 (362)
Q Consensus       268 ~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  329 (362)
                          ++|++|-+++.....++.++.|+++ -.++.++...    .++.+...+.-+..+..+
T Consensus       263 ----~ADVlIG~Sap~l~t~emVk~Ma~~-pIIfalSNPt----~E~~p~~a~~~g~~i~at  315 (388)
T 1vl6_A          263 ----GADFFIGVSRGNILKPEWIKKMSRK-PVIFALANPV----PEIDPELAREAGAFIVAT  315 (388)
T ss_dssp             ----TCSEEEECSCSSCSCHHHHTTSCSS-CEEEECCSSS----CSSCHHHHHHTTCSEEEE
T ss_pred             ----cCCEEEEeCCCCccCHHHHHhcCCC-CEEEEcCCCC----CCCCHHHHHHhcCeEEEe
Confidence                4899999988434346788889886 6555555422    367766666645455444

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=96.13  E-value=0.018  Score=53.15  Aligned_cols=89  Identities=17%  Similarity=0.159  Sum_probs=62.4

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcC-CchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV-ISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~-~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      .|.+|.|+|.|.+|...++.++..|. +|++.++ +.++ +.+.++|+.. .       .++.+.+.     ..|+|+.+
T Consensus       145 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~~~-~-------~~l~ell~-----~aDvVil~  209 (320)
T 1gdh_A          145 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASS-SDEASYQATF-H-------DSLDSLLS-----VSQFFSLN  209 (320)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCH-HHHHHHTCEE-C-------SSHHHHHH-----HCSEEEEC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcCh-hhhhhcCcEE-c-------CCHHHHHh-----hCCEEEEe
Confidence            57789999999999999999999999 9999998 7766 3555667532 1       12333333     36888888


Q ss_pred             CCCHH----HH-HHHHHHhccCCceEEEEcc
Q 018022          280 VGLAS----LV-QEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       280 ~g~~~----~~-~~~~~~l~~~~G~iv~~G~  305 (362)
                      +....    .+ ...+..|+++ ..++.++.
T Consensus       210 ~p~~~~t~~~i~~~~l~~mk~g-ailIn~ar  239 (320)
T 1gdh_A          210 APSTPETRYFFNKATIKSLPQG-AIVVNTAR  239 (320)
T ss_dssp             CCCCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             ccCchHHHhhcCHHHHhhCCCC-cEEEECCC
Confidence            77432    12 3456677776 77777764

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.12  E-value=0.017  Score=52.02  Aligned_cols=79  Identities=15%  Similarity=0.135  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-h----cCCcE-EE--cCCCCCCccHHHHHHhhcC-
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-R----FGVTE-FV--NSKNCGDKSVSQIIIDMTD-  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~----~g~~~-vv--~~~~~~~~~~~~~i~~~~~-  270 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|++++++.++.+.+. +    .+... .+  |-.+  .+++.+.+.+... 
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~  102 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRA--PPAVMAAVDQALKE  102 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            5789999998 9999999999999999 9999999887654432 2    24332 22  2222  1233333333221 


Q ss_pred             -CCccEEEEcCCC
Q 018022          271 -GGADYCFECVGL  282 (362)
Q Consensus       271 -~g~d~vid~~g~  282 (362)
                       +++|++|.+.|.
T Consensus       103 ~g~id~lv~nAg~  115 (277)
T 4fc7_A          103 FGRIDILINCAAG  115 (277)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCcC
Confidence             379999999983

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.11  E-value=0.026  Score=50.91  Aligned_cols=91  Identities=8%  Similarity=-0.001  Sum_probs=61.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCC--cEEEcCCCCCCccHHHHHHhhcCCCccEEE
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV--TEFVNSKNCGDKSVSQIIIDMTDGGADYCF  277 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~--~~vv~~~~~~~~~~~~~i~~~~~~g~d~vi  277 (362)
                      .+.+++|+|+|++|.+++..+...|+.+|+++.|+.+|.+.+ ++++.  ..++..++     +.       ...+|+||
T Consensus       119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~-----l~-------~~~~DivI  186 (272)
T 3pwz_A          119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEA-----LE-------GQSFDIVV  186 (272)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGG-----GT-------TCCCSEEE
T ss_pred             cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHH-----hc-------ccCCCEEE
Confidence            578999999999999999999999987999999999887654 44543  23333222     11       13699999


Q ss_pred             EcCCCHHHHH---HHHHHhccCCceEEEEc
Q 018022          278 ECVGLASLVQ---EAYACCRKGWGKTIVLG  304 (362)
Q Consensus       278 d~~g~~~~~~---~~~~~l~~~~G~iv~~G  304 (362)
                      ++++....-.   --...++++ ..++.+-
T Consensus       187 naTp~gm~~~~~~i~~~~l~~~-~~V~Dlv  215 (272)
T 3pwz_A          187 NATSASLTADLPPLPADVLGEA-ALAYELA  215 (272)
T ss_dssp             ECSSGGGGTCCCCCCGGGGTTC-SEEEESS
T ss_pred             ECCCCCCCCCCCCCCHHHhCcC-CEEEEee
Confidence            9988542100   012456665 5555554

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=96.11  E-value=0.013  Score=55.68  Aligned_cols=90  Identities=16%  Similarity=0.097  Sum_probs=60.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++..+.+.++++|+..+        .++.+.+.     ..|+|+.++
T Consensus       190 ~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~~~~~~~~~~~~G~~~~--------~~l~ell~-----~aDvV~l~~  255 (393)
T 2nac_A          190 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH--------ATREDMYP-----VCDVVTLNC  255 (393)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC--------SSHHHHGG-----GCSEEEECS
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEcCCccchhhHhhcCceec--------CCHHHHHh-----cCCEEEEec
Confidence            57899999999999999999999999 99999988766666666665421        12222221     367777776


Q ss_pred             CCH----HHH-HHHHHHhccCCceEEEEcc
Q 018022          281 GLA----SLV-QEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       281 g~~----~~~-~~~~~~l~~~~G~iv~~G~  305 (362)
                      ...    ..+ ...+..|+++ ..++.++.
T Consensus       256 Plt~~t~~li~~~~l~~mk~g-ailIN~aR  284 (393)
T 2nac_A          256 PLHPETEHMINDETLKLFKRG-AYIVNTAR  284 (393)
T ss_dssp             CCCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             CCchHHHHHhhHHHHhhCCCC-CEEEECCC
Confidence            632    112 3455666665 66666653

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.10  E-value=0.025  Score=48.93  Aligned_cols=102  Identities=15%  Similarity=0.087  Sum_probs=70.3

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHcC-----CCEEEEEcCCchHHHHHHhc----C-----C--cEEEcCCCCCCccH
Q 018022          198 NVEVGSTVVIFGLGSIGLAVAEGARLCG-----ATRIIGVDVISEKFEIGKRF----G-----V--TEFVNSKNCGDKSV  261 (362)
Q Consensus       198 ~~~~g~~vlI~Gag~~G~~a~~la~~~g-----~~~vi~~~~~~~~~~~~~~~----g-----~--~~vv~~~~~~~~~~  261 (362)
                      .++++++||-+|+|. |..+..+++..+     ..+|++++.+++.++.+++.    +     .  -.++..+.  ...+
T Consensus        77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~--~~~~  153 (227)
T 2pbf_A           77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNI--YQVN  153 (227)
T ss_dssp             TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCG--GGCC
T ss_pred             hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECCh--Hhcc
Confidence            578999999999977 888888888875     22999999999888777642    3     1  22333221  0111


Q ss_pred             HHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEcc
Q 018022          262 SQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       262 ~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      .+...  ..+.||+|+........+..+.+.|+++ |++++.-.
T Consensus       154 ~~~~~--~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lv~~~~  194 (227)
T 2pbf_A          154 EEEKK--ELGLFDAIHVGASASELPEILVDLLAEN-GKLIIPIE  194 (227)
T ss_dssp             HHHHH--HHCCEEEEEECSBBSSCCHHHHHHEEEE-EEEEEEEE
T ss_pred             cccCc--cCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEEc
Confidence            11001  1237999998877766678899999998 99887643

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=96.10  E-value=0.011  Score=52.49  Aligned_cols=82  Identities=12%  Similarity=0.169  Sum_probs=52.3

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHcC---CCEEEEEcCCchHHHHHHhc---CCc-EEEcCCCCCCccHHHHHHhh---
Q 018022          200 EVGSTVVIFGL-GSIGLAVAEGARLCG---ATRIIGVDVISEKFEIGKRF---GVT-EFVNSKNCGDKSVSQIIIDM---  268 (362)
Q Consensus       200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g---~~~vi~~~~~~~~~~~~~~~---g~~-~vv~~~~~~~~~~~~~i~~~---  268 (362)
                      -.+.++||+|+ |.+|.+.++.+...|   + +|++++++.++.+.++++   +.. .++..+-.+.+.+.+.+.++   
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   97 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGV   97 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHh
Confidence            34678999998 999999999999889   7 999999987755444332   322 22222211123344433333   


Q ss_pred             cCC-CccEEEEcCCC
Q 018022          269 TDG-GADYCFECVGL  282 (362)
Q Consensus       269 ~~~-g~d~vid~~g~  282 (362)
                      .+. ++|++|.+.|.
T Consensus        98 ~g~~~id~li~~Ag~  112 (267)
T 1sny_A           98 TKDQGLNVLFNNAGI  112 (267)
T ss_dssp             HGGGCCSEEEECCCC
T ss_pred             cCCCCccEEEECCCc
Confidence            222 59999999883

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=96.10  E-value=0.13  Score=43.68  Aligned_cols=97  Identities=19%  Similarity=0.193  Sum_probs=69.2

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc--EEEcCCCCCCccHHHHHHhhcCCCcc
Q 018022          197 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT--EFVNSKNCGDKSVSQIIIDMTDGGAD  274 (362)
Q Consensus       197 ~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~i~~~~~~g~d  274 (362)
                      ..+.++.+||-+|+|. |..+..+++. |. ++++++.+++.++.+++.+..  .++..+-   .++      ...+.+|
T Consensus        42 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~---~~~------~~~~~~D  109 (218)
T 3ou2_A           42 RAGNIRGDVLELASGT-GYWTRHLSGL-AD-RVTALDGSAEMIAEAGRHGLDNVEFRQQDL---FDW------TPDRQWD  109 (218)
T ss_dssp             TTTTSCSEEEEESCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHGGGCCTTEEEEECCT---TSC------CCSSCEE
T ss_pred             hcCCCCCeEEEECCCC-CHHHHHHHhc-CC-eEEEEeCCHHHHHHHHhcCCCCeEEEeccc---ccC------CCCCcee
Confidence            3478889999999876 7777777777 77 999999999999999886632  2232221   111      1233799


Q ss_pred             EEEEcCCC--------HHHHHHHHHHhccCCceEEEEccC
Q 018022          275 YCFECVGL--------ASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       275 ~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      +|+....-        ...++.+.+.|+++ |.+++....
T Consensus       110 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~~  148 (218)
T 3ou2_A          110 AVFFAHWLAHVPDDRFEAFWESVRSAVAPG-GVVEFVDVT  148 (218)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEEC
T ss_pred             EEEEechhhcCCHHHHHHHHHHHHHHcCCC-eEEEEEeCC
Confidence            99975432        35578889999998 999888653

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=96.09  E-value=0.011  Score=52.12  Aligned_cols=98  Identities=16%  Similarity=0.208  Sum_probs=60.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHH-cCCCEEEEEcCCch-HHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARL-CGATRIIGVDVISE-KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCF  277 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~-~g~~~vi~~~~~~~-~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vi  277 (362)
                      .+.++||+|+ +++|.+.++.+.. .|. +|+.++++++ ..+.      ...+.-+-.+.+++.+.+..+..+++|++|
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~-~v~~~~~~~~~~~~~------~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv   75 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNH-TVINIDIQQSFSAEN------LKFIKADLTKQQDITNVLDIIKNVSFDGIF   75 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTE-EEEEEESSCCCCCTT------EEEEECCTTCHHHHHHHHHHTTTCCEEEEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCc-EEEEecccccccccc------ceEEecCcCCHHHHHHHHHHHHhCCCCEEE
Confidence            4678999998 9999998877766 677 8888887765 2211      122222110123334444333323899999


Q ss_pred             EcCCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          278 ECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       278 d~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      .+.|..                         ...+.+...++++ |++++++..
T Consensus        76 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-g~iv~~sS~  128 (244)
T 4e4y_A           76 LNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG-ASIVFNGSD  128 (244)
T ss_dssp             ECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE-EEEEEECCG
T ss_pred             ECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC-cEEEEECCH
Confidence            999851                         1123344556666 899998754

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.09  E-value=0.014  Score=51.01  Aligned_cols=80  Identities=20%  Similarity=0.200  Sum_probs=53.1

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcC--CCEEEEEcCCchHHHHHHhc-CCc-EEEcCCCCCCccHHHHHHhh---cCC-C
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCG--ATRIIGVDVISEKFEIGKRF-GVT-EFVNSKNCGDKSVSQIIIDM---TDG-G  272 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g--~~~vi~~~~~~~~~~~~~~~-g~~-~vv~~~~~~~~~~~~~i~~~---~~~-g  272 (362)
                      +.++||+|+ |.+|.+.++.+...|  + +|++++++.++.+.+++. +.. .++..+-.+.+.+.+.+.++   .+. +
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            568999998 999999999999899  7 999999998887777665 222 22222210112232333322   221 5


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        82 id~li~~Ag~   91 (250)
T 1yo6_A           82 LSLLINNAGV   91 (250)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCcc
Confidence            9999999873

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.08  E-value=0.015  Score=52.37  Aligned_cols=79  Identities=27%  Similarity=0.264  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCC---c-EEE--cCCCCCCccHHHHHHhhc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV---T-EFV--NSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~---~-~vv--~~~~~~~~~~~~~i~~~~  269 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++++.+.+    .+.   . .++  |-.+  .+++.+.+.+..
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~   81 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT--EDGQDQIINSTL   81 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCC--HHHHHHHHHHHH
Confidence            4678999998 9999999999999999 99999999887655432    232   2 222  2222  122333333322


Q ss_pred             C--CCccEEEEcCCC
Q 018022          270 D--GGADYCFECVGL  282 (362)
Q Consensus       270 ~--~g~d~vid~~g~  282 (362)
                      .  +++|++|.+.|.
T Consensus        82 ~~~g~iD~lv~nAg~   96 (280)
T 1xkq_A           82 KQFGKIDVLVNNAGA   96 (280)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HhcCCCCEEEECCCC
Confidence            1  269999999873

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=96.08  E-value=0.038  Score=49.30  Aligned_cols=81  Identities=12%  Similarity=0.135  Sum_probs=49.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEc-CCchHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~-~~~~~~~~~----~~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++ ++.++.+..    +..+.. .++.-+-.+.+++.+.+.++..  +
T Consensus        24 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           24 AKRVAFVTGGMGGLGAAISRRLHDAGM-AVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            5678999998 9999999999999999 888887 444443332    223322 2222221011223333333221  2


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus       103 ~id~li~nAg~  113 (269)
T 3gk3_A          103 KVDVLINNAGI  113 (269)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            69999999884

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=96.07  E-value=0.036  Score=51.49  Aligned_cols=130  Identities=21%  Similarity=0.258  Sum_probs=84.2

Q ss_pred             EEEEECCChHHHHHHHHHHHc-CCCEEE-EEcCCchHHHH-HHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          204 TVVIFGLGSIGLAVAEGARLC-GATRII-GVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~-g~~~vi-~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      +|.|+|+|.+|...+..++.. ++ .++ +.+++.++.+. ++++|...++       .++.+.+.+   ..+|+|+.|+
T Consensus         4 rvgiIG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~~~~-------~~~~~ll~~---~~~D~V~i~t   72 (344)
T 3ezy_A            4 RIGVIGLGRIGTIHAENLKMIDDA-ILYAISDVREDRLREMKEKLGVEKAY-------KDPHELIED---PNVDAVLVCS   72 (344)
T ss_dssp             EEEEECCSHHHHHHHHHGGGSTTE-EEEEEECSCHHHHHHHHHHHTCSEEE-------SSHHHHHHC---TTCCEEEECS
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHhCCCcee-------CCHHHHhcC---CCCCEEEEcC
Confidence            688999999999877766654 56 555 56888787655 5567865544       234444432   2699999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH------HH-HhcCcEEEEeeccCCCccccHHHHHHHHHcCCcc
Q 018022          281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF------EV-LHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSY  353 (362)
Q Consensus       281 g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~------~~-~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~  353 (362)
                      +.....+.+..++..  |+-+++-..     +..+..      .+ -.++..+.-.+...+  ...+..+.+++++|+|-
T Consensus        73 p~~~h~~~~~~al~~--gk~v~~EKP-----~~~~~~e~~~l~~~a~~~g~~~~v~~~~R~--~p~~~~~k~~i~~G~iG  143 (344)
T 3ezy_A           73 STNTHSELVIACAKA--KKHVFCEKP-----LSLNLADVDRMIEETKKADVILFTGFNRRF--DRNFKKLKEAVENGTIG  143 (344)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEEESC-----SCSCHHHHHHHHHHHHHHTCCEEEECGGGG--CHHHHHHHHHHHTTTTS
T ss_pred             CCcchHHHHHHHHhc--CCeEEEECC-----CCCCHHHHHHHHHHHHHhCCcEEEeecccC--CHHHHHHHHHHHcCCCC
Confidence            988778888888887  566666542     222222      22 223554443333222  36688888999998764

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=96.06  E-value=0.01  Score=51.99  Aligned_cols=103  Identities=17%  Similarity=0.153  Sum_probs=68.8

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHh----cCCcEEEcCCCCCCccHHHHHHhhcC-
Q 018022          197 ANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTD-  270 (362)
Q Consensus       197 ~~~~~g~~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~~i~~~~~-  270 (362)
                      ....++.+||-+|+| .|..+..+++..+ ..++++++.+++..+.+++    .|...-+....   .+..+.+.++.. 
T Consensus        68 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~---~d~~~~l~~l~~~  143 (232)
T 3cbg_A           68 ISLTGAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRL---GPALATLEQLTQG  143 (232)
T ss_dssp             HHHHTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE---SCHHHHHHHHHTS
T ss_pred             HHhcCCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHHHhc
Confidence            344577899999987 6888888888763 2399999999998887764    35421111111   234444444431 


Q ss_pred             ---CCccEEEEcCCC---HHHHHHHHHHhccCCceEEEEc
Q 018022          271 ---GGADYCFECVGL---ASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       271 ---~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                         +.||+||-....   ...++.+.+.|+++ |.+++-.
T Consensus       144 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~Lkpg-G~lv~~~  182 (232)
T 3cbg_A          144 KPLPEFDLIFIDADKRNYPRYYEIGLNLLRRG-GLMVIDN  182 (232)
T ss_dssp             SSCCCEEEEEECSCGGGHHHHHHHHHHTEEEE-EEEEEEC
T ss_pred             CCCCCcCEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEeC
Confidence               479999955432   24578889999997 9988753

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=96.06  E-value=0.047  Score=48.95  Aligned_cols=85  Identities=19%  Similarity=0.208  Sum_probs=59.7

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc-EEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  282 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~  282 (362)
                      +|.|+|+|.+|.+.+..+...|. +|+++++++++.+.+.+.|.. .+..       ++    .+.  ...|+||.|+..
T Consensus         2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~-------~~----~~~--~~~D~vi~av~~   67 (279)
T 2f1k_A            2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQ-------DL----SLL--QTAKIIFLCTPI   67 (279)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEES-------CG----GGG--TTCSEEEECSCH
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCCCccccC-------CH----HHh--CCCCEEEEECCH
Confidence            58899999999999998888898 899999999998888887763 2221       11    112  258999999986


Q ss_pred             HHHHHHHH----HHhccCCceEEEEc
Q 018022          283 ASLVQEAY----ACCRKGWGKTIVLG  304 (362)
Q Consensus       283 ~~~~~~~~----~~l~~~~G~iv~~G  304 (362)
                      .. ....+    ..++++ ..++.++
T Consensus        68 ~~-~~~~~~~l~~~~~~~-~~vv~~~   91 (279)
T 2f1k_A           68 QL-ILPTLEKLIPHLSPT-AIVTDVA   91 (279)
T ss_dssp             HH-HHHHHHHHGGGSCTT-CEEEECC
T ss_pred             HH-HHHHHHHHHhhCCCC-CEEEECC
Confidence            53 33333    344554 4555553

>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5

Probab=96.05  E-value=0.1  Score=48.36  Aligned_cols=137  Identities=11%  Similarity=-0.108  Sum_probs=86.6

Q ss_pred             CCCCCCEEEEECCC-hHHHHHHHHHHHc--CCCEEEEEcCCchHHHH-HHhcCCcEEEcCCCCCCccHHHHHHhhcCCCc
Q 018022          198 NVEVGSTVVIFGLG-SIGLAVAEGARLC--GATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGA  273 (362)
Q Consensus       198 ~~~~g~~vlI~Gag-~~G~~a~~la~~~--g~~~vi~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~  273 (362)
                      +....-+|.|+|+| .+|...+...+..  +++.+.+.+++.++.+. ++++|...++       .++.+.+.+   ..+
T Consensus        14 ~~~~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~-------~~~~~ll~~---~~v   83 (340)
T 1zh8_A           14 KPLRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF-------DSYEELLES---GLV   83 (340)
T ss_dssp             --CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE-------SCHHHHHHS---SCC
T ss_pred             CCCCceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCccc-------CCHHHHhcC---CCC
Confidence            33444578999999 7898777777665  56344566777777655 5567865444       234444432   269


Q ss_pred             cEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHH------H-HhcCcEEEEeeccCCCccccHHHHHHH
Q 018022          274 DYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFE------V-LHSGKILMGSLFGGLKAKSDIPILLKR  346 (362)
Q Consensus       274 d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~------~-~~~~~~i~g~~~~~~~~~~~l~~~l~~  346 (362)
                      |+|+.|++.....+.+..+++.  |+-|++-.     ++..+..+      + -.++..+.-.+...+  ...++.+.++
T Consensus        84 D~V~i~tp~~~H~~~~~~al~a--GkhVl~EK-----Pla~~~~ea~~l~~~a~~~g~~~~v~~~~R~--~p~~~~~k~~  154 (340)
T 1zh8_A           84 DAVDLTLPVELNLPFIEKALRK--GVHVICEK-----PISTDVETGKKVVELSEKSEKTVYIAENFRH--VPAFWKAKEL  154 (340)
T ss_dssp             SEEEECCCGGGHHHHHHHHHHT--TCEEEEES-----SSSSSHHHHHHHHHHHHHCSSCEEEECGGGG--CHHHHHHHHH
T ss_pred             CEEEEeCCchHHHHHHHHHHHC--CCcEEEeC-----CCCCCHHHHHHHHHHHHHcCCeEEEEecccC--CHHHHHHHHH
Confidence            9999999988778888888888  57777754     22333322      2 234544443332222  3668888889


Q ss_pred             HHcCCcc
Q 018022          347 YMDKWSY  353 (362)
Q Consensus       347 ~~~g~l~  353 (362)
                      +++|+|-
T Consensus       155 i~~g~iG  161 (340)
T 1zh8_A          155 VESGAIG  161 (340)
T ss_dssp             HHTTTTS
T ss_pred             HhcCCCC
Confidence            9888764

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=96.05  E-value=0.049  Score=48.88  Aligned_cols=89  Identities=19%  Similarity=0.312  Sum_probs=62.0

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCC-EEEEEcCCchHHHHHHhcCCc-EEEcCCCCCCccHHHHHHhhcCC-CccEEEEcC
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTDG-GADYCFECV  280 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~  280 (362)
                      +|.|+|+|.+|.+.++.++..|.. +|++.++++++.+.+++.|.. ....       ++.+.+     . ..|+||.|+
T Consensus         3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~-------~~~~~~-----~~~aDvVilav   70 (281)
T 2g5c_A            3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTT-------SIAKVE-----DFSPDFVMLSS   70 (281)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEES-------CGGGGG-----GTCCSEEEECS
T ss_pred             EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccC-------CHHHHh-----cCCCCEEEEcC
Confidence            689999999999999988888853 799999999999988888864 2221       111111     2 489999999


Q ss_pred             CCHHH---HHHHHHHhccCCceEEEEcc
Q 018022          281 GLASL---VQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       281 g~~~~---~~~~~~~l~~~~G~iv~~G~  305 (362)
                      +....   +..+...++++ ..++.++.
T Consensus        71 p~~~~~~v~~~l~~~l~~~-~iv~~~~~   97 (281)
T 2g5c_A           71 PVRTFREIAKKLSYILSED-ATVTDQGS   97 (281)
T ss_dssp             CHHHHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred             CHHHHHHHHHHHHhhCCCC-cEEEECCC
Confidence            87642   23344456665 55666554

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=96.04  E-value=0.039  Score=50.56  Aligned_cols=87  Identities=16%  Similarity=0.261  Sum_probs=62.3

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  282 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~  282 (362)
                      .+|.|+|+|.+|...+..+...|. +|++.++++++.+.+.+.|...   .     .+..+.+.     .+|+||.|+..
T Consensus        31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~-----~~~~~~~~-----~~DvVi~av~~   96 (316)
T 2uyy_A           31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRTAEKCDLFIQEGARL---G-----RTPAEVVS-----TCDITFACVSD   96 (316)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSGGGGHHHHHTTCEE---C-----SCHHHHHH-----HCSEEEECCSS
T ss_pred             CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHcCCEE---c-----CCHHHHHh-----cCCEEEEeCCC
Confidence            579999999999998888888898 8999999999888887776531   1     22333333     37999999997


Q ss_pred             HHHHHHHHH-------HhccCCceEEEEc
Q 018022          283 ASLVQEAYA-------CCRKGWGKTIVLG  304 (362)
Q Consensus       283 ~~~~~~~~~-------~l~~~~G~iv~~G  304 (362)
                      +..+...+.       .++++ ..++.++
T Consensus        97 ~~~~~~v~~~~~~~~~~l~~~-~~vv~~s  124 (316)
T 2uyy_A           97 PKAAKDLVLGPSGVLQGIRPG-KCYVDMS  124 (316)
T ss_dssp             HHHHHHHHHSTTCGGGGCCTT-CEEEECS
T ss_pred             HHHHHHHHcCchhHhhcCCCC-CEEEECC
Confidence            655665553       34554 4555554

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.03  E-value=0.04  Score=55.46  Aligned_cols=101  Identities=15%  Similarity=0.232  Sum_probs=64.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc---------hHHHH----HHhcCCcEEEcCCCCCCcc---HHH
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS---------EKFEI----GKRFGVTEFVNSKNCGDKS---VSQ  263 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~---------~~~~~----~~~~g~~~vv~~~~~~~~~---~~~  263 (362)
                      .+.++||+|+ +++|++.++.+...|+ +|++++++.         ++++.    +++.|...+.|..+  ..+   +.+
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d--~~~~~~~v~   83 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGA-KVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNN--VLDGDKIVE   83 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECC-----------CHHHHHHHHHHHTTCEEEEECCC--TTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCC--HHHHHHHHH
Confidence            4678999998 9999999999999999 899887654         33332    23345444555544  223   333


Q ss_pred             HHHhhcCCCccEEEEcCCCH-------------------------HHHHHHHHHhccC-CceEEEEcc
Q 018022          264 IIIDMTDGGADYCFECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGV  305 (362)
Q Consensus       264 ~i~~~~~~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~  305 (362)
                      .+.+.. |.+|++|++.|..                         ...+.++..|+.. +|+|+.++.
T Consensus        84 ~~~~~~-G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS  150 (604)
T 2et6_A           84 TAVKNF-GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSS  150 (604)
T ss_dssp             HHHHHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             HHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            333322 3699999999841                         2244566666432 389999975

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=96.03  E-value=0.017  Score=52.05  Aligned_cols=81  Identities=14%  Similarity=0.185  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EEcCCCCCCccHHHHHHhhc--CCC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FVNSKNCGDKSVSQIIIDMT--DGG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv~~~~~~~~~~~~~i~~~~--~~g  272 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.    +.+... ++..+-.+.+.+.+.+.+..  .++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~  121 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN  121 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            3578999998 9999999998888898 8888988877665432    224332 22221101123333333321  237


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus       122 id~li~~Ag~  131 (285)
T 2c07_A          122 VDILVNNAGI  131 (285)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.03  E-value=0.051  Score=50.95  Aligned_cols=91  Identities=16%  Similarity=0.185  Sum_probs=64.4

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      ..+|.|+|.|.+|...+..+...|+ .|++.++++++.+.+.+.|+..   .     .++.+.+.+.  ..+|+||-++.
T Consensus        22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~~---~-----~s~~e~~~~a--~~~DvVi~~vp   90 (358)
T 4e21_A           22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALEREGIAG---A-----RSIEEFCAKL--VKPRVVWLMVP   90 (358)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCBC---C-----SSHHHHHHHS--CSSCEEEECSC
T ss_pred             CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCEE---e-----CCHHHHHhcC--CCCCEEEEeCC
Confidence            3579999999999999999999998 9999999999999888877531   1     2344444432  13699999998


Q ss_pred             CHHHHHH----HHHHhccCCceEEEEcc
Q 018022          282 LASLVQE----AYACCRKGWGKTIVLGV  305 (362)
Q Consensus       282 ~~~~~~~----~~~~l~~~~G~iv~~G~  305 (362)
                      ... +..    +...++++ ..++.++.
T Consensus        91 ~~~-v~~vl~~l~~~l~~g-~iiId~st  116 (358)
T 4e21_A           91 AAV-VDSMLQRMTPLLAAN-DIVIDGGN  116 (358)
T ss_dssp             GGG-HHHHHHHHGGGCCTT-CEEEECSS
T ss_pred             HHH-HHHHHHHHHhhCCCC-CEEEeCCC
Confidence            763 443    34445554 45555543

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=96.01  E-value=0.017  Score=51.71  Aligned_cols=81  Identities=19%  Similarity=0.265  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc-hHHHHH----HhcCCcE-EEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFEIG----KRFGVTE-FVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~-~~~~~~----~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++. +..+.+    ++.+... ++..+-.+.+++.+.+.++..  +
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  106 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG  106 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            5788999998 9999999999999999 898888844 433332    3344332 332222112333333333322  3


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus       107 ~id~li~nAg~  117 (271)
T 4iin_A          107 GLSYLVNNAGV  117 (271)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999985

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.01  E-value=0.0094  Score=53.70  Aligned_cols=94  Identities=11%  Similarity=-0.010  Sum_probs=60.4

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHH-HHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      .+.+++|+|+|++|.+++..+...|. +|++++++.++.+. +++++...-++..+  .+++    .+   +.+|++|++
T Consensus       118 ~~k~vlViGaGg~g~a~a~~L~~~G~-~V~v~~R~~~~~~~la~~~~~~~~~~~~~--~~~~----~~---~~~DivVn~  187 (271)
T 1nyt_A          118 PGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALS--MDEL----EG---HEFDLIINA  187 (271)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECC--SGGG----TT---CCCSEEEEC
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHhhccCCeeEec--HHHh----cc---CCCCEEEEC
Confidence            57899999999999999999999997 99999999888654 44554310011111  0111    11   469999999


Q ss_pred             CCCHHHH--H-HHHHHhccCCceEEEEcc
Q 018022          280 VGLASLV--Q-EAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       280 ~g~~~~~--~-~~~~~l~~~~G~iv~~G~  305 (362)
                      +|....-  . .-...++++ ..++.+..
T Consensus       188 t~~~~~~~~~~i~~~~l~~~-~~v~D~~y  215 (271)
T 1nyt_A          188 TSSGISGDIPAIPSSLIHPG-IYCYDMFY  215 (271)
T ss_dssp             CSCGGGTCCCCCCGGGCCTT-CEEEESCC
T ss_pred             CCCCCCCCCCCCCHHHcCCC-CEEEEecc
Confidence            9976520  0 011235554 55666654

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=95.99  E-value=0.059  Score=49.68  Aligned_cols=129  Identities=17%  Similarity=0.156  Sum_probs=84.4

Q ss_pred             EEEEECCChHHHHHHHHHHHc-CCCEEEEEcCCchHHHH-HHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          204 TVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~-g~~~vi~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      +|.|+|+|.+|...+..++.. +++.+.+.+++.++.+. ++++|..    +     .++.+.+.+   ..+|+|+.|++
T Consensus         5 ~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~----~-----~~~~~~l~~---~~~D~V~i~tp   72 (331)
T 4hkt_A            5 RFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE----V-----RTIDAIEAA---ADIDAVVICTP   72 (331)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE----E-----CCHHHHHHC---TTCCEEEECSC
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC----c-----CCHHHHhcC---CCCCEEEEeCC
Confidence            688999999999888777765 67334467888887655 4567765    2     234444432   26999999999


Q ss_pred             CHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH------HH-HhcCcEEEEeeccCCCccccHHHHHHHHHcCCcc
Q 018022          282 LASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF------EV-LHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSY  353 (362)
Q Consensus       282 ~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~------~~-~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~  353 (362)
                      .....+.+..++..  |+-+++-..     +..+..      .+ -.++..+.-.+...+  ...+..+.+++++|+|-
T Consensus        73 ~~~h~~~~~~al~~--gk~v~~EKP-----~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~--~p~~~~~~~~i~~g~iG  142 (331)
T 4hkt_A           73 TDTHADLIERFARA--GKAIFCEKP-----IDLDAERVRACLKVVSDTKAKLMVGFNRRF--DPHFMAVRKAIDDGRIG  142 (331)
T ss_dssp             GGGHHHHHHHHHHT--TCEEEECSC-----SCSSHHHHHHHHHHHHHTTCCEEECCGGGG--CHHHHHHHHHHHTTTTC
T ss_pred             chhHHHHHHHHHHc--CCcEEEecC-----CCCCHHHHHHHHHHHHHcCCeEEEcccccC--CHHHHHHHHHHHcCCCC
Confidence            88778888888887  566777542     222222      22 234555543333222  36688889999998874

>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X

Probab=95.99  E-value=0.088  Score=48.57  Aligned_cols=131  Identities=9%  Similarity=0.046  Sum_probs=83.9

Q ss_pred             EEEEECCChHHHHHHHHHHHcC---CCEEEEEcCCchHHHH-HHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          204 TVVIFGLGSIGLAVAEGARLCG---ATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g---~~~vi~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      ++.|+|+|.+|...+..++...   ++.+.+.+++.++.+. ++++|...+.       .++.+.+.+   ..+|+|+.+
T Consensus         4 rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~-------~~~~~ll~~---~~vD~V~i~   73 (334)
T 3ohs_X            4 RWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAY-------GSYEELAKD---PNVEVAYVG   73 (334)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEE-------SSHHHHHHC---TTCCEEEEC
T ss_pred             EEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCccc-------CCHHHHhcC---CCCCEEEEC
Confidence            6889999999998777766553   3244556777777654 5567875443       234444432   369999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH------HH-HhcCcEEEEeeccCCCccccHHHHHHHHHcCCc
Q 018022          280 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF------EV-LHSGKILMGSLFGGLKAKSDIPILLKRYMDKWS  352 (362)
Q Consensus       280 ~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~------~~-~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l  352 (362)
                      +......+.+..+++.  |+-|++-.+     +..+..      .+ -.++..+.-.+...+  ...+..+.+++++|+|
T Consensus        74 tp~~~H~~~~~~al~~--GkhVl~EKP-----~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~--~p~~~~~k~~i~~g~i  144 (334)
T 3ohs_X           74 TQHPQHKAAVMLCLAA--GKAVLCEKP-----MGVNAAEVREMVTEARSRGLFLMEAIWTRF--FPASEALRSVLAQGTL  144 (334)
T ss_dssp             CCGGGHHHHHHHHHHT--TCEEEEESS-----SSSSHHHHHHHHHHHHHTTCCEEEECGGGG--SHHHHHHHHHHHHTTT
T ss_pred             CCcHHHHHHHHHHHhc--CCEEEEECC-----CCCCHHHHHHHHHHHHHhCCEEEEEEhHhc--CHHHHHHHHHHhcCCC
Confidence            9988778888888888  577777542     233332      22 234554443332222  3567888888888877


Q ss_pred             c
Q 018022          353 Y  353 (362)
Q Consensus       353 ~  353 (362)
                      -
T Consensus       145 G  145 (334)
T 3ohs_X          145 G  145 (334)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=95.98  E-value=0.028  Score=51.65  Aligned_cols=75  Identities=20%  Similarity=0.220  Sum_probs=51.6

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC---chHHHHH-Hhc----CCc-EEEcCCCCCCcc-HHHHHHhhcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI---SEKFEIG-KRF----GVT-EFVNSKNCGDKS-VSQIIIDMTD  270 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~---~~~~~~~-~~~----g~~-~vv~~~~~~~~~-~~~~i~~~~~  270 (362)
                      .+.++||+|+|++|.+++..+...|+++|+++.|+   .+|.+.+ +++    +.. .+++..+   .+ +.+.+.    
T Consensus       147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~---l~~~~~~l~----  219 (312)
T 3t4e_A          147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLAD---QHAFTEALA----  219 (312)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTC---HHHHHHHHH----
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHh---hhhhHhhcc----
Confidence            57899999999999999999999999899999999   5555443 222    222 2333332   11 122232    


Q ss_pred             CCccEEEEcCCCH
Q 018022          271 GGADYCFECVGLA  283 (362)
Q Consensus       271 ~g~d~vid~~g~~  283 (362)
                       .+|+||+|++..
T Consensus       220 -~~DiIINaTp~G  231 (312)
T 3t4e_A          220 -SADILTNGTKVG  231 (312)
T ss_dssp             -HCSEEEECSSTT
T ss_pred             -CceEEEECCcCC
Confidence             489999998854

>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}

Probab=95.98  E-value=0.14  Score=47.87  Aligned_cols=130  Identities=15%  Similarity=0.060  Sum_probs=80.6

Q ss_pred             CEEEEECCChHHHH-HHHHHHHc-CCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          203 STVVIFGLGSIGLA-VAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       203 ~~vlI~Gag~~G~~-a~~la~~~-g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      -+|.|+|+|.+|.. .+...+.. +++.+.+.+++.++.+  ++++...++       .++.+.+.   ...+|+|+.|+
T Consensus         8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~--~~~~~~~~~-------~~~~~ll~---~~~~D~V~i~t   75 (364)
T 3e82_A            8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVK--RDLPDVTVI-------ASPEAAVQ---HPDVDLVVIAS   75 (364)
T ss_dssp             EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH--HHCTTSEEE-------SCHHHHHT---CTTCSEEEECS
T ss_pred             ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHH--hhCCCCcEE-------CCHHHHhc---CCCCCEEEEeC
Confidence            36899999999985 66666654 6733445566666544  445433333       23333332   12699999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH------HH-HhcCcEEEEeeccCCCccccHHHHHHHHHcCCcc
Q 018022          281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF------EV-LHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSY  353 (362)
Q Consensus       281 g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~------~~-~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~  353 (362)
                      +.....+.+..+++.  |+-+++-.     ++..+..      .+ -.++..+.-.+...+  ...+..+.+++++|+|-
T Consensus        76 p~~~H~~~~~~al~a--Gk~Vl~EK-----Pla~~~~e~~~l~~~a~~~g~~~~v~~~~r~--~p~~~~~~~~i~~g~iG  146 (364)
T 3e82_A           76 PNATHAPLARLALNA--GKHVVVDK-----PFTLDMQEARELIALAEEKQRLLSVFHNRRW--DSDYLGIRQVIEQGTLG  146 (364)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEECS-----CSCSSHHHHHHHHHHHHHTTCCEEECCCCTT--CHHHHHHHHHHHHTTTC
T ss_pred             ChHHHHHHHHHHHHC--CCcEEEeC-----CCcCCHHHHHHHHHHHHHhCCeEEEEeeccc--CHHHHHHHHHHHcCCCc
Confidence            988778888899888  57777743     2333332      22 234555543332222  35678888899888764

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=95.96  E-value=0.13  Score=41.62  Aligned_cols=96  Identities=6%  Similarity=0.019  Sum_probs=60.9

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC-chHHHHHHh---cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEE
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI-SEKFEIGKR---FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCF  277 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~-~~~~~~~~~---~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vi  277 (362)
                      ..+++|.|+|.+|...++.+...|. +|++++++ +++.+.++.   .|.. ++.-+.   .+ .+.+.+..-.++|.||
T Consensus         3 ~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~~~~-~i~gd~---~~-~~~l~~a~i~~ad~vi   76 (153)
T 1id1_A            3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNAD-VIPGDS---ND-SSVLKKAGIDRCRAIL   76 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCE-EEESCT---TS-HHHHHHHTTTTCSEEE
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcCCCe-EEEcCC---CC-HHHHHHcChhhCCEEE
Confidence            4678999999999999999999998 89999987 455554442   2443 333222   11 2334433112799999


Q ss_pred             EcCCCHHH---HHHHHHHhccCCceEEEEc
Q 018022          278 ECVGLASL---VQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       278 d~~g~~~~---~~~~~~~l~~~~G~iv~~G  304 (362)
                      -+++....   +....+.+.+. .+++..-
T Consensus        77 ~~~~~d~~n~~~~~~a~~~~~~-~~ii~~~  105 (153)
T 1id1_A           77 ALSDNDADNAFVVLSAKDMSSD-VKTVLAV  105 (153)
T ss_dssp             ECSSCHHHHHHHHHHHHHHTSS-SCEEEEC
T ss_pred             EecCChHHHHHHHHHHHHHCCC-CEEEEEE
Confidence            99998742   22334444443 5666543

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=95.95  E-value=0.033  Score=49.45  Aligned_cols=95  Identities=22%  Similarity=0.353  Sum_probs=66.6

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EEEcCCCCCCccHHHHHHhhcCCCc
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMTDGGA  273 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~~i~~~~~~g~  273 (362)
                      ++++++||-+|+|. |..++.+++ .|. +|++++.++...+.+++    .+.. .++.      .++.+.   +..+.|
T Consensus       118 ~~~~~~VLDiGcG~-G~l~~~la~-~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~------~d~~~~---~~~~~f  185 (254)
T 2nxc_A          118 LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLE------GSLEAA---LPFGPF  185 (254)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEE------SCHHHH---GGGCCE
T ss_pred             cCCCCEEEEecCCC-cHHHHHHHH-hCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEE------CChhhc---CcCCCC
Confidence            67899999999876 777776666 577 99999999988877765    3432 2222      233332   223479


Q ss_pred             cEEEEcCCC---HHHHHHHHHHhccCCceEEEEccC
Q 018022          274 DYCFECVGL---ASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       274 d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      |+|+.....   ...+..+.+.|+++ |++++.+..
T Consensus       186 D~Vv~n~~~~~~~~~l~~~~~~Lkpg-G~lils~~~  220 (254)
T 2nxc_A          186 DLLVANLYAELHAALAPRYREALVPG-GRALLTGIL  220 (254)
T ss_dssp             EEEEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEEE
T ss_pred             CEEEECCcHHHHHHHHHHHHHHcCCC-CEEEEEeec
Confidence            999976432   24467888999998 999998753

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=95.95  E-value=0.018  Score=47.88  Aligned_cols=101  Identities=16%  Similarity=0.174  Sum_probs=69.9

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCC-c--EEEcCCCCCCccHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV-T--EFVNSKNCGDKSVSQII  265 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~-~--~vv~~~~~~~~~~~~~i  265 (362)
                      +.....+.++.+||-+|+|. |..+..+++.. . ++++++.+++..+.+++    .+. .  .++.      .++.+.+
T Consensus        25 ~~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~-~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~------~d~~~~~   95 (192)
T 1l3i_A           25 IMCLAEPGKNDVAVDVGCGT-GGVTLELAGRV-R-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLME------GDAPEAL   95 (192)
T ss_dssp             HHHHHCCCTTCEEEEESCTT-SHHHHHHHTTS-S-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE------SCHHHHH
T ss_pred             HHHhcCCCCCCEEEEECCCC-CHHHHHHHHhc-C-EEEEEECCHHHHHHHHHHHHHcCCCcceEEEe------cCHHHhc
Confidence            34556788999999999977 77777777766 4 99999999988887765    343 1  2222      2333322


Q ss_pred             HhhcCCCccEEEEcCCC---HHHHHHHHHHhccCCceEEEEcc
Q 018022          266 IDMTDGGADYCFECVGL---ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       266 ~~~~~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ...  +.+|+|+.....   ...+..+.+.|+++ |++++...
T Consensus        96 ~~~--~~~D~v~~~~~~~~~~~~l~~~~~~l~~g-G~l~~~~~  135 (192)
T 1l3i_A           96 CKI--PDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTAI  135 (192)
T ss_dssp             TTS--CCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             ccC--CCCCEEEECCchHHHHHHHHHHHHhcCCC-cEEEEEec
Confidence            211  279999976442   35577888999997 99887643

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=95.95  E-value=0.025  Score=57.02  Aligned_cols=102  Identities=19%  Similarity=0.252  Sum_probs=60.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcC---------CchHHHH----HHhcCCcEEEcCCCCCCccHHHHHH
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV---------ISEKFEI----GKRFGVTEFVNSKNCGDKSVSQIII  266 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~---------~~~~~~~----~~~~g~~~vv~~~~~~~~~~~~~i~  266 (362)
                      .|.++||+|+ +++|.+.+..+...|+ +|+++++         +.++.+.    +++.+...+.|..+  ..+..+.+.
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d--~~~~~~~~~   94 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGA-KVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNS--VIDGAKVIE   94 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEC--------------CHHHHHHHHHHTTCCEEECCCC--GGGHHHHHC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCC--HHHHHHHHH
Confidence            5788999998 9999999999999999 9998876         4444333    33455555666544  233334443


Q ss_pred             hhcC--CCccEEEEcCCCH-------------------------HHHHHHHHHhccC-CceEEEEcc
Q 018022          267 DMTD--GGADYCFECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGV  305 (362)
Q Consensus       267 ~~~~--~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~  305 (362)
                      +...  +.+|++|++.|..                         ...+.++..|+.. +|+|++++.
T Consensus        95 ~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS  161 (613)
T 3oml_A           95 TAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSS  161 (613)
T ss_dssp             ----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred             HHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            3332  2799999999852                         1234455555542 379999865

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=95.95  E-value=0.027  Score=52.19  Aligned_cols=88  Identities=22%  Similarity=0.260  Sum_probs=59.1

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++.++.+.+.+.|...+         ++.+.+.     ..|+|+.++
T Consensus       154 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~---------~l~e~l~-----~aDvVi~~v  218 (330)
T 2gcg_A          154 TQSTVGIIGLGRIGQAIARRLKPFGV-QRFLYTGRQPRPEEAAEFQAEFV---------STPELAA-----QSDFIVVAC  218 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-CEEEEESSSCCHHHHHTTTCEEC---------CHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcchhHHHhcCceeC---------CHHHHHh-----hCCEEEEeC
Confidence            46789999999999999999999999 89999988776666666554321         1222232     267777777


Q ss_pred             CCHH----HH-HHHHHHhccCCceEEEEc
Q 018022          281 GLAS----LV-QEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       281 g~~~----~~-~~~~~~l~~~~G~iv~~G  304 (362)
                      +...    .+ ...+..|+++ ..++.++
T Consensus       219 p~~~~t~~~i~~~~~~~mk~g-ailIn~s  246 (330)
T 2gcg_A          219 SLTPATEGLCNKDFFQKMKET-AVFINIS  246 (330)
T ss_dssp             CCCTTTTTCBSHHHHHHSCTT-CEEEECS
T ss_pred             CCChHHHHhhCHHHHhcCCCC-cEEEECC
Confidence            6431    12 3455666665 5555554

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=95.94  E-value=0.029  Score=52.32  Aligned_cols=131  Identities=15%  Similarity=0.121  Sum_probs=85.4

Q ss_pred             CEEEEECCChHHHHHHHHHHHc-CCCEEEEEcCCchHHHHH-HhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          203 STVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~-g~~~vi~~~~~~~~~~~~-~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      -+|.|+|+|.+|...+..++.. +++.+.+.+++.++.+.+ +++|+..   +     .++.+.+.   ...+|+|+.|+
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~---~-----~~~~~~l~---~~~~D~V~i~t   74 (354)
T 3db2_A            6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAG---D-----ATMEALLA---REDVEMVIITV   74 (354)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCC---C-----SSHHHHHH---CSSCCEEEECS
T ss_pred             ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCC---c-----CCHHHHhc---CCCCCEEEEeC
Confidence            4789999999999888777765 673444668888877654 5577642   2     33444443   23699999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH------HH-HhcCcEEEEeeccCCCccccHHHHHHHHHcCCcc
Q 018022          281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF------EV-LHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSY  353 (362)
Q Consensus       281 g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~------~~-~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~  353 (362)
                      +.....+.+..++..  |+-+++-.+     +..+..      .+ ..++..+.-.+...+  ...+..+.+++++|+|-
T Consensus        75 p~~~h~~~~~~al~~--gk~vl~EKP-----~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~--~p~~~~~k~~i~~g~iG  145 (354)
T 3db2_A           75 PNDKHAEVIEQCARS--GKHIYVEKP-----ISVSLDHAQRIDQVIKETGVKFLCGHSSRR--LGALRKMKEMIDTKEIG  145 (354)
T ss_dssp             CTTSHHHHHHHHHHT--TCEEEEESS-----SCSSHHHHHHHHHHHHHHCCCEEEECGGGG--SHHHHHHHHHHHTTTTC
T ss_pred             ChHHHHHHHHHHHHc--CCEEEEccC-----CCCCHHHHHHHHHHHHHcCCeEEEeechhc--CHHHHHHHHHHhcCCCC
Confidence            998778888888887  566777542     222221      22 234555443333322  36788888999998873

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=95.93  E-value=0.013  Score=50.87  Aligned_cols=95  Identities=21%  Similarity=0.203  Sum_probs=67.7

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHcCC------CEEEEEcCCchHHHHHHhc----C-------CcEEEcCCCCCCcc
Q 018022          198 NVEVGSTVVIFGLGSIGLAVAEGARLCGA------TRIIGVDVISEKFEIGKRF----G-------VTEFVNSKNCGDKS  260 (362)
Q Consensus       198 ~~~~g~~vlI~Gag~~G~~a~~la~~~g~------~~vi~~~~~~~~~~~~~~~----g-------~~~vv~~~~~~~~~  260 (362)
                      .++++++||-+|+|. |..+..+++..+.      .+|++++.+++.++.+++.    +       .-.++..+.     
T Consensus        81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-----  154 (227)
T 1r18_A           81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDG-----  154 (227)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCG-----
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCc-----
Confidence            578999999999976 8888888887652      3999999999888776542    2       122332221     


Q ss_pred             HHHHHHhhcC-CCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 018022          261 VSQIIIDMTD-GGADYCFECVGLASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       261 ~~~~i~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  303 (362)
                       .+   .+.. +.||+|+...........+.+.|+++ |++++.
T Consensus       155 -~~---~~~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lvi~  193 (227)
T 1r18_A          155 -RK---GYPPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVP  193 (227)
T ss_dssp             -GG---CCGGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             -cc---CCCcCCCccEEEECCchHHHHHHHHHHhcCC-CEEEEE
Confidence             11   1112 37999998877766568899999998 988765

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=95.93  E-value=0.019  Score=51.50  Aligned_cols=81  Identities=16%  Similarity=0.182  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcC-CchHHHHH----HhcCCcE-EEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIG----KRFGVTE-FVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~-~~~~~~~~----~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|+++++ +.++.+.+    ++.+... ++.-+-.+.+++.+.+.+...  +
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g  105 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG  105 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4678999998 9999999999999999 8888777 44544433    3334332 222211011233333333221  2


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|.+.|.
T Consensus       106 ~id~lv~nAg~  116 (269)
T 4dmm_A          106 RLDVLVNNAGI  116 (269)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999885

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=95.92  E-value=0.03  Score=49.18  Aligned_cols=100  Identities=22%  Similarity=0.273  Sum_probs=70.5

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc---EEEcCCCCCCccHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQII  265 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~~~i  265 (362)
                      +.....++++.+||-+|+|. |..+..+++..+. ++++++.+++.++.+++    .|..   .++..+-   .++    
T Consensus        28 l~~~~~~~~~~~VLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~---~~~----   98 (256)
T 1nkv_A           28 LGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDA---AGY----   98 (256)
T ss_dssp             HHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCC---TTC----
T ss_pred             HHHhcCCCCCCEEEEECCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECCh---HhC----
Confidence            45667789999999999977 7788888888888 99999999988777754    3432   2332222   111    


Q ss_pred             HhhcCCCccEEEEcC------CCHHHHHHHHHHhccCCceEEEEc
Q 018022          266 IDMTDGGADYCFECV------GLASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       266 ~~~~~~g~d~vid~~------g~~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                        ...+.||+|+...      .-...+..+.+.|+++ |++++.-
T Consensus        99 --~~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~~~~  140 (256)
T 1nkv_A           99 --VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIGE  140 (256)
T ss_dssp             --CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEEE
T ss_pred             --CcCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCC-eEEEEec
Confidence              0123799999621      2345588999999998 9988763

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=95.91  E-value=0.065  Score=48.55  Aligned_cols=87  Identities=16%  Similarity=0.302  Sum_probs=61.3

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  282 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~  282 (362)
                      -+|.|+|+|.+|...+..+...|. +|++.++++++.+.+.+.|.. +  .     .++.+.+.     .+|+||.|++.
T Consensus         5 ~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~-~--~-----~~~~~~~~-----~~D~vi~~vp~   70 (301)
T 3cky_A            5 IKIGFIGLGAMGKPMAINLLKEGV-TVYAFDLMEANVAAVVAQGAQ-A--C-----ENNQKVAA-----ASDIIFTSLPN   70 (301)
T ss_dssp             CEEEEECCCTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHTTTCE-E--C-----SSHHHHHH-----HCSEEEECCSS
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCe-e--c-----CCHHHHHh-----CCCEEEEECCC
Confidence            479999999999998888888898 899999999988887766643 1  1     22333333     37999999987


Q ss_pred             HHHHHHHH-------HHhccCCceEEEEc
Q 018022          283 ASLVQEAY-------ACCRKGWGKTIVLG  304 (362)
Q Consensus       283 ~~~~~~~~-------~~l~~~~G~iv~~G  304 (362)
                      +..+...+       ..++++ ..++.++
T Consensus        71 ~~~~~~v~~~~~~l~~~l~~~-~~vv~~~   98 (301)
T 3cky_A           71 AGIVETVMNGPGGVLSACKAG-TVIVDMS   98 (301)
T ss_dssp             HHHHHHHHHSTTCHHHHSCTT-CEEEECC
T ss_pred             HHHHHHHHcCcchHhhcCCCC-CEEEECC
Confidence            65455444       345664 4555543

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=95.89  E-value=0.034  Score=48.48  Aligned_cols=73  Identities=16%  Similarity=0.044  Sum_probs=50.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHc--CCCEEEEEcCCchHHHHHHhcCCcEEE-cCCCCCCccHHHHHHhhcCCCccEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLC--GATRIIGVDVISEKFEIGKRFGVTEFV-NSKNCGDKSVSQIIIDMTDGGADYC  276 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~--g~~~vi~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~~i~~~~~~g~d~v  276 (362)
                      .+.+|||+|+ |.+|...++.+...  |+ +|++++++.++.+.+ ..+...+. |..+      .+.+.++.. ++|+|
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~-~V~~~~r~~~~~~~~-~~~~~~~~~D~~d------~~~~~~~~~-~~d~v   73 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKEKI-GGEADVFIGDITD------ADSINPAFQ-GIDAL   73 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTC-EEEEEESCHHHHHHT-TCCTTEEECCTTS------HHHHHHHHT-TCSEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCc-EEEEEEcCCCchhhc-CCCeeEEEecCCC------HHHHHHHHc-CCCEE
Confidence            4678999998 99999999998888  77 999999987766543 12233222 2222      233444333 59999


Q ss_pred             EEcCCC
Q 018022          277 FECVGL  282 (362)
Q Consensus       277 id~~g~  282 (362)
                      |.++|.
T Consensus        74 i~~a~~   79 (253)
T 1xq6_A           74 VILTSA   79 (253)
T ss_dssp             EECCCC
T ss_pred             EEeccc
Confidence            998873

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=95.86  E-value=0.027  Score=51.26  Aligned_cols=36  Identities=28%  Similarity=0.412  Sum_probs=32.4

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      ...+|+|+|+|++|..++..+.+.|+.++..+|.+.
T Consensus        35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            457899999999999999999999999999999765

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=95.85  E-value=0.042  Score=51.00  Aligned_cols=131  Identities=15%  Similarity=0.108  Sum_probs=83.0

Q ss_pred             CEEEEECCChHHHHHHHHHHHc-CCCEEEEEcCCchHHHH-HHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          203 STVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~-g~~~vi~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      -+|.|+|+|.+|...+..++.. +++.+.+.+++.++.+. ++++|. .++       .++.+.+.   ...+|+|+.|+
T Consensus         5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~-~~~-------~~~~~~l~---~~~~D~V~i~t   73 (344)
T 3euw_A            5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGA-EAV-------ASPDEVFA---RDDIDGIVIGS   73 (344)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTC-EEE-------SSHHHHTT---CSCCCEEEECS
T ss_pred             eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCC-cee-------CCHHHHhc---CCCCCEEEEeC
Confidence            3689999999999888777765 66334467888887665 456773 333       22333222   12699999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEccCCCCCccccCH------HHHH-hcCcEEEEeeccCCCccccHHHHHHHHHcCCcc
Q 018022          281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS------FEVL-HSGKILMGSLFGGLKAKSDIPILLKRYMDKWSY  353 (362)
Q Consensus       281 g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~------~~~~-~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~  353 (362)
                      ......+.+..++..  |+-+++-.+     +..+.      ..+. .+++.+.-.+...+  ...+..+.+++++|+|-
T Consensus        74 p~~~h~~~~~~al~~--gk~v~~EKP-----~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~--~p~~~~~k~~i~~g~iG  144 (344)
T 3euw_A           74 PTSTHVDLITRAVER--GIPALCEKP-----IDLDIEMVRACKEKIGDGASKVMLGFNRRF--DPSFAAINARVANQEIG  144 (344)
T ss_dssp             CGGGHHHHHHHHHHT--TCCEEECSC-----SCSCHHHHHHHHHHHGGGGGGEEECCGGGG--CHHHHHHHHHHHTTTTS
T ss_pred             CchhhHHHHHHHHHc--CCcEEEECC-----CCCCHHHHHHHHHHHHhcCCeEEecchhhc--CHHHHHHHHHHhcCCCC
Confidence            988878888888887  466776542     22222      1222 23444433332222  36688888999998774

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=95.85  E-value=0.0084  Score=52.71  Aligned_cols=97  Identities=13%  Similarity=0.134  Sum_probs=66.6

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC----Cc-EEEcCCCCCCccHHHHHHhhcCCCc
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG----VT-EFVNSKNCGDKSVSQIIIDMTDGGA  273 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g----~~-~vv~~~~~~~~~~~~~i~~~~~~g~  273 (362)
                      ..+|.+||-+|+|. |..+..+++..+. ++++++.+++-++.+++..    .. .++.      .++.+.+..+..+.|
T Consensus        58 ~~~G~rVLdiG~G~-G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~------~~a~~~~~~~~~~~F  129 (236)
T 3orh_A           58 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK------GLWEDVAPTLPDGHF  129 (236)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE------SCHHHHGGGSCTTCE
T ss_pred             ccCCCeEEEECCCc-cHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEe------ehHHhhcccccccCC
Confidence            47899999999874 7777778776665 8999999999888887632    22 2222      223333334444479


Q ss_pred             cEE-EEcCCC----------HHHHHHHHHHhccCCceEEEEc
Q 018022          274 DYC-FECVGL----------ASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       274 d~v-id~~g~----------~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      |.| +|++..          ...+.++.+.|+|+ |+++++.
T Consensus       130 D~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPG-G~l~f~~  170 (236)
T 3orh_A          130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYCN  170 (236)
T ss_dssp             EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEECC
T ss_pred             ceEEEeeeecccchhhhcchhhhhhhhhheeCCC-CEEEEEe
Confidence            887 454432          13467789999998 9999874

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=95.85  E-value=0.034  Score=50.80  Aligned_cols=101  Identities=19%  Similarity=0.272  Sum_probs=70.1

Q ss_pred             HHhcC-CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc---EEEcCCCCCCccHHHHH
Q 018022          194 WRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQII  265 (362)
Q Consensus       194 ~~~~~-~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~~~i  265 (362)
                      .+... ++++++||-+|+|. |..+..+++..+. +|++++.+++.++.+++    .|..   .++..+-   .++    
T Consensus       109 ~~~l~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~----  179 (312)
T 3vc1_A          109 MDHLGQAGPDDTLVDAGCGR-GGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNM---LDT----  179 (312)
T ss_dssp             HTTSCCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSC----
T ss_pred             HHHhccCCCCCEEEEecCCC-CHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh---hcC----
Confidence            34444 78999999999875 7777788887787 99999999998877764    3432   2332222   111    


Q ss_pred             HhhcCCCccEEEEc-----CCCHHHHHHHHHHhccCCceEEEEcc
Q 018022          266 IDMTDGGADYCFEC-----VGLASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       266 ~~~~~~g~d~vid~-----~g~~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                       .+..+.||+|+..     .+-...+..+.+.|+++ |++++...
T Consensus       180 -~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  222 (312)
T 3vc1_A          180 -PFDKGAVTASWNNESTMYVDLHDLFSEHSRFLKVG-GRYVTITG  222 (312)
T ss_dssp             -CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             -CCCCCCEeEEEECCchhhCCHHHHHHHHHHHcCCC-cEEEEEEc
Confidence             0122379999873     23346688999999998 99988754

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.83  E-value=0.079  Score=47.00  Aligned_cols=34  Identities=29%  Similarity=0.330  Sum_probs=30.6

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      +.+|+|+|+|++|..++..+.+.|+.++..+|.+
T Consensus        28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            5789999999999999999999999899998754

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=95.83  E-value=0.045  Score=48.41  Aligned_cols=99  Identities=17%  Similarity=0.270  Sum_probs=67.5

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHc--CCCEEEEEcCCchHHHHHHh----cCCc---EEEcCCCCCCccHHHHHHh
Q 018022          197 ANVEVGSTVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIID  267 (362)
Q Consensus       197 ~~~~~g~~vlI~Gag~~G~~a~~la~~~--g~~~vi~~~~~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~~~i~~  267 (362)
                      ....++.+||-+|+|. |..++.+++..  +. +|++++.+++..+.+++    .|..   .++.      .+..+.+..
T Consensus        75 ~~~~~~~~VLeiG~G~-G~~~~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~------gda~~~l~~  146 (247)
T 1sui_A           75 LKLINAKNTMEIGVYT-GYSLLATALAIPEDG-KILAMDINKENYELGLPVIKKAGVDHKIDFRE------GPALPVLDE  146 (247)
T ss_dssp             HHHTTCCEEEEECCGG-GHHHHHHHHHSCTTC-EEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE------SCHHHHHHH
T ss_pred             HHhhCcCEEEEeCCCc-CHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEE------CCHHHHHHH
Confidence            3445678999999864 77777888876  45 99999999998887764    4542   2332      233333333


Q ss_pred             hc-----CCCccEEEEcCCC---HHHHHHHHHHhccCCceEEEEc
Q 018022          268 MT-----DGGADYCFECVGL---ASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       268 ~~-----~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      +.     .+.||.||-....   ...++.+.+.|+++ |.+++-.
T Consensus       147 l~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~d~  190 (247)
T 1sui_A          147 MIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDN  190 (247)
T ss_dssp             HHHSGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEEC
T ss_pred             HHhccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCC-eEEEEec
Confidence            31     3479999865433   34577899999998 9988653

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=95.83  E-value=0.031  Score=48.26  Aligned_cols=97  Identities=21%  Similarity=0.232  Sum_probs=67.8

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHh----cC-----C--cEEEcCCCCCCccHHHHH
Q 018022          198 NVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FG-----V--TEFVNSKNCGDKSVSQII  265 (362)
Q Consensus       198 ~~~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~g-----~--~~vv~~~~~~~~~~~~~i  265 (362)
                      .++++++||-+|+|. |..+..+++..|. .+|++++.+++.++.+++    .+     .  -.++..+.      .+..
T Consensus        74 ~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~------~~~~  146 (226)
T 1i1n_A           74 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDG------RMGY  146 (226)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCG------GGCC
T ss_pred             hCCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCc------ccCc
Confidence            378999999999976 8888888887763 299999999998877754    22     1  12332221      1000


Q ss_pred             HhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEc
Q 018022          266 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       266 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                        ...+.||+|+........+..+.+.|+++ |++++.-
T Consensus       147 --~~~~~fD~i~~~~~~~~~~~~~~~~Lkpg-G~lv~~~  182 (226)
T 1i1n_A          147 --AEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILPV  182 (226)
T ss_dssp             --GGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             --ccCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEE
Confidence              11237999998877666678899999998 9988753

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=95.83  E-value=0.022  Score=49.42  Aligned_cols=101  Identities=14%  Similarity=0.208  Sum_probs=70.6

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc----CCcEEEcCCCCCCccHHHHHHhh
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~~i~~~  268 (362)
                      +.....+.++++||-+|+|. |..+..+++.. . +|++++.+++.++.+++.    +...++..+.      .+.+  .
T Consensus        62 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~-~-~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~------~~~~--~  130 (231)
T 1vbf_A           62 MLDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILGDG------TLGY--E  130 (231)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEESCG------GGCC--G
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHHc-C-EEEEEeCCHHHHHHHHHHHhhcCCeEEEECCc------cccc--c
Confidence            44666788999999999976 77777887764 4 999999999988888763    2122333221      1100  0


Q ss_pred             cCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEcc
Q 018022          269 TDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       269 ~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ..+.||+|+....-......+.+.|+++ |++++.-.
T Consensus       131 ~~~~fD~v~~~~~~~~~~~~~~~~L~pg-G~l~~~~~  166 (231)
T 1vbf_A          131 EEKPYDRVVVWATAPTLLCKPYEQLKEG-GIMILPIG  166 (231)
T ss_dssp             GGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEEC
T ss_pred             cCCCccEEEECCcHHHHHHHHHHHcCCC-cEEEEEEc
Confidence            1237999998766555456888999998 99887643

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=95.82  E-value=0.031  Score=51.38  Aligned_cols=101  Identities=13%  Similarity=0.139  Sum_probs=60.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHH----HHHh-cCC-cEEEcCCCCCCccHHHHHHhhcCCCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE----IGKR-FGV-TEFVNSKNCGDKSVSQIIIDMTDGGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~----~~~~-~g~-~~vv~~~~~~~~~~~~~i~~~~~~g~  273 (362)
                      .+.+|||+|+ |.+|...++.+...|+ +|++++++.++..    .+.+ .+. ..++..+-.+.+.+.+.+.+   +++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~   79 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA---HPI   79 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH---SCC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc---cCC
Confidence            4568999998 9999999999999999 9999988665432    2221 121 23332221011222222222   279


Q ss_pred             cEEEEcCCCHH-----------------HHHHHHHHhccC-CceEEEEcc
Q 018022          274 DYCFECVGLAS-----------------LVQEAYACCRKG-WGKTIVLGV  305 (362)
Q Consensus       274 d~vid~~g~~~-----------------~~~~~~~~l~~~-~G~iv~~G~  305 (362)
                      |+||.+.+...                 ....+++.++.. .+++++++.
T Consensus        80 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS  129 (341)
T 3enk_A           80 TAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS  129 (341)
T ss_dssp             CEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             cEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence            99999998521                 122344555443 158888864

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=95.81  E-value=0.024  Score=50.73  Aligned_cols=95  Identities=15%  Similarity=0.083  Sum_probs=62.6

Q ss_pred             EEEEECC-ChHHHHHHHHHHHc--CCCEEEEEcCCchHHHHHHhcCCcEEE-cCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          204 TVVIFGL-GSIGLAVAEGARLC--GATRIIGVDVISEKFEIGKRFGVTEFV-NSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~--g~~~vi~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      +|||+|+ |.+|...++.+...  |+ +|++++++.++.+.+...+...+. |..+      .+.+.+... ++|+||.+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~d------~~~l~~~~~-~~d~vi~~   73 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNVEKASTLADQGVEVRHGDYNQ------PESLQKAFA-GVSKLLFI   73 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTTHHHHHTTCEEEECCTTC------HHHHHHHTT-TCSEEEEC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCHHHHhHHhhcCCeEEEeccCC------HHHHHHHHh-cCCEEEEc
Confidence            5899998 99999999888877  88 899999888776665554544332 2222      234444443 59999999


Q ss_pred             CCCH-------HHHHHHHHHhccCC-ceEEEEccC
Q 018022          280 VGLA-------SLVQEAYACCRKGW-GKTIVLGVD  306 (362)
Q Consensus       280 ~g~~-------~~~~~~~~~l~~~~-G~iv~~G~~  306 (362)
                      .+..       .....+++.++..+ ++++.++..
T Consensus        74 a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~  108 (287)
T 2jl1_A           74 SGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYA  108 (287)
T ss_dssp             CCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred             CCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence            8841       12334555555431 378888753

>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}

Probab=95.81  E-value=0.072  Score=48.97  Aligned_cols=138  Identities=15%  Similarity=0.056  Sum_probs=85.9

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhc---CCCccEEEE
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT---DGGADYCFE  278 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~---~~g~d~vid  278 (362)
                      -+|.|+|+ |.+|...+...+..+.+.+.+.++++++....+.++...++..-    +++.+.+.++.   ...+|+|+.
T Consensus         4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~----~~ll~~~~~l~~~~~~~vD~V~I   79 (318)
T 3oa2_A            4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEF----EFFLDHASNLKRDSATALDYVSI   79 (318)
T ss_dssp             CEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESSH----HHHHHHHHHHTTSTTTSCCEEEE
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCcEECCH----HHHHHhhhhhhhccCCCCcEEEE
Confidence            36889999 67999888888877885566667666664444445444444211    12322222332   348999999


Q ss_pred             cCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHH------H-HhcCcEEEEeeccCCCccccHHHHHHHHHcCC
Q 018022          279 CVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFE------V-LHSGKILMGSLFGGLKAKSDIPILLKRYMDKW  351 (362)
Q Consensus       279 ~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~------~-~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~  351 (362)
                      +++.....+.+..+++.  |+-|++-.     ++..+..+      + -.++..+.-.+...  ....+..+.+++++|.
T Consensus        80 ~tP~~~H~~~~~~al~a--GkhVl~EK-----Pla~~~~ea~~l~~~a~~~g~~~~v~~~~R--~~p~~~~~k~~i~~g~  150 (318)
T 3oa2_A           80 CSPNYLHYPHIAAGLRL--GCDVICEK-----PLVPTPEMLDQLAVIERETDKRLYNILQLR--HHQAIIALKDKVAREK  150 (318)
T ss_dssp             CSCGGGHHHHHHHHHHT--TCEEEECS-----SCCSCHHHHHHHHHHHHHHTCCEEECCGGG--GCHHHHHHHHHHHHS-
T ss_pred             CCCcHHHHHHHHHHHHC--CCeEEEEC-----CCcCCHHHHHHHHHHHHHhCCEEEEEEhhh--cCHHHHHHHHHHhcCC
Confidence            99988778899999988  57788854     23333322      2 22455543333222  2366788888888886


Q ss_pred             cc
Q 018022          352 SY  353 (362)
Q Consensus       352 l~  353 (362)
                      |-
T Consensus       151 iG  152 (318)
T 3oa2_A          151 SP  152 (318)
T ss_dssp             CS
T ss_pred             CC
Confidence            63

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=95.81  E-value=0.074  Score=48.70  Aligned_cols=76  Identities=21%  Similarity=0.239  Sum_probs=49.1

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHH--HHHHhcCC---cEEEcCCCCCCccHHHHHHhhcCC-Ccc
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKF--EIGKRFGV---TEFVNSKNCGDKSVSQIIIDMTDG-GAD  274 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~--~~~~~~g~---~~vv~~~~~~~~~~~~~i~~~~~~-g~d  274 (362)
                      +.+|||+|+ |.+|...++.+...|+ +|++++++.++.  +.++.++.   .+++..+-   .+ .+.+.++..+ ++|
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl---~d-~~~~~~~~~~~~~d   77 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRRSGEFASWRLKELGIENDVKIIHMDL---LE-FSNIIRTIEKVQPD   77 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCCSTTTTHHHHHTTCTTTEEECCCCT---TC-HHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccccccHhhccccCceeEEECCC---CC-HHHHHHHHHhcCCC
Confidence            568999998 9999999998888998 999999887643  23444421   12222111   11 1223332222 589


Q ss_pred             EEEEcCCC
Q 018022          275 YCFECVGL  282 (362)
Q Consensus       275 ~vid~~g~  282 (362)
                      +||.+.|.
T Consensus        78 ~vih~A~~   85 (345)
T 2z1m_A           78 EVYNLAAQ   85 (345)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=95.80  E-value=0.023  Score=50.77  Aligned_cols=96  Identities=11%  Similarity=0.084  Sum_probs=60.7

Q ss_pred             EEEEECC-ChHHHHHHHHHHHc--CCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          204 TVVIFGL-GSIGLAVAEGARLC--GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~--g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      +|||+|+ |.+|...++.+...  |+ +|++++++.++.+.+...+... +..+-   .+ .+.+.+... ++|+||.+.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~D~---~d-~~~~~~~~~-~~d~vi~~a   73 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRNPAKAQALAAQGITV-RQADY---GD-EAALTSALQ-GVEKLLLIS   73 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTCHHHHHTTCEE-EECCT---TC-HHHHHHHTT-TCSEEEECC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcChHhhhhhhcCCCeE-EEcCC---CC-HHHHHHHHh-CCCEEEEeC
Confidence            4899998 99999999888877  88 8999998887766555555443 32221   11 234444443 589999998


Q ss_pred             CCH-----HHHHHHHHHhccC-CceEEEEccC
Q 018022          281 GLA-----SLVQEAYACCRKG-WGKTIVLGVD  306 (362)
Q Consensus       281 g~~-----~~~~~~~~~l~~~-~G~iv~~G~~  306 (362)
                      +..     .....+++.++.. -++++.++..
T Consensus        74 ~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~  105 (286)
T 2zcu_A           74 SSEVGQRAPQHRNVINAAKAAGVKFIAYTSLL  105 (286)
T ss_dssp             --------CHHHHHHHHHHHHTCCEEEEEEET
T ss_pred             CCCchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence            752     1234455555443 1478888753

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=95.76  E-value=0.045  Score=48.15  Aligned_cols=104  Identities=17%  Similarity=0.167  Sum_probs=61.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEE-cCCchHHHHH----HhcCCcE-EEcCCCCCCccHHHHHHhh---c-
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFEIG----KRFGVTE-FVNSKNCGDKSVSQIIIDM---T-  269 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~-~~~~~~~~~~----~~~g~~~-vv~~~~~~~~~~~~~i~~~---~-  269 (362)
                      .+.++||+|+ +++|.+.++.+...|+ +|+++ .++.++.+.+    ++.+... ++..+-.+..+..+.+.++   . 
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            5788999998 9999999999999999 77664 6666655433    2334322 2222210012222222221   1 


Q ss_pred             ---C-CCccEEEEcCCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          270 ---D-GGADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       270 ---~-~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                         . +.+|++|.+.|..                         ...+.++..++++ |+|++++..
T Consensus        85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~iv~isS~  149 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN-SRIINISSA  149 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE-EEEEEECCG
T ss_pred             ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCC-CEEEEeCCh
Confidence               1 2499999998852                         1123344455566 899999764

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=95.76  E-value=0.036  Score=52.10  Aligned_cols=87  Identities=25%  Similarity=0.382  Sum_probs=60.4

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++. +.+.+.+.|+..         .++.+.+.     ..|+|+-++
T Consensus       175 ~gktvGIIGlG~IG~~vA~~l~~fG~-~V~~~d~~~-~~~~~~~~g~~~---------~~l~ell~-----~aDvV~l~~  238 (365)
T 4hy3_A          175 AGSEIGIVGFGDLGKALRRVLSGFRA-RIRVFDPWL-PRSMLEENGVEP---------ASLEDVLT-----KSDFIFVVA  238 (365)
T ss_dssp             SSSEEEEECCSHHHHHHHHHHTTSCC-EEEEECSSS-CHHHHHHTTCEE---------CCHHHHHH-----SCSEEEECS
T ss_pred             CCCEEEEecCCcccHHHHHhhhhCCC-EEEEECCCC-CHHHHhhcCeee---------CCHHHHHh-----cCCEEEEcC
Confidence            37899999999999999999999999 999999875 444555666532         12333332     367777766


Q ss_pred             CCH----HHH-HHHHHHhccCCceEEEEc
Q 018022          281 GLA----SLV-QEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       281 g~~----~~~-~~~~~~l~~~~G~iv~~G  304 (362)
                      +..    ..+ ...+..|+++ +.++.++
T Consensus       239 Plt~~T~~li~~~~l~~mk~g-ailIN~a  266 (365)
T 4hy3_A          239 AVTSENKRFLGAEAFSSMRRG-AAFILLS  266 (365)
T ss_dssp             CSSCC---CCCHHHHHTSCTT-CEEEECS
T ss_pred             cCCHHHHhhcCHHHHhcCCCC-cEEEECc
Confidence            643    112 3566677776 7777776

>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}

Probab=95.74  E-value=0.075  Score=49.78  Aligned_cols=132  Identities=14%  Similarity=0.055  Sum_probs=85.1

Q ss_pred             EEEEECCChHHHHHHHHHHHc--------CCCEEEEEcCCchHHHH-HHhcCCcEEEcCCCCCCccHHHHHHhhcCCCcc
Q 018022          204 TVVIFGLGSIGLAVAEGARLC--------GATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGAD  274 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~--------g~~~vi~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d  274 (362)
                      +|.|+|+|.+|...+...+..        +++-+.+.+++.++.+. ++++|...+..       ++.+.+.   ...+|
T Consensus         8 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~-------d~~~ll~---~~~iD   77 (390)
T 4h3v_A            8 GIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTET-------DWRTLLE---RDDVQ   77 (390)
T ss_dssp             EEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEES-------CHHHHTT---CTTCS
T ss_pred             cEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccC-------CHHHHhc---CCCCC
Confidence            678999999998776655543        23345556777777655 56788776542       3333222   22799


Q ss_pred             EEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHH---H---Hh----cCcEEEEeeccCCCccccHHHHH
Q 018022          275 YCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFE---V---LH----SGKILMGSLFGGLKAKSDIPILL  344 (362)
Q Consensus       275 ~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~---~---~~----~~~~i~g~~~~~~~~~~~l~~~l  344 (362)
                      +|+.|+......+.+..+|+.  |+-|++-.+     +..+..+   +   ..    +++.+.-.+...+  ...+..+.
T Consensus        78 aV~I~tP~~~H~~~~~~al~a--GkhVl~EKP-----la~t~~ea~~l~~~~~~~~~~g~~~~v~~~~R~--~p~~~~~k  148 (390)
T 4h3v_A           78 LVDVCTPGDSHAEIAIAALEA--GKHVLCEKP-----LANTVAEAEAMAAAAAKAAAGGIRSMVGFTYRR--VPAIALAR  148 (390)
T ss_dssp             EEEECSCGGGHHHHHHHHHHT--TCEEEEESS-----SCSSHHHHHHHHHHHHHHHHTTCCEEEECGGGG--SHHHHHHH
T ss_pred             EEEEeCChHHHHHHHHHHHHc--CCCceeecC-----cccchhHHHHHHHHHHHHHhcCCceEEEeeecc--CchHHHHH
Confidence            999999998879999999998  588888543     3333322   1   21    3444433333322  35688889


Q ss_pred             HHHHcCCccc
Q 018022          345 KRYMDKWSYV  354 (362)
Q Consensus       345 ~~~~~g~l~~  354 (362)
                      +++++|+|--
T Consensus       149 ~~i~~g~iG~  158 (390)
T 4h3v_A          149 KLVADGKIGT  158 (390)
T ss_dssp             HHHHTTSSCS
T ss_pred             HHHHcCCCCc
Confidence            9999988743

>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*

Probab=95.73  E-value=0.14  Score=46.84  Aligned_cols=135  Identities=16%  Similarity=0.162  Sum_probs=85.2

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhh--cCCCccEEEEc
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM--TDGGADYCFEC  279 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~--~~~g~d~vid~  279 (362)
                      -+|.|+|+ |.+|...+...+..+.+.+.+.++++++....+.++...++..-    +++.+.+.++  ....+|+|+.|
T Consensus         4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~----~~ll~~~~~l~~~~~~vD~V~I~   79 (312)
T 3o9z_A            4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEP----EAFEAYLEDLRDRGEGVDYLSIA   79 (312)
T ss_dssp             CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESCH----HHHHHHHHHHHHTTCCCSEEEEC
T ss_pred             eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeCCH----HHHHHHhhhhcccCCCCcEEEEC
Confidence            36899999 67999988888888885666667777764444445444444211    1222222222  23489999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHH------H-HhcCcEEEEeeccCCCccccHHHHHHHHHcC
Q 018022          280 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFE------V-LHSGKILMGSLFGGLKAKSDIPILLKRYMDK  350 (362)
Q Consensus       280 ~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~------~-~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g  350 (362)
                      ++.....+.+..+++.  |+-|++-.     ++..+..+      + -.++..+.-.+...  ....+..+.+++++|
T Consensus        80 tP~~~H~~~~~~al~a--GkhVl~EK-----Pla~~~~ea~~l~~~a~~~g~~~~v~~~~R--~~p~~~~~k~~i~~g  148 (312)
T 3o9z_A           80 SPNHLHYPQIRMALRL--GANALSEK-----PLVLWPEEIARLKELEARTGRRVYTVLQLR--VHPSLLALKERLGQE  148 (312)
T ss_dssp             SCGGGHHHHHHHHHHT--TCEEEECS-----SSCSCHHHHHHHHHHHHHHCCCEEECCGGG--GCHHHHHHHHHHHTC
T ss_pred             CCchhhHHHHHHHHHC--CCeEEEEC-----CCCCCHHHHHHHHHHHHHcCCEEEEEeehh--cCHHHHHHHHHHHcC
Confidence            9998878899999998  57788754     23333322      2 23455554333222  236678888888887

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=95.73  E-value=0.024  Score=50.69  Aligned_cols=82  Identities=17%  Similarity=0.105  Sum_probs=51.3

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEE-cCCchHHHHHH----hcCCcE-EEcCCCCCCccHHHHHHhhcC--
Q 018022          200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFEIGK----RFGVTE-FVNSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~-~~~~~~~~~~~----~~g~~~-vv~~~~~~~~~~~~~i~~~~~--  270 (362)
                      ..+.++||+|+ |++|.+.++.+...|+ +|+++ .++.++.+.+.    +.+... ++..+-.+.+++.+.+.+...  
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGW-RVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            45788999998 9999999999999999 77665 77776655433    234322 222221011233333333321  


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +++|++|.+.|.
T Consensus       103 g~id~li~nAg~  114 (272)
T 4e3z_A          103 GRLDGLVNNAGI  114 (272)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            269999999883

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=95.72  E-value=0.065  Score=46.80  Aligned_cols=94  Identities=21%  Similarity=0.323  Sum_probs=56.3

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      .+|||+|+ |.+|...+..+...|+ +|++++++.++.+.  .+..    |-.+  .+.+.+.+.++ .+++|++|.+.|
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~--~~~~----D~~~--~~~~~~~~~~~-~~~~d~vi~~Ag   71 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGH-TVIGIDRGQADIEA--DLST----PGGR--ETAVAAVLDRC-GGVLDGLVCCAG   71 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC--CTTS----HHHH--HHHHHHHHHHH-TTCCSEEEECCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCChhHccc--cccC----Cccc--HHHHHHHHHHc-CCCccEEEECCC
Confidence            36899998 9999999998888999 89999987654321  0000    0000  01122223222 247999999887


Q ss_pred             CHH------------------HHHHHHHHhccC-CceEEEEccC
Q 018022          282 LAS------------------LVQEAYACCRKG-WGKTIVLGVD  306 (362)
Q Consensus       282 ~~~------------------~~~~~~~~l~~~-~G~iv~~G~~  306 (362)
                      ...                  .++.+.+.++.. .++++.++..
T Consensus        72 ~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~  115 (255)
T 2dkn_A           72 VGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSI  115 (255)
T ss_dssp             CCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred             CCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecc
Confidence            421                  123344444332 2789988753

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=95.71  E-value=0.066  Score=49.85  Aligned_cols=91  Identities=11%  Similarity=0.100  Sum_probs=64.0

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  282 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~  282 (362)
                      .+|.|+|.|.+|.+.+..++..|. +|++.++++++.+.+.+.|+...        .++.+.+.+.. ...|+||-|+..
T Consensus         9 ~kIgIIG~G~mG~slA~~L~~~G~-~V~~~dr~~~~~~~a~~~G~~~~--------~~~~e~~~~a~-~~aDlVilavP~   78 (341)
T 3ktd_A            9 RPVCILGLGLIGGSLLRDLHAANH-SVFGYNRSRSGAKSAVDEGFDVS--------ADLEATLQRAA-AEDALIVLAVPM   78 (341)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHTTCCEE--------SCHHHHHHHHH-HTTCEEEECSCH
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeee--------CCHHHHHHhcc-cCCCEEEEeCCH
Confidence            579999999999999999999998 99999999999999999987431        22334443320 147999999996


Q ss_pred             HHHHHHHHH---HhccCCceEEEEcc
Q 018022          283 ASLVQEAYA---CCRKGWGKTIVLGV  305 (362)
Q Consensus       283 ~~~~~~~~~---~l~~~~G~iv~~G~  305 (362)
                      .. +...+.   .++++ ..++.++.
T Consensus        79 ~~-~~~vl~~l~~~~~~-~iv~Dv~S  102 (341)
T 3ktd_A           79 TA-IDSLLDAVHTHAPN-NGFTDVVS  102 (341)
T ss_dssp             HH-HHHHHHHHHHHCTT-CCEEECCS
T ss_pred             HH-HHHHHHHHHccCCC-CEEEEcCC
Confidence            53 333332   23554 45556654

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=95.70  E-value=0.024  Score=49.52  Aligned_cols=79  Identities=20%  Similarity=0.188  Sum_probs=49.7

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEE-cCCchHHHHHH----hcCCc-EE-EcCCCCCCccHHHHHHhhcC--CC
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFEIGK----RFGVT-EF-VNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~-~~~~~~~~~~~----~~g~~-~v-v~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      .++||+|+ |.+|.+.++.+...|+ +|+++ +++.++.+.+.    +.+.. .. +..+-.+.+.+.+.+.+...  ++
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGF-ALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            57999998 9999999999999999 88887 88877665432    22332 22 32221011223333332211  36


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|.+.|.
T Consensus        81 ~d~li~~Ag~   90 (245)
T 2ph3_A           81 LDTLVNNAGI   90 (245)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=95.70  E-value=0.067  Score=48.33  Aligned_cols=74  Identities=23%  Similarity=0.223  Sum_probs=54.9

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCH
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  283 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~  283 (362)
                      +|.|+|+|.+|...+..+...|. +|++.++++++.+.+.+.|...   .     .+..+.+.     ..|+||.|+..+
T Consensus         2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~-----~~~~~~~~-----~~Dvvi~~vp~~   67 (296)
T 2gf2_A            2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDVFPDACKEFQDAGEQV---V-----SSPADVAE-----KADRIITMLPTS   67 (296)
T ss_dssp             CEEEECCSTTHHHHHHHHHHTTC-CEEEECSSTHHHHHHHTTTCEE---C-----SSHHHHHH-----HCSEEEECCSSH
T ss_pred             eEEEEeccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCee---c-----CCHHHHHh-----cCCEEEEeCCCH
Confidence            47899999999998888888898 8999999999988887766431   1     22333333     379999998776


Q ss_pred             HHHHHHHH
Q 018022          284 SLVQEAYA  291 (362)
Q Consensus       284 ~~~~~~~~  291 (362)
                      ..+...+.
T Consensus        68 ~~~~~v~~   75 (296)
T 2gf2_A           68 INAIEAYS   75 (296)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            55666554

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=95.69  E-value=0.09  Score=45.28  Aligned_cols=75  Identities=13%  Similarity=0.080  Sum_probs=55.4

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  282 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~  282 (362)
                      +|+|.|+|.+|...++.+...|. .|+++++++++.+.+. +.+.. ++..+.   .+ .+.+.+..-..+|++|-+++.
T Consensus         2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~~~~-~i~gd~---~~-~~~l~~a~i~~ad~vi~~~~~   75 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKLKAT-IIHGDG---SH-KEILRDAEVSKNDVVVILTPR   75 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHSSSE-EEESCT---TS-HHHHHHHTCCTTCEEEECCSC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHcCCe-EEEcCC---CC-HHHHHhcCcccCCEEEEecCC
Confidence            58899999999999999999999 9999999999988765 46654 333322   11 233444322279999999998


Q ss_pred             HH
Q 018022          283 AS  284 (362)
Q Consensus       283 ~~  284 (362)
                      ..
T Consensus        76 d~   77 (218)
T 3l4b_C           76 DE   77 (218)
T ss_dssp             HH
T ss_pred             cH
Confidence            75

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=95.68  E-value=0.031  Score=51.42  Aligned_cols=82  Identities=23%  Similarity=0.275  Sum_probs=51.5

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC----------chHHHH----HHhcCCcEEEcCCCCC-CccHHH
Q 018022          200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI----------SEKFEI----GKRFGVTEFVNSKNCG-DKSVSQ  263 (362)
Q Consensus       200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~----------~~~~~~----~~~~g~~~vv~~~~~~-~~~~~~  263 (362)
                      -.+.++||+|+ +++|.+.++.+...|+ +|++++++          .++.+.    +++.+....+..-+.. .+++.+
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  103 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG  103 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            35789999988 9999999999999999 99999876          333332    3334543322221111 122323


Q ss_pred             HHHhhcC--CCccEEEEcCCC
Q 018022          264 IIIDMTD--GGADYCFECVGL  282 (362)
Q Consensus       264 ~i~~~~~--~g~d~vid~~g~  282 (362)
                      .+.+...  +++|++|.+.|.
T Consensus       104 ~~~~~~~~~g~iD~lv~nAg~  124 (322)
T 3qlj_A          104 LIQTAVETFGGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHHHSCCCEEECCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCC
Confidence            3333221  279999999984

>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*

Probab=95.68  E-value=0.21  Score=46.14  Aligned_cols=131  Identities=15%  Similarity=0.121  Sum_probs=84.0

Q ss_pred             EEEEECCChHHHHHHHHHH-H-cCCCEEEEEcCCchHHHH-HHhcCC-cEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          204 TVVIFGLGSIGLAVAEGAR-L-CGATRIIGVDVISEKFEI-GKRFGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~-~-~g~~~vi~~~~~~~~~~~-~~~~g~-~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      +|.|+|+|.+|...+..++ . -+++.+.+.+++.++.+. ++++|. ..++       .++.+.+.+   ..+|+|+.|
T Consensus         4 rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~-------~~~~~ll~~---~~~D~V~i~   73 (344)
T 3mz0_A            4 RIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVY-------PNDDSLLAD---ENVDAVLVT   73 (344)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEE-------SSHHHHHHC---TTCCEEEEC
T ss_pred             EEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeee-------CCHHHHhcC---CCCCEEEEC
Confidence            6889999999998877776 4 466344467888777665 456774 3333       234444432   269999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH------HH-HhcCcEE--EEeeccCCCccccHHHHHHHHHcC
Q 018022          280 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF------EV-LHSGKIL--MGSLFGGLKAKSDIPILLKRYMDK  350 (362)
Q Consensus       280 ~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~------~~-~~~~~~i--~g~~~~~~~~~~~l~~~l~~~~~g  350 (362)
                      +......+.+..+++.  |+-+++-.     ++..+..      .+ ..++..+  .++. ..  ....+..+.+++++|
T Consensus        74 tp~~~h~~~~~~al~~--Gk~vl~EK-----P~a~~~~e~~~l~~~a~~~g~~~~~v~~~-~r--~~p~~~~~k~~i~~g  143 (344)
T 3mz0_A           74 SWGPAHESSVLKAIKA--QKYVFCEK-----PLATTAEGCMRIVEEEIKVGKRLVQVGFM-RR--YDSGYVQLKEALDNH  143 (344)
T ss_dssp             SCGGGHHHHHHHHHHT--TCEEEECS-----CSCSSHHHHHHHHHHHHHHSSCCEEECCG-GG--GSHHHHHHHHHHHTT
T ss_pred             CCchhHHHHHHHHHHC--CCcEEEcC-----CCCCCHHHHHHHHHHHHHHCCEEEEEecc-cc--cCHHHHHHHHHHHcC
Confidence            9988778888888887  57777743     2333322      22 2235544  3432 22  236688888999998


Q ss_pred             Cccc
Q 018022          351 WSYV  354 (362)
Q Consensus       351 ~l~~  354 (362)
                      +|--
T Consensus       144 ~iG~  147 (344)
T 3mz0_A          144 VIGE  147 (344)
T ss_dssp             TTSS
T ss_pred             CCCC
Confidence            7743

>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}

Probab=95.67  E-value=0.15  Score=47.39  Aligned_cols=130  Identities=15%  Similarity=0.001  Sum_probs=80.2

Q ss_pred             CEEEEECCChHHHH-HHHHHHHc-CCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          203 STVVIFGLGSIGLA-VAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       203 ~~vlI~Gag~~G~~-a~~la~~~-g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      -+|.|+|+|.+|.. .+...+.. +++-+.+.+++.++.+  ++++...++       .++.+.+.+   ..+|+|+.|+
T Consensus         8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~--~~~~~~~~~-------~~~~~ll~~---~~vD~V~i~t   75 (352)
T 3kux_A            8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVH--ADWPAIPVV-------SDPQMLFND---PSIDLIVIPT   75 (352)
T ss_dssp             EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH--TTCSSCCEE-------SCHHHHHHC---SSCCEEEECS
T ss_pred             ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHH--hhCCCCceE-------CCHHHHhcC---CCCCEEEEeC
Confidence            47899999999985 66666654 6733445666666655  333322222       234333332   3699999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH------HH-HhcCcEEEEeeccCCCccccHHHHHHHHHcCCcc
Q 018022          281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF------EV-LHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSY  353 (362)
Q Consensus       281 g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~------~~-~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~  353 (362)
                      +.....+.+..+++.  |+-|++-.+     +..+..      .+ -.++..+.-.+...+  ...+..+.+++++|+|-
T Consensus        76 p~~~H~~~~~~al~a--GkhV~~EKP-----la~~~~e~~~l~~~a~~~g~~~~v~~~~r~--~p~~~~~~~~i~~g~iG  146 (352)
T 3kux_A           76 PNDTHFPLAQSALAA--GKHVVVDKP-----FTVTLSQANALKEHADDAGLLLSVFHNRRW--DSDFLTLKTLLAEGSLG  146 (352)
T ss_dssp             CTTTHHHHHHHHHHT--TCEEEECSS-----CCSCHHHHHHHHHHHHHTTCCEEECCGGGG--CHHHHHHHHHHHHTTTC
T ss_pred             ChHHHHHHHHHHHHC--CCcEEEECC-----CcCCHHHHHHHHHHHHHcCCeEEEEeeccc--CHHHHHHHHHHhcCCCC
Confidence            988778888999988  577777542     233322      22 224555443332222  35678888888888763

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=95.66  E-value=0.051  Score=47.95  Aligned_cols=100  Identities=21%  Similarity=0.354  Sum_probs=68.1

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc----CCc--EEEcCCCCCCccHHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVT--EFVNSKNCGDKSVSQIII  266 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~----g~~--~vv~~~~~~~~~~~~~i~  266 (362)
                      +......+++.+||-+|+| .|..+..+++.. . ++++++.+++.++.+++.    +..  .++..+-   .++     
T Consensus        29 l~~~l~~~~~~~vLDiGcG-~G~~~~~l~~~~-~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~---~~l-----   97 (260)
T 1vl5_A           29 LMQIAALKGNEEVLDVATG-GGHVANAFAPFV-K-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA---EQM-----   97 (260)
T ss_dssp             HHHHHTCCSCCEEEEETCT-TCHHHHHHGGGS-S-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC----CC-----
T ss_pred             HHHHhCCCCCCEEEEEeCC-CCHHHHHHHHhC-C-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecH---HhC-----
Confidence            4455677899999999987 477776776653 4 999999999888777652    322  2332222   111     


Q ss_pred             hhcCCCccEEEEcCCC------HHHHHHHHHHhccCCceEEEEc
Q 018022          267 DMTDGGADYCFECVGL------ASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       267 ~~~~~g~d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      .+.++.||+|+....-      ...+.++.+.|+++ |++++..
T Consensus        98 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~~~~  140 (260)
T 1vl5_A           98 PFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVD  140 (260)
T ss_dssp             CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCC-CEEEEEE
Confidence            1222379999986443      35688999999998 9998864

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=95.64  E-value=0.087  Score=48.25  Aligned_cols=88  Identities=22%  Similarity=0.223  Sum_probs=60.1

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC--chHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVI--SEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~--~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .+|.|+|.|.+|...++.+...|++.|++.+++  +++.+.+++.|....        .+..+.+.     ..|+||.|+
T Consensus        25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~--------~~~~e~~~-----~aDvVi~~v   91 (312)
T 3qsg_A           25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCK--------ASVAEVAG-----ECDVIFSLV   91 (312)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEEC--------SCHHHHHH-----HCSEEEECS
T ss_pred             CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEe--------CCHHHHHh-----cCCEEEEec
Confidence            579999999999998888888887789999996  578888888775421        22333333     278888888


Q ss_pred             CCHHHH---HHHHHHhccCCceEEEEc
Q 018022          281 GLASLV---QEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       281 g~~~~~---~~~~~~l~~~~G~iv~~G  304 (362)
                      ......   ..+...++++ ..++.++
T Consensus        92 p~~~~~~~~~~l~~~l~~~-~ivvd~s  117 (312)
T 3qsg_A           92 TAQAALEVAQQAGPHLCEG-ALYADFT  117 (312)
T ss_dssp             CTTTHHHHHHHHGGGCCTT-CEEEECC
T ss_pred             CchhHHHHHHhhHhhcCCC-CEEEEcC
Confidence            876432   3344445554 4445444

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=95.63  E-value=0.027  Score=49.86  Aligned_cols=79  Identities=11%  Similarity=0.136  Sum_probs=51.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHH---cCCCEEEEEcCCchHHHHHH-hc-----CCc-EEE--cCCCCCCccHHHHHHh
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARL---CGATRIIGVDVISEKFEIGK-RF-----GVT-EFV--NSKNCGDKSVSQIIID  267 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~---~g~~~vi~~~~~~~~~~~~~-~~-----g~~-~vv--~~~~~~~~~~~~~i~~  267 (362)
                      .+.++||+|+ |++|.+.++.+..   .|+ +|++++++.++.+.+. ++     +.. ..+  |-.+  .+++.+.+.+
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~   81 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGT--EAGVQRLLSA   81 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTS--HHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCC--HHHHHHHHHH
Confidence            3568899998 9999998888877   899 9999999988765543 22     322 222  2222  2333334433


Q ss_pred             hcC----CCcc--EEEEcCCC
Q 018022          268 MTD----GGAD--YCFECVGL  282 (362)
Q Consensus       268 ~~~----~g~d--~vid~~g~  282 (362)
                      ...    +.+|  ++|.+.|.
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg~  102 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAAT  102 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCC
T ss_pred             HHhccccccCCccEEEECCcc
Confidence            322    3678  99998873

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=95.63  E-value=0.12  Score=46.66  Aligned_cols=41  Identities=20%  Similarity=0.444  Sum_probs=36.7

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR  244 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~  244 (362)
                      .+|.|+|+|.+|...++.+...|+ +|++.++++++++.+.+
T Consensus         5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKK   45 (283)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHH
Confidence            579999999999999999999999 99999999998877654

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=95.62  E-value=0.039  Score=50.84  Aligned_cols=79  Identities=22%  Similarity=0.218  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcC---------CchHHHH----HHhcCCcEEEcCCCCCCccHHHHHH
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV---------ISEKFEI----GKRFGVTEFVNSKNCGDKSVSQIII  266 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~---------~~~~~~~----~~~~g~~~vv~~~~~~~~~~~~~i~  266 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|+++++         +.++.+.    ++..+...+.|..+  ..++.+.+.
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~--~~~~~~~~~   84 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS--VEAGEKLVK   84 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC--GGGHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCC--HHHHHHHHH
Confidence            4678999998 9999999999999999 8888654         4555433    23334444555444  233333333


Q ss_pred             hhc--CCCccEEEEcCCC
Q 018022          267 DMT--DGGADYCFECVGL  282 (362)
Q Consensus       267 ~~~--~~g~d~vid~~g~  282 (362)
                      ++.  -+++|++|++.|.
T Consensus        85 ~~~~~~g~iD~lVnnAG~  102 (319)
T 1gz6_A           85 TALDTFGRIDVVVNNAGI  102 (319)
T ss_dssp             HHHHHTSCCCEEEECCCC
T ss_pred             HHHHHcCCCCEEEECCCC
Confidence            322  2379999999883

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=95.60  E-value=0.029  Score=51.77  Aligned_cols=80  Identities=19%  Similarity=0.150  Sum_probs=50.2

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC-----chHHHHHH----hcCCc-EEEcCCCCCCccHHHHHHhhcC
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI-----SEKFEIGK----RFGVT-EFVNSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~-----~~~~~~~~----~~g~~-~vv~~~~~~~~~~~~~i~~~~~  270 (362)
                      +.++||+|+ |++|.+.++.+...|+ +|+++.++     .++++.+.    +.+.. .++.-+-.+.+.+.+.+.+...
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~   83 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG   83 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            578999998 9999999999999999 89987665     33443332    23432 2222211012333344443321


Q ss_pred             --CCccEEEEcCCC
Q 018022          271 --GGADYCFECVGL  282 (362)
Q Consensus       271 --~g~d~vid~~g~  282 (362)
                        +++|++|++.|.
T Consensus        84 ~~g~iD~lVnnAG~   97 (324)
T 3u9l_A           84 EDGRIDVLIHNAGH   97 (324)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             HcCCCCEEEECCCc
Confidence              379999999983

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=95.60  E-value=0.02  Score=49.42  Aligned_cols=100  Identities=14%  Similarity=0.129  Sum_probs=68.3

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHh----cCCc---EEEcCCCCCCccHHHHHHhh
Q 018022          197 ANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       197 ~~~~~g~~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~~~i~~~  268 (362)
                      ....++.+||-+|+|. |..+..+++..+ ..+|++++.+++.++.+++    .|..   .++.      .+..+.+..+
T Consensus        60 ~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~------~d~~~~~~~~  132 (225)
T 3tr6_A           60 VKLMQAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRL------SPAKDTLAEL  132 (225)
T ss_dssp             HHHHTCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE------SCHHHHHHHH
T ss_pred             HHhhCCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe------CCHHHHHHHh
Confidence            3456788999999875 778888888763 3499999999988877764    3542   2332      2333444333


Q ss_pred             cC----CCccEEEEcCCC---HHHHHHHHHHhccCCceEEEEc
Q 018022          269 TD----GGADYCFECVGL---ASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       269 ~~----~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      ..    +.||+|+-....   ...++.+.+.|+++ |.+++-.
T Consensus       133 ~~~~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~  174 (225)
T 3tr6_A          133 IHAGQAWQYDLIYIDADKANTDLYYEESLKLLREG-GLIAVDN  174 (225)
T ss_dssp             HTTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             hhccCCCCccEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEeC
Confidence            32    479999965443   24477888999998 9998754

>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}

Probab=95.60  E-value=0.082  Score=48.73  Aligned_cols=132  Identities=11%  Similarity=0.078  Sum_probs=81.7

Q ss_pred             CEEEEECCChHHHHHHHHHHHc-CCCEEEEEcCCchHHHH-HHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          203 STVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~-g~~~vi~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      -+|.|+|+|.+|...+..++.. +++.+.+.+++.++.+. ++++|...++       .++.+.+.   ...+|+|+.++
T Consensus         6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~-------~~~~~ll~---~~~~D~V~i~t   75 (329)
T 3evn_A            6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAY-------DKLEDMLA---DESIDVIYVAT   75 (329)
T ss_dssp             EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEE-------SCHHHHHT---CTTCCEEEECS
T ss_pred             eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCccc-------CCHHHHhc---CCCCCEEEECC
Confidence            3689999999998777666654 55334455777776544 4556765333       23333332   12699999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH------HH-HhcCcEEEEeeccCCCccccHHHHHHHHHcCCcc
Q 018022          281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF------EV-LHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSY  353 (362)
Q Consensus       281 g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~------~~-~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~  353 (362)
                      +.....+.+..+++.  |+-+++-.+     +..+..      .+ -.++..+.-.+...+  ...+..+.+++++|+|-
T Consensus        76 p~~~h~~~~~~al~a--Gk~Vl~EKP-----~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~--~p~~~~~~~~i~~g~iG  146 (329)
T 3evn_A           76 INQDHYKVAKAALLA--GKHVLVEKP-----FTLTYDQANELFALAESCNLFLMEAQKSVF--IPMTQVIKKLLASGEIG  146 (329)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEEESS-----CCSSHHHHHHHHHHHHHTTCCEEEECSSCS--SHHHHHHHHHHHTTTTC
T ss_pred             CcHHHHHHHHHHHHC--CCeEEEccC-----CcCCHHHHHHHHHHHHHcCCEEEEEEcccC--CHHHHHHHHHHhCCCCC
Confidence            988778888888888  577777542     222222      22 234555543332222  36678888899988774

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=95.60  E-value=0.046  Score=50.51  Aligned_cols=131  Identities=14%  Similarity=0.023  Sum_probs=84.2

Q ss_pred             CEEEEECCChHHHHHHHHHHHc-CCCEEE-EEcCCchHHHH-HHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          203 STVVIFGLGSIGLAVAEGARLC-GATRII-GVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~-g~~~vi-~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      -+|.|+|+|.+|...+..++.. ++ .++ +.+++.++.+. ++++|...++       .++.+.+.+   ..+|+|+.|
T Consensus         6 ~~igiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~~~~-------~~~~~ll~~---~~~D~V~i~   74 (330)
T 3e9m_A            6 IRYGIMSTAQIVPRFVAGLRESAQA-EVRGIASRRLENAQKMAKELAIPVAY-------GSYEELCKD---ETIDIIYIP   74 (330)
T ss_dssp             EEEEECSCCTTHHHHHHHHHHSSSE-EEEEEBCSSSHHHHHHHHHTTCCCCB-------SSHHHHHHC---TTCSEEEEC
T ss_pred             EEEEEECchHHHHHHHHHHHhCCCc-EEEEEEeCCHHHHHHHHHHcCCCcee-------CCHHHHhcC---CCCCEEEEc
Confidence            3688999999998887777764 56 555 56777777655 4567764222       234444432   269999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH------HH-HhcCcEEEEeeccCCCccccHHHHHHHHHcCCc
Q 018022          280 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF------EV-LHSGKILMGSLFGGLKAKSDIPILLKRYMDKWS  352 (362)
Q Consensus       280 ~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~------~~-~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l  352 (362)
                      +......+.+..+++.  |+-+++-.+     +..+..      .+ -.++..+.-.+...  ....+..+.+++++|+|
T Consensus        75 tp~~~h~~~~~~al~~--gk~vl~EKP-----~~~~~~e~~~l~~~a~~~g~~~~v~~~~r--~~p~~~~~k~~i~~g~i  145 (330)
T 3e9m_A           75 TYNQGHYSAAKLALSQ--GKPVLLEKP-----FTLNAAEAEELFAIAQEQGVFLMEAQKSV--FLPITQKVKATIQEGGL  145 (330)
T ss_dssp             CCGGGHHHHHHHHHHT--TCCEEECSS-----CCSSHHHHHHHHHHHHHTTCCEEECCSGG--GCHHHHHHHHHHHTTTT
T ss_pred             CCCHHHHHHHHHHHHC--CCeEEEeCC-----CCCCHHHHHHHHHHHHHcCCeEEEEEhhh--hCHHHHHHHHHHhCCCC
Confidence            9998878888888888  466666442     222222      22 23455554333222  23668888899999887


Q ss_pred             c
Q 018022          353 Y  353 (362)
Q Consensus       353 ~  353 (362)
                      -
T Consensus       146 G  146 (330)
T 3e9m_A          146 G  146 (330)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=95.58  E-value=0.034  Score=51.94  Aligned_cols=89  Identities=22%  Similarity=0.318  Sum_probs=55.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++.++. ..+.+|+..+        .++.+.+.     ..|+|+-++
T Consensus       167 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~~--------~~l~ell~-----~aDvV~l~~  231 (347)
T 1mx3_A          167 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSDG-VERALGLQRV--------STLQDLLF-----HSDCVTLHC  231 (347)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCTT-HHHHHTCEEC--------SSHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcchh-hHhhcCCeec--------CCHHHHHh-----cCCEEEEcC
Confidence            57899999999999999999999999 999998876542 2344554321        12222222     256666655


Q ss_pred             CCHH----HH-HHHHHHhccCCceEEEEcc
Q 018022          281 GLAS----LV-QEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       281 g~~~----~~-~~~~~~l~~~~G~iv~~G~  305 (362)
                      +...    .+ ...+..|+++ ..++.++.
T Consensus       232 P~t~~t~~li~~~~l~~mk~g-ailIN~ar  260 (347)
T 1mx3_A          232 GLNEHNHHLINDFTVKQMRQG-AFLVNTAR  260 (347)
T ss_dssp             CCCTTCTTSBSHHHHTTSCTT-EEEEECSC
T ss_pred             CCCHHHHHHhHHHHHhcCCCC-CEEEECCC
Confidence            5321    12 3445556664 55555543

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=95.56  E-value=0.02  Score=49.90  Aligned_cols=102  Identities=12%  Similarity=0.143  Sum_probs=68.6

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC--c--EEEcCCCCCCccHHHHHHhhcC
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV--T--EFVNSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~--~--~vv~~~~~~~~~~~~~i~~~~~  270 (362)
                      ....++++++||-+|+|. |..+..+++..|..+|++++.+++.++.+++.-.  .  .++..+.   .+... ...+ .
T Consensus        68 ~~~~~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~---~~~~~-~~~~-~  141 (230)
T 1fbn_A           68 KVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDA---NKPQE-YANI-V  141 (230)
T ss_dssp             CCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCT---TCGGG-GTTT-S
T ss_pred             cccCCCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCC---CCccc-cccc-C
Confidence            334677899999999977 8888888888774499999999988877764211  1  2222222   11000 0011 1


Q ss_pred             CCccEEEEcCCCH----HHHHHHHHHhccCCceEEEE
Q 018022          271 GGADYCFECVGLA----SLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       271 ~g~d~vid~~g~~----~~~~~~~~~l~~~~G~iv~~  303 (362)
                      +.+|+|+..+..+    ..+..+.+.|+++ |++++.
T Consensus       142 ~~~D~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  177 (230)
T 1fbn_A          142 EKVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA  177 (230)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccEEEEEEecCChhHHHHHHHHHHHhCCCC-cEEEEE
Confidence            3699999766554    3478889999998 998885

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=95.56  E-value=0.027  Score=50.94  Aligned_cols=94  Identities=16%  Similarity=0.205  Sum_probs=65.5

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c----CC---------c--EEEcCCCCCCccHHH
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GV---------T--EFVNSKNCGDKSVSQ  263 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~----g~---------~--~vv~~~~~~~~~~~~  263 (362)
                      ..+.+||++|+|. |..+..+++. +..+|++++.+++..+.+++ +    +.         .  +++.      .+..+
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~------~D~~~  145 (281)
T 1mjf_A           74 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI------GDGFE  145 (281)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE------SCHHH
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEE------CchHH
Confidence            5678999998865 6666677777 76699999999998888875 3    21         1  2332      23334


Q ss_pred             HHHhhcCCCccEEEEcCC----------CHHHHHHHHHHhccCCceEEEEc
Q 018022          264 IIIDMTDGGADYCFECVG----------LASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       264 ~i~~~~~~g~d~vid~~g----------~~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      .+..  .+.||+|+-...          ....++.+.+.|+++ |.+++..
T Consensus       146 ~l~~--~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg-G~lv~~~  193 (281)
T 1mjf_A          146 FIKN--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQA  193 (281)
T ss_dssp             HHHH--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             Hhcc--cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            4443  347999986543          245578899999998 9988764

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=95.56  E-value=0.028  Score=50.40  Aligned_cols=101  Identities=12%  Similarity=0.040  Sum_probs=69.2

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHc--CCCEEEEEcCCchHHHHHHhc-----CCc--EEEcCCCCCCccHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISEKFEIGKRF-----GVT--EFVNSKNCGDKSVSQ  263 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~--g~~~vi~~~~~~~~~~~~~~~-----g~~--~vv~~~~~~~~~~~~  263 (362)
                      +.....++++++||-.|+|. |..+..+++..  +. +|++++.+++..+.+++.     |.+  .++..+-      .+
T Consensus       102 ~~~~~~~~~~~~VLD~G~G~-G~~~~~la~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~------~~  173 (275)
T 1yb2_A          102 IIMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKG-TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDI------AD  173 (275)
T ss_dssp             ----CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSS-EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCT------TT
T ss_pred             HHHHcCCCCcCEEEEecCCC-CHHHHHHHHHcCCCC-EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECch------hc
Confidence            34566789999999999874 77777888763  45 999999999988877652     532  2332221      11


Q ss_pred             HHHhhcCCCccEEEEcCCCH-HHHHHHHHHhccCCceEEEEcc
Q 018022          264 IIIDMTDGGADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       264 ~i~~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                         .+..+.||+|+...... ..++.+.+.|+++ |++++...
T Consensus       174 ---~~~~~~fD~Vi~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~  212 (275)
T 1yb2_A          174 ---FISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYLP  212 (275)
T ss_dssp             ---CCCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEES
T ss_pred             ---cCcCCCccEEEEcCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence               11223799999876654 5578899999998 99988753

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=95.55  E-value=0.032  Score=51.14  Aligned_cols=101  Identities=14%  Similarity=0.076  Sum_probs=62.0

Q ss_pred             CCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc-----CC-cEEE-cCCCCCCccHHHHHHhhcC
Q 018022          199 VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-----GV-TEFV-NSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       199 ~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-----g~-~~vv-~~~~~~~~~~~~~i~~~~~  270 (362)
                      ...+.+|||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+.     +. -+++ ..+-.+.+.    +.++..
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~----~~~~~~   82 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGA----YDEVIK   82 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTT----TTTTTT
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHH----HHHHHc
Confidence            345789999998 9999999999888999 999999988776544321     21 1222 211100122    222222


Q ss_pred             CCccEEEEcCCCH--------------HHHHHHHHHhcc--CCceEEEEcc
Q 018022          271 GGADYCFECVGLA--------------SLVQEAYACCRK--GWGKTIVLGV  305 (362)
Q Consensus       271 ~g~d~vid~~g~~--------------~~~~~~~~~l~~--~~G~iv~~G~  305 (362)
                       ++|+||.+.+..              .....+++.+.+  +.+++++++.
T Consensus        83 -~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS  132 (342)
T 1y1p_A           83 -GAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSS  132 (342)
T ss_dssp             -TCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECC
T ss_pred             -CCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecc
Confidence             699999998742              112234454442  1268888865

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=95.54  E-value=0.056  Score=47.13  Aligned_cols=96  Identities=15%  Similarity=0.124  Sum_probs=66.5

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEE
Q 018022          198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCF  277 (362)
Q Consensus       198 ~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vi  277 (362)
                      .++++.+||=+|+|. |..+..+++. |. +|++++.+++.++.+++.  ..++.      .+..+.+..+..+.||+|+
T Consensus        38 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~~~--~~~~~------~d~~~~~~~~~~~~fD~i~  106 (240)
T 3dli_A           38 YFKGCRRVLDIGCGR-GEFLELCKEE-GI-ESIGVDINEDMIKFCEGK--FNVVK------SDAIEYLKSLPDKYLDGVM  106 (240)
T ss_dssp             GTTTCSCEEEETCTT-THHHHHHHHH-TC-CEEEECSCHHHHHHHHTT--SEEEC------SCHHHHHHTSCTTCBSEEE
T ss_pred             hhcCCCeEEEEeCCC-CHHHHHHHhC-CC-cEEEEECCHHHHHHHHhh--cceee------ccHHHHhhhcCCCCeeEEE
Confidence            357889999999864 5555555555 77 899999999999888876  23332      2333333344445899999


Q ss_pred             EcC-----CC---HHHHHHHHHHhccCCceEEEEcc
Q 018022          278 ECV-----GL---ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       278 d~~-----g~---~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ...     +.   ...++.+.+.|+++ |.+++.-.
T Consensus       107 ~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  141 (240)
T 3dli_A          107 ISHFVEHLDPERLFELLSLCYSKMKYS-SYIVIESP  141 (240)
T ss_dssp             EESCGGGSCGGGHHHHHHHHHHHBCTT-CCEEEEEE
T ss_pred             ECCchhhCCcHHHHHHHHHHHHHcCCC-cEEEEEeC
Confidence            742     22   35578899999998 99887643

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=95.53  E-value=0.071  Score=49.48  Aligned_cols=99  Identities=18%  Similarity=0.227  Sum_probs=67.7

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc------CC----cEEEcCCCCCCccHHHHHHh
Q 018022          198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF------GV----TEFVNSKNCGDKSVSQIIID  267 (362)
Q Consensus       198 ~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~------g~----~~vv~~~~~~~~~~~~~i~~  267 (362)
                      ....+.+||.+|+|. |..+..+++..+..+|++++.+++-++.+++.      +.    -.++.      .+..+.+.+
T Consensus       117 ~~~~~~~VLdIG~G~-G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~------~D~~~~l~~  189 (334)
T 1xj5_A          117 SIPNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI------GDGVAFLKN  189 (334)
T ss_dssp             TSSCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE------SCHHHHHHT
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEE------CCHHHHHHh
Confidence            345678999998864 66667777766555999999999988887752      11    12332      334444444


Q ss_pred             hcCCCccEEEEcCC----------CHHHHHHHHHHhccCCceEEEEc
Q 018022          268 MTDGGADYCFECVG----------LASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       268 ~~~~g~d~vid~~g----------~~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      ...+.||+|+-...          ....++.+.+.|+++ |.+++-.
T Consensus       190 ~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  235 (334)
T 1xj5_A          190 AAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQA  235 (334)
T ss_dssp             SCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             ccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCC-cEEEEec
Confidence            33347999996432          245688999999998 9998863

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=95.53  E-value=0.018  Score=51.56  Aligned_cols=100  Identities=13%  Similarity=0.069  Sum_probs=61.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhc--CCCccEEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT--DGGADYCF  277 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~--~~g~d~vi  277 (362)
                      .|+++||+|+ +++|++.++.+...|+ +|+++++++++. ..+.+  ....|-.+  .++....+.+..  -|++|+++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~-~~~~~--~~~~Dv~~--~~~v~~~~~~~~~~~G~iDilV   83 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARPEG-LPEEL--FVEADLTT--KEGCAIVAEATRQRLGGVDVIV   83 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCCTT-SCTTT--EEECCTTS--HHHHHHHHHHHHHHTSSCSEEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCchhC-CCcEE--EEEcCCCC--HHHHHHHHHHHHHHcCCCCEEE
Confidence            6889999988 9999999999999999 999999865421 00111  11122222  122222222222  13799999


Q ss_pred             EcCCCH---------------------------HHHHHHHHHhcc-CCceEEEEccC
Q 018022          278 ECVGLA---------------------------SLVQEAYACCRK-GWGKTIVLGVD  306 (362)
Q Consensus       278 d~~g~~---------------------------~~~~~~~~~l~~-~~G~iv~~G~~  306 (362)
                      ++.|..                           ...+.++..|+. ++|+|+.++..
T Consensus        84 nnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~  140 (261)
T 4h15_A           84 HMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSI  140 (261)
T ss_dssp             ECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             ECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEeh
Confidence            987731                           123455566643 23899999764

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=95.53  E-value=0.049  Score=51.99  Aligned_cols=96  Identities=15%  Similarity=0.111  Sum_probs=63.0

Q ss_pred             EEEEECCChHHHHHHHHHHHcCC--CEEEEEcCCchHHHHHH-hcC------CcE-EEcCCCCCCccHHHHHHhhcCCCc
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGA--TRIIGVDVISEKFEIGK-RFG------VTE-FVNSKNCGDKSVSQIIIDMTDGGA  273 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~--~~vi~~~~~~~~~~~~~-~~g------~~~-vv~~~~~~~~~~~~~i~~~~~~g~  273 (362)
                      +|+|+|+|.+|..+++.+...|.  ..|++.+++.++.+.+. +++      ... .+|-.+  .+++.+.+.+.   ++
T Consensus         3 kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d--~~~l~~~l~~~---~~   77 (405)
T 4ina_A            3 KVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADS--IEELVALINEV---KP   77 (405)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTC--HHHHHHHHHHH---CC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCC--HHHHHHHHHhh---CC
Confidence            78999999999999998888773  48999999998876643 332      222 222222  12333333332   58


Q ss_pred             cEEEEcCCCHHHHHHHHHHhccCCceEEEEcc
Q 018022          274 DYCFECVGLASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       274 d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      |+||+++|.......+..++..+ -.++.+..
T Consensus        78 DvVin~ag~~~~~~v~~a~l~~g-~~vvD~a~  108 (405)
T 4ina_A           78 QIVLNIALPYQDLTIMEACLRTG-VPYLDTAN  108 (405)
T ss_dssp             SEEEECSCGGGHHHHHHHHHHHT-CCEEESSC
T ss_pred             CEEEECCCcccChHHHHHHHHhC-CCEEEecC
Confidence            99999998655455566667775 55665544

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=95.52  E-value=0.076  Score=51.62  Aligned_cols=93  Identities=10%  Similarity=0.130  Sum_probs=60.0

Q ss_pred             CCEEEEECCChHHHHHHHHHHHc-CCCEEEEEcCCchHHHHHHh-cCCcE-EEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKR-FGVTE-FVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~-~g~~~-vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      +.+|+|+|+|.+|.+++..+... +. +|++++++.++.+.+.+ .+... .++..+  .+++.+.+.     ++|+||+
T Consensus        23 ~k~VlIiGAGgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~~~~~~~~~D~~d--~~~l~~~l~-----~~DvVIn   94 (467)
T 2axq_A           23 GKNVLLLGSGFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKPSGSKAISLDVTD--DSALDKVLA-----DNDVVIS   94 (467)
T ss_dssp             CEEEEEECCSTTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGGGTCEEEECCTTC--HHHHHHHHH-----TSSEEEE
T ss_pred             CCEEEEECChHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhcCCcEEEEecCC--HHHHHHHHc-----CCCEEEE
Confidence            46899999999999998888877 66 89999999888766543 34322 223222  112222222     5999999


Q ss_pred             cCCCHHHHHHHHHHhccCCceEEEE
Q 018022          279 CVGLASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       279 ~~g~~~~~~~~~~~l~~~~G~iv~~  303 (362)
                      |++..........+++.+ -.++..
T Consensus        95 ~tp~~~~~~v~~a~l~~g-~~vvd~  118 (467)
T 2axq_A           95 LIPYTFHPNVVKSAIRTK-TDVVTS  118 (467)
T ss_dssp             CSCGGGHHHHHHHHHHHT-CEEEEC
T ss_pred             CCchhhhHHHHHHHHhcC-CEEEEe
Confidence            999764333344556664 444443

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=95.49  E-value=0.056  Score=48.88  Aligned_cols=90  Identities=10%  Similarity=-0.026  Sum_probs=59.6

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCC---cEEEcCCCCCCccHHHHHHhhcCCCccEE
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV---TEFVNSKNCGDKSVSQIIIDMTDGGADYC  276 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~---~~vv~~~~~~~~~~~~~i~~~~~~g~d~v  276 (362)
                      .+.+++|+|+|++|.+.+..+...|+.+|+++.|+.++.+.+ ++++.   ..++..++            +. ..+|+|
T Consensus       125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~------------l~-~~aDiI  191 (281)
T 3o8q_A          125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ------------LK-QSYDVI  191 (281)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG------------CC-SCEEEE
T ss_pred             cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH------------hc-CCCCEE
Confidence            578999999999999999988889987999999999886554 44442   23333222            11 369999


Q ss_pred             EEcCCCHHHHHH---HHHHhccCCceEEEEc
Q 018022          277 FECVGLASLVQE---AYACCRKGWGKTIVLG  304 (362)
Q Consensus       277 id~~g~~~~~~~---~~~~l~~~~G~iv~~G  304 (362)
                      |++++....-+.   -...++++ ..++.+.
T Consensus       192 InaTp~gm~~~~~~l~~~~l~~~-~~V~Dlv  221 (281)
T 3o8q_A          192 INSTSASLDGELPAIDPVIFSSR-SVCYDMM  221 (281)
T ss_dssp             EECSCCCC----CSCCGGGEEEE-EEEEESC
T ss_pred             EEcCcCCCCCCCCCCCHHHhCcC-CEEEEec
Confidence            999986531111   12345664 4445554

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=95.49  E-value=0.033  Score=52.38  Aligned_cols=48  Identities=23%  Similarity=0.285  Sum_probs=41.1

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHH-HHhcCCc
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGVT  248 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~-~~~~g~~  248 (362)
                      -.|.+|+|.|.|.+|..+++.+...|+ +|++.+++.++++. +++++++
T Consensus       171 L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~~~~~l~~~a~~~ga~  219 (364)
T 1leh_A          171 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD  219 (364)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE
Confidence            478999999999999999999999999 89999999888764 4556653

>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5

Probab=95.49  E-value=0.058  Score=49.56  Aligned_cols=129  Identities=12%  Similarity=0.070  Sum_probs=79.1

Q ss_pred             EEEEECCChHHH-HHHHHHHHc-CCCEEEEEcCCchHHHH-HHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          204 TVVIFGLGSIGL-AVAEGARLC-GATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       204 ~vlI~Gag~~G~-~a~~la~~~-g~~~vi~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      +|.|+|+|.+|. ..+..++.. ++ ++++.+++.++.+. ++++|....+.       +..+.+    ...+|+|+.|+
T Consensus         4 ~igiIG~G~ig~~~~~~~l~~~~~~-~l~v~d~~~~~~~~~a~~~g~~~~~~-------~~~~~l----~~~~D~V~i~t   71 (323)
T 1xea_A            4 KIAMIGLGDIAQKAYLPVLAQWPDI-ELVLCTRNPKVLGTLATRYRVSATCT-------DYRDVL----QYGVDAVMIHA   71 (323)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTE-EEEEECSCHHHHHHHHHHTTCCCCCS-------STTGGG----GGCCSEEEECS
T ss_pred             EEEEECCCHHHHHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHHcCCCcccc-------CHHHHh----hcCCCEEEEEC
Confidence            688999999997 466655543 66 55588888888765 45677643111       111112    12699999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEccCCCCCccccCH------HHHH-hcCcEEEEeeccCCCccccHHHHHHHHHcCCcc
Q 018022          281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS------FEVL-HSGKILMGSLFGGLKAKSDIPILLKRYMDKWSY  353 (362)
Q Consensus       281 g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~------~~~~-~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~  353 (362)
                      +.....+.+..+++.  |+-+++-.     ++..+.      ..+. .++..+.-.+...+  ...+..+.+++++|+|-
T Consensus        72 p~~~h~~~~~~al~~--Gk~V~~EK-----P~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~--~p~~~~~~~~i~~g~iG  142 (323)
T 1xea_A           72 ATDVHSTLAAFFLHL--GIPTFVDK-----PLAASAQECENLYELAEKHHQPLYVGFNRRH--IPLYNQHLSELAQQECG  142 (323)
T ss_dssp             CGGGHHHHHHHHHHT--TCCEEEES-----CSCSSHHHHHHHHHHHHHTTCCEEEECGGGC--CHHHHHHCHHHHHTSCT
T ss_pred             CchhHHHHHHHHHHC--CCeEEEeC-----CCcCCHHHHHHHHHHHHhcCCeEEEeecccc--CHHHHHHHHHHhcCCcC
Confidence            988767788888887  56555543     122222      2222 24555543333322  35577888888888764

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=95.49  E-value=0.023  Score=49.02  Aligned_cols=100  Identities=15%  Similarity=0.150  Sum_probs=68.1

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHc--CCCEEEEEcCCchHHHHHHh----cCCc---EEEcCCCCCCccHHHHHHh
Q 018022          197 ANVEVGSTVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIID  267 (362)
Q Consensus       197 ~~~~~g~~vlI~Gag~~G~~a~~la~~~--g~~~vi~~~~~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~~~i~~  267 (362)
                      ....++.+||-+|+|. |..+..+++..  +. +|++++.+++.++.+++    .|..   .++.      .+..+.+..
T Consensus        54 ~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~------~d~~~~~~~  125 (223)
T 3duw_A           54 VQIQGARNILEIGTLG-GYSTIWLARGLSSGG-RVVTLEASEKHADIARSNIERANLNDRVEVRT------GLALDSLQQ  125 (223)
T ss_dssp             HHHHTCSEEEEECCTT-SHHHHHHHTTCCSSC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE------SCHHHHHHH
T ss_pred             HHhhCCCEEEEecCCc-cHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE------cCHHHHHHH
Confidence            3456788999999874 77788888876  45 99999999988877654    3542   2332      233333333


Q ss_pred             hc---CCCccEEEEcCCC---HHHHHHHHHHhccCCceEEEEcc
Q 018022          268 MT---DGGADYCFECVGL---ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       268 ~~---~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      +.   .+.||+|+-....   ...++.+.+.|+++ |.+++-..
T Consensus       126 ~~~~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~~  168 (223)
T 3duw_A          126 IENEKYEPFDFIFIDADKQNNPAYFEWALKLSRPG-TVIIGDNV  168 (223)
T ss_dssp             HHHTTCCCCSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEESC
T ss_pred             HHhcCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCC-cEEEEeCC
Confidence            32   1369999965432   24577889999998 98887643

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=95.44  E-value=0.054  Score=50.49  Aligned_cols=87  Identities=21%  Similarity=0.277  Sum_probs=56.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++....+...  |...+        .++.+.+.     ..|+|+-++
T Consensus       172 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~--g~~~~--------~~l~ell~-----~sDvV~l~~  235 (345)
T 4g2n_A          172 TGRRLGIFGMGRIGRAIATRARGFGL-AIHYHNRTRLSHALEE--GAIYH--------DTLDSLLG-----ASDIFLIAA  235 (345)
T ss_dssp             TTCEEEEESCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHT--TCEEC--------SSHHHHHH-----TCSEEEECS
T ss_pred             CCCEEEEEEeChhHHHHHHHHHHCCC-EEEEECCCCcchhhhc--CCeEe--------CCHHHHHh-----hCCEEEEec
Confidence            36799999999999999999999999 9999998765444332  33221        12333332     267777766


Q ss_pred             CCH----HHH-HHHHHHhccCCceEEEEc
Q 018022          281 GLA----SLV-QEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       281 g~~----~~~-~~~~~~l~~~~G~iv~~G  304 (362)
                      +..    ..+ ...+..|+++ ..++.++
T Consensus       236 Plt~~T~~li~~~~l~~mk~g-ailIN~a  263 (345)
T 4g2n_A          236 PGRPELKGFLDHDRIAKIPEG-AVVINIS  263 (345)
T ss_dssp             CCCGGGTTCBCHHHHHHSCTT-EEEEECS
T ss_pred             CCCHHHHHHhCHHHHhhCCCC-cEEEECC
Confidence            632    112 3456666665 6666665

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=95.43  E-value=0.047  Score=47.86  Aligned_cols=100  Identities=17%  Similarity=0.234  Sum_probs=67.2

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHh----cCCc---EEEcCCCCCCccHHHHHHhh
Q 018022          197 ANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       197 ~~~~~g~~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~~~i~~~  268 (362)
                      ....++.+||-+|+|. |..+..+++.+. ..++++++.+++..+.+++    .|..   .++.      .+..+.+..+
T Consensus        66 ~~~~~~~~VLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~------gda~~~l~~l  138 (237)
T 3c3y_A           66 LKLVNAKKTIEVGVFT-GYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIE------SDAMLALDNL  138 (237)
T ss_dssp             HHHTTCCEEEEECCTT-SHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE------SCHHHHHHHH
T ss_pred             HHhhCCCEEEEeCCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE------cCHHHHHHHH
Confidence            3445778999998864 777778888763 2399999999998887764    4543   2332      2333433333


Q ss_pred             c-----CCCccEEEEcCCCH---HHHHHHHHHhccCCceEEEEc
Q 018022          269 T-----DGGADYCFECVGLA---SLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       269 ~-----~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      .     .+.||.||-.....   ..++.+.+.|+++ |.++.-.
T Consensus       139 ~~~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pG-G~lv~d~  181 (237)
T 3c3y_A          139 LQGQESEGSYDFGFVDADKPNYIKYHERLMKLVKVG-GIVAYDN  181 (237)
T ss_dssp             HHSTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             HhccCCCCCcCEEEECCchHHHHHHHHHHHHhcCCC-eEEEEec
Confidence            1     34799999654432   4577889999997 9887653

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=95.43  E-value=0.091  Score=47.23  Aligned_cols=91  Identities=11%  Similarity=0.112  Sum_probs=61.6

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHH-HHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEE
Q 018022          198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYC  276 (362)
Q Consensus       198 ~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~v  276 (362)
                      ++..+.+++|+|+|++|.+++..+...|+++|+++.|+.+|.+. +++++.+ .. . .   ..       .  ..+|+|
T Consensus       115 ~~~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~-~~-~-~---~~-------~--~~~Div  179 (271)
T 1npy_A          115 HLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA-YI-N-S---LE-------N--QQADIL  179 (271)
T ss_dssp             TCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE-EE-S-C---CT-------T--CCCSEE
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-cc-h-h---hh-------c--ccCCEE
Confidence            44467789999999999999999999998889999999888654 4556642 11 1 1   00       0  258999


Q ss_pred             EEcCCCHHHH-------HHHHHHhccCCceEEEEc
Q 018022          277 FECVGLASLV-------QEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       277 id~~g~~~~~-------~~~~~~l~~~~G~iv~~G  304 (362)
                      |++++....-       ......+.++ ..++.+-
T Consensus       180 InaTp~gm~~~~~~~~~~~~~~~l~~~-~~v~Dlv  213 (271)
T 1npy_A          180 VNVTSIGMKGGKEEMDLAFPKAFIDNA-SVAFDVV  213 (271)
T ss_dssp             EECSSTTCTTSTTTTSCSSCHHHHHHC-SEEEECC
T ss_pred             EECCCCCccCccccCCCCCCHHHcCCC-CEEEEee
Confidence            9999865311       0112456665 5566664

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.43  E-value=0.1  Score=44.38  Aligned_cols=99  Identities=16%  Similarity=0.178  Sum_probs=63.7

Q ss_pred             HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc-CC-----------------cEEEcCCC
Q 018022          194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GV-----------------TEFVNSKN  255 (362)
Q Consensus       194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-g~-----------------~~vv~~~~  255 (362)
                      .....+.++.+||..|+|. |..+..+++. |+ +|+++|.+++-++.+++. +.                 -.++..+-
T Consensus        15 ~~~l~~~~~~~vLD~GCG~-G~~~~~la~~-g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~   91 (203)
T 1pjz_A           15 WSSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF   91 (203)
T ss_dssp             HHHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred             HHhcccCCCCEEEEeCCCC-cHhHHHHHHC-CC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcc
Confidence            3455678899999999865 6667777775 88 999999999988887652 21                 12222221


Q ss_pred             CCCccHHHHHHhhcCCCccEEEEcCCC-----H---HHHHHHHHHhccCCceEEEE
Q 018022          256 CGDKSVSQIIIDMTDGGADYCFECVGL-----A---SLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       256 ~~~~~~~~~i~~~~~~g~d~vid~~g~-----~---~~~~~~~~~l~~~~G~iv~~  303 (362)
                         .++...  +  .+.||+|++...-     .   ..++.+.+.|+++ |+++++
T Consensus        92 ---~~l~~~--~--~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkpg-G~~~l~  139 (203)
T 1pjz_A           92 ---FALTAR--D--IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLI  139 (203)
T ss_dssp             ---SSSTHH--H--HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEE
T ss_pred             ---ccCCcc--c--CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence               111100  0  0259999974321     1   2467889999998 994444

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=95.43  E-value=0.094  Score=42.61  Aligned_cols=99  Identities=19%  Similarity=0.203  Sum_probs=63.5

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcC-CCccEE
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTD-GGADYC  276 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~-~g~d~v  276 (362)
                      ++++++||-+|+|. |..+..+++..|. .++++++.++ ..+.    .-..++..+- ......+.+.+... +.+|+|
T Consensus        20 ~~~~~~vLd~G~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----~~~~~~~~d~-~~~~~~~~~~~~~~~~~~D~i   92 (180)
T 1ej0_A           20 FKPGMTVVDLGAAP-GGWSQYVVTQIGGKGRIIACDLLP-MDPI----VGVDFLQGDF-RDELVMKALLERVGDSKVQVV   92 (180)
T ss_dssp             CCTTCEEEEESCTT-CHHHHHHHHHHCTTCEEEEEESSC-CCCC----TTEEEEESCT-TSHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCCCeEEEeCCCC-CHHHHHHHHHhCCCCeEEEEECcc-cccc----CcEEEEEccc-ccchhhhhhhccCCCCceeEE
Confidence            68899999999977 7788888887542 3999999877 3322    2122333222 01222223333233 479999


Q ss_pred             EE-----cCCC------------HHHHHHHHHHhccCCceEEEEcc
Q 018022          277 FE-----CVGL------------ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       277 id-----~~g~------------~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      +.     ..+.            ...+..+.+.|+++ |.+++...
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  137 (180)
T 1ej0_A           93 MSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPG-GSFVVKVF  137 (180)
T ss_dssp             EECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             EECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            98     3333            35577889999998 99987654

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=95.42  E-value=0.082  Score=47.76  Aligned_cols=74  Identities=16%  Similarity=0.243  Sum_probs=51.6

Q ss_pred             CCCEEEEEC-CChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hc----CCc-EEEcCCCCCCccHHHHHHhhcCCCc
Q 018022          201 VGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF----GVT-EFVNSKNCGDKSVSQIIIDMTDGGA  273 (362)
Q Consensus       201 ~g~~vlI~G-ag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~----g~~-~vv~~~~~~~~~~~~~i~~~~~~g~  273 (362)
                      .+.++||+| +|++|.+++..+...|+ +|++++++.++.+.+. ++    +.. ...|..+      .+.+.+... .+
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~-~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~------~~~~~~~~~-~~  189 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD------DASRAEAVK-GA  189 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS------HHHHHHHTT-TC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCC------HHHHHHHHH-hC
Confidence            678999999 59999999999999999 7999999887766442 22    322 2234332      123333332 48


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |++|+++|.
T Consensus       190 DvlVn~ag~  198 (287)
T 1lu9_A          190 HFVFTAGAI  198 (287)
T ss_dssp             SEEEECCCT
T ss_pred             CEEEECCCc
Confidence            999999974

>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}

Probab=95.40  E-value=0.035  Score=47.11  Aligned_cols=96  Identities=15%  Similarity=0.145  Sum_probs=65.3

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC----cEEEcCCCCCCccHHHHHHhhcCCCcc
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV----TEFVNSKNCGDKSVSQIIIDMTDGGAD  274 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~----~~vv~~~~~~~~~~~~~i~~~~~~g~d  274 (362)
                      ++++.+||-+|+|. |..+..+++. |..++++++.++..++.+++...    -.++..+-   .++     .+..+.+|
T Consensus        40 ~~~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~---~~~-----~~~~~~fD  109 (215)
T 2pxx_A           40 LRPEDRILVLGCGN-SALSYELFLG-GFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDV---RKL-----DFPSASFD  109 (215)
T ss_dssp             CCTTCCEEEETCTT-CSHHHHHHHT-TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCT---TSC-----CSCSSCEE
T ss_pred             cCCCCeEEEECCCC-cHHHHHHHHc-CCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcch---hcC-----CCCCCccc
Confidence            47889999999876 7777777766 44489999999999888876421    22332222   111     12233799


Q ss_pred             EEEEcCC---------------------CHHHHHHHHHHhccCCceEEEEcc
Q 018022          275 YCFECVG---------------------LASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       275 ~vid~~g---------------------~~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      +|+....                     ....+..+.+.|+++ |++++...
T Consensus       110 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~  160 (215)
T 2pxx_A          110 VVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPG-GRFISMTS  160 (215)
T ss_dssp             EEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEE-EEEEEEES
T ss_pred             EEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCC-CEEEEEeC
Confidence            9996321                     134577889999998 99998764

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=95.40  E-value=0.074  Score=49.32  Aligned_cols=87  Identities=17%  Similarity=0.110  Sum_probs=56.5

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++.++.  +++. +..    .    .++.+.+.     ..|+|+.++
T Consensus       145 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~--~~~~-~~~----~----~~l~ell~-----~aDvV~l~~  207 (333)
T 1j4a_A          145 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPE--LEKK-GYY----V----DSLDDLYK-----QADVISLHV  207 (333)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHH--HHHT-TCB----C----SCHHHHHH-----HCSEEEECS
T ss_pred             CCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcchh--HHhh-Cee----c----CCHHHHHh-----hCCEEEEcC
Confidence            46789999999999999999999999 999999887654  2332 211    1    12333332     267777776


Q ss_pred             CCHHH----H-HHHHHHhccCCceEEEEcc
Q 018022          281 GLASL----V-QEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       281 g~~~~----~-~~~~~~l~~~~G~iv~~G~  305 (362)
                      +....    + ...+..|+++ +.++.++.
T Consensus       208 p~~~~t~~li~~~~l~~mk~g-a~lIn~ar  236 (333)
T 1j4a_A          208 PDVPANVHMINDESIAKMKQD-VVIVNVSR  236 (333)
T ss_dssp             CCCGGGTTCBSHHHHHHSCTT-EEEEECSC
T ss_pred             CCcHHHHHHHhHHHHhhCCCC-cEEEECCC
Confidence            64321    1 2455666665 66666653

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=95.39  E-value=0.042  Score=50.42  Aligned_cols=73  Identities=19%  Similarity=0.167  Sum_probs=46.4

Q ss_pred             EEEEECC-ChHHHHHHHHHHHc-CCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHH-HHHHhhcCCCccEEEEcC
Q 018022          204 TVVIFGL-GSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVS-QIIIDMTDGGADYCFECV  280 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~-~~i~~~~~~g~d~vid~~  280 (362)
                      +|||+|+ |.+|...++.+... |+ +|++++++.++.+.+.+..--+++..+-.+..+.. +.+.     ++|+||.++
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~d~vih~A   75 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHY-EVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK-----KCDVVLPLV   75 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTC-EEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH-----HCSEEEECB
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCC-EEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhcc-----CCCEEEEcc
Confidence            6899998 99999999988887 78 99999988776543322111123322210012222 2222     589999987


Q ss_pred             CC
Q 018022          281 GL  282 (362)
Q Consensus       281 g~  282 (362)
                      +.
T Consensus        76 ~~   77 (345)
T 2bll_A           76 AI   77 (345)
T ss_dssp             CC
T ss_pred             cc
Confidence            73

>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}

Probab=95.38  E-value=0.06  Score=50.02  Aligned_cols=131  Identities=10%  Similarity=-0.006  Sum_probs=80.4

Q ss_pred             EEEEECCChHHH-HHHH-HHH-HcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          204 TVVIFGLGSIGL-AVAE-GAR-LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       204 ~vlI~Gag~~G~-~a~~-la~-~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      +|.|+|+|.+|. .++. +.+ .-+++-+.+.+++.++.+.+.+++...++.       ++.+.+.   ...+|+|+.|+
T Consensus         4 rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~-------~~~~ll~---~~~~D~V~i~t   73 (345)
T 3f4l_A            4 NCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTS-------DLDEVLN---DPDVKLVVVCT   73 (345)
T ss_dssp             EEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEES-------CTHHHHT---CTTEEEEEECS
T ss_pred             EEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCceEC-------CHHHHhc---CCCCCEEEEcC
Confidence            688999999997 4666 423 446734446777777665555554333332       2222222   12699999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH------H-HHhcCcEEEEeeccCCCccccHHHHHHHHHcCCcc
Q 018022          281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF------E-VLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSY  353 (362)
Q Consensus       281 g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~------~-~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~  353 (362)
                      +.....+.+..+++.  |+-+++-.     ++..+..      . .-.++..+.-.+...+  ...+..+.+++++|+|-
T Consensus        74 p~~~h~~~~~~al~a--Gk~Vl~EK-----P~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~--~p~~~~~~~~i~~g~iG  144 (345)
T 3f4l_A           74 HADSHFEYAKRALEA--GKNVLVEK-----PFTPTLAQAKELFALAKSKGLTVTPYQNRRF--DSCFLTAKKAIESGKLG  144 (345)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEECS-----SSCSSHHHHHHHHHHHHHHTCCEEECCGGGG--CHHHHHHHHHHHHSTTC
T ss_pred             ChHHHHHHHHHHHHc--CCcEEEeC-----CCCCCHHHHHHHHHHHHHcCCeEEEEechhc--CHHHHHHHHHHhcCCCC
Confidence            988778888888888  57777743     2333332      1 2234555543332222  35678888888888763

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=95.37  E-value=0.061  Score=51.41  Aligned_cols=86  Identities=21%  Similarity=0.232  Sum_probs=54.7

Q ss_pred             hcCC-CCCCEEEEECC-ChHHHHHHHHHHH-cCCCEEEEEcCCchHH----------------HHHHhcCCcE-EEcCCC
Q 018022          196 TANV-EVGSTVVIFGL-GSIGLAVAEGARL-CGATRIIGVDVISEKF----------------EIGKRFGVTE-FVNSKN  255 (362)
Q Consensus       196 ~~~~-~~g~~vlI~Ga-g~~G~~a~~la~~-~g~~~vi~~~~~~~~~----------------~~~~~~g~~~-vv~~~~  255 (362)
                      ...+ +.+.++||+|+ +++|++.+..+.. .|+ +|++++++.+..                +.+++.|... .+.-+-
T Consensus        54 ~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA-~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dv  132 (422)
T 3s8m_A           54 RGVRNDGPKKVLVIGASSGYGLASRITAAFGFGA-DTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDA  132 (422)
T ss_dssp             TCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred             ccccccCCCEEEEECCChHHHHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecC
Confidence            3445 45778999998 9999998888887 999 898888765431                3455666543 232221


Q ss_pred             CCCcc---HHHHHHhhcCCCccEEEEcCCC
Q 018022          256 CGDKS---VSQIIIDMTDGGADYCFECVGL  282 (362)
Q Consensus       256 ~~~~~---~~~~i~~~~~~g~d~vid~~g~  282 (362)
                      ..++.   +.+.+.+..+|++|+++++.|.
T Consensus       133 td~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          133 FSDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             TSHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            01122   2333344342579999999875

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=95.36  E-value=0.013  Score=52.17  Aligned_cols=77  Identities=17%  Similarity=0.186  Sum_probs=49.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcC--CCccEEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTD--GGADYCF  277 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~--~g~d~vi  277 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+..   .+ ..+.-+-.+.+++.+.+.+...  +++|++|
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~---~~-~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv  101 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSADP---DI-HTVAGDISKPETADRIVREGIERFGRIDSLV  101 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCSST---TE-EEEESCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccC---ce-EEEEccCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence            4678999998 9999999999999999 999999876543211   11 2222111011233333333221  2799999


Q ss_pred             EcCCC
Q 018022          278 ECVGL  282 (362)
Q Consensus       278 d~~g~  282 (362)
                      .+.|.
T Consensus       102 ~nAg~  106 (260)
T 3un1_A          102 NNAGV  106 (260)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99884

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=95.36  E-value=0.096  Score=47.15  Aligned_cols=97  Identities=13%  Similarity=0.116  Sum_probs=67.6

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCC---cEEEcCCCCCCccHHHHHHhhcC
Q 018022          198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV---TEFVNSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       198 ~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~---~~vv~~~~~~~~~~~~~i~~~~~  270 (362)
                      .+.++.+||-+|+|. |..+..+++..|. ++++++.++..++.+++    .|.   -.++..+-   .++     .+.+
T Consensus        79 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~-----~~~~  148 (297)
T 2o57_A           79 VLQRQAKGLDLGAGY-GGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF---LEI-----PCED  148 (297)
T ss_dssp             CCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT---TSC-----SSCT
T ss_pred             CCCCCCEEEEeCCCC-CHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCc---ccC-----CCCC
Confidence            788999999999874 7777788887788 99999999988777654    232   12332221   111     1122


Q ss_pred             CCccEEEEcCCC------HHHHHHHHHHhccCCceEEEEcc
Q 018022          271 GGADYCFECVGL------ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       271 ~g~d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      +.||+|+....-      ...+..+.+.|+++ |++++...
T Consensus       149 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  188 (297)
T 2o57_A          149 NSYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP  188 (297)
T ss_dssp             TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCEeEEEecchhhhcCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence            379999975332      35578999999998 99887753

>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}

Probab=95.35  E-value=0.21  Score=45.79  Aligned_cols=106  Identities=20%  Similarity=0.162  Sum_probs=69.8

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHH-cCCCEEEEEcCCchHHHHHHh----cCCcEEEcCCCCCCccHHHHHHhhcCCCc
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTDGGA  273 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~-~g~~~vi~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~~i~~~~~~g~  273 (362)
                      .+...+++|+|+|.+|...+..++. .+.++|.+.+++ +..+++++    +|......  +     +.+.++     +.
T Consensus       118 ~~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~g~~~~~~--~-----~~eav~-----~a  184 (313)
T 3hdj_A          118 RPRSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRCGVPARMA--A-----PADIAA-----QA  184 (313)
T ss_dssp             CTTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHHTSCEEEC--C-----HHHHHH-----HC
T ss_pred             cCCCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhcCCeEEEe--C-----HHHHHh-----hC
Confidence            3567889999999999988877664 577799999998 44444443    46543221  2     344444     38


Q ss_pred             cEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHH
Q 018022          274 DYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVL  320 (362)
Q Consensus       274 d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~  320 (362)
                      |+|+.|++....+-. ...++++ -.++.+|.+.+.. .+++...+.
T Consensus       185 DIVi~aT~s~~pvl~-~~~l~~G-~~V~~vGs~~p~~-~El~~~~~~  228 (313)
T 3hdj_A          185 DIVVTATRSTTPLFA-GQALRAG-AFVGAIGSSLPHT-RELDDEALR  228 (313)
T ss_dssp             SEEEECCCCSSCSSC-GGGCCTT-CEEEECCCSSTTC-CCCCHHHHH
T ss_pred             CEEEEccCCCCcccC-HHHcCCC-cEEEECCCCCCch-hhcCHHHHh
Confidence            999999987531111 3468886 7888888864433 566655443

>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}

Probab=95.35  E-value=0.22  Score=46.41  Aligned_cols=132  Identities=14%  Similarity=0.118  Sum_probs=84.6

Q ss_pred             CEEEEECCChHHHHHHHHHH-H-cCCCEEEEEcCCchHHHH-HHhcCC-cEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          203 STVVIFGLGSIGLAVAEGAR-L-CGATRIIGVDVISEKFEI-GKRFGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~-~-~g~~~vi~~~~~~~~~~~-~~~~g~-~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      -+|.|+|+|.+|...+..++ . -+++.+.+.+++.++.+. ++++|. ..++       .++.+.+.+   ..+|+|+.
T Consensus        24 ~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~-------~~~~~ll~~---~~~D~V~i   93 (357)
T 3ec7_A           24 LKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDY-------NDYHDLIND---KDVEVVII   93 (357)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEE-------SSHHHHHHC---TTCCEEEE
T ss_pred             eeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeee-------CCHHHHhcC---CCCCEEEE
Confidence            36899999999988777776 4 367344467888887665 556773 3333       234444432   26999999


Q ss_pred             cCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH------HH-HhcCcEE--EEeeccCCCccccHHHHHHHHHc
Q 018022          279 CVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF------EV-LHSGKIL--MGSLFGGLKAKSDIPILLKRYMD  349 (362)
Q Consensus       279 ~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~------~~-~~~~~~i--~g~~~~~~~~~~~l~~~l~~~~~  349 (362)
                      |++.....+.+..+++.  |+-+++-.+     +..+..      .+ -.++..+  .++.. .  ....+..+.+++++
T Consensus        94 ~tp~~~h~~~~~~al~a--Gk~Vl~EKP-----la~~~~e~~~l~~~a~~~g~~~~~v~~~~-R--~~p~~~~~k~~i~~  163 (357)
T 3ec7_A           94 TASNEAHADVAVAALNA--NKYVFCEKP-----LAVTAADCQRVIEAEQKNGKRMVQIGFMR-R--YDKGYVQLKNIIDS  163 (357)
T ss_dssp             CSCGGGHHHHHHHHHHT--TCEEEEESS-----SCSSHHHHHHHHHHHHHHTSCCEEEECGG-G--GSHHHHHHHHHHHH
T ss_pred             cCCcHHHHHHHHHHHHC--CCCEEeecC-----ccCCHHHHHHHHHHHHHhCCeEEEEeecc-c--CCHHHHHHHHHHhc
Confidence            99988778888888888  577777542     223322      22 2245543  44432 2  23667888888888


Q ss_pred             CCccc
Q 018022          350 KWSYV  354 (362)
Q Consensus       350 g~l~~  354 (362)
                      |+|--
T Consensus       164 g~iG~  168 (357)
T 3ec7_A          164 GEIGQ  168 (357)
T ss_dssp             TTTCS
T ss_pred             CCCCC
Confidence            87643

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=95.34  E-value=0.058  Score=50.04  Aligned_cols=44  Identities=25%  Similarity=0.351  Sum_probs=37.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG  246 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g  246 (362)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++.++ +.+.+.|
T Consensus       145 ~g~~vgIIG~G~iG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g  188 (333)
T 2d0i_A          145 YGKKVGILGMGAIGKAIARRLIPFGV-KLYYWSRHRKV-NVEKELK  188 (333)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCH-HHHHHHT
T ss_pred             CcCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcC
Confidence            46789999999999999999999999 99999998876 4444444

>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A

Probab=95.34  E-value=0.17  Score=47.12  Aligned_cols=128  Identities=16%  Similarity=0.148  Sum_probs=79.0

Q ss_pred             CEEEEECCChHHHH-HHHHHHHc-CCCEEE-EEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          203 STVVIFGLGSIGLA-VAEGARLC-GATRII-GVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       203 ~~vlI~Gag~~G~~-a~~la~~~-g~~~vi-~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      -+|.|+|+|.+|.. .+..++.. ++ +++ +.+++.++  ..++++...++.       ++.+.+.   ...+|+|+.|
T Consensus         6 ~rvgiiG~G~~g~~~~~~~l~~~~~~-~l~av~d~~~~~--~~~~~~~~~~~~-------~~~~ll~---~~~vD~V~i~   72 (358)
T 3gdo_A            6 IKVGILGYGLSGSVFHGPLLDVLDEY-QISKIMTSRTEE--VKRDFPDAEVVH-------ELEEITN---DPAIELVIVT   72 (358)
T ss_dssp             EEEEEECCSHHHHHTTHHHHTTCTTE-EEEEEECSCHHH--HHHHCTTSEEES-------STHHHHT---CTTCCEEEEC
T ss_pred             ceEEEEccCHHHHHHHHHHHhhCCCe-EEEEEEcCCHHH--HHhhCCCCceEC-------CHHHHhc---CCCCCEEEEc
Confidence            36899999999985 66665544 67 554 55655554  455564444432       2323322   1269999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH------HH-HhcCcEEEEeeccCCCccccHHHHHHHHHcCCc
Q 018022          280 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF------EV-LHSGKILMGSLFGGLKAKSDIPILLKRYMDKWS  352 (362)
Q Consensus       280 ~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~------~~-~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l  352 (362)
                      ++.....+.+..+++.  |+-|++-.     ++..+..      .+ -.++..+.-.+...+  ...+..+.+++++|+|
T Consensus        73 tp~~~H~~~~~~al~a--GkhVl~EK-----Pla~~~~e~~~l~~~a~~~g~~~~v~~~~r~--~p~~~~~k~~i~~g~i  143 (358)
T 3gdo_A           73 TPSGLHYEHTMACIQA--GKHVVMEK-----PMTATAEEGETLKRAADEKGVLLSVYHNRRW--DNDFLTIKKLISEGSL  143 (358)
T ss_dssp             SCTTTHHHHHHHHHHT--TCEEEEES-----SCCSSHHHHHHHHHHHHHHTCCEEEECGGGG--SHHHHHHHHHHHTTSS
T ss_pred             CCcHHHHHHHHHHHHc--CCeEEEec-----CCcCCHHHHHHHHHHHHHcCCeEEEeeeccc--CHHHHHHHHHHhcCCC
Confidence            9988778888999988  57777743     2233322      22 223554443332222  3567888889998876

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.30  E-value=0.18  Score=43.95  Aligned_cols=94  Identities=16%  Similarity=0.127  Sum_probs=59.6

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch-HHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~-~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      .+.+|||+|+|.+|...++.+...|+ .|++++.... .++.+.+.+--..+...- .+.+       +  .++|+||-+
T Consensus        30 ~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~~~l~~l~~~~~i~~i~~~~-~~~d-------L--~~adLVIaA   98 (223)
T 3dfz_A           30 KGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVSAEINEWEAKGQLRVKRKKV-GEED-------L--LNVFFIVVA   98 (223)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCCHHHHHHHHTTSCEEECSCC-CGGG-------S--SSCSEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCCHHHHHHHHcCCcEEEECCC-CHhH-------h--CCCCEEEEC
Confidence            46889999999999999999999999 7888775442 333333333223332111 0111       1  169999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEccCC
Q 018022          280 VGLASLVQEAYACCRKGWGKTIVLGVDQ  307 (362)
Q Consensus       280 ~g~~~~~~~~~~~l~~~~G~iv~~G~~~  307 (362)
                      ++.+. ++..+...+.. |..|.....+
T Consensus        99 T~d~~-~N~~I~~~ak~-gi~VNvvD~p  124 (223)
T 3dfz_A           99 TNDQA-VNKFVKQHIKN-DQLVNMASSF  124 (223)
T ss_dssp             CCCTH-HHHHHHHHSCT-TCEEEC----
T ss_pred             CCCHH-HHHHHHHHHhC-CCEEEEeCCc
Confidence            99988 55444444556 8888776543

>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}

Probab=95.28  E-value=0.079  Score=47.94  Aligned_cols=45  Identities=22%  Similarity=0.271  Sum_probs=36.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF  245 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~  245 (362)
                      .++.+||=+|+|. |..+..+++..+..+|+++|.++.-++.+++.
T Consensus        45 ~~~~~VLDiGCG~-G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~   89 (292)
T 3g07_A           45 FRGRDVLDLGCNV-GHLTLSIACKWGPSRMVGLDIDSRLIHSARQN   89 (292)
T ss_dssp             TTTSEEEEESCTT-CHHHHHHHHHTCCSEEEEEESCHHHHHHHHHT
T ss_pred             cCCCcEEEeCCCC-CHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH
Confidence            4678999999875 78888888887655999999999888887753

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=95.28  E-value=0.23  Score=46.09  Aligned_cols=37  Identities=27%  Similarity=0.354  Sum_probs=33.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchH
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK  238 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~  238 (362)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++.++
T Consensus       170 ~gktiGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~  206 (340)
T 4dgs_A          170 KGKRIGVLGLGQIGRALASRAEAFGM-SVRYWNRSTLS  206 (340)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCT
T ss_pred             cCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCccc
Confidence            47899999999999999999999999 99999987654

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=95.27  E-value=0.074  Score=48.56  Aligned_cols=99  Identities=16%  Similarity=0.053  Sum_probs=66.9

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC---------C-cEEEcCCCCCCccHHHHHHhh
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG---------V-TEFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g---------~-~~vv~~~~~~~~~~~~~i~~~  268 (362)
                      .+++.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-         . -.++.      .+..+.+.+.
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~------~D~~~~~~~~  165 (304)
T 3bwc_A           93 HPKPERVLIIGGGD-GGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRV------GDGLAFVRQT  165 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHHHSS
T ss_pred             CCCCCeEEEEcCCC-CHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE------CcHHHHHHhc
Confidence            46778999998865 666667777655559999999998888877521         1 12332      2344444332


Q ss_pred             cCCCccEEEEcCCC----------HHHHHHHHHHhccCCceEEEEcc
Q 018022          269 TDGGADYCFECVGL----------ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       269 ~~~g~d~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ..+.||+|+-....          ...++.+.+.|+++ |.+++...
T Consensus       166 ~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~~  211 (304)
T 3bwc_A          166 PDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPD-GICCNQGE  211 (304)
T ss_dssp             CTTCEEEEEEECC---------CCHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             cCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence            33479999964421          35578899999998 99988754

>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}

Probab=95.27  E-value=0.11  Score=48.50  Aligned_cols=130  Identities=13%  Similarity=0.004  Sum_probs=80.6

Q ss_pred             CEEEEECCChHHHH-HHHHHHHc-CCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          203 STVVIFGLGSIGLA-VAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       203 ~~vlI~Gag~~G~~-a~~la~~~-g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      -+|.|+|+|.+|.. .+...+.. +++-+.+.+++.++  .+++++...++.       ++.+.+.   ...+|+|+.|+
T Consensus         6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~--~~~~~~~~~~~~-------~~~~ll~---~~~vD~V~i~t   73 (362)
T 3fhl_A            6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKEL--SKERYPQASIVR-------SFKELTE---DPEIDLIVVNT   73 (362)
T ss_dssp             EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCG--GGTTCTTSEEES-------CSHHHHT---CTTCCEEEECS
T ss_pred             eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH--HHHhCCCCceEC-------CHHHHhc---CCCCCEEEEeC
Confidence            36889999999985 66665554 77344455666665  344564334432       2222222   12699999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH------HH-HhcCcEEEEeeccCCCccccHHHHHHHHHcCCcc
Q 018022          281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF------EV-LHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSY  353 (362)
Q Consensus       281 g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~------~~-~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~  353 (362)
                      ......+.+..+++.  |+-|++-..     +..+..      .+ -.++..+.-.+...+  ...+..+.+++++|+|-
T Consensus        74 p~~~H~~~~~~al~a--GkhVl~EKP-----~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~--~p~~~~~k~~i~~G~iG  144 (362)
T 3fhl_A           74 PDNTHYEYAGMALEA--GKNVVVEKP-----FTSTTKQGEELIALAKKKGLMLSVYQNRRW--DADFLTVRDILAKSLLG  144 (362)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEEESS-----CCSSHHHHHHHHHHHHHHTCCEEEECGGGG--SHHHHHHHHHHHTTTTS
T ss_pred             ChHHHHHHHHHHHHC--CCeEEEecC-----CCCCHHHHHHHHHHHHHcCCEEEEEeccee--CHHHHHHHHHHHcCCCC
Confidence            998778889999988  577777542     223322      12 224555543333222  36688889999998764

>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}

Probab=95.23  E-value=0.15  Score=48.22  Aligned_cols=134  Identities=13%  Similarity=0.022  Sum_probs=86.9

Q ss_pred             CEEEEECCCh---HHHHHHHHHHHcC-CCEEEE--EcCCchHHHH-HHhcCCc--EEEcCCCCCCccHHHHHHhhc--CC
Q 018022          203 STVVIFGLGS---IGLAVAEGARLCG-ATRIIG--VDVISEKFEI-GKRFGVT--EFVNSKNCGDKSVSQIIIDMT--DG  271 (362)
Q Consensus       203 ~~vlI~Gag~---~G~~a~~la~~~g-~~~vi~--~~~~~~~~~~-~~~~g~~--~vv~~~~~~~~~~~~~i~~~~--~~  271 (362)
                      -+|.|+|+|.   +|...+..++..+ + .+++  .+++.++.+. ++++|..  .++       .++.+.+.+..  +.
T Consensus        13 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~-~lva~v~d~~~~~a~~~a~~~g~~~~~~~-------~~~~~ll~~~~~~~~   84 (398)
T 3dty_A           13 IRWAMVGGGSQSQIGYIHRCAALRDNTF-VLVAGAFDIDPIRGSAFGEQLGVDSERCY-------ADYLSMFEQEARRAD   84 (398)
T ss_dssp             EEEEEEECCTTCSSHHHHHHHHHGGGSE-EEEEEECCSSHHHHHHHHHHTTCCGGGBC-------SSHHHHHHHHTTCTT
T ss_pred             ceEEEEcCCccchhHHHHHHHHhhCCCe-EEEEEEeCCCHHHHHHHHHHhCCCcceee-------CCHHHHHhcccccCC
Confidence            4789999998   9988877776654 5 5554  4777777665 5568864  221       34555555421  12


Q ss_pred             CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH------HH-HhcCcEEEEeeccCCCccccHHHHH
Q 018022          272 GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF------EV-LHSGKILMGSLFGGLKAKSDIPILL  344 (362)
Q Consensus       272 g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~------~~-~~~~~~i~g~~~~~~~~~~~l~~~l  344 (362)
                      .+|+|+.|++.....+.+..+++.  |+-|++-.     ++..+..      .+ -.++..+.-.+...  ....++.+.
T Consensus        85 ~vD~V~i~tp~~~H~~~~~~al~a--GkhVl~EK-----Pla~~~~ea~~l~~~a~~~g~~~~v~~~~r--~~p~~~~~k  155 (398)
T 3dty_A           85 GIQAVSIATPNGTHYSITKAALEA--GLHVVCEK-----PLCFTVEQAENLRELSHKHNRIVGVTYGYA--GHQLIEQAR  155 (398)
T ss_dssp             CCSEEEEESCGGGHHHHHHHHHHT--TCEEEECS-----CSCSCHHHHHHHHHHHHHTTCCEEECCGGG--GSHHHHHHH
T ss_pred             CCCEEEECCCcHHHHHHHHHHHHC--CCeEEEeC-----CCcCCHHHHHHHHHHHHHcCCeEEEEeccc--CCHHHHHHH
Confidence            599999999988778889999988  57777743     3333332      22 22455443333222  236688888


Q ss_pred             HHHHcCCcc
Q 018022          345 KRYMDKWSY  353 (362)
Q Consensus       345 ~~~~~g~l~  353 (362)
                      +++++|+|-
T Consensus       156 ~~i~~G~iG  164 (398)
T 3dty_A          156 EMIAAGELG  164 (398)
T ss_dssp             HHHHTTTTC
T ss_pred             HHHhcCCCC
Confidence            999998773

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=95.21  E-value=0.037  Score=49.10  Aligned_cols=79  Identities=16%  Similarity=0.180  Sum_probs=48.9

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc-hHHHHHHh----cCCc-EEEcCCCCCCccHHHHHHhhcC--CC
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~-~~~~~~~~----~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      +.++||+|+ |++|.+.++.+...|+ +|+++++++ +..+.+++    .+.. .++.-+-.+.+++.+.+.++..  ++
T Consensus         7 ~k~vlVTGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   85 (264)
T 3i4f_A            7 VRHALITAGTKGLGKQVTEKLLAKGY-SVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK   85 (264)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             cCEEEEeCCCchhHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            578999998 9999999999999999 888875554 44444433    2222 2222221012333333333322  27


Q ss_pred             ccEEEEcCC
Q 018022          273 ADYCFECVG  281 (362)
Q Consensus       273 ~d~vid~~g  281 (362)
                      +|++|.+.|
T Consensus        86 id~lv~~Ag   94 (264)
T 3i4f_A           86 IDFLINNAG   94 (264)
T ss_dssp             CCEEECCCC
T ss_pred             CCEEEECCc
Confidence            999999999

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=95.21  E-value=0.095  Score=48.56  Aligned_cols=78  Identities=21%  Similarity=0.196  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHc-CCCEEEEEcCCchHHHHHHh-cC--CcEEEcCCCCCCccHHHHHHhhcCCCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKR-FG--VTEFVNSKNCGDKSVSQIIIDMTDGGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~-~g--~~~vv~~~~~~~~~~~~~i~~~~~~g~d~  275 (362)
                      .+.+|||+|+ |.+|...++.+... |..+|+++++++.+.+.+.+ +.  .-.++..+-   .+ .+.+.+... ++|+
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl---~d-~~~l~~~~~-~~D~   94 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDV---RD-LERLNYALE-GVDI   94 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCT---TC-HHHHHHHTT-TCSE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCC---CC-HHHHHHHHh-cCCE
Confidence            4689999998 99999999888877 86699999998887765443 32  112222221   11 234444443 6999


Q ss_pred             EEEcCCCH
Q 018022          276 CFECVGLA  283 (362)
Q Consensus       276 vid~~g~~  283 (362)
                      ||.+++..
T Consensus        95 Vih~Aa~~  102 (344)
T 2gn4_A           95 CIHAAALK  102 (344)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999853

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=95.19  E-value=0.12  Score=50.93  Aligned_cols=81  Identities=19%  Similarity=0.222  Sum_probs=52.8

Q ss_pred             CCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchH-------HHHHHhcCCcE-EEcCCCCCCccHHHHHHhhc
Q 018022          199 VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-------FEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       199 ~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~-------~~~~~~~g~~~-vv~~~~~~~~~~~~~i~~~~  269 (362)
                      ++++.++||+|+ |++|...+..+...|+++|+.++++...       .+.+++.|... ++.-+-.+.+.+.+.+.+  
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~--  333 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA--  333 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH--
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc--
Confidence            567899999988 9999999988888999778888887632       22334456432 222221011223333333  


Q ss_pred             CCCccEEEEcCCC
Q 018022          270 DGGADYCFECVGL  282 (362)
Q Consensus       270 ~~g~d~vid~~g~  282 (362)
                       +.+|+||.+.|.
T Consensus       334 -~~ld~VVh~AGv  345 (511)
T 2z5l_A          334 -YPPNAVFHTAGI  345 (511)
T ss_dssp             -SCCSEEEECCCC
T ss_pred             -CCCcEEEECCcc
Confidence             479999999884

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=95.19  E-value=0.028  Score=48.93  Aligned_cols=99  Identities=16%  Similarity=0.164  Sum_probs=59.9

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCC-EEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      +.++||+|+ |.+|.+.++.+...|+. +|++++++.++.+....-+.. ++..+-   .+ .+.+.+... ++|++|.+
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~-~~~~D~---~d-~~~~~~~~~-~~d~vi~~   91 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVN-QEVVDF---EK-LDDYASAFQ-GHDVGFCC   91 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCE-EEECCG---GG-GGGGGGGGS-SCSEEEEC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCce-EEecCc---CC-HHHHHHHhc-CCCEEEEC
Confidence            578999998 99999999988888863 788888877654322211222 222111   11 122333332 69999999


Q ss_pred             CCCHH--------------HHHHHHHHhccC-CceEEEEccC
Q 018022          280 VGLAS--------------LVQEAYACCRKG-WGKTIVLGVD  306 (362)
Q Consensus       280 ~g~~~--------------~~~~~~~~l~~~-~G~iv~~G~~  306 (362)
                      .|...              ....+++.+++. .+++++++..
T Consensus        92 ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~  133 (242)
T 2bka_A           92 LGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSK  133 (242)
T ss_dssp             CCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccC
Confidence            98632              122344445442 1589988764

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=95.18  E-value=0.074  Score=47.49  Aligned_cols=91  Identities=15%  Similarity=0.130  Sum_probs=63.7

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  282 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~  282 (362)
                      .+|||+|+|.+|...+..+...|+ +|++++++.++.+.+...++..+. .+-   .++.       -.++|+||.+++.
T Consensus         6 ~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~-~D~---~d~~-------~~~~d~vi~~a~~   73 (286)
T 3ius_A            6 GTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRASGAEPLL-WPG---EEPS-------LDGVTHLLISTAP   73 (286)
T ss_dssp             CEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHHTTEEEEE-SSS---SCCC-------CTTCCEEEECCCC
T ss_pred             CcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhhCCCeEEE-ecc---cccc-------cCCCCEEEECCCc
Confidence            579999999999999999998999 999999999988887776654433 222   2211       1279999999874


Q ss_pred             H----HHHHHHHHHhcc--C-CceEEEEcc
Q 018022          283 A----SLVQEAYACCRK--G-WGKTIVLGV  305 (362)
Q Consensus       283 ~----~~~~~~~~~l~~--~-~G~iv~~G~  305 (362)
                      .    .....+++.++.  . -.+++.++.
T Consensus        74 ~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss  103 (286)
T 3ius_A           74 DSGGDPVLAALGDQIAARAAQFRWVGYLST  103 (286)
T ss_dssp             BTTBCHHHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred             cccccHHHHHHHHHHHhhcCCceEEEEeec
Confidence            3    223445555443  1 147887764

>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A

Probab=95.17  E-value=0.079  Score=49.28  Aligned_cols=130  Identities=9%  Similarity=0.068  Sum_probs=78.2

Q ss_pred             EEEEECCChHHH-HHHHHHHHc-CCCEEEEEcCCchHHHHHHhcCC--cEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          204 TVVIFGLGSIGL-AVAEGARLC-GATRIIGVDVISEKFEIGKRFGV--TEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       204 ~vlI~Gag~~G~-~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~g~--~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      +|.|+|+|.+|. ..+...+.. ++ +++++...+...+++++++.  ..++.       ++.+.+.   ...+|+|+.|
T Consensus         4 rvgiiG~G~~g~~~~~~~l~~~~~~-~l~av~d~~~~~~~a~~~~~~~~~~~~-------~~~~ll~---~~~~D~V~i~   72 (349)
T 3i23_A            4 KMGFIGFGKSANRYHLPYVMIRETL-EVKTIFDLHVNEKAAAPFKEKGVNFTA-------DLNELLT---DPEIELITIC   72 (349)
T ss_dssp             EEEEECCSHHHHHTTHHHHTTCTTE-EEEEEECTTCCHHHHHHHHTTTCEEES-------CTHHHHS---CTTCCEEEEC
T ss_pred             EEEEEccCHHHHHHHHHHHhhCCCe-EEEEEECCCHHHHHHHhhCCCCCeEEC-------CHHHHhc---CCCCCEEEEe
Confidence            688999999998 667766544 67 55544433344455555432  12321       2222222   1269999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH------HH-HhcCcEEEEeeccCCCccccHHHHHHHHHcCCc
Q 018022          280 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF------EV-LHSGKILMGSLFGGLKAKSDIPILLKRYMDKWS  352 (362)
Q Consensus       280 ~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~------~~-~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l  352 (362)
                      ++.....+.+..+++.  |+-|++-.     ++..+..      .+ -.++..+.-.+...+  ...+..+.+++++|+|
T Consensus        73 tp~~~h~~~~~~al~a--Gk~Vl~EK-----P~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~--~p~~~~~~~~i~~g~i  143 (349)
T 3i23_A           73 TPAHTHYDLAKQAILA--GKSVIVEK-----PFCDTLEHAEELFALGQEKGVVVMPYQNRRF--DGDYLAMKQVVEQGFL  143 (349)
T ss_dssp             SCGGGHHHHHHHHHHT--TCEEEECS-----CSCSSHHHHHHHHHHHHHTTCCEEECCGGGG--CHHHHHHHHHHHHTTT
T ss_pred             CCcHHHHHHHHHHHHc--CCEEEEEC-----CCcCCHHHHHHHHHHHHHcCCeEEEEecccC--CHHHHHHHHHHhcCCC
Confidence            9988778888899987  57777743     2333332      22 234555543332222  3567888888988876


Q ss_pred             c
Q 018022          353 Y  353 (362)
Q Consensus       353 ~  353 (362)
                      -
T Consensus       144 G  144 (349)
T 3i23_A          144 G  144 (349)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=95.17  E-value=0.11  Score=46.02  Aligned_cols=102  Identities=17%  Similarity=0.233  Sum_probs=70.3

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCC---cEEEcCCCCCCccHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV---TEFVNSKNCGDKSVSQII  265 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~---~~vv~~~~~~~~~~~~~i  265 (362)
                      +.....++++.+||-+|+|. |..+..+++..+. +|++++.+++.++.+++    .|.   ..++..+-   .++    
T Consensus        53 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~----  123 (273)
T 3bus_A           53 MIALLDVRSGDRVLDVGCGI-GKPAVRLATARDV-RVTGISISRPQVNQANARATAAGLANRVTFSYADA---MDL----  123 (273)
T ss_dssp             HHHHSCCCTTCEEEEESCTT-SHHHHHHHHHSCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSC----
T ss_pred             HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcc---ccC----
Confidence            45667788999999999876 7777888887787 99999999988777654    232   22333222   111    


Q ss_pred             HhhcCCCccEEEEcC-----CC-HHHHHHHHHHhccCCceEEEEcc
Q 018022          266 IDMTDGGADYCFECV-----GL-ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       266 ~~~~~~g~d~vid~~-----g~-~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                       ...++.||+|+..-     .. ...++.+.+.|+++ |++++...
T Consensus       124 -~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~~  167 (273)
T 3bus_A          124 -PFEDASFDAVWALESLHHMPDRGRALREMARVLRPG-GTVAIADF  167 (273)
T ss_dssp             -CSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEE-EEEEEEEE
T ss_pred             -CCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence             11223799998532     22 35578899999998 99887653

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=95.17  E-value=0.049  Score=48.47  Aligned_cols=81  Identities=14%  Similarity=0.090  Sum_probs=49.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEE-EcCCchHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIG-VDVISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~-~~~~~~~~~~~----~~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .+.++||+|+ |++|.+.++.+...|+ +|++ ..++.++.+.+    ++.+.. .++..+-.+.+++.+.+.+...  +
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGF-NIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHG  103 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            3578999998 9999999999999999 6644 55666554432    223332 2332221112333333333221  3


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      .+|++|.+.|.
T Consensus       104 ~id~li~nAg~  114 (267)
T 4iiu_A          104 AWYGVVSNAGI  114 (267)
T ss_dssp             CCSEEEECCCC
T ss_pred             CccEEEECCCC
Confidence            79999999884

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=95.17  E-value=0.19  Score=46.20  Aligned_cols=94  Identities=13%  Similarity=0.080  Sum_probs=65.5

Q ss_pred             CEEEEECCChHHHHHHHHHHHc-CCCEEEEEcCCchHHHHHHh-cCCc-----EEEcCCCCCCccHHHHHHhhcCCCccE
Q 018022          203 STVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKR-FGVT-----EFVNSKNCGDKSVSQIIIDMTDGGADY  275 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~-~g~~-----~vv~~~~~~~~~~~~~i~~~~~~g~d~  275 (362)
                      .+||++|+|. |..+..+++.. +. +|++++.+++-.+.+++ ++..     +++.      .+..+.+.+...+.||+
T Consensus        91 ~rVLdIG~G~-G~la~~la~~~p~~-~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~------~Da~~~l~~~~~~~fDv  162 (317)
T 3gjy_A           91 LRITHLGGGA-CTMARYFADVYPQS-RNTVVELDAELARLSREWFDIPRAPRVKIRV------DDARMVAESFTPASRDV  162 (317)
T ss_dssp             CEEEEESCGG-GHHHHHHHHHSTTC-EEEEEESCHHHHHHHHHHSCCCCTTTEEEEE------SCHHHHHHTCCTTCEEE
T ss_pred             CEEEEEECCc-CHHHHHHHHHCCCc-EEEEEECCHHHHHHHHHhccccCCCceEEEE------CcHHHHHhhccCCCCCE
Confidence            4899999865 66777788854 66 99999999999999886 3321     2332      33445555443448999


Q ss_pred             EEEcCCC----------HHHHHHHHHHhccCCceEEEEcc
Q 018022          276 CFECVGL----------ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       276 vid~~g~----------~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ||-....          ...++.+.+.|+++ |.+++.-.
T Consensus       163 Ii~D~~~~~~~~~~L~t~efl~~~~r~Lkpg-Gvlv~~~~  201 (317)
T 3gjy_A          163 IIRDVFAGAITPQNFTTVEFFEHCHRGLAPG-GLYVANCG  201 (317)
T ss_dssp             EEECCSTTSCCCGGGSBHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             EEECCCCccccchhhhHHHHHHHHHHhcCCC-cEEEEEec
Confidence            9864321          35678999999998 99876544

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=95.16  E-value=0.028  Score=50.10  Aligned_cols=68  Identities=18%  Similarity=0.179  Sum_probs=49.9

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      .+ +++|+|+|++|.+++..+...|+++|++++|+.+|.+.+.+ ++.   ...     .++.+.+.     .+|+||++
T Consensus       108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~---~~~-----~~~~~~~~-----~aDiVIna  173 (253)
T 3u62_A          108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKI---FSL-----DQLDEVVK-----KAKSLFNT  173 (253)
T ss_dssp             CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEE---EEG-----GGHHHHHH-----TCSEEEEC
T ss_pred             CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHccc---CCH-----HHHHhhhc-----CCCEEEEC
Confidence            45 99999999999999999999998899999999888665433 321   222     22333332     48999998


Q ss_pred             CCC
Q 018022          280 VGL  282 (362)
Q Consensus       280 ~g~  282 (362)
                      ++.
T Consensus       174 tp~  176 (253)
T 3u62_A          174 TSV  176 (253)
T ss_dssp             SST
T ss_pred             CCC
Confidence            863

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=95.15  E-value=0.095  Score=47.47  Aligned_cols=92  Identities=15%  Similarity=0.147  Sum_probs=60.0

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      .+|||+|+ |.+|...++.+...|. +|++++++..+.+ ++  +.. ++..+    -. .+.+.+... ++|+||.+++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~--~~~-~~~~D----l~-~~~~~~~~~-~~d~Vih~a~   71 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSIGNKA-IN--DYE-YRVSD----YT-LEDLINQLN-DVDAVVHLAA   71 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCC--------CCE-EEECC----CC-HHHHHHHTT-TCSEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCCccc-CC--ceE-EEEcc----cc-HHHHHHhhc-CCCEEEEccc
Confidence            57999998 9999999999999999 9999999865555 43  333 33332    23 555666554 7999999987


Q ss_pred             CH-------------HHHHHHHHHhccC-CceEEEEcc
Q 018022          282 LA-------------SLVQEAYACCRKG-WGKTIVLGV  305 (362)
Q Consensus       282 ~~-------------~~~~~~~~~l~~~-~G~iv~~G~  305 (362)
                      ..             .....+++.++.. -.+++.++.
T Consensus        72 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS  109 (311)
T 3m2p_A           72 TRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST  109 (311)
T ss_dssp             CCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence            52             1123455555543 136887764

>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}

Probab=95.14  E-value=0.2  Score=47.86  Aligned_cols=134  Identities=14%  Similarity=0.090  Sum_probs=85.3

Q ss_pred             CEEEEECCCh---HHHHHHHHHHHcC-CCEEE--EEcCCchHHHH-HHhcCCc--EEEcCCCCCCccHHHHHHhhc--CC
Q 018022          203 STVVIFGLGS---IGLAVAEGARLCG-ATRII--GVDVISEKFEI-GKRFGVT--EFVNSKNCGDKSVSQIIIDMT--DG  271 (362)
Q Consensus       203 ~~vlI~Gag~---~G~~a~~la~~~g-~~~vi--~~~~~~~~~~~-~~~~g~~--~vv~~~~~~~~~~~~~i~~~~--~~  271 (362)
                      -+|.|+|+|.   +|...+..++..+ + .++  +.+++.++.+. ++++|..  .++       .++.+.+.+..  +.
T Consensus        38 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~-~lva~v~d~~~~~a~~~a~~~g~~~~~~~-------~~~~~ll~~~~~~~~  109 (417)
T 3v5n_A           38 IRLGMVGGGSGAFIGAVHRIAARLDDHY-ELVAGALSSTPEKAEASGRELGLDPSRVY-------SDFKEMAIREAKLKN  109 (417)
T ss_dssp             EEEEEESCC--CHHHHHHHHHHHHTSCE-EEEEEECCSSHHHHHHHHHHHTCCGGGBC-------SCHHHHHHHHHHCTT
T ss_pred             ceEEEEcCCCchHHHHHHHHHHhhCCCc-EEEEEEeCCCHHHHHHHHHHcCCCccccc-------CCHHHHHhcccccCC
Confidence            4789999987   9988877777665 5 554  45777777655 5567764  222       34555554311  12


Q ss_pred             CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH------HHH-hcCcEEEEeeccCCCccccHHHHH
Q 018022          272 GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF------EVL-HSGKILMGSLFGGLKAKSDIPILL  344 (362)
Q Consensus       272 g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~------~~~-~~~~~i~g~~~~~~~~~~~l~~~l  344 (362)
                      .+|+|+.|++.....+.+..+++.  |+-|++-..     +..+..      .+. .++..+.-.+...+  ...++.+.
T Consensus       110 ~vD~V~I~tp~~~H~~~~~~al~a--GkhVl~EKP-----la~~~~ea~~l~~~a~~~g~~~~v~~~~R~--~p~~~~~k  180 (417)
T 3v5n_A          110 GIEAVAIVTPNHVHYAAAKEFLKR--GIHVICDKP-----LTSTLADAKKLKKAADESDALFVLTHNYTG--YPMVRQAR  180 (417)
T ss_dssp             CCSEEEECSCTTSHHHHHHHHHTT--TCEEEEESS-----SCSSHHHHHHHHHHHHHCSSCEEEECGGGG--SHHHHHHH
T ss_pred             CCcEEEECCCcHHHHHHHHHHHhC--CCeEEEECC-----CcCCHHHHHHHHHHHHHcCCEEEEEecccC--CHHHHHHH
Confidence            599999999988778888888888  577887542     223322      222 23454433332222  36688889


Q ss_pred             HHHHcCCcc
Q 018022          345 KRYMDKWSY  353 (362)
Q Consensus       345 ~~~~~g~l~  353 (362)
                      +++++|+|-
T Consensus       181 ~~i~~G~iG  189 (417)
T 3v5n_A          181 EMIENGDIG  189 (417)
T ss_dssp             HHHHTTTTC
T ss_pred             HHHhcCCCC
Confidence            999998773

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.13  E-value=0.062  Score=48.82  Aligned_cols=93  Identities=16%  Similarity=0.243  Sum_probs=63.5

Q ss_pred             cccchhhhHHHHHHhcCC-CCCCEEEEECCCh-HHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCc
Q 018022          182 LSCGVSTGVGAAWRTANV-EVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDK  259 (362)
Q Consensus       182 ~~~~~~ta~~~l~~~~~~-~~g~~vlI~Gag~-~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  259 (362)
                      ++|....++.. .+..++ -.|.+++|+|.|. +|..++.++...|+ +|+++.+...                      
T Consensus       145 ~PcTp~gv~~l-L~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~~~~T~----------------------  200 (300)
T 4a26_A          145 TPCTAKGVIVL-LKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENA-TVTIVHSGTS----------------------  200 (300)
T ss_dssp             CCHHHHHHHHH-HHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTSC----------------------
T ss_pred             CCCCHHHHHHH-HHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCCC----------------------
Confidence            44443434443 344443 4889999999855 89999999999999 8888875322                      


Q ss_pred             cHH--HHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022          260 SVS--QIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       260 ~~~--~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      ++.  +.++     .+|+||.++|.+..+..  ..++++ ..++.+|..
T Consensus       201 ~l~l~~~~~-----~ADIVI~Avg~p~~I~~--~~vk~G-avVIDvgi~  241 (300)
T 4a26_A          201 TEDMIDYLR-----TADIVIAAMGQPGYVKG--EWIKEG-AAVVDVGTT  241 (300)
T ss_dssp             HHHHHHHHH-----TCSEEEECSCCTTCBCG--GGSCTT-CEEEECCCE
T ss_pred             Cchhhhhhc-----cCCEEEECCCCCCCCcH--HhcCCC-cEEEEEecc
Confidence            222  3333     38999999998864433  447886 788889864

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=95.12  E-value=0.14  Score=46.64  Aligned_cols=88  Identities=17%  Similarity=0.230  Sum_probs=62.1

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  282 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~  282 (362)
                      .+|-++|.|.+|...+.-+...|+ .|++.++++++.+.+.+.|+...        .+..+.+.     ..|+||-|+..
T Consensus         4 ~kIgfIGlG~MG~~mA~~L~~~G~-~v~v~dr~~~~~~~l~~~Ga~~a--------~s~~e~~~-----~~dvv~~~l~~   69 (300)
T 3obb_A            4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGASAA--------RSARDAVQ-----GADVVISMLPA   69 (300)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEEC--------SSHHHHHT-----TCSEEEECCSC
T ss_pred             CEEEEeeehHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHcCCEEc--------CCHHHHHh-----cCCceeecCCc
Confidence            368899999999988887778899 99999999999999988886531        12222221     47888888887


Q ss_pred             HHHHHHHHH-------HhccCCceEEEEcc
Q 018022          283 ASLVQEAYA-------CCRKGWGKTIVLGV  305 (362)
Q Consensus       283 ~~~~~~~~~-------~l~~~~G~iv~~G~  305 (362)
                      ...++..+.       .++++ ..++.++.
T Consensus        70 ~~~v~~V~~~~~g~~~~~~~g-~iiId~sT   98 (300)
T 3obb_A           70 SQHVEGLYLDDDGLLAHIAPG-TLVLECST   98 (300)
T ss_dssp             HHHHHHHHHSSSSSTTSCCC--CEEEECSC
T ss_pred             hHHHHHHHhchhhhhhcCCCC-CEEEECCC
Confidence            766665543       34453 45555554

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=95.12  E-value=0.053  Score=49.61  Aligned_cols=81  Identities=10%  Similarity=0.060  Sum_probs=47.9

Q ss_pred             cCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHH--HHHHhcC--C-cEEEcCCCCCCccHHHHHHhhcC
Q 018022          197 ANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKF--EIGKRFG--V-TEFVNSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       197 ~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~--~~~~~~g--~-~~vv~~~~~~~~~~~~~i~~~~~  270 (362)
                      ..-+++.+|||+|+ |.+|...++.+...|+ +|++++++.++.  +.++.+.  . ..++..+-   .+ .+.+.++..
T Consensus         9 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl---~d-~~~~~~~~~   83 (335)
T 1rpn_A            9 HHGSMTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGIEGDIQYEDGDM---AD-ACSVQRAVI   83 (335)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTCGGGEEEEECCT---TC-HHHHHHHHH
T ss_pred             cccccCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCCccccccchhhccccCceEEEECCC---CC-HHHHHHHHH
Confidence            34567899999998 9999999999988998 999998876531  2233221  1 12232221   11 222333332


Q ss_pred             C-CccEEEEcCCC
Q 018022          271 G-GADYCFECVGL  282 (362)
Q Consensus       271 ~-g~d~vid~~g~  282 (362)
                      + ++|+||.+.+.
T Consensus        84 ~~~~d~Vih~A~~   96 (335)
T 1rpn_A           84 KAQPQEVYNLAAQ   96 (335)
T ss_dssp             HHCCSEEEECCSC
T ss_pred             HcCCCEEEECccc
Confidence            3 58999999884

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=95.10  E-value=0.12  Score=51.93  Aligned_cols=103  Identities=19%  Similarity=0.273  Sum_probs=63.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc-hH-HHHHHhcCCcEEEcCCCC--CCccHHHHHHhhcCCCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EK-FEIGKRFGVTEFVNSKNC--GDKSVSQIIIDMTDGGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~-~~-~~~~~~~g~~~vv~~~~~--~~~~~~~~i~~~~~~g~d~  275 (362)
                      .|.++||+|+ +++|++.++.+...|+ +|++.++.. ++ .+.+++.|...+....+.  ..+.+.+.+.+.. +.+|+
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~-G~iDi  398 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGA-KVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKY-GTIDI  398 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHH-SCCCE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCC-EEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhc-CCCCE
Confidence            3678899998 9999999999999999 888887532 22 234445554433333220  0011223333322 37999


Q ss_pred             EEEcCCCH-------------------------HHHHHHHHHhccC-CceEEEEcc
Q 018022          276 CFECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGV  305 (362)
Q Consensus       276 vid~~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~  305 (362)
                      +|++.|..                         ...+.++..|+.. +|+|++++.
T Consensus       399 LVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS  454 (604)
T 2et6_A          399 LVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITS  454 (604)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            99998841                         1244566666432 389999975

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=95.10  E-value=0.094  Score=47.61  Aligned_cols=74  Identities=18%  Similarity=0.220  Sum_probs=46.9

Q ss_pred             CCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEE
Q 018022          199 VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYC  276 (362)
Q Consensus       199 ~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~v  276 (362)
                      .++-.+|||+|+ |.+|...++.+...|+ +|++++++.++ +.   ++.. ++..+-   .+ .+.+.++..+ ++|+|
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~-~~---l~~~-~~~~Dl---~d-~~~~~~~~~~~~~d~v   78 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNV-EVFGTSRNNEA-KL---PNVE-MISLDI---MD-SQRVKKVISDIKPDYI   78 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCTTC-CC---TTEE-EEECCT---TC-HHHHHHHHHHHCCSEE
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCC-EEEEEecCCcc-cc---ceee-EEECCC---CC-HHHHHHHHHhcCCCEE
Confidence            355678999998 9999999999988999 99999987665 21   2332 222221   11 2223333222 68999


Q ss_pred             EEcCCC
Q 018022          277 FECVGL  282 (362)
Q Consensus       277 id~~g~  282 (362)
                      |.+++.
T Consensus        79 ih~A~~   84 (321)
T 2pk3_A           79 FHLAAK   84 (321)
T ss_dssp             EECCSC
T ss_pred             EEcCcc
Confidence            999884

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=95.09  E-value=0.16  Score=48.34  Aligned_cols=109  Identities=16%  Similarity=0.128  Sum_probs=70.7

Q ss_pred             hHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-----------cCC--cE--EEcC
Q 018022          189 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----------FGV--TE--FVNS  253 (362)
Q Consensus       189 a~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----------~g~--~~--vv~~  253 (362)
                      .+..+....+++++++||=+|+|. |..++++|+..|..++++++.+++-.+++++           +|.  ..  ++..
T Consensus       161 ~i~~il~~l~l~~gd~VLDLGCGt-G~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~G  239 (438)
T 3uwp_A          161 LVAQMIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERG  239 (438)
T ss_dssp             HHHHHHHHHCCCTTCEEEEESCTT-SHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEEC
T ss_pred             HHHHHHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEEC
Confidence            344466778999999999999875 7788888888898679999999865554432           343  22  3332


Q ss_pred             CCCCCccHHHHHHhhcCCCccEEEEcCC--C---HHHHHHHHHHhccCCceEEEEcc
Q 018022          254 KNCGDKSVSQIIIDMTDGGADYCFECVG--L---ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       254 ~~~~~~~~~~~i~~~~~~g~d~vid~~g--~---~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      +-   .++.  ..+.. ..+|+|+-..-  .   ...+...++.|++| |+|+..-.
T Consensus       240 D~---~~lp--~~d~~-~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPG-GrIVssE~  289 (438)
T 3uwp_A          240 DF---LSEE--WRERI-ANTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSKP  289 (438)
T ss_dssp             CT---TSHH--HHHHH-HTCSEEEECCTTCCHHHHHHHHHHHTTSCTT-CEEEESSC
T ss_pred             cc---cCCc--ccccc-CCccEEEEcccccCchHHHHHHHHHHcCCCC-cEEEEeec
Confidence            22   2211  11111 14899985211  1   23466788899998 99998743

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.08  E-value=0.059  Score=48.62  Aligned_cols=93  Identities=17%  Similarity=0.255  Sum_probs=63.8

Q ss_pred             cccchhhhHHHHHHhcCC-CCCCEEEEECCCh-HHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCc
Q 018022          182 LSCGVSTGVGAAWRTANV-EVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDK  259 (362)
Q Consensus       182 ~~~~~~ta~~~l~~~~~~-~~g~~vlI~Gag~-~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  259 (362)
                      ++|.....+. +.+..++ -.|.+++|+|.|. +|..+++++...|+ +|+++.+.                   .   .
T Consensus       141 ~PcTp~gv~~-lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~-------------------t---~  196 (285)
T 3l07_A          141 ESCTPKGIMT-MLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKA-TVTTCHRF-------------------T---T  196 (285)
T ss_dssp             CCHHHHHHHH-HHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTT-------------------C---S
T ss_pred             CCCCHHHHHH-HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCC-------------------c---h
Confidence            4444333443 2344444 3789999999855 89999999999999 78777542                   1   3


Q ss_pred             cHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022          260 SVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       260 ~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      ++.+.++     .+|++|.++|.+..+..  +.++++ ..++.+|..
T Consensus       197 ~L~~~~~-----~ADIVI~Avg~p~~I~~--~~vk~G-avVIDvgi~  235 (285)
T 3l07_A          197 DLKSHTT-----KADILIVAVGKPNFITA--DMVKEG-AVVIDVGIN  235 (285)
T ss_dssp             SHHHHHT-----TCSEEEECCCCTTCBCG--GGSCTT-CEEEECCCE
T ss_pred             hHHHhcc-----cCCEEEECCCCCCCCCH--HHcCCC-cEEEEeccc
Confidence            3444443     48999999998864432  457886 788889864

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=95.08  E-value=0.12  Score=44.61  Aligned_cols=100  Identities=19%  Similarity=0.309  Sum_probs=68.0

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCC-cEEEcCCCCCCccHHHHHHhhc
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV-TEFVNSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~-~~vv~~~~~~~~~~~~~i~~~~  269 (362)
                      ....++++++||=+|+|..|..+..+++..+. +|++++.+++.++.+++    .+. ..++..+-   ..+    ..+.
T Consensus        49 ~~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~---~~~----~~~~  120 (230)
T 3evz_A           49 LKTFLRGGEVALEIGTGHTAMMALMAEKFFNC-KVTATEVDEEFFEYARRNIERNNSNVRLVKSNG---GII----KGVV  120 (230)
T ss_dssp             HHTTCCSSCEEEEECCTTTCHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHTTCCCEEEECSS---CSS----TTTC
T ss_pred             hHhhcCCCCEEEEcCCCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCc---hhh----hhcc
Confidence            34456789999999998568888888887666 99999999998877764    343 23343321   011    1122


Q ss_pred             CCCccEEEEcCC----------------------C---HHHHHHHHHHhccCCceEEEE
Q 018022          270 DGGADYCFECVG----------------------L---ASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       270 ~~g~d~vid~~g----------------------~---~~~~~~~~~~l~~~~G~iv~~  303 (362)
                      .+.||+|+-...                      .   ...+..+.+.|+++ |+++++
T Consensus       121 ~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~  178 (230)
T 3evz_A          121 EGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPG-GKVALY  178 (230)
T ss_dssp             CSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEE-EEEEEE
T ss_pred             cCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCC-eEEEEE
Confidence            247999995421                      0   34578888999998 999886

>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*

Probab=95.08  E-value=0.16  Score=48.93  Aligned_cols=136  Identities=14%  Similarity=0.080  Sum_probs=83.6

Q ss_pred             CEEEEECCChHHHHHHHHHHHc-CCCEEEEEcCCchHHHHHH----hcCC--cEEEcCCCCCCccHHHHHHhhcCCCccE
Q 018022          203 STVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGK----RFGV--TEFVNSKNCGDKSVSQIIIDMTDGGADY  275 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~-g~~~vi~~~~~~~~~~~~~----~~g~--~~vv~~~~~~~~~~~~~i~~~~~~g~d~  275 (362)
                      -+|.|+|+|.+|...+...+.. +++.+.+.++++++.+.+.    ++|.  ..++....   .++.+.+.   ...+|+
T Consensus        21 ~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~---~~~~~ll~---~~~vD~   94 (444)
T 2ixa_A           21 VRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGN---DDYKNMLK---DKNIDA   94 (444)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSST---TTHHHHTT---CTTCCE
T ss_pred             ceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCC---CCHHHHhc---CCCCCE
Confidence            4789999999998877766654 6644556677777776543    3454  34443111   23333322   126999


Q ss_pred             EEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH------HH-HhcCcEEEEeeccCCCccccHHHHHHHHH
Q 018022          276 CFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF------EV-LHSGKILMGSLFGGLKAKSDIPILLKRYM  348 (362)
Q Consensus       276 vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~------~~-~~~~~~i~g~~~~~~~~~~~l~~~l~~~~  348 (362)
                      |+.|++.....+.+..+|+.  |+-|++-.     ++..+..      .+ -.++..+.-.+...  ....+..+.++++
T Consensus        95 V~i~tp~~~h~~~~~~al~a--GkhV~~EK-----P~a~~~~ea~~l~~~a~~~g~~~~v~~~~r--~~p~~~~~~~~i~  165 (444)
T 2ixa_A           95 VFVSSPWEWHHEHGVAAMKA--GKIVGMEV-----SGAITLEECWDYVKVSEQTGVPLMALENVC--YRRDVMAILNMVR  165 (444)
T ss_dssp             EEECCCGGGHHHHHHHHHHT--TCEEEECC-----CCCSSHHHHHHHHHHHHHHCCCEEECCGGG--GCHHHHHHHHHHH
T ss_pred             EEEcCCcHHHHHHHHHHHHC--CCeEEEeC-----CCcCCHHHHHHHHHHHHHhCCeEEEEeccc--cCHHHHHHHHHHH
Confidence            99999988778888899988  57777743     2222322      12 22354443222222  1355788889999


Q ss_pred             cCCcc
Q 018022          349 DKWSY  353 (362)
Q Consensus       349 ~g~l~  353 (362)
                      +|.|-
T Consensus       166 ~G~iG  170 (444)
T 2ixa_A          166 KGMFG  170 (444)
T ss_dssp             TTTTC
T ss_pred             cCCCC
Confidence            88764

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=95.05  E-value=0.055  Score=49.78  Aligned_cols=96  Identities=13%  Similarity=0.117  Sum_probs=64.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc-C-----C--c--EEEcCCCCCCccHHHHHHhhc
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-G-----V--T--EFVNSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-g-----~--~--~vv~~~~~~~~~~~~~i~~~~  269 (362)
                      ..+.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++. .     .  +  +++.      .+..+.+.. .
T Consensus       107 ~~~~~VLdIG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~------~D~~~~l~~-~  178 (314)
T 2b2c_A          107 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFC------GDGFEFLKN-H  178 (314)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEEC------SCHHHHHHH-C
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEE------ChHHHHHHh-c
Confidence            4568999998865 66666777765555999999999998888763 1     1  1  2222      334444443 3


Q ss_pred             CCCccEEEEcCCC----------HHHHHHHHHHhccCCceEEEEc
Q 018022          270 DGGADYCFECVGL----------ASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       270 ~~g~d~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      .+.||+||-....          ...++.+.+.|+++ |.+++-.
T Consensus       179 ~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~Lkpg-G~lv~~~  222 (314)
T 2b2c_A          179 KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQG  222 (314)
T ss_dssp             TTCEEEEEECCC-------------HHHHHHHHEEEE-EEEEEEC
T ss_pred             CCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCC-eEEEEEC
Confidence            3479999964421          35577899999998 9998765

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=95.04  E-value=0.11  Score=47.75  Aligned_cols=77  Identities=17%  Similarity=0.166  Sum_probs=46.9

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc----------hHHHHHHh-cCC-cEEEcCCCCCCccHHHHHHhh
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS----------EKFEIGKR-FGV-TEFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~----------~~~~~~~~-~g~-~~vv~~~~~~~~~~~~~i~~~  268 (362)
                      +.+|||+|+ |.+|...++.+...|+ +|++++++.          +..+.+++ .+. -+++..+-.+.+.+.+.+.+.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGY-LPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTC-CEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc
Confidence            357999998 9999999998888898 888887642          33333333 221 123322210012222333221


Q ss_pred             cCCCccEEEEcCCC
Q 018022          269 TDGGADYCFECVGL  282 (362)
Q Consensus       269 ~~~g~d~vid~~g~  282 (362)
                         ++|+||.+.+.
T Consensus        81 ---~~d~vih~A~~   91 (348)
T 1ek6_A           81 ---SFMAVIHFAGL   91 (348)
T ss_dssp             ---CEEEEEECCSC
T ss_pred             ---CCCEEEECCCC
Confidence               69999999884

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=95.03  E-value=0.052  Score=49.80  Aligned_cols=73  Identities=14%  Similarity=0.108  Sum_probs=48.3

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      -+|||+|+ |.+|...++.+...|+ +|++++++.++.+.+.+.+... +..+-   .+ .+.+.+... ++|+||.+.+
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~-~~~Dl---~d-~~~~~~~~~-~~d~vih~a~   86 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLAYLEPEC-RVAEM---LD-HAGLERALR-GLDGVIFSAG   86 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGGGGCCEE-EECCT---TC-HHHHHHHTT-TCSEEEEC--
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhccCCeEE-EEecC---CC-HHHHHHHHc-CCCEEEECCc
Confidence            37999998 9999999999998998 9999998876654443334433 32221   11 234444443 5999999988


Q ss_pred             C
Q 018022          282 L  282 (362)
Q Consensus       282 ~  282 (362)
                      .
T Consensus        87 ~   87 (342)
T 2x4g_A           87 Y   87 (342)
T ss_dssp             -
T ss_pred             c
Confidence            4

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=95.03  E-value=0.13  Score=50.18  Aligned_cols=85  Identities=16%  Similarity=0.178  Sum_probs=55.2

Q ss_pred             CCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchH-------HHHHHhcCCcE-EEcCCCCCCccHHHHHHhh
Q 018022          198 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-------FEIGKRFGVTE-FVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       198 ~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~-------~~~~~~~g~~~-vv~~~~~~~~~~~~~i~~~  268 (362)
                      .++++.++||+|+ |++|...++.+...|+++|+.++++...       .+.+++.|... ++.-+-.+.+.+.+.+.+.
T Consensus       222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i  301 (486)
T 2fr1_A          222 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI  301 (486)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             CcCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH
Confidence            3578899999988 9999999888888899679999887641       12344556532 2222210123344444444


Q ss_pred             cCC-CccEEEEcCCC
Q 018022          269 TDG-GADYCFECVGL  282 (362)
Q Consensus       269 ~~~-g~d~vid~~g~  282 (362)
                      ... .+|.||.+.|.
T Consensus       302 ~~~g~ld~VIh~AG~  316 (486)
T 2fr1_A          302 GDDVPLSAVFHAAAT  316 (486)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             HhcCCCcEEEECCcc
Confidence            222 68999999984

>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38

Probab=95.02  E-value=0.22  Score=45.65  Aligned_cols=101  Identities=17%  Similarity=0.205  Sum_probs=67.9

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHh----cCCc--EEEcCCCCCCccHHHHHHh
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIIID  267 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~g~~--~vv~~~~~~~~~~~~~i~~  267 (362)
                      ....++++++||=.|+|+ |..+..++..++ ..+|++++.++.+++.+++    +|..  .++..+.   .++.    .
T Consensus       112 ~~l~~~~g~~VLDlg~G~-G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~---~~~~----~  183 (315)
T 1ixk_A          112 VALDPKPGEIVADMAAAP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSS---LHIG----E  183 (315)
T ss_dssp             HHHCCCTTCEEEECCSSC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCG---GGGG----G
T ss_pred             HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECCh---hhcc----c
Confidence            456788999999888865 666667777653 2399999999999887764    3553  3443322   2221    1


Q ss_pred             hcCCCccEEEE---cCCC-------------------------HHHHHHHHHHhccCCceEEEEcc
Q 018022          268 MTDGGADYCFE---CVGL-------------------------ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       268 ~~~~g~d~vid---~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                       ..+.||.|+-   |+|.                         ...+..+.+.|+++ |+++....
T Consensus       184 -~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpG-G~lv~stc  247 (315)
T 1ixk_A          184 -LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPG-GILVYSTC  247 (315)
T ss_dssp             -GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEES
T ss_pred             -ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEEeC
Confidence             2337999886   3332                         24567899999998 99987644

>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6

Probab=95.00  E-value=0.13  Score=47.63  Aligned_cols=67  Identities=19%  Similarity=0.140  Sum_probs=50.7

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchH-HHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK-FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~-~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      .+|.|+|+|.+|.+.++.++..|. +|++.+++.++ .+.+++.|... .   +     +.+.+.     ..|+||-++.
T Consensus        17 ~~I~IIG~G~mG~alA~~L~~~G~-~V~~~~~~~~~~~~~a~~~G~~~-~---~-----~~e~~~-----~aDvVilavp   81 (338)
T 1np3_A           17 KKVAIIGYGSQGHAHACNLKDSGV-DVTVGLRSGSATVAKAEAHGLKV-A---D-----VKTAVA-----AADVVMILTP   81 (338)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECCTTCHHHHHHHHTTCEE-E---C-----HHHHHH-----TCSEEEECSC
T ss_pred             CEEEEECchHHHHHHHHHHHHCcC-EEEEEECChHHHHHHHHHCCCEE-c---c-----HHHHHh-----cCCEEEEeCC
Confidence            479999999999999999999998 78888887765 67777788642 2   1     223332     4799999988


Q ss_pred             CHH
Q 018022          282 LAS  284 (362)
Q Consensus       282 ~~~  284 (362)
                      ...
T Consensus        82 ~~~   84 (338)
T 1np3_A           82 DEF   84 (338)
T ss_dssp             HHH
T ss_pred             cHH
Confidence            764

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=95.00  E-value=0.14  Score=45.92  Aligned_cols=97  Identities=13%  Similarity=0.091  Sum_probs=66.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc------CC----cEEEcCCCCCCccHHHHHHhhc
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF------GV----TEFVNSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~------g~----~~vv~~~~~~~~~~~~~i~~~~  269 (362)
                      ..+.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.      +.    -+++..+      ..+.+.+ .
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D------~~~~l~~-~  145 (275)
T 1iy9_A           74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDD------GFMHIAK-S  145 (275)
T ss_dssp             SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESC------SHHHHHT-C
T ss_pred             CCCCEEEEECCch-HHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECc------HHHHHhh-C
Confidence            4578999998864 56666777766766999999999988888752      21    1333322      2333433 2


Q ss_pred             CCCccEEEEcCCC----------HHHHHHHHHHhccCCceEEEEcc
Q 018022          270 DGGADYCFECVGL----------ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       270 ~~g~d~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      .+.||+|+-....          ...++.+.+.|+++ |.+++...
T Consensus       146 ~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pg-G~lv~~~~  190 (275)
T 1iy9_A          146 ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQTD  190 (275)
T ss_dssp             CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEECC
T ss_pred             CCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEcC
Confidence            3479999975432          35688999999998 99988743

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=94.99  E-value=0.15  Score=50.00  Aligned_cols=84  Identities=15%  Similarity=0.209  Sum_probs=54.4

Q ss_pred             CCCC--CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCch-------HHHHHHhcCCcEE-EcCCCCCCccHHHHHHh
Q 018022          199 VEVG--STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-------KFEIGKRFGVTEF-VNSKNCGDKSVSQIIID  267 (362)
Q Consensus       199 ~~~g--~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~-------~~~~~~~~g~~~v-v~~~~~~~~~~~~~i~~  267 (362)
                      ++++  .++||+|+ |++|...++.+...|+++++.+.++..       -.+.+++.|.... +.-+-.+.+.+.+.+.+
T Consensus       234 ~~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~  313 (496)
T 3mje_A          234 KRPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAE  313 (496)
T ss_dssp             CCCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             CCCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            3455  89999987 999999998888899878888887632       1233455665432 22221012334444444


Q ss_pred             hcCC-CccEEEEcCCC
Q 018022          268 MTDG-GADYCFECVGL  282 (362)
Q Consensus       268 ~~~~-g~d~vid~~g~  282 (362)
                      +... ++|++|.+.|.
T Consensus       314 i~~~g~ld~vVh~AGv  329 (496)
T 3mje_A          314 LPEDAPLTAVFHSAGV  329 (496)
T ss_dssp             CCTTSCEEEEEECCCC
T ss_pred             HHHhCCCeEEEECCcc
Confidence            4333 79999999885

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=94.98  E-value=0.049  Score=49.54  Aligned_cols=86  Identities=20%  Similarity=0.150  Sum_probs=59.2

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  282 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~  282 (362)
                      .+|.|+|.|.+|...++.+...|+ +|++.++++++.+.+.+.|+...        .++.+    ...  .|+||.|++.
T Consensus        16 ~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~~----~~~--aDvvi~~vp~   80 (296)
T 3qha_A           16 LKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRIEAMTPLAEAGATLA--------DSVAD----VAA--ADLIHITVLD   80 (296)
T ss_dssp             CCEEEECCSTTHHHHHHHHTTSTT-CEEEECSSTTTSHHHHHTTCEEC--------SSHHH----HTT--SSEEEECCSS
T ss_pred             CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCEEc--------CCHHH----HHh--CCEEEEECCC
Confidence            479999999999999988888898 89999999999988888775321        12222    222  6888888886


Q ss_pred             HHHHHH----HHHHhccCCceEEEEc
Q 018022          283 ASLVQE----AYACCRKGWGKTIVLG  304 (362)
Q Consensus       283 ~~~~~~----~~~~l~~~~G~iv~~G  304 (362)
                      +..+..    +...++++ ..++..+
T Consensus        81 ~~~~~~v~~~l~~~l~~g-~ivv~~s  105 (296)
T 3qha_A           81 DAQVREVVGELAGHAKPG-TVIAIHS  105 (296)
T ss_dssp             HHHHHHHHHHHHTTCCTT-CEEEECS
T ss_pred             hHHHHHHHHHHHHhcCCC-CEEEEeC
Confidence            643433    33344553 4444444

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=94.97  E-value=0.08  Score=51.25  Aligned_cols=105  Identities=15%  Similarity=0.211  Sum_probs=71.2

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHc-CC--CEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCc
Q 018022          197 ANVEVGSTVVIFGLGSIGLAVAEGARLC-GA--TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGA  273 (362)
Q Consensus       197 ~~~~~g~~vlI~Gag~~G~~a~~la~~~-g~--~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~  273 (362)
                      .++....+|+|+|+|++|..++.++... ++  ..|++++..+.+.++.+..|.......-+  ..+..+.+..+..++ 
T Consensus         8 ~~~~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vd--adnv~~~l~aLl~~~-   84 (480)
T 2ph5_A            8 KKILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQIT--PQNYLEVIGSTLEEN-   84 (480)
T ss_dssp             TCBCCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCC--TTTHHHHTGGGCCTT-
T ss_pred             ceecCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEecc--chhHHHHHHHHhcCC-
Confidence            4456677899999999999998877754 44  36888888777666666667533221111  144555565566554 


Q ss_pred             cEEEEcCCCHHHHHHHHHHhccCCceEEEEcc
Q 018022          274 DYCFECVGLASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       274 d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      |+||+++-....+..+-.|++.+ -.++....
T Consensus        85 DvVIN~s~~~~~l~Im~acleaG-v~YlDTa~  115 (480)
T 2ph5_A           85 DFLIDVSIGISSLALIILCNQKG-ALYINAAT  115 (480)
T ss_dssp             CEEEECCSSSCHHHHHHHHHHHT-CEEEESSC
T ss_pred             CEEEECCccccCHHHHHHHHHcC-CCEEECCC
Confidence            99999876655566777777776 66677664

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=94.95  E-value=0.037  Score=48.80  Aligned_cols=83  Identities=18%  Similarity=0.125  Sum_probs=49.1

Q ss_pred             CCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEc-CCchHHH----HHHhcCCc-EEEcCCCCCCccHHHHHHhhc--
Q 018022          199 VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISEKFE----IGKRFGVT-EFVNSKNCGDKSVSQIIIDMT--  269 (362)
Q Consensus       199 ~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~-~~~~~~~----~~~~~g~~-~vv~~~~~~~~~~~~~i~~~~--  269 (362)
                      ..++.++||+|+ |++|.+.+..+...|+ +|++++ ++.++.+    .+++.+.. .++..+-.+.+++.+.+.++.  
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGF-RVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAE   88 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTE-EEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence            456788999998 9999999999999999 777766 4444332    23334432 233222101123333333322  


Q ss_pred             CCCccEEEEcCCC
Q 018022          270 DGGADYCFECVGL  282 (362)
Q Consensus       270 ~~g~d~vid~~g~  282 (362)
                      -+++|++|.+.|.
T Consensus        89 ~g~id~lv~~Ag~  101 (256)
T 3ezl_A           89 VGEIDVLVNNAGI  101 (256)
T ss_dssp             TCCEEEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            1379999999884

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=94.95  E-value=0.23  Score=47.93  Aligned_cols=41  Identities=24%  Similarity=0.319  Sum_probs=37.1

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR  244 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~  244 (362)
                      -+|.|+|+|.+|+..+..+...|. .|+++++++++.+.+++
T Consensus         3 mkI~VIG~G~vG~~lA~~La~~G~-~V~~~D~~~~~v~~l~~   43 (450)
T 3gg2_A            3 LDIAVVGIGYVGLVSATCFAELGA-NVRCIDTDRNKIEQLNS   43 (450)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHH
T ss_pred             CEEEEECcCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHc
Confidence            368999999999999888888899 99999999999988877

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=94.94  E-value=0.17  Score=49.00  Aligned_cols=95  Identities=7%  Similarity=-0.005  Sum_probs=58.1

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      +.+|+|+|+|.+|.+++..+...|. +|++++++.++.+.+.+ ++....+..+-   .+. +.+.++.. ++|+||.++
T Consensus         3 ~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~~~a~~la~~~~~~~~~~~Dv---~d~-~~l~~~l~-~~DvVIn~a   76 (450)
T 1ff9_A            3 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDV---NDD-AALDAEVA-KHDLVISLI   76 (450)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSHHHHHHTTTTCTTEEEEECCT---TCH-HHHHHHHT-TSSEEEECC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCHHHHHHHHHhcCCceEEEeec---CCH-HHHHHHHc-CCcEEEECC
Confidence            5689999999999999988888898 79999998887765443 43222221111   111 22333332 699999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEE
Q 018022          281 GLASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       281 g~~~~~~~~~~~l~~~~G~iv~~  303 (362)
                      +..........++..+ -.++..
T Consensus        77 ~~~~~~~i~~a~l~~g-~~vvd~   98 (450)
T 1ff9_A           77 PYTFHATVIKSAIRQK-KHVVTT   98 (450)
T ss_dssp             C--CHHHHHHHHHHHT-CEEEES
T ss_pred             ccccchHHHHHHHhCC-CeEEEe
Confidence            8643233344555553 344433

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=94.94  E-value=0.11  Score=47.02  Aligned_cols=68  Identities=22%  Similarity=0.278  Sum_probs=38.8

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      +.+|||+|+ |.+|...++.+...|+ +|++++++.++.      + ....|-.+  .+.+.+.+...   ++|+||.+.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~------~-~~~~Dl~d--~~~~~~~~~~~---~~d~vih~A   68 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNW-HAVGCGFRRARP------K-FEQVNLLD--SNAVHHIIHDF---QPHVIVHCA   68 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEC---------------------------CHHHHHHH---CCSEEEECC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCC-eEEEEccCCCCC------C-eEEecCCC--HHHHHHHHHhh---CCCEEEECC
Confidence            468999998 9999999999988998 999998765431      1 11112111  12333333332   589999998


Q ss_pred             CC
Q 018022          281 GL  282 (362)
Q Consensus       281 g~  282 (362)
                      +.
T Consensus        69 ~~   70 (315)
T 2ydy_A           69 AE   70 (315)
T ss_dssp             --
T ss_pred             cc
Confidence            74

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=94.93  E-value=0.037  Score=48.12  Aligned_cols=73  Identities=15%  Similarity=0.229  Sum_probs=47.0

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhc-CCCccEEEEc
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT-DGGADYCFEC  279 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~-~~g~d~vid~  279 (362)
                      +.++||+|+ |.+|.+.++.+...|+ +|++++++.+ .   +++   .++..+-.+.+++.+.+.+.. .+++|++|.+
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~-~---~~~---~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~   73 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRRE-G---EDL---IYVEGDVTREEDVRRAVARAQEEAPLFAVVSA   73 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCC-S---SSS---EEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEccCcc-c---cce---EEEeCCCCCHHHHHHHHHHHHhhCCceEEEEc
Confidence            568999998 9999999998888899 8999988765 1   111   233222101233333333331 1268999998


Q ss_pred             CCC
Q 018022          280 VGL  282 (362)
Q Consensus       280 ~g~  282 (362)
                      .|.
T Consensus        74 ag~   76 (242)
T 1uay_A           74 AGV   76 (242)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	362
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	1e-41
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	1e-37
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	7e-37
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	8e-37
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	6e-36
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	3e-33
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	5e-33
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	4e-32
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	4e-31
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	2e-30
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	2e-30
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	1e-28
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	7e-22
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	2e-19
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	4e-19
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	7e-19
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	5e-18
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	2e-17
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	2e-17
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	2e-14
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	2e-14
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	6e-13
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	1e-12
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	1e-12
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	2e-12
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	6e-12
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	8e-12
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	4e-11
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	3e-09
d1e3ja2	170	c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh	2e-08
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	7e-07
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	7e-06
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	1e-05
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	0.002

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score =  142 bits (359), Expect = 1e-41
 Identities = 70/199 (35%), Positives = 109/199 (54%), Gaps = 1/199 (0%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           T GK I+C+AA+A    +PLVI+E+ VD P+++E+R++II T +CH+D+           
Sbjct: 2   TVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDG 61

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FP +LGHE  G+VESVG  V     G+ VIP F++ C EC  C+S K N C       SP
Sbjct: 62  FPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESP 121

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
            +   + +RF   +G  +  F+  S+FS+YTV++   V K+DP+V  +        + + 
Sbjct: 122 DVMSPKETRF-TCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESV 180

Query: 190 VGAAWRTANVEVGSTVVIF 208
             A     + +   TV+  
Sbjct: 181 NDAIDLMKHGKCIRTVLSL 199

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  131 bits (330), Expect = 1e-37
 Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 2/177 (1%)

Query: 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVD 233
            PP + CL+ CG STG GAA +T  V+ GST V+FGLG +GL+V  G +  GA+RIIG+D
Sbjct: 2   APPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGID 61

Query: 234 VISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACC 293
           +  +KFE     G TE ++ K+   K +S+++ +MT     Y FE +G    + +A A C
Sbjct: 62  LNKDKFEKAMAVGATECISPKD-STKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASC 120

Query: 294 RKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
              +G ++V+GV      L+     +L +G+   G +FGGLK++ D+P L+  ++ K
Sbjct: 121 HMNYGTSVVVGVPPSAKMLTYDPM-LLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 176

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  129 bits (326), Expect = 7e-37
 Identities = 76/197 (38%), Positives = 107/197 (54%), Gaps = 1/197 (0%)

Query: 11  AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF 70
           A + I+C+AA+A   G+PL I+E+ V PP +HEVR++II T++CH+D       D    F
Sbjct: 1   ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 60

Query: 71  PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
           P ILGH   G+VESVGE V  +  GD VIP ++  C EC  C + K NLC          
Sbjct: 61  PVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120

Query: 131 MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGV 190
           +  D TSRF   +G+TI H++  S+FSEYTV+    V K+DP +  +     +       
Sbjct: 121 LMPDGTSRF-TCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEIN 179

Query: 191 GAAWRTANVEVGSTVVI 207
            A     + +   TVV 
Sbjct: 180 KAFELMHSGKSIRTVVK 196

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score =  130 bits (326), Expect = 8e-37
 Identities = 74/208 (35%), Positives = 108/208 (51%), Gaps = 12/208 (5%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I C+AA+A  P +PL ++ + V PP +HEVR++I+ + +C SD +    +  P+ 
Sbjct: 2   TAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVL-KEIIPSK 60

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
           FP ILGHEA+GVVES+G  V  V  GD VIP F+  C  C  C+S   N C         
Sbjct: 61  FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKT 120

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
            +  D TSRF   RG+ I++ +  S+F+EYTV+    V K+DP +  N            
Sbjct: 121 GLMADMTSRFT-CRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFL---------- 169

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAV 217
           V        +     ++  G G   + +
Sbjct: 170 VSTKLTLDQINKAFELLSSGQGVRSIMI 197

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score =  126 bits (318), Expect = 6e-36
 Identities = 70/175 (40%), Positives = 98/175 (56%), Gaps = 3/175 (1%)

Query: 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235
           P  +CL+ CG +TG GAA  TA V  GST  +FGLG +G +   G +  GA+RIIGV   
Sbjct: 2   PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTH 61

Query: 236 SEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRK 295
            +KF      G TE +N K+  DK + ++I + T+GG DY  EC G    +  A      
Sbjct: 62  KDKFPKAIELGATECLNPKD-YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYC 120

Query: 296 GWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
           G G T+VLG+  P  +L L    +L +G+ L GS+FGG K + ++  L+  YM K
Sbjct: 121 GSGVTVVLGLASPNERLPLDPL-LLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKK 173

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score =  119 bits (299), Expect = 3e-33
 Identities = 68/176 (38%), Positives = 107/176 (60%), Gaps = 2/176 (1%)

Query: 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV 234
           P  + CL+ CG STG G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+
Sbjct: 2   PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDI 61

Query: 235 ISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCR 294
             +KF   K  G TE VN ++   K + +++ +M++GG D+ FE +G    +  A +CC+
Sbjct: 62  NKDKFAKAKEVGATECVNPQD-YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQ 120

Query: 295 KGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
           + +G ++++G   P SQ    +  +L SG+   G++FGG K+K  +P L+  +M K
Sbjct: 121 EAYGVSVIVG-VPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 175

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score =  119 bits (300), Expect = 5e-33
 Identities = 69/201 (34%), Positives = 102/201 (50%), Gaps = 7/201 (3%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           T GK I+C+AAIA   G PL I+E+ V PP + EVR+++I T +C +D+         A+
Sbjct: 2   TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINAT-DPKKKAL 60

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLC---SAFPFK 126
           FP +LGHE  G+VESVG  V     GD VIP F   C  C  C S   NLC     F + 
Sbjct: 61  FPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYP 120

Query: 127 ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 186
                  +  +     +G +I+HF+ VSSFS+YTV+  A++ +VD     +     +   
Sbjct: 121 TIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPF 180

Query: 187 STGVGAAWRTANVEVGSTVVI 207
            +   A      ++ G ++  
Sbjct: 181 ESINDAI---DLMKEGKSIRT 198

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score =  117 bits (294), Expect = 4e-32
 Identities = 73/200 (36%), Positives = 100/200 (50%), Gaps = 5/200 (2%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD            
Sbjct: 2   TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSG-TLVTP 60

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P I GHEA G+VES+GE V  V  GD VIP F   C +C  C+  +GN C      +  
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
              +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D          L   V   
Sbjct: 121 GTMQDGTSRF-TCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFA---LDPLITHVLPF 176

Query: 190 VGAAWRTANVEVGSTVVIFG 209
                    +  G ++    
Sbjct: 177 EKINEGFDLLRSGESIRTIL 196

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score =  114 bits (285), Expect = 4e-31
 Identities = 66/176 (37%), Positives = 100/176 (56%), Gaps = 4/176 (2%)

Query: 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV 234
              R CL+ CG S+G GAA  TA V  GST  +FGLG +GL+   G ++ GA+RII +D+
Sbjct: 2   NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDI 61

Query: 235 ISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCR 294
             EKF   K  G T+ +N +   DK V  +I ++T GG DY  +C G A  ++ A  C  
Sbjct: 62  NGEKFPKAKALGATDCLNPREL-DKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTV 120

Query: 295 KGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
            GWG   V+G      ++++ + +V+  G+ + G+ FGG K+   +P L+  Y +K
Sbjct: 121 LGWGSCTVVGA--KVDEMTIPTVDVIL-GRSINGTFFGGWKSVDSVPNLVSDYKNK 173

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  112 bits (281), Expect = 2e-30
 Identities = 78/176 (44%), Positives = 113/176 (64%), Gaps = 2/176 (1%)

Query: 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV 234
           P ++ CLL CG+STG GAA  TA +E GS   +FGLG +GLAV  G ++ GA+RIIGVD+
Sbjct: 2   PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDI 61

Query: 235 ISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCR 294
             +KF   K FG TE +N ++   K + +++I+MTDGG DY FEC+G   +++ A   C 
Sbjct: 62  NKDKFARAKEFGATECINPQD-FSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACH 120

Query: 295 KGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
           KGWG ++V+GV   G +++   F  L +G+   G+ FGG K+   +P L+  YM K
Sbjct: 121 KGWGVSVVVGVAASGEEIATRPF-QLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 175

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score =  112 bits (280), Expect = 2e-30
 Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 4/176 (2%)

Query: 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVD 233
           VP      L CG+ TG GA      V   S+ V +G G++GL+    A++CGA+ II VD
Sbjct: 1   VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVD 60

Query: 234 VISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACC 293
           ++  + E+ K+ G T  +NSK    +     I ++TDGG ++  E  G   ++++     
Sbjct: 61  IVESRLELAKQLGATHVINSK---TQDPVAAIKEITDGGVNFALESTGSPEILKQGVDAL 117

Query: 294 RKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMD 349
               GK  V+G  Q G+       ++L  GK ++G + G    K  IP L++ Y  
Sbjct: 118 GI-LGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQ 172

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score =  107 bits (267), Expect = 1e-28
 Identities = 77/176 (43%), Positives = 106/176 (60%), Gaps = 3/176 (1%)

Query: 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV 234
           P +  CLL CGVSTG GAA  TA VE GST  +FGLG++GLA   G    GA RII VD+
Sbjct: 2   PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDL 61

Query: 235 ISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCR 294
             +KFE  K FG T+FVN  +   + +SQ++  MT+GG D+  ECVG   +++ A   C 
Sbjct: 62  NPDKFEKAKVFGATDFVNPND-HSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCL 120

Query: 295 KGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 350
           KGWG ++++G          +    L +G+   GS+FGG K K  +P ++K Y+DK
Sbjct: 121 KGWGVSVLVGW--TDLHDVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDK 174

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 89.6 bits (221), Expect = 7e-22
 Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 3/191 (1%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
            AA+    G    +  + +  P   EV V+++ T +CH+D+     K      P +LGHE
Sbjct: 5   IAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPV-PLPAVLGHE 63

Query: 78  AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTS 137
             G++E++G NV  +  GD V+  +   C +C  C +     CS F  +       +   
Sbjct: 64  GSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNH 122

Query: 138 RF-KDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT 196
                 +G    HF + SSF+ Y +    + VKV    P ++             A    
Sbjct: 123 ALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFYAFDEINQAAIDSR 182

Query: 197 ANVEVGSTVVI 207
             + +   + I
Sbjct: 183 KGITLKPIIKI 193

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 82.3 bits (202), Expect = 2e-19
 Identities = 49/196 (25%), Positives = 71/196 (36%), Gaps = 26/196 (13%)

Query: 14  PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDFPAVFPR 72
           P   +AA+  A G PL I+EV V  P   +V V+I  + +CH+D+   +         P 
Sbjct: 3   PQTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPF 62

Query: 73  ILGHEAIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM 131
           I GHE +G V +VG  V  V EGD V IP     C  C  C +    LC +         
Sbjct: 63  IPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVN 122

Query: 132 PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVG 191
                                     EY + D  +V  +   V           ++  + 
Sbjct: 123 GGYA----------------------EYVLADPNYVGILPKNVKATIHPGKLDDINQILD 160

Query: 192 AAWRTANVEVGSTVVI 207
              R   +E G  V+ 
Sbjct: 161 QM-RAGQIE-GRIVLE 174

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 81.5 bits (200), Expect = 4e-19
 Identities = 37/191 (19%), Positives = 72/191 (37%), Gaps = 16/191 (8%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           +A  A +  +PL   ++    P  ++V++ I    +CHSD+   + +    V+P + GHE
Sbjct: 2   KAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHE 61

Query: 78  AIGVVESVGENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQT 136
            +G V +VG+ V+    GD V +   +  C  C  C     N C       +   P +  
Sbjct: 62  IVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPG 121

Query: 137 SRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP-NRACLLSCGVSTGVGAAWR 195
                              +S+  V+   +V+++        RA  ++      +    +
Sbjct: 122 HTLG--------------GYSQQIVVHERYVLRIRVADIEMIRADQINEAYERMLRGDVK 167

Query: 196 TANVEVGSTVV 206
              V    T+ 
Sbjct: 168 YRFVIDNRTLT 178

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 81.4 bits (200), Expect = 7e-19
 Identities = 35/200 (17%), Positives = 67/200 (33%), Gaps = 20/200 (10%)

Query: 14  PIQCRAAIATAPGEPLVIDEVIVDPP--NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFP 71
           P +       +  +     +   DP     H++ ++I    +C SD+            P
Sbjct: 4   PEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMP 63

Query: 72  RILGHEAIGVVESVG-ENVDGVVEGD-VVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            ++GHE +G V  +G ++  G+  G  V +   +  C EC  C++     C+ F    S 
Sbjct: 64  LVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQ 123

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
                               +VS   ++ Y  +    VV +   +      +   GV   
Sbjct: 124 PYE---------------DGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEA 168

Query: 190 VGAAWRTANVEVGSTVVIFG 209
                   +V    T+V + 
Sbjct: 169 F-ERMEKGDVRYRFTLVGYD 187

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 78.7 bits (193), Expect = 5e-18
 Identities = 42/202 (20%), Positives = 69/202 (34%), Gaps = 28/202 (13%)

Query: 14  PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRI 73
            ++  A +     +PLV  E  +       + V I+   +C SDV  ++ +D     P I
Sbjct: 2   GLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPII 61

Query: 74  LGHEAIGVVESVGENVDGVVEGD-----VVIPHFLADCTECVGCRS-KKGNLCSAFPFKI 127
           LGHE  G V  V      +         +++ +    C EC  C+  K+  LC       
Sbjct: 62  LGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKV-- 119

Query: 128 SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH-VVKVDPTVPPNRACLLSCGV 186
             +      S +  LRG           +S + VLD    V+KV   +       L    
Sbjct: 120 --YGINRGCSEYPHLRG----------CYSSHIVLDPETDVLKVSEKITHRLP--LKEAN 165

Query: 187 STGVGAAWRTANVEVGSTVVIF 208
                 A           V+++
Sbjct: 166 -----KALELMESREALKVILY 182

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.3 bits (189), Expect = 2e-17
 Identities = 44/201 (21%), Positives = 74/201 (36%), Gaps = 29/201 (14%)

Query: 10  TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK---DF 66
            A KP    + +   PG+ L ++   +  P  +EV +R+    +C SDV +W+     +F
Sbjct: 2   AAAKP-NNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNF 59

Query: 67  PAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK 126
               P +LGHEA G VE VG +V  +  GD V     A       C+  + NL  +  F 
Sbjct: 60  IVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFC 119

Query: 127 ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 186
            +P                         +   +   + A   K+   V P          
Sbjct: 120 ATPPDDG---------------------NLCRFYKHNAAFCYKLPDNVKPLVTHRFPLEK 158

Query: 187 STGVGAAWRTANVEVGSTVVI 207
           +     A+ T    +G  +++
Sbjct: 159 AL---EAFETFKKGLGLKIML 176

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 76.9 bits (188), Expect = 2e-17
 Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 6/173 (3%)

Query: 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVD 233
           +P   A +++  ++TG   A   A++E+GS+VV+ G+G++GL    GA+L GA RIIGV 
Sbjct: 1   MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVG 59

Query: 234 VISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACC 293
                 E  K +G T+ +N          Q++      G D      G +  + +A    
Sbjct: 60  SRPICVEAAKFYGATDILN--YKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMV 117

Query: 294 RKGWGKTIVLGVDQPGSQLSLS--SFEVLHSGKILMGSLFGGLKAKSDIPILL 344
           + G G    +     G  L +    +    + K + G L  G + +++    +
Sbjct: 118 KPG-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAERLRDM 169

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 68.8 bits (167), Expect = 2e-14
 Identities = 41/198 (20%), Positives = 70/198 (35%), Gaps = 31/198 (15%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK--------MKDFPAV 69
           RA      G+PL + E+ V  P   +V +++    +CHSDV   +        ++D    
Sbjct: 2   RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
            P  LGHE  G +E VG+ V G  +GD+V  +       C  CR  + +LC +       
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSP------ 115

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
                                    +++EY ++     +     V P     +    +  
Sbjct: 116 ----------------RWLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANE 159

Query: 190 VGAAWRTANVEVGSTVVI 207
                      +G  V+I
Sbjct: 160 AIDNLENFKA-IGRQVLI 176

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 68.9 bits (167), Expect = 2e-14
 Identities = 42/194 (21%), Positives = 74/194 (38%), Gaps = 26/194 (13%)

Query: 19  AAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK---MKDFPAVFPRILG 75
           +A+     + L +++  +  P   EV +++    +C SDV +++   + DF    P ++G
Sbjct: 4   SAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIG 62

Query: 76  HEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ 135
           HEA G V  VG+NV  + +GD V       C  C  C+  K NLC    F  +P      
Sbjct: 63  HEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDD--- 119

Query: 136 TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR 195
                              + + Y V       K+       +    S  +   V  A+ 
Sbjct: 120 ------------------GNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVD-AFE 160

Query: 196 TANVEVGSTVVIFG 209
            A  +  +T+ +  
Sbjct: 161 AARKKADNTIKVMI 174

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 64.2 bits (155), Expect = 6e-13
 Identities = 35/203 (17%), Positives = 58/203 (28%), Gaps = 33/203 (16%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE 77
           +        + L   E       S++  VR +  S C SD+              ILGHE
Sbjct: 2   KGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHE 60

Query: 78  AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTS 137
           A+G V  VG  V     GD VI          +  ++      +           +D   
Sbjct: 61  AVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGV- 119

Query: 138 RFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWR 195
                             F EY  ++ A  ++      +P +    LS  V+        
Sbjct: 120 ------------------FGEYFHVNDADMNLAI----LPKDVD--LSKLVTHVYHGFDH 155

Query: 196 TANVEVGSTVVIFGLGSIGLAVA 218
                +   +++       L  A
Sbjct: 156 -----IEEALLLMKDKPKDLIKA 173

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 63.8 bits (154), Expect = 1e-12
 Identities = 38/217 (17%), Positives = 69/217 (31%), Gaps = 26/217 (11%)

Query: 18  RAAIATAPGEPLVID------EVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFP 71
           R  +    G+  V        +        H V ++++ T++C SD    +     A   
Sbjct: 3   RGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRG-RTTAQVG 61

Query: 72  RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM 131
            +LGHE  G V   G +V+ +  GD+V   F   C  C  C+     +C       +   
Sbjct: 62  LVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGA 121

Query: 132 PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTG 189
                          +         +EY ++  A  +++K+           ++  V   
Sbjct: 122 YG------------YVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQ 169

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA 226
           V +    A    G     F  G     V +  +   A
Sbjct: 170 VISLDD-APRGYG----EFDAGVPKKFVIDPHKTFSA 201

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 63.4 bits (153), Expect = 1e-12
 Identities = 41/176 (23%), Positives = 63/176 (35%), Gaps = 3/176 (1%)

Query: 179 ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK 238
             +  C  +T   A         G TVVI G G +GL     AR  GA  +I +     +
Sbjct: 6   LAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNR 65

Query: 239 FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGW 297
            ++ +  G    +N +    +   + I+D+T G GAD+  E  G +  + E     R+G 
Sbjct: 66  LKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG- 124

Query: 298 GKTIVLGVDQPGSQLSLSSFEVLHS-GKILMGSLFGGLKAKSDIPILLKRYMDKWS 352
           G   V GV  P   +    +E L        G              +  R     S
Sbjct: 125 GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQLLS 180

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 63.3 bits (153), Expect = 2e-12
 Identities = 40/170 (23%), Positives = 60/170 (35%), Gaps = 21/170 (12%)

Query: 179 ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK 238
              LS  + TG   A   A V  GSTV + G G +GLA A  ARL GA  +I  D+   +
Sbjct: 4   LTCLSDILPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPAR 62

Query: 239 FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGL--------------- 282
               K  G      S    D  + + I  +      D   + VG                
Sbjct: 63  LAHAKAQGFEIADLSL---DTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAP 119

Query: 283 ASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332
           A+++       R   GK  + G+       ++ +   + S  I  G  + 
Sbjct: 120 ATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWA 168

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 61.2 bits (147), Expect = 6e-12
 Identities = 37/194 (19%), Positives = 66/194 (34%), Gaps = 28/194 (14%)

Query: 18  RAAIATAPGEPLVIDEV-IVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGH 76
           +AA      +PL I++V         +V VRI    +CH+D+   +      + P++   
Sbjct: 1   KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYT 60

Query: 77  EAIGVVESV---GENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR 133
                V  +    E V+G+ +GD VI H       C+ CR+ +   C    F        
Sbjct: 61  LGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDG- 119

Query: 134 DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAA 193
                                 F+E+       V+K+   V           ++  +   
Sbjct: 120 ---------------------GFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERL 158

Query: 194 WRTANVEVGSTVVI 207
            +   V +G  V+I
Sbjct: 159 EK-GEV-LGRAVLI 170

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 61.1 bits (147), Expect = 8e-12
 Identities = 46/194 (23%), Positives = 64/194 (32%), Gaps = 28/194 (14%)

Query: 18  RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDFPAVFPRILGH 76
           +AA+     EPL I EV     +  EV VRI    +CH+D+             P I GH
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61

Query: 77  EAIGVVESVGENVDGV-VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ 135
           E +G+VE VG  V  + V   V IP   + C  C  C S +  LC               
Sbjct: 62  EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKN---------- 111

Query: 136 TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR 195
                         +     ++EY      +VVK+          L        V     
Sbjct: 112 ------------AGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQPLEKINE---VFDRML 156

Query: 196 TANVEVGSTVVIFG 209
              +  G  V+   
Sbjct: 157 KGQIN-GRVVLTLE 169

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.7 bits (141), Expect = 4e-11
 Identities = 26/148 (17%), Positives = 52/148 (35%), Gaps = 8/148 (5%)

Query: 182 LSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI 241
           LS G+      A R   V +G  V++ G G IG+     A+  GA +++  D+ + +   
Sbjct: 12  LSVGI-----HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSK 66

Query: 242 GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTI 301
            K  G    +       + +++ +        +   EC G  + +Q      R G     
Sbjct: 67  AKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG---GT 123

Query: 302 VLGVDQPGSQLSLSSFEVLHSGKILMGS 329
           ++ V       ++           + G 
Sbjct: 124 LVLVGLGSEMTTVPLLHAAIREVDIKGV 151

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 53.4 bits (127), Expect = 3e-09
 Identities = 34/172 (19%), Positives = 66/172 (38%), Gaps = 11/172 (6%)

Query: 179 ACLLSCGVSTGVGAAWRTA-NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE 237
              L+    T   A  + A  +  G+ V I G+G +G    +  ++     +I +DV  E
Sbjct: 9   MAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEE 68

Query: 238 KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGW 297
           K ++ +R G    V+++      V Q++      G +   + VG  + V        +  
Sbjct: 69  KLKLAERLGADHVVDAR---RDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM- 124

Query: 298 GKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMD 349
           G+ I++G           +  V+ S     GSL G      ++  L+   + 
Sbjct: 125 GRLIIVGYGGELRF---PTIRVISSEVSFEGSLVGNYV---ELHELVTLALQ 170

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 51.5 bits (122), Expect = 2e-08
 Identities = 29/151 (19%), Positives = 52/151 (34%), Gaps = 11/151 (7%)

Query: 182 LSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI 241
           LS GV      A R A V++G+TV++ G G IGL     A+  GA  +        + E+
Sbjct: 12  LSVGV-----HACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSP-RRLEV 65

Query: 242 GKRFGVTEFVN--SKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGK 299
            K  G    +        + S+ + I        +   +C G    +       R   G 
Sbjct: 66  AKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRT-GGT 124

Query: 300 TIVLGVDQPGSQLSLSSFEVLHSGKILMGSL 330
            +++G       +++           +    
Sbjct: 125 LMLVG--MGSQMVTVPLVNACAREIDIKSVF 153

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 46.5 bits (109), Expect = 7e-07
 Identities = 30/164 (18%), Positives = 51/164 (31%), Gaps = 11/164 (6%)

Query: 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIG 231
           P         L C   T      R      G  V + G+G +G    + A       ++ 
Sbjct: 2   PQEQLAAVAPLLCAGITTYSP-LRHWQAGPGKKVGVVGIGGLGHMGIKLAH-AMGAHVVA 59

Query: 232 VDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYA 291
                 K E  K  G  E VNS+N  +               D+    V     + +   
Sbjct: 60  FTTSEAKREAAKALGADEVVNSRNADEM-------AAHLKSFDFILNTVAAPHNLDDFTT 112

Query: 292 CCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 335
             ++  G   ++G        S   F ++   + + GS+ GG+ 
Sbjct: 113 LLKRD-GTMTLVGA-PATPHKSPEVFNLIMKRRAIAGSMIGGIP 154

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.4 bits (101), Expect = 7e-06
 Identities = 31/163 (19%), Positives = 51/163 (31%), Gaps = 11/163 (6%)

Query: 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVD 233
           +P + A  L CG  T V +         G  V I GLG IG      ++         + 
Sbjct: 1   IPSHLAAPLLCGGLT-VYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISK-AMGAETYVIS 58

Query: 234 VISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS-LVQEAYAC 292
             S K E   + G   ++ +   GD        +      D    C    + +       
Sbjct: 59  RSSRKREDAMKMGADHYIATLEEGD------WGEKYFDTFDLIVVCASSLTDIDFNIMPK 112

Query: 293 CRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 335
             K  G+ + + + +    LSL           +  S  G +K
Sbjct: 113 AMKVGGRIVSISIPEQHEMLSL--KPYGLKAVSISYSALGSIK 153

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 42.1 bits (98), Expect = 1e-05
 Identities = 10/59 (16%), Positives = 20/59 (33%)

Query: 18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGH 76
          +A +    G PL + ++        EV +R+    L  +D           + P  +  
Sbjct: 2  KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPG 60

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 36.7 bits (83), Expect = 0.002
 Identities = 20/206 (9%), Positives = 41/206 (19%), Gaps = 44/206 (21%)

Query: 15  IQCRAAIATAPGEP-----LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
           I  +A + T  GEP         E+  D    +EV V+ + + +  SD+   +       
Sbjct: 2   ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKP 61

Query: 70  FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
                                    G         +       +             + P
Sbjct: 62  AKTTGF-------------------GTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIP 102

Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
                                           L         P    ++A     G++  
Sbjct: 103 SHVNFG--------------------TWRTHALGNDDDFIKLPNPAQSKANGKPNGLTDA 142

Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGL 215
                     +    +   G+ +   
Sbjct: 143 KSIETLYDGTKPLHELYQDGVANSKD 168

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	362
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	100.0
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	100.0
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	100.0
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	100.0
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	100.0
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	100.0
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	100.0
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	100.0
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	100.0
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	100.0
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	100.0
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	100.0
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	100.0
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	100.0
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.98
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.97
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.97
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.97
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.96
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.95
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.95
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.95
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.95
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.95
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.95
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.95
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.95
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.95
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.95
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.94
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.94
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.94
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.94
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.94
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.94
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.94
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.93
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.93
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.93
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.93
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.92
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.92
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.92
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.92
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.92
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.91
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.91
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.9
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.9
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.89
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.85
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.85
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.65
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.62
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.34
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.98
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.87
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.85
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.79
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.69
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.68
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.55
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.54
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.53
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.51
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.5
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.48
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.48
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.48
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.47
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	97.45
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.43
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.42
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.4
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.38
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.34
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.34
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.33
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.33
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.33
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.32
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.31
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.3
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.29
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.29
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.28
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.25
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.24
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.19
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	97.18
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	97.12
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.12
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.11
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	97.11
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	97.1
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	97.09
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	97.08
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.06
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.06
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	97.04
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.04
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.04
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.03
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.03
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	97.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	97.0
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.96
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	96.96
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.94
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	96.93
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.93
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	96.93
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	96.92
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.88
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.86
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.86
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.85
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	96.82
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.81
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	96.76
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.68
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	96.64
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.63
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	96.63
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.61
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.61
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	96.58
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.57
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.55
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.55
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	96.53
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.53
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.52
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.51
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	96.5
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.46
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	96.46
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	96.45
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.43
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.43
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	96.42
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	96.38
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.31
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.23
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.22
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.18
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.15
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.15
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.15
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	95.92
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.9
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	95.89
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	95.85
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	95.84
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	95.83
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	95.8
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	95.71
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	95.69
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	95.66
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	95.51
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	95.44
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.36
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.35
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.34
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	95.34
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	95.28
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	95.25
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	95.25
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	95.18
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	95.17
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	95.09
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	95.09
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	94.98
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	94.96
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	94.95
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.83
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	94.78
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.7
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	94.68
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.58
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	94.53
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	94.5
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.48
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	94.46
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	94.41
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.23
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	94.16
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.15
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	94.09
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.09
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.07
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	93.88
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	93.79
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.75
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.73
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	93.71
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	93.63
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	93.63
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	93.62
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	93.49
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.45
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	93.44
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	93.25
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.21
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	93.2
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	93.17
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	93.09
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.05
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	93.03
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	93.02
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	93.02
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	92.94
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	92.94
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	92.86
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	92.84
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	92.83
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	92.82
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	92.81
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	92.8
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	92.79
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	92.64
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	92.62
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	92.62
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	92.54
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	92.53
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	92.48
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	92.45
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	92.45
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	92.41
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	92.4
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	92.39
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	92.37
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	92.29
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	92.26
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.23
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	92.09
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	92.06
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	91.95
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	91.93
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	91.9
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	91.88
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	91.83
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	91.8
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	91.77
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	91.73
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	91.69
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	91.6
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	91.58
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	91.53
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	91.51
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	91.46
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	91.44
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	91.41
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	91.4
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	91.39
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	91.31
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	91.28
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.27
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	91.25
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	91.15
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	91.06
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	91.04
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	91.01
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	90.92
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	90.89
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	90.85
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	90.82
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	90.76
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	90.71
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	90.54
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	90.37
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	90.34
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	90.31
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	90.27
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	90.25
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	90.15
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	90.14
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	90.02
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	90.01
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	89.98
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	89.92
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	89.9
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	89.89
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	89.87
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	89.71
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	89.64
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	89.61
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	89.57
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	89.53
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	89.53
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	89.37
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.35
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	89.34
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	89.22
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	89.18
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	89.14
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	89.09
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	88.93
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	88.89
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	88.8
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	88.76
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	88.73
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	88.27
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	88.14
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	88.14
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	88.13
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	88.12
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.09
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	88.05
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	87.8
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	87.8
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	87.72
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	87.72
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	87.71
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	87.67
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	87.47
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	87.46
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	87.41
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	87.37
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	87.12
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.02
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	86.89
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	86.61
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	86.57
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	86.42
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	86.41
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	86.23
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	86.19
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	86.14
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	86.04
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	86.01
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	85.84
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	85.82
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	85.8
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	85.66
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	85.57
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	85.56
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	85.52
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	85.46
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	85.1
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.98
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	84.59
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	84.28
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	84.07
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	84.06
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	83.89
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	83.77
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	83.74
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	83.73
d1qmga2	226	Class II ketol-acid reductoisomerase (KARI) {Spina	83.69
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	83.53
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	83.41
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	83.19
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	83.04
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	82.92
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	82.88
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	82.82
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	82.66
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	82.49
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	82.46
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	82.35
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	82.2
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	82.2
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	82.07
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	82.07
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	81.91
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	81.89
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	81.44
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	81.31
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	80.81
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	80.68
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	80.5
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	80.49
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	80.15
d1o58a_	293	O-acetylserine sulfhydrylase (Cysteine synthase) {	80.08

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=8.2e-38  Score=272.56  Aligned_cols=198  Identities=35%  Similarity=0.561  Sum_probs=177.8

Q ss_pred             CCCCcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCC
Q 018022           10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV   89 (362)
Q Consensus        10 ~~~~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v   89 (362)
                      +-+++|++||+++++++.+|+++|++.|+|+++||||||.++|||++|++.+.+......+|.++|||++|+|+++|+++
T Consensus         2 ~~~~~~~~kAav~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~~~p~i~GhE~~G~v~~vG~~v   81 (199)
T d1cdoa1           2 TVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGV   81 (199)
T ss_dssp             CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTTSCSEECCCCEEEEEEEECTTC
T ss_pred             CCCCceEEEEEEEecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhcccccccccccccccceEEEEEcCCC
Confidence            34688999999999999889999999999999999999999999999999999988778899999999999999999999


Q ss_pred             CCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEE
Q 018022           90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (362)
Q Consensus        90 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~  169 (362)
                      ++|++||||++.+..+|++|..|+.+++++|.+.......+...+|...+ ...|..+.+.++.|+|+||+++++.++++
T Consensus        82 ~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~Ggfaey~~v~~~~~~~  160 (199)
T d1cdoa1          82 TEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRF-TCKGRKVLQFLGTSTFSQYTVVNQIAVAK  160 (199)
T ss_dssp             CSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCE-EETTEEEEEGGGTCCSBSEEEEEGGGEEE
T ss_pred             ceecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccce-eeccceeecccccCCceEEEEEchHHEEE
Confidence            99999999999999999999999999999999987765555555553332 23555566666678999999999999999


Q ss_pred             cCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEE
Q 018022          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF  208 (362)
Q Consensus       170 ~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~  208 (362)
                      ||++++++++|++.+++.|++.++......+.|++|||+
T Consensus       161 iP~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         161 IDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             CCTTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            999999999999999999999998888888999999984

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=100.00  E-value=2.6e-36  Score=262.29  Aligned_cols=196  Identities=38%  Similarity=0.595  Sum_probs=169.2

Q ss_pred             CCcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCC
Q 018022           12 GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG   91 (362)
Q Consensus        12 ~~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~   91 (362)
                      +.+|+|||+++++++++|+++++|.|+|+++||||||+++|||++|++++.|.+....+|.++|||++|+|+++|++|+.
T Consensus         2 ~~~~~~kAav~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~~~p~v~GhE~~G~V~~vG~~V~~   81 (197)
T d2fzwa1           2 NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTK   81 (197)
T ss_dssp             CCCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             CCceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcccccccccCCcceeeEEEeecCCcee
Confidence            46789999999999999999999999999999999999999999999999998877889999999999999999999999


Q ss_pred             CCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 018022           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (362)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P  171 (362)
                      +++||||++.+..+|+.|..|..++++.|++.......+...+...++ ...|+.+.++.+.|+|+||+++++.+++++|
T Consensus        82 ~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~-~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp  160 (197)
T d2fzwa1          82 LKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRF-TCKGKTILHYMGTSTFSEYTVVADISVAKID  160 (197)
T ss_dssp             CCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSE-EETTEEEBCCTTTCCSBSEEEEEGGGEEECC
T ss_pred             cCCCCEEEEccccccccccccccCccccCccccccccccccCCcccee-ccCCcceecccccccceeEEEechHHEEECC
Confidence            999999999999999999999999999999865543333333332221 1345555556667899999999999999999


Q ss_pred             CCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEE
Q 018022          172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF  208 (362)
Q Consensus       172 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~  208 (362)
                      +++++++++.+.+++.+++.++.....-+.+++|||+
T Consensus       161 ~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         161 PLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             TTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            9999999999999999999986555555788888874

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=100.00  E-value=3.3e-36  Score=260.95  Aligned_cols=192  Identities=24%  Similarity=0.419  Sum_probs=160.2

Q ss_pred             cceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCC
Q 018022           14 PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVV   93 (362)
Q Consensus        14 ~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~   93 (362)
                      +++|+|+++.+.+++|++++++.|+|+++||||||.+++||++|++++.|.++ .++|+++|||++|+|+++|+++++|+
T Consensus         1 ~k~~~Aav~~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~i~GHE~~G~V~~vG~~v~~~~   79 (194)
T d1f8fa1           1 LKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTELQ   79 (194)
T ss_dssp             CEEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             CceeEEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhccc-ccCCcccccceEEEeeecCccceeEc
Confidence            46799999999998899999999999999999999999999999999998765 46899999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcc-ccccCCceecccccccceeeeEEeecCceEEcCC
Q 018022           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSR-FKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP  172 (362)
Q Consensus        94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~-~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~  172 (362)
                      +||||+. +..+|+.|.+|+++++++|++.......|...+|..+ +....+....+.++.|+|+||.+++..+++++|+
T Consensus        80 vGDrVv~-~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip~  158 (194)
T d1f8fa1          80 VGDHVVL-SYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTK  158 (194)
T ss_dssp             TTCEEEE-CCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECT
T ss_pred             cCceeee-ecccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEECCC
Confidence            9999955 4558999999999999999986444345555555444 2333444455666778999999999999999999


Q ss_pred             CCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEE
Q 018022          173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV  232 (362)
Q Consensus       173 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~  232 (362)
                      +++++++                         +++.|+|++|++++|+++.+|..+|+++
T Consensus       159 ~i~~~~~-------------------------~~i~g~g~~g~~aiq~a~~~g~~~iiaV  193 (194)
T d1f8fa1         159 DFPFDQL-------------------------VKFYAFDEINQAAIDSRKGITLKPIIKI  193 (194)
T ss_dssp             TCCGGGG-------------------------EEEEEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred             CCCcccE-------------------------EEEeCcHHHHHHHHHHHHHcCCCEEEEe
Confidence            9876544                         3456779999999999999999777775

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=100.00  E-value=1.3e-35  Score=259.35  Aligned_cols=194  Identities=38%  Similarity=0.581  Sum_probs=164.3

Q ss_pred             CCCCcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCC
Q 018022           10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV   89 (362)
Q Consensus        10 ~~~~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v   89 (362)
                      +..++|+|||+++++++++|+++++|.|+|+++||||||.++|||++|++++.|.++ ..+|+++|||++|+|+++|++|
T Consensus         2 ~~~~~~~~KAaV~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~v~GHE~~G~V~~vG~~V   80 (202)
T d1e3ia1           2 TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKK-ALFPVVLGHECAGIVESVGPGV   80 (202)
T ss_dssp             CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSC-CCSSBCCCCEEEEEEEEECTTC
T ss_pred             CCCCeEEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeecc-cccccccccccceEEeeecCCc
Confidence            346889999999999998899999999999999999999999999999999998765 5679999999999999999999


Q ss_pred             CCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCC---CCCC-CCCCccccccCCceecccccccceeeeEEeecC
Q 018022           90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKIS---PWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA  165 (362)
Q Consensus        90 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~---~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~  165 (362)
                      ++|++||||++.+...|+.|..|+.++.++|.+......   .+.. .++..+ ....|+.+.+.++.|+|+||+++++.
T Consensus        81 ~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~v~~~~~~G~faey~~v~~~  159 (202)
T d1e3ia1          81 TNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSR-FTCKGRSIYHFMGVSSFSQYTVVSEA  159 (202)
T ss_dssp             CSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCS-EEETTEEEBCCTTTCCSBSEEEEEGG
T ss_pred             eeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccc-cccCceeeecccccCCceEEEEEehh
Confidence            999999999999999999999999999999998775311   1111 122222 23456666667777899999999999


Q ss_pred             ceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEE
Q 018022          166 HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF  208 (362)
Q Consensus       166 ~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~  208 (362)
                      +++++|++++++.++.+.+++.+.+.++ .  .+++|++|.|+
T Consensus       160 ~l~~lP~~~~~~~~~~~~~~~~~~~~a~-~--~~k~G~~V~vi  199 (202)
T d1e3ia1         160 NLARVDDEFDLDLLVTHALPFESINDAI-D--LMKEGKSIRTI  199 (202)
T ss_dssp             GEEECCTTSCGGGGEEEEEEGGGHHHHH-H--HHHTTCCSEEE
T ss_pred             hEEECCCCCCHHHHHHHHHHHHHHHHHH-H--hCCCCCEEEEE
Confidence            9999999999998888888888888765 2  24689988876

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=100.00  E-value=6.6e-36  Score=256.07  Aligned_cols=171  Identities=24%  Similarity=0.370  Sum_probs=153.0

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC---CCCCccccccceEEEEEeCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVDGVV   93 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~---~~~p~~~G~e~~G~Vv~vG~~v~~~~   93 (362)
                      |.|++++++++ |+++++|.|+|+++||||||++++||++|++++.+....   .+.|+++|||++|+|+++|+++++|+
T Consensus         2 ~maAVl~g~~~-l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~   80 (178)
T d1e3ja1           2 NLSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLK   80 (178)
T ss_dssp             CEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCC
T ss_pred             ceEEEEEcCCc-EEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCC
Confidence            34556778887 999999999999999999999999999999999875432   46789999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      +||||++.+..+|+.|..|..++.++|.+..+.  .+...+|                   +|+||+++|+++++++|++
T Consensus        81 ~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~--~~~~~~G-------------------~~aey~~v~~~~~~~iP~~  139 (178)
T d1e3ja1          81 KGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC--ATPPDDG-------------------NLARYYVHAADFCHKLPDN  139 (178)
T ss_dssp             TTCEEEECCEECCSSSHHHHTTCGGGCTTCEET--TBTTBCC-------------------SCBSEEEEEGGGEEECCTT
T ss_pred             CCCEEEECcccccCCccccccCCccccccccce--ecccccc-------------------ccceeeeecccceeeCCCC
Confidence            999999999999999999999999999887763  2223345                   9999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL  210 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga  210 (362)
                      +++++++++.+.+.|||+++ +.+++++|++|+|+|+
T Consensus       140 ~~~~~aa~~~~~~~ta~~a~-~~~~~~~g~~VlVig~  175 (178)
T d1e3ja1         140 CNVKQLVTHSFKLEQTVDAF-EAARKKADNTIKVMIS  175 (178)
T ss_dssp             CCCGGGEEEEEEGGGHHHHH-HHHHHCCTTCSEEEEE
T ss_pred             CCHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEEcc
Confidence            99999999999999999985 7889999999999975

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=100.00  E-value=3.5e-35  Score=255.29  Aligned_cols=195  Identities=37%  Similarity=0.641  Sum_probs=162.9

Q ss_pred             CCCCcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCC
Q 018022           10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV   89 (362)
Q Consensus        10 ~~~~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v   89 (362)
                      +..+.++|||+++++++++|++++++.|+|+++||||||.++|||++|++++.|..+ ..+|.++|||++|+|+++|+++
T Consensus         2 ~~~~~~~~KAav~~~~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~-~~~P~i~GHE~~G~Vv~~G~~v   80 (198)
T d1p0fa1           2 TAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVESIGAGV   80 (198)
T ss_dssp             CTTSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEEEEEEECTTC
T ss_pred             CCCCceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeeeeccc-cccccccceeeeeeeeecCccc
Confidence            345788999999999998899999999999999999999999999999999998765 4789999999999999999999


Q ss_pred             CCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEE
Q 018022           90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (362)
Q Consensus        90 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~  169 (362)
                      .++++||||++.+..+|+.|.+|+.+++++|++.......|...++..++. +.++.+......|+|+||+.+++..+++
T Consensus        81 ~~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~g~faey~~v~~~~~~k  159 (198)
T d1p0fa1          81 TCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFT-CRGKPIYNLMGTSTFTEYTVVADIAVAK  159 (198)
T ss_dssp             CSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEE-ETTEEEBCSTTTCCSBSEEEEETTSEEE
T ss_pred             ccCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEe-eCCeeccccCCCccceeeEEecHHHEEE
Confidence            999999999999999999999999999999998887655555555544443 3344455555568999999999999999


Q ss_pred             cCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHH
Q 018022          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA  216 (362)
Q Consensus       170 ~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~  216 (362)
                      +|++++.+.++...+.+.+          +.++++|||.|+|++|++
T Consensus       160 ip~~~~~~~~~~~~~~~~~----------v~~~~~vlv~G~G~iGl~  196 (198)
T d1p0fa1         160 IDPKINVNFLVSTKLTLDQ----------INKAFELLSSGQGVRSIM  196 (198)
T ss_dssp             ECTTSCGGGGEEEEECGGG----------HHHHHHHTTTSSCSEEEE
T ss_pred             CCCCCCHHHHHHhhcchhh----------cCCCCEEEEECCCcceEE
Confidence            9999998776655444332          223445788888887753

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=8.3e-35  Score=248.51  Aligned_cols=172  Identities=27%  Similarity=0.336  Sum_probs=154.9

Q ss_pred             CcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCC
Q 018022           13 KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDG   91 (362)
Q Consensus        13 ~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~   91 (362)
                      +|.+|||+++.+++++|+++++|.|+|+++||||||.+++||++|++.+.|.++. ..+|.++|||++|+|+++|+++++
T Consensus         2 ~P~tMkA~v~~~~g~pl~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~~~G~~v~~   81 (175)
T d1llua1           2 LPQTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTR   81 (175)
T ss_dssp             CCSEEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCS
T ss_pred             cchhcEEEEEEeCCCCCEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEEEeCCCccc
Confidence            6789999999999988999999999999999999999999999999999998764 578999999999999999999999


Q ss_pred             CCCCCEEEeeC-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEc
Q 018022           92 VVEGDVVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV  170 (362)
Q Consensus        92 ~~~Gd~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~  170 (362)
                      |++||||++.+ ...|+.|..|..++.+.|.+...   .|...+|                   +|+||+.+++++++++
T Consensus        82 ~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~---~G~~~~g-------------------g~aey~~v~~~~~~~i  139 (175)
T d1llua1          82 VKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQN---TGYSVNG-------------------GYAEYVLADPNYVGIL  139 (175)
T ss_dssp             CCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEECTTTSEEC
T ss_pred             cccCCEEEeccccccCCccccccCCcccccccccc---ccccccc-------------------ccceEEEechHHEEEC
Confidence            99999998875 45699999999999999998876   6767777                   9999999999999999


Q ss_pred             CCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEE
Q 018022          171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF  208 (362)
Q Consensus       171 P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~  208 (362)
                      |++++++.++++.+++.|+++.+ +. +..+|++|||+
T Consensus       140 Pd~l~~~~a~~~~~~~~t~~~~~-~~-g~~~G~~VLVl  175 (175)
T d1llua1         140 PKNVKATIHPGKLDDINQILDQM-RA-GQIEGRIVLEM  175 (175)
T ss_dssp             CTTCCCCEEEECGGGHHHHHHHH-HT-TCCSSEEEEEC
T ss_pred             CCCCChhHHHHHHhHHHHHHHHH-Hh-CCCCCCEEEeC
Confidence            99999988888777888888764 43 34479999984

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=100.00  E-value=6.7e-35  Score=247.96  Aligned_cols=166  Identities=27%  Similarity=0.418  Sum_probs=153.3

Q ss_pred             eEEEeccCCCceEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhhcCCCC---CCCCccccccceEEEEEeCCCCCCCC
Q 018022           18 RAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVDGVV   93 (362)
Q Consensus        18 ka~~~~~~~~~l~l~~~~~p~~-~~~eVlVkv~~~~i~~~d~~~~~g~~~~---~~~p~~~G~e~~G~Vv~vG~~v~~~~   93 (362)
                      ||+++.+++++|++++++.|++ +++||||||.+++||++|++.+.|..+.   ..+|.++|||++|+|+++|+++++|+
T Consensus         1 kA~~~~~~g~pl~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~   80 (171)
T d1h2ba1           1 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE   80 (171)
T ss_dssp             CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCC
T ss_pred             CEEEEEeCCCCCEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCC
Confidence            7999999999999999999986 6899999999999999999999887643   57899999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      +||||++.+..+|++|..|+.++.++|.+..+   .|...+|                   +|+||+.++.++++++|++
T Consensus        81 ~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~iP~~  138 (171)
T d1h2ba1          81 KGDPVILHPAVTDGTCLACRAGEDMHCENLEF---PGLNIDG-------------------GFAEFMRTSHRSVIKLPKD  138 (171)
T ss_dssp             TTCEEEECSCBCCSCSHHHHTTCGGGCTTCBC---BTTTBCC-------------------SSBSEEEECGGGEEECCTT
T ss_pred             CCCEEEEcCccCCCCccccccccccccccccc---ceeeccc-------------------ccceeeeehhhcceecCCC
Confidence            99999999999999999999999999998877   5777777                   9999999999999999999


Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEE
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVI  207 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI  207 (362)
                      ++++.++++.+++.|+|+++ +..++ .|++|||
T Consensus       139 ~~~e~aa~~~~~~~ta~~al-~~~~~-~G~~VlI  170 (171)
T d1h2ba1         139 VRVEVDIHKLDEINDVLERL-EKGEV-LGRAVLI  170 (171)
T ss_dssp             CCCCEEEEEGGGHHHHHHHH-HTTCC-SSEEEEE
T ss_pred             CCHHHHHHHHhHHHHHHHHH-HhcCC-CCCEEEe
Confidence            99988888888999999986 66777 8999998

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=100.00  E-value=7.2e-34  Score=247.34  Aligned_cols=194  Identities=36%  Similarity=0.580  Sum_probs=162.9

Q ss_pred             CCCCcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCC
Q 018022           10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV   89 (362)
Q Consensus        10 ~~~~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v   89 (362)
                      +-.+.++|||+++++++++|++++++.|+|+++||||||.++|||++|++.+.|.++ .++|.++|||++|+|+++|+++
T Consensus         2 ~~~~~~k~KAavl~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~-~~~P~i~GHE~~G~Vv~vG~~v   80 (198)
T d2jhfa1           2 TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV-TPLPVIAGHEAAGIVESIGEGV   80 (198)
T ss_dssp             CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSC-CCSSBCCCCSEEEEEEEECTTC
T ss_pred             CCCCceEEEEEEEecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCcc-cccceecccceeEEEEecCccc
Confidence            346789999999999998899999999999999999999999999999999999765 4689999999999999999999


Q ss_pred             CCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEE
Q 018022           90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK  169 (362)
Q Consensus        90 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~  169 (362)
                      +++++||||++.+..+|+.|..|+.++.+.|.+.......+...++... -...|+.+.+.++.|+|+||+++|+.++++
T Consensus        81 ~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~  159 (198)
T d2jhfa1          81 TTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSR-FTCRGKPIHHFLGTSTFSQYTVVDEISVAK  159 (198)
T ss_dssp             CSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCS-EEETTEEEBCSTTTCCSBSEEEEEGGGEEE
T ss_pred             cCcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCcccc-ccccCceeccCCCCCcccCeEEeCHHHeEE
Confidence            9999999999999999999999999999999998876555544444222 234566677777889999999999999999


Q ss_pred             cCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEE
Q 018022          170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF  208 (362)
Q Consensus       170 ~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~  208 (362)
                      +|++++++.++...+++.....   ....+++|++|+|+
T Consensus       160 ~p~~~~~e~l~~~~~~~~~v~~---g~~~l~~G~~VaVi  195 (198)
T d2jhfa1         160 IDAAFALDPLITHVLPFEKINE---GFDLLRSGESIRTI  195 (198)
T ss_dssp             CCTTSCCGGGEEEEEEGGGHHH---HHHHHHTTCCSEEE
T ss_pred             CCCCCCHHHHHHHHHHHHhhhh---CCceeeCCCEEEEE
Confidence            9999988766655444443322   22346789998886

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.9e-34  Score=245.24  Aligned_cols=176  Identities=24%  Similarity=0.355  Sum_probs=148.6

Q ss_pred             CcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCC--
Q 018022           13 KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVD--   90 (362)
Q Consensus        13 ~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~--   90 (362)
                      |+++|||+++++++++|++++++.|+|+++||||||.++|||++|+++++|..+..++|+++|||++|+|+++|++|+  
T Consensus         1 m~~k~kA~v~~~~~~pl~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~~~P~vlGHE~~G~V~~vG~~v~~~   80 (184)
T d1vj0a1           1 MGLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDL   80 (184)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEESSCCBCT
T ss_pred             CCceEEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCccccccccceeeeeeeeEEecccccc
Confidence            578899999999998899999999999999999999999999999999999887778999999999999999999986  


Q ss_pred             ---CCCCCCEEEeeCCCCCCCCccccCCCC-CCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEee-cC
Q 018022           91 ---GVVEGDVVIPHFLADCTECVGCRSKKG-NLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLD-IA  165 (362)
Q Consensus        91 ---~~~~Gd~V~~~~~~~~~~c~~c~~~~~-~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~-~~  165 (362)
                         ++++||+|++.+..+|+.|.+|+.++. ++|++...   +|+... .+.+++.          .|+|+||+.++ ..
T Consensus        81 ~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~---~G~~~~-~~~~~~~----------~Gg~ae~~~v~~~~  146 (184)
T d1vj0a1          81 NGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKV---YGINRG-CSEYPHL----------RGCYSSHIVLDPET  146 (184)
T ss_dssp             TSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEE---TTTTCC-SSSTTCC----------CSSSBSEEEECTTC
T ss_pred             ccccccceeeeEeccccccccChhHhCccccccCCCcee---eccCCC-CCCCCCc----------ceeCcCcEEechhH
Confidence               468999999999999999999999986 46888775   343211 0111111          24999999996 57


Q ss_pred             ceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEEC
Q 018022          166 HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFG  209 (362)
Q Consensus       166 ~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G  209 (362)
                      +++++|++++.++      ++++|++++ +.+++++|++|||+.
T Consensus       147 ~v~~ip~~l~~~~------pl~~A~~a~-~~~~~~~G~~VlI~~  183 (184)
T d1vj0a1         147 DVLKVSEKITHRL------PLKEANKAL-ELMESREALKVILYP  183 (184)
T ss_dssp             CEEEECTTCCEEE------EGGGHHHHH-HHHHHTSCSCEEEEC
T ss_pred             cEEECCCCCCHHH------HHHHHHHHH-HHhCCCcCCEEEEee
Confidence            8999999998653      345677764 778999999999973

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=100.00  E-value=9e-36  Score=254.19  Aligned_cols=171  Identities=19%  Similarity=0.117  Sum_probs=145.9

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd   96 (362)
                      |||+++.++++ ++++++|.|+|+++|||||++++|||++|++.+.+.....++|+++|||++|+|+++|+++++|++||
T Consensus         1 MKa~v~~~~~~-l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~~~~P~i~GhE~~G~V~~vG~~v~~~~vGd   79 (177)
T d1jqba1           1 MKGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGD   79 (177)
T ss_dssp             CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTCCCSSEECCCCEEEEEEEECTTCCSCCTTC
T ss_pred             CeEEEEEeCCC-eEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCCCCCCccCcceeeEEeeecccccceecCCC
Confidence            89999999998 99999999999999999999999999999988877766678899999999999999999999999999


Q ss_pred             EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec--CceEEcCCCC
Q 018022           97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI--AHVVKVDPTV  174 (362)
Q Consensus        97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~--~~~~~~P~~l  174 (362)
                      ||++.+..+|++|..|+.++.+.|.+....+.+|...+|                   +|+||+++|.  .+++++|+++
T Consensus        80 rV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G-------------------~~aEy~~vp~a~~~l~~iP~~~  140 (177)
T d1jqba1          80 RVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDG-------------------VFGEYFHVNDADMNLAILPKDV  140 (177)
T ss_dssp             EEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCC-------------------SSBSSEEESSHHHHCEECCTTS
T ss_pred             cEEEeeeeccccccchhhhhhcccccccccccccCCCCh-------------------hcCeeEEEEhhhCeEEECCCCc
Confidence            999999999999999999999999987765445555566                   9999999986  4799999999


Q ss_pred             CccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHH
Q 018022          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVA  218 (362)
Q Consensus       175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~  218 (362)
                      ++++++...   .+++..+        ++.++|+|+|++|+.++
T Consensus       141 ~~~~~~~~~---~~~~~~~--------~~~vlv~g~gp~gl~aa  173 (177)
T d1jqba1         141 DLSKLVTHV---YHGFDHI--------EEALLLMKDKPKDLIKA  173 (177)
T ss_dssp             CGGGGEEEE---EESGGGH--------HHHHHHHHHCCTTCSEE
T ss_pred             chHHHHHHH---HHHHHHh--------cCceEEECCCHHHhhee
Confidence            988776543   2333322        23367778887776543

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-34  Score=245.32  Aligned_cols=171  Identities=24%  Similarity=0.369  Sum_probs=150.1

Q ss_pred             ceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCC---CCCCCccccccceEEEEEeCCCCCC
Q 018022           15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENVDG   91 (362)
Q Consensus        15 ~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~---~~~~p~~~G~e~~G~Vv~vG~~v~~   91 (362)
                      ..++|++++++++ |++++++.|+|+++||||||.+++||++|++.+.+...   ..++|+++|||++|+|+++|+++++
T Consensus         6 p~~~a~V~~gp~~-l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~   84 (185)
T d1pl8a1           6 PNNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKH   84 (185)
T ss_dssp             CCCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCS
T ss_pred             CCCEEEEEeCCCe-EEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceee
Confidence            3688999999987 99999999999999999999999999999999986542   2567999999999999999999999


Q ss_pred             CCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeecCceEEc
Q 018022           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV  170 (362)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~  170 (362)
                      |++||||++.+..+|+.|.+|+.++++.|.+..+   .|.. .+|                   +|+||++++.++++++
T Consensus        85 ~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~---~g~~~~~G-------------------~~aey~~~~~~~~~~l  142 (185)
T d1pl8a1          85 LKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFF---CATPPDDG-------------------NLCRFYKHNAAFCYKL  142 (185)
T ss_dssp             CCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEE---TTBTTBCC-------------------SCBSEEEEEGGGEEEC
T ss_pred             ecccccceecceeccccchhhccchhchhcccee---eecccccc-------------------cceEEEEEchHHEEEC
Confidence            9999999999999999999999999999988776   3332 344                   8999999999999999


Q ss_pred             CCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCCh
Q 018022          171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGS  212 (362)
Q Consensus       171 P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~  212 (362)
                      |++++++++++++  +.+|+++ ++.+++++|++||| |+|+
T Consensus       143 P~~~~~~~aa~~p--l~~a~~a-~~~~~~~~G~~VlI-g~GP  180 (185)
T d1pl8a1         143 PDNVKPLVTHRFP--LEKALEA-FETFKKGLGLKIML-KCDP  180 (185)
T ss_dssp             CTTCGGGEEEEEE--GGGHHHH-HHHHHTTCCSEEEE-ECCT
T ss_pred             CCCCCHHHHHHHH--HHHHHHH-HHHhCCCCCCEEEE-EeCC
Confidence            9999999987654  4567776 46788999999998 5554

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.7e-33  Score=241.79  Aligned_cols=177  Identities=18%  Similarity=0.253  Sum_probs=152.3

Q ss_pred             CCcceeeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCC
Q 018022           12 GKPIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV   89 (362)
Q Consensus        12 ~~~~~~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v   89 (362)
                      +.|.+|||+++..+++.  +++.+++.++++++||||||.++|||++|++++.|..+..++|+++|||++|+|+++|+++
T Consensus         2 ~~P~~~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~~~~P~i~GHE~~G~Vv~vG~~v   81 (192)
T d1piwa1           2 SYPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKS   81 (192)
T ss_dssp             CTTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTC
T ss_pred             CCCceeEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCCCCCCcCcccccccchhhccccc
Confidence            35778999999988764  7777887677899999999999999999999999988778899999999999999999987


Q ss_pred             -CCCCCCCEEEeeCC-CCCCCCccccCCCCCCCCCCCCCCC----CCCCCCCCccccccCCceecccccccceeeeEEee
Q 018022           90 -DGVVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKIS----PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLD  163 (362)
Q Consensus        90 -~~~~~Gd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~----~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~  163 (362)
                       +.+++||||.+.+. .+|+.|..|+.++++.|.+......    .|...+                   |+|+||++++
T Consensus        82 ~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~-------------------Ggfaey~~v~  142 (192)
T d1piwa1          82 NSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQ-------------------GGYANYVRVH  142 (192)
T ss_dssp             CSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCC-------------------CSSBSEEEEE
T ss_pred             ccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccc-------------------cceeeEEEee
Confidence             56999999987774 4799999999999999998765311    233333                   4999999999


Q ss_pred             cCceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEE
Q 018022          164 IAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF  208 (362)
Q Consensus       164 ~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~  208 (362)
                      +.+++++|+++++++|+++.+.+.|||+++ +..++++|++|||.
T Consensus       143 ~~~~~~iP~~l~~e~Aal~~~~~~ta~~~l-~~~~vk~g~~Vvv~  186 (192)
T d1piwa1         143 EHFVVPIPENIWVETLPVGEAGVHEAFERM-EKGDVRYRFTLVGY  186 (192)
T ss_dssp             GGGEEECCTTCCEEEEESSHHHHHHHHHHH-HHTCCSSEEEEECC
T ss_pred             hHHeEECCCCCCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEE
Confidence            999999999999998887765678999976 67899999999985

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=100.00  E-value=6e-33  Score=237.28  Aligned_cols=167  Identities=25%  Similarity=0.398  Sum_probs=144.9

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCC--------CCCCCccccccceEEEEEeCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF--------PAVFPRILGHEAIGVVESVGEN   88 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~--------~~~~p~~~G~e~~G~Vv~vG~~   88 (362)
                      |||++++++|++|++++++.|+|+++||||||.++|||++|+++++|.++        ..++|+++|||++|+|+++|+.
T Consensus         1 MKA~~~~~~G~pl~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~   80 (177)
T d1jvba1           1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (177)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEEeCCCCCEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeeccC
Confidence            89999999998899999999999999999999999999999999988643        2468999999999999999999


Q ss_pred             CCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCc-e
Q 018022           89 VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH-V  167 (362)
Q Consensus        89 v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~-~  167 (362)
                      +++|++||||++.+..+|+.|..|+.++++.|++..+   +|...+|                   +|+||++++..+ +
T Consensus        81 v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~vp~~~~~  138 (177)
T d1jvba1          81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRW---LGINFDG-------------------AYAEYVIVPHYKYM  138 (177)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEE---BTTTBCC-------------------SSBSEEEESCGGGE
T ss_pred             ccccccCceEeeeeccccccccccccccccccCCcce---eeecccc-------------------ccccEEEEEhHHeE
Confidence            9999999999999999999999999999999998876   5767777                   999999998655 5


Q ss_pred             EEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEE
Q 018022          168 VKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVI  207 (362)
Q Consensus       168 ~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI  207 (362)
                      +++|+..+.+.++.+..++.++++++ +..++ .|++|||
T Consensus       139 ~~~~~~~~~~~a~~~~~~~~~a~~~~-~~~~~-~G~~VlI  176 (177)
T d1jvba1         139 YKLRRVKPMITKTMKLEEANEAIDNL-ENFKA-IGRQVLI  176 (177)
T ss_dssp             EECSSSCCCCEEEEEGGGHHHHHHHH-HTTCC-CSEEEEE
T ss_pred             EECCCCChHHHHHHHHHHHHHHHHHH-Hhhcc-cCCceEC
Confidence            56666555555555455788888875 66665 5899987

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.98  E-value=1.7e-32  Score=233.21  Aligned_cols=168  Identities=27%  Similarity=0.337  Sum_probs=146.2

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCC-CCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-PAVFPRILGHEAIGVVESVGENVDGVVEG   95 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~-~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G   95 (362)
                      |||+++++++++|++++++.|+|+++||||||+++|||++|++.+.+... ...+|.++|||++|+|+++|+.++++++|
T Consensus         1 MkA~v~~~~g~pl~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~vG~~v~~~~vG   80 (171)
T d1rjwa1           1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVG   80 (171)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEecCCCCcEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEecccccCceee
Confidence            89999999998899999999999999999999999999999998886643 36789999999999999999999999999


Q ss_pred             CEEEeeCC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022           96 DVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV  174 (362)
Q Consensus        96 d~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l  174 (362)
                      |||++.+. ..|+.|..|..+..++|.+...   .|...+|                   +|+||+++++++++++|+++
T Consensus        81 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~iP~~~  138 (171)
T d1rjwa1          81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKN---AGYSVDG-------------------GYAEYCRAAADYVVKIPDNT  138 (171)
T ss_dssp             CEEEECSEEECCSCSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEEEGGGCEECCTTC
T ss_pred             eEEeeccccccccccccccCCCccccccccc---cceeccC-------------------ccccceEecHHHEEECCCCC
Confidence            99987664 4588999999999999998876   5666666                   99999999999999999999


Q ss_pred             CccchhccccchhhhHHHHHHhcCCCCCCEEEEECC
Q 018022          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL  210 (362)
Q Consensus       175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga  210 (362)
                      +++.|++ . .+.++++.+ ....+ +|++|||+|.
T Consensus       139 ~~e~A~l-~-~~~~~~~~~-~~~~~-~G~tVlViG~  170 (171)
T d1rjwa1         139 IIEVQPL-E-KINEVFDRM-LKGQI-NGRVVLTLED  170 (171)
T ss_dssp             CEEEEEG-G-GHHHHHHHH-HTTCC-SSEEEEECCC
T ss_pred             CHHHHHH-H-HHHHHHHHH-HhcCC-CCCEEEEeCC
Confidence            9876654 3 456677654 34455 5999999984

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.97  E-value=8.2e-35  Score=253.22  Aligned_cols=191  Identities=19%  Similarity=0.236  Sum_probs=152.7

Q ss_pred             eeEEEeccCCCceEEEEeecCCC-------CCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPP-------NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV   89 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~-------~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v   89 (362)
                      +||+++.++++ |+++|++.|++       .++||+|||.+++||++|++++.|..+ .++|+++|||++|+|+++|++|
T Consensus         2 ~kA~v~~~~~~-le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~-~~~P~v~GHE~~G~Vv~vG~~V   79 (201)
T d1kola1           2 NRGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKGRDV   79 (201)
T ss_dssp             EEEEEEEETTE-EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEECTTC
T ss_pred             cEEEEEeCCCc-eEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcc-cccceeccceeeeeeecccccc
Confidence            69999999998 99999999875       469999999999999999999998765 4689999999999999999999


Q ss_pred             CCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec--Cce
Q 018022           90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI--AHV  167 (362)
Q Consensus        90 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~--~~~  167 (362)
                      ++|++||||++.+..+|++|..|++++.+.|.+.......+.....  ..          ....|+|+||+++|.  .++
T Consensus        80 ~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~--~~----------~~~~Gg~aeyv~vp~~~~~l  147 (201)
T d1kola1          80 ENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYV--DM----------GDWTGGQAEYVLVPYADFNL  147 (201)
T ss_dssp             CSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCT--TS----------CCBCCCSBSEEEESSHHHHC
T ss_pred             ccccccceeEEeeeeeccCChhhhCCCccccccccccccccccccc--CC----------CccccccccEEEeehHHCeE
Confidence            9999999999999999999999999999999766543111111000  00          011359999999985  379


Q ss_pred             EEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCC
Q 018022          168 VKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA  226 (362)
Q Consensus       168 ~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~  226 (362)
                      ++||++.+..+++.+...+.++++++ ...+.+.++    +|+|++|++++|+||++|+
T Consensus       148 ~~iPd~~~~~~~~~~~~~~~~~~~a~-~~~~~~~g~----~g~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         148 LKLPDRDKAMEKINIAEVVGVQVISL-DDAPRGYGE----FDAGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             EECSCHHHHHHTCCHHHHHTEEEECG-GGHHHHHHH----HHHTCSCEEEECTTCSSCC
T ss_pred             EECCCCCChHHHHHHHHHHHHHHHHH-HhCCCCCeE----EeeCHHHHHHHHHHHHcCC
Confidence            99999866666666555777777764 444444442    5889999999999999885

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=1.2e-31  Score=228.90  Aligned_cols=167  Identities=20%  Similarity=0.336  Sum_probs=135.9

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD   96 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd   96 (362)
                      |||++.++++++|+++|++.|+|+++||||||.++|||++|++.+.|..+...+|+++|||++|+|+++|++|+++++||
T Consensus         1 m~a~~~~~~~~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~~~~P~i~GhE~~G~V~~vG~~V~~~~vGd   80 (179)
T d1uufa1           1 IKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGD   80 (179)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCCTTC
T ss_pred             CeEEEEccCCCCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeeccccccccccccccccchhhccccccCCCCC
Confidence            89999999999999999999999999999999999999999999999887788999999999999999999999999999


Q ss_pred             EEEeeC-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022           97 VVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (362)
Q Consensus        97 ~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~  175 (362)
                      ||.+.+ ..+|++|..|+.+++++|++...+........+              ....|+|+||+.+++.+++++|+...
T Consensus        81 rV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~--------------~~~~GgfaEy~~v~~~~~~~ip~~~~  146 (179)
T d1uufa1          81 LVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEP--------------GHTLGGYSQQIVVHERYVLRIRVADI  146 (179)
T ss_dssp             EEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTT--------------SBCCCSSBSEEEEEGGGCEECCCCCE
T ss_pred             EEEEcccccccCccccccCcccccCCCccccccccCCCCC--------------cccccccceEEEechHHEEECCCCCc
Confidence            998877 457999999999999999987643111111111              11125999999999999999996653


Q ss_pred             ccchhccccchhhhHHHHHHhcCCCC
Q 018022          176 PNRACLLSCGVSTGVGAAWRTANVEV  201 (362)
Q Consensus       176 ~~~aa~~~~~~~ta~~~l~~~~~~~~  201 (362)
                      ....  .. .+.++|+++ .+++++-
T Consensus       147 ~~~~--a~-~l~~a~~a~-~~a~v~~  168 (179)
T d1uufa1         147 EMIR--AD-QINEAYERM-LRGDVKY  168 (179)
T ss_dssp             EEEC--GG-GHHHHHHHH-HTTCSSS
T ss_pred             ChhH--hc-hhHHHHHHH-HHhCccc
Confidence            3222  22 556778764 4455543

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.97  E-value=3.2e-30  Score=219.59  Aligned_cols=174  Identities=31%  Similarity=0.548  Sum_probs=162.2

Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  253 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~  253 (362)
                      ++++.|+.++|++.|||+++++..++++|++|+|+|+|++|++++|+|+++|+++|++++++++|+++++++|+++++|+
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~   80 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS   80 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeC
Confidence            35678999999999999999999999999999999999999999999999999899999999999999999999999999


Q ss_pred             CCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccC
Q 018022          254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG  333 (362)
Q Consensus       254 ~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  333 (362)
                      ++   +++.+.+++++++++|+||||+|++..++.+++.++++ |+++++|........++++..++.|++++.|+++++
T Consensus        81 ~~---~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g~  156 (174)
T d1f8fa2          81 KT---QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGS  156 (174)
T ss_dssp             TT---SCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGG
T ss_pred             CC---cCHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCc-eEEEEEeecCCCcccccCHHHHHHCCCEEEEEEecC
Confidence            88   88999999999889999999999998899999999997 999999986556677899999999999999999888


Q ss_pred             CCccccHHHHHHHHHcCC
Q 018022          334 LKAKSDIPILLKRYMDKW  351 (362)
Q Consensus       334 ~~~~~~l~~~l~~~~~g~  351 (362)
                      +..+++++++++++++||
T Consensus       157 ~~~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         157 GSPKKFIPELVRLYQQGK  174 (174)
T ss_dssp             SCHHHHHHHHHHHHHTTS
T ss_pred             CChHHHHHHHHHHHHcCC
Confidence            777789999999999986

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.6e-29  Score=206.98  Aligned_cols=145  Identities=18%  Similarity=0.272  Sum_probs=130.9

Q ss_pred             eeeEEEeccCCCc--eEEE-EeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCC
Q 018022           16 QCRAAIATAPGEP--LVID-EVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDG   91 (362)
Q Consensus        16 ~~ka~~~~~~~~~--l~l~-~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~   91 (362)
                      .|||++++++|++  |+++ +++.|+|+++||||||.+++||++|.+.+.|..+. ..+|.++|||++|+|+++|+++++
T Consensus         2 ~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (150)
T d1yb5a1           2 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA   81 (150)
T ss_dssp             EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTT
T ss_pred             ceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEeecceeec
Confidence            5999999988876  8774 68999999999999999999999999999987765 578999999999999999999999


Q ss_pred             CCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 018022           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (362)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P  171 (362)
                      |++||||+..+.                             .+                   |+|+||+.+++++++++|
T Consensus        82 ~~vGdrV~~~~~-----------------------------~~-------------------G~~ae~~~v~~~~~~~iP  113 (150)
T d1yb5a1          82 FKKGDRVFTSST-----------------------------IS-------------------GGYAEYALAADHTVYKLP  113 (150)
T ss_dssp             CCTTCEEEESCC-----------------------------SS-------------------CSSBSEEEEEGGGEEECC
T ss_pred             cccCcccccccc-----------------------------cc-------------------cccccccccccccccccc
Confidence            999999975422                             12                   499999999999999999


Q ss_pred             CCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEE
Q 018022          172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF  208 (362)
Q Consensus       172 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~  208 (362)
                      +++++++||++++...|+|+++........|+++||+
T Consensus       114 ~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1         114 EKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             TTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             CCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence            9999999999999999999998888899999999984

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.95  E-value=1.4e-27  Score=203.01  Aligned_cols=172  Identities=40%  Similarity=0.718  Sum_probs=148.2

Q ss_pred             ccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCC
Q 018022          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN  255 (362)
Q Consensus       176 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~  255 (362)
                      +.+||++.|++.|+|+++++.+++++|++|+|+|+|++|++++|+|+++|+.+|++++++++|+++++++|+++++|+++
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~   81 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKD   81 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCC
Confidence            45789999999999999888999999999999999999999999999999989999999999999999999999999865


Q ss_pred             CCCcc-HHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCC
Q 018022          256 CGDKS-VSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL  334 (362)
Q Consensus       256 ~~~~~-~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  334 (362)
                        .++ ..+..+..+++++|++||++|.+..++..+..+++++|+++++|.......+++++..++ +++++.|++++++
T Consensus        82 --~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~-~~~~i~Gs~~G~~  158 (174)
T d1p0fa2          82 --YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLL-TGRSLKGSVFGGF  158 (174)
T ss_dssp             --CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHH-TTCEEEECSGGGC
T ss_pred             --chhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHh-CCCEEEEEEeCCC
Confidence              133 444444555559999999999999889899888763389999998766677777766555 5889999998876


Q ss_pred             CccccHHHHHHHHHcCC
Q 018022          335 KAKSDIPILLKRYMDKW  351 (362)
Q Consensus       335 ~~~~~l~~~l~~~~~g~  351 (362)
                      . .+|++++++++++||
T Consensus       159 ~-~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         159 K-GEEVSRLVDDYMKKK  174 (174)
T ss_dssp             C-GGGHHHHHHHHHTTS
T ss_pred             C-HHHHHHHHHHHHcCC
Confidence            4 579999999999986

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.95  E-value=1.1e-27  Score=203.53  Aligned_cols=173  Identities=38%  Similarity=0.770  Sum_probs=150.2

Q ss_pred             CccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  254 (362)
Q Consensus       175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~  254 (362)
                      ++++||++.|++.|+|+++.+.+++++|++|+|+|+|++|++++|+++++|+++|++++.+++|+++++++|+++++++.
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~   81 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPR   81 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCc
Confidence            56889999999999999988999999999999999999999999999999998999999999999999999999999875


Q ss_pred             CCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCC
Q 018022          255 NCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL  334 (362)
Q Consensus       255 ~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  334 (362)
                      . .++......+...++|+|++|||+|.+.++++++++++++.|+++++|...  ...++++..++. ++++.|++++++
T Consensus        82 ~-~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~--~~~~i~~~~~~~-~k~i~Gs~~Gs~  157 (174)
T d1e3ia2          82 E-LDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV--DEMTIPTVDVIL-GRSINGTFFGGW  157 (174)
T ss_dssp             G-CSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSS--SEEEEEHHHHHT-TCEEEECSGGGC
T ss_pred             c-chhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCC--CccccchHHHhc-cCEEEEEEeeCC
Confidence            4 112334444444455999999999999999999999999328999999853  456787777765 679999999988


Q ss_pred             CccccHHHHHHHHHcCC
Q 018022          335 KAKSDIPILLKRYMDKW  351 (362)
Q Consensus       335 ~~~~~l~~~l~~~~~g~  351 (362)
                      ...++++++++++++||
T Consensus       158 ~~~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         158 KSVDSVPNLVSDYKNKK  174 (174)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             ChHHHHHHHHHHHHCcC
Confidence            88899999999999986

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7.2e-28  Score=204.87  Aligned_cols=167  Identities=19%  Similarity=0.266  Sum_probs=151.4

Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN  252 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~  252 (362)
                      +|+++||++++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +||+++++++|+++++++|+++++|
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCc-ccccccccccccccccccCcccccc
Confidence            5889999999999999999988899999999999997 9999999999999999 8999999999999999999999999


Q ss_pred             CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022          253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF  331 (362)
Q Consensus       253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  331 (362)
                      +++   .++.+.+++.+++ ++|++||++|++ .++.++++++++ |+++.+|.. +  ..++++..++.|++++.|+++
T Consensus        80 ~~~---~~~~~~i~~~t~~~g~d~v~d~~g~~-~~~~~~~~l~~~-G~iv~~G~~-~--~~~~~~~~~~~k~~~i~g~~~  151 (174)
T d1yb5a2          80 HRE---VNYIDKIKKYVGEKGIDIIIEMLANV-NLSKDLSLLSHG-GRVIVVGSR-G--TIEINPRDTMAKESSIIGVTL  151 (174)
T ss_dssp             TTS---TTHHHHHHHHHCTTCEEEEEESCHHH-HHHHHHHHEEEE-EEEEECCCC-S--CEEECTHHHHTTTCEEEECCG
T ss_pred             ccc---ccHHHHhhhhhccCCceEEeecccHH-HHHHHHhccCCC-CEEEEEecC-C--CCCCCHHHHHHCCCEEEEEEe
Confidence            988   8999999999988 999999999965 599999999997 999999963 2  467888899999999999987


Q ss_pred             cCCCccccHHHHHHHHHcC
Q 018022          332 GGLKAKSDIPILLKRYMDK  350 (362)
Q Consensus       332 ~~~~~~~~l~~~l~~~~~g  350 (362)
                      +.. ++++++++++++++|
T Consensus       152 ~~~-~~~~~~~~~~~l~~g  169 (174)
T d1yb5a2         152 FSS-TKEEFQQYAAALQAG  169 (174)
T ss_dssp             GGC-CHHHHHHHHHHHHHH
T ss_pred             cCC-CHHHHHHHHHHHHHH
Confidence            654 367888888888764

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.95  E-value=2.8e-27  Score=201.31  Aligned_cols=175  Identities=41%  Similarity=0.735  Sum_probs=149.2

Q ss_pred             CccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  254 (362)
Q Consensus       175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~  254 (362)
                      ++++||+++|++.|+|+++.+.+++++|++|||+|+|++|++++|+++++|+++|++++++++|+++++++|+++++|+.
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~   81 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence            46889999999999999988889999999999999999999999999999988999999999999999999999999986


Q ss_pred             CCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCC
Q 018022          255 NCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL  334 (362)
Q Consensus       255 ~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  334 (362)
                      + .+++..+.+++.+++++|++||++|.+..++.+...++++ |+++.++..........+....+.+++++.|++++++
T Consensus        82 ~-~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g-~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~  159 (176)
T d2fzwa2          82 D-FSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG-WGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGW  159 (176)
T ss_dssp             G-CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTT-TCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGC
T ss_pred             c-hhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCC-ceeEEEEeeccccccccccHHHHHCCCEEEEEeeeCC
Confidence            5 1244556666666669999999999999889999999997 8888776544434344444444557899999999888


Q ss_pred             CccccHHHHHHHHHcCC
Q 018022          335 KAKSDIPILLKRYMDKW  351 (362)
Q Consensus       335 ~~~~~l~~~l~~~~~g~  351 (362)
                      ..+++++++++++++||
T Consensus       160 ~~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         160 KSVESVPKLVSEYMSKK  176 (176)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             cHHHHHHHHHHHHHcCC
Confidence            77899999999999986

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.95  E-value=9.3e-28  Score=204.04  Aligned_cols=171  Identities=28%  Similarity=0.417  Sum_probs=151.1

Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  253 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~  253 (362)
                      +++++|++++++++|+|+++ +.+++++|++|+|+|+|++|++++|+|+.+|+++|++++++++|++.++++|+++++|+
T Consensus         1 ip~e~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~   79 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNY   79 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECG
T ss_pred             CCHHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccccc
Confidence            57899999999999999985 77999999999999999999999999999999899999999999999999999999999


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHH--HHhcCcEEEEee
Q 018022          254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFE--VLHSGKILMGSL  330 (362)
Q Consensus       254 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~--~~~~~~~i~g~~  330 (362)
                      ++   +++.+.+++++++ |+|+||||+|++..+++++++++++ |+++.+|.+.....++++...  ...+++++.|+.
T Consensus        80 ~~---~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~  155 (174)
T d1jqba2          80 KN---GHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGL  155 (174)
T ss_dssp             GG---SCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBC
T ss_pred             cc---hhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcC-CEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEec
Confidence            88   8899999999988 9999999999998899999999997 999999987665555554332  345789999987


Q ss_pred             ccCCCccccHHHHHHHHHcCC
Q 018022          331 FGGLKAKSDIPILLKRYMDKW  351 (362)
Q Consensus       331 ~~~~~~~~~l~~~l~~~~~g~  351 (362)
                      ++..  +..++++++++++||
T Consensus       156 ~~~~--r~~~e~l~~li~~gk  174 (174)
T d1jqba2         156 CPGG--RLRAERLRDMVVYNR  174 (174)
T ss_dssp             CCCH--HHHHHHHHHHHHTTS
T ss_pred             CCCC--cccHHHHHHHHHcCC
Confidence            6553  466788999999886

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=3.2e-27  Score=195.19  Aligned_cols=141  Identities=19%  Similarity=0.210  Sum_probs=122.2

Q ss_pred             eEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022           18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG   95 (362)
Q Consensus        18 ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G   95 (362)
                      ++++++++|.+  |++++++.|+|+++||+|||.+++||++|++++.|.++...+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~i~~~~~G~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vG   81 (147)
T d1qora1           2 TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAG   81 (147)
T ss_dssp             EEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             eEEEEcccCCCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCCCcceeeeccccccceeeeeeeccccccc
Confidence            46889998877  9999999999999999999999999999999999998888899999999999999999999999999


Q ss_pred             CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (362)
Q Consensus        96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~  175 (362)
                      |||+...                             ..                   .|+|+||+.++.+.++++|++++
T Consensus        82 drV~~~~-----------------------------~~-------------------~G~~ae~~~v~~~~~~~~P~~~~  113 (147)
T d1qora1          82 DRVVYAQ-----------------------------SA-------------------LGAYSSVHNIIADKAAILPAAIK  113 (147)
T ss_dssp             CEEEESC-----------------------------CS-------------------SCCSBSEEEEEGGGEEECCTTSC
T ss_pred             ceeeeec-----------------------------cc-------------------cccceeEEEEehHHeEEcCcccc
Confidence            9996321                             11                   24899999999999999999998


Q ss_pred             ccchh--ccccchhhhHHHHHHhcCCCCCCEEEE
Q 018022          176 PNRAC--LLSCGVSTGVGAAWRTANVEVGSTVVI  207 (362)
Q Consensus       176 ~~~aa--~~~~~~~ta~~~l~~~~~~~~g~~vlI  207 (362)
                      +++++  .+++...++++++.+ .++++|++|||
T Consensus       114 ~~~a~a~~~~~~~~~~~~~l~~-~~~~~G~~VLI  146 (147)
T d1qora1         114 VDVAEQQKYPLKDAQRAHEILE-SRATQGSSLLI  146 (147)
T ss_dssp             CCCCGGGEEEGGGHHHHHHHHH-TTCCCBCCEEE
T ss_pred             hHHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEe
Confidence            87554  455566777776644 68999999998

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.95  E-value=2.1e-27  Score=203.38  Aligned_cols=172  Identities=23%  Similarity=0.304  Sum_probs=150.4

Q ss_pred             CccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  254 (362)
Q Consensus       175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~  254 (362)
                      +++.+|.+.|+.+|||+++.+..++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|+++++|+.
T Consensus         2 d~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~   81 (182)
T d1vj0a2           2 DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRR   81 (182)
T ss_dssp             CHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETT
T ss_pred             cHHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEecc
Confidence            34567888899999999988888999999999999999999999999999998999999999999999999999999998


Q ss_pred             CCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHH-HHhcCcEEEEeecc
Q 018022          255 NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFE-VLHSGKILMGSLFG  332 (362)
Q Consensus       255 ~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~-~~~~~~~i~g~~~~  332 (362)
                      +....+..+.+.+++++ |+|+||||+|++..++.++++++++ |+++++|...+..++++++.. ++.|++++.|++.+
T Consensus        82 ~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~  160 (182)
T d1vj0a2          82 ETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVS  160 (182)
T ss_dssp             TSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCC
T ss_pred             ccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCC-CEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeC
Confidence            72222345567788888 9999999999988899999999998 999999987666777887654 67899999999876


Q ss_pred             CCCccccHHHHHHHHHcC
Q 018022          333 GLKAKSDIPILLKRYMDK  350 (362)
Q Consensus       333 ~~~~~~~l~~~l~~~~~g  350 (362)
                      +   ++++++++++++++
T Consensus       161 ~---~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         161 D---TSHFVKTVSITSRN  175 (182)
T ss_dssp             C---HHHHHHHHHHHHTC
T ss_pred             C---HHHHHHHHHHHHHC
Confidence            4   58899999999876

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=9.1e-27  Score=197.41  Aligned_cols=168  Identities=19%  Similarity=0.312  Sum_probs=146.7

Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  253 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~  253 (362)
                      +|+++||++. ++++||+++ +++++++|++|+|+|+|++|++++|+|+.+|+++|++++++++|+++++++|+++++++
T Consensus         1 vS~e~Aal~e-pla~a~~a~-~~~~~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~   78 (171)
T d1pl8a2           1 VTFEEGALIE-PLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQI   78 (171)
T ss_dssp             SCHHHHHHHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHHH-HHHHHHHHH-HHhCCCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccc
Confidence            5788999876 889999975 77899999999999999999999999999999899999999999999999999999998


Q ss_pred             CCCCCccHHHHHH---hhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEee
Q 018022          254 KNCGDKSVSQIII---DMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL  330 (362)
Q Consensus       254 ~~~~~~~~~~~i~---~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~  330 (362)
                      ++   ++..+..+   ...+.++|++|||+|++..++.++++++++ |+++++|.+.  .+.++++..++.|++++.|++
T Consensus        79 ~~---~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~g-G~iv~~G~~~--~~~~~~~~~~~~k~l~i~Gs~  152 (171)
T d1pl8a2          79 SK---ESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGS--EMTTVPLLHAAIREVDIKGVF  152 (171)
T ss_dssp             SS---CCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCC--SCCCCCHHHHHHTTCEEEECC
T ss_pred             cc---cccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCC-CEEEEEecCC--CCCccCHHHHHHCCcEEEEEe
Confidence            77   45444333   333448999999999999899999999998 9999999854  346789999999999999986


Q ss_pred             ccCCCccccHHHHHHHHHcCCcc
Q 018022          331 FGGLKAKSDIPILLKRYMDKWSY  353 (362)
Q Consensus       331 ~~~~~~~~~l~~~l~~~~~g~l~  353 (362)
                      .+    .++++++++++++|+|+
T Consensus       153 ~~----~~~~~~al~li~~gkid  171 (171)
T d1pl8a2         153 RY----CNTWPVAISMLASKSVN  171 (171)
T ss_dssp             SC----SSCHHHHHHHHHTTSCC
T ss_pred             CC----HhHHHHHHHHHHcCCCC
Confidence            32    47899999999999985

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=1e-27  Score=199.27  Aligned_cols=149  Identities=19%  Similarity=0.124  Sum_probs=126.8

Q ss_pred             cceeeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCC
Q 018022           14 PIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVD   90 (362)
Q Consensus        14 ~~~~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~   90 (362)
                      |.+|||+++.+++++  +++++++.|+|++|||||||.++|||++|...+.|.++. ...|+++|+|++|+|++  ..++
T Consensus         1 m~~~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~~--~~~~   78 (152)
T d1xa0a1           1 MSAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQHP   78 (152)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEE--CCSS
T ss_pred             CCceEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeeec--cCCC
Confidence            457999999999876  557899999999999999999999999999988887764 57899999999999999  4467


Q ss_pred             CCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEc
Q 018022           91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV  170 (362)
Q Consensus        91 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~  170 (362)
                      +|++||+|+.....                        .+...+|                   +|+||+.+|+++++++
T Consensus        79 ~~~~g~~v~~~~~~------------------------~~~~~~G-------------------~~aEy~~v~~~~~~~i  115 (152)
T d1xa0a1          79 RFREGDEVIATGYE------------------------IGVTHFG-------------------GYSEYARLHGEWLVPL  115 (152)
T ss_dssp             SCCTTCEEEEESTT------------------------BTTTBCC-------------------SSBSEEEECGGGCEEC
T ss_pred             ccccCCEEEEecCc------------------------cccccCC-------------------CcceeeeehhhccccC
Confidence            89999999754321                        2223344                   9999999999999999


Q ss_pred             CCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEEC
Q 018022          171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFG  209 (362)
Q Consensus       171 P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G  209 (362)
                      |++++ .+||+++++..|+|.++....+++ |++|||+|
T Consensus       116 P~~l~-~~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1         116 PKGLE-RIAQEISLAELPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             CTTHH-HHEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred             CCCCC-HHHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence            99998 467888888899998888888886 99999975

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.95  E-value=3.5e-27  Score=199.77  Aligned_cols=168  Identities=24%  Similarity=0.290  Sum_probs=154.5

Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN  252 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~  252 (362)
                      +++.+||.++|++.|||+++ +..++++|++|+|+|+ |++|++++|+++.+|..+|++++++++|+++++++|++++++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~   79 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVIN   79 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeec
Confidence            57889999999999999986 7789999999999996 999999999999999879999999999999999999999999


Q ss_pred             CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022          253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF  331 (362)
Q Consensus       253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  331 (362)
                      +++   +++.+.+++.+.+ ++|++|||+|++..++.+++.++++ |+++++|.+.  .+.+++...++.|++++.|++.
T Consensus        80 ~~~---~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~k~i~i~Gs~~  153 (170)
T d1jvba2          80 ASM---QDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFG--ADLHYHAPLITLSEIQFVGSLV  153 (170)
T ss_dssp             TTT---SCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSC--CCCCCCHHHHHHHTCEEEECCS
T ss_pred             cCC---cCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccC-CEEEEecccc--CccccCHHHHHhCCcEEEEEec
Confidence            887   8889999998877 8999999999999899999999998 9999999864  3578888899999999999987


Q ss_pred             cCCCccccHHHHHHHHHcCC
Q 018022          332 GGLKAKSDIPILLKRYMDKW  351 (362)
Q Consensus       332 ~~~~~~~~l~~~l~~~~~g~  351 (362)
                      ++   +++++++++++++||
T Consensus       154 ~~---~~d~~~~l~lv~~GK  170 (170)
T d1jvba2         154 GN---QSDFLGIMRLAEAGK  170 (170)
T ss_dssp             CC---HHHHHHHHHHHHTTS
T ss_pred             CC---HHHHHHHHHHHHcCC
Confidence            65   589999999999986

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.94  E-value=8.2e-27  Score=198.52  Aligned_cols=172  Identities=37%  Similarity=0.743  Sum_probs=150.6

Q ss_pred             CccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  254 (362)
Q Consensus       175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~  254 (362)
                      ++++||+++|++.|+|+++.+.+++++|++|+|+|+|++|++++|+++++|+.+||+++.+++|+++++++|+++++|+.
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~   82 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPK   82 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECcc
Confidence            57899999999999999988889999999999999999999999999999988999999999999999999999999987


Q ss_pred             CCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccC
Q 018022          255 NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG  333 (362)
Q Consensus       255 ~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  333 (362)
                      +  ..+..+.+.+.+.+ |+|++||++|.+...+.++..+.+++|+++++|.........+++..++ +++++.|+++++
T Consensus        83 ~--~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~-~~~~i~Gs~~G~  159 (176)
T d1d1ta2          83 D--STKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLF-TGRTWKGCVFGG  159 (176)
T ss_dssp             G--CSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHH-TTCEEEECSGGG
T ss_pred             c--cchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHh-CCCEEEEEEEeC
Confidence            6  23345666666666 9999999999998888888777653389999998776677777766655 589999999998


Q ss_pred             CCccccHHHHHHHHHc
Q 018022          334 LKAKSDIPILLKRYMD  349 (362)
Q Consensus       334 ~~~~~~l~~~l~~~~~  349 (362)
                      ...++|++++++++.+
T Consensus       160 ~~~~~dip~li~~~~~  175 (176)
T d1d1ta2         160 LKSRDDVPKLVTEFLA  175 (176)
T ss_dssp             CCHHHHHHHHHHHHTT
T ss_pred             CCcHHHHHHHHHHHhC
Confidence            8889999999999875

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.94  E-value=2e-26  Score=195.48  Aligned_cols=165  Identities=21%  Similarity=0.341  Sum_probs=147.8

Q ss_pred             ccchhccccchhhhHHHHHHhc-CCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022          176 PNRACLLSCGVSTGVGAAWRTA-NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  254 (362)
Q Consensus       176 ~~~aa~~~~~~~ta~~~l~~~~-~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~  254 (362)
                      +.++|.++++++|||+++.+.. .+++|++|+|+|+|++|++++|+++.+|+.+|++++++++|+++++++|++++++++
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~   85 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR   85 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETT
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCc
Confidence            5678899999999999987655 589999999999999999999999999988999999999999999999999999987


Q ss_pred             CCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccC
Q 018022          255 NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG  333 (362)
Q Consensus       255 ~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  333 (362)
                      +    +..+.+.+.+.+ ++|++||++|+...++.+++.++++ |+++++|..   .+.++++..++.|++++.|+++++
T Consensus        86 ~----~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~---~~~~~~~~~l~~k~~~i~Gs~~~~  157 (172)
T d1h2ba2          86 R----DPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVGYG---GELRFPTIRVISSEVSFEGSLVGN  157 (172)
T ss_dssp             S----CHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEE-EEEEECCCS---SCCCCCHHHHHHTTCEEEECCSCC
T ss_pred             c----cHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCC-CEEEEEeCc---ccccCCHHHHHhCCcEEEEEEecC
Confidence            6    345666677777 9999999999998899999999998 999999963   246889999999999999998765


Q ss_pred             CCccccHHHHHHHHHcCC
Q 018022          334 LKAKSDIPILLKRYMDKW  351 (362)
Q Consensus       334 ~~~~~~l~~~l~~~~~g~  351 (362)
                         +++++++++++++||
T Consensus       158 ---~~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         158 ---YVELHELVTLALQGK  172 (172)
T ss_dssp             ---HHHHHHHHHHHHTTS
T ss_pred             ---HHHHHHHHHHHHcCC
Confidence               588999999999986

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.94  E-value=2.6e-26  Score=195.46  Aligned_cols=174  Identities=39%  Similarity=0.665  Sum_probs=145.9

Q ss_pred             CccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  254 (362)
Q Consensus       175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~  254 (362)
                      ++++||+++|++.|+|+++.+..++++|++|+|+|+|++|++++++++..|..+|++++++++|+++++++|+++++++.
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~   81 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecC
Confidence            56889999999999999998999999999999999999999999999999988999999999999999999999999875


Q ss_pred             CCCCccHHHHHHhhc-CCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccC
Q 018022          255 NCGDKSVSQIIIDMT-DGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG  333 (362)
Q Consensus       255 ~~~~~~~~~~i~~~~-~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  333 (362)
                      +  .++..+...+.+ ++|+|++||++|.+..++.++..++++ |+.+.++...+..........++.+++++.|+++++
T Consensus        82 ~--~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~  158 (176)
T d2jhfa2          82 D--YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEA-YGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGG  158 (176)
T ss_dssp             G--CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTT-TCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             C--chhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcC-CcceEEecCCCCcccccccHHHHhCCCEEEEEEEeC
Confidence            4  234444444444 449999999999999889999999996 655555544433333333345666899999999988


Q ss_pred             CCccccHHHHHHHHHcCC
Q 018022          334 LKAKSDIPILLKRYMDKW  351 (362)
Q Consensus       334 ~~~~~~l~~~l~~~~~g~  351 (362)
                      +..+++++++++++++||
T Consensus       159 ~~~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         159 FKSKDSVPKLVADFMAKK  176 (176)
T ss_dssp             CCHHHHHHHHHHHHHTTS
T ss_pred             CCHHHHHHHHHHHHHCcC
Confidence            877899999999999986

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=3.1e-26  Score=193.08  Aligned_cols=165  Identities=22%  Similarity=0.334  Sum_probs=149.2

Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  253 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~  253 (362)
                      ++++++|.++|++.|||+++ +.+++++|++|+|+|+|++|++++|+||.+|+ +|++++++++|+++++++|+++++|+
T Consensus         1 v~f~~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV~GaG~vG~~~~~~ak~~G~-~Vi~~~~~~~~~~~a~~~Ga~~~i~~   78 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGL-KQTNARPGQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNA   78 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeeccccHHHHHHHHHHcCC-ccceecchhhHHHhhhccCccccccc
Confidence            57899999999999999986 66899999999999999999999999999998 99999999999999999999999999


Q ss_pred             CCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccC
Q 018022          254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG  333 (362)
Q Consensus       254 ~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  333 (362)
                      .+   +++.+.+.+.+. +.|.++++++++..++.++++++++ |+++.+|...  .+.++++..++.|++++.|++.++
T Consensus        79 ~~---~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~k~~~i~Gs~~~~  151 (166)
T d1llua2          79 RQ---EDPVEAIQRDIG-GAHGVLVTAVSNSAFGQAIGMARRG-GTIALVGLPP--GDFPTPIFDVVLKGLHIAGSIVGT  151 (166)
T ss_dssp             TT---SCHHHHHHHHHS-SEEEEEECCSCHHHHHHHHTTEEEE-EEEEECCCCS--SEEEEEHHHHHHTTCEEEECCSCC
T ss_pred             cc---hhHHHHHHHhhc-CCcccccccccchHHHHHHHHhcCC-cEEEEEEecC--CCccCCHHHHHhCCcEEEEEeecC
Confidence            88   788888887765 5777788888888899999999998 9999999753  457889999999999999997765


Q ss_pred             CCccccHHHHHHHHHcC
Q 018022          334 LKAKSDIPILLKRYMDK  350 (362)
Q Consensus       334 ~~~~~~l~~~l~~~~~g  350 (362)
                         +++++++++++++|
T Consensus       152 ---~~d~~e~l~l~~~G  165 (166)
T d1llua2         152 ---RADLQEALDFAGEG  165 (166)
T ss_dssp             ---HHHHHHHHHHHHTT
T ss_pred             ---HHHHHHHHHHHHCc
Confidence               58899999999987

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.94  E-value=3.9e-26  Score=194.07  Aligned_cols=173  Identities=41%  Similarity=0.663  Sum_probs=146.9

Q ss_pred             CccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  254 (362)
Q Consensus       175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~  254 (362)
                      ++++||+++|++.|+|+++.+.+++++|++|+|+|+|++|++++++++..|..+|++++++++|++.++++|+++++|+.
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~   81 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN   81 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCC
Confidence            46889999999999999988899999999999999999999999999999988999999999999999999999999987


Q ss_pred             CCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccC
Q 018022          255 NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG  333 (362)
Q Consensus       255 ~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  333 (362)
                      +  +.++.+.+.+.+.+ |+|++||++|....+..++..++++ |.++.++...+.. ..++...++.+++++.|+++++
T Consensus        82 ~--~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g-~~~~~~~g~~~~~-~~~~~~~~~~~~~~i~Gs~~G~  157 (175)
T d1cdoa2          82 D--HSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKG-WGVSVLVGWTDLH-DVATRPIQLIAGRTWKGSMFGG  157 (175)
T ss_dssp             G--CSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTT-TCEEEECSCCSSS-CEEECHHHHHTTCEEEECSGGG
T ss_pred             C--cchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCC-CcceeEEEecCCc-ccCccHHHHHCCcEEEEEEEeC
Confidence            6  24455666666555 9999999999999888999988886 5555544434333 3445555667799999999998


Q ss_pred             CCccccHHHHHHHHHcCC
Q 018022          334 LKAKSDIPILLKRYMDKW  351 (362)
Q Consensus       334 ~~~~~~l~~~l~~~~~g~  351 (362)
                      +..+++++++++++++||
T Consensus       158 ~~~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         158 FKGKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             CCHHHHHHHHHHHHHTTS
T ss_pred             CcHHHHHHHHHHHHHcCC
Confidence            877899999999999986

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.94  E-value=1e-25  Score=190.62  Aligned_cols=168  Identities=21%  Similarity=0.320  Sum_probs=143.2

Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  253 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~  253 (362)
                      +|+++||++. ++++||+++ +..++++|++|+|+|+|++|++++|+|+.+|+ +|++++++++|+++++++|++++++.
T Consensus         1 VS~e~Aal~e-Pla~a~~a~-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~Ga-~vi~v~~~~~r~~~a~~~ga~~~~~~   77 (170)
T d1e3ja2           1 VSLEEGALLE-PLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVV   77 (170)
T ss_dssp             SCHHHHHTHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHHH-HHHHHHHHH-HHhCCCCCCEEEEEcccccchhhHhhHhhhcc-cccccchHHHHHHHHHHcCCcEEEec
Confidence            5788999886 788999975 77899999999999999999999999999999 99999999999999999999887755


Q ss_pred             CCC--CCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022          254 KNC--GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF  331 (362)
Q Consensus       254 ~~~--~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  331 (362)
                      +..  ...+..+.+.+..+.++|++|||+|++..++.++++++++ |+++++|...  .+.++++..++.|++++.|++.
T Consensus        78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~--~~~~~~~~~~~~k~i~i~gs~~  154 (170)
T d1e3ja2          78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGS--QMVTVPLVNACAREIDIKSVFR  154 (170)
T ss_dssp             CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCS--SCCCCCHHHHHTTTCEEEECCS
T ss_pred             cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcC-CceEEEecCC--CCCCcCHHHHHHCCCEEEEEEC
Confidence            431  1123445555555559999999999999899999999998 9999999753  3467899999999999999853


Q ss_pred             cCCCccccHHHHHHHHHcCC
Q 018022          332 GGLKAKSDIPILLKRYMDKW  351 (362)
Q Consensus       332 ~~~~~~~~l~~~l~~~~~g~  351 (362)
                      +    .++++++++++++||
T Consensus       155 ~----~~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         155 Y----CNDYPIALEMVASGR  170 (170)
T ss_dssp             C----SSCHHHHHHHHHTTS
T ss_pred             C----HHHHHHHHHHHHcCC
Confidence            3    478999999999986

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.94  E-value=6.6e-27  Score=189.00  Aligned_cols=130  Identities=18%  Similarity=0.188  Sum_probs=116.5

Q ss_pred             eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCCCC
Q 018022           17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVEG   95 (362)
Q Consensus        17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~~G   95 (362)
                      |||+++.++|+++++++++.|+|+++||+||++++|||++|++.+.|.++. ..+|+++|||++|+|           +|
T Consensus         1 MkA~~~~~~G~~l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~V-----------vG   69 (131)
T d1iz0a1           1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVV-----------EG   69 (131)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEE-----------TT
T ss_pred             CcEEEEccCCCCCEEEEccCCCCCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEee-----------cc
Confidence            899999999988999999999999999999999999999999999998765 578999999999999           39


Q ss_pred             CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022           96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP  175 (362)
Q Consensus        96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~  175 (362)
                      |+|+...                              .+                   |+|+||+.++++.++++|++++
T Consensus        70 d~V~~~~------------------------------~~-------------------G~~aey~~v~~~~~~~~P~~~~  100 (131)
T d1iz0a1          70 RRYAALV------------------------------PQ-------------------GGLAERVAVPKGALLPLPEGRP  100 (131)
T ss_dssp             EEEEEEC------------------------------SS-------------------CCSBSEEEEEGGGCEECCTTCC
T ss_pred             ceEEEEe------------------------------cc-------------------CccceeeeeCHHHeEEccCCCC
Confidence            9997432                              12                   4999999999999999999999


Q ss_pred             ccchhccccchhhhHHHHHHhcCCCCCCEEEEE
Q 018022          176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF  208 (362)
Q Consensus       176 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~  208 (362)
                      +++||.+++.+.|||+++.+..  +.|++||++
T Consensus       101 ~~~aa~~~~~~~Ta~~al~~~g--~~g~tvl~l  131 (131)
T d1iz0a1         101 VVGPVFPFAEAEAAFRALLDRG--HTGKVVVRL  131 (131)
T ss_dssp             CEEEEEEGGGHHHHHHHTTCTT--CCBEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHhcc--cCCCEEEEC
Confidence            9999999999999999876554  568888863

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=1.5e-25  Score=188.97  Aligned_cols=168  Identities=21%  Similarity=0.390  Sum_probs=151.4

Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  253 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~  253 (362)
                      +|+++||++++++.|||+++ +..++++|++|||+|+|++|++++++++..|+ +|++++++++|++.++++|+++++++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al-~~~~~~~g~~vlv~G~G~iG~~a~~~a~~~g~-~v~~~~~~~~r~~~~k~~Ga~~~~~~   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKAL-KVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNP   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeecccchhhhhHHHhcCCC-eEeccCCCHHHhhhhhhcCcceeccc
Confidence            58899999999999999986 67899999999999999999999999999999 89999999999999999999999999


Q ss_pred             CCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccC
Q 018022          254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG  333 (362)
Q Consensus       254 ~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  333 (362)
                      .+   .++.+.+++.+.+ .|.+++++++...++.++++++++ |+++.+|...  .+.+++...++.|++++.|++.++
T Consensus        79 ~~---~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~a~~~l~~~-G~i~~~g~~~--~~~~~~~~~~~~~~~~i~gs~~~~  151 (168)
T d1rjwa2          79 LK---EDAAKFMKEKVGG-VHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPP--EEMPIPIFDTVLNGIKIIGSIVGT  151 (168)
T ss_dssp             TT---SCHHHHHHHHHSS-EEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCS--SEEEEEHHHHHHTTCEEEECCSCC
T ss_pred             cc---chhhhhcccccCC-CceEEeecCCHHHHHHHHHHhccC-CceEeccccc--CCCCCCHHHHHHCCcEEEEEeeCC
Confidence            88   7888999988875 555667778888899999999998 9999999853  456888899999999999997654


Q ss_pred             CCccccHHHHHHHHHcCCcc
Q 018022          334 LKAKSDIPILLKRYMDKWSY  353 (362)
Q Consensus       334 ~~~~~~l~~~l~~~~~g~l~  353 (362)
                         +++++++++++++|+|+
T Consensus       152 ---~~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         152 ---RKDLQEALQFAAEGKVK  168 (168)
T ss_dssp             ---HHHHHHHHHHHHTTSCC
T ss_pred             ---HHHHHHHHHHHHhCCCC
Confidence               58999999999999985

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.93  E-value=1.4e-26  Score=198.18  Aligned_cols=173  Identities=22%  Similarity=0.234  Sum_probs=149.1

Q ss_pred             cchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCC
Q 018022          177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN  255 (362)
Q Consensus       177 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~  255 (362)
                      +|||++++++.|||+++++..++++|++|||+|+ |++|++++|+|+.+|+ +++++++++++.+.++++|+++++++++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~~~~~~l~~~Ga~~vi~~~~   79 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDSRS   79 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEETTC
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccc-cceeeecccccccccccccccccccCCc
Confidence            5789999999999999999999999999999987 9999999999999999 9999988999999999999999999988


Q ss_pred             CCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCC
Q 018022          256 CGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL  334 (362)
Q Consensus       256 ~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  334 (362)
                         +++.+.+++.+++ |+|++||++|++. ++.++++++++ |+++.+|.........++.. .+.+++++.++.+...
T Consensus        80 ---~~~~~~v~~~t~~~g~d~v~d~~g~~~-~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  153 (183)
T d1pqwa_          80 ---VDFADEILELTDGYGVDVVLNSLAGEA-IQRGVQILAPG-GRFIELGKKDVYADASLGLA-ALAKSASFSVVDLDLN  153 (183)
T ss_dssp             ---STHHHHHHHHTTTCCEEEEEECCCTHH-HHHHHHTEEEE-EEEEECSCGGGTTTCEEEGG-GGTTTCEEEECCHHHH
T ss_pred             ---cCHHHHHHHHhCCCCEEEEEecccchH-HHHHHHHhcCC-CEEEEEccCCCCCCcccchH-HHhCCcEEEEEEccce
Confidence               8999999999988 9999999999865 89999999997 99999997544444344433 3457999998865432


Q ss_pred             C------ccccHHHHHHHHHcCCcccce
Q 018022          335 K------AKSDIPILLKRYMDKWSYVPF  356 (362)
Q Consensus       335 ~------~~~~l~~~l~~~~~g~l~~~~  356 (362)
                      .      .++.++++++++++|+|+|.+
T Consensus       154 ~~~~~~~~~~~~~~v~~~i~~G~i~p~P  181 (183)
T d1pqwa_         154 LKLQPARYRQLLQHILQHVADGKLEVLP  181 (183)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             eccCHHHHHHHHHHHHHHHHCCCCceeC
Confidence            1      146789999999999999854

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=9e-26  Score=191.43  Aligned_cols=172  Identities=13%  Similarity=0.074  Sum_probs=141.1

Q ss_pred             CCccchhccccchhhhHHH---HHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE
Q 018022          174 VPPNRACLLSCGVSTGVGA---AWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE  249 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~---l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~  249 (362)
                      +|+++||.+++++.|||++   +.+..+.++|++|||+|+ |++|.+++|+|+..|+ +|+++.++++|.++++++|+++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga-~Viat~~s~~k~~~~~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCC-ceEEecCchHHHHHHHhcccce
Confidence            5889999999999999965   445678899999999987 9999999999999999 9999999999999999999999


Q ss_pred             EEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 018022          250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS  329 (362)
Q Consensus       250 vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  329 (362)
                      ++|+++    .+.+.++...++++|+|||++|+.. ++..+++|+++ |+++.+|.. .....++++..++.|++++.|.
T Consensus        80 vi~~~~----~~~~~~~~~~~~gvD~vid~vgg~~-~~~~l~~l~~~-Griv~~G~~-~g~~~~~~~~~~~~k~~~i~Gv  152 (176)
T d1xa0a2          80 VLARED----VMAERIRPLDKQRWAAAVDPVGGRT-LATVLSRMRYG-GAVAVSGLT-GGAEVPTTVHPFILRGVSLLGI  152 (176)
T ss_dssp             EEECC-------------CCSCCEEEEEECSTTTT-HHHHHHTEEEE-EEEEECSCC-SSSCCCCCSHHHHHTTCEEEEC
T ss_pred             eeecch----hHHHHHHHhhccCcCEEEEcCCchh-HHHHHHHhCCC-ceEEEeecc-cCcccCCCHHHHHHCCcEEEEE
Confidence            999865    3444444444449999999999987 99999999997 999999985 4556789999999999999997


Q ss_pred             eccCCCccccHHHHHHHHHcCCcccc
Q 018022          330 LFGGLKAKSDIPILLKRYMDKWSYVP  355 (362)
Q Consensus       330 ~~~~~~~~~~l~~~l~~~~~g~l~~~  355 (362)
                      .... ...++..++++.++ |+|+|.
T Consensus       153 ~~~~-~~~~~~~~~~~~la-g~lkP~  176 (176)
T d1xa0a2         153 DSVY-CPMDLRLRIWERLA-GDLKPD  176 (176)
T ss_dssp             CSSS-CCHHHHHHHHHHHH-TTTCCC
T ss_pred             eCCc-CCHHHHHHHHHHHh-cccCCC
Confidence            4332 23566777777774 888873

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.93  E-value=2.9e-25  Score=189.96  Aligned_cols=165  Identities=18%  Similarity=0.189  Sum_probs=143.3

Q ss_pred             hccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCC
Q 018022          180 CLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGD  258 (362)
Q Consensus       180 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~  258 (362)
                      +++.++++|||+++.+..++++|++|||+|+ |.+|++++|+|+..|+ +||++++++++.++++++|+++++++++   
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~Ga~~vi~~~~---   83 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKT---   83 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS---
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCHHHHHHHHhhhhhhhccccc---
Confidence            4567789999999999999999999999988 8999999999999999 9999999999999999999999999988   


Q ss_pred             ccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCC-----CCCccccCHHHHHhcCcEEEEeecc
Q 018022          259 KSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ-----PGSQLSLSSFEVLHSGKILMGSLFG  332 (362)
Q Consensus       259 ~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~-----~~~~~~~~~~~~~~~~~~i~g~~~~  332 (362)
                      +++.+.+.+.+.+ |+|+|||++|++. +++.+++++++ |+++.+|...     ...+..+++..++.|++++.|+++.
T Consensus        84 ~~~~~~~~~~~~~~Gvd~v~D~vG~~~-~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~  161 (182)
T d1v3va2          84 VNSLEEALKKASPDGYDCYFDNVGGEF-LNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVY  161 (182)
T ss_dssp             CSCHHHHHHHHCTTCEEEEEESSCHHH-HHHHGGGEEEE-EEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGG
T ss_pred             ccHHHHHHHHhhcCCCceeEEecCchh-hhhhhhhccCC-CeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEe
Confidence            7778887777766 9999999999654 99999999997 9999998532     2234467788899999999999887


Q ss_pred             CCCc---cccHHHHHHHHHcC
Q 018022          333 GLKA---KSDIPILLKRYMDK  350 (362)
Q Consensus       333 ~~~~---~~~l~~~l~~~~~g  350 (362)
                      .+..   .+.++++++|+++|
T Consensus       162 ~~~~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         162 RWQGDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             GCCHHHHHHHHHHHHHHHHTT
T ss_pred             ccChHHHHHHHHHHHHHHhCc
Confidence            7642   35588889999876

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=3.8e-25  Score=182.05  Aligned_cols=130  Identities=14%  Similarity=0.030  Sum_probs=111.4

Q ss_pred             eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 018022           17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV   93 (362)
Q Consensus        17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~   93 (362)
                      |||+++.+++++  +++++++.|+|++|||+|||.|+|||++|...+.|.++. ..+|.++|+|++|+|+++|.  ..++
T Consensus         1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~~~--~~~~   78 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSED--PRFH   78 (146)
T ss_dssp             CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEECS--TTCC
T ss_pred             CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccceeecc--CCcc
Confidence            899999999876  788999999999999999999999999999999998755 57899999999999999876  4799


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022           94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT  173 (362)
Q Consensus        94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~  173 (362)
                      +||+|++...                        ..|...+|                   +|+||+.+|+++++++|++
T Consensus        79 ~g~~v~~~~~------------------------~~g~~~~G-------------------~~Aey~~v~~~~vv~lP~~  115 (146)
T d1o89a1          79 AGQEVLLTGW------------------------GVGENHWG-------------------GLAEQARVKGDWLVAMPQG  115 (146)
T ss_dssp             TTCEEEEECT------------------------TBTTTBCC-------------------SSBSEEEECGGGCEECCTT
T ss_pred             ceeeEEeecc------------------------cceecCCC-------------------cceeeeeeeeeeEEECCCC
Confidence            9999986532                        13444445                   9999999999999999999


Q ss_pred             CCccchhccccchhhhHH
Q 018022          174 VPPNRACLLSCGVSTGVG  191 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~  191 (362)
                      +|+++||+++++..||+.
T Consensus       116 ls~~eAA~l~~a~~tA~~  133 (146)
T d1o89a1         116 QAAKEISLSEAPNFAEAI  133 (146)
T ss_dssp             SCCEEECGGGHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHH
Confidence            999999999988777754

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=3.3e-25  Score=188.90  Aligned_cols=170  Identities=14%  Similarity=0.212  Sum_probs=142.0

Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN  252 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~  252 (362)
                      +|+++||++++++.|||+++.+..++++|++|||+|+ |++|++++|+|+..|+ +|++++++++|+++++++|+++++|
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~k~~~~~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCC-eEeecccchHHHHHHHhcCCeEEEE
Confidence            5889999999999999999988889999999999987 8899999999999999 9999999999999999999999999


Q ss_pred             CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhc-CcEEEEee
Q 018022          253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHS-GKILMGSL  330 (362)
Q Consensus       253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~-~~~i~g~~  330 (362)
                      +++   +++.+.+++++++ ++|+++|++|++. +..++++++++ |+++.+|... ....+++...+..+ .+.+....
T Consensus        80 ~~~---~d~~~~v~~~t~g~g~d~v~d~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~  153 (179)
T d1qora2          80 YRE---EDLVERLKEITGGKKVRVVYDSVGRDT-WERSLDCLQRR-GLMVSFGNSS-GAVTGVNLGILNQKGSLYVTRPS  153 (179)
T ss_dssp             TTT---SCHHHHHHHHTTTCCEEEEEECSCGGG-HHHHHHTEEEE-EEEEECCCTT-CCCCCBCTHHHHHTTSCEEECCC
T ss_pred             CCC---CCHHHHHHHHhCCCCeEEEEeCccHHH-HHHHHHHHhcC-Ceeeeccccc-CCccccchhhhhccceEEEEeeE
Confidence            988   8999999999988 9999999999776 89999999997 9999998753 34455666555554 34443332


Q ss_pred             ccC-CCcc----ccHHHHHHHHHcC
Q 018022          331 FGG-LKAK----SDIPILLKRYMDK  350 (362)
Q Consensus       331 ~~~-~~~~----~~l~~~l~~~~~g  350 (362)
                      +.. ...+    +.+.++++++++|
T Consensus       154 l~~~~~~~~~~~~~~~~l~~lv~~G  178 (179)
T d1qora2         154 LQGYITTREELTEASNELFSLIASG  178 (179)
T ss_dssp             HHHHCCSHHHHHHHHHHHHHHHHTT
T ss_pred             EeeecCCHHHHHHHHHHHHHHHHCc
Confidence            221 1122    3456788888887

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=7e-26  Score=191.36  Aligned_cols=165  Identities=19%  Similarity=0.173  Sum_probs=140.1

Q ss_pred             CccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022          175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  254 (362)
Q Consensus       175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~  254 (362)
                      +.+.||.+.|+..|+|+++ +..++++|++|+|+|+|++|++++|+|+.+|+ +|++++++++|+++++++|+++++++.
T Consensus         2 p~e~AApl~cag~Ta~~al-~~~~~~~g~~vlI~GaG~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~a~~lGa~~~i~~~   79 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPL-VRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATL   79 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHH-HHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGG
T ss_pred             CHHHHHHHHHHHHHHHHHH-HHhCcCCCCEEEEECCCCcchhHHHHhhhccc-cccccccchhHHHHhhccCCcEEeecc
Confidence            4566888999999999986 56899999999999999999999999999999 899999999999999999999999986


Q ss_pred             CCCCccHHHHHHhhcCCCccEEEEcCCCHH--HHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeecc
Q 018022          255 NCGDKSVSQIIIDMTDGGADYCFECVGLAS--LVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG  332 (362)
Q Consensus       255 ~~~~~~~~~~i~~~~~~g~d~vid~~g~~~--~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~  332 (362)
                      +  +.++.+    ...+++|.++||+++..  .++.+++.++++ |+++++|....  +.+++...++.|++++.|++++
T Consensus        80 ~--~~~~~~----~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~k~~~i~Gs~~g  150 (168)
T d1piwa2          80 E--EGDWGE----KYFDTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPEQ--HEMLSLKPYGLKAVSISYSALG  150 (168)
T ss_dssp             G--TSCHHH----HSCSCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCCS--SCCEEECGGGCBSCEEEECCCC
T ss_pred             c--hHHHHH----hhhcccceEEEEecCCccchHHHHHHHhhcc-ceEEEeccccc--cccccHHHHHhCCcEEEEEeeC
Confidence            5  234332    22337999999988653  367899999997 99999997543  4466667788899999999876


Q ss_pred             CCCccccHHHHHHHHHcCCcc
Q 018022          333 GLKAKSDIPILLKRYMDKWSY  353 (362)
Q Consensus       333 ~~~~~~~l~~~l~~~~~g~l~  353 (362)
                      +   +++++++++++++|+|+
T Consensus       151 ~---~~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         151 S---IKELNQLLKLVSEKDIK  168 (168)
T ss_dssp             C---HHHHHHHHHHHHHTTCC
T ss_pred             C---HHHHHHHHHHHHhCCCC
Confidence            5   68999999999999985

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=5.6e-25  Score=185.71  Aligned_cols=165  Identities=19%  Similarity=0.268  Sum_probs=138.0

Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS  253 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~  253 (362)
                      .+++.+|.+.|+..|+|+++ +..++++|++|+|+|+|++|++++|+|+.+|+ ++++++++++|+++++++|+++++++
T Consensus         4 ~~~a~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~GaG~vG~~a~qlak~~Ga-~~i~~~~~~~~~~~a~~lGad~~i~~   81 (168)
T d1uufa2           4 EQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVNS   81 (168)
T ss_dssp             GGHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEET
T ss_pred             ccHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEeccchHHHHHHHHhhcccc-cchhhccchhHHHHHhccCCcEEEEC
Confidence            45677788888999999986 67999999999999999999999999999999 77789999999999999999999998


Q ss_pred             CCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccC
Q 018022          254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG  333 (362)
Q Consensus       254 ~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  333 (362)
                      .+   .+...   . ..+++|++||++|++..++.+++.++++ |+++++|.. +.....+++..++.|++++.|++.++
T Consensus        82 ~~---~~~~~---~-~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~-~~~~~~~~~~~l~~k~~~i~Gs~~~~  152 (168)
T d1uufa2          82 RN---ADEMA---A-HLKSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAP-ATPHKSPEVFNLIMKRRAIAGSMIGG  152 (168)
T ss_dssp             TC---HHHHH---T-TTTCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC--------CHHHHHTTTCEEEECCSCC
T ss_pred             ch---hhHHH---H-hcCCCceeeeeeecchhHHHHHHHHhcC-CEEEEeccC-CCCcccccHHHHHHCCcEEEEEeecC
Confidence            87   33211   1 1128999999999988799999999998 999999974 34455778888999999999998765


Q ss_pred             CCccccHHHHHHHHHcCCc
Q 018022          334 LKAKSDIPILLKRYMDKWS  352 (362)
Q Consensus       334 ~~~~~~l~~~l~~~~~g~l  352 (362)
                         +++++++++++++++|
T Consensus       153 ---~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         153 ---IPETQEMLDFCAEHGI  168 (168)
T ss_dssp             ---HHHHHHHHHHHHHHTC
T ss_pred             ---HHHHHHHHHHHHHcCC
Confidence               6899999999998775

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.92  E-value=1.9e-26  Score=193.68  Aligned_cols=152  Identities=18%  Similarity=0.154  Sum_probs=127.8

Q ss_pred             ceeeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCC
Q 018022           15 IQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDG   91 (362)
Q Consensus        15 ~~~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~   91 (362)
                      .+|||++++++++.  |++++++.|++++|||||||+|+|||++|.+.+.|.++. ..+|.++|+|++|+|++  +.+++
T Consensus         2 ~~~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~~--~~~~~   79 (162)
T d1tt7a1           2 TLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--SNDPR   79 (162)
T ss_dssp             CEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEE--CSSTT
T ss_pred             CcEEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeeccccccc--ccccc
Confidence            46999999987766  999999999999999999999999999999999888765 46789999999999999  45678


Q ss_pred             CCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 018022           92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD  171 (362)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P  171 (362)
                      +++||+|+..+..                        .|...+|                   +|+||+.+|+++++++|
T Consensus        80 ~~~g~~v~~~~~~------------------------~g~~~~G-------------------~~aey~~v~~~~l~~iP  116 (162)
T d1tt7a1          80 FAEGDEVIATSYE------------------------LGVSRDG-------------------GLSEYASVPGDWLVPLP  116 (162)
T ss_dssp             CCTTCEEEEESTT------------------------BTTTBCC-------------------SSBSSEEECGGGEEECC
T ss_pred             cccceeeEeeecc------------------------ceecccc-------------------ccceEEEecHHHEEECC
Confidence            9999999865431                        3444455                   99999999999999999


Q ss_pred             CCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-Ch
Q 018022          172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GS  212 (362)
Q Consensus       172 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~  212 (362)
                      +++++++||.+++...|||.++. ..+...+++|||.|+ |.
T Consensus       117 ~~ls~~~Aa~~~~~~~ta~~~~~-~~~~~~~~~Vli~ga~G~  157 (162)
T d1tt7a1         117 QNLSLKEAMVDQLLTIVDREVSL-EETPGALKDILQNRIQGR  157 (162)
T ss_dssp             TTCCHHHHHHSCSTTSEEEEECS-TTHHHHHHHTTTTCCSSE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCcce
Confidence            99999999999999999998642 234455567777776 53

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.91  E-value=4e-25  Score=190.24  Aligned_cols=174  Identities=16%  Similarity=0.133  Sum_probs=143.7

Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEE-CC-ChHHHHHHHHHHHcCCCEEEEEcCCc----hHHHHHHhcCC
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF-GL-GSIGLAVAEGARLCGATRIIGVDVIS----EKFEIGKRFGV  247 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~-Ga-g~~G~~a~~la~~~g~~~vi~~~~~~----~~~~~~~~~g~  247 (362)
                      +|+++||++++++.|||+++.+..++++|++++|+ |+ |++|++++|+||++|+ +||++.++.    ++.+.++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga-~vI~~v~~~~~~~~~~~~~~~lGa   79 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELGA   79 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCC-eEEEEEecccccchHHhhhhhccc
Confidence            58899999999999999999888999999999997 65 9999999999999999 787776554    34567789999


Q ss_pred             cEEEcCCCCCCccHHHHHHhhc---CCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCc
Q 018022          248 TEFVNSKNCGDKSVSQIIIDMT---DGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGK  324 (362)
Q Consensus       248 ~~vv~~~~~~~~~~~~~i~~~~---~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~  324 (362)
                      ++++++++....++.+.+++++   ++++|++||++|++. +..++++|+++ |+++.+|.. ...+.+++...++.|++
T Consensus        80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~-~~~~~~~l~~~-G~~v~~G~~-~~~~~~~~~~~l~~k~~  156 (189)
T d1gu7a2          80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKS-STGIARKLNNN-GLMLTYGGM-SFQPVTIPTSLYIFKNF  156 (189)
T ss_dssp             SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHH-HHHHHHTSCTT-CEEEECCCC-SSCCEEECHHHHHHSCC
T ss_pred             cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcch-hhhhhhhhcCC-cEEEEECCc-cCCCccCcHHHHHHCCc
Confidence            9999875422345666666654   348999999999776 88999999997 999999974 34567899999999999


Q ss_pred             EEEEeeccCCCc------cccHHHHHHHHHcCC
Q 018022          325 ILMGSLFGGLKA------KSDIPILLKRYMDKW  351 (362)
Q Consensus       325 ~i~g~~~~~~~~------~~~l~~~l~~~~~g~  351 (362)
                      ++.|++++.+..      ++.++++++++++||
T Consensus       157 ~i~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         157 TSAGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             EEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            999987764321      366899999999986

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.91  E-value=6.8e-25  Score=185.71  Aligned_cols=148  Identities=21%  Similarity=0.346  Sum_probs=124.3

Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN  252 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~  252 (362)
                      +++++||.+++++.|||+++ +..++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|++.++++|+++++|
T Consensus         1 ls~eeAA~l~~~~~TA~~al-~~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~~~~~~~~lGa~~~i~   78 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAAT   78 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHH-HHTTCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccchhhhhhhhccccc-ccccccccccccccccccccceeee
Confidence            57899999999999999987 5589999999999997 9999999999999999 9999999999999999999999998


Q ss_pred             CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022          253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF  331 (362)
Q Consensus       253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  331 (362)
                      +.+     ...   +.+.+ |+|+|||++|. . +++++++++++ |+++.+|.. +....++++..++.|++++.|+++
T Consensus        79 ~~~-----~~~---~~~~~~g~D~v~d~~G~-~-~~~~~~~l~~~-G~~v~~G~~-~g~~~~~~~~~~~~k~~~i~g~~~  146 (171)
T d1iz0a2          79 YAE-----VPE---RAKAWGGLDLVLEVRGK-E-VEESLGLLAHG-GRLVYIGAA-EGEVAPIPPLRLMRRNLAVLGFWL  146 (171)
T ss_dssp             GGG-----HHH---HHHHTTSEEEEEECSCT-T-HHHHHTTEEEE-EEEEEC--------CCCCTTHHHHTTCEEEECCH
T ss_pred             hhh-----hhh---hhhccccccccccccch-h-HHHHHHHHhcC-CcEEEEeCC-CCCCCCccHHHHHHCCcEEEEEeC
Confidence            764     222   33334 89999999883 3 78999999997 999999974 344567888899999999999987


Q ss_pred             cCCC
Q 018022          332 GGLK  335 (362)
Q Consensus       332 ~~~~  335 (362)
                      +.+.
T Consensus       147 ~~~~  150 (171)
T d1iz0a2         147 TPLL  150 (171)
T ss_dssp             HHHT
T ss_pred             cChh
Confidence            7653

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.90  E-value=4e-23  Score=178.27  Aligned_cols=167  Identities=25%  Similarity=0.221  Sum_probs=143.4

Q ss_pred             cchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCC
Q 018022          177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC  256 (362)
Q Consensus       177 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~  256 (362)
                      ++.+.+...++|||+++ +.+++++|++|||+|+|++|++++++|+++|+.+|++++.+++|+++++++|+++++++.+ 
T Consensus         2 ~d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~-   79 (195)
T d1kola2           2 RDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLD-   79 (195)
T ss_dssp             HHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSS-
T ss_pred             chHHhcccHHHHHHHHH-HHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCC-
Confidence            35566777999999985 7799999999999999999999999999999999999999999999999999999999988 


Q ss_pred             CCccHHHHHHhhcCC-CccEEEEcCCC---------------HHHHHHHHHHhccCCceEEEEccCCCCCc---------
Q 018022          257 GDKSVSQIIIDMTDG-GADYCFECVGL---------------ASLVQEAYACCRKGWGKTIVLGVDQPGSQ---------  311 (362)
Q Consensus       257 ~~~~~~~~i~~~~~~-g~d~vid~~g~---------------~~~~~~~~~~l~~~~G~iv~~G~~~~~~~---------  311 (362)
                        +++.+.+.+++++ ++|++||++|.               +..++.++++++++ |+++++|.+.+..+         
T Consensus        80 --~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~g-G~v~~~G~~~~~~~~~~~~~~~~  156 (195)
T d1kola2          80 --TPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKI  156 (195)
T ss_dssp             --SCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEECSCCCSCCTTCSSHHHHT
T ss_pred             --cCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcC-CEEEEeeecCCCcccchhhhhhc
Confidence              8999999999988 99999999994               36799999999998 99999998654332         


Q ss_pred             --cccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHHHcCC
Q 018022          312 --LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKW  351 (362)
Q Consensus       312 --~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~  351 (362)
                        +++++..++.|++++.+.   ...-++.++++++++.++|
T Consensus       157 ~~~~~~~~~~~~k~~~i~~g---~~~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         157 GSLSIRFGLGWAKSHSFHTG---QTPVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             TCCCCCHHHHHHTTCEEEES---SCCHHHHHHHHHHHHHTTS
T ss_pred             CceeeeHHHHHhhcceeccC---CCchHHHHHHHHHHHHcCC
Confidence              345666778889998653   3333567899999998875

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.90  E-value=6e-26  Score=192.88  Aligned_cols=156  Identities=19%  Similarity=0.134  Sum_probs=127.9

Q ss_pred             cceeeEEEeccCCCc---eEE--EEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC----------CCCCccccccc
Q 018022           14 PIQCRAAIATAPGEP---LVI--DEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP----------AVFPRILGHEA   78 (362)
Q Consensus        14 ~~~~ka~~~~~~~~~---l~l--~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~----------~~~p~~~G~e~   78 (362)
                      |++|||+++.++|++   |++  .++|.|+|+++||||||.+++||++|+++++|..+.          ...|.++|+|+
T Consensus         1 m~t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~   80 (175)
T d1gu7a1           1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEG   80 (175)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCC
T ss_pred             CceeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCccccccc
Confidence            578999999999876   455  567777889999999999999999999999886533          24688999999


Q ss_pred             eEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceee
Q 018022           79 IGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSE  158 (362)
Q Consensus        79 ~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~  158 (362)
                      +|+|+++|..+..++.||+|.....                             ..                   |+|+|
T Consensus        81 ~g~V~~~~~~~~~~~~g~~v~~~~~-----------------------------~~-------------------g~~ae  112 (175)
T d1gu7a1          81 LFEVIKVGSNVSSLEAGDWVIPSHV-----------------------------NF-------------------GTWRT  112 (175)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEESSS-----------------------------CC-------------------CCSBS
T ss_pred             ccccccccccccccccccceecccc-----------------------------cc-------------------ccccc
Confidence            9999999999999999999974322                             12                   38999


Q ss_pred             eEEeecCceEEcCCCCCccchhccccchhhhHHHHHH-hcCCCCCCEEEEEC-C-ChHHHHHHH
Q 018022          159 YTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR-TANVEVGSTVVIFG-L-GSIGLAVAE  219 (362)
Q Consensus       159 y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~-~~~~~~g~~vlI~G-a-g~~G~~a~~  219 (362)
                      |+.+++++++++|++++.+.++  .+...|||+++.. ..++++|++|||+| + |++|++++|
T Consensus       113 y~~v~~~~~~~iP~~~~~~~a~--~~~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         113 HALGNDDDFIKLPNPAQSKANG--KPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             EEEEEGGGEEEECCHHHHHHTT--CSCCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEE
T ss_pred             eeeehhhhccCCCccchhhhhc--cchHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEe
Confidence            9999999999999987644443  4567788887543 36799999999997 4 679987765

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=2.6e-23  Score=178.48  Aligned_cols=172  Identities=17%  Similarity=0.158  Sum_probs=136.0

Q ss_pred             CCccchhccccchhhhHHHHHHhcCCCCC--CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHH-HHHhcCCcE
Q 018022          174 VPPNRACLLSCGVSTGVGAAWRTANVEVG--STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE-IGKRFGVTE  249 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g--~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~-~~~~~g~~~  249 (362)
                      +|+.+.| ++++..|||+++.+..++++|  ++|||+|+ |++|++++|+||.+|+++|+++++++++.. +++++|+++
T Consensus         2 ~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~   80 (187)
T d1vj1a2           2 LSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA   80 (187)
T ss_dssp             GGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE
T ss_pred             ccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE
Confidence            4555654 566899999999999999988  88999987 999999999999999978887776666554 556799999


Q ss_pred             EEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCC---Cc--cc---cCHHHHHh
Q 018022          250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG---SQ--LS---LSSFEVLH  321 (362)
Q Consensus       250 vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~---~~--~~---~~~~~~~~  321 (362)
                      ++|+.+   +++.+.+++.++.|+|+|||++|++. +++.+++++++ |+++.+|...+.   .+  .+   .....+..
T Consensus        81 vi~~~~---~~~~~~~~~~~~~GvDvv~D~vGg~~-~~~~~~~l~~~-G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~  155 (187)
T d1vj1a2          81 AVNYKT---GNVAEQLREACPGGVDVYFDNVGGDI-SNTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPPAVEAIRKE  155 (187)
T ss_dssp             EEETTS---SCHHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEE-EEEEEC------------CCCCCHHHHHHHHH
T ss_pred             Eeeccc---hhHHHHHHHHhccCceEEEecCCchh-HHHHhhhcccc-ccEEEeccccccccccccCCchHHHHHHHHHh
Confidence            999998   89999999998779999999999765 99999999998 999999963211   11  11   12334667


Q ss_pred             cCcEEEEeeccCCCc--cccHHHHHHHHHcCC
Q 018022          322 SGKILMGSLFGGLKA--KSDIPILLKRYMDKW  351 (362)
Q Consensus       322 ~~~~i~g~~~~~~~~--~~~l~~~l~~~~~g~  351 (362)
                      |++++.|+.+.++..  .+.++++++++++||
T Consensus       156 k~i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         156 RNITRERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             TTCEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             cceEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            899999987766543  356788899999886

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=1.2e-21  Score=166.01  Aligned_cols=161  Identities=14%  Similarity=0.113  Sum_probs=130.3

Q ss_pred             CCccchhccccchhhhHHHHH---HhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE
Q 018022          174 VPPNRACLLSCGVSTGVGAAW---RTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE  249 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~---~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~  249 (362)
                      +|+.+||.++++..|||++++   +....+.+++|||+|+ |++|.+++|+||.+|+ +||+++++++|.+.++++|+++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga-~Via~~~~~~k~~~~~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCC-CeEEEecchhHHHHHHhhcccc
Confidence            578999999999999997653   3334456679999987 9999999999999999 9999999999999999999999


Q ss_pred             EEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 018022          250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS  329 (362)
Q Consensus       250 vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  329 (362)
                      ++|+++   .++.+   .+....+|.++|++|++. +...+++++++ |+++.+|.. +....+++...++.|++++.|+
T Consensus        80 vi~~~~---~~~~~---~l~~~~~~~vvD~Vgg~~-~~~~l~~l~~~-Griv~~G~~-~~~~~~~~~~~~~~k~~~i~G~  150 (177)
T d1o89a2          80 VLPRDE---FAESR---PLEKQVWAGAIDTVGDKV-LAKVLAQMNYG-GCVAACGLA-GGFTLPTTVMPFILRNVRLQGV  150 (177)
T ss_dssp             EEEGGG---SSSCC---SSCCCCEEEEEESSCHHH-HHHHHHTEEEE-EEEEECCCT-TCSCCCCCSHHHHHHCCEEEEC
T ss_pred             cccccc---HHHHH---HHHhhcCCeeEEEcchHH-HHHHHHHhccc-cceEeeccc-CCccccccHHHHHHCCCeEEEE
Confidence            999876   44322   233336899999999876 99999999997 999999985 3456788888999999999998


Q ss_pred             eccCCCccccHHHHHH
Q 018022          330 LFGGLKAKSDIPILLK  345 (362)
Q Consensus       330 ~~~~~~~~~~l~~~l~  345 (362)
                      ++... .+++..++++
T Consensus       151 ~~~~~-~~~~~~~~~~  165 (177)
T d1o89a2         151 DSVMT-PPERRAQAWQ  165 (177)
T ss_dssp             CSSSC-CHHHHHHHHH
T ss_pred             ecccC-CHHHHHHHHH
Confidence            65433 3444444443

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.85  E-value=6.7e-22  Score=166.03  Aligned_cols=159  Identities=14%  Similarity=0.098  Sum_probs=125.3

Q ss_pred             chhhhH---HHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCcc
Q 018022          185 GVSTGV---GAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKS  260 (362)
Q Consensus       185 ~~~ta~---~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~  260 (362)
                      +..|||   +++.+....+++++|||+|+ |++|.+++|+||.+|+ +||++.++++|.++++++|+++++++++     
T Consensus         4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~~~~lGad~vi~~~~-----   77 (167)
T d1tt7a2           4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISRED-----   77 (167)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHH-----
T ss_pred             hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHHHHHHHhhcccceEeccc-----
Confidence            345565   44555566778889999987 9999999999999999 9999999999999999999999998653     


Q ss_pred             HHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCCcccc
Q 018022          261 VSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSD  339 (362)
Q Consensus       261 ~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  339 (362)
                      +.......+.+ ++|+|||++|++. +++++++|+++ |+++.+|.. .....++++..++.|++++.|...... ..+.
T Consensus        78 ~~~~~~~~~~~~gvd~vid~vgg~~-~~~~~~~l~~~-G~iv~~G~~-~g~~~~~~~~~l~~k~~~i~G~~~~~~-~~~~  153 (167)
T d1tt7a2          78 VYDGTLKALSKQQWQGAVDPVGGKQ-LASLLSKIQYG-GSVAVSGLT-GGGEVPATVYPFILRGVSLLGIDSVYC-PMDV  153 (167)
T ss_dssp             HCSSCCCSSCCCCEEEEEESCCTHH-HHHHHTTEEEE-EEEEECCCS-SCSCEEECSHHHHTSCCEEEECCSSSC-CHHH
T ss_pred             hhchhhhcccCCCceEEEecCcHHH-HHHHHHHhccC-ceEEEeecc-CCCcccCCHHHHHHCCcEEEEEecCCC-CHHH
Confidence            11122233344 9999999999887 89999999998 999999985 456788999999999999999754332 2355


Q ss_pred             HHHHHHHHHcCCccc
Q 018022          340 IPILLKRYMDKWSYV  354 (362)
Q Consensus       340 l~~~l~~~~~g~l~~  354 (362)
                      ..++.+.+. +.|+|
T Consensus       154 ~~~~~~~l~-~~L~P  167 (167)
T d1tt7a2         154 RAAVWERMS-SDLKP  167 (167)
T ss_dssp             HHHHHHHTT-TTSCC
T ss_pred             HHHHHHHHH-hcCCC
Confidence            555666554 56765

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.62  E-value=7.2e-15  Score=119.63  Aligned_cols=134  Identities=13%  Similarity=0.110  Sum_probs=99.1

Q ss_pred             cceeeEEEeccC--CCc----eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCC
Q 018022           14 PIQCRAAIATAP--GEP----LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGE   87 (362)
Q Consensus        14 ~~~~ka~~~~~~--~~~----l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~   87 (362)
                      |++.|++++.+.  |.+    |++++.++|+|++||||||+++.++++........    .+...++..+.+|+|++  |
T Consensus         1 M~~~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~~----~~~g~~~~g~~vg~Vv~--S   74 (147)
T d1v3va1           1 MVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASKR----LKEGAVMMGQQVARVVE--S   74 (147)
T ss_dssp             CCEEEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGGG----SCTTSBCCCCEEEEEEE--E
T ss_pred             CcccEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEcccccccccc----cccCCccccceEEEEEE--e
Confidence            467899999874  333    99999999999999999999999998765543322    22233456688999998  5


Q ss_pred             CCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCce
Q 018022           88 NVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV  167 (362)
Q Consensus        88 ~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~  167 (362)
                      +.++|++||+|+..                                                    ++|+||.+++.+.+
T Consensus        75 ~~~~f~~GD~V~g~----------------------------------------------------~gw~ey~v~~~~~l  102 (147)
T d1v3va1          75 KNSAFPAGSIVLAQ----------------------------------------------------SGWTTHFISDGKGL  102 (147)
T ss_dssp             SCTTSCTTCEEEEC----------------------------------------------------CCSBSEEEECSSSC
T ss_pred             CCCcccCCCEEEEc----------------------------------------------------cCCEeEEEecccee
Confidence            67889999999632                                                    38999999999999


Q ss_pred             EEcCCCCC-----ccchhccccchhh-hHHHHHHhcCCCCCCEEEE
Q 018022          168 VKVDPTVP-----PNRACLLSCGVST-GVGAAWRTANVEVGSTVVI  207 (362)
Q Consensus       168 ~~~P~~l~-----~~~aa~~~~~~~t-a~~~l~~~~~~~~g~~vlI  207 (362)
                      .++|+.++     ....+++.....| ||..+..  ..+.|++||+
T Consensus       103 ~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~~--~~k~Getvv~  146 (147)
T d1v3va1         103 EKLLTEWPDKKIQYHEHVTKGFENMPAAFIEMLN--GANLGKAVVT  146 (147)
T ss_dssp             EECCTTCCTTSSCCCEEEEECGGGHHHHHHHHHT--TCCSSEEEEE
T ss_pred             eEccccccccccchhhhHhccccchHHHHHHhhC--CCCCCCEEEe
Confidence            99987643     3334445555566 4545433  3467999987

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.34  E-value=5.8e-13  Score=95.33  Aligned_cols=73  Identities=15%  Similarity=0.192  Sum_probs=65.8

Q ss_pred             CCccchhccccchhhhHHHHH---HhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC
Q 018022          174 VPPNRACLLSCGVSTGVGAAW---RTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV  247 (362)
Q Consensus       174 l~~~~aa~~~~~~~ta~~~l~---~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~  247 (362)
                      +|+++|+.++++..|||.+++   +....+++++|||+|+ |++|.+++|+++.+|+ +|+++.+++++.++++++|+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHHCCC
Confidence            578999999999999988754   4456789999999987 9999999999999999 99999999999999999884

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.98  E-value=1.6e-05  Score=64.18  Aligned_cols=97  Identities=23%  Similarity=0.231  Sum_probs=74.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC--cEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV--TEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~--~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      +..+|+|+|+|..|+.|++.|+.+|+ .|.++|.+.++++.+++...  .+....++   +.+.+.++     .+|+||-
T Consensus        31 ~pa~V~ViGaGvaG~~A~~~A~~lGA-~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~---~~l~~~~~-----~aDivI~  101 (168)
T d1pjca1          31 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNS---AEIETAVA-----EADLLIG  101 (168)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCH---HHHHHHHH-----TCSEEEE
T ss_pred             CCcEEEEECCChHHHHHHHHHhhCCC-EEEEEeCcHHHHHHHHHhhcccceeehhhh---hhHHHhhc-----cCcEEEE
Confidence            56899999999999999999999999 99999999999999887532  23333332   34444444     3899999


Q ss_pred             cCCCH-----H-HHHHHHHHhccCCceEEEEccCC
Q 018022          279 CVGLA-----S-LVQEAYACCRKGWGKTIVLGVDQ  307 (362)
Q Consensus       279 ~~g~~-----~-~~~~~~~~l~~~~G~iv~~G~~~  307 (362)
                      ++=.+     . ..+..++.|+++ +.|+.+....
T Consensus       102 aalipG~~aP~lIt~~mv~~Mk~G-SVIVDvaidq  135 (168)
T d1pjca1         102 AVLVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQ  135 (168)
T ss_dssp             CCCCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTT
T ss_pred             eeecCCcccCeeecHHHHhhcCCC-cEEEEeecCC
Confidence            76543     2 246899999998 9999997653

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.87  E-value=6.6e-05  Score=65.02  Aligned_cols=104  Identities=23%  Similarity=0.248  Sum_probs=74.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE-EcCCCCCCccHHHHHHhhcC--CCccEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTD--GGADYC  276 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~i~~~~~--~g~d~v  276 (362)
                      +|.++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+++.+...+ .|-.+  .++..+.+.+...  +++|++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~G~iDiL   80 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGGAFFQVDLED--ERERVRFVEEAAYALGRVDVL   80 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTCEEEECCTTC--HHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeEEEEeCCC--HHHHHHHHHHHHHhcCCCCeE
Confidence            6889999998 9999999999999999 99999999999988888876543 22222  2233333333322  379999


Q ss_pred             EEcCCCH-------------------------HHHHHHHHHhccC-CceEEEEccCC
Q 018022          277 FECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGVDQ  307 (362)
Q Consensus       277 id~~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~~~  307 (362)
                      |++.|..                         ...+.++..|++. +|+|+.++...
T Consensus        81 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~  137 (248)
T d2d1ya1          81 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQ  137 (248)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred             EEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccc
Confidence            9998852                         2345666777553 38999997643

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.85  E-value=1.6e-05  Score=65.11  Aligned_cols=104  Identities=20%  Similarity=0.246  Sum_probs=74.9

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc----CCCC-------------CCccHHH
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN----SKNC-------------GDKSVSQ  263 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~----~~~~-------------~~~~~~~  263 (362)
                      +..+|+|+|+|..|+.|++.|+.+|+ .|.+.|.+.++++.+++++...+.-    ..+.             ......+
T Consensus        28 ~pa~VvViGaGvaG~~Aa~~A~~lGA-~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcCcHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            46799999999999999999999999 9999999999999999987644310    0000             0011222


Q ss_pred             HHHhhcCCCccEEEEcCCCH------HHHHHHHHHhccCCceEEEEccCC
Q 018022          264 IIIDMTDGGADYCFECVGLA------SLVQEAYACCRKGWGKTIVLGVDQ  307 (362)
Q Consensus       264 ~i~~~~~~g~d~vid~~g~~------~~~~~~~~~l~~~~G~iv~~G~~~  307 (362)
                      .+.+... ..|+||-++=.+      ...+..++.|+++ +.|+.+....
T Consensus       107 ~l~~~l~-~aDlVI~talipG~~aP~lit~~mv~~Mk~G-SVIVDvaidq  154 (183)
T d1l7da1         107 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEA  154 (183)
T ss_dssp             HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGG
T ss_pred             HHHHHHH-hhhhheeeeecCCcccceeehHHHHHhcCCC-cEEEEEeecC
Confidence            3333222 589999876533      2246899999998 9999997643

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.79  E-value=0.00013  Score=63.35  Aligned_cols=105  Identities=14%  Similarity=0.159  Sum_probs=72.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCcEEEcCCCCC-CccHHHHHHhhcC--CCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFVNSKNCG-DKSVSQIIIDMTD--GGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~~vv~~~~~~-~~~~~~~i~~~~~--~g~d~  275 (362)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+ ++++.....-.-+.. .++..+.+.+...  +.+|+
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi   83 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence            5789999987 9999999999999999 999999999887765 456654433221111 1233333333221  37999


Q ss_pred             EEEcCCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          276 CFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       276 vid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      ++++.|..                         ...+.++..|+..+|+|++++..
T Consensus        84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~  139 (253)
T d1hxha_          84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASV  139 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCG
T ss_pred             EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccch
Confidence            99999852                         23456777776544999999764

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=0.00031  Score=60.39  Aligned_cols=77  Identities=17%  Similarity=0.227  Sum_probs=56.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCcEE--EcCCCCCCccHHHHHHhhcCCCccEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEF--VNSKNCGDKSVSQIIIDMTDGGADYC  276 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~~v--v~~~~~~~~~~~~~i~~~~~~g~d~v  276 (362)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +++..+.  +|-.+   .+-.+.+.+.. +++|++
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d---~~~v~~~~~~~-g~iDil   80 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGD---WEATERALGSV-GPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC---HHHHHHHHTTC-CCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCC---HHHHHHHHHHh-CCceEE
Confidence            6889999998 9999999999999999 9999999999887654 4543332  23322   33333333322 379999


Q ss_pred             EEcCCC
Q 018022          277 FECVGL  282 (362)
Q Consensus       277 id~~g~  282 (362)
                      |++.|.
T Consensus        81 VnnAg~   86 (244)
T d1pr9a_          81 VNNAAV   86 (244)
T ss_dssp             EECCCC
T ss_pred             Eecccc
Confidence            998886

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=8e-05  Score=64.54  Aligned_cols=105  Identities=20%  Similarity=0.229  Sum_probs=71.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcEEEcCCCCCCccHHHHHHhhcC--CCccEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTD--GGADYC  276 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~~i~~~~~--~g~d~v  276 (362)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+ ++-...+.-+-.+.+++.+.+.+...  +++|++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDil   83 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV   83 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            5889999998 9999999999999999 99999999999887765 33322222111012333333333322  379999


Q ss_pred             EEcCCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          277 FECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       277 id~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      |++.|..                          ...+.++..|+.++|+|+.++..
T Consensus        84 VnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~  139 (250)
T d1ydea1          84 VNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSL  139 (250)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCH
T ss_pred             EecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccc
Confidence            9998842                          23455666776644899998753

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.55  E-value=0.00051  Score=59.06  Aligned_cols=107  Identities=15%  Similarity=0.161  Sum_probs=72.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-E--EcCCCCCCccHHHHHHhhc--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-F--VNSKNCGDKSVSQIIIDMT--D  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-v--v~~~~~~~~~~~~~i~~~~--~  270 (362)
                      .|.++||+|+ +++|.+.+..+...|+ +|+.++++.++++.+.    +.|... .  .|-.+  .++..+.+++..  .
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSN--REDIYSSAKKVKAEI   82 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHHc
Confidence            5889999998 9999999999999999 9999999999876543    344432 2  22222  223333333332  2


Q ss_pred             CCccEEEEcCCCH-------------------------HHHHHHHHHhccC-CceEEEEccCCCCC
Q 018022          271 GGADYCFECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGVDQPGS  310 (362)
Q Consensus       271 ~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~~~~~~  310 (362)
                      +.+|++|++.|..                         ...+.++..|..+ +|+|+.++...+..
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~  148 (244)
T d1yb1a_          83 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV  148 (244)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC
T ss_pred             CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcC
Confidence            3799999999963                         2344566666553 37899998754433

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.54  E-value=0.00033  Score=60.26  Aligned_cols=104  Identities=13%  Similarity=0.176  Sum_probs=70.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCcE-EE--cCCCCCCccHHHHHHhhcC--CCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTE-FV--NSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~~-vv--~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      +|.++||+|+ +++|++.++.+...|+ +|+.+++++++++.+. +++-.. .+  |-.+  ++++.+.+.+...  +++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   81 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQ--PAQWKAAVDTAVTAFGGL   81 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhCcceEEEeecCC--HHHHHHHHHHHHHHhCCC
Confidence            5789999998 9999999999999999 9999999999887654 454322 22  2222  2333333333322  379


Q ss_pred             cEEEEcCCCH-------------------------HHHHHHHHHhccC-CceEEEEccCC
Q 018022          274 DYCFECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGVDQ  307 (362)
Q Consensus       274 d~vid~~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~~~  307 (362)
                      |+++++.|..                         ...+.++..|... +|+|++++...
T Consensus        82 dilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~  141 (244)
T d1nffa_          82 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIE  141 (244)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             eEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccc
Confidence            9999999862                         1233455555432 38999997643

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.53  E-value=0.00021  Score=57.79  Aligned_cols=75  Identities=15%  Similarity=0.172  Sum_probs=58.1

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcEEEcCCCCCCccHHHHHHhhcCC
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDG  271 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~~i~~~~~~  271 (362)
                      +.+..++.++.+|+|+|+|+.+.+++..++..|++++.++.|+.+|.+.+.+ ++... ++...              ..
T Consensus         8 ~l~~~~~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~-~~~~~--------------~~   72 (167)
T d1npya1           8 LIEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAY-INSLE--------------NQ   72 (167)
T ss_dssp             HHHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEE-ESCCT--------------TC
T ss_pred             HHHHcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhh-hhccc--------------cc
Confidence            4466777788999999999999999999999999899999999998776654 55433 33222              01


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      .+|++|+|++.
T Consensus        73 ~~DliINaTpi   83 (167)
T d1npya1          73 QADILVNVTSI   83 (167)
T ss_dssp             CCSEEEECSST
T ss_pred             chhhheecccc
Confidence            58999999773

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.51  E-value=0.0012  Score=57.07  Aligned_cols=103  Identities=14%  Similarity=0.151  Sum_probs=68.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EE--cCCCCCCccHHHHHHh---hc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FV--NSKNCGDKSVSQIIID---MT  269 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv--~~~~~~~~~~~~~i~~---~~  269 (362)
                      .|.++||+|+ +++|++.++.+...|+ +|+.+++++++++.+.    +.|... .+  |-.+  ++++.+.+.+   ..
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   83 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS--RSERQELMNTVANHF   83 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCC--HHHHHHHHHHHHHHh
Confidence            5889999998 9999999999999999 9999999988876543    334432 22  2222  1333333333   23


Q ss_pred             CCCccEEEEcCCCH-------------------------HHHHHHHHHhccC-CceEEEEccC
Q 018022          270 DGGADYCFECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGVD  306 (362)
Q Consensus       270 ~~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~~  306 (362)
                      ++.+|+++++.|..                         ...+.++..|... +|+|+.++..
T Consensus        84 ~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~  146 (259)
T d2ae2a_          84 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSV  146 (259)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCG
T ss_pred             CCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccc
Confidence            33699999998852                         1234455555432 3899999764

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.50  E-value=5.3e-05  Score=64.15  Aligned_cols=108  Identities=20%  Similarity=0.225  Sum_probs=75.3

Q ss_pred             chhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcEEEcCCCCCCcc
Q 018022          185 GVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKS  260 (362)
Q Consensus       185 ~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~vv~~~~~~~~~  260 (362)
                      +...|.  +.+.+++++|++||.+|+|. |..++.+|+..|. +|++++.+++-.+.++    ++|.+.+.....    +
T Consensus        64 P~~~a~--ml~~L~l~~g~~VLeIGsGs-GY~taila~l~g~-~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~g----d  135 (215)
T d1jg1a_          64 PHMVAI--MLEIANLKPGMNILEVGTGS-GWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILG----D  135 (215)
T ss_dssp             HHHHHH--HHHHHTCCTTCCEEEECCTT-SHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEES----C
T ss_pred             hhhHHH--HHHhhccCccceEEEecCCC-ChhHHHHHHhhCc-eeEEEeccHHHHHHHHHHHHHcCCceeEEEEC----c
Confidence            444443  46788999999999999876 8888888888886 8999999887655544    467654332221    1


Q ss_pred             HHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 018022          261 VSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       261 ~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  303 (362)
                      ..+..  ...+.||.|+.+.+....-..+++.|+++ |+++..
T Consensus       136 ~~~g~--~~~~pfD~Iiv~~a~~~ip~~l~~qL~~g-GrLv~p  175 (215)
T d1jg1a_         136 GSKGF--PPKAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIP  175 (215)
T ss_dssp             GGGCC--GGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             cccCC--cccCcceeEEeecccccCCHHHHHhcCCC-CEEEEE
Confidence            11100  11127999999887766456789999998 999864

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.48  E-value=0.0006  Score=58.96  Aligned_cols=104  Identities=18%  Similarity=0.298  Sum_probs=69.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCcE-EE--cCCCCCCccHHHHHHhhcC--CCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTE-FV--NSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~~-vv--~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      +|.++||+|+ +++|++.++.+...|+ +|+.+++++++++.+ ++++... .+  |-.+  ++++.+.+.+...  +++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   80 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTI--EEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEcccCC--HHHHHHHHHHHHHHcCCc
Confidence            5789999998 9999999999999999 999999999887665 4565432 22  2222  2333333333221  379


Q ss_pred             cEEEEcCCCH-------------------------HHHHHHHHHhccC-CceEEEEccCC
Q 018022          274 DYCFECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGVDQ  307 (362)
Q Consensus       274 d~vid~~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~~~  307 (362)
                      |++|.+.|..                         ...+.+++.|+.. +|+|+.++...
T Consensus        81 DilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~  140 (254)
T d1hdca_          81 DGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAA  140 (254)
T ss_dssp             CEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             cEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccch
Confidence            9999998852                         2234455554432 38999998643

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.48  E-value=0.001  Score=57.45  Aligned_cols=80  Identities=19%  Similarity=0.231  Sum_probs=56.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCcE-EE--cCCCCCCccH---HHHHHhhc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-FV--NSKNCGDKSV---SQIIIDMT  269 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~~-vv--~~~~~~~~~~---~~~i~~~~  269 (362)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+    ++.+... .+  |-.+  .+++   .+.+.+..
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~--~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS--RTERDKLMQTVAHVF   81 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCC--HHHHHHHHHHHHHHh
Confidence            6889999997 9999999999999999 999999999876654    3445443 22  3222  1222   23334444


Q ss_pred             CCCccEEEEcCCCH
Q 018022          270 DGGADYCFECVGLA  283 (362)
Q Consensus       270 ~~g~d~vid~~g~~  283 (362)
                      ++..|+++.+.|..
T Consensus        82 ~g~idilinnag~~   95 (258)
T d1ae1a_          82 DGKLNILVNNAGVV   95 (258)
T ss_dssp             TSCCCEEEECCCCC
T ss_pred             CCCcEEEecccccc
Confidence            45799999988863

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.48  E-value=0.00028  Score=60.65  Aligned_cols=103  Identities=21%  Similarity=0.334  Sum_probs=70.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCcE---EEcCCCCCCccHHHHHHhhc--CCCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTE---FVNSKNCGDKSVSQIIIDMT--DGGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~~---vv~~~~~~~~~~~~~i~~~~--~~g~  273 (362)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +++...   ..|-.+  ++++.+.+.+..  .+++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   79 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYLGANGKGLMLNVTD--PASIESVLEKIRAEFGEV   79 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCCcEEEEEecC--HHHhhhhhhhhhcccCCc
Confidence            4789999998 9999999999999999 9999999998877654 455322   223222  233333333332  2379


Q ss_pred             cEEEEcCCCH-------------------------HHHHHHHHHhccC-CceEEEEccC
Q 018022          274 DYCFECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGVD  306 (362)
Q Consensus       274 d~vid~~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~~  306 (362)
                      |++|++.|..                         ...+.+++.|++. +|+|++++..
T Consensus        80 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~  138 (243)
T d1q7ba_          80 DILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSV  138 (243)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             ceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecch
Confidence            9999998753                         2345667776432 3899999753

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=0.00029  Score=61.43  Aligned_cols=106  Identities=16%  Similarity=0.153  Sum_probs=68.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-----cCCcE-EEcCCCCCCccHHHHH-Hhhc--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVTE-FVNSKNCGDKSVSQII-IDMT--D  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~g~~~-vv~~~~~~~~~~~~~i-~~~~--~  270 (362)
                      +|.++||+|+ +++|++.+..+...|+ +|+.+++++++++.+.+     .+... .+..+. ......+.+ ....  .
T Consensus        13 ~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          13 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTM-EDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhhhhcccchhhhhhh-hhHHHHHHHHHHHHHHh
Confidence            5789999998 9999999999999999 99999999998876542     23322 222221 112222222 2221  2


Q ss_pred             CCccEEEEcCCCH-------------------------HHHHHHHHHhccCCceEEEEccCCC
Q 018022          271 GGADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVDQP  308 (362)
Q Consensus       271 ~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~~~~  308 (362)
                      +..|+++.+.|..                         ...+.++..|+.++|+++.++...+
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~  153 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAG  153 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGG
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchh
Confidence            3689999877752                         1234555566553489998876433

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=0.00078  Score=53.79  Aligned_cols=115  Identities=14%  Similarity=0.179  Sum_probs=82.5

Q ss_pred             hHHHHHHhcCC-CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHh
Q 018022          189 GVGAAWRTANV-EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIID  267 (362)
Q Consensus       189 a~~~l~~~~~~-~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~  267 (362)
                      .+.++.+..++ =.|.+++|.|-|.+|...++.++.+|+ +|++++.++-+.-.+..-|+..         ..+.+.+. 
T Consensus        10 ~~~~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~-~V~v~e~dp~~al~A~~dG~~v---------~~~~~a~~-   78 (163)
T d1li4a1          10 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGA-RVIITEIDPINALQAAMEGYEV---------TTMDEACQ-   78 (163)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE---------CCHHHHTT-
T ss_pred             HHHHHHHHhCceecCCEEEEeccccccHHHHHHHHhCCC-eeEeeecccchhHHhhcCceEe---------eehhhhhh-
Confidence            34445555554 489999999999999999999999999 9999999887765555556532         12222221 


Q ss_pred             hcCCCccEEEEcCCCHHHH-HHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcC
Q 018022          268 MTDGGADYCFECVGLASLV-QEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSG  323 (362)
Q Consensus       268 ~~~~g~d~vid~~g~~~~~-~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~  323 (362)
                          ..|+++-++|+.+.+ .+-++.|+++ ..++..|.    .+.++++..+....
T Consensus        79 ----~adivvtaTGn~~vI~~eh~~~MKdg-aIL~N~Gh----fd~EId~~~L~~~~  126 (163)
T d1li4a1          79 ----EGNIFVTTTGCIDIILGRHFEQMKDD-AIVCNIGH----FDVEIDVKWLNENA  126 (163)
T ss_dssp             ----TCSEEEECSSCSCSBCHHHHTTCCTT-EEEEECSS----STTSBCHHHHHHHC
T ss_pred             ----hccEEEecCCCccchhHHHHHhccCC-eEEEEecc----ccceecHHHHhhcc
Confidence                479999999987645 4788999996 66666665    34578877765533

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=0.00072  Score=58.35  Aligned_cols=103  Identities=22%  Similarity=0.207  Sum_probs=67.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c----C-CcE-EE--cCCCCCCccHHHHHHhhcC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----G-VTE-FV--NSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~----g-~~~-vv--~~~~~~~~~~~~~i~~~~~  270 (362)
                      .|+++||+|+ +++|++.++.+...|+ +|+.++++.++++.+.+ +    + ... .+  |-.+  .+++.+.+.+...
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~   78 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD--QQQLRDTFRKVVD   78 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCC--HHHHHHHHHHHHH
Confidence            5789999998 9999999999999999 99999999988765432 2    1 121 12  2222  2333333333322


Q ss_pred             --CCccEEEEcCCCH-----------------HHHHHHHHHhccC----CceEEEEccC
Q 018022          271 --GGADYCFECVGLA-----------------SLVQEAYACCRKG----WGKTIVLGVD  306 (362)
Q Consensus       271 --~g~d~vid~~g~~-----------------~~~~~~~~~l~~~----~G~iv~~G~~  306 (362)
                        |++|+++++.|..                 .....++..|++.    .|+|+.++..
T Consensus        79 ~~G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~  137 (254)
T d2gdza1          79 HFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL  137 (254)
T ss_dssp             HHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             HcCCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccH
Confidence              3799999999863                 1234455555432    2789998754

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.42  E-value=0.00038  Score=55.77  Aligned_cols=78  Identities=17%  Similarity=0.220  Sum_probs=60.1

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHH-HHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCc
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE-IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGA  273 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~  273 (362)
                      +..+--.+.+|||+|+|.+|.+.++.+...|++.++++.|+.+|.+ +++++|.. ++.+     +++.+.+.     .+
T Consensus        17 ~~~~~l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~-----~~~~~~l~-----~~   85 (159)
T d1gpja2          17 RELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRF-----DELVDHLA-----RS   85 (159)
T ss_dssp             HHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCG-----GGHHHHHH-----TC
T ss_pred             HHhCCcccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccc-----hhHHHHhc-----cC
Confidence            3344457889999999999999999999999988999999988865 56678753 3433     23555554     49


Q ss_pred             cEEEEcCCCH
Q 018022          274 DYCFECVGLA  283 (362)
Q Consensus       274 d~vid~~g~~  283 (362)
                      |+||.|++.+
T Consensus        86 Divi~atss~   95 (159)
T d1gpja2          86 DVVVSATAAP   95 (159)
T ss_dssp             SEEEECCSSS
T ss_pred             CEEEEecCCC
Confidence            9999999976

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.40  E-value=0.0012  Score=56.53  Aligned_cols=77  Identities=16%  Similarity=0.176  Sum_probs=55.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCcEEE--cCCCCCCccHHHHHHhhcCCCccEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFV--NSKNCGDKSVSQIIIDMTDGGADYC  276 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~~vv--~~~~~~~~~~~~~i~~~~~~g~d~v  276 (362)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +++....+  |-.+   .+..+.+.+.. +++|++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~---~~~v~~~~~~~-g~iDil   78 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGD---WDATEKALGGI-GPVDLL   78 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC---HHHHHHHHTTC-CCCSEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCC---HHHHHHHHHHc-CCCeEE
Confidence            5889999998 9999999999999999 9999999988876654 44332222  3222   33333333222 379999


Q ss_pred             EEcCCC
Q 018022          277 FECVGL  282 (362)
Q Consensus       277 id~~g~  282 (362)
                      |++.|.
T Consensus        79 VnnAg~   84 (242)
T d1cyda_          79 VNNAAL   84 (242)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999885

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.38  E-value=0.00073  Score=58.40  Aligned_cols=79  Identities=25%  Similarity=0.320  Sum_probs=56.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCcEEE---cCCCCCCccHHHHHHhhcC--CCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFV---NSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~~vv---~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      +|+++||+|+ +++|++.++.+...|+ +|+.++++.++++.+ +++|.....   |-.+  ++++.+.+.+...  +++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~--~~~v~~~~~~~~~~~g~i   80 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEIGPAACAIALDVTD--QASIDRCVAELLDRWGSI   80 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEeeCCC--HHHHHHHHHHHHHHhCCc
Confidence            4788999998 9999999999999999 999999998887654 557654322   2222  2333333333322  379


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |+++++.|.
T Consensus        81 DilVnnAg~   89 (256)
T d1k2wa_          81 DILVNNAAL   89 (256)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEeeccc
Confidence            999999885

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.34  E-value=0.00069  Score=59.23  Aligned_cols=79  Identities=19%  Similarity=0.245  Sum_probs=55.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCcEE-E--cCCCCCCccHHHHHHhhcC--CCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEF-V--NSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~~v-v--~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      +|+++||+|+ +++|++.++.+...|+ +|+.+++++++++.+. +++.... +  |-.+  .+++.+.+.+...  +.+
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g~i   80 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDHGDNVLGIVGDVRS--LEDQKQAASRCVARFGKI   80 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeeEEeccccc--HHHHHHHHHHHHHHhCCc
Confidence            5889999998 9999999999999999 9999999999876654 4554322 2  2222  2333333333222  379


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |+++++.|.
T Consensus        81 dilvnnAG~   89 (276)
T d1bdba_          81 DTLIPNAGI   89 (276)
T ss_dssp             CEEECCCCC
T ss_pred             ccccccccc
Confidence            999998873

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.34  E-value=2e-05  Score=66.83  Aligned_cols=101  Identities=24%  Similarity=0.349  Sum_probs=72.2

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCC-EEEEEcCCchHHHHHHh----cCCcE--EEcCCCCCCccHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQII  265 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~----~g~~~--vv~~~~~~~~~~~~~i  265 (362)
                      +.+.+++++|++||-+|+|. |..++.+|+..|.. +|++++.+++..+.+++    .+...  ++..+.   .+   ..
T Consensus        67 ~l~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~---~~---~~  139 (213)
T d1dl5a1          67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDG---YY---GV  139 (213)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG---GG---CC
T ss_pred             HHHhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCch---HH---cc
Confidence            46788999999999999877 88888899987632 89999999988877764    34432  222111   00   00


Q ss_pred             HhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 018022          266 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       266 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  303 (362)
                        ...+.||+|+...+.....+.+++.|+++ |+++..
T Consensus       140 --~~~~~fD~I~~~~~~~~~p~~l~~~LkpG-G~lv~p  174 (213)
T d1dl5a1         140 --PEFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP  174 (213)
T ss_dssp             --GGGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEEE
T ss_pred             --ccccchhhhhhhccHHHhHHHHHHhcCCC-cEEEEE
Confidence              11126999999877666456788999998 999873

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.33  E-value=0.0011  Score=57.11  Aligned_cols=102  Identities=19%  Similarity=0.347  Sum_probs=69.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-----HhcCCcE-EE--cCCCCCCccHHHHHHhhcC-
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-----KRFGVTE-FV--NSKNCGDKSVSQIIIDMTD-  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-----~~~g~~~-vv--~~~~~~~~~~~~~i~~~~~-  270 (362)
                      +|+++||+|+ +++|++.++.+...|+ +|+.++++.++++.+     ++.|... .+  |-.+  ++++.+.+.+... 
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN--YEEVKKLLEAVKEK   80 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence            4789999998 9999999999999999 999999998876543     3345443 22  2222  2333333333222 


Q ss_pred             -CCccEEEEcCCCH-------------------------HHHHHHHHHhccC-CceEEEEcc
Q 018022          271 -GGADYCFECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGV  305 (362)
Q Consensus       271 -~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~  305 (362)
                       +++|++|++.|..                         ...+.++..|++. +|+++.++.
T Consensus        81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S  142 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGS  142 (251)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccccccccccccc
Confidence             3799999999862                         2355677788553 379998875

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.33  E-value=0.0008  Score=58.25  Aligned_cols=102  Identities=21%  Similarity=0.310  Sum_probs=68.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EE--cCCCCCCccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FV--NSKNCGDKSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv--~~~~~~~~~~~~~i~~~~~--  270 (362)
                      +|.++||+|+ +++|++.++.+...|+ +|+.+++++++++.+.    +.|... .+  |-.+  ++++.+.+.+...  
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   80 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTS--EEAVIGTVDSVVRDF   80 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            5889999998 9999999999999999 9999999998876543    345432 22  2222  2333333333222  


Q ss_pred             CCccEEEEcCCCH--------------------------HHHHHHHHHh--ccCCceEEEEccC
Q 018022          271 GGADYCFECVGLA--------------------------SLVQEAYACC--RKGWGKTIVLGVD  306 (362)
Q Consensus       271 ~g~d~vid~~g~~--------------------------~~~~~~~~~l--~~~~G~iv~~G~~  306 (362)
                      +++|++|++.|..                          ...+.+++.|  +. +|+|++++..
T Consensus        81 g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~II~isS~  143 (260)
T d1zema1          81 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASM  143 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCH
T ss_pred             CCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc-CCCCCeeech
Confidence            3799999988842                          1344555555  34 4999999753

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.33  E-value=0.001  Score=57.21  Aligned_cols=105  Identities=17%  Similarity=0.172  Sum_probs=68.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCC--c-EEEcCCCCCCccHHHHHHhhcC--CCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGV--T-EFVNSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~--~-~vv~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      .|.++||+|+ +++|++.++.+...|+ +|+.++++.++++.+.+ ++.  . ..+.-+-.+++++.+.+.+...  |++
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   83 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence            4789999998 9999999999999999 99999999988876543 332  1 2222211011222233332221  379


Q ss_pred             cEEEEcCCCH-------------------------HHHHHHHHHhccC-C-ceEEEEccC
Q 018022          274 DYCFECVGLA-------------------------SLVQEAYACCRKG-W-GKTIVLGVD  306 (362)
Q Consensus       274 d~vid~~g~~-------------------------~~~~~~~~~l~~~-~-G~iv~~G~~  306 (362)
                      |++|++.|..                         ...+.++..|++. + |+|+.++..
T Consensus        84 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~  143 (251)
T d1zk4a1          84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSI  143 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCG
T ss_pred             eEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeecc
Confidence            9999998862                         2345566666553 1 588888653

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.32  E-value=6.7e-05  Score=64.36  Aligned_cols=98  Identities=14%  Similarity=0.159  Sum_probs=64.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCC----ccHHHHHHhhcCC-Ccc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGD----KSVSQIIIDMTDG-GAD  274 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~----~~~~~~i~~~~~~-g~d  274 (362)
                      +|.+|||+|+ +++|++.++.+...|+ +|+.+++++.+..      ............    ..+...+.+..+. ++|
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD   73 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   73 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCccccc------cccceeecccCcHHHHHHHHHHHHHHhCCCCce
Confidence            4789999998 9999999999999999 9999987654321      111221111000    1123333344444 799


Q ss_pred             EEEEcCCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          275 YCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       275 ~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      ++|++.|.-                          ...+.++..|+++ |+|++++..
T Consensus        74 ~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-G~Iv~isS~  130 (236)
T d1dhra_          74 AILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG-GLLTLAGAK  130 (236)
T ss_dssp             EEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred             EEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc-cceeEEccH
Confidence            999998841                          1244567778887 999999764

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.31  E-value=0.0019  Score=54.77  Aligned_cols=97  Identities=20%  Similarity=0.242  Sum_probs=65.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.++++++++   ++.+...+.-.-.   .. .+.+.+.. +.+|+++++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~~~l---~~~~~~~~~~Dv~---~~-~~~~~~~~-g~iD~lVnn   73 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELL---KRSGHRYVVCDLR---KD-LDLLFEKV-KEVDILVLN   73 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH---HHTCSEEEECCTT---TC-HHHHHHHS-CCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHH---HhcCCcEEEcchH---HH-HHHHHHHh-CCCcEEEec
Confidence            4789999998 9999999999999999 999999887654   4455443332111   22 34444433 369999999


Q ss_pred             CCCH-------------------------HHHHHHHHHhccC-CceEEEEccC
Q 018022          280 VGLA-------------------------SLVQEAYACCRKG-WGKTIVLGVD  306 (362)
Q Consensus       280 ~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~~  306 (362)
                      .|..                         ...+.++..|+.. +|+++.++..
T Consensus        74 AG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~  126 (234)
T d1o5ia_          74 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSF  126 (234)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             ccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccc
Confidence            8853                         1234555555432 3788888653

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.30  E-value=0.0017  Score=56.16  Aligned_cols=103  Identities=19%  Similarity=0.154  Sum_probs=67.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE---EEcCCCCCCccHHH---HHHhhc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE---FVNSKNCGDKSVSQ---IIIDMT  269 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~---vv~~~~~~~~~~~~---~i~~~~  269 (362)
                      +|.++||+|+ +++|++.++.+...|+ +|+.+++++++++.+.    +.+...   ..|-.+  +++..+   .+.+..
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   83 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL--RPEREKLMQTVSSMF   83 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCC--HHHHHHHHHHHHHHh
Confidence            5889999998 9999999999999999 9999999998876543    233322   123222  123333   333333


Q ss_pred             CCCccEEEEcCCCH-------------------------HHHHHHHHHhccC-CceEEEEccC
Q 018022          270 DGGADYCFECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGVD  306 (362)
Q Consensus       270 ~~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~~  306 (362)
                      ++.+|+++++.|..                         ...+.++..|+.. +|+|++++..
T Consensus        84 ~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~  146 (259)
T d1xq1a_          84 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSI  146 (259)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--
T ss_pred             CCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccc
Confidence            44699999999863                         1234555666432 3899998764

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=0.0011  Score=57.14  Aligned_cols=79  Identities=22%  Similarity=0.369  Sum_probs=54.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCC-cEE--E--cCCCCCCccHHHHHHhhcC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGV-TEF--V--NSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~-~~v--v--~~~~~~~~~~~~~i~~~~~  270 (362)
                      +|.++||+|+ +++|.+.+..+...|+ +|+.+++++++++.+.    +.+. ..+  +  |-.+  ++++.+.+.+...
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~--~~~v~~~v~~~~~   85 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN--EEDILSMFSAIRS   85 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCC--HHHHHHHHHHHHH
Confidence            4789999998 9999999999999999 9999999998876643    3332 122  2  2222  2333333333322


Q ss_pred             --CCccEEEEcCCC
Q 018022          271 --GGADYCFECVGL  282 (362)
Q Consensus       271 --~g~d~vid~~g~  282 (362)
                        +++|++|.+.|.
T Consensus        86 ~~g~iD~lVnnAg~   99 (257)
T d1xg5a_          86 QHSGVDICINNAGL   99 (257)
T ss_dssp             HHCCCSEEEECCCC
T ss_pred             hcCCCCEEEecccc
Confidence              379999999986

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.29  E-value=0.00046  Score=59.22  Aligned_cols=79  Identities=23%  Similarity=0.275  Sum_probs=56.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcEEE-cCCCCCCccHHHHHHhhcC--CCccE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFV-NSKNCGDKSVSQIIIDMTD--GGADY  275 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~vv-~~~~~~~~~~~~~i~~~~~--~g~d~  275 (362)
                      +|.++||+|+ +++|++.++.+...|+ +|+.+++++++++.+.+ ++...+. |-.+  ++++.+.+.+...  +++|+
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~iDi   80 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVAD--PASVERGFAEALAHLGRLDG   80 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTC--HHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCeEEEEecCC--HHHHHHHHHHHHHhcCCceE
Confidence            4789999998 9999999999999999 99999999998877654 5554332 3222  2333333333222  37999


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      +|++.|.
T Consensus        81 lVnnAG~   87 (242)
T d1ulsa_          81 VVHYAGI   87 (242)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999886

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.28  E-value=0.0009  Score=55.07  Aligned_cols=75  Identities=16%  Similarity=0.215  Sum_probs=55.3

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c----CC-cEEEcCCCCCCccHHHHHHhhcCCC
Q 018022          200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GV-TEFVNSKNCGDKSVSQIIIDMTDGG  272 (362)
Q Consensus       200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~----g~-~~vv~~~~~~~~~~~~~i~~~~~~g  272 (362)
                      =+|.++||+|+ |++|.+.++.+...|+ +|+.++++.++.+.+.+ +    .. ....|-.+      .+.+.+..+ +
T Consensus        21 l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~------~~~~~~~~~-~   92 (191)
T d1luaa1          21 VKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD------DASRAEAVK-G   92 (191)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS------HHHHHHHTT-T
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhccchhhhhhhccc------HHHHHHHhc-C
Confidence            37899999997 9999999999999999 99999999988766543 2    21 22344333      334444443 6


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|++|++.|.
T Consensus        93 iDilin~Ag~  102 (191)
T d1luaa1          93 AHFVFTAGAI  102 (191)
T ss_dssp             CSEEEECCCT
T ss_pred             cCeeeecCcc
Confidence            9999999874

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.25  E-value=0.00093  Score=57.54  Aligned_cols=81  Identities=17%  Similarity=0.331  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-C--hHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcEEEcCCCCCCccHHHHHHhhc--CC
Q 018022          201 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMT--DG  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g--~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~~i~~~~--~~  271 (362)
                      +|+++||+|+ |  ++|++.++.+...|+ +|+.++++++..+.+++    .+....+..+-.+++++.+.+.+..  -+
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG   85 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcC
Confidence            5789999997 5  699999999999999 89999988765554432    3434444332211233333332222  13


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|+++++.|.
T Consensus        86 ~iDilVnnag~   96 (256)
T d1ulua_          86 GLDYLVHAIAF   96 (256)
T ss_dssp             SEEEEEECCCC
T ss_pred             CceEEEecccc
Confidence            79999998874

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.24  E-value=0.0013  Score=56.77  Aligned_cols=81  Identities=17%  Similarity=0.199  Sum_probs=54.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCcE-EEcCCCCCCccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      +|.++||+|+ +++|++.++.+...|+ +|+.+++++++++.+    ++.|... .+.-+-.+++++.+.+.+...  ++
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~   88 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            6889999998 9999999999999999 999999998887654    3455433 222211011233333332221  37


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|+++.+.|.
T Consensus        89 iDilvnnAG~   98 (255)
T d1fmca_          89 VDILVNNAGG   98 (255)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEeeeCCcC
Confidence            9999999886

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.19  E-value=0.0024  Score=54.63  Aligned_cols=103  Identities=21%  Similarity=0.279  Sum_probs=67.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchH--HHHHHhcCCcEE-E--cCCCCCCccHHHHHHhhcC--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--FEIGKRFGVTEF-V--NSKNCGDKSVSQIIIDMTD--GG  272 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~--~~~~~~~g~~~v-v--~~~~~~~~~~~~~i~~~~~--~g  272 (362)
                      +|.++||+|+ +++|.+.++.+...|+ +|+++++++++  .+.+++.|.... +  |-.+  .+++.+.+.+...  ++
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~--~~~v~~~~~~~~~~~G~   80 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ--PGDVEAFGKQVISTFGR   80 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHcCCcEEEEEeeCCC--HHHHHHHHHHHHHHcCC
Confidence            4789999998 9999999999999999 99999987643  234556665432 2  2222  2333333333322  37


Q ss_pred             ccEEEEcCCCH-------------------------HHHHHHHHHhccC-CceEEEEccC
Q 018022          273 ADYCFECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGVD  306 (362)
Q Consensus       273 ~d~vid~~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~~  306 (362)
                      +|++|++.|..                         ...+.++..|++. +|+|+.++..
T Consensus        81 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~  140 (247)
T d2ew8a1          81 CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTST  140 (247)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             CCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccc
Confidence            99999998862                         1234556666442 3899998754

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=97.18  E-value=0.0021  Score=55.48  Aligned_cols=104  Identities=23%  Similarity=0.254  Sum_probs=67.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----c--CCcE-EE--cCCCCCCccHHHHHHhhcC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----F--GVTE-FV--NSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~--g~~~-vv--~~~~~~~~~~~~~i~~~~~  270 (362)
                      .|.++||+|+ +++|++.++.+...|+ +|+.++++.++++.+.+    .  +... .+  |-.+  ++++.+.+.+...
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~--~~~v~~~~~~~~~   79 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD--EAQVEAYVTATTE   79 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCC--HHHHHHHHHHHHH
Confidence            4789999998 9999999999999999 99999999988765432    2  2221 12  3222  2333333333322


Q ss_pred             --CCccEEEEcCCCH--------------------------HHHHHHHHHhcc-CCceEEEEccCC
Q 018022          271 --GGADYCFECVGLA--------------------------SLVQEAYACCRK-GWGKTIVLGVDQ  307 (362)
Q Consensus       271 --~g~d~vid~~g~~--------------------------~~~~~~~~~l~~-~~G~iv~~G~~~  307 (362)
                        |++|++|++.|..                          ...+.++..|+. ++|+|+.++...
T Consensus        80 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~  145 (258)
T d1iy8a_          80 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVG  145 (258)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGG
T ss_pred             HhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHh
Confidence              3799999998741                          123445555542 248999997643

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.12  E-value=0.0019  Score=55.54  Aligned_cols=103  Identities=14%  Similarity=0.199  Sum_probs=67.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcEE-E--cCCCCCCccHHHHHHhhc--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEF-V--NSKNCGDKSVSQIIIDMT--D  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~v-v--~~~~~~~~~~~~~i~~~~--~  270 (362)
                      ++.++||+|+ +++|++.++.+...|+ +|+.+++++++++.+.    +.|.... +  |-.+  ++++.+.+.+..  -
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~--~~~v~~~~~~~~~~~   85 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSK--KEEISEVINKILTEH   85 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHhc
Confidence            4678899998 9999999999989999 9999999988876543    3454322 2  2222  233333333322  2


Q ss_pred             CCccEEEEcCCCH-------------------------HHHHHHHHHhccC-CceEEEEccC
Q 018022          271 GGADYCFECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGVD  306 (362)
Q Consensus       271 ~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~~  306 (362)
                      +++|++|.+.|..                         ...+.++..|+.. +|+|+.++..
T Consensus        86 g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~  147 (251)
T d2c07a1          86 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSI  147 (251)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCT
T ss_pred             CCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCH
Confidence            3799999988862                         2234455555332 3899999753

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.12  E-value=0.0005  Score=59.26  Aligned_cols=102  Identities=13%  Similarity=0.113  Sum_probs=69.9

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCC-EEEEEcCCchHHHHHHh----cC-CcEEEcCCCCCCccHHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKR----FG-VTEFVNSKNCGDKSVSQIII  266 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~----~g-~~~vv~~~~~~~~~~~~~i~  266 (362)
                      +...+++++|++||=.|+|. |.++..+|++.|.. +|++++.+++.++.+++    ++ ...+-...    .++.    
T Consensus        77 Ii~~l~i~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~----~Di~----  147 (250)
T d1yb2a1          77 IIMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSR----SDIA----  147 (250)
T ss_dssp             ----CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEEC----SCTT----
T ss_pred             HHHHcCCCCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEE----eeee----
Confidence            34668999999999999876 77777888876543 99999999999888775    22 22221111    1111    


Q ss_pred             hhcCC-CccEEEEcCCCH-HHHHHHHHHhccCCceEEEEc
Q 018022          267 DMTDG-GADYCFECVGLA-SLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       267 ~~~~~-g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      +.... .||.|+--...+ ..+..+.+.|+++ |+++++.
T Consensus       148 ~~~~~~~fD~V~ld~p~p~~~l~~~~~~LKpG-G~lv~~~  186 (250)
T d1yb2a1         148 DFISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYL  186 (250)
T ss_dssp             TCCCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEE
T ss_pred             cccccceeeeeeecCCchHHHHHHHHHhcCCC-ceEEEEe
Confidence            12223 799998656554 5588999999998 9999874

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.11  E-value=0.0025  Score=54.92  Aligned_cols=105  Identities=20%  Similarity=0.287  Sum_probs=66.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc-hHHHHH-----HhcCCcEEEcCCCCC-CccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFEIG-----KRFGVTEFVNSKNCG-DKSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~-~~~~~~-----~~~g~~~vv~~~~~~-~~~~~~~i~~~~~--  270 (362)
                      +|.++||+|+ +++|++.++.+...|+ +|+.+++++ ++++.+     ++.|.......-+.. ++++.+.+.+...  
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            5788999988 9999999999999999 999999875 444433     233544332221111 2233333333222  


Q ss_pred             CCccEEEEcCCCH-------------------------HHHHHHHHHhccC-CceEEEEccC
Q 018022          271 GGADYCFECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGVD  306 (362)
Q Consensus       271 ~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~~  306 (362)
                      +++|++|++.|..                         ...+.++..|++. +|+|+.++..
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~  143 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASA  143 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccc
Confidence            3799999999863                         2345566676652 3899998754

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.11  E-value=0.0016  Score=56.01  Aligned_cols=101  Identities=15%  Similarity=0.127  Sum_probs=67.1

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC----CcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG----VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g----~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      ++||+|+ +++|++.+..+...|+ +|++++++.++++.+++.+    ...+.+.++  ...+.+.+.+.. |++|++|+
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~--~~~~~~~~~~~~-G~iDiLVn   77 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPMSEQE--PAELIEAVTSAY-GQVDVLVS   77 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEECCCCS--HHHHHHHHHHHH-SCCCEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhhhCcEEEeccCCHHH--HHHHHHHHHHHc-CCCCEEEE
Confidence            6899998 9999999999999999 9999999888887766532    222333222  233444444433 37999998


Q ss_pred             cCCCH--------------------------HHHHHHHHHhccC-CceEEEEccCCC
Q 018022          279 CVGLA--------------------------SLVQEAYACCRKG-WGKTIVLGVDQP  308 (362)
Q Consensus       279 ~~g~~--------------------------~~~~~~~~~l~~~-~G~iv~~G~~~~  308 (362)
                      +.|..                          ...+.++..|++. +|+|++++...+
T Consensus        78 NAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~  134 (252)
T d1zmta1          78 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATP  134 (252)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTT
T ss_pred             CCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccc
Confidence            76631                          1234555566442 389999976543

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.10  E-value=0.0027  Score=54.64  Aligned_cols=78  Identities=17%  Similarity=0.227  Sum_probs=53.7

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCcEE-E--cCCCCCCccHHHHHHhhc--CC
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEF-V--NSKNCGDKSVSQIIIDMT--DG  271 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~~v-v--~~~~~~~~~~~~~i~~~~--~~  271 (362)
                      |+.+||+|+ +++|++.++.+...|+ +|+.+++++++++.+    ++.|.... +  |-.+  .+++.+.+.+..  -+
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~--~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS--VPEIEALVAAVVERYG   78 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence            677899998 9999999999999999 999999998877654    34454332 2  2222  133333333322  13


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|++|++.|.
T Consensus        79 ~iDilVnnAG~   89 (257)
T d2rhca1          79 PVDVLVNNAGR   89 (257)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEecccc
Confidence            79999999886

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=97.09  E-value=0.0029  Score=54.66  Aligned_cols=79  Identities=22%  Similarity=0.225  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCch-HHH----HHHhcCCcEE-E--cCCCCCCccHHHHHHhhcC-
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-KFE----IGKRFGVTEF-V--NSKNCGDKSVSQIIIDMTD-  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~-~~~----~~~~~g~~~v-v--~~~~~~~~~~~~~i~~~~~-  270 (362)
                      .|+++||+|+ +++|++.++.+...|+ +|++++++.+ +++    .+++.|.... +  |-.+  ++++.+.+.+... 
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~--~~~v~~~~~~~~~~   82 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV--ESDVINLVQSAIKE   82 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence            5789999987 9999999999999999 9999998754 333    3345565432 2  2222  2333333333222 


Q ss_pred             -CCccEEEEcCCC
Q 018022          271 -GGADYCFECVGL  282 (362)
Q Consensus       271 -~g~d~vid~~g~  282 (362)
                       +++|+++++.|.
T Consensus        83 ~G~iDiLVnnAG~   95 (261)
T d1geea_          83 FGKLDVMINNAGL   95 (261)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             hCCCCEeecccee
Confidence             379999999886

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=97.08  E-value=0.0014  Score=56.52  Aligned_cols=104  Identities=13%  Similarity=0.070  Sum_probs=63.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcE--EEcCCCCCC-ccHHHHHHhhcC--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGD-KSVSQIIIDMTD--  270 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~--vv~~~~~~~-~~~~~~i~~~~~--  270 (362)
                      .|++|||+|+ +++|++.+......|+ +|+++.++.++.+.+.+    .+-..  .+..+...+ .++.+.+.+...  
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~-~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNL-KNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCC-SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            4889999987 9999999999999999 76666665555444332    22222  222221001 223333333322  


Q ss_pred             CCccEEEEcCCCH-----------------HHHHHHHHHhcc-----CCceEEEEccC
Q 018022          271 GGADYCFECVGLA-----------------SLVQEAYACCRK-----GWGKTIVLGVD  306 (362)
Q Consensus       271 ~g~d~vid~~g~~-----------------~~~~~~~~~l~~-----~~G~iv~~G~~  306 (362)
                      +++|++|.+.|..                 ...+.++..|..     + |+|+.++..
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~-g~Ii~isS~  139 (254)
T d1sbya1          83 KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPG-GIIANICSV  139 (254)
T ss_dssp             SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC-EEEEEECCG
T ss_pred             CCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCC-ceEEEEech
Confidence            3799999999963                 224455556633     3 889988654

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.06  E-value=0.0021  Score=51.27  Aligned_cols=86  Identities=19%  Similarity=0.227  Sum_probs=58.5

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC-cEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  282 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~  282 (362)
                      +|.|+|+|.+|...+..++..|+ +|++.++++++.+.+++.|. ++..+..+        .+     ...|+||-++..
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~g~-~V~~~d~~~~~~~~a~~~~~~~~~~~~~~--------~~-----~~~DiIilavp~   67 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQDLS--------LL-----QTAKIIFLCTPI   67 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEESCGG--------GG-----TTCSEEEECSCH
T ss_pred             EEEEEeecHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHhhccceeeeecc--------cc-----cccccccccCcH
Confidence            58899999999998888889999 99999999999999998885 44432211        11     147888887764


Q ss_pred             HH---HHHHHHHHhccCCceEEEEc
Q 018022          283 AS---LVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       283 ~~---~~~~~~~~l~~~~G~iv~~G  304 (362)
                      ..   .++++...+.++ -.++.++
T Consensus        68 ~~~~~vl~~l~~~l~~~-~iv~~~~   91 (165)
T d2f1ka2          68 QLILPTLEKLIPHLSPT-AIVTDVA   91 (165)
T ss_dssp             HHHHHHHHHHGGGSCTT-CEEEECC
T ss_pred             hhhhhhhhhhhhhcccc-cceeecc
Confidence            42   233344444443 3444443

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00097  Score=57.20  Aligned_cols=77  Identities=19%  Similarity=0.341  Sum_probs=58.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc-CCcE-EEcCCCCCCccHHHHHHhhcCCCccEEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVTE-FVNSKNCGDKSVSQIIIDMTDGGADYCF  277 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-g~~~-vv~~~~~~~~~~~~~i~~~~~~g~d~vi  277 (362)
                      +|.++||+|+ +++|++.++.+...|+ +|+++++++++++.+.+. +... +.|...   .+..+.+.+..+ ++|+++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~~-~id~lV   79 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTK---KKQIDQFANEVE-RLDVLF   79 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTC---HHHHHHHHHHCS-CCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhccCCceeeeeccc---cccccccccccc-cceeEE
Confidence            5789999988 9999999999999999 999999999988877664 3322 223222   455555555443 799999


Q ss_pred             EcCCC
Q 018022          278 ECVGL  282 (362)
Q Consensus       278 d~~g~  282 (362)
                      ++.|.
T Consensus        80 n~ag~   84 (245)
T d2ag5a1          80 NVAGF   84 (245)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            99886

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.04  E-value=0.0028  Score=55.13  Aligned_cols=79  Identities=24%  Similarity=0.265  Sum_probs=54.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc----EEE--cCCCCCCccHHHHHHhhc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT----EFV--NSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~----~vv--~~~~~~~~~~~~~i~~~~  269 (362)
                      +|+++||+|+ +++|++.++.+...|+ +|+.+++++++++.+.    +.+..    ..+  |-.+  ++++.+.+.+..
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~   79 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE--ASGQDDIINTTL   79 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCC--HHHHHHHHHHHH
Confidence            4789999998 9999999999999999 9999999998876543    33321    122  2222  233333333332


Q ss_pred             C--CCccEEEEcCCC
Q 018022          270 D--GGADYCFECVGL  282 (362)
Q Consensus       270 ~--~g~d~vid~~g~  282 (362)
                      .  |.+|+++++.|.
T Consensus        80 ~~~G~iDilVnnAG~   94 (274)
T d1xhla_          80 AKFGKIDILVNNAGA   94 (274)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHcCCceEEEeeccc
Confidence            2  379999999874

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.04  E-value=0.0023  Score=56.55  Aligned_cols=103  Identities=19%  Similarity=0.255  Sum_probs=67.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc---------hHHHHH----HhcCCcEEEcCCCCCCccHHHHHH
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS---------EKFEIG----KRFGVTEFVNSKNCGDKSVSQIII  266 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~---------~~~~~~----~~~g~~~vv~~~~~~~~~~~~~i~  266 (362)
                      +|.++||+|+ +++|++.++.+...|+ +|++.+++.         ++++.+    ...+.....+..+  .++..+.+.
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~v~   82 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS--VEAGEKLVK   82 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC--GGGHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccch--HHHHHHHHH
Confidence            4789999998 9999999999999999 899886543         233222    2334444555444  233333333


Q ss_pred             hhc--CCCccEEEEcCCCH-------------------------HHHHHHHHHhccC-CceEEEEccC
Q 018022          267 DMT--DGGADYCFECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGVD  306 (362)
Q Consensus       267 ~~~--~~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~~  306 (362)
                      +..  -|++|++|++.|..                         ...+.++..|+.. +|+|++++..
T Consensus        83 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~  150 (302)
T d1gz6a_          83 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASA  150 (302)
T ss_dssp             HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             HHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCCh
Confidence            322  23799999998862                         2345667777542 3899999753

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.04  E-value=0.0018  Score=56.16  Aligned_cols=104  Identities=21%  Similarity=0.242  Sum_probs=69.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc-hHHH----HHHhcCCcEEEc-CCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFE----IGKRFGVTEFVN-SKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~-~~~~----~~~~~g~~~vv~-~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.++++. +.++    .+++.+.+.... .+-.+++++.+.+.+...  +
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   95 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG   95 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC
Confidence            4789999998 9999999999999999 888887664 3333    334556544322 222112344444443322  3


Q ss_pred             CccEEEEcCCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          272 GADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       272 g~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      ++|+++.+.|..                         ...+.+...|..+ |+++.++..
T Consensus        96 ~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-g~~i~i~s~  154 (272)
T d1g0oa_          96 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSI  154 (272)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCG
T ss_pred             CCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc-ccccccccc
Confidence            789999988863                         2356778888887 998888643

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.03  E-value=0.001  Score=57.75  Aligned_cols=105  Identities=21%  Similarity=0.246  Sum_probs=68.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcC---CcEEEcCCCCCCccHHHHHHhhcC--CCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG---VTEFVNSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g---~~~vv~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      +|.++||+|+ +++|++.++.+...|+ +|+.+++++++++.+. +++   ....+.-+-.+++++.+.+.+...  +.+
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   83 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            5789999998 9999999999999999 9999999998877654 333   222232211012333333333322  379


Q ss_pred             cEEEEcCCCH---------------------------HHHHHHHHHhccC-CceEEEEccC
Q 018022          274 DYCFECVGLA---------------------------SLVQEAYACCRKG-WGKTIVLGVD  306 (362)
Q Consensus       274 d~vid~~g~~---------------------------~~~~~~~~~l~~~-~G~iv~~G~~  306 (362)
                      |++|++.|..                           ...+.+++.|.+. +|+++.++..
T Consensus        84 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~  144 (268)
T d2bgka1          84 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASI  144 (268)
T ss_dssp             CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCG
T ss_pred             ceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccc
Confidence            9999988841                           2344566676432 3788888643

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.03  E-value=0.0024  Score=51.05  Aligned_cols=97  Identities=8%  Similarity=-0.042  Sum_probs=63.8

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      +.+|+|+|+|.+|..+++.+...|+ .|++++++.++.+.+.+-.....+....   ............ ..|.++.+++
T Consensus         2 ~K~IliiGaG~~G~~~a~~L~~~g~-~V~v~dr~~~~a~~l~~~~~~~~~~~~~---~~~~~~~~~~i~-~~~~~i~~~~   76 (182)
T d1e5qa1           2 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLD---VNDDAALDAEVA-KHDLVISLIP   76 (182)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESCHHHHHHHHTTCTTEEEEECC---TTCHHHHHHHHT-TSSEEEECSC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECChHHHHHHHhccccccccccc---ccchhhhHhhhh-ccceeEeecc
Confidence            5789999999999999999999999 8999999999998876533222222222   111111111111 4788888887


Q ss_pred             CHHHHHHHHHHhccCCceEEEEc
Q 018022          282 LASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       282 ~~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      ..........++..+ -.++...
T Consensus        77 ~~~~~~~~~~~~~~~-~~~~~~~   98 (182)
T d1e5qa1          77 YTFHATVIKSAIRQK-KHVVTTS   98 (182)
T ss_dssp             GGGHHHHHHHHHHHT-CEEECSS
T ss_pred             chhhhHHHHHHHhhc-cceeecc
Confidence            766455555556664 5555544

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.00  E-value=0.001  Score=57.82  Aligned_cols=102  Identities=18%  Similarity=0.273  Sum_probs=74.8

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCC-EEEEEcCCchHHHHHHh----cCCc-EEEcCCCCCCccHHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIII  266 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~~i~  266 (362)
                      +...+++++|++||=.|+|. |..+..+|+..+.. +|++++.+++..+.+++    +|.. .+....    .++    .
T Consensus        95 Ii~~l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~----~d~----~  165 (266)
T d1o54a_          95 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKV----RDI----S  165 (266)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEEC----CCG----G
T ss_pred             HHHhhCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEe----ccc----c
Confidence            56789999999999999877 77788889887632 99999999998888764    4542 221111    111    1


Q ss_pred             hhcCC-CccEEEEcCCCH-HHHHHHHHHhccCCceEEEEc
Q 018022          267 DMTDG-GADYCFECVGLA-SLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       267 ~~~~~-g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      +.... .+|.|+--.+.+ ..++.+.+.|+++ |+++.+.
T Consensus       166 ~~~~~~~~D~V~~d~p~p~~~l~~~~~~LKpG-G~lv~~~  204 (266)
T d1o54a_         166 EGFDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVC  204 (266)
T ss_dssp             GCCSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccccceeeeEecCCCHHHHHHHHHhhcCCC-CEEEEEe
Confidence            12223 689888877766 5678999999998 9999874

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=97.00  E-value=0.0026  Score=54.27  Aligned_cols=102  Identities=20%  Similarity=0.286  Sum_probs=70.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCcEE-E--cCCCCCCccHHHHHHhhcC--CCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEF-V--NSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~~v-v--~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      .|.++||+|+ +++|.+.++-+...|+ +|+.++++.++++.+ ++++.... +  |-.+  +++..+.+.+...  +++
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~--~~~i~~~~~~i~~~~g~i   80 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSD--PKAVEAVFAEALEEFGRL   80 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTS--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCceEEEEecCCC--HHHHHHHHHHHHHHhCCc
Confidence            5789999998 9999999999999999 999999999887664 45675432 2  2222  2333333333322  379


Q ss_pred             cEEEEcCCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          274 DYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       274 d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      |++|.+.|..                         ...+..+..++.+ +.++.++..
T Consensus        81 DiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~-~~i~~~ss~  137 (241)
T d2a4ka1          81 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG-GSLVLTGSV  137 (241)
T ss_dssp             CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT-CEEEEECCC
T ss_pred             cEeccccccccccchhhhhccccccccccccccccccccccccccccc-cceeecccc
Confidence            9999988753                         1244566777776 777777654

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.00  E-value=0.00015  Score=61.97  Aligned_cols=98  Identities=17%  Similarity=0.212  Sum_probs=62.6

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCC---ccHHHHHHhhc-CCCccEE
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGD---KSVSQIIIDMT-DGGADYC  276 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~~~~i~~~~-~~g~d~v  276 (362)
                      ..+|||+|+ +++|.+.++.+...|+ +|+.+++++++...     ....+..+.+..   ....+.+.... .+.+|++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l   75 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQAD-----SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   75 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTSS-----EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchhccc-----ccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence            357899998 9999999999999999 99999987654211     111111111000   11122222222 3479999


Q ss_pred             EEcCCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022          277 FECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       277 id~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      |++.|..                          ...+..+..|+++ |+|++++..
T Consensus        76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~Iv~isS~  130 (235)
T d1ooea_          76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG-GLLQLTGAA  130 (235)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred             EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc-eEEEEeccH
Confidence            9998841                          1244667778887 999999754

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.96  E-value=0.0028  Score=51.09  Aligned_cols=88  Identities=17%  Similarity=0.169  Sum_probs=60.6

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCC-------CCccHHHHHHhhcCCCccE
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC-------GDKSVSQIIIDMTDGGADY  275 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~-------~~~~~~~~i~~~~~~g~d~  275 (362)
                      .++.|+|+|.+|++.+..+...|+ .|++.++++++.+.+++.+..........       ...+..+.+.     .+|+
T Consensus         2 k~iaIiGaG~~G~~~A~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-----~aD~   75 (184)
T d1bg6a2           2 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVK-----DADV   75 (184)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHT-----TCSE
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhc-----CCCE
Confidence            589999999999999999999999 99999999999998887654222111000       0012333332     5899


Q ss_pred             EEEcCCCHH---HHHHHHHHhccC
Q 018022          276 CFECVGLAS---LVQEAYACCRKG  296 (362)
Q Consensus       276 vid~~g~~~---~~~~~~~~l~~~  296 (362)
                      +|-++....   .++++...+.++
T Consensus        76 iii~v~~~~~~~~~~~i~~~l~~~   99 (184)
T d1bg6a2          76 ILIVVPAIHHASIAANIASYISEG   99 (184)
T ss_dssp             EEECSCGGGHHHHHHHHGGGCCTT
T ss_pred             EEEEEchhHHHHHHHHhhhccCCC
Confidence            999998764   234455555554

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=96.96  E-value=0.00024  Score=60.30  Aligned_cols=99  Identities=14%  Similarity=0.244  Sum_probs=70.3

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc----CCcEEEcCCCCCCccHHHHHHhh
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~~i~~~  268 (362)
                      +.+.+++++|++||-+|+|. |..++.+|+.. . +|++++.+++..+.+++.    ....++..+.  ...+    .  
T Consensus        62 ml~~L~l~~g~~VLdIG~Gs-Gy~ta~La~l~-~-~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~--~~g~----~--  130 (224)
T d1vbfa_          62 MLDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILGDG--TLGY----E--  130 (224)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEESCG--GGCC----G--
T ss_pred             HHHHhhhcccceEEEecCCC-CHHHHHHHHHh-c-ccccccccHHHHHHHHHHHhcccccccccCch--hhcc----h--
Confidence            45778999999999999874 77777788764 4 899999999988887763    1122332221  0111    0  


Q ss_pred             cCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 018022          269 TDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       269 ~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  303 (362)
                      ..+.||.|+-+.+.+.....+++.|+++ |+++..
T Consensus       131 ~~~pfD~Iiv~~a~~~ip~~l~~qLk~G-GrLV~p  164 (224)
T d1vbfa_         131 EEKPYDRVVVWATAPTLLCKPYEQLKEG-GIMILP  164 (224)
T ss_dssp             GGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             hhhhHHHHHhhcchhhhhHHHHHhcCCC-CEEEEE
Confidence            1136999998777666556788999998 999875

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.94  E-value=0.00057  Score=58.44  Aligned_cols=100  Identities=20%  Similarity=0.250  Sum_probs=65.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcC--CCccEEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTD--GGADYCF  277 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~--~g~d~vi  277 (362)
                      .|+++||+|+ +++|++.++.+...|+ +|+++++++++.+.+..    ...|-.+  ++++.+.+.+...  +++|+++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~----~~~Dv~~--~~~v~~~~~~~~~~~g~iDiLV   78 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLFG----VEVDVTD--SDAVDRAFTAVEEHQGPVEVLV   78 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSEE----EECCTTC--HHHHHHHHHHHHHHHSSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchhcCceE----EEEecCC--HHHHHHHHHHHHHhcCCceEEE
Confidence            5789999998 9999999999999999 99999998776543221    1223222  1333333333222  2799999


Q ss_pred             EcCCCH-------------------------HHHHHHHHHhccC-CceEEEEccCC
Q 018022          278 ECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGVDQ  307 (362)
Q Consensus       278 d~~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~~~  307 (362)
                      +++|..                         ...+.++..|+.. +|+|++++...
T Consensus        79 nnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~  134 (237)
T d1uzma1          79 SNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVS  134 (237)
T ss_dssp             EECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred             eeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchh
Confidence            998852                         1233445555443 37999997643

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.0015  Score=56.86  Aligned_cols=99  Identities=19%  Similarity=0.286  Sum_probs=64.5

Q ss_pred             CCEE-EEECC-ChHHHHHHH-HHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEE--cCCCCCCccH---HHHHHhh
Q 018022          202 GSTV-VIFGL-GSIGLAVAE-GARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSV---SQIIIDM  268 (362)
Q Consensus       202 g~~v-lI~Ga-g~~G~~a~~-la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv--~~~~~~~~~~---~~~i~~~  268 (362)
                      |.+| ||+|+ +++|+++++ +++..|. +|+.++++.++++.+.    +.+.. +++  |-.+  .++.   .+.+.+.
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~--~~sv~~~~~~~~~~   78 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD--LQSIRALRDFLRKE   78 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCC--HHHHHHHHHHHHHh
Confidence            5666 67788 999999776 4555688 9999999999876543    23432 222  2222  1222   2333332


Q ss_pred             cCCCccEEEEcCCCH-------------------------HHHHHHHHHhccCCceEEEEcc
Q 018022          269 TDGGADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       269 ~~~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      . +.+|++|+..|..                         ...+.++..|+++ |+++.++.
T Consensus        79 ~-g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-g~ivnisS  138 (275)
T d1wmaa1          79 Y-GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ-GRVVNVSS  138 (275)
T ss_dssp             H-SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECC
T ss_pred             c-CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccccc
Confidence            2 3799999999852                         2345667788887 99999875

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.93  E-value=0.0019  Score=51.28  Aligned_cols=110  Identities=19%  Similarity=0.266  Sum_probs=80.7

Q ss_pred             HHHHhcC-CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcC
Q 018022          192 AAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       192 ~l~~~~~-~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~  270 (362)
                      ++.+..+ +=.|.+++|.|=|-+|.-.++-++.+|+ +|++++.++-+.=.+.--|+. |.        .+.+.+.    
T Consensus        12 ~i~r~t~~~laGk~vvV~GYG~vGrG~A~~~rg~Ga-~V~V~E~DPi~alqA~mdGf~-v~--------~~~~a~~----   77 (163)
T d1v8ba1          12 GLMRATDFLISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-VV--------TLDEIVD----   77 (163)
T ss_dssp             HHHHHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-EC--------CHHHHTT----
T ss_pred             HHHHHhCceecCCEEEEecccccchhHHHHHHhCCC-EEEEEecCchhhHHHHhcCCc-cC--------chhHccc----
Confidence            3444444 4689999999999999999999999999 999999988665555444543 22        2333322    


Q ss_pred             CCccEEEEcCCCHHHH-HHHHHHhccCCceEEEEccCCCCCccccCHHHHHh
Q 018022          271 GGADYCFECVGLASLV-QEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLH  321 (362)
Q Consensus       271 ~g~d~vid~~g~~~~~-~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~  321 (362)
                       ..|+++-++|....+ .+-++.|+++ ..+...|.    .+.+++...+..
T Consensus        78 -~aDi~vTaTGn~~vI~~~h~~~MKdg-aIl~N~GH----fd~EIdv~~L~~  123 (163)
T d1v8ba1          78 -KGDFFITCTGNVDVIKLEHLLKMKNN-AVVGNIGH----FDDEIQVNELFN  123 (163)
T ss_dssp             -TCSEEEECCSSSSSBCHHHHTTCCTT-CEEEECSS----TTTSBCHHHHHT
T ss_pred             -cCcEEEEcCCCCccccHHHHHHhhCC-eEEEeccc----cchhhhhHHHHh
Confidence             489999999998754 4778999996 77777775    356777766643

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00095  Score=56.48  Aligned_cols=95  Identities=22%  Similarity=0.281  Sum_probs=67.4

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHcCCC-EEEEEcCCchHHHHHHh----cCC-------cEEEcCCCCCCccHHHHH
Q 018022          198 NVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKR----FGV-------TEFVNSKNCGDKSVSQII  265 (362)
Q Consensus       198 ~~~~g~~vlI~Gag~~G~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~----~g~-------~~vv~~~~~~~~~~~~~i  265 (362)
                      .+++|++||-+|+|. |..++.+|+..|.. +|++++.+++-.+.+++    .+.       ..++..+.      ..  
T Consensus        73 ~l~~g~~VLdiG~Gs-Gy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~------~~--  143 (224)
T d1i1na_          73 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDG------RM--  143 (224)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCG------GG--
T ss_pred             ccCCCCeEEEecCCC-CHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeec------cc--
Confidence            789999999999976 88888889887633 99999999987776643    222       12222111      00  


Q ss_pred             Hhhc-CCCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 018022          266 IDMT-DGGADYCFECVGLASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       266 ~~~~-~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  303 (362)
                       ... .+.||+|+.+.......+.+++.|+++ |+++..
T Consensus       144 -~~~~~~~fD~I~~~~~~~~ip~~l~~~LkpG-G~LV~p  180 (224)
T d1i1na_         144 -GYAEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILP  180 (224)
T ss_dssp             -CCGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             -ccchhhhhhhhhhhcchhhcCHHHHhhcCCC-cEEEEE
Confidence             011 126999998887766557889999998 999874

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.92  E-value=0.0019  Score=55.75  Aligned_cols=103  Identities=21%  Similarity=0.348  Sum_probs=67.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEE-cCCchHHHH----HHhcCCcEE-EcCCCCCCccHHHHHHhhcC--C
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFEI----GKRFGVTEF-VNSKNCGDKSVSQIIIDMTD--G  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~-~~~~~~~~~----~~~~g~~~v-v~~~~~~~~~~~~~i~~~~~--~  271 (362)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+ .++++..+.    +++.|.... +..+-.+.++..+.+.+...  +
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G~-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   83 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcC
Confidence            5889999988 9999999999999999 77765 455554443    345665432 22222112333333333322  2


Q ss_pred             CccEEEEcCCCH-------------------------HHHHHHHHHhccCCceEEEEcc
Q 018022          272 GADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       272 g~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ++|++|.+.|..                         ...+.++..|+++ |.++.+..
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~~iii~s  141 (259)
T d1ja9a_          84 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSS  141 (259)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC-Cccccccc
Confidence            799999999863                         2456778888886 88877754

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.88  E-value=0.0058  Score=48.46  Aligned_cols=109  Identities=16%  Similarity=0.121  Sum_probs=72.5

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCH
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  283 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~  283 (362)
                      +|-|+|.|.+|...+.-+...|+ .|++.++++++.+.+++.+....        .+..+.++     ..|++|-|+..+
T Consensus         2 kIgiIGlG~MG~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~~--------~~~~e~~~-----~~d~ii~~v~~~   67 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAETA--------STAKAIAE-----QCDVIITMLPNS   67 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC--------SSHHHHHH-----HCSEEEECCSSH
T ss_pred             EEEEEehhHHHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHhhhhhc--------ccHHHHHh-----CCCeEEEEcCCH
Confidence            57889999999998888888999 99999999999999988876421        22333333     378999999877


Q ss_pred             HHHHHH-------HHHhccCCceEEEEccCCCCCccccCHH-HHHhcCcEEEEe
Q 018022          284 SLVQEA-------YACCRKGWGKTIVLGVDQPGSQLSLSSF-EVLHSGKILMGS  329 (362)
Q Consensus       284 ~~~~~~-------~~~l~~~~G~iv~~G~~~~~~~~~~~~~-~~~~~~~~i~g~  329 (362)
                      ..++..       ...++++ ..++.++...  ........ .+..+++++...
T Consensus        68 ~~v~~v~~~~~~~~~~~~~g-~iiid~sT~~--p~~~~~~~~~~~~~g~~~vda  118 (161)
T d1vpda2          68 PHVKEVALGENGIIEGAKPG-TVLIDMSSIA--PLASREISDALKAKGVEMLDA  118 (161)
T ss_dssp             HHHHHHHHSTTCHHHHCCTT-CEEEECSCCC--HHHHHHHHHHHHTTTCEEEEC
T ss_pred             HHHHHHHhCCcchhhccCCC-CEEEECCCCC--HHHHHHHHHHHHHcCCceecc
Confidence            655554       3445564 5566665432  12222333 233446666544

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.86  E-value=0.0037  Score=50.15  Aligned_cols=72  Identities=10%  Similarity=0.108  Sum_probs=52.6

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cC---CcEEEcCCCCCCccHHHHHHhhcCCCcc
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FG---VTEFVNSKNCGDKSVSQIIIDMTDGGAD  274 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g---~~~vv~~~~~~~~~~~~~i~~~~~~g~d  274 (362)
                      ..+|.+|||+|+|+.+.+++..+..+|. +|+++.|+.+|.+.+.+ +.   ....+..++            .....+|
T Consensus        15 ~~~~k~vlIlGaGGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~------------~~~~~~d   81 (170)
T d1nyta1          15 IRPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSMDE------------LEGHEFD   81 (170)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCSGG------------GTTCCCS
T ss_pred             CCCCCEEEEECCcHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhccccccccccc------------ccccccc
Confidence            3578899999999999999999999999 79999999988776543 32   222222211            1112689


Q ss_pred             EEEEcCCCH
Q 018022          275 YCFECVGLA  283 (362)
Q Consensus       275 ~vid~~g~~  283 (362)
                      ++|+|+...
T Consensus        82 liIN~Tp~G   90 (170)
T d1nyta1          82 LIINATSSG   90 (170)
T ss_dssp             EEEECCSCG
T ss_pred             eeecccccC
Confidence            999998754

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.86  E-value=0.0034  Score=51.05  Aligned_cols=96  Identities=15%  Similarity=0.162  Sum_probs=61.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hc----CC-cEEEcCCCCCCccHHHHHHhhcCC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RF----GV-TEFVNSKNCGDKSVSQIIIDMTDG  271 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~----g~-~~vv~~~~~~~~~~~~~i~~~~~~  271 (362)
                      .+.+|+|+|+|+.+.+++..+...|++.++.+.|+.++.+.+.    ++    .. ..+.+..+  ..++.+.+.     
T Consensus        17 ~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-----   89 (182)
T d1vi2a1          17 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLAD--QQAFAEALA-----   89 (182)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC--HHHHHHHHH-----
T ss_pred             CCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeeccc--ccchhhhhc-----
Confidence            6789999999999999999999999999999999887655432    22    21 22344433  112222221     


Q ss_pred             CccEEEEcCCCHHH------HHHHHHHhccCCceEEEEc
Q 018022          272 GADYCFECVGLASL------VQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       272 g~d~vid~~g~~~~------~~~~~~~l~~~~G~iv~~G  304 (362)
                      .+|++|+|++....      +..-...++++ ..++.+-
T Consensus        90 ~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~-~~v~Di~  127 (182)
T d1vi2a1          90 SADILTNGTKVGMKPLENESLVNDISLLHPG-LLVTECV  127 (182)
T ss_dssp             TCSEEEECSSTTSTTSCSCCSCCCGGGSCTT-CEEEECC
T ss_pred             ccceeccccCCccccccchhhhhHHHhhhcc-hhhHHhh
Confidence            48999999874320      11113456665 6666664

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.85  E-value=0.0031  Score=51.05  Aligned_cols=101  Identities=16%  Similarity=0.162  Sum_probs=67.1

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc-CCc-----------------EEEcCC
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVT-----------------EFVNSK  254 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-g~~-----------------~vv~~~  254 (362)
                      .+....+++|.+||..|+|. |..+..+|+ .|+ .|+++|.+++-++.+++. +..                 .++..+
T Consensus        12 ~~~~l~~~~~~rvLd~GCG~-G~~a~~la~-~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d   88 (201)
T d1pjza_          12 YWSSLNVVPGARVLVPLCGK-SQDMSWLSG-QGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGD   88 (201)
T ss_dssp             HHHHHCCCTTCEEEETTTCC-SHHHHHHHH-HCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEEC
T ss_pred             HHHHcCCCCCCEEEEecCcC-CHHHHHHHH-cCC-ceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccc
Confidence            35667899999999999976 777888886 499 999999999999888762 111                 111111


Q ss_pred             CCCCccHHHHHHhhcCCCccEEEEcCCC--------HHHHHHHHHHhccCCceEEEEc
Q 018022          255 NCGDKSVSQIIIDMTDGGADYCFECVGL--------ASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       255 ~~~~~~~~~~i~~~~~~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      -   .++.....    ..+|.|++...-        ...++.+.+.|+++ |++++..
T Consensus        89 ~---~~l~~~~~----~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~Lkpg-G~l~l~~  138 (201)
T d1pjza_          89 F---FALTARDI----GHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLIT  138 (201)
T ss_dssp             C---SSSTHHHH----HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEEE
T ss_pred             c---cccccccc----cceeEEEEEeeeEecchhhhHHHHHHHHHhcCCC-cEEEEEE
Confidence            0   11111111    158999885442        24467889999998 9876543

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.82  E-value=0.0033  Score=54.33  Aligned_cols=102  Identities=19%  Similarity=0.237  Sum_probs=73.8

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCC-EEEEEcCCchHHHHHHh----c--C-CcE--EEcCCCCCCccHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKR----F--G-VTE--FVNSKNCGDKSVS  262 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~----~--g-~~~--vv~~~~~~~~~~~  262 (362)
                      +...++++||++||=.|+|. |.++..+|+..|.+ +|+.++.+++.++.+++    +  + .+.  ++..      +..
T Consensus        88 Ii~~l~i~PG~~VLE~G~Gs-G~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~------d~~  160 (264)
T d1i9ga_          88 IVHEGDIFPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS------DLA  160 (264)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS------CGG
T ss_pred             HHHHhCCCCCCEEEecCcCC-cHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEec------ccc
Confidence            56789999999999999876 88888899987643 99999999999888865    1  1 122  2221      111


Q ss_pred             HHHHhhcCCCccEEEEcCCCH-HHHHHHHHHhccCCceEEEEc
Q 018022          263 QIIIDMTDGGADYCFECVGLA-SLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       263 ~~i~~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      +  ..+..+.||.||--...+ ..+..+.+.|+++ |+++.+-
T Consensus       161 ~--~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpG-G~lv~~~  200 (264)
T d1i9ga_         161 D--SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYV  200 (264)
T ss_dssp             G--CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred             c--ccccCCCcceEEEecCCHHHHHHHHHhccCCC-CEEEEEe
Confidence            1  011223799888767765 5578999999998 9999874

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.81  E-value=0.0067  Score=48.33  Aligned_cols=90  Identities=20%  Similarity=0.286  Sum_probs=62.4

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCC-EEEEEcCCchHHHHHHhcCC-cEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      +|+|+|+|.+|...+..++..|.. +|++.+++.+.++.+++.+. +++....+    .       ......|+||-|+.
T Consensus         3 ~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~----~-------~~~~~~dlIila~p   71 (171)
T d2g5ca2           3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIA----K-------VEDFSPDFVMLSSP   71 (171)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGG----G-------GGGTCCSEEEECSC
T ss_pred             EEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhh----h-------hhccccccccccCC
Confidence            689999999999999888888853 89999999999999999885 44443222    0       01114678887777


Q ss_pred             CHH---HHHHHHHHhccCCceEEEEcc
Q 018022          282 LAS---LVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       282 ~~~---~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ...   .+..+.+.+.++ ..++.++.
T Consensus        72 ~~~~~~vl~~l~~~~~~~-~ii~d~~s   97 (171)
T d2g5ca2          72 VRTFREIAKKLSYILSED-ATVTDQGS   97 (171)
T ss_dssp             HHHHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred             chhhhhhhhhhhcccccc-cccccccc
Confidence            543   234455556664 55555554

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.76  E-value=0.011  Score=45.11  Aligned_cols=75  Identities=17%  Similarity=0.271  Sum_probs=56.6

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  282 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~  282 (362)
                      +|+|.|.|.+|...++.+...|. .|++++.++++.+.+++ ++.. ++..+.    .-.+.+.+..-..+|.++-+++.
T Consensus         2 ~IvI~G~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~~~~~-vi~Gd~----~~~~~l~~~~i~~a~~vv~~t~~   75 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDAL-VINGDC----TKIKTLEDAGIEDADMYIAVTGK   75 (132)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSE-EEESCT----TSHHHHHHTTTTTCSEEEECCSC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-CcceecCChhhhhhhhhhhhhh-hccCcc----cchhhhhhcChhhhhhhcccCCc
Confidence            58999999999999999999999 99999999999888764 5654 443322    12334444422379999999998


Q ss_pred             HH
Q 018022          283 AS  284 (362)
Q Consensus       283 ~~  284 (362)
                      ..
T Consensus        76 d~   77 (132)
T d1lssa_          76 EE   77 (132)
T ss_dssp             HH
T ss_pred             HH
Confidence            74

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.68  E-value=0.0032  Score=55.09  Aligned_cols=81  Identities=11%  Similarity=0.108  Sum_probs=54.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-----HhcCCcE-EEcCCCCCCccHHHHHHhhc--CC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-----KRFGVTE-FVNSKNCGDKSVSQIIIDMT--DG  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-----~~~g~~~-vv~~~~~~~~~~~~~i~~~~--~~  271 (362)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.++++.++++.+     ++.|... .+..+-.+.+.+.+.+....  .+
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  102 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence            5789999997 9999999999999999 999999998876543     2334433 33222101122222222222  23


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ++|+++.+.|.
T Consensus       103 ~iDilvnnAg~  113 (294)
T d1w6ua_         103 HPNIVINNAAG  113 (294)
T ss_dssp             SCSEEEECCCC
T ss_pred             ccchhhhhhhh
Confidence            79999999885

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=96.64  E-value=0.0012  Score=56.26  Aligned_cols=101  Identities=22%  Similarity=0.276  Sum_probs=71.0

Q ss_pred             HHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc---EEEcCCCCCCccHHH
Q 018022          191 GAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQ  263 (362)
Q Consensus       191 ~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~~  263 (362)
                      ..+...+++++|++||=+|+|. |..+..+++..|+ +|++++.+++-.+.+++    .|..   +++..+-   .++  
T Consensus        23 ~~l~~~~~l~pg~~VLDiGCG~-G~~~~~la~~~~~-~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~---~~~--   95 (245)
T d1nkva_          23 ATLGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDA---AGY--   95 (245)
T ss_dssp             HHHHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCC---TTC--
T ss_pred             HHHHHHcCCCCCCEEEEEcCCC-CHHHHHHHHhcCC-EEEEEecccchhhHHHHHHHHhhccccchhhhhHH---hhc--
Confidence            3456889999999999999866 5667778888898 99999999887776654    4542   2332221   111  


Q ss_pred             HHHhhcCCCccEEEEcC------CCHHHHHHHHHHhccCCceEEEE
Q 018022          264 IIIDMTDGGADYCFECV------GLASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       264 ~i~~~~~~g~d~vid~~------g~~~~~~~~~~~l~~~~G~iv~~  303 (362)
                          ..++.||.|+-.-      .-...+..+.+.|+|+ |++++.
T Consensus        96 ----~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPG-G~l~i~  136 (245)
T d1nkva_          96 ----VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIG  136 (245)
T ss_dssp             ----CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEE
T ss_pred             ----cccCceeEEEEEehhhccCCHHHHHHHHHHHcCcC-cEEEEE
Confidence                1223799988532      2346688899999998 998875

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.63  E-value=0.016  Score=49.41  Aligned_cols=76  Identities=18%  Similarity=0.184  Sum_probs=51.8

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCcEE-E--cCCCCCCccHHHHHHhhcC--CCc
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEF-V--NSKNCGDKSVSQIIIDMTD--GGA  273 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~~v-v--~~~~~~~~~~~~~i~~~~~--~g~  273 (362)
                      .+||+|+ +++|++.++.+...|+ +|+.+++++++++.+    ++.|.... +  |-.+  ++++.+.+.+...  +++
T Consensus         3 ValITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   79 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD--RDQVFAAVEQARKTLGGF   79 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHHTTCC
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHHhCCc
Confidence            4689988 9999999999999999 999999999887654    34454332 2  2222  2333333333321  379


Q ss_pred             cEEEEcCCC
Q 018022          274 DYCFECVGL  282 (362)
Q Consensus       274 d~vid~~g~  282 (362)
                      |+++++.|.
T Consensus        80 DilVnnAG~   88 (255)
T d1gega_          80 DVIVNNAGV   88 (255)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEecccc
Confidence            999999885

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=96.63  E-value=0.0049  Score=52.38  Aligned_cols=101  Identities=16%  Similarity=0.166  Sum_probs=65.4

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCC------EEEEEcCCchHHHHHH----hcCCcE-EE--cCCCCCCccHHHHHHhhc
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGAT------RIIGVDVISEKFEIGK----RFGVTE-FV--NSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~------~vi~~~~~~~~~~~~~----~~g~~~-vv--~~~~~~~~~~~~~i~~~~  269 (362)
                      .|||+|+ +++|++.+..+...|++      .|+..+++.++++.+.    +.|... .+  |-.+  .+++.+.+.+..
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~--~~~v~~~~~~~~   80 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISD--MADVRRLTTHIV   80 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHH
Confidence            5789998 99999999888888883      3889999988876553    345432 22  2222  233333333322


Q ss_pred             --CCCccEEEEcCCCH-------------------------HHHHHHHHHhccC-CceEEEEccC
Q 018022          270 --DGGADYCFECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGVD  306 (362)
Q Consensus       270 --~~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~~  306 (362)
                        -|.+|+++++.|..                         ...+.++..|++. +|+++.++..
T Consensus        81 ~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~  145 (240)
T d2bd0a1          81 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSV  145 (240)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             HHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEech
Confidence              23799999998862                         2345566777542 3899999754

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.61  E-value=0.0011  Score=56.87  Aligned_cols=79  Identities=20%  Similarity=0.187  Sum_probs=54.7

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCC-EEEEEcCCchHHHHHHhcCC-c-EEE--cCCCCCCcc---HHHHHHhhcCC-
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKRFGV-T-EFV--NSKNCGDKS---VSQIIIDMTDG-  271 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~~g~-~-~vv--~~~~~~~~~---~~~~i~~~~~~-  271 (362)
                      ..+|||+|+ +++|++.++.+...|+. .|+.+.++.++++.+++... . +++  |-.+  .++   +.+.+.+..+. 
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~--~~~v~~~~~~i~~~~~~~   80 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTC--DKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTC--HHHHHHHHHHHHHHHGGG
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCC--HHHHHHHHHHHHHHhCCC
Confidence            478999998 99999999888888863 79999999999888876432 2 222  2222  122   33344443344 


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      +.|++|.+.|.
T Consensus        81 ~idilinnAG~   91 (250)
T d1yo6a1          81 GLSLLINNAGV   91 (250)
T ss_dssp             CCCEEEECCCC
T ss_pred             CeEEEEEcCcc
Confidence            69999999985

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.61  E-value=0.0036  Score=55.09  Aligned_cols=79  Identities=16%  Similarity=0.282  Sum_probs=54.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hc--------CCcEE-E--cCCCCCCccHHHHHHh
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF--------GVTEF-V--NSKNCGDKSVSQIIID  267 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~--------g~~~v-v--~~~~~~~~~~~~~i~~  267 (362)
                      +|.++||+|+ +++|++.++.+...|+ +|++++++.++++.+. ++        +...+ +  |-.+  ++++.+.+.+
T Consensus        11 ~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~~   87 (297)
T d1yxma1          11 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN--EEEVNNLVKS   87 (297)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC--HHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCC--HHHHHHHHHH
Confidence            6899999998 9999999999999999 9999999988875542 22        22221 2  2222  2333333333


Q ss_pred             hcC--CCccEEEEcCCC
Q 018022          268 MTD--GGADYCFECVGL  282 (362)
Q Consensus       268 ~~~--~g~d~vid~~g~  282 (362)
                      ...  +++|++|++.|.
T Consensus        88 ~~~~~G~iDiLVnnAg~  104 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGG  104 (297)
T ss_dssp             HHHHHSCCCEEEECCCC
T ss_pred             HHHHhCCeEEEEeeccc
Confidence            322  379999999885

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.58  E-value=0.0059  Score=53.51  Aligned_cols=103  Identities=15%  Similarity=0.216  Sum_probs=70.6

Q ss_pred             HHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcEEEcCCCCCCccHHHHHHh
Q 018022          192 AAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIID  267 (362)
Q Consensus       192 ~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~vv~~~~~~~~~~~~~i~~  267 (362)
                      .+.+.+++++|++||=+|+|- |..+..+|+..|+ +|++++.+++..+.++    +.|....+....   .+.     .
T Consensus        52 ~~~~~l~l~~G~~VLDiGCG~-G~~~~~~a~~~g~-~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~---~d~-----~  121 (291)
T d1kpia_          52 LALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI---QGW-----E  121 (291)
T ss_dssp             HHHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHSCCSSCEEEEE---CCG-----G
T ss_pred             HHHHhcCCCCCCEEEEecCcc-hHHHHHHHHhcCc-ceeeccchHHHHHHHHHHHHhhccchhhhhhh---hcc-----c
Confidence            356889999999999999865 4456788888899 9999999998766554    455432221111   111     1


Q ss_pred             hcCCCccEEEE-----cCCC----------HHHHHHHHHHhccCCceEEEEcc
Q 018022          268 MTDGGADYCFE-----CVGL----------ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       268 ~~~~g~d~vid-----~~g~----------~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ..++.||.|+.     .++.          +..++.+.+.|+|+ |++++-..
T Consensus       122 ~~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~Lkpg-G~~~l~~i  173 (291)
T d1kpia_         122 EFDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTI  173 (291)
T ss_dssp             GCCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTT-CEEEEEEE
T ss_pred             ccccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCC-CceEEEEE
Confidence            22347998875     3332          24578899999998 99986543

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.57  E-value=0.0021  Score=53.18  Aligned_cols=96  Identities=17%  Similarity=0.144  Sum_probs=64.8

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .++|+|+|+ |.+|...+..+...|+ +|+++.|+.+++......+.. ++.-+-   .+ .+.+.+... +.|+||.++
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~-~~~gD~---~d-~~~l~~al~-~~d~vi~~~   75 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAH-VVVGDV---LQ-AADVDKTVA-GQDAVIVLL   75 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSE-EEESCT---TS-HHHHHHHHT-TCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEcChhhcccccccccc-cccccc---cc-hhhHHHHhc-CCCEEEEEe
Confidence            468999998 9999999998889999 999999998886555444544 333222   22 233433333 589999999


Q ss_pred             CCH----------HHHHHHHHHhccCCc--eEEEEcc
Q 018022          281 GLA----------SLVQEAYACCRKGWG--KTIVLGV  305 (362)
Q Consensus       281 g~~----------~~~~~~~~~l~~~~G--~iv~~G~  305 (362)
                      |..          .....+++.++.. |  +++.++.
T Consensus        76 g~~~~~~~~~~~~~~~~~l~~aa~~~-~v~r~i~~ss  111 (205)
T d1hdoa_          76 GTRNDLSPTTVMSEGARNIVAAMKAH-GVDKVVACTS  111 (205)
T ss_dssp             CCTTCCSCCCHHHHHHHHHHHHHHHH-TCCEEEEECC
T ss_pred             ccCCchhhhhhhHHHHHHHHHHHHhc-CCCeEEEEee
Confidence            853          1133455566664 4  7777754

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.55  E-value=0.0023  Score=55.59  Aligned_cols=79  Identities=27%  Similarity=0.269  Sum_probs=54.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCC--c--EEE--cCCCCCCccHHHHHHhhc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGV--T--EFV--NSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~--~--~vv--~~~~~~~~~~~~~i~~~~  269 (362)
                      +|+++||+|+ +++|++.++.+...|+ +|+.+++++++++.+.    +.+.  .  ..+  |-.+  ++++.+.+.+..
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~~~~   80 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT--EDGQDQIINSTL   80 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCC--HHHHHHHHHHHH
Confidence            4788999988 9999999999999999 9999999998876653    2332  1  122  2222  233333333332


Q ss_pred             C--CCccEEEEcCCC
Q 018022          270 D--GGADYCFECVGL  282 (362)
Q Consensus       270 ~--~g~d~vid~~g~  282 (362)
                      .  +++|++|++.|.
T Consensus        81 ~~~g~iDilvnnAG~   95 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGA   95 (272)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHhCCceEEEeCCcc
Confidence            2  379999999875

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.55  E-value=0.003  Score=48.41  Aligned_cols=74  Identities=15%  Similarity=0.364  Sum_probs=55.7

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCH
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  283 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~  283 (362)
                      +++|.|.|.+|...++.+...|. .|++++.++++.+.+++.+...++-...  +.+.   +.+..-..+|.+|-+++..
T Consensus         2 ~~iIiG~G~~G~~la~~L~~~g~-~vvvid~d~~~~~~~~~~~~~~~~gd~~--~~~~---l~~a~i~~a~~vi~~~~~~   75 (134)
T d2hmva1           2 QFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVIANAT--EENE---LLSLGIRNFEYVIVAIGAN   75 (134)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHHTTTTCSEEEECCTT--CTTH---HHHHTGGGCSEEEECCCSC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-eEEEecCcHHHHHHHHHhCCcceeeecc--cchh---hhccCCccccEEEEEcCch
Confidence            57888999999999999999999 9999999999999999888755543221  2333   2222111589999888865

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=96.53  E-value=0.0079  Score=51.38  Aligned_cols=85  Identities=16%  Similarity=0.169  Sum_probs=54.3

Q ss_pred             CCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchH-------HHHHHhcCCcEE-EcCCCCCCccHHHHHHhh
Q 018022          198 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-------FEIGKRFGVTEF-VNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       198 ~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~-------~~~~~~~g~~~v-v~~~~~~~~~~~~~i~~~  268 (362)
                      .++|+.++||+|+ +++|++.+..+...|+++|+.+.|+..+       .+.+++.|.... +.-+-.+..++.+.+.++
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i   84 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI   84 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccc
Confidence            5789999999997 9999999999988998668878765322       223345665432 222210112333333333


Q ss_pred             cCC-CccEEEEcCCC
Q 018022          269 TDG-GADYCFECVGL  282 (362)
Q Consensus       269 ~~~-g~d~vid~~g~  282 (362)
                      ... .+|.++.+.|.
T Consensus        85 ~~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          85 GDDVPLSAVFHAAAT   99 (259)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             ccccccccccccccc
Confidence            333 78999998885

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.53  E-value=0.034  Score=40.93  Aligned_cols=93  Identities=12%  Similarity=0.035  Sum_probs=63.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch-HHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~-~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      .|.+|||+|+|.+|..-++.+...|+ .|++++.... ....+.+-+.-..+...- .+.++         .++++|+-+
T Consensus        11 ~~k~vlVvG~G~va~~ka~~ll~~ga-~v~v~~~~~~~~~~~~~~~~~i~~~~~~~-~~~dl---------~~~~lv~~a   79 (113)
T d1pjqa1          11 RDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIPQFTVWANEGMLTLVEGPF-DETLL---------DSCWLAIAA   79 (113)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCHHHHHHHTTTSCEEEESSC-CGGGG---------TTCSEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeccCChHHHHHHhcCCceeeccCC-CHHHh---------CCCcEEeec
Confidence            47899999999999999999999999 7777654432 222222323222332111 01221         268999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEcc
Q 018022          280 VGLASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       280 ~g~~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ++....-.++....++. |.++.+..
T Consensus        80 t~d~~~n~~i~~~a~~~-~ilVNv~D  104 (113)
T d1pjqa1          80 TDDDTVNQRVSDAAESR-RIFCNVVD  104 (113)
T ss_dssp             CSCHHHHHHHHHHHHHT-TCEEEETT
T ss_pred             CCCHHHHHHHHHHHHHc-CCEEEeCC
Confidence            99988556777888887 99998764

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.52  E-value=0.0012  Score=59.04  Aligned_cols=104  Identities=18%  Similarity=0.240  Sum_probs=70.6

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCC-EEEEEcCCchHHHHHHh----cC-----------CcE--EEcCC
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKR----FG-----------VTE--FVNSK  254 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~----~g-----------~~~--vv~~~  254 (362)
                      +...++++||++||=.|+|. |.+++.+|++.|.+ +|+.++.+++..+.+++    ++           .+.  +++.+
T Consensus        90 Il~~l~i~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~d  168 (324)
T d2b25a1          90 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  168 (324)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHHhCCCCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecc
Confidence            45778999999999999876 88888999988754 99999999998888764    11           111  22211


Q ss_pred             CCCCccHHHHHHhhcCCCccEEEEcCCCH-HHHHHHHHHhccCCceEEEEc
Q 018022          255 NCGDKSVSQIIIDMTDGGADYCFECVGLA-SLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       255 ~~~~~~~~~~i~~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      -   .++..   .+..+.+|.||--.+.+ ..+..+.+.|+++ |+++.+-
T Consensus       169 i---~~~~~---~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpG-G~lv~~~  212 (324)
T d2b25a1         169 I---SGATE---DIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYV  212 (324)
T ss_dssp             T---TCCC----------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEE
T ss_pred             h---hhccc---ccCCCCcceEeecCcCHHHHHHHHHHhccCC-CEEEEEe
Confidence            1   11111   11222689888655554 4588999999998 9999874

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.51  E-value=0.0031  Score=54.29  Aligned_cols=79  Identities=23%  Similarity=0.271  Sum_probs=54.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-----HhcCCcE-EE--cCCCCCCccHHHHHHhhc--
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-----KRFGVTE-FV--NSKNCGDKSVSQIIIDMT--  269 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-----~~~g~~~-vv--~~~~~~~~~~~~~i~~~~--  269 (362)
                      .|+++||+|+ +++|++.++.+...|+ +|+.++++.++++.+     ++.|... .+  |-.+  ++++.+.+.+..  
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~   84 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN--TDIVTKTIQQIDAD   84 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHH
Confidence            4789999998 9999999999999999 999999998776433     3345433 22  2222  233333333332  


Q ss_pred             CCCccEEEEcCCC
Q 018022          270 DGGADYCFECVGL  282 (362)
Q Consensus       270 ~~g~d~vid~~g~  282 (362)
                      -+++|++|++.|.
T Consensus        85 ~g~iDilVnnAg~   97 (260)
T d1h5qa_          85 LGPISGLIANAGV   97 (260)
T ss_dssp             SCSEEEEEECCCC
T ss_pred             hCCCcEecccccc
Confidence            2379999999884

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.50  E-value=0.001  Score=56.29  Aligned_cols=99  Identities=18%  Similarity=0.220  Sum_probs=62.9

Q ss_pred             CCCCCCEEEEECCCh--HHHHHHHHHHHcCC---CEEEEEcCCchHHHHHHh---------cCCc--EEEcCCCCCCccH
Q 018022          198 NVEVGSTVVIFGLGS--IGLAVAEGARLCGA---TRIIGVDVISEKFEIGKR---------FGVT--EFVNSKNCGDKSV  261 (362)
Q Consensus       198 ~~~~g~~vlI~Gag~--~G~~a~~la~~~g~---~~vi~~~~~~~~~~~~~~---------~g~~--~vv~~~~~~~~~~  261 (362)
                      .+++|++||.+|+|.  ......+++...|.   .+|+.++.+++-.+.+++         .+..  .++..+.      
T Consensus        77 ~l~~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~------  150 (223)
T d1r18a_          77 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDG------  150 (223)
T ss_dssp             TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCG------
T ss_pred             ccCCCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccc------
Confidence            789999999998744  44444444444442   289999998876666543         1221  2222221      


Q ss_pred             HHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEE-Ecc
Q 018022          262 SQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV-LGV  305 (362)
Q Consensus       262 ~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~-~G~  305 (362)
                      .+..  ...+.||.|+-+.+.+..-+..++.|+++ |+++. +|.
T Consensus       151 ~~~~--~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~g-G~lV~pvg~  192 (223)
T d1r18a_         151 RKGY--PPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVPVGP  192 (223)
T ss_dssp             GGCC--GGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEEESC
T ss_pred             cccc--ccccceeeEEEEeechhchHHHHHhcCCC-cEEEEEEec
Confidence            1000  11127999999888766456889999998 99986 554

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.46  E-value=0.0092  Score=50.76  Aligned_cols=100  Identities=19%  Similarity=0.200  Sum_probs=62.8

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEE-cCCchHHHHH----HhcCCcE-EE--cCCCCCCccHHHHHHhhc--CCC
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFEIG----KRFGVTE-FV--NSKNCGDKSVSQIIIDMT--DGG  272 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~-~~~~~~~~~~----~~~g~~~-vv--~~~~~~~~~~~~~i~~~~--~~g  272 (362)
                      .+||+|+ +++|++.++.+...|+ +|+.. .+++++++.+    ++.|... .+  |-.+  .+++.+.+.+..  -++
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK--EADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTS--HHHHHHHHHHHHHHSSC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHHHHHHcCC
Confidence            5788887 9999999999999999 77776 4555555443    3455432 22  2222  223333333322  237


Q ss_pred             ccEEEEcCCCH-------------------------HHHHHHHHHhcc-CCceEEEEccC
Q 018022          273 ADYCFECVGLA-------------------------SLVQEAYACCRK-GWGKTIVLGVD  306 (362)
Q Consensus       273 ~d~vid~~g~~-------------------------~~~~~~~~~l~~-~~G~iv~~G~~  306 (362)
                      +|+++++.|..                         ...+.++..|++ ++|+|+.++..
T Consensus        80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~  139 (244)
T d1edoa_          80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASV  139 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCT
T ss_pred             CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcCh
Confidence            99999998852                         234556666633 23999999753

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=96.46  E-value=0.004  Score=52.41  Aligned_cols=94  Identities=18%  Similarity=0.187  Sum_probs=68.8

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEE
Q 018022          198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCF  277 (362)
Q Consensus       198 ~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vi  277 (362)
                      ..+++.+||=+|+|. |..+..+++ .|+ +|++++.+++.++.+++-+...++..+.   .++     .+.++.+|+|+
T Consensus        39 ~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~~---~~l-----~~~~~~fD~ii  107 (246)
T d2avna1          39 YLKNPCRVLDLGGGT-GKWSLFLQE-RGF-EVVLVDPSKEMLEVAREKGVKNVVEAKA---EDL-----PFPSGAFEAVL  107 (246)
T ss_dssp             HCCSCCEEEEETCTT-CHHHHHHHT-TTC-EEEEEESCHHHHHHHHHHTCSCEEECCT---TSC-----CSCTTCEEEEE
T ss_pred             hcCCCCEEEEECCCC-chhcccccc-cce-EEEEeecccccccccccccccccccccc---ccc-----cccccccccee
Confidence            356788999899984 888888876 588 9999999999999999877665555433   222     12234799998


Q ss_pred             EcCCC-------HHHHHHHHHHhccCCceEEEE
Q 018022          278 ECVGL-------ASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       278 d~~g~-------~~~~~~~~~~l~~~~G~iv~~  303 (362)
                      .....       ...+..+.+.|+++ |.+++.
T Consensus       108 ~~~~~~~~~~d~~~~l~~i~r~Lk~g-G~~ii~  139 (246)
T d2avna1         108 ALGDVLSYVENKDKAFSEIRRVLVPD-GLLIAT  139 (246)
T ss_dssp             ECSSHHHHCSCHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             eecchhhhhhhHHHHHHHHHhhcCcC-cEEEEE
Confidence            65432       24467888999998 988754

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=96.45  E-value=0.011  Score=50.42  Aligned_cols=81  Identities=15%  Similarity=0.203  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-C--hHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcEEEcCCCCCCccHHHHHHhhcCC--
Q 018022          201 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTDG--  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g--~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~~i~~~~~~--  271 (362)
                      +|+++||+|+ |  ++|.+.+..+...|+ +|+.++++++..+.+++    .+....+..+.....+..+...+....  
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            6889999987 6  688999999999999 89999998776555433    344333332221112333333333322  


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      ..|+.+++.+.
T Consensus        83 ~~d~~v~~a~~   93 (258)
T d1qsga_          83 KFDGFVHSIGF   93 (258)
T ss_dssp             SEEEEEECCCC
T ss_pred             ccceEEEeecc
Confidence            78999998764

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.43  E-value=0.0075  Score=50.64  Aligned_cols=99  Identities=21%  Similarity=0.271  Sum_probs=68.2

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc--EEEcCCCCCCccHHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIII  266 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~--~vv~~~~~~~~~~~~~i~  266 (362)
                      +...+.+++|++||=+|+|. |..+..+++. +. +|+++|.+++-++.+++    .+.+  .++..+.   +++     
T Consensus         8 l~~~~~~~~~~rILDiGcGt-G~~~~~la~~-~~-~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~---~~~-----   76 (234)
T d1xxla_           8 MIKTAECRAEHRVLDIGAGA-GHTALAFSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTA---ESL-----   76 (234)
T ss_dssp             HHHHHTCCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBT---TBC-----
T ss_pred             HHHHhCCCCCCEEEEeCCcC-cHHHHHHHHh-CC-eEEEEeCChhhhhhhhhhhccccccccccccccc---ccc-----
Confidence            56889999999999999866 6777777764 56 99999999887766643    3332  2222221   111     


Q ss_pred             hhcCCCccEEEEcCCC------HHHHHHHHHHhccCCceEEEE
Q 018022          267 DMTDGGADYCFECVGL------ASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       267 ~~~~~g~d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~  303 (362)
                      .+.++.||+|+..-.-      ...++.+.+.|+|+ |++++.
T Consensus        77 ~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~~~~~  118 (234)
T d1xxla_          77 PFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQD-GRFLLV  118 (234)
T ss_dssp             CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cccccccceeeeeceeecccCHHHHHHHHHHeeCCC-cEEEEE
Confidence            1223479999874332      25578999999998 998875

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.43  E-value=0.0029  Score=54.68  Aligned_cols=79  Identities=23%  Similarity=0.246  Sum_probs=53.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc----EEE--cCCCCCCccHHHHHHhhc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT----EFV--NSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~----~vv--~~~~~~~~~~~~~i~~~~  269 (362)
                      +|+++||+|+ +++|++.++.+...|+ +|+.+++++++++.+.    +.+..    ..+  |-.+  ++++.+.+.+..
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~--~~~v~~~~~~~~   80 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT--DAGQDEILSTTL   80 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCC--HHHHHHHHHHHH
Confidence            5788999998 9999999999999999 9999999998876543    23321    122  3222  233333333332


Q ss_pred             C--CCccEEEEcCCC
Q 018022          270 D--GGADYCFECVGL  282 (362)
Q Consensus       270 ~--~g~d~vid~~g~  282 (362)
                      .  +++|+++++.|.
T Consensus        81 ~~~g~iDilvnnAG~   95 (264)
T d1spxa_          81 GKFGKLDILVNNAGA   95 (264)
T ss_dssp             HHHSCCCEEEECCC-
T ss_pred             HHhCCCCEeeccccc
Confidence            2  379999999874

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.42  E-value=0.0076  Score=52.59  Aligned_cols=99  Identities=12%  Similarity=0.112  Sum_probs=69.9

Q ss_pred             HHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCC-c--EEEcCCCCCCccHHHH
Q 018022          192 AAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV-T--EFVNSKNCGDKSVSQI  264 (362)
Q Consensus       192 ~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~-~--~vv~~~~~~~~~~~~~  264 (362)
                      .+.+.+++++|++||=+|+|- |..++.+|+..|+ +|++++.+++..+.+++    .|. +  .+..      .++   
T Consensus        53 ~~~~~l~l~~G~~VLDiGCG~-G~~a~~~a~~~g~-~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~------~d~---  121 (285)
T d1kpga_          53 LALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLL------AGW---  121 (285)
T ss_dssp             HHHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEE------SCG---
T ss_pred             HHHHHcCCCCCCEEEEecCcc-hHHHHHHHhcCCc-ceEEEeccHHHHHHHHHHHHhhhhhhhhHHHH------hhh---
Confidence            356888999999999999866 6777888898999 99999999988777654    332 1  1221      111   


Q ss_pred             HHhhcCCCccEEEE-----cCCCH---HHHHHHHHHhccCCceEEEEc
Q 018022          265 IIDMTDGGADYCFE-----CVGLA---SLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       265 i~~~~~~g~d~vid-----~~g~~---~~~~~~~~~l~~~~G~iv~~G  304 (362)
                       ++ .++.+|.|+.     .++..   ..++.+.+.|+++ |++++--
T Consensus       122 -~~-~~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~Lkpg-G~~~l~~  166 (285)
T d1kpga_         122 -EQ-FDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHT  166 (285)
T ss_dssp             -GG-CCCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEE
T ss_pred             -hc-ccccccceeeehhhhhcCchhHHHHHHHHHhhcCCC-CcEEEEE
Confidence             11 1346888765     33322   4577899999998 9988643

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.38  E-value=0.0086  Score=52.11  Aligned_cols=99  Identities=12%  Similarity=0.203  Sum_probs=68.9

Q ss_pred             HHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc---EEEcCCCCCCccHHH
Q 018022          191 GAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQ  263 (362)
Q Consensus       191 ~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~~  263 (362)
                      ..+.+.+++++|++||=+|+|. |..+..+++..|+ +|++++.+++..+.+++    .|..   .+...+.   .    
T Consensus        42 ~~~~~~l~l~~g~~VLDiGCG~-G~~a~~~a~~~g~-~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d~---~----  112 (280)
T d2fk8a1          42 DLNLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGW---E----  112 (280)
T ss_dssp             HHHHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCG---G----
T ss_pred             HHHHHHcCCCCCCEEEEecCCc-hHHHHHHHHhCce-eEEEecchHHHHHHHHHHHHhhccccchhhhhhhh---h----
Confidence            3466888999999999999865 3455678888899 99999999998877654    3432   1221111   1    


Q ss_pred             HHHhhcCCCccEEEE-----cCCCH---HHHHHHHHHhccCCceEEEE
Q 018022          264 IIIDMTDGGADYCFE-----CVGLA---SLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       264 ~i~~~~~~g~d~vid-----~~g~~---~~~~~~~~~l~~~~G~iv~~  303 (362)
                         + ..+.||.|+-     .++.+   ..++.+.+.|+|+ |++++-
T Consensus       113 ---~-~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~Lkpg-G~~~i~  155 (280)
T d2fk8a1         113 ---D-FAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQ  155 (280)
T ss_dssp             ---G-CCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEE
T ss_pred             ---h-hccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCC-ceEEEE
Confidence               1 2347888864     33322   4578899999998 999864

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.31  E-value=0.005  Score=50.07  Aligned_cols=100  Identities=16%  Similarity=0.145  Sum_probs=66.8

Q ss_pred             HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc---EEEcCCCCCCccHHHHHH
Q 018022          194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIII  266 (362)
Q Consensus       194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~~~i~  266 (362)
                      ....++++|++||=+|+|. |..++.+|+. +. +|++++.+++.++.+++    +|..   +++.      .+..+.+.
T Consensus        26 l~~l~~~~g~~VLDiGcGs-G~~s~~lA~~-~~-~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~------gda~~~~~   96 (186)
T d1l3ia_          26 MCLAEPGKNDVAVDVGCGT-GGVTLELAGR-VR-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLME------GDAPEALC   96 (186)
T ss_dssp             HHHHCCCTTCEEEEESCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE------SCHHHHHT
T ss_pred             HHhcCCCCCCEEEEEECCe-Eccccccccc-ce-EEEEecCCHHHHHHHHHHHHHcCCCcceEEEE------Cchhhccc
Confidence            4567899999999998754 4444555554 44 99999999998877764    5542   2332      22223322


Q ss_pred             hhcCCCccEEEEcCCCH---HHHHHHHHHhccCCceEEEEcc
Q 018022          267 DMTDGGADYCFECVGLA---SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       267 ~~~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      .  ...+|.|+...+..   ..++.+.+.|+++ |+++....
T Consensus        97 ~--~~~~D~v~~~~~~~~~~~~~~~~~~~Lkpg-G~lvi~~~  135 (186)
T d1l3ia_          97 K--IPDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTAI  135 (186)
T ss_dssp             T--SCCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             c--cCCcCEEEEeCccccchHHHHHHHHHhCcC-CEEEEEee
Confidence            1  12799998765432   4577888999998 99887643

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.23  E-value=0.023  Score=44.28  Aligned_cols=82  Identities=24%  Similarity=0.233  Sum_probs=55.9

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  282 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~  282 (362)
                      +|.++|+|.+|.+.++-+...|..++++.++++++++.+.+ +|.. +.+..+    .       .  ...|+||-|+. 
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~-~~~~~~----~-------v--~~~Div~lavk-   66 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVE-TSATLP----E-------L--HSDDVLILAVK-   66 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCE-EESSCC----C-------C--CTTSEEEECSC-
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccc-cccccc----c-------c--cccceEEEecC-
Confidence            57889999999987774444453499999999999888765 6654 333222    1       1  14688888876 


Q ss_pred             HHHHHHHHHHhccCCceEE
Q 018022          283 ASLVQEAYACCRKGWGKTI  301 (362)
Q Consensus       283 ~~~~~~~~~~l~~~~G~iv  301 (362)
                      +..+...++.+++. +.++
T Consensus        67 P~~~~~v~~~l~~~-~~~v   84 (152)
T d1yqga2          67 PQDMEAACKNIRTN-GALV   84 (152)
T ss_dssp             HHHHHHHHTTCCCT-TCEE
T ss_pred             HHHHHHhHHHHhhc-ccEE
Confidence            44477777777765 5544

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.22  E-value=0.019  Score=49.05  Aligned_cols=95  Identities=21%  Similarity=0.347  Sum_probs=65.0

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EEEcCCCCCCccHHHHHHhhcCCCc
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMTDGGA  273 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~~i~~~~~~g~  273 (362)
                      .++|++||=+|+|. |..++.+++ .|. +|+++|.+++-.+.+++    .|.. .++.      .++.+   .+..+.|
T Consensus       118 ~~~g~~VLDiGcGs-G~l~i~aa~-~g~-~V~gvDis~~av~~A~~na~~n~~~~~~~~------~d~~~---~~~~~~f  185 (254)
T d2nxca1         118 LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLE------GSLEA---ALPFGPF  185 (254)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEE------SCHHH---HGGGCCE
T ss_pred             cCccCEEEEcccch-hHHHHHHHh-cCC-EEEEEECChHHHHHHHHHHHHcCCceeEEe------ccccc---ccccccc
Confidence            57999999999865 666665554 687 89999999998877764    3443 3332      22222   1223479


Q ss_pred             cEEEEcCCCH---HHHHHHHHHhccCCceEEEEccC
Q 018022          274 DYCFECVGLA---SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       274 d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      |+|+......   ..++.+.+.|+++ |++++.|..
T Consensus       186 D~V~ani~~~~l~~l~~~~~~~LkpG-G~lilSgil  220 (254)
T d2nxca1         186 DLLVANLYAELHAALAPRYREALVPG-GRALLTGIL  220 (254)
T ss_dssp             EEEEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEEE
T ss_pred             chhhhccccccHHHHHHHHHHhcCCC-cEEEEEecc
Confidence            9999765433   3356788899998 999987753

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.18  E-value=0.011  Score=49.30  Aligned_cols=100  Identities=19%  Similarity=0.297  Sum_probs=69.0

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc--EEEcCCCCCCccHHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIII  266 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~--~vv~~~~~~~~~~~~~i~  266 (362)
                      +.+.++++++++||=+|+| .|..+..+++. |. +|++++.+++-++.+++    .+.+  .++..+.   .++     
T Consensus         7 ll~~~~l~~~~rVLDiGcG-~G~~~~~l~~~-~~-~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~---~~l-----   75 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVATG-GGHVANAFAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA---EQM-----   75 (231)
T ss_dssp             HHHHHTCCSCCEEEEETCT-TCHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC----CC-----
T ss_pred             HHHhcCCCCcCEEEEeccc-CcHHHHHHHHh-CC-EEEEEECCHHHHhhhhhccccccccccccccccc---ccc-----
Confidence            5678999999999999987 36666666654 66 99999999987776653    3443  2333222   111     


Q ss_pred             hhcCCCccEEEEcCC-----CH-HHHHHHHHHhccCCceEEEEc
Q 018022          267 DMTDGGADYCFECVG-----LA-SLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       267 ~~~~~g~d~vid~~g-----~~-~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      .+..+.||+|+..-.     .+ ..+..+.+.|+|+ |++++.-
T Consensus        76 ~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~i~~  118 (231)
T d1vl5a_          76 PFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVD  118 (231)
T ss_dssp             CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cccccccccccccccccccCCHHHHHHHHHHhcCCC-cEEEEEe
Confidence            122347999987533     22 5578999999998 9998764

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.15  E-value=0.029  Score=44.21  Aligned_cols=71  Identities=18%  Similarity=0.261  Sum_probs=51.7

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCH
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  283 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~  283 (362)
                      +|.++|.|.+|...+.-+...|+ .|.+.+++.++.+.+.+.+....        .+..+.+.     ..|+++-|+...
T Consensus         3 kIg~IGlG~MG~~iA~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~--------~~~~e~~~-----~~diii~~v~~~   68 (162)
T d3cuma2           3 QIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGASAA--------RSARDAVQ-----GADVVISMLPAS   68 (162)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEEC--------SSHHHHHT-----SCSEEEECCSCH
T ss_pred             EEEEEEEHHHHHHHHHHHHHCCC-eEEEEECchhhhhhhhhhhcccc--------chhhhhcc-----ccCeeeecccch
Confidence            68899999999988888888899 99999999999999888776431        12222221     367777777766


Q ss_pred             HHHHH
Q 018022          284 SLVQE  288 (362)
Q Consensus       284 ~~~~~  288 (362)
                      .....
T Consensus        69 ~~~~~   73 (162)
T d3cuma2          69 QHVEG   73 (162)
T ss_dssp             HHHHH
T ss_pred             hhHHH
Confidence            54443

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.15  E-value=0.012  Score=48.49  Aligned_cols=81  Identities=22%  Similarity=0.251  Sum_probs=60.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .|.+|+|.|.|.+|..+++++...|+ +|++.+.+.++.+....+|...+ ..+     +       +....+|+++=|.
T Consensus        26 ~gk~v~IqG~G~VG~~~A~~L~~~Ga-kvvv~d~d~~~~~~~~~~g~~~~-~~~-----~-------~~~~~~DI~iPcA   91 (201)
T d1c1da1          26 DGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAV-ALE-----D-------VLSTPCDVFAPCA   91 (201)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-CGG-----G-------GGGCCCSEEEECS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEecchHHHHHHHHhhccccc-Ccc-----c-------cccccceeeeccc
Confidence            78899999999999999999999999 99999999999999888887532 211     1       1222688888766


Q ss_pred             CCHHHHHHHHHHhcc
Q 018022          281 GLASLVQEAYACCRK  295 (362)
Q Consensus       281 g~~~~~~~~~~~l~~  295 (362)
                      -....-....+.++.
T Consensus        92 ~~~~I~~~~a~~i~a  106 (201)
T d1c1da1          92 MGGVITTEVARTLDC  106 (201)
T ss_dssp             CSCCBCHHHHHHCCC
T ss_pred             ccccccHHHHhhhhh
Confidence            554323355555654

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.15  E-value=0.018  Score=49.78  Aligned_cols=102  Identities=14%  Similarity=0.083  Sum_probs=70.2

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc---EEEcCCCCCCccHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQII  265 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~~~i  265 (362)
                      +.....++++++||=+|+|. |..+..+++..|+ +|++++.++..++.+++    .|..   .++..+-   .++    
T Consensus        59 l~~~~~l~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~---~~l----  129 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLGAGY-GGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF---LEI----  129 (282)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT---TSC----
T ss_pred             HHHhcCCCCCCEEEEeCCCC-cHHHhhhhccCCc-EEEEEeccchhhhhhhccccccccccccccccccc---ccc----
Confidence            44567899999999999875 6677778887788 99999999988776654    3432   2333222   111    


Q ss_pred             HhhcCCCccEEEEcCC-----C-HHHHHHHHHHhccCCceEEEEcc
Q 018022          266 IDMTDGGADYCFECVG-----L-ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       266 ~~~~~~g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                       .+..+.||+|+-.-.     . ...+..+.+.|+++ |++++...
T Consensus       130 -~~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~Lkpg-G~l~~~~~  173 (282)
T d2o57a1         130 -PCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP  173 (282)
T ss_dssp             -SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             -cccccccchhhccchhhhccCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence             112237999986322     2 25578999999998 99887643

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=95.92  E-value=0.2  Score=38.47  Aligned_cols=90  Identities=13%  Similarity=-0.013  Sum_probs=63.2

Q ss_pred             CEEEEEC-CChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC--CccEEEEc
Q 018022          203 STVVIFG-LGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG--GADYCFEC  279 (362)
Q Consensus       203 ~~vlI~G-ag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~--g~d~vid~  279 (362)
                      .+|.|+| .|.+|...+..++..|+ .|.+.+++.+........+++.++....  .....+.+.+..+.  .=.+++|+
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~v~~~~~--~~~~~~v~~~~~~~~~~~~iiiD~   86 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGY-PISILDREDWAVAESILANADVVIVSVP--INLTLETIERLKPYLTENMLLADL   86 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTCGGGHHHHHTTCSEEEECSC--GGGHHHHHHHHGGGCCTTSEEEEC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCC-CcEecccccccccchhhhhccccccccc--hhhheeeeecccccccCCceEEEe
Confidence            5799999 69999999999999999 9999999888776666667777766544  23344444444432  22588898


Q ss_pred             CCCHHHHHHHHHHhcc
Q 018022          280 VGLASLVQEAYACCRK  295 (362)
Q Consensus       280 ~g~~~~~~~~~~~l~~  295 (362)
                      ...+..+.+.+....+
T Consensus        87 ~Svk~~~~~~~~~~~~  102 (152)
T d2pv7a2          87 TSVKREPLAKMLEVHT  102 (152)
T ss_dssp             CSCCHHHHHHHHHHCS
T ss_pred             cccCHHHHHHHHHHcc
Confidence            8876545444444444

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.90  E-value=0.021  Score=46.00  Aligned_cols=38  Identities=26%  Similarity=0.299  Sum_probs=33.8

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       198 ~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      ....+.+|+|+|+|+.|+.|+..+..+|+ +|+..++.+
T Consensus        39 ~~~~~k~V~IIGaGPAGL~AA~~la~~G~-~Vtl~E~~~   76 (179)
T d1ps9a3          39 PAVQKKNLAVVGAGPAGLAFAINAAARGH-QVTLFDAHS   76 (179)
T ss_dssp             SCSSCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCCCCcEEEEECccHHHHHHHHHHHhhcc-ceEEEeccC
Confidence            34567899999999999999999999999 999998765

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.89  E-value=0.02  Score=48.01  Aligned_cols=102  Identities=16%  Similarity=0.227  Sum_probs=68.6

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCC-EEEEEcCCchHHHHHHhc----CCcEEEcCCCCCCccHHHHHHhhc
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~~i~~~~  269 (362)
                      +...++||++||=+|+|+ |..+..+|+..|.+ +|++++.+++.++.+++.    +....+..+.   .. .+.... .
T Consensus        67 ~~l~i~pG~~VLDlGaGs-G~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~---~~-~~~~~~-~  140 (227)
T d1g8aa_          67 KNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDA---TK-PEEYRA-L  140 (227)
T ss_dssp             CCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCT---TC-GGGGTT-T
T ss_pred             cccccCCCCEEEEeccCC-CHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEEC---CC-cccccc-c
Confidence            556799999999999876 88888889887643 999999999988777642    3222232222   11 111111 1


Q ss_pred             CCCccEEEEcCCCH----HHHHHHHHHhccCCceEEEE
Q 018022          270 DGGADYCFECVGLA----SLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       270 ~~g~d~vid~~g~~----~~~~~~~~~l~~~~G~iv~~  303 (362)
                      ...+|+++..+.-.    ..+..+.+.|+++ |+++++
T Consensus       141 ~~~vD~i~~d~~~~~~~~~~l~~~~~~Lkpg-G~lvi~  177 (227)
T d1g8aa_         141 VPKVDVIFEDVAQPTQAKILIDNAEVYLKRG-GYGMIA  177 (227)
T ss_dssp             CCCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccceEEEEEEccccchHHHHHHHHHHhcccC-CeEEEE
Confidence            12688888765432    3477888999998 988765

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=95.85  E-value=0.0088  Score=51.45  Aligned_cols=81  Identities=14%  Similarity=0.105  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-C--hHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH---hcC-CcEEEcCCCCCCccHHHHHHhhc--CC
Q 018022          201 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKFEIGK---RFG-VTEFVNSKNCGDKSVSQIIIDMT--DG  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g--~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~---~~g-~~~vv~~~~~~~~~~~~~i~~~~--~~  271 (362)
                      +|.++||+|+ |  ++|.+.++.+...|+ +|+.++++++..+.++   +.+ ...++..+-..+.+..+.+.+..  -+
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   82 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   82 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence            5889999986 5  699999999999999 9999999875333333   222 22222221111233333333322  23


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      .+|+++.+.|.
T Consensus        83 ~id~lV~nag~   93 (274)
T d2pd4a1          83 SLDFIVHSVAF   93 (274)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCeEEeeccc
Confidence            79999998885

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.84  E-value=0.041  Score=47.63  Aligned_cols=102  Identities=20%  Similarity=0.214  Sum_probs=60.2

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCC--EEEEEcCCchHHH----HHHhc---CCc-EEE--cCCCCCCccHHHHHHhhcC
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGAT--RIIGVDVISEKFE----IGKRF---GVT-EFV--NSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~--~vi~~~~~~~~~~----~~~~~---g~~-~vv--~~~~~~~~~~~~~i~~~~~  270 (362)
                      .|||+|+ +++|++.+..+...|++  .|+.+.++.++.+    .++++   +.. ..+  |-.+  .++..+.+.+...
T Consensus         4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~   81 (285)
T d1jtva_           4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRD--SKSVAAARERVTE   81 (285)
T ss_dssp             EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTC--HHHHHHHHHTCTT
T ss_pred             EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccc--hHhhhhhhhhccc
Confidence            4677898 99999999988888874  3444455444332    23333   222 222  3222  2344444444444


Q ss_pred             CCccEEEEcCCCH-------------------------HHHHHHHHHhccC-CceEEEEccCC
Q 018022          271 GGADYCFECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGVDQ  307 (362)
Q Consensus       271 ~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~~~  307 (362)
                      +.+|+++++.|..                         ...+.++..|++. +|+|+.++...
T Consensus        82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~  144 (285)
T d1jtva_          82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVG  144 (285)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGG
T ss_pred             cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechh
Confidence            5899999988753                         1344566666432 38999987643

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=95.83  E-value=0.013  Score=41.82  Aligned_cols=71  Identities=25%  Similarity=0.281  Sum_probs=47.5

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch--HHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~--~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      .|.+|+|+|.|..|+++++++...|+ +|++.|.+..  ..+.++. +....+....   .   ..+.     .+|.++-
T Consensus         4 ~~K~v~ViGlG~sG~s~a~~L~~~g~-~v~~~D~~~~~~~~~~~~~-~~~~~~~~~~---~---~~~~-----~~d~vi~   70 (93)
T d2jfga1           4 QGKNVVIIGLGLTGLSCVDFFLARGV-TPRVMDTRMTPPGLDKLPE-AVERHTGSLN---D---EWLM-----AADLIVA   70 (93)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHHTTC-CCEEEESSSSCTTGGGSCT-TSCEEESBCC---H---HHHH-----HCSEEEE
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEeeCCcCchhHHHHhh-ccceeecccc---h---hhhc-----cCCEEEE
Confidence            46789999999999999999999999 9999987543  2222222 2333333322   1   1121     3788888


Q ss_pred             cCCCHH
Q 018022          279 CVGLAS  284 (362)
Q Consensus       279 ~~g~~~  284 (362)
                      +.|.+.
T Consensus        71 SPGi~~   76 (93)
T d2jfga1          71 SPGIAL   76 (93)
T ss_dssp             CTTSCT
T ss_pred             CCCCCC
Confidence            888664

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=95.80  E-value=0.022  Score=45.53  Aligned_cols=91  Identities=13%  Similarity=0.041  Sum_probs=57.3

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcC---CcEEEcCCCCCCccHHHHHHhhcCCCcc
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG---VTEFVNSKNCGDKSVSQIIIDMTDGGAD  274 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g---~~~vv~~~~~~~~~~~~~i~~~~~~g~d  274 (362)
                      ..++.+|+|+|+|+.+.+++..+...+ .+|+++.|+.++.+.+. .++   ....+..++            .....+|
T Consensus        15 ~~~~k~vlIlGaGGaarai~~aL~~~~-~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~------------~~~~~~d   81 (171)
T d1p77a1          15 LRPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANRTFSKTKELAERFQPYGNIQAVSMDS------------IPLQTYD   81 (171)
T ss_dssp             CCTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG------------CCCSCCS
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHcccC-ceeeeccchHHHHHHHHHHHhhccccchhhhcc------------ccccccc
Confidence            347889999999999999988877755 49999999998877654 333   222222221            1112699


Q ss_pred             EEEEcCCCHHHH---HHHHHHhccCCceEEEE
Q 018022          275 YCFECVGLASLV---QEAYACCRKGWGKTIVL  303 (362)
Q Consensus       275 ~vid~~g~~~~~---~~~~~~l~~~~G~iv~~  303 (362)
                      ++|+|++....-   ......++++ ..++.+
T Consensus        82 iiIN~tp~g~~~~~~~~~~~~~~~~-~~~~D~  112 (171)
T d1p77a1          82 LVINATSAGLSGGTASVDAEILKLG-SAFYDM  112 (171)
T ss_dssp             EEEECCCC-------CCCHHHHHHC-SCEEES
T ss_pred             eeeecccccccccccchhhhhhccc-ceeeee
Confidence            999998865211   1123345564 555554

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.71  E-value=0.0045  Score=52.17  Aligned_cols=98  Identities=14%  Similarity=0.154  Sum_probs=65.0

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc---EEEcCCCCCCccHHHHHHhhcCCCccE
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT---EFVNSKNCGDKSVSQIIIDMTDGGADY  275 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~i~~~~~~g~d~  275 (362)
                      ..+|.+||-+|+|. |..+..+++..+. ++++++.+++-++.+++....   .+....    .+.......+..+.||.
T Consensus        51 ~~~g~~VLdIGcG~-G~~a~~~a~~~~~-~v~~id~s~~~~~~a~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~fD~  124 (229)
T d1zx0a1          51 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK----GLWEDVAPTLPDGHFDG  124 (229)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE----SCHHHHGGGSCTTCEEE
T ss_pred             ccCCCeEEEeeccc-hHHHHHHHHcCCC-eEEEeCCCHHHHHHHHHHhhhccccccccc----ccccccccccccccccc
Confidence            36889999999866 6777788876655 899999999999888764221   111111    12333333444447888


Q ss_pred             EE-EcCCCH----------HHHHHHHHHhccCCceEEEE
Q 018022          276 CF-ECVGLA----------SLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       276 vi-d~~g~~----------~~~~~~~~~l~~~~G~iv~~  303 (362)
                      ++ |.+...          ..+..+.+.|+++ |+++++
T Consensus       125 i~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpG-G~~~~~  162 (229)
T d1zx0a1         125 ILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYC  162 (229)
T ss_dssp             EEECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEEC
T ss_pred             eeecccccccccccccCHHHHHHHHHHHcCCC-cEEEEE
Confidence            74 544332          2456788999998 999875

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.69  E-value=0.014  Score=49.57  Aligned_cols=79  Identities=11%  Similarity=0.164  Sum_probs=49.7

Q ss_pred             CEEEEECC-ChHHHHHHHHHH---HcCCCEEEEEcCCchHHHHHHhc---CC-cEEEcCCCCCCccHHHHHH---hhcC-
Q 018022          203 STVVIFGL-GSIGLAVAEGAR---LCGATRIIGVDVISEKFEIGKRF---GV-TEFVNSKNCGDKSVSQIII---DMTD-  270 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~---~~g~~~vi~~~~~~~~~~~~~~~---g~-~~vv~~~~~~~~~~~~~i~---~~~~-  270 (362)
                      .+|||+|+ +++|++.++.+.   ..|+ +|+++++++++++.++++   +. -.++.-+-.+.++..+.+.   +... 
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            47999998 999999876554   3577 999999999887665432   22 2223221101233333333   3333 


Q ss_pred             CCccEEEEcCCC
Q 018022          271 GGADYCFECVGL  282 (362)
Q Consensus       271 ~g~d~vid~~g~  282 (362)
                      +.+|++|++.|.
T Consensus        82 ~~iDiLvnNAg~   93 (248)
T d1snya_          82 QGLNVLFNNAGI   93 (248)
T ss_dssp             GCCSEEEECCCC
T ss_pred             CCcceEEeeccc
Confidence            379999998875

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=95.66  E-value=0.16  Score=40.34  Aligned_cols=131  Identities=13%  Similarity=0.037  Sum_probs=81.0

Q ss_pred             EEEEECCChHHHH-HHHHHHHcCCC-EEE-EEcCCchHHHH-HHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          204 TVVIFGLGSIGLA-VAEGARLCGAT-RII-GVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       204 ~vlI~Gag~~G~~-a~~la~~~g~~-~vi-~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      +|.|+|+|.+|.- .+...+..+-. .++ +.+++.++.+. .++++...+++       ++.+.+.+   ..+|+|+.|
T Consensus         5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~-------~~~ell~~---~~id~v~I~   74 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD-------SYEELLES---GLVDAVDLT   74 (181)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES-------CHHHHHHS---SCCSEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee-------eeeccccc---cccceeecc
Confidence            5789999999964 56666654321 455 55777777665 45677765542       34443332   369999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH------HHHh-cCcEE-EEeeccCCC-ccccHHHHHHHHHcC
Q 018022          280 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF------EVLH-SGKIL-MGSLFGGLK-AKSDIPILLKRYMDK  350 (362)
Q Consensus       280 ~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~------~~~~-~~~~i-~g~~~~~~~-~~~~l~~~l~~~~~g  350 (362)
                      +......+.+..++..  |.-+++-.+     +..+..      .+.. ++..+ .++. ..+. ....+.++.+++++|
T Consensus        75 tp~~~h~~~~~~al~~--gk~V~~EKP-----l~~~~~e~~~l~~~~~~~~~~~~v~~~-~R~~~~~~~~~~~~~~i~~G  146 (181)
T d1zh8a1          75 LPVELNLPFIEKALRK--GVHVICEKP-----ISTDVETGKKVVELSEKSEKTVYIAEN-FRENSYQKEFEDFYQVVAEG  146 (181)
T ss_dssp             CCGGGHHHHHHHHHHT--TCEEEEESS-----SSSSHHHHHHHHHHHHHCSSCEEEECG-GGCCHHHHHHHHHHHHHHSC
T ss_pred             cccccccccccccccc--chhhhcCCC-----CcCCHHHHHHHHHHHHHhCCeEEEEee-ccccccCHHHHHHHHHHHCC
Confidence            9988768888888887  577777542     223322      2332 34444 3332 2211 125678889999998


Q ss_pred             Cc
Q 018022          351 WS  352 (362)
Q Consensus       351 ~l  352 (362)
                      +|
T Consensus       147 ~i  148 (181)
T d1zh8a1         147 KP  148 (181)
T ss_dssp             CC
T ss_pred             CC
Confidence            76

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=95.51  E-value=0.042  Score=43.32  Aligned_cols=134  Identities=10%  Similarity=0.013  Sum_probs=81.3

Q ss_pred             EEEEECCChHHHH-HHHHHHHc-CCCEEEEEcCCchHHHHH-HhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          204 TVVIFGLGSIGLA-VAEGARLC-GATRIIGVDVISEKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       204 ~vlI~Gag~~G~~-a~~la~~~-g~~~vi~~~~~~~~~~~~-~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      +|.|+|+|.+|.. .+...+.. +. .+++++.++++.+.+ ++++...++..       +.+.+    ...+|+|+.|+
T Consensus         3 rvgiiG~G~~~~~~~~~~l~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~-------~~~ll----~~~iD~V~I~t   70 (167)
T d1xeaa1           3 KIAMIGLGDIAQKAYLPVLAQWPDI-ELVLCTRNPKVLGTLATRYRVSATCTD-------YRDVL----QYGVDAVMIHA   70 (167)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTE-EEEEECSCHHHHHHHHHHTTCCCCCSS-------TTGGG----GGCCSEEEECS
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEECCHHHHHHHHHhccccccccc-------HHHhc----ccccceecccc
Confidence            5789999999964 56566555 45 677888888777665 45776543322       11111    12599999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEccCCCCCcc-ccCHHHHHh-cCcEEEEeeccCCCccccHHHHHHHHHcCCccc
Q 018022          281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQL-SLSSFEVLH-SGKILMGSLFGGLKAKSDIPILLKRYMDKWSYV  354 (362)
Q Consensus       281 g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~-~~~~~~~~~-~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~  354 (362)
                      +.....+.+..++..  |.-+++-.+...... ...+..+.. ++..+.-.+.  + ....+.++++.+..|+|..
T Consensus        71 p~~~H~~~~~~al~~--gk~V~~EKP~~~~~~e~~~l~~~a~~~~~~~~vg~~--r-~~~~~~~~~~~~~~G~ig~  141 (167)
T d1xeaa1          71 ATDVHSTLAAFFLHL--GIPTFVDKPLAASAQECENLYELAEKHHQPLYVGFN--G-FDAMVQDWLQVAAAGKLPT  141 (167)
T ss_dssp             CGGGHHHHHHHHHHT--TCCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEECG--T-HHHHHHHHHHHHHHTCCCH
T ss_pred             ccccccccccccccc--ccccccCCCCcCCHHHHHHHHHHHHHcCCEEEEEeC--c-CCHHHHHHHHHhhcCCCCc
Confidence            988778888898888  466776442111100 112223322 3444432222  2 1355788888888898863

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.44  E-value=0.08  Score=44.85  Aligned_cols=42  Identities=24%  Similarity=0.165  Sum_probs=32.8

Q ss_pred             CCCEEEEECC-ChHHHHHHH-HHHH--cCCCEEEEEcCCchHHHHHH
Q 018022          201 VGSTVVIFGL-GSIGLAVAE-GARL--CGATRIIGVDVISEKFEIGK  243 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~-la~~--~g~~~vi~~~~~~~~~~~~~  243 (362)
                      .|..+||+|+ +++|++.++ +|+.  .|+ +|+.+++++++++.+.
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~~   50 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLK   50 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHHH
Confidence            4667788898 999998765 4553  688 9999999999887653

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.36  E-value=0.011  Score=49.52  Aligned_cols=106  Identities=14%  Similarity=0.079  Sum_probs=67.0

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc-CCcE------------EEcCCCCCCcc-
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVTE------------FVNSKNCGDKS-  260 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-g~~~------------vv~~~~~~~~~-  260 (362)
                      ....+.++.+||..|+|. |..+..+|+ .|+ +|+++|.+++-++.+++- +...            ....... ..+ 
T Consensus        39 ~~l~~~~~~rvLd~GCG~-G~~a~~LA~-~G~-~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~  114 (229)
T d2bzga1          39 TFLKGKSGLRVFFPLCGK-AVEMKWFAD-RGH-SVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSG-NISL  114 (229)
T ss_dssp             HHHTTCCSCEEEETTCTT-CTHHHHHHH-TTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTS-SEEE
T ss_pred             HhcCCCCCCEEEEeCCCC-cHHHHHHHh-CCC-cEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCC-cEEE
Confidence            456788999999999977 777777776 699 999999999988877652 2111            1000000 000 


Q ss_pred             HHHHHHhhc---CCCccEEEEcCCC--------HHHHHHHHHHhccCCceEEEEcc
Q 018022          261 VSQIIIDMT---DGGADYCFECVGL--------ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       261 ~~~~i~~~~---~~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      +...+.++.   .+.+|+|+++.--        ...+..+.+.|+++ |++++...
T Consensus       115 ~~~d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~Lkpg-G~~~l~~~  169 (229)
T d2bzga1         115 YCCSIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKK-FQYLLCVL  169 (229)
T ss_dssp             EESCGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             EEcchhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCc-ceEEEEEc
Confidence            000111111   2268999986532        24467899999998 98776643

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.35  E-value=0.038  Score=43.06  Aligned_cols=85  Identities=14%  Similarity=0.123  Sum_probs=61.5

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  282 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~  282 (362)
                      +|.++|+|.+|.+.+.-....|. ++++.+++.++.+.+ +++|...+        .+..+.+.     ..|+||-|+.-
T Consensus         2 kIg~IG~G~mG~al~~~l~~~~~-~i~v~~r~~~~~~~l~~~~g~~~~--------~~~~~~~~-----~~dvIilavkp   67 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQLALPYA--------MSHQDLID-----QVDLVILGIKP   67 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHHTCCBC--------SSHHHHHH-----TCSEEEECSCG
T ss_pred             EEEEEeccHHHHHHHHHHHhCCC-eEEEEcChHHhHHhhccccceeee--------chhhhhhh-----ccceeeeecch
Confidence            57889999999988876666787 999999998887765 56775432        22333333     48999999864


Q ss_pred             HHHHHHHHHHhccCCceEEEEc
Q 018022          283 ASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       283 ~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                       ..+..+++.++++ ..++.+.
T Consensus        68 -~~~~~vl~~l~~~-~~iis~~   87 (152)
T d2ahra2          68 -QLFETVLKPLHFK-QPIISMA   87 (152)
T ss_dssp             -GGHHHHHTTSCCC-SCEEECC
T ss_pred             -HhHHHHhhhcccc-eeEeccc
Confidence             4478888888886 6666553

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.34  E-value=0.051  Score=44.39  Aligned_cols=87  Identities=20%  Similarity=0.181  Sum_probs=62.6

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .|.+|.|+|.|.+|...+++++..|. +|++.++.........  +..    .     .++.+.+.+     .|+++-++
T Consensus        42 ~gk~vgIiG~G~IG~~va~~l~~fg~-~V~~~d~~~~~~~~~~--~~~----~-----~~l~~~l~~-----sDii~~~~  104 (197)
T d1j4aa1          42 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPELEKK--GYY----V-----DSLDDLYKQ-----ADVISLHV  104 (197)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHT--TCB----C-----SCHHHHHHH-----CSEEEECS
T ss_pred             cCCeEEEecccccchhHHHhHhhhcc-cccccCcccccccccc--eee----e-----ccccccccc-----cccccccC
Confidence            47899999999999999999999999 9999987655433221  211    1     335455543     78998887


Q ss_pred             CCHH----HH-HHHHHHhccCCceEEEEcc
Q 018022          281 GLAS----LV-QEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       281 g~~~----~~-~~~~~~l~~~~G~iv~~G~  305 (362)
                      ....    .+ ...++.|+++ ..++.+|.
T Consensus       105 plt~~T~~li~~~~l~~mk~~-a~lIN~sR  133 (197)
T d1j4aa1         105 PDVPANVHMINDESIAKMKQD-VVIVNVSR  133 (197)
T ss_dssp             CCCGGGTTCBSHHHHHHSCTT-EEEEECSC
T ss_pred             CccccccccccHHHHhhhCCc-cEEEecCc
Confidence            6431    12 4678899997 88888875

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.34  E-value=0.062  Score=48.89  Aligned_cols=105  Identities=19%  Similarity=0.276  Sum_probs=69.6

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc---------------CCcEEEcCCCCC
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF---------------GVTEFVNSKNCG  257 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~---------------g~~~vv~~~~~~  257 (362)
                      +.+..++++|+++|=+|+|. |..+.++|+..|+.++++++.++...+.+++.               +...........
T Consensus       208 Il~~l~Lkpgd~fLDLGCG~-G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f~  286 (406)
T d1u2za_         208 VYQQCQLKKGDTFMDLGSGV-GNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV  286 (406)
T ss_dssp             HHHHTTCCTTCEEEEESCTT-SHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST
T ss_pred             HHHHhCCCCCCEEEeCCCCC-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeeechh
Confidence            56888999999999999876 89999999999987999999998877766531               111221111100


Q ss_pred             CccHHHHHHhhcCCCccEEEEcCC--C---HHHHHHHHHHhccCCceEEEE
Q 018022          258 DKSVSQIIIDMTDGGADYCFECVG--L---ASLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       258 ~~~~~~~i~~~~~~g~d~vid~~g--~---~~~~~~~~~~l~~~~G~iv~~  303 (362)
                      ..+.   ...... .+|+++...-  .   ...+.++++.|++| |+|+..
T Consensus       287 ~~~~---~d~~~~-~adVV~inn~~f~~~l~~~L~ei~r~LKPG-GrIVs~  332 (406)
T d1u2za_         287 DNNR---VAELIP-QCDVILVNNFLFDEDLNKKVEKILQTAKVG-CKIISL  332 (406)
T ss_dssp             TCHH---HHHHGG-GCSEEEECCTTCCHHHHHHHHHHHTTCCTT-CEEEES
T ss_pred             hccc---cccccc-cceEEEEecccCchHHHHHHHHHHHhcCCC-cEEEEe
Confidence            1111   111111 4777775311  1   24477888999998 999875

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=95.28  E-value=0.087  Score=41.25  Aligned_cols=93  Identities=20%  Similarity=0.274  Sum_probs=56.8

Q ss_pred             CEEEEECCChHHH-HHHHHHHHcCCCEEEEE-cCCc--hHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEE
Q 018022          203 STVVIFGLGSIGL-AVAEGARLCGATRIIGV-DVIS--EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCF  277 (362)
Q Consensus       203 ~~vlI~Gag~~G~-~a~~la~~~g~~~vi~~-~~~~--~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vi  277 (362)
                      -+|.|+|+|.+|. ...++.+....-.++++ +++.  ...++++++|.....        ...+.+.+...- ++|+||
T Consensus         5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~--------~~~d~l~~~~~~~~iDiVf   76 (157)
T d1nvmb1           5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY--------AGVEGLIKLPEFADIDFVF   76 (157)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES--------SHHHHHHHSGGGGGEEEEE
T ss_pred             cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccc--------cceeeeeecccccccCEEE
Confidence            4789999999987 46677776644356665 4444  345678888876421        223444433322 699999


Q ss_pred             EcCCCHHHHHHH--HHHhccCCceEEEEc
Q 018022          278 ECVGLASLVQEA--YACCRKGWGKTIVLG  304 (362)
Q Consensus       278 d~~g~~~~~~~~--~~~l~~~~G~iv~~G  304 (362)
                      +++......+..  .+.++.+ -.++...
T Consensus        77 ~ATpag~h~~~~~~~~aa~~G-~~VID~s  104 (157)
T d1nvmb1          77 DATSASAHVQNEALLRQAKPG-IRLIDLT  104 (157)
T ss_dssp             ECSCHHHHHHHHHHHHHHCTT-CEEEECS
T ss_pred             EcCCchhHHHhHHHHHHHHcC-CEEEEcc
Confidence            998865445543  4446663 3444443

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.25  E-value=0.048  Score=44.63  Aligned_cols=94  Identities=17%  Similarity=0.246  Sum_probs=63.0

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCC-cEEEcCCCCCCccHHHHHHhhcCCC
Q 018022          198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV-TEFVNSKNCGDKSVSQIIIDMTDGG  272 (362)
Q Consensus       198 ~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~-~~vv~~~~~~~~~~~~~i~~~~~~g  272 (362)
                      -++++++||=+|+|. |..+..+++ .|. +|+++|.+++-++.+++    .+. ...+..+.   .++     .+.++.
T Consensus        34 ~l~~~~~ILDiGcG~-G~~~~~la~-~~~-~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~---~~l-----~~~~~~  102 (226)
T d1ve3a1          34 YMKKRGKVLDLACGV-GGFSFLLED-YGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDA---RKL-----SFEDKT  102 (226)
T ss_dssp             SCCSCCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCT---TSC-----CSCTTC
T ss_pred             hcCCCCEEEEECCCc-chhhhhHhh-hhc-ccccccccccchhhhhhhhcccccccccccccc---ccc-----cccCcC
Confidence            357889999999976 777777776 477 99999999988877754    332 22332222   111     112237


Q ss_pred             ccEEEEcCCCH--------HHHHHHHHHhccCCceEEEE
Q 018022          273 ADYCFECVGLA--------SLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       273 ~d~vid~~g~~--------~~~~~~~~~l~~~~G~iv~~  303 (362)
                      +|+|+-...-.        ..+..+.+.|+++ |++++.
T Consensus       103 fD~I~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~lii~  140 (226)
T d1ve3a1         103 FDYVIFIDSIVHFEPLELNQVFKEVRRVLKPS-GKFIMY  140 (226)
T ss_dssp             EEEEEEESCGGGCCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ceEEEEecchhhCChhHHHHHHHHHHHHcCcC-cEEEEE
Confidence            99988743321        3477899999998 998754

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.25  E-value=0.13  Score=45.23  Aligned_cols=103  Identities=15%  Similarity=0.125  Sum_probs=69.5

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc-----------CC----cEEEcCCCCC
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-----------GV----TEFVNSKNCG  257 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-----------g~----~~vv~~~~~~  257 (362)
                      +.+..+++++++||=+|+|. |..+.++|+..++.++++++.+++..+.+++.           |.    -.++..+- .
T Consensus       143 ~~~~~~l~~~~~vlD~GcG~-G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~-~  220 (328)
T d1nw3a_         143 MIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF-L  220 (328)
T ss_dssp             HHHHSCCCTTCEEEEETCTT-SHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCT-T
T ss_pred             HHHHcCCCCCCEEEEcCCCC-CHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcc-c
Confidence            56788999999999999876 88888999999988999999999877666431           21    12333222 1


Q ss_pred             CccHHHHHHhhcCCCccEEEEcCC--CH---HHHHHHHHHhccCCceEEEE
Q 018022          258 DKSVSQIIIDMTDGGADYCFECVG--LA---SLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       258 ~~~~~~~i~~~~~~g~d~vid~~g--~~---~~~~~~~~~l~~~~G~iv~~  303 (362)
                      ..++.+.+.     .+|+|+-..-  .+   ..+...++.|++| |+++..
T Consensus       221 ~~~~~~~~~-----~advi~~~~~~f~~~~~~~l~e~~r~LKpG-g~iv~~  265 (328)
T d1nw3a_         221 SEEWRERIA-----NTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSS  265 (328)
T ss_dssp             SHHHHHHHH-----HCSEEEECCTTTCHHHHHHHHHHHTTCCTT-CEEEES
T ss_pred             ccccccccC-----cceEEEEcceecchHHHHHHHHHHHhCCCC-cEEEEe
Confidence            122333332     2677774211  12   3467788899998 999875

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.18  E-value=0.014  Score=49.34  Aligned_cols=47  Identities=32%  Similarity=0.311  Sum_probs=39.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT  248 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~  248 (362)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+ ++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCC
Confidence            5889999998 9999999999999999 999999998877664 456543

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=95.17  E-value=0.038  Score=48.16  Aligned_cols=75  Identities=23%  Similarity=0.322  Sum_probs=47.1

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC--c---hHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccE
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI--S---EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADY  275 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~--~---~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~  275 (362)
                      .+|||+|+ |.+|...+..+...|+ +|+++++-  .   ++++.+.+.+--+++.-+-   .+ .+.+.++..+ ++|+
T Consensus         1 ~KILVTGatGfIGs~lv~~Ll~~g~-~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di---~~-~~~l~~~~~~~~~d~   75 (338)
T d1orra_           1 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDI---RN-KNDVTRLITKYMPDS   75 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEECCT---TC-HHHHHHHHHHHCCSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhHHHHhhccCCcEEEEccc---CC-HHHHHHHHHhcCCce
Confidence            47999998 9999999999988999 89988632  1   2333444443333443222   11 2233333333 6899


Q ss_pred             EEEcCCC
Q 018022          276 CFECVGL  282 (362)
Q Consensus       276 vid~~g~  282 (362)
                      ||.+...
T Consensus        76 Vih~aa~   82 (338)
T d1orra_          76 CFHLAGQ   82 (338)
T ss_dssp             EEECCCC
T ss_pred             EEeeccc
Confidence            9998763

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.09  E-value=0.035  Score=45.52  Aligned_cols=73  Identities=15%  Similarity=0.033  Sum_probs=47.9

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCC-EEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .+|||+|+ |.+|...+..+...|.+ .|+.+.++.++.+.+.. +... +..+-   .+ .+.+.+... ++|.|+.+.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~~-~~~d~---~~-~~~~~~~~~-~~d~vi~~a   76 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EADV-FIGDI---TD-ADSINPAFQ-GIDALVILT   76 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTTE-EECCT---TS-HHHHHHHHT-TCSEEEECC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcEE-EEeee---cc-ccccccccc-cceeeEEEE
Confidence            58999998 99999999999988863 67778888777655432 3332 22222   12 223333332 589999987


Q ss_pred             CC
Q 018022          281 GL  282 (362)
Q Consensus       281 g~  282 (362)
                      +.
T Consensus        77 ~~   78 (252)
T d2q46a1          77 SA   78 (252)
T ss_dssp             CC
T ss_pred             ee
Confidence            64

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.09  E-value=0.12  Score=42.49  Aligned_cols=103  Identities=14%  Similarity=0.068  Sum_probs=67.0

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcEEEcCCCCCCccHHHHHHhhcC
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~~i~~~~~  270 (362)
                      ....++||++||=+|+|. |..+..++...+-.+|++++.+++.++.+++    .+-...+..+.   .+. .... ...
T Consensus        50 ~~l~lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~---~~~-~~~~-~~~  123 (209)
T d1nt2a_          50 HRLKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDA---SKP-WKYS-GIV  123 (209)
T ss_dssp             CCCCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCT---TCG-GGTT-TTC
T ss_pred             ccCCCCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeec---cCc-cccc-ccc
Confidence            346789999999999866 6677778887765599999999988776643    34333333322   110 0000 011


Q ss_pred             CCccEEEEcCCCH----HHHHHHHHHhccCCceEEEEc
Q 018022          271 GGADYCFECVGLA----SLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       271 ~g~d~vid~~g~~----~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      ..+|+++..+.-.    ..+..+.+.|+++ |+++++-
T Consensus       124 ~~vd~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~  160 (209)
T d1nt2a_         124 EKVDLIYQDIAQKNQIEILKANAEFFLKEK-GEVVIMV  160 (209)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ceEEEEEecccChhhHHHHHHHHHHHhccC-CeEEEEE
Confidence            1577777654322    3467788999998 9987763

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.98  E-value=0.081  Score=44.16  Aligned_cols=96  Identities=18%  Similarity=0.285  Sum_probs=66.3

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EEEcCCCCCCccHHHHHHh
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIID  267 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~~i~~  267 (362)
                      +......++..+||=+|+|. |..+..+++ .|+ .|++++.+++-++.+++    .+.. .++..+-          .+
T Consensus        33 ~~~~~~~~~~~~iLDiGcGt-G~~~~~l~~-~~~-~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~----------~~   99 (251)
T d1wzna1          33 IFKEDAKREVRRVLDLACGT-GIPTLELAE-RGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDV----------LE   99 (251)
T ss_dssp             HHHHTCSSCCCEEEEETCTT-CHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCG----------GG
T ss_pred             HHHHhcCCCCCEEEEeCCCC-Cccchhhcc-cce-EEEEEeeccccccccccccccccccchheehhh----------hh
Confidence            44555677888999999976 777777776 578 99999999988877764    2322 2333221          12


Q ss_pred             hcCC-CccEEEEcCCC------H---HHHHHHHHHhccCCceEEE
Q 018022          268 MTDG-GADYCFECVGL------A---SLVQEAYACCRKGWGKTIV  302 (362)
Q Consensus       268 ~~~~-g~d~vid~~g~------~---~~~~~~~~~l~~~~G~iv~  302 (362)
                      +... .||+|+...+.      +   ..++.+.+.|+++ |.+++
T Consensus       100 l~~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~Lkpg-G~lii  143 (251)
T d1wzna1         100 IAFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPG-GVFIT  143 (251)
T ss_dssp             CCCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred             cccccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCC-cEEEE
Confidence            2223 79999876432      1   4577899999998 98875

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=94.96  E-value=0.069  Score=42.50  Aligned_cols=44  Identities=11%  Similarity=0.097  Sum_probs=37.9

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV  247 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~  247 (362)
                      .+|-++|.|.+|...+.-+...|+ .|++.++++++.+.+.+.++
T Consensus         3 ~nIg~IGlG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~   46 (176)
T d2pgda2           3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEA   46 (176)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTT
T ss_pred             CcEEEEeEhHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHhcc
Confidence            468899999999998888888999 99999999999988866543

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.95  E-value=0.038  Score=46.35  Aligned_cols=102  Identities=12%  Similarity=0.137  Sum_probs=64.8

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc----CCcEEEcCCCCCCccHHHHHHhhcC
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~~i~~~~~  270 (362)
                      +...+++|++||=+|+|. |..+..+|+...-..|++++.+++.++.+++.    +....+..+...+..+    .... 
T Consensus        68 ~~l~ikpG~~VLDlGcGs-G~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~----~~~~-  141 (230)
T d1g8sa_          68 KVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEY----ANIV-  141 (230)
T ss_dssp             CCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGG----TTTC-
T ss_pred             HhCCCCCCCEEEEeCEEc-CHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCccc----cccc-
Confidence            456789999999999866 67777777765444999999999888777653    2222333222011111    1111 


Q ss_pred             CCccEEEEcCCCH----HHHHHHHHHhccCCceEEEE
Q 018022          271 GGADYCFECVGLA----SLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       271 ~g~d~vid~~g~~----~~~~~~~~~l~~~~G~iv~~  303 (362)
                      ..+|+++..+--.    ..+..+.+.|+++ |++++.
T Consensus       142 ~~v~~i~~~~~~~~~~~~~l~~~~r~LKpg-G~~~i~  177 (230)
T d1g8sa_         142 EKVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA  177 (230)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ceeEEeeccccchHHHHHHHHHHHHhcccC-ceEEEE
Confidence            1456666655422    3467788899998 987765

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.83  E-value=0.016  Score=45.51  Aligned_cols=86  Identities=9%  Similarity=0.118  Sum_probs=55.5

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc-----EEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-----EFVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~-----~vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      +|+|+|+|.+|.+.+..+...|. .|..+++++++.+.....+..     ..+...      ..+.+.     .+|++|-
T Consensus         2 kI~IiGaG~iG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-----~~D~iii   69 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNESLTAN------DPDFLA-----TSDLLLV   69 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSCEEEEEEEES------CHHHHH-----TCSEEEE
T ss_pred             EEEEECcCHHHHHHHHHHHHCCC-ceEEEEcCHHHhhhhccccCCccccccccccc------hhhhhc-----ccceEEE
Confidence            68999999999998888888999 999999988755443332221     111111      122221     5899999


Q ss_pred             cCCCHHHHHH----HHHHhccCCceEEEE
Q 018022          279 CVGLASLVQE----AYACCRKGWGKTIVL  303 (362)
Q Consensus       279 ~~g~~~~~~~----~~~~l~~~~G~iv~~  303 (362)
                      ++.... ++.    +...+.++ ..++.+
T Consensus        70 ~vka~~-~~~~~~~l~~~~~~~-~~Iv~~   96 (167)
T d1ks9a2          70 TLKAWQ-VSDAVKSLASTLPVT-TPILLI   96 (167)
T ss_dssp             CSCGGG-HHHHHHHHHTTSCTT-SCEEEE
T ss_pred             eecccc-hHHHHHhhccccCcc-cEEeec
Confidence            999765 333    33444454 556655

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=94.78  E-value=0.046  Score=46.43  Aligned_cols=82  Identities=16%  Similarity=0.206  Sum_probs=52.9

Q ss_pred             CCCCEEEEECC-C--hHHHHHHHHHHHcCCCEEEEEcCCchHH-HH-HHhcCCcE---EEcCCCC-CCccHHHHHHhhcC
Q 018022          200 EVGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKF-EI-GKRFGVTE---FVNSKNC-GDKSVSQIIIDMTD  270 (362)
Q Consensus       200 ~~g~~vlI~Ga-g--~~G~~a~~la~~~g~~~vi~~~~~~~~~-~~-~~~~g~~~---vv~~~~~-~~~~~~~~i~~~~~  270 (362)
                      =+|.++||+|+ |  ++|++.++.+...|+ +|+.++++++++ +. .++++...   ..|-.+. ...++.+.+.+...
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence            36889999995 4  499999999999999 899999888775 32 34455422   1222210 00223344444333


Q ss_pred             C--CccEEEEcCCC
Q 018022          271 G--GADYCFECVGL  282 (362)
Q Consensus       271 ~--g~d~vid~~g~  282 (362)
                      .  ..|+++.+.|.
T Consensus        83 ~~~~ld~~i~~ag~   96 (268)
T d2h7ma1          83 AGNKLDGVVHSIGF   96 (268)
T ss_dssp             TTCCEEEEEECCCC
T ss_pred             cCCCcceeeecccc
Confidence            3  68999999873

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.70  E-value=0.016  Score=43.48  Aligned_cols=39  Identities=31%  Similarity=0.433  Sum_probs=33.9

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch
Q 018022          198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE  237 (362)
Q Consensus       198 ~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~  237 (362)
                      .++++.+++|+|+|.+|.-++..++.+|. +|..+.+.+.
T Consensus        26 ~~~~~~~vvIIGgG~iG~E~A~~l~~~g~-~Vtli~~~~~   64 (121)
T d1d7ya2          26 GLRPQSRLLIVGGGVIGLELAATARTAGV-HVSLVETQPR   64 (121)
T ss_dssp             HCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             hhhcCCeEEEECcchhHHHHHHHhhcccc-eEEEEeeccc
Confidence            35678999999999999999999999999 8888887653

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.68  E-value=0.014  Score=50.81  Aligned_cols=99  Identities=13%  Similarity=0.097  Sum_probs=64.2

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc----CCc-----EEEcCCCCCCccHHHHH
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVT-----EFVNSKNCGDKSVSQII  265 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~----g~~-----~vv~~~~~~~~~~~~~i  265 (362)
                      +..+.+++.+||=+|+|. |..+..+++. |+ .|+++|.+++-++.+++.    +..     ..+..     .++...-
T Consensus        50 ~~l~~~~~~~vLD~GcG~-G~~~~~la~~-g~-~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~-----~~~~~~~  121 (292)
T d1xvaa_          50 GLLRQHGCHRVLDVACGT-GVDSIMLVEE-GF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEE-----ANWLTLD  121 (292)
T ss_dssp             HHHHHTTCCEEEESSCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEE-----CCGGGHH
T ss_pred             HHhhhcCCCEEEEecCCC-cHHHHHHHHc-CC-eeeeccCchHHHHHHHHHHHhcccccccceeeeee-----ccccccc
Confidence            444556678999999866 7777778775 88 999999999888777542    211     01111     1222222


Q ss_pred             HhhcCC-CccEEEEcCCC--------------HHHHHHHHHHhccCCceEEE
Q 018022          266 IDMTDG-GADYCFECVGL--------------ASLVQEAYACCRKGWGKTIV  302 (362)
Q Consensus       266 ~~~~~~-g~d~vid~~g~--------------~~~~~~~~~~l~~~~G~iv~  302 (362)
                      ..+... .+|.|+.....              ...++.+.+.|+|+ |.+++
T Consensus       122 ~~~~~~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~  172 (292)
T d1xvaa_         122 KDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPG-GLLVI  172 (292)
T ss_dssp             HHSCCTTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEE-EEEEE
T ss_pred             cccCCCCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcC-cEEEE
Confidence            233333 89999865332              13588999999998 98876

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.58  E-value=0.014  Score=46.97  Aligned_cols=36  Identities=14%  Similarity=0.174  Sum_probs=31.7

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE  237 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~  237 (362)
                      +++|+|+|+|+.|+.++..++..|++.|+++++++.
T Consensus         4 ~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            578999999999999999999999966888887664

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=94.53  E-value=0.031  Score=49.45  Aligned_cols=46  Identities=24%  Similarity=0.239  Sum_probs=39.0

Q ss_pred             cCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH
Q 018022          197 ANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK  243 (362)
Q Consensus       197 ~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~  243 (362)
                      .-+++|.+|||+|+ |.+|...+..+...|+ .|+++.++.++.+.++
T Consensus         6 ~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~-~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQ   52 (342)
T ss_dssp             CSSCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred             CCCCCcCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCchhHHHHH
Confidence            44688999999998 9999999998888899 9999998887766554

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=94.50  E-value=0.08  Score=44.68  Aligned_cols=35  Identities=29%  Similarity=0.192  Sum_probs=30.8

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHH
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKF  239 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~  239 (362)
                      +.||+|+ +++|.+.+..+...|+ +|+.++++.++.
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~~~   38 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGA   38 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHH
Confidence            5688898 9999999999999999 999999887653

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.48  E-value=0.26  Score=39.01  Aligned_cols=96  Identities=18%  Similarity=0.139  Sum_probs=63.6

Q ss_pred             EEEEECCChHHHHHHHHHHHcC-CCEEEEE-cCC-chHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhc----------C
Q 018022          204 TVVIFGLGSIGLAVAEGARLCG-ATRIIGV-DVI-SEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT----------D  270 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g-~~~vi~~-~~~-~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~----------~  270 (362)
                      +|.|.|-|-+|+..++.+.... . .++++ +.. ++....+.+.+.+......+    . .....+..          .
T Consensus         4 rIaINGfGRIGR~v~Ral~~~~di-eiVaINd~~~~~~~~~l~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~   77 (172)
T d2czca2           4 KVGVNGYGTIGKRVAYAVTKQDDM-ELIGITKTKPDFEAYRAKELGIPVYAASEE----F-IPRFEKEGFEVAGTLNDLL   77 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEEESSCSHHHHHHHHTTCCEEESSGG----G-HHHHHHHTCCCSCBHHHHH
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCc-eEEEEecCCChHHHHHhhhcCceeeccccc----c-eeeecccCccccchhhhhh
Confidence            6889999999999888887554 5 55555 332 34455667777654432211    1 11111100          0


Q ss_pred             CCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022          271 GGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       271 ~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      .++|+||||+|.-...+.+-..+..+ -+.++++..
T Consensus        78 ~~vDvViEcTG~f~~~~~~~~hl~~G-~k~Vi~s~~  112 (172)
T d2czca2          78 EKVDIIVDATPGGIGAKNKPLYEKAG-VKAIFQGGE  112 (172)
T ss_dssp             TTCSEEEECCSTTHHHHHHHHHHHHT-CEEEECTTS
T ss_pred             ccCCEEEECCCCCCCHHHHHHHHHcC-CCEEEECCC
Confidence            16999999999887778888899997 888998864

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=94.46  E-value=0.064  Score=44.82  Aligned_cols=83  Identities=19%  Similarity=0.179  Sum_probs=57.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      -.|.+|+|.|-|.+|..+++++...|+ ++++++.+..+.+.+.. .|... ++.++            +..-..|+++=
T Consensus        37 l~g~~v~IqG~GnVG~~~a~~L~~~Ga-kvv~~d~~~~~~~~~~~~~g~~~-~~~~~------------~~~~~cDIl~P  102 (230)
T d1leha1          37 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGADA-VAPNA------------IYGVTCDIFAP  102 (230)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCEE-CCGGG------------TTTCCCSEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEeecccHHHHHHHHHhcCCcc-cCCcc------------cccccccEecc
Confidence            368899999999999999999999999 99999998888776654 55542 22211            11226788877


Q ss_pred             cCCCHHHHHHHHHHhccC
Q 018022          279 CVGLASLVQEAYACCRKG  296 (362)
Q Consensus       279 ~~g~~~~~~~~~~~l~~~  296 (362)
                      |.-....-......++..
T Consensus       103 cA~~~~I~~~~~~~l~ak  120 (230)
T d1leha1         103 CALGAVLNDFTIPQLKAK  120 (230)
T ss_dssp             CSCSCCBSTTHHHHCCCS
T ss_pred             cccccccChHHhhccCcc
Confidence            766554223445555553

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.41  E-value=0.042  Score=48.56  Aligned_cols=101  Identities=20%  Similarity=0.195  Sum_probs=65.0

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc---EEEcCCCCCCccHHHHHHhhc
Q 018022          197 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       197 ~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~~~i~~~~  269 (362)
                      ..+++|++||=.++|. |..++.+|+ .|+..|++++.+++.++.+++    .|..   +++.      .+..+.+..+.
T Consensus       141 ~~~~~g~~VLDl~~g~-G~~si~~a~-~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~------~d~~~~~~~~~  212 (324)
T d2as0a2         141 KWVQPGDRVLDVFTYT-GGFAIHAAI-AGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIV------GSAFEEMEKLQ  212 (324)
T ss_dssp             GGCCTTCEEEETTCTT-THHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE------SCHHHHHHHHH
T ss_pred             hhcCCCCeeecccCcc-cchhhhhhh-cCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeee------chhhhhhHHHH
Confidence            3468899998886633 333333443 477799999999999888764    4542   2332      33444444332


Q ss_pred             -CC-CccEEEEcCCC---------------HHHHHHHHHHhccCCceEEEEccC
Q 018022          270 -DG-GADYCFECVGL---------------ASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       270 -~~-g~d~vid~~g~---------------~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                       .+ .||+||--.+.               ...+..+++.++++ |.++.+..+
T Consensus       213 ~~~~~fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pG-G~lv~~s~s  265 (324)
T d2as0a2         213 KKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDG-GILVTCSCS  265 (324)
T ss_dssp             HTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEE-EEEEEEECC
T ss_pred             hccCCCCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCC-cEEEEEeCC
Confidence             23 89999963332               12466788899998 999988654

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.23  E-value=0.082  Score=42.85  Aligned_cols=90  Identities=17%  Similarity=0.142  Sum_probs=61.4

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .|.++.|+|.|.+|...+++++..|. ++++.++.....+.....+...   .     .++.+.+.+     .|+|..++
T Consensus        46 ~g~tvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~---~-----~~l~~ll~~-----sD~v~l~~  111 (191)
T d1gdha1          46 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASSSDEASYQATF---H-----DSLDSLLSV-----SQFFSLNA  111 (191)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHHHHTCEE---C-----SSHHHHHHH-----CSEEEECC
T ss_pred             cccceEEeecccchHHHHHHHHhhcc-ccccccccccccchhhcccccc---c-----CCHHHHHhh-----CCeEEecC
Confidence            37899999999999999999999999 9999987665444333333211   1     234444443     67887766


Q ss_pred             CCH----HHH-HHHHHHhccCCceEEEEcc
Q 018022          281 GLA----SLV-QEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       281 g~~----~~~-~~~~~~l~~~~G~iv~~G~  305 (362)
                      +-.    ..+ ...++.|+++ ..+|.++.
T Consensus       112 plt~~T~~li~~~~l~~mk~~-a~lIN~sR  140 (191)
T d1gdha1         112 PSTPETRYFFNKATIKSLPQG-AIVVNTAR  140 (191)
T ss_dssp             CCCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             CCCchHhheecHHHhhCcCCc-cEEEecCC
Confidence            532    112 3677788886 78888765

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.16  E-value=0.11  Score=44.89  Aligned_cols=99  Identities=17%  Similarity=0.172  Sum_probs=69.2

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC---------C-cEEEcCCCCCCccHHHHHHhh
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG---------V-TEFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g---------~-~~vv~~~~~~~~~~~~~i~~~  268 (362)
                      .+..++|||+|.|. |..+-.+++..+.++|.+++.+++-.+.++++-         . -+++.      .|-.+.+++.
T Consensus        78 ~~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~------~Da~~~l~~~  150 (290)
T d1xj5a_          78 IPNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI------GDGVAFLKNA  150 (290)
T ss_dssp             SSCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE------SCHHHHHHTS
T ss_pred             CCCCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEE------ccHHHHHhhc
Confidence            35567999998755 555557777777779999999999988887742         1 12332      2345666665


Q ss_pred             cCCCccEEEEcCCC----------HHHHHHHHHHhccCCceEEEEcc
Q 018022          269 TDGGADYCFECVGL----------ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       269 ~~~g~d~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ..+.||+||--...          ...++.+.+.|+++ |.++.-..
T Consensus       151 ~~~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~~  196 (290)
T d1xj5a_         151 AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQAE  196 (290)
T ss_dssp             CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             cccCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCC-cEEEEecC
Confidence            54589977753322          35688999999998 99887654

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.15  E-value=0.073  Score=43.23  Aligned_cols=89  Identities=22%  Similarity=0.323  Sum_probs=60.9

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .|.+|.|+|.|.+|...+++++..|. +|++.++..... .....+...+        .++.+.+++     .|+|+-++
T Consensus        48 ~gktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-~~~~~~~~~~--------~~l~~ll~~-----sD~i~~~~  112 (193)
T d1mx3a1          48 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSDG-VERALGLQRV--------STLQDLLFH-----SDCVTLHC  112 (193)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCTT-HHHHHTCEEC--------SSHHHHHHH-----CSEEEECC
T ss_pred             eCceEEEeccccccccceeeeecccc-ceeeccCccccc-chhhhccccc--------cchhhcccc-----CCEEEEee
Confidence            57899999999999999999999999 999998765432 2223333221        234444443     67887766


Q ss_pred             CCH----HHH-HHHHHHhccCCceEEEEcc
Q 018022          281 GLA----SLV-QEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       281 g~~----~~~-~~~~~~l~~~~G~iv~~G~  305 (362)
                      +..    ..+ ...+..|+++ ..++.+|.
T Consensus       113 plt~~T~~li~~~~l~~mk~~-a~lIN~sR  141 (193)
T d1mx3a1         113 GLNEHNHHLINDFTVKQMRQG-AFLVNTAR  141 (193)
T ss_dssp             CCCTTCTTSBSHHHHTTSCTT-EEEEECSC
T ss_pred             cccccchhhhhHHHHhccCCC-CeEEecCC
Confidence            633    112 3567788886 78888875

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=94.09  E-value=0.24  Score=38.53  Aligned_cols=137  Identities=11%  Similarity=-0.016  Sum_probs=77.4

Q ss_pred             EEEEECCChHHHH-HHHHHHHc-CCCEEEEEcCCchHHHH-HHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          204 TVVIFGLGSIGLA-VAEGARLC-GATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       204 ~vlI~Gag~~G~~-a~~la~~~-g~~~vi~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      +|.|+|+|.+|.- .+...+.. +++-+.+.+++.++.+. +++++... +       .++ +.+.   . .+|+|+.|+
T Consensus         3 ri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~-~-------~~~-~~l~---~-~~D~V~I~t   69 (164)
T d1tlta1           3 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY-A-------DSL-SSLA---A-SCDAVFVHS   69 (164)
T ss_dssp             EEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB-C-------SSH-HHHH---T-TCSEEEECS
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc-c-------ccc-hhhh---h-hcccccccc
Confidence            5789999999964 56666544 67444456677766554 55677542 1       122 2222   1 489999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEccCCCCCcccc-CHHHHH-hcCcEEEEeeccCCCccccHHHHHHHHHcCCcccce
Q 018022          281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSL-SSFEVL-HSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVPF  356 (362)
Q Consensus       281 g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~-~~~~~~-~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~~  356 (362)
                      ......+.+..++..  |.-+++-.+......+. .+..+. .++..+.-.+...+ .+...+.+.+++++|.+.-.+
T Consensus        70 p~~~h~~~~~~al~~--gk~V~~EKPla~~~~e~~~l~~~a~~~~~~~~v~~~~r~-~~~~~~~~~~~i~~g~ig~~~  144 (164)
T d1tlta1          70 STASHFDVVSTLLNA--GVHVCVDKPLAENLRDAERLVELAARKKLTLMVGFNRRF-FVGCARHFIECVQNQTVPQTA  144 (164)
T ss_dssp             CTTHHHHHHHHHHHT--TCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGG-HHHHHHHHHHHHHHTCCCTTS
T ss_pred             cchhccccccccccc--cceeeccccccCCHHHHHHHHHHHHHcCCcEEEEecccc-CHHHHHHHHHHHHCCCCCCEE
Confidence            988778888888888  56677644211111011 111222 23444432222221 223345677888888875433

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.09  E-value=0.031  Score=46.91  Aligned_cols=35  Identities=17%  Similarity=0.122  Sum_probs=31.5

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      ..++|+|+|+|+.|++++..++..|+ +|+++++++
T Consensus         3 ~~~kV~IiGaG~aGl~~A~~L~~~G~-~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGGSISGLTAALMLRDAGV-DVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCcEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            45789999999999999999999999 999999754

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.07  E-value=0.074  Score=39.32  Aligned_cols=44  Identities=20%  Similarity=0.132  Sum_probs=37.7

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE  237 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~  237 (362)
                      +.+.....++.+|+|.|+|.+|+-.+..++.+|. .|..+.+.+.
T Consensus        13 ~~~~l~~~~~~~vvVvGgG~ig~E~A~~l~~~g~-~vt~i~~~~~   56 (121)
T d1mo9a2          13 LVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGR-RTVMLVRTEP   56 (121)
T ss_dssp             HHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCT
T ss_pred             HHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcch-hheEeeccch
Confidence            4566677889999999999999999999999998 8888887653

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=93.88  E-value=0.097  Score=41.52  Aligned_cols=43  Identities=21%  Similarity=0.169  Sum_probs=37.4

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV  247 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~  247 (362)
                      +|-|+|.|.+|...+.-+...|+ .|++.+++.++.+.+.+.+.
T Consensus         3 kIGvIGlG~MG~~ma~~L~~~G~-~V~~~dr~~~~~~~l~~~~~   45 (178)
T d1pgja2           3 DVGVVGLGVMGANLALNIAEKGF-KVAVFNRTYSKSEEFMKANA   45 (178)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTT
T ss_pred             EEEEEeehHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCC
Confidence            47789999999998888888999 99999999999988876553

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.79  E-value=0.14  Score=44.53  Aligned_cols=98  Identities=18%  Similarity=0.293  Sum_probs=56.3

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHH---HHhcCCc---EEEcCCCCCCccHHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI---GKRFGVT---EFVNSKNCGDKSVSQIII  266 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~---~~~~g~~---~vv~~~~~~~~~~~~~i~  266 (362)
                      +.+...+.++++||-+|+| .|+.++.+|+ .|+++|++++.++.-...   .++.+..   .++..+-   .++     
T Consensus        27 i~~~~~~~~~~~VLDiGcG-~G~lsl~aa~-~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~---~~l-----   96 (311)
T d2fyta1          27 IYQNPHIFKDKVVLDVGCG-TGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKI---EEV-----   96 (311)
T ss_dssp             HHHCGGGTTTCEEEEETCT-TSHHHHHHHH-TTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCT---TTS-----
T ss_pred             HHhccccCCcCEEEEECCC-CCHHHHHHHH-cCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeH---HHh-----
Confidence            3344566789999999987 4666665555 577799999988754322   2333331   2343322   111     


Q ss_pred             hhcCCCccEEEEc-CC----CH----HHHHHHHHHhccCCceEE
Q 018022          267 DMTDGGADYCFEC-VG----LA----SLVQEAYACCRKGWGKTI  301 (362)
Q Consensus       267 ~~~~~g~d~vid~-~g----~~----~~~~~~~~~l~~~~G~iv  301 (362)
                      ......+|+|+.- .+    ..    ..+....+.|+++ |+++
T Consensus        97 ~~~~~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~-G~ii  139 (311)
T d2fyta1          97 HLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKG-GSVY  139 (311)
T ss_dssp             CCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEE-EEEE
T ss_pred             cCccccceEEEEeeeeeecccccccHHHHHHHHhcCCCC-cEEe
Confidence            1112379999862 11    11    2122344679997 8876

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.75  E-value=0.032  Score=47.24  Aligned_cols=34  Identities=24%  Similarity=0.368  Sum_probs=30.7

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      +++|+|+|+|+.|++++..++..|+ +|+++++++
T Consensus         1 ~KkV~IIGaG~aGL~aA~~La~~G~-~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAYKLKIHGL-NVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTSC-EEEEECSSS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            5789999999999999999999999 999998754

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.73  E-value=0.13  Score=41.19  Aligned_cols=88  Identities=25%  Similarity=0.338  Sum_probs=63.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .+.++.|+|.|.+|...+++++..|. +|++.++...+.+.. ..+...         .++.+.+++     .|+|+-++
T Consensus        43 ~~k~vgiiG~G~IG~~va~~~~~fg~-~v~~~d~~~~~~~~~-~~~~~~---------~~l~ell~~-----sDiv~~~~  106 (184)
T d1ygya1          43 FGKTVGVVGLGRIGQLVAQRIAAFGA-YVVAYDPYVSPARAA-QLGIEL---------LSLDDLLAR-----ADFISVHL  106 (184)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCHHHHH-HHTCEE---------CCHHHHHHH-----CSEEEECC
T ss_pred             cceeeeeccccchhHHHHHHhhhccc-eEEeecCCCChhHHh-hcCcee---------ccHHHHHhh-----CCEEEEcC
Confidence            57889999999999999999999999 999999776554333 333321         234444443     78888877


Q ss_pred             CCH----HHH-HHHHHHhccCCceEEEEcc
Q 018022          281 GLA----SLV-QEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       281 g~~----~~~-~~~~~~l~~~~G~iv~~G~  305 (362)
                      +-.    ..+ ...++.|+++ ..++.+|.
T Consensus       107 Plt~~T~~lin~~~l~~mk~~-a~lIN~sR  135 (184)
T d1ygya1         107 PKTPETAGLIDKEALAKTKPG-VIIVNAAR  135 (184)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred             CCCchhhhhhhHHHHhhhCCC-ceEEEecc
Confidence            643    222 3677888887 88888875

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=93.71  E-value=0.037  Score=46.95  Aligned_cols=32  Identities=22%  Similarity=0.384  Sum_probs=28.7

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      +|||+|+ |.+|...+..++..|+ .|+++++++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~~   35 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNV-EVIPTDVQD   35 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSE-EEEEECTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEeechh
Confidence            5899998 9999999999999999 999998753

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=93.63  E-value=0.029  Score=45.61  Aligned_cols=83  Identities=14%  Similarity=0.089  Sum_probs=55.0

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC--c---EEEcCCCC-CCccHHHHHHhhcCCCccEEE
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV--T---EFVNSKNC-GDKSVSQIIIDMTDGGADYCF  277 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~--~---~vv~~~~~-~~~~~~~~i~~~~~~g~d~vi  277 (362)
                      +|.|+|+|..|.+.+.++...|. .|...+++++..+.+.+-+.  .   .+-.+++. -..++.+.+.     +.|++|
T Consensus         9 KI~ViGaG~wGtAlA~~La~~g~-~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~-----~ad~ii   82 (189)
T d1n1ea2           9 KAVVFGSGAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYN-----GAEIIL   82 (189)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTEE-EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHT-----TCSCEE
T ss_pred             eEEEECCCHHHHHHHHHHHHcCC-eEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccC-----CCCEEE
Confidence            69999999999999988888888 89999999998887764321  1   00001100 0023333332     489999


Q ss_pred             EcCCCHHHHHHHHHHh
Q 018022          278 ECVGLASLVQEAYACC  293 (362)
Q Consensus       278 d~~g~~~~~~~~~~~l  293 (362)
                      -+++... ++..++.+
T Consensus        83 iavPs~~-~~~~~~~~   97 (189)
T d1n1ea2          83 FVIPTQF-LRGFFEKS   97 (189)
T ss_dssp             ECSCHHH-HHHHHHHH
T ss_pred             EcCcHHH-HHHHHHHH
Confidence            9999765 55555444

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.63  E-value=0.082  Score=45.06  Aligned_cols=96  Identities=18%  Similarity=0.104  Sum_probs=62.2

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc---EEEcCCCCCCccHHHHHHhhc
Q 018022          197 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       197 ~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~~~i~~~~  269 (362)
                      ..+++|++||-.++|. |..++.+|+.-+. +|++++.+++..+.+++    .|..   ++++.+.   .       ++.
T Consensus       103 ~~~~~g~~VlD~~aG~-G~~~l~~a~~~~~-~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~---~-------~~~  170 (260)
T d2frna1         103 KVAKPDELVVDMFAGI-GHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN---R-------DFP  170 (260)
T ss_dssp             HHCCTTCEEEETTCTT-TTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT---T-------TCC
T ss_pred             hhcCCccEEEECcceE-cHHHHHHHHhCCc-EEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcch---H-------Hhc
Confidence            3468999999987633 3444455665444 99999999998888764    3442   3444332   1       223


Q ss_pred             CC-CccEEEE-cC-CCHHHHHHHHHHhccCCceEEEEcc
Q 018022          270 DG-GADYCFE-CV-GLASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       270 ~~-g~d~vid-~~-g~~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      .. .+|.|+- .. .+...+..+++.++++ |.+.....
T Consensus       171 ~~~~~D~Ii~~~p~~~~~~l~~a~~~l~~g-G~lh~~~~  208 (260)
T d2frna1         171 GENIADRILMGYVVRTHEFIPKALSIAKDG-AIIHYHNT  208 (260)
T ss_dssp             CCSCEEEEEECCCSSGGGGHHHHHHHEEEE-EEEEEEEE
T ss_pred             cCCCCCEEEECCCCchHHHHHHHHhhcCCC-CEEEEEec
Confidence            33 6886654 22 3445688899999997 88766554

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=93.62  E-value=0.4  Score=36.93  Aligned_cols=96  Identities=22%  Similarity=0.256  Sum_probs=62.4

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHc--CCCEEEEEcCCchH---HHHHHhcCCcEEEcCCCCCCccHHHHHHh---------
Q 018022          203 STVVIFGL-GSIGLAVAEGARLC--GATRIIGVDVISEK---FEIGKRFGVTEFVNSKNCGDKSVSQIIID---------  267 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~--g~~~vi~~~~~~~~---~~~~~~~g~~~vv~~~~~~~~~~~~~i~~---------  267 (362)
                      .+|.|+|+ |.+|.-+.++.+..  .+ +|+++..+..-   .+.+++|.+..++-.++   . ..+.+.+         
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~---~-~~~~l~~~~~~~~~~v   77 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRY-QVIALTANRNVKDLADAAKRTNAKRAVIADP---S-LYNDLKEALAGSSVEA   77 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGE-EEEEEEESSCHHHHHHHHHHTTCSEEEESCG---G-GHHHHHHHTTTCSSEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCc-EEEEEEeCCCHHHHHHHHHhhccccceeccH---H-HHHHHHHHhhhccccc
Confidence            68999999 99999999999976  46 77777655543   24466788887765543   2 2222222         


Q ss_pred             ---------hcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEcc
Q 018022          268 ---------MTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       268 ---------~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                               +....+|+++.++.+...+...+..++.+  +-+.+..
T Consensus        78 ~~g~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~g--k~iaLAN  122 (150)
T d1r0ka2          78 AAGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKG--KTVALAN  122 (150)
T ss_dssp             EESHHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTT--SEEEECC
T ss_pred             ccCccchheecccccceeeeecCchhHHHHHHHHHhcC--CEEEEec
Confidence                     11124677777766666677777777773  4444443

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=93.49  E-value=0.26  Score=42.87  Aligned_cols=99  Identities=12%  Similarity=0.082  Sum_probs=67.6

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC----------cEEEcCCCCCCccHHHHHHhh
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV----------TEFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~----------~~vv~~~~~~~~~~~~~i~~~  268 (362)
                      .....+|||+|.|. |..+-.+++....++|.+++.+++-.+.++++-.          .+++.      .|..+.+++ 
T Consensus       104 ~~~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i------~Da~~~l~~-  175 (312)
T d2b2ca1         104 HPDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFC------GDGFEFLKN-  175 (312)
T ss_dssp             SSSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEEC------SCHHHHHHH-
T ss_pred             CCCCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEE------chHHHHHHh-
Confidence            35567999998765 4455577777777799999999999999887421          12332      344566655 


Q ss_pred             cCCCccEEEEcCCC----------HHHHHHHHHHhccCCceEEEEccC
Q 018022          269 TDGGADYCFECVGL----------ASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       269 ~~~g~d~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      +...||+||--...          ...++.+.+.|+++ |.++.-+..
T Consensus       176 ~~~~yDvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~-Gi~v~q~~s  222 (312)
T d2b2ca1         176 HKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQGES  222 (312)
T ss_dssp             CTTCEEEEEECCC-------------HHHHHHHHEEEE-EEEEEECCC
T ss_pred             CCCCCCEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCC-cEEEEecCC
Confidence            34489999953322          24467888999998 999887653

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.45  E-value=0.091  Score=42.38  Aligned_cols=90  Identities=16%  Similarity=0.100  Sum_probs=61.9

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .+.++.|+|.|.+|...++.++..|. +|++.++........+..+....        .++.+.++     ..|+|+-+.
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~~--------~~l~~~l~-----~sD~v~~~~  108 (188)
T d2naca1          43 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH--------ATREDMYP-----VCDVVTLNC  108 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC--------SSHHHHGG-----GCSEEEECS
T ss_pred             cccceeeccccccchhhhhhhhccCc-eEEEEeecccccccccccccccc--------CCHHHHHH-----hccchhhcc
Confidence            57899999999999999999999999 99999987665555555543321        12333222     367777766


Q ss_pred             CCHH----HH-HHHHHHhccCCceEEEEcc
Q 018022          281 GLAS----LV-QEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       281 g~~~----~~-~~~~~~l~~~~G~iv~~G~  305 (362)
                      +-..    .+ ...+..|+++ ..++.++.
T Consensus       109 plt~~T~~li~~~~l~~mk~g-a~lIN~aR  137 (188)
T d2naca1         109 PLHPETEHMINDETLKLFKRG-AYIVNTAR  137 (188)
T ss_dssp             CCCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             cccccchhhhHHHHHHhCCCC-CEEEecCc
Confidence            5331    12 3677778876 77777764

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.44  E-value=0.074  Score=43.11  Aligned_cols=39  Identities=23%  Similarity=0.351  Sum_probs=34.8

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG  242 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~  242 (362)
                      .+|.|+|+|.+|...++++...|+ +|+..+++++.++.+
T Consensus         5 kkvaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKS   43 (192)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHH
T ss_pred             EEEEEECcCHHHHHHHHHHHhCCC-cEEEEECChHHHHHH
Confidence            579999999999999999999999 999999999876554

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=93.25  E-value=0.26  Score=34.89  Aligned_cols=72  Identities=17%  Similarity=0.228  Sum_probs=51.9

Q ss_pred             CCCCCEEEEECCChHHHHH-HHHHHHcCCCEEEEEcCCc-hHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEE
Q 018022          199 VEVGSTVVIFGLGSIGLAV-AEGARLCGATRIIGVDVIS-EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYC  276 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a-~~la~~~g~~~vi~~~~~~-~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~v  276 (362)
                      .+...++.++|.|++|..+ +++++.+|+ .|.+.|... ...+.+++.|......++.   .++         .++|.|
T Consensus         5 ~~~~~~ihfiGigG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~---~~i---------~~~d~v   71 (96)
T d1p3da1           5 MRRVQQIHFIGIGGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQAGAKIYIGHAE---EHI---------EGASVV   71 (96)
T ss_dssp             CTTCCEEEEETTTSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHTTCEEEESCCG---GGG---------TTCSEE
T ss_pred             chhCCEEEEEEECHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHCCCeEEECCcc---ccC---------CCCCEE
Confidence            4566889999998888666 899999999 999999864 4556677788864443332   221         157888


Q ss_pred             EEcCCCH
Q 018022          277 FECVGLA  283 (362)
Q Consensus       277 id~~g~~  283 (362)
                      +-+.+.+
T Consensus        72 V~S~AI~   78 (96)
T d1p3da1          72 VVSSAIK   78 (96)
T ss_dssp             EECTTSC
T ss_pred             EECCCcC
Confidence            8876654

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=93.21  E-value=0.47  Score=37.61  Aligned_cols=95  Identities=20%  Similarity=0.207  Sum_probs=57.7

Q ss_pred             EEEEECCChHHHHHHHHHHHcC-CCEEEEEc-CCc-hHHHHHHhcCCcEEEcCCCC---------CCccHHHHHHhhcCC
Q 018022          204 TVVIFGLGSIGLAVAEGARLCG-ATRIIGVD-VIS-EKFEIGKRFGVTEFVNSKNC---------GDKSVSQIIIDMTDG  271 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~-~~~-~~~~~~~~~g~~~vv~~~~~---------~~~~~~~~i~~~~~~  271 (362)
                      +|.|.|-|-+|+.+++.+.... . .++++. ..+ .....+...+.......+..         ...++.....     
T Consensus         3 KVaINGfGRIGR~v~Ral~~~~di-evVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~-----   76 (178)
T d1b7go1           3 NVAVNGYGTIGKRVADAIIKQPDM-KLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIK-----   76 (178)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHH-----
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCC-EEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhh-----
Confidence            5889999999999999998764 5 666653 332 23333444443322211110         0011111111     


Q ss_pred             CccEEEEcCCCHHHHHHHHHHhccCCceEEEEcc
Q 018022          272 GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       272 g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ++|+||||+|.-...+.+-.+++.+ -++++.|.
T Consensus        77 ~vDiViecTG~f~~~e~a~~hl~~G-~KvIi~~~  109 (178)
T d1b7go1          77 TSDIVVDTTPNGVGAQYKPIYLQLQ-RNAIFQGG  109 (178)
T ss_dssp             HCSEEEECCSTTHHHHHHHHHHHTT-CEEEECTT
T ss_pred             cCCEEEECCCCcCCHHHHHHHHHcC-CEEEEECC
Confidence            4899999999876677777788775 67777654

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=93.20  E-value=0.25  Score=40.46  Aligned_cols=93  Identities=19%  Similarity=0.235  Sum_probs=62.8

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHH---cCCCEEEEEcCCchHHHHHHh----cCCc---EEEcCCCCCCccHHHHHHhh
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARL---CGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~---~g~~~vi~~~~~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~~~i~~~  268 (362)
                      ++++.+||=+|+|. |..+..+++.   .++ +|+++|.+++-++.+++    .+..   +..+.+.   .       +.
T Consensus        37 ~~~~~~vLDlGCGt-G~~~~~l~~~~~~~~~-~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~---~-------~~  104 (225)
T d1im8a_          37 VTADSNVYDLGCSR-GAATLSARRNINQPNV-KIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDI---R-------HV  104 (225)
T ss_dssp             CCTTCEEEEESCTT-CHHHHHHHHTCCCSSC-EEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCT---T-------TC
T ss_pred             cCCCCEEEEeccch-hhHHHHHHHhhcCCCC-ceEEeCCCHHHHHHHHHHhHhhcccchhhhccchh---h-------cc
Confidence            68899999999865 6666677764   466 99999999998888765    2322   2222221   1       12


Q ss_pred             cCCCccEEEEcCCC--------HHHHHHHHHHhccCCceEEEEc
Q 018022          269 TDGGADYCFECVGL--------ASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       269 ~~~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      ....+|+++-...-        ...++.+.+.|+|+ |.+++.-
T Consensus       105 ~~~~~d~i~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~li~~~  147 (225)
T d1im8a_         105 EIKNASMVILNFTLQFLPPEDRIALLTKIYEGLNPN-GVLVLSE  147 (225)
T ss_dssp             CCCSEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccceeeEEeeeccccChhhHHHHHHHHHHhCCCC-ceeeccc
Confidence            22256776664331        15588999999998 9998864

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.17  E-value=0.47  Score=37.46  Aligned_cols=89  Identities=21%  Similarity=0.207  Sum_probs=62.1

Q ss_pred             EEEEECCChHHHHHHHHHHHc-CCCEEEE-EcCCchHHHH-HHhcCCc---EEEcCCCCCCccHHHHHHhhcCCCccEEE
Q 018022          204 TVVIFGLGSIGLAVAEGARLC-GATRIIG-VDVISEKFEI-GKRFGVT---EFVNSKNCGDKSVSQIIIDMTDGGADYCF  277 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~-g~~~vi~-~~~~~~~~~~-~~~~g~~---~vv~~~~~~~~~~~~~i~~~~~~g~d~vi  277 (362)
                      ++.|+|+|.+|...+...+.. ++ .+++ .+++.++.+. +++++..   .++       .++.+.+.+   ..+|+|+
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~-~i~ai~d~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ll~~---~~iD~v~   71 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNA-TISGVASRSLEKAKAFATANNYPESTKIH-------GSYESLLED---PEIDALY   71 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCCTTCEEE-------SSHHHHHHC---TTCCEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCC-EEEEEEeCCccccccchhccccccceeec-------CcHHHhhhc---cccceee
Confidence            578999999999888888776 56 5554 5777777555 4556642   232       234333332   2699999


Q ss_pred             EcCCCHHHHHHHHHHhccCCceEEEEcc
Q 018022          278 ECVGLASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       278 d~~g~~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      .+++.....+.+..++..  |.-+++-.
T Consensus        72 I~tp~~~h~~~~~~~l~~--g~~v~~EK   97 (184)
T d1ydwa1          72 VPLPTSLHVEWAIKAAEK--GKHILLEK   97 (184)
T ss_dssp             ECCCGGGHHHHHHHHHTT--TCEEEECS
T ss_pred             ecccchhhcchhhhhhhc--cceeeccc
Confidence            999988778888888887  57777754

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=93.09  E-value=0.033  Score=44.93  Aligned_cols=84  Identities=24%  Similarity=0.329  Sum_probs=59.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .|.+|.|+|.|.+|...+++++..|. +|++.+++...       +.....       .++.+.++     ..|+|+.++
T Consensus        41 ~gk~vgIiG~G~IG~~va~~l~~~g~-~v~~~d~~~~~-------~~~~~~-------~~l~ell~-----~sDiv~~~~  100 (181)
T d1qp8a1          41 QGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTPKE-------GPWRFT-------NSLEEALR-----EARAAVCAL  100 (181)
T ss_dssp             TTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSCCC-------SSSCCB-------SCSHHHHT-----TCSEEEECC
T ss_pred             cCceEEEeccccccccceeeeecccc-ccccccccccc-------cceeee-------echhhhhh-----ccchhhccc
Confidence            47899999999999999999999999 99999876431       111110       22333332     378998877


Q ss_pred             CCH----HHH-HHHHHHhccCCceEEEEcc
Q 018022          281 GLA----SLV-QEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       281 g~~----~~~-~~~~~~l~~~~G~iv~~G~  305 (362)
                      .-.    ..+ ...++.|+++ ..++.+|.
T Consensus       101 pl~~~t~~li~~~~l~~mk~~-ailIN~~R  129 (181)
T d1qp8a1         101 PLNKHTRGLVKYQHLALMAED-AVFVNVGR  129 (181)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTT-CEEEECSC
T ss_pred             ccccccccccccceeeecccc-ceEEeccc
Confidence            643    112 4788889997 88998875

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.05  E-value=0.12  Score=38.42  Aligned_cols=42  Identities=24%  Similarity=0.376  Sum_probs=35.1

Q ss_pred             HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      .+...-..+.+|+|+|+|.+|+-+++.+..+|. +|..+.+.+
T Consensus        22 ~~~~~~~~~k~vvViGgG~iG~E~A~~l~~~g~-~Vtlie~~~   63 (123)
T d1nhpa2          22 KQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGK-KVTVIDILD   63 (123)
T ss_dssp             HHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             HHHhhccCCCEEEEECChHHHHHHHHHhhccce-EEEEEEecC
Confidence            344455667899999999999999999999999 888887654

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=93.03  E-value=0.13  Score=44.99  Aligned_cols=75  Identities=19%  Similarity=0.191  Sum_probs=47.7

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  282 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~  282 (362)
                      +|||+|+ |.+|...++.+...|...|+++++...+...+.+..--+++..+-....++.+.+.+    ++|+||.+++.
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~----~~d~Vih~a~~   77 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK----KCDVVLPLVAI   77 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH----HCSEEEECBCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHh----CCCcccccccc
Confidence            5899998 999999998888888448999987766554443322122333221012344443332    58999998875

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=93.02  E-value=0.088  Score=38.93  Aligned_cols=40  Identities=15%  Similarity=0.096  Sum_probs=34.4

Q ss_pred             hcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          196 TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       196 ~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      ...++...+|+|+|+|.+|.-++..++.+|. +|..+.+.+
T Consensus        16 ~~~l~~p~~v~IiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   55 (117)
T d1onfa2          16 FFNIKESKKIGIVGSGYIAVELINVIKRLGI-DSYIFARGN   55 (117)
T ss_dssp             HTTCCCCSEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSS
T ss_pred             HhccCCCCEEEEECCchHHHHHHHHHHhccc-cceeeehhc
Confidence            3455667899999999999999999999999 999998754

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.02  E-value=0.093  Score=45.74  Aligned_cols=32  Identities=22%  Similarity=0.148  Sum_probs=29.1

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      .++||+|+ |.+|...+..+...|+ .|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~-~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC-EEEEEECC
Confidence            57999998 9999999999999999 99999974

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=92.94  E-value=0.55  Score=36.15  Aligned_cols=99  Identities=24%  Similarity=0.226  Sum_probs=65.1

Q ss_pred             EEEEECC-ChHHHHHHHHHHHc--CCCEEEEEcCCchHH---HHHHhcCCcEEEcCCCCCCccHH---------------
Q 018022          204 TVVIFGL-GSIGLAVAEGARLC--GATRIIGVDVISEKF---EIGKRFGVTEFVNSKNCGDKSVS---------------  262 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~--g~~~vi~~~~~~~~~---~~~~~~g~~~vv~~~~~~~~~~~---------------  262 (362)
                      +|.|+|+ |.+|.-++.+.+..  .+ +|+++..+..-.   +.+++|.+..++-.++.....+.               
T Consensus         3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g   81 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLDVVRHNPEHF-RVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSG   81 (151)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTTE-EEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEES
T ss_pred             eEEEEcCCcHHHHHHHHHHHhCCCCc-EEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccC
Confidence            6899999 99999999999987  36 666665544332   34567888877665430000111               


Q ss_pred             -HHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEcc
Q 018022          263 -QIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       263 -~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                       +.+.++..- .+|+|+.++.+-..+...+..++.+  +-+.+..
T Consensus        82 ~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~g--k~iaLAN  124 (151)
T d1q0qa2          82 QQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAG--KTILLAN  124 (151)
T ss_dssp             HHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTT--CEEEECC
T ss_pred             hHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcC--CeEEEEc
Confidence             122222223 6899999888887788888888884  5555554

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=92.94  E-value=0.43  Score=39.15  Aligned_cols=92  Identities=18%  Similarity=0.165  Sum_probs=60.1

Q ss_pred             CEEEEECCChHHHH-HHHHHHH-cCCCEEEEEcCCchHHHH-HHhcCCc--EEEcCCCCCCccHHHHHHhhcCC-CccEE
Q 018022          203 STVVIFGLGSIGLA-VAEGARL-CGATRIIGVDVISEKFEI-GKRFGVT--EFVNSKNCGDKSVSQIIIDMTDG-GADYC  276 (362)
Q Consensus       203 ~~vlI~Gag~~G~~-a~~la~~-~g~~~vi~~~~~~~~~~~-~~~~g~~--~vv~~~~~~~~~~~~~i~~~~~~-g~d~v  276 (362)
                      =+|.|+|+|.+|.- .+...+. -+++.+.+++++.++.+. ++++|..  .+..+++     +    .++... .+|+|
T Consensus        34 iriaiIG~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d-----~----~ell~~~~iD~V  104 (221)
T d1h6da1          34 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN-----F----DKIAKDPKIDAV  104 (221)
T ss_dssp             EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSS-----G----GGGGGCTTCCEE
T ss_pred             EEEEEEcCcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCc-----h----hhhcccccceee
Confidence            36889999999963 4444343 367344466777777655 4567653  2333322     2    222222 79999


Q ss_pred             EEcCCCHHHHHHHHHHhccCCceEEEEcc
Q 018022          277 FECVGLASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       277 id~~g~~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      +.++........+..++..  |.-+++-.
T Consensus       105 ~I~tp~~~H~~~~~~al~~--gk~v~~EK  131 (221)
T d1h6da1         105 YIILPNSLHAEFAIRAFKA--GKHVMCEK  131 (221)
T ss_dssp             EECSCGGGHHHHHHHHHHT--TCEEEECS
T ss_pred             eeccchhhhhhHHHHhhhc--chhhhcCC
Confidence            9999988778889999987  57777754

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=92.86  E-value=1  Score=34.13  Aligned_cols=96  Identities=6%  Similarity=-0.054  Sum_probs=60.4

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHH-HHH---HhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEE
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKF-EIG---KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCF  277 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~-~~~---~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vi  277 (362)
                      .+.++|.|.|.+|...++.+...|. .+++++.++++. +.+   ...|... +.-+.    .-.+.+++..-..+|.++
T Consensus         3 knHiII~G~g~~g~~l~~~L~~~~~-~v~vId~d~~~~~~~~~~~~~~~~~v-i~Gd~----~d~~~L~~a~i~~a~~vi   76 (153)
T d1id1a_           3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADV-IPGDS----NDSSVLKKAGIDRCRAIL   76 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEE-EESCT----TSHHHHHHHTTTTCSEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCC-CEEEEeccchhHHHHHHHhhcCCcEE-EEccC----cchHHHHHhccccCCEEE
Confidence            4679999999999999999999999 788888777542 223   3335443 33222    123444444323789999


Q ss_pred             EcCCCHHHH---HHHHHHhccCCceEEEEc
Q 018022          278 ECVGLASLV---QEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       278 d~~g~~~~~---~~~~~~l~~~~G~iv~~G  304 (362)
                      -+++....-   -...+.+.+. -+++..-
T Consensus        77 ~~~~~d~~n~~~~~~~r~~~~~-~~iia~~  105 (153)
T d1id1a_          77 ALSDNDADNAFVVLSAKDMSSD-VKTVLAV  105 (153)
T ss_dssp             ECSSCHHHHHHHHHHHHHHTSS-SCEEEEC
T ss_pred             EccccHHHHHHHHHHHHHhCCC-CceEEEE
Confidence            999876422   2233445554 5666553

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.84  E-value=0.081  Score=41.85  Aligned_cols=39  Identities=26%  Similarity=0.286  Sum_probs=33.8

Q ss_pred             EEEEE-CCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH
Q 018022          204 TVVIF-GLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK  243 (362)
Q Consensus       204 ~vlI~-Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~  243 (362)
                      +|.|+ |+|.+|.+.++.+...|+ +|++.+|++++.+.+.
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~-~V~l~~R~~e~~~~l~   41 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAKA   41 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHH
Confidence            57888 569999999999999999 9999999998876653

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.83  E-value=0.23  Score=38.18  Aligned_cols=39  Identities=18%  Similarity=0.222  Sum_probs=31.7

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK  243 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~  243 (362)
                      +|-|+|.|.+|.+.+.-++..|+ .+++.++.+++...++
T Consensus         2 kIgiIG~G~mG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~   40 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEGRSPSTIER   40 (152)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTC-EEEECCTTCCHHHHHH
T ss_pred             EEEEEcHHHHHHHHHHHHHHCCC-eEEEEcCchhHHHHHh
Confidence            57889999999999999999999 8888877766554443

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.82  E-value=1.1  Score=33.66  Aligned_cols=30  Identities=20%  Similarity=0.293  Sum_probs=21.8

Q ss_pred             EEEEECC-ChHHHHHHHHHHH-cCCCEEEEEc
Q 018022          204 TVVIFGL-GSIGLAVAEGARL-CGATRIIGVD  233 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~-~g~~~vi~~~  233 (362)
                      +|.|.|+ |-+|.+.++.... .+++-+-+++
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d   32 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELD   32 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEEC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            5889998 9999998887665 5663444444

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=92.81  E-value=0.24  Score=39.65  Aligned_cols=39  Identities=23%  Similarity=0.342  Sum_probs=34.3

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG  242 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~  242 (362)
                      .+|.|+|+|.+|...+.++...|+ +|+..+.+++.++.+
T Consensus         5 ~~vaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           5 KQAAVLGAGIMGGGIAYQSASKGT-PILMKDINEHGIEQG   43 (186)
T ss_dssp             SSEEEECCHHHHHHHHHHHHHTTC-CEEEECSSHHHHHHH
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHhhh
Confidence            468999999999999888889999 999999998876654

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=92.80  E-value=0.29  Score=41.49  Aligned_cols=95  Identities=16%  Similarity=0.160  Sum_probs=64.9

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHc-CCCEEEEEcCCchHHHHHHhcCC-cEEEcCCCCCCccHHHHHHhhcCCCccE
Q 018022          198 NVEVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDGGADY  275 (362)
Q Consensus       198 ~~~~g~~vlI~Gag~~G~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~i~~~~~~g~d~  275 (362)
                      ...++.+||=+|+|. |..+..+++.. +. +++++|.+++-++.+++-.. ..++..+.   .++     .+.++.+|+
T Consensus        81 ~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~d~---~~l-----~~~~~sfD~  150 (268)
T d1p91a_          81 LDDKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASS---HRL-----PFSDTSMDA  150 (268)
T ss_dssp             SCTTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCT---TSC-----SBCTTCEEE
T ss_pred             cCCCCCEEEEeCCCC-cHHHHHHHHHCCCC-EEEEecchHhhhhhhhcccccccceeeeh---hhc-----cCCCCCEEE
Confidence            346778999899866 66666777765 45 99999999998888876432 22222221   111     122337999


Q ss_pred             EEEcCCCHHHHHHHHHHhccCCceEEEEc
Q 018022          276 CFECVGLASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       276 vid~~g~~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      |+.... ...++++.+.|+++ |.+++..
T Consensus       151 v~~~~~-~~~~~e~~rvLkpg-G~l~~~~  177 (268)
T d1p91a_         151 IIRIYA-PCKAEELARVVKPG-GWVITAT  177 (268)
T ss_dssp             EEEESC-CCCHHHHHHHEEEE-EEEEEEE
T ss_pred             EeecCC-HHHHHHHHHHhCCC-cEEEEEe
Confidence            996544 44488999999998 9998774

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=92.79  E-value=0.075  Score=46.73  Aligned_cols=77  Identities=12%  Similarity=0.109  Sum_probs=48.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHH-HHHhc---CCcEEEcCCCCCCccHHHHHHhhcCC-Ccc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE-IGKRF---GVTEFVNSKNCGDKSVSQIIIDMTDG-GAD  274 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~-~~~~~---g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d  274 (362)
                      .+.+|||+|+ |.+|...++.+...|+ .|++++++..+.. +++..   ..-+.+..+-   .+ .+.+.+.... .+|
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl---~d-~~~l~~~~~~~~~~   81 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEIGDI---RD-QNKLLESIREFQPE   81 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEECCT---TC-HHHHHHHHHHHCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCccHHHHhhhhcccCCeEEEeec---cC-hHhhhhhhhhchhh
Confidence            4689999998 9999999999999999 8999998765422 22221   1122222211   11 2223333323 689


Q ss_pred             EEEEcCCC
Q 018022          275 YCFECVGL  282 (362)
Q Consensus       275 ~vid~~g~  282 (362)
                      +|+.+++.
T Consensus        82 ~v~~~aa~   89 (356)
T d1rkxa_          82 IVFHMAAQ   89 (356)
T ss_dssp             EEEECCSC
T ss_pred             hhhhhhcc
Confidence            99998875

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=92.64  E-value=0.16  Score=40.83  Aligned_cols=96  Identities=19%  Similarity=0.224  Sum_probs=61.3

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc--EEEcCCCCCCccHHHHHHhhcC
Q 018022          197 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       197 ~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~--~vv~~~~~~~~~~~~~i~~~~~  270 (362)
                      +...++.+||=+|+| .|..+..+++ .|+ +|++++.+++-++.+++    .+.+  ++...+-   .++      ...
T Consensus        26 ~~~~~~grvLDiGcG-~G~~~~~la~-~g~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~---~~~------~~~   93 (198)
T d2i6ga1          26 AKVVAPGRTLDLGCG-NGRNSLYLAA-NGY-DVTAWDKNPASMANLERIKAAEGLDNLQTDLVDL---NTL------TFD   93 (198)
T ss_dssp             HTTSCSCEEEEETCT-TSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCT---TTC------CCC
T ss_pred             cccCCCCcEEEECCC-CCHHHHHHHH-Hhh-hhccccCcHHHHHHHHHHhhhccccchhhhheec---ccc------ccc
Confidence            343344589999997 5777777765 588 99999999988776653    3443  2222211   110      012


Q ss_pred             CCccEEEEcCC-----CH---HHHHHHHHHhccCCceEEEEcc
Q 018022          271 GGADYCFECVG-----LA---SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       271 ~g~d~vid~~g-----~~---~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      +.||+|+...-     .+   ..++.+.+.|+++ |.++++..
T Consensus        94 ~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~  135 (198)
T d2i6ga1          94 GEYDFILSTVVMMFLEAQTIPGLIANMQRCTKPG-GYNLIVAA  135 (198)
T ss_dssp             CCEEEEEEESCGGGSCTTHHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             ccccEEEEeeeeecCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            37999986331     11   3577888899998 99887643

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=92.62  E-value=0.31  Score=41.61  Aligned_cols=98  Identities=13%  Similarity=0.065  Sum_probs=68.2

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC-----C-----cEEEcCCCCCCccHHHHHHhh
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-----V-----TEFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g-----~-----~~vv~~~~~~~~~~~~~i~~~  268 (362)
                      ....++|||+|.|. |..+..+++..+.++|.+++.+++-.+.++++-     +     -+++..      |..+.+++ 
T Consensus        73 ~~~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~------D~~~~l~~-  144 (274)
T d1iy9a_          73 HPNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD------DGFMHIAK-  144 (274)
T ss_dssp             SSSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES------CSHHHHHT-
T ss_pred             cCCcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEec------hHHHHHhh-
Confidence            35668999998765 555667777777779999999999988887742     1     123332      33445554 


Q ss_pred             cCCCccEEEEcCC----------CHHHHHHHHHHhccCCceEEEEcc
Q 018022          269 TDGGADYCFECVG----------LASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       269 ~~~g~d~vid~~g----------~~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      +...+|+||--..          +....+.+.+.|+++ |.++.-+.
T Consensus       145 ~~~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~-Gv~v~q~~  190 (274)
T d1iy9a_         145 SENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQTD  190 (274)
T ss_dssp             CCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEECC
T ss_pred             cCCCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCC-ceEEEecC
Confidence            2338999975322          235688999999998 99887654

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.62  E-value=0.14  Score=44.66  Aligned_cols=94  Identities=17%  Similarity=0.177  Sum_probs=55.6

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHH---HHHhcCCc---EEEcCCCCCCccHHHHHHhhcC
Q 018022          197 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE---IGKRFGVT---EFVNSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       197 ~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~---~~~~~g~~---~vv~~~~~~~~~~~~~i~~~~~  270 (362)
                      ..+.+|++||-+|+|. |++++.+|+ .|+.+|++++.++.-..   .+++.+..   .++..+.   .++     +...
T Consensus        29 ~~~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~---~~~-----~~~~   98 (316)
T d1oria_          29 RHLFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKV---EEV-----ELPV   98 (316)
T ss_dssp             HHHHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCT---TTC-----CCSS
T ss_pred             cccCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccH---HHc-----cccc
Confidence            3456899999999875 666665555 68779999998764222   22233432   2333322   111     1112


Q ss_pred             CCccEEEEcCCC---------HHHHHHHHHHhccCCceEE
Q 018022          271 GGADYCFECVGL---------ASLVQEAYACCRKGWGKTI  301 (362)
Q Consensus       271 ~g~d~vid~~g~---------~~~~~~~~~~l~~~~G~iv  301 (362)
                      +.+|+|+...-.         +..+....+.|+++ |+++
T Consensus        99 ~~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~-G~ii  137 (316)
T d1oria_          99 EKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPD-GLIF  137 (316)
T ss_dssp             SCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred             ceeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCC-eEEE
Confidence            278998753221         23345667899997 8875

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=92.54  E-value=0.31  Score=40.33  Aligned_cols=104  Identities=15%  Similarity=0.225  Sum_probs=67.9

Q ss_pred             hcCCCCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHh----cCCcEEEcCCCCCCccHHHHHHhh--
Q 018022          196 TANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDM--  268 (362)
Q Consensus       196 ~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~~i~~~--  268 (362)
                      ..+.....+||=+|.+ +|..++.+|+.+.. .+++.++.+++..+.+++    .|...-+.-..   .+..+.+.++  
T Consensus        54 L~~~~~~k~iLEiGT~-~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~---g~a~~~L~~l~~  129 (227)
T d1susa1          54 LLKLINAKNTMEIGVY-TGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFRE---GPALPVLDEMIK  129 (227)
T ss_dssp             HHHHHTCCEEEEECCG-GGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE---SCHHHHHHHHHH
T ss_pred             HHHhcCCCcEEEecch-hhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeee---hHHHHHHHHHHh
Confidence            3444566899999864 37777788877642 299999999998877764    56532121111   2334444444  


Q ss_pred             ---cCCCccEEEEcCCCH---HHHHHHHHHhccCCceEEEEc
Q 018022          269 ---TDGGADYCFECVGLA---SLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       269 ---~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~G  304 (362)
                         ..+.||.||--....   ..++.+++.|+++ |.++.=-
T Consensus       130 ~~~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~g-Giii~DN  170 (227)
T d1susa1         130 DEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDN  170 (227)
T ss_dssp             CGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEET
T ss_pred             ccccCCceeEEEeccchhhhHHHHHHHHhhcCCC-cEEEEcc
Confidence               233799998755543   4477899999997 8877653

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=92.53  E-value=0.073  Score=45.74  Aligned_cols=38  Identities=24%  Similarity=0.253  Sum_probs=33.0

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       198 ~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      ......+|+|+|+|+.|+.++..++..|. +|++++.++
T Consensus        26 ~~~~pkkV~IIGaG~aGLsaA~~L~~~G~-~V~vlE~~~   63 (370)
T d2iida1          26 ATSNPKHVVIVGAGMAGLSAAYVLAGAGH-QVTVLEASE   63 (370)
T ss_dssp             CCSSCCEEEEECCBHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            44566799999999999999999999999 999998754

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.48  E-value=0.1  Score=38.37  Aligned_cols=37  Identities=24%  Similarity=0.407  Sum_probs=31.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE  237 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~  237 (362)
                      +...+++|+|+|.+|+-+++.+..+|. +|..+.+.+.
T Consensus        20 ~~p~~v~IiGgG~ig~E~A~~l~~~G~-~Vtlve~~~~   56 (117)
T d1ebda2          20 EVPKSLVVIGGGYIGIELGTAYANFGT-KVTILEGAGE   56 (117)
T ss_dssp             SCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             hcCCeEEEECCCccceeeeeeeccccc-EEEEEEecce
Confidence            345789999999999999999999999 8888876654

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=92.45  E-value=0.19  Score=43.91  Aligned_cols=72  Identities=19%  Similarity=0.273  Sum_probs=44.3

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC----chHHHHHHh---cCCcEEEcCCCCCCccHHHHHHhhcCC-Ccc
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI----SEKFEIGKR---FGVTEFVNSKNCGDKSVSQIIIDMTDG-GAD  274 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~----~~~~~~~~~---~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d  274 (362)
                      +|||+|+ |.+|...+..+...|+ .|+++++.    .......+.   -++. ++..+-   .+ .+.+.+.... ++|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl---~d-~~~l~~~~~~~~~d   75 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPT-FVEGDI---RN-EALMTEILHDHAID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCE-EEECCT---TC-HHHHHHHHHHTTCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcchhhHHHHHhhcCCCCE-EEEeec---CC-HHHHHHHHhccCCC
Confidence            5999998 9999999999999998 88888642    222333222   2333 232221   11 2233333222 799


Q ss_pred             EEEEcCC
Q 018022          275 YCFECVG  281 (362)
Q Consensus       275 ~vid~~g  281 (362)
                      +||.+++
T Consensus        76 ~ViHlAa   82 (338)
T d1udca_          76 TVIHFAG   82 (338)
T ss_dssp             EEEECCS
T ss_pred             EEEECCC
Confidence            9999875

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.45  E-value=0.34  Score=38.75  Aligned_cols=98  Identities=13%  Similarity=0.121  Sum_probs=63.1

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc----EEEcCCCCCCccHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT----EFVNSKNCGDKSVSQI  264 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~----~vv~~~~~~~~~~~~~  264 (362)
                      +.+.....++++||=+|+|. |..++.+++ .+. +|++++.+++..+.+++    .+..    +++..+-      .+ 
T Consensus        44 Li~~l~~~~~~~VLDiGcG~-G~~~~~la~-~~~-~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~------~~-  113 (194)
T d1dusa_          44 LVENVVVDKDDDILDLGCGY-GVIGIALAD-EVK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDL------YE-  113 (194)
T ss_dssp             HHHHCCCCTTCEEEEETCTT-SHHHHHHGG-GSS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECST------TT-
T ss_pred             HHHhCCcCCCCeEEEEeecC-ChhHHHHHh-hcc-ccceeeeccccchhHHHHHHHhCCccceEEEEEcch------hh-
Confidence            45667888999999998755 455555555 445 99999999888777764    2321    2332221      11 


Q ss_pred             HHhhcCCCccEEEEcCC---CH----HHHHHHHHHhccCCceEEEE
Q 018022          265 IIDMTDGGADYCFECVG---LA----SLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       265 i~~~~~~g~d~vid~~g---~~----~~~~~~~~~l~~~~G~iv~~  303 (362)
                        ...++.||+|+-...   +.    ..++.+.+.|+++ |+++++
T Consensus       114 --~~~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  156 (194)
T d1dusa_         114 --NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN-GEIWVV  156 (194)
T ss_dssp             --TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             --hhccCCceEEEEcccEEecchhhhhHHHHHHHhcCcC-cEEEEE
Confidence              122237999997322   22    3467788999998 988664

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=92.41  E-value=0.34  Score=42.31  Aligned_cols=38  Identities=16%  Similarity=0.014  Sum_probs=30.2

Q ss_pred             CCEEEEECC---ChHHHHHHHHHHHcCCCEEEEEcCCchHHH
Q 018022          202 GSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISEKFE  240 (362)
Q Consensus       202 g~~vlI~Ga---g~~G~~a~~la~~~g~~~vi~~~~~~~~~~  240 (362)
                      ++..||+|+   .++|++.++.+...|+ +|+.+.+......
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA-~V~i~~~~~~~~~   42 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNV-KIIFGIWPPVYNI   42 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEECGGGHHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCC-EEEEEeCchhhhh
Confidence            567889995   3899999999999999 8888876665433

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=92.40  E-value=0.15  Score=45.01  Aligned_cols=33  Identities=24%  Similarity=0.241  Sum_probs=28.1

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      ..|||+|+ |.+|...+..+...|+ .|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~-~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence            46889998 9999999999999999 999999854

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=92.39  E-value=0.1  Score=38.21  Aligned_cols=34  Identities=29%  Similarity=0.532  Sum_probs=30.8

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE  237 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~  237 (362)
                      .+|.|+|+|-+|++.++.|+.+|+ ++++.+.+++
T Consensus        12 ~kigIlGgGQL~rMla~aA~~lG~-~v~v~d~~~~   45 (111)
T d1kjqa2          12 TRVMLLGSGELGKEVAIECQRLGV-EVIAVDRYAD   45 (111)
T ss_dssp             CEEEEESCSHHHHHHHHHHHTTTC-EEEEEESSTT
T ss_pred             CEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcCCCC
Confidence            469999999999999999999999 9999987655

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.37  E-value=0.09  Score=43.64  Aligned_cols=38  Identities=21%  Similarity=0.215  Sum_probs=33.6

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE  237 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~  237 (362)
                      .+.+.+|+|+|+|+.|+.++..++.+|+ .|++++.+++
T Consensus        46 ~~~~k~VvIIGaGpAGl~aA~~l~~~G~-~v~l~E~~~~   83 (233)
T d1djqa3          46 TKNKDSVLIVGAGPSGSEAARVLMESGY-TVHLTDTAEK   83 (233)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             ccCCceEEEEcccHHHHHHHHHHHHhcc-ceeeEeeccc
Confidence            3577899999999999999999999999 8999987664

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=92.29  E-value=0.22  Score=40.45  Aligned_cols=86  Identities=20%  Similarity=0.181  Sum_probs=59.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .|.+|.|+|.|.+|...+++++..|. +|++.++...+..   .....    .     .++.+.+.+     .|++.-++
T Consensus        44 ~~ktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~---~~~~~----~-----~~l~~l~~~-----~D~v~~~~  105 (199)
T d1dxya1          44 GQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYPMKGD---HPDFD----Y-----VSLEDLFKQ-----SDVIDLHV  105 (199)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSSC---CTTCE----E-----CCHHHHHHH-----CSEEEECC
T ss_pred             cceeeeeeecccccccccccccccce-eeeccCCccchhh---hcchh----H-----HHHHHHHHh-----cccceeee
Confidence            46899999999999999999999999 9999987543210   00111    1     233333333     68888876


Q ss_pred             CCHH----HH-HHHHHHhccCCceEEEEcc
Q 018022          281 GLAS----LV-QEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       281 g~~~----~~-~~~~~~l~~~~G~iv~~G~  305 (362)
                      ....    .+ ...+..|+++ ..++.+|.
T Consensus       106 plt~~T~~li~~~~l~~mk~~-a~lIN~aR  134 (199)
T d1dxya1         106 PGIEQNTHIINEAAFNLMKPG-AIVINTAR  134 (199)
T ss_dssp             CCCGGGTTSBCHHHHHHSCTT-EEEEECSC
T ss_pred             cccccccccccHHHhhccCCc-eEEEeccc
Confidence            6432    12 4678889997 88888875

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=92.26  E-value=0.057  Score=44.37  Aligned_cols=33  Identities=21%  Similarity=0.419  Sum_probs=28.9

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      +|+|+|+|+.|+.++..++..|+++|+++++++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            589999999999999999999975799998764

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=92.23  E-value=0.79  Score=35.95  Aligned_cols=95  Identities=22%  Similarity=0.274  Sum_probs=61.1

Q ss_pred             EEEEECCChHHHHHHHHHHHcC-CCEEEEEcC-C-chHHHHHHhcCCcEEEcCCCC----------CCccHHHHHHhhcC
Q 018022          204 TVVIFGLGSIGLAVAEGARLCG-ATRIIGVDV-I-SEKFEIGKRFGVTEFVNSKNC----------GDKSVSQIIIDMTD  270 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~-~-~~~~~~~~~~g~~~vv~~~~~----------~~~~~~~~i~~~~~  270 (362)
                      +|.|.|-|-+|+.+.+++...+ . .++++.. . ......+.+.+.+......+.          ...++.+..     
T Consensus         3 ~VgINGfGRIGR~v~R~l~~~~di-~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~-----   76 (171)
T d1cf2o1           3 AVAINGYGTVGKRVADAIAQQDDM-KVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDML-----   76 (171)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSSSE-EEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHH-----
T ss_pred             EEEEEcCcHHHHHHHHHHHhCCCc-eEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhh-----
Confidence            6889999999999999887665 5 5555543 2 244455666665543322110          000111111     


Q ss_pred             CCccEEEEcCCCHHHHHHHHHHhccCCceEEEEcc
Q 018022          271 GGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       271 ~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      .++|+||||+|.-...+.+-..+..+ -+.++.+.
T Consensus        77 ~~vDvViEcTG~f~~~~~~~~hl~~G-~K~vi~~~  110 (171)
T d1cf2o1          77 DEADIVIDCTPEGIGAKNLKMYKEKG-IKAIFQGG  110 (171)
T ss_dssp             HTCSEEEECCSTTHHHHHHHHHHHTT-CEEEECTT
T ss_pred             cCCCEEEEccCCCCCHHHHHHHHHcC-CCEEEECC
Confidence            15999999999877677888888886 78787765

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=92.09  E-value=1.6  Score=35.02  Aligned_cols=146  Identities=13%  Similarity=0.058  Sum_probs=82.8

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEE-cCCchH---------HHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCc
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGV-DVISEK---------FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGA  273 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~-~~~~~~---------~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~  273 (362)
                      ++++.|.+.+|..+++.+...|. .|.++ +..+++         .+++++.+... +...+.+++.+.+.+.+.   .+
T Consensus         2 kiv~~~~~~~g~~~l~~L~~~g~-~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~-~~~~~~~~~~~~~~i~~~---~~   76 (203)
T d2blna2           2 KTVVFAYHDMGCLGIEALLAAGY-EISAIFTHTDNPGEKAFYGSVARLAAERGIPV-YAPDNVNHPLWVERIAQL---SP   76 (203)
T ss_dssp             EEEEEECHHHHHHHHHHHHHTTC-EEEEEECCCC------CCCCHHHHHHHHTCCE-ECCSCCCSHHHHHHHHHT---CC
T ss_pred             eEEEEecCHHHHHHHHHHHHCCC-CEEEEEcCCCCCCcccccCHHHHHHHHcCCcc-eecccccchhhhhhhhhh---cc
Confidence            57788888899999999998998 56544 332221         34556667653 333332235566666554   58


Q ss_pred             cEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCCc-----------------
Q 018022          274 DYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA-----------------  336 (362)
Q Consensus       274 d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~-----------------  336 (362)
                      |+++-+....- +..-+-...+. |.+.+-....+...-.-+..-.+..+....|..+.....                 
T Consensus        77 Dlii~~g~~~i-i~~~il~~~~~-~~iN~H~slLP~yrG~~p~~wai~~g~~~~G~Tih~i~~~iD~G~Il~q~~~~i~~  154 (203)
T d2blna2          77 DVIFSFYYRHL-IYDEILQLAPA-GAFNLHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAP  154 (203)
T ss_dssp             SEEEEESCCSC-CCHHHHTTCTT-CEEEEESSCTTTTEESCHHHHHHHTTCSEEEEEEEECCSSTTCSCEEEEEEEECCT
T ss_pred             cceeeeecccc-hhcccchhhHH-HHHHHhhhcchhhhhhhhhhhhhhcccccccceeEEeeccCCCccceeeccccccc
Confidence            99987765433 33333334453 677777654433333333333334444444554332110                 


Q ss_pred             ---------------cccHHHHHHHHHcCCcccce
Q 018022          337 ---------------KSDIPILLKRYMDKWSYVPF  356 (362)
Q Consensus       337 ---------------~~~l~~~l~~~~~g~l~~~~  356 (362)
                                     .+.+.++++.+.+|++.+..
T Consensus       155 ~~t~~~l~~k~~~~~~~l~~~~l~~i~~g~~~~~~  189 (203)
T d2blna2         155 DDIAITLHHKLCHAARQLLEQTLPAIKHGNILEIA  189 (203)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCBC
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCceec
Confidence                           13467778888888877654

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.06  E-value=0.39  Score=41.22  Aligned_cols=100  Identities=13%  Similarity=0.119  Sum_probs=67.3

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC---------C-cEEEcCCCCCCccHHHHHH
Q 018022          197 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG---------V-TEFVNSKNCGDKSVSQIII  266 (362)
Q Consensus       197 ~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g---------~-~~vv~~~~~~~~~~~~~i~  266 (362)
                      ......++|||+|.|. |..+-.+++..+..+|.+++-+++-.+.++++-         . .+++.      .|..+.++
T Consensus        74 ~~~~~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~------~Da~~~l~  146 (285)
T d2o07a1          74 CSHPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV------GDGFEFMK  146 (285)
T ss_dssp             TTSSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHHH
T ss_pred             hhCcCcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEE------ccHHHHHh
Confidence            3445678999998755 455556777777779999999999888887642         1 12332      23455555


Q ss_pred             hhcCCCccEEEEcCCCH----------HHHHHHHHHhccCCceEEEEcc
Q 018022          267 DMTDGGADYCFECVGLA----------SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       267 ~~~~~g~d~vid~~g~~----------~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      + +...+|+||--.-.+          ..++.+.+.|+++ |.++.-+.
T Consensus       147 ~-~~~~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~~  193 (285)
T d2o07a1         147 Q-NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKED-GVLCCQGE  193 (285)
T ss_dssp             T-CSSCEEEEEEECC-----------CHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             c-CCCCCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCC-CeEEEecc
Confidence            4 334899998533221          4477888999998 99887654

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.95  E-value=0.086  Score=44.25  Aligned_cols=34  Identities=26%  Similarity=0.348  Sum_probs=29.8

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE  237 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~  237 (362)
                      +|+|+|+|+.|++++.+++..|+..|.+++++++
T Consensus         3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            6899999999999999999999768888887653

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=91.93  E-value=0.12  Score=44.08  Aligned_cols=37  Identities=16%  Similarity=0.168  Sum_probs=28.1

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC-chHHHH
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI-SEKFEI  241 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~-~~~~~~  241 (362)
                      .+||+|+ +++|++.++.+...|+ +|+.++++ +++.+.
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~   42 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANA   42 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCCHHHHHH
Confidence            4678887 9999999999999999 77766554 444433

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.90  E-value=0.41  Score=42.48  Aligned_cols=31  Identities=32%  Similarity=0.302  Sum_probs=28.0

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEc
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD  233 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~  233 (362)
                      |.+|||+|+ |.+|...+..+...|+ .|+++|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~-~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNY-EVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEe
Confidence            679999998 9999999999999999 999997

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=91.88  E-value=0.28  Score=41.58  Aligned_cols=75  Identities=19%  Similarity=0.196  Sum_probs=46.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCch-----HHH---HHHhcCCcEEEcCCCCCCccHHHHHHhhcCC
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-----KFE---IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG  271 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~-----~~~---~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~  271 (362)
                      ...+|||+|+ |.+|...+..+...|. .|+++.|+..     +.+   .+...++. ++..+-   .+ .+.+.+... 
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~~v~-~v~~d~---~d-~~~~~~~~~-   74 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEVVSNIDKVQMLLYFKQLGAK-LIEASL---DD-HQRLVDALK-   74 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCCSSCHHHHHHHHHHHTTTCE-EECCCS---SC-HHHHHHHHT-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCCcccchhHHHHHhhhccCCcE-EEEeec---cc-chhhhhhcc-
Confidence            3467999998 9999999999888998 8888887642     222   23344544 332221   12 223333332 


Q ss_pred             CccEEEEcCCC
Q 018022          272 GADYCFECVGL  282 (362)
Q Consensus       272 g~d~vid~~g~  282 (362)
                      +.+.++.+.+.
T Consensus        75 ~~~~~~~~~~~   85 (312)
T d1qyda_          75 QVDVVISALAG   85 (312)
T ss_dssp             TCSEEEECCCC
T ss_pred             Ccchhhhhhhh
Confidence            57788877654

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=91.83  E-value=0.15  Score=42.67  Aligned_cols=34  Identities=29%  Similarity=0.406  Sum_probs=30.8

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      ..+|+|+|+|++|..++..+.+.|+.+++.+|.+
T Consensus        30 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          30 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            4689999999999999999999999999998743

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=91.80  E-value=0.05  Score=42.08  Aligned_cols=83  Identities=7%  Similarity=-0.116  Sum_probs=51.2

Q ss_pred             EEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHH
Q 018022          206 VIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASL  285 (362)
Q Consensus       206 lI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~  285 (362)
                      -++|+|.+|.+.+..++. +...+.+..|+.++.+.+.+.+.....+..+            .. ...|+||-|+.... 
T Consensus         3 gfIG~G~mg~~l~~~L~~-~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~------------~~-~~~DiVil~v~d~~-   67 (153)
T d2i76a2           3 NFVGTGTLTRFFLECLKD-RYEIGYILSRSIDRARNLAEVYGGKAATLEK------------HP-ELNGVVFVIVPDRY-   67 (153)
T ss_dssp             EEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCC------------CC-C---CEEECSCTTT-
T ss_pred             EEEeCcHHHHHHHHHHHh-CCCEEEEEeCChhhhcchhhcccccccchhh------------hh-ccCcEEEEeccchh-
Confidence            367999999998876655 4424567899999998887765433222211            11 14799999998765 


Q ss_pred             HHHHHHHhccCCce-EEEEc
Q 018022          286 VQEAYACCRKGWGK-TIVLG  304 (362)
Q Consensus       286 ~~~~~~~l~~~~G~-iv~~G  304 (362)
                      +......++.. ++ ++.++
T Consensus        68 i~~v~~~l~~~-~~ivi~~s   86 (153)
T d2i76a2          68 IKTVANHLNLG-DAVLVHCS   86 (153)
T ss_dssp             HHHHHTTTCCS-SCCEEECC
T ss_pred             hhHHHhhhccc-ceeeeecc
Confidence            77777878654 44 44444

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.77  E-value=0.23  Score=43.48  Aligned_cols=73  Identities=15%  Similarity=0.129  Sum_probs=44.3

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc----hHHHHH---HhcCCcEEE-cCCCCCCccHHHHHHhhcCC-C
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS----EKFEIG---KRFGVTEFV-NSKNCGDKSVSQIIIDMTDG-G  272 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~----~~~~~~---~~~g~~~vv-~~~~~~~~~~~~~i~~~~~~-g  272 (362)
                      +.|||+|+ |.+|...+..+...|+ +|+++++..    +.....   ..-+...+. |-.+      .+.+.++... +
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d------~~~l~~~~~~~~   74 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGY-DCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCD------RKGLEKVFKEYK   74 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTC------HHHHHHHHHHSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-eEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCC------HHHHHHHHhccC
Confidence            46899998 9999999998888998 888886422    122222   222333222 2111      2233332222 7


Q ss_pred             ccEEEEcCCC
Q 018022          273 ADYCFECVGL  282 (362)
Q Consensus       273 ~d~vid~~g~  282 (362)
                      +|+||.+++.
T Consensus        75 ~d~VihlAa~   84 (347)
T d1z45a2          75 IDSVIHFAGL   84 (347)
T ss_dssp             CCEEEECCSC
T ss_pred             CCEEEEcccc
Confidence            9999998774

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=91.73  E-value=0.51  Score=32.82  Aligned_cols=67  Identities=19%  Similarity=0.343  Sum_probs=48.2

Q ss_pred             EEEEECCChHHHH-HHHHHHHcCCCEEEEEcCCc-hHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022          204 TVVIFGLGSIGLA-VAEGARLCGATRIIGVDVIS-EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG  281 (362)
Q Consensus       204 ~vlI~Gag~~G~~-a~~la~~~g~~~vi~~~~~~-~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g  281 (362)
                      +|-++|-|++|.. .+++++.+|+ .|.+.|..+ +..+.++++|+......+.   +++         .++|+|+-+..
T Consensus         3 ~ihfiGIgG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~---~~i---------~~~d~vV~SsA   69 (89)
T d1j6ua1           3 KIHFVGIGGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKLGIPIFVPHSA---DNW---------YDPDLVIKTPA   69 (89)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTCCEESSCCT---TSC---------CCCSEEEECTT
T ss_pred             EEEEEeECHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHCCCeEEeeecc---ccc---------CCCCEEEEecC
Confidence            5667788888875 4788899999 999999887 4567789999875433332   222         15888888776


Q ss_pred             CH
Q 018022          282 LA  283 (362)
Q Consensus       282 ~~  283 (362)
                      .+
T Consensus        70 I~   71 (89)
T d1j6ua1          70 VR   71 (89)
T ss_dssp             CC
T ss_pred             cC
Confidence            54

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=91.69  E-value=0.18  Score=41.89  Aligned_cols=89  Identities=13%  Similarity=0.149  Sum_probs=58.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EEEcCCCCCCccHHHHHHhhc-CCCc
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMT-DGGA  273 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~~i~~~~-~~g~  273 (362)
                      .++.+||=+|+|. |..+..+++ .|. +|+++|.+++-++.+++    .+.. .++..+      +    .++. .+.|
T Consensus        36 ~~~~~vLDiGCG~-G~~~~~l~~-~g~-~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d------~----~~~~~~~~f  102 (246)
T d1y8ca_          36 LVFDDYLDLACGT-GNLTENLCP-KFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLACQD------I----SNLNINRKF  102 (246)
T ss_dssp             CCTTEEEEETCTT-STTHHHHGG-GSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEECCC------G----GGCCCSCCE
T ss_pred             CCCCeEEEEeCcC-CHHHHHHHH-hCC-ccEeeccchhhhhhccccccccCccceeeccc------h----hhhcccccc
Confidence            4567899999874 666666665 477 99999999987777654    3432 333321      1    1222 3379


Q ss_pred             cEEEEcCCC------H----HHHHHHHHHhccCCceEEE
Q 018022          274 DYCFECVGL------A----SLVQEAYACCRKGWGKTIV  302 (362)
Q Consensus       274 d~vid~~g~------~----~~~~~~~~~l~~~~G~iv~  302 (362)
                      |+|+...+.      .    ..++.+.+.|+++ |.+++
T Consensus       103 D~i~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~~i~  140 (246)
T d1y8ca_         103 DLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEG-GVFIF  140 (246)
T ss_dssp             EEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEE-EEEEE
T ss_pred             cccceeeeeeeccCCHHHHHHHHHHHHHhCCCC-eEEEE
Confidence            999964332      1    3477888899998 98875

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.60  E-value=0.15  Score=37.81  Aligned_cols=35  Identities=23%  Similarity=0.354  Sum_probs=31.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      ..++++|+|+|.+|+-+++++..+|. .|..+.+.+
T Consensus        22 ~p~~~vIiG~G~ig~E~A~~l~~lG~-~Vtii~~~~   56 (122)
T d1v59a2          22 IPKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQP   56 (122)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCeEEEECCCchHHHHHHHHHhhCc-ceeEEEecc
Confidence            34799999999999999999999999 999888754

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.58  E-value=0.08  Score=43.94  Aligned_cols=75  Identities=19%  Similarity=0.244  Sum_probs=46.8

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHhcCCcEE-EcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      +.+|||+|+ |.+|...++.+...|. .+|++++|++.+...-..-..... .|..+      .+.+.+... ++|++|.
T Consensus        14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~------~~~~~~~~~-~~d~vi~   86 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEK------LDDYASAFQ-GHDVGFC   86 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGG------GGGGGGGGS-SCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccc------ccccccccc-ccccccc
Confidence            468999998 9999999988887774 489999986644322111122222 22221      122222222 6999999


Q ss_pred             cCCCH
Q 018022          279 CVGLA  283 (362)
Q Consensus       279 ~~g~~  283 (362)
                      ++|..
T Consensus        87 ~~~~~   91 (232)
T d2bkaa1          87 CLGTT   91 (232)
T ss_dssp             CCCCC
T ss_pred             ccccc
Confidence            99863

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=91.53  E-value=0.44  Score=41.53  Aligned_cols=76  Identities=13%  Similarity=0.118  Sum_probs=47.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHH--HHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEE
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKF--EIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCF  277 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~--~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vi  277 (362)
                      ...+|+|+|+ |.+|...+..+...|+ +|+++.|+..+.  +.+......+++..+-   .+-.+.+..... +.|.++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~---~d~~~~~~~a~~-~~~~~~   76 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKGLIAEELQAIPNVTLFQGPL---LNNVPLMDTLFE-GAHLAF   76 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCSHHHHHHHTSTTEEEEESCC---TTCHHHHHHHHT-TCSEEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCC-eEEEEECCcchhhhhhhcccCCCEEEEeeC---CCcHHHHHHHhc-CCceEE
Confidence            4578999998 9999999999999999 888888876543  3333332223443322   111223333333 567766


Q ss_pred             EcCC
Q 018022          278 ECVG  281 (362)
Q Consensus       278 d~~g  281 (362)
                      ....
T Consensus        77 ~~~~   80 (350)
T d1xgka_          77 INTT   80 (350)
T ss_dssp             ECCC
T ss_pred             eecc
Confidence            6443

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=91.51  E-value=0.15  Score=37.58  Aligned_cols=36  Identities=22%  Similarity=0.362  Sum_probs=31.0

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      +..++++|+|+|.+|+-+++.++.+|. .|..+.+.+
T Consensus        20 ~~p~~i~IiG~G~ig~E~A~~l~~~G~-~Vtiv~~~~   55 (119)
T d3lada2          20 NVPGKLGVIGAGVIGLELGSVWARLGA-EVTVLEAMD   55 (119)
T ss_dssp             SCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             cCCCeEEEECCChHHHHHHHHHHHcCC-ceEEEEeec
Confidence            345889999999999999999999999 777777654

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=91.46  E-value=0.16  Score=37.21  Aligned_cols=35  Identities=20%  Similarity=0.285  Sum_probs=31.2

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE  237 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~  237 (362)
                      .++++|+|+|.+|+-+++.++.+|. +|..+.+.+.
T Consensus        21 p~~vvIiGgG~ig~E~A~~l~~~G~-~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGAGYIGVELGGVINGLGA-KTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             CCEEEEECCChhhHHHHHHhhcccc-EEEEEeecch
Confidence            4789999999999999999999999 8999987653

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.44  E-value=0.51  Score=35.22  Aligned_cols=93  Identities=17%  Similarity=0.237  Sum_probs=55.2

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  282 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~  282 (362)
                      +|.|+|+ |-+|++..+++...+.+-+..++.+..                     ..+         ..+|++||.+.-
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~---------------------~~~---------~~~DVvIDFS~p   51 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV---------------------EEL---------DSPDVVIDFSSP   51 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE---------------------EEC---------SCCSEEEECSCG
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH---------------------HHh---------ccCCEEEEecCH
Confidence            5889998 999999999999999844444443211                     000         147888887776


Q ss_pred             HHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 018022          283 ASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS  329 (362)
Q Consensus       283 ~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  329 (362)
                      .. +...++.+... +.=+.+|.+ +..+..+....-..|.+.+...
T Consensus        52 ~~-~~~~l~~~~~~-~~p~ViGTT-G~~~~~~~~i~~~ak~~pv~~a   95 (128)
T d1vm6a3          52 EA-LPKTVDLCKKY-RAGLVLGTT-ALKEEHLQMLRELSKEVPVVQA   95 (128)
T ss_dssp             GG-HHHHHHHHHHH-TCEEEECCC-SCCHHHHHHHHHHTTTSEEEEC
T ss_pred             HH-HHHHHHHHHhc-CCCEEEEcC-CCCHHHHHHHHHHHhhCCEEee
Confidence            55 44444444443 566677763 3333333333333456666554

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.41  E-value=0.38  Score=41.94  Aligned_cols=95  Identities=20%  Similarity=0.239  Sum_probs=54.7

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCc---EEEcCCCCCCccHHHHHHh
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT---EFVNSKNCGDKSVSQIIID  267 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~---~vv~~~~~~~~~~~~~i~~  267 (362)
                      ......+|++||-+|+|. |+.+..+| ..|+.+|++++.++ ..+.+    ++.+..   .++..+-   .++     .
T Consensus        32 ~~~~~~~~~~VLDlGcGt-G~ls~~aa-~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~---~~l-----~  100 (328)
T d1g6q1_          32 QNKDLFKDKIVLDVGCGT-GILSMFAA-KHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKL---EDV-----H  100 (328)
T ss_dssp             HHHHHHTTCEEEEETCTT-SHHHHHHH-HTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCT---TTS-----C
T ss_pred             hccccCCcCEEEEeCCCC-CHHHHHHH-HhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeeh---hhc-----c
Confidence            344556899999999864 55555444 46777999999875 33333    333432   2333222   111     1


Q ss_pred             hcCCCccEEEEcCC-----C---H-HHHHHHHHHhccCCceEE
Q 018022          268 MTDGGADYCFECVG-----L---A-SLVQEAYACCRKGWGKTI  301 (362)
Q Consensus       268 ~~~~g~d~vid~~g-----~---~-~~~~~~~~~l~~~~G~iv  301 (362)
                      +..+.+|+|+...-     .   . ..+....+.|+++ |+++
T Consensus       101 ~~~~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~Lkpg-G~ii  142 (328)
T d1g6q1_         101 LPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEG-GLIF  142 (328)
T ss_dssp             CSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred             CcccceeEEEEEecceeeccchhHHHHHHHHHhccCCC-eEEE
Confidence            12237999876321     1   1 2344555789997 8874

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=91.40  E-value=0.13  Score=42.36  Aligned_cols=35  Identities=26%  Similarity=0.189  Sum_probs=30.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      +.-.+|+|+|+|..|++++..+...|. +|.++++.
T Consensus         4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~-~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLGSGVIGLSSALILARKGY-SVHILARD   38 (268)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred             CCCCcEEEECccHHHHHHHHHHHHCCC-CEEEEeCC
Confidence            345689999999999999999999999 89999864

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=91.39  E-value=0.41  Score=41.62  Aligned_cols=97  Identities=21%  Similarity=0.202  Sum_probs=65.7

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc------CC-----cEEEcCCCCCCccHHHHHHh
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF------GV-----TEFVNSKNCGDKSVSQIIID  267 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~------g~-----~~vv~~~~~~~~~~~~~i~~  267 (362)
                      .+..++|||+|.|. |..+-.+++.....+|.+++.+++-.+.+++.      +.     -+++.      .|..+.+++
T Consensus        75 ~~~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~------~Da~~~l~~  147 (312)
T d1uira_          75 HPEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI------DDARAYLER  147 (312)
T ss_dssp             SSCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE------SCHHHHHHH
T ss_pred             CCCcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEE------chHHHHhhh
Confidence            35568999998765 55566677766666999999999988888763      11     12333      345555654


Q ss_pred             hcCCCccEEEEcC----C---------CHHHHHHHHHHhccCCceEEEEc
Q 018022          268 MTDGGADYCFECV----G---------LASLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       268 ~~~~g~d~vid~~----g---------~~~~~~~~~~~l~~~~G~iv~~G  304 (362)
                       ++..||+||--.    +         +...++.+.+.|+++ |.++.-.
T Consensus       148 -~~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~-Gvlv~~~  195 (312)
T d1uira_         148 -TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPG-GVMGMQT  195 (312)
T ss_dssp             -CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             -cCCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCC-ceEEEec
Confidence             334899998532    2         124578899999998 9887643

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.31  E-value=0.24  Score=39.15  Aligned_cols=48  Identities=25%  Similarity=0.142  Sum_probs=35.7

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG  242 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~  242 (362)
                      +.+...--.+.+|||+|+|+++.+++..+..  ..+|.++.|+.+|.+.+
T Consensus         9 l~~~~~~~~~k~vlIlGaGG~arai~~aL~~--~~~i~I~nR~~~ka~~l   56 (177)
T d1nvta1           9 LEEEIGRVKDKNIVIYGAGGAARAVAFELAK--DNNIIIANRTVEKAEAL   56 (177)
T ss_dssp             HHHHHCCCCSCEEEEECCSHHHHHHHHHHTS--SSEEEEECSSHHHHHHH
T ss_pred             HHHhCCCcCCCEEEEECCcHHHHHHHHHHcc--ccceeeehhhhhHHHHH
Confidence            3333333477899999999999987766543  34999999998887655

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.28  E-value=0.097  Score=43.39  Aligned_cols=36  Identities=22%  Similarity=0.291  Sum_probs=31.6

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHH
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKF  239 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~  239 (362)
                      .++||+|+ +++|++.++.+...|+ +|+.+++++++.
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~   38 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGY-RVVVLDLRREGE   38 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcccc
Confidence            57899998 9999999999999999 999999887643

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.27  E-value=0.18  Score=37.95  Aligned_cols=40  Identities=25%  Similarity=0.331  Sum_probs=34.6

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch
Q 018022          197 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE  237 (362)
Q Consensus       197 ~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~  237 (362)
                      ..++++.+++|+|+|.+|+-++..++.+|. .|..+.+.+.
T Consensus        30 ~~~~~~k~v~VIGgG~iG~E~A~~l~~~g~-~Vtvie~~~~   69 (133)
T d1q1ra2          30 RQLIADNRLVVIGGGYIGLEVAATAIKANM-HVTLLDTAAR   69 (133)
T ss_dssp             HTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             HhhccCCEEEEECCchHHHHHHHHHHhhCc-ceeeeeeccc
Confidence            345678999999999999999999999999 8999987653

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.25  E-value=0.13  Score=43.94  Aligned_cols=36  Identities=25%  Similarity=0.348  Sum_probs=31.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      ++..+|+|+|+|..|+.|+..+...|+ +|++++.++
T Consensus         3 ~~~~kViVIGaG~aGL~aA~~L~~~G~-~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            456789999999999999999999999 999998654

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=91.15  E-value=0.25  Score=36.91  Aligned_cols=88  Identities=17%  Similarity=0.276  Sum_probs=53.7

Q ss_pred             CCCCEEEEECCCh--HH------HHHHHH---HHHcCCCEEEEEcCCchHHHHHHhcCCcE-EEcCCCCCCccHHHHHHh
Q 018022          200 EVGSTVVIFGLGS--IG------LAVAEG---ARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIID  267 (362)
Q Consensus       200 ~~g~~vlI~Gag~--~G------~~a~~l---a~~~g~~~vi~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~i~~  267 (362)
                      ..-.+|||+|+|+  +|      .+++|.   ++..|+ +++.+..|++-...-.++. |+ .+.+-+      .+.+.+
T Consensus         5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~-~~iliN~NP~TVstd~d~a-D~lYfePlt------~e~v~~   76 (127)
T d1a9xa3           5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGY-RVINVNSNPATIMTDPEMA-DATYIEPIH------WEVVRK   76 (127)
T ss_dssp             SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTC-EEEEECSCTTCGGGCGGGS-SEEECSCCC------HHHHHH
T ss_pred             CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCC-eEEEecCchHhhhcChhhc-ceeeeecCC------HHHHHH
Confidence            3457899999977  33      444444   456699 8888988887654433332 33 333433      222222


Q ss_pred             hcCC-CccEEEEcCCCHHHHHHHHHHhcc
Q 018022          268 MTDG-GADYCFECVGLASLVQEAYACCRK  295 (362)
Q Consensus       268 ~~~~-g~d~vid~~g~~~~~~~~~~~l~~  295 (362)
                      .... .+|.++-..|+...++.+.++.+.
T Consensus        77 Ii~~E~pd~il~~~GGQtalnla~~L~~~  105 (127)
T d1a9xa3          77 IIEKERPDAVLPTMGGQTALNCALELERQ  105 (127)
T ss_dssp             HHHHHCCSEEECSSSHHHHHHHHHHHHHT
T ss_pred             HHHHhCcCCeEEEeeeehHhHHHHHHHHc
Confidence            2222 688888888888767666666544

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.04  E-value=0.08  Score=45.15  Aligned_cols=33  Identities=21%  Similarity=0.292  Sum_probs=30.0

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE  237 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~  237 (362)
                      .|+|+|+|+.|++++..++..|+ +|++++++++
T Consensus         4 ~V~IvGaGp~Gl~~A~~L~~~G~-~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQLLHKAGI-DNVILERQTP   36 (292)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSSCH
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCCC
Confidence            58999999999999999999999 9999988754

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.01  E-value=1.8  Score=37.85  Aligned_cols=109  Identities=20%  Similarity=0.252  Sum_probs=67.9

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc--hHHHHHHhcCCcEEEcCCCC----------------
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS--EKFEIGKRFGVTEFVNSKNC----------------  256 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~--~~~~~~~~~g~~~vv~~~~~----------------  256 (362)
                      +...++++..|+...+|..|.+++..|+.+|++-++++..+.  +|.+.++.+|++.+......                
T Consensus        90 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~~  169 (355)
T d1jbqa_          90 RDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLK  169 (355)
T ss_dssp             HHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHH
T ss_pred             HcCCcccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHHH
Confidence            334556677777667799999999999999996555554433  57788889998754321100                


Q ss_pred             -------------CCcc-------HHHHHHhhcCCCccEEEEcCCCHHHHHHHH---HHhccCCceEEEEc
Q 018022          257 -------------GDKS-------VSQIIIDMTDGGADYCFECVGLASLVQEAY---ACCRKGWGKTIVLG  304 (362)
Q Consensus       257 -------------~~~~-------~~~~i~~~~~~g~d~vid~~g~~~~~~~~~---~~l~~~~G~iv~~G  304 (362)
                                   .+.+       ....+.+..++.+|.++.++|+..++..+.   +...+. -+++.+-
T Consensus       170 ~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~-~kii~ve  239 (355)
T d1jbqa_         170 NEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPG-CRIIGVD  239 (355)
T ss_dssp             HHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEE
T ss_pred             HhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCc-ceEEeec
Confidence                         0001       112222333446899999999876555444   444444 5666553

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=90.92  E-value=0.48  Score=41.26  Aligned_cols=103  Identities=17%  Similarity=0.139  Sum_probs=69.2

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHH-HcCCCEEEEEcCCchHHHHH----HhcCCcEEEcCCCCCCccHHHHHHhhcCCCc
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIG----KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGA  273 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~-~~g~~~vi~~~~~~~~~~~~----~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~  273 (362)
                      .+...++.|+|+|..+...++... .+..++|.+.+++.++.+.+    +..+.....+.        .+.+.     +.
T Consensus       122 ~~~~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~--------~~a~~-----~a  188 (320)
T d1omoa_         122 RKNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQP--------AEEAS-----RC  188 (320)
T ss_dssp             CTTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECC--------HHHHT-----SS
T ss_pred             cCCccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccch--------hhhhc-----cc
Confidence            355578899999999988777666 46888999999999886554    33454433321        22221     58


Q ss_pred             cEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH
Q 018022          274 DYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF  317 (362)
Q Consensus       274 d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~  317 (362)
                      |+|+-|+.+...+- -.+.++++ -.++.+|.+.+.. -+++..
T Consensus       189 DiV~taT~s~~P~~-~~~~l~~G-~hv~~iGs~~p~~-~Eld~~  229 (320)
T d1omoa_         189 DVLVTTTPSRKPVV-KAEWVEEG-THINAIGADGPGK-QELDVE  229 (320)
T ss_dssp             SEEEECCCCSSCCB-CGGGCCTT-CEEEECSCCSTTC-CCBCHH
T ss_pred             cEEEEeccCccccc-chhhcCCC-CeEeecCCccccc-cccCHH
Confidence            99999988653111 12468886 7888999865433 456654

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=90.89  E-value=0.74  Score=36.25  Aligned_cols=81  Identities=12%  Similarity=-0.006  Sum_probs=49.6

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch--HHHHHHhcCC---------cEEEcCCCCCCccHHHHHHhhcCCC
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRFGV---------TEFVNSKNCGDKSVSQIIIDMTDGG  272 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~--~~~~~~~~g~---------~~vv~~~~~~~~~~~~~i~~~~~~g  272 (362)
                      +|.|+|+|..|.+.+..+...|. .|....+..+  ..+...+-..         ...+..    ..++.+.+.     .
T Consensus         2 kI~ViGaG~~GtalA~~la~~g~-~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~----~~~~~~~~~-----~   71 (180)
T d1txga2           2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFW----PEQLEKCLE-----N   71 (180)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEEC----GGGHHHHHT-----T
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-EEEEEEecccHHHHHHHhhhhhhhhhcchhccccccc----cccHHHHHh-----c
Confidence            58899999999998888888888 8888877433  2333322111         001111    123333332     4


Q ss_pred             ccEEEEcCCCHHHHHHHHHHhcc
Q 018022          273 ADYCFECVGLASLVQEAYACCRK  295 (362)
Q Consensus       273 ~d~vid~~g~~~~~~~~~~~l~~  295 (362)
                      .|+||.++.... ++..++.+.+
T Consensus        72 ad~Ii~avps~~-~~~~~~~l~~   93 (180)
T d1txga2          72 AEVVLLGVSTDG-VLPVMSRILP   93 (180)
T ss_dssp             CSEEEECSCGGG-HHHHHHHHTT
T ss_pred             cchhhcccchhh-hHHHHHhhcc
Confidence            899999999875 5554444433

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=90.85  E-value=0.1  Score=35.60  Aligned_cols=35  Identities=20%  Similarity=0.349  Sum_probs=30.6

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchH
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK  238 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~  238 (362)
                      .+|.|+|+|-+|++.++.++.+|+ ++++.+.+++-
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~-~v~vldp~~~~   36 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGI-AVWPVGLDAEP   36 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTE-EEEEECTTSCG
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCC-EEEEEcCCCCC
Confidence            378999999999999999999999 89999866543

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.82  E-value=0.18  Score=40.88  Aligned_cols=41  Identities=37%  Similarity=0.534  Sum_probs=36.4

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF  245 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~  245 (362)
                      +|.|+|+|-+|+..+..+...|. .|+++|.++++.+.+.+-
T Consensus         2 kI~ViGlG~vGl~~a~~la~~g~-~V~g~D~n~~~i~~ln~g   42 (202)
T d1mv8a2           2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQG   42 (202)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT
T ss_pred             EEEEECCCHhHHHHHHHHHhCCC-cEEEEeCCHHHHHHhccc
Confidence            57899999999998888888999 999999999998888753

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.76  E-value=0.64  Score=39.55  Aligned_cols=96  Identities=15%  Similarity=0.150  Sum_probs=62.6

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC-C---------------cEEEcCCCCCCccHH
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-V---------------TEFVNSKNCGDKSVS  262 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g-~---------------~~vv~~~~~~~~~~~  262 (362)
                      .....+|||+|+|. |..+-.+++ .+..+|.+++.+++-.+.++++- .               -+++.      .|..
T Consensus        70 ~~~p~~vLiiG~G~-G~~~~~~l~-~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~------~Da~  141 (276)
T d1mjfa_          70 HPKPKRVLVIGGGD-GGTVREVLQ-HDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI------GDGF  141 (276)
T ss_dssp             SSCCCEEEEEECTT-SHHHHHHTT-SCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE------SCHH
T ss_pred             CCCCceEEEecCCc-hHHHHHHHH-hCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEE------ChHH
Confidence            35668999998754 333344445 34568999999999888887632 1               12443      2334


Q ss_pred             HHHHhhcCCCccEEEEcCCC----------HHHHHHHHHHhccCCceEEEEcc
Q 018022          263 QIIIDMTDGGADYCFECVGL----------ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       263 ~~i~~~~~~g~d~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      +.+++  .+++|+||--...          ...++.+.+.|+++ |.++.-+.
T Consensus       142 ~~l~~--~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~-Gv~v~q~~  191 (276)
T d1mjfa_         142 EFIKN--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQAG  191 (276)
T ss_dssp             HHHHH--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             HHHhc--cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCC-ceEEEecC
Confidence            45543  3479998852222          25578899999998 99887654

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.71  E-value=0.29  Score=42.24  Aligned_cols=97  Identities=15%  Similarity=0.109  Sum_probs=65.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC----------cEEEcCCCCCCccHHHHHHhhc
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV----------TEFVNSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~----------~~vv~~~~~~~~~~~~~i~~~~  269 (362)
                      +...+|||+|.|. |..+-.+++..+.++|.+++.+++-.+.++++-.          -+++.      .|..+.+++ +
T Consensus        88 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~------~Da~~~l~~-~  159 (295)
T d1inla_          88 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI------ANGAEYVRK-F  159 (295)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHGGG-C
T ss_pred             CCCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEh------hhHHHHHhc-C
Confidence            4568999998755 4455567777777799999999998888876321          12333      234445543 3


Q ss_pred             CCCccEEEEcCC-----------CHHHHHHHHHHhccCCceEEEEcc
Q 018022          270 DGGADYCFECVG-----------LASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       270 ~~g~d~vid~~g-----------~~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ...||+||--..           +...++.+.+.|+++ |.++.-..
T Consensus       160 ~~~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~-Gi~v~q~~  205 (295)
T d1inla_         160 KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKED-GVFSAETE  205 (295)
T ss_dssp             SSCEEEEEEEC----------CCSHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             CCCCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCC-cEEEEecC
Confidence            337999985321           125577899999998 99887754

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=90.54  E-value=0.2  Score=36.64  Aligned_cols=35  Identities=29%  Similarity=0.396  Sum_probs=30.9

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      .+++++|+|+|.+|.-+++.++.+|. +|..+.+.+
T Consensus        20 ~p~~vvIiGgG~~G~E~A~~l~~~g~-~Vtlve~~~   54 (115)
T d1lvla2          20 LPQHLVVVGGGYIGLELGIAYRKLGA-QVSVVEARE   54 (115)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCCeEEEECCCHHHHHHHHHHhhccc-ceEEEeeec
Confidence            34789999999999999999999999 888887754

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.37  E-value=0.16  Score=37.65  Aligned_cols=34  Identities=12%  Similarity=0.039  Sum_probs=29.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      ..++++|+|+|.+|+-.+++++.+|. .|..+.++
T Consensus        19 ~P~~vvIIGgG~iG~E~A~~l~~lG~-~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVGASYVALECAGFLAGIGL-DVTVMVRS   52 (122)
T ss_dssp             CCCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             CCCeEEEECCCccHHHHHHHHhhcCC-eEEEEEec
Confidence            44689999999999999999999999 66666654

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=90.34  E-value=0.15  Score=37.92  Aligned_cols=37  Identities=30%  Similarity=0.442  Sum_probs=32.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE  237 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~  237 (362)
                      +..++++|+|+|.+|+-++++.+.+|. +|.++.++++
T Consensus        23 ~~p~~~viiG~G~iglE~A~~~~~~G~-~Vtvi~~~~~   59 (123)
T d1dxla2          23 EIPKKLVVIGAGYIGLEMGSVWGRIGS-EVTVVEFASE   59 (123)
T ss_dssp             SCCSEEEESCCSHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred             ccCCeEEEEccchHHHHHHHHHHhcCC-eEEEEEEccc
Confidence            446899999999999999999999999 9999987654

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.31  E-value=0.24  Score=36.81  Aligned_cols=34  Identities=21%  Similarity=0.137  Sum_probs=30.8

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      .++++|+|+|.+|+-++..++.+|. +|..+.+.+
T Consensus        22 pk~vvIvGgG~iG~E~A~~l~~~G~-~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAGYIAVEMAGILSALGS-KTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCEEEEEcCCccHHHHHHHHhcCCc-EEEEEeecc
Confidence            4789999999999999999999999 899998764

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=90.27  E-value=2.2  Score=35.99  Aligned_cols=108  Identities=16%  Similarity=0.157  Sum_probs=65.0

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcC--CchHHHHHHhcCCcEEEcCCCC----------------
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV--ISEKFEIGKRFGVTEFVNSKNC----------------  256 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~--~~~~~~~~~~~g~~~vv~~~~~----------------  256 (362)
                      +...+.++.+|+...+|..|++++..++.+|.+-+|++..  ++.|.+.++.+|+..++...+.                
T Consensus        53 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~~  132 (292)
T d2bhsa1          53 KRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRG  132 (292)
T ss_dssp             HTTSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHHT
T ss_pred             HhCCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhccccc
Confidence            3344556666666677999999999999999954444443  3457778888998643322110                


Q ss_pred             ---------CCcc-------HHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHh---ccCCceEEEE
Q 018022          257 ---------GDKS-------VSQIIIDMTDGGADYCFECVGLASLVQEAYACC---RKGWGKTIVL  303 (362)
Q Consensus       257 ---------~~~~-------~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l---~~~~G~iv~~  303 (362)
                               ++.+       ....|.+..++.+|.++-++|+...+.-+...+   .+. .+++.+
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~-~~i~~V  197 (292)
T d2bhsa1         133 EGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKP-VTIVGL  197 (292)
T ss_dssp             SSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSC-CEEEEE
T ss_pred             cccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCc-ceEEEe
Confidence                     0011       112222333446899999998776555444444   443 566554

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=90.25  E-value=0.53  Score=39.35  Aligned_cols=75  Identities=19%  Similarity=0.234  Sum_probs=47.2

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchH------HHHHHh---cCCcEEEcCCCCCCccHHHHHHhhcCC
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK------FEIGKR---FGVTEFVNSKNCGDKSVSQIIIDMTDG  271 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~------~~~~~~---~g~~~vv~~~~~~~~~~~~~i~~~~~~  271 (362)
                      -.+|||+|+ |.+|...+..+...|. .|++++++...      ...+..   .++ .++..+-   .+... +.+... 
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~---~~~~~-~~~~~~-   75 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGH-PTFLLVRESTASSNSEKAQLLESFKASGA-NIVHGSI---DDHAS-LVEAVK-   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCCTTTTHHHHHHHHHHHTTTC-EEECCCT---TCHHH-HHHHHH-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEECCCccccchhHHHHHHhhccCCc-EEEEeec---ccchh-hhhhhh-
Confidence            367999998 9999999999999999 89999886543      222222   233 3443332   22222 222221 


Q ss_pred             CccEEEEcCCCH
Q 018022          272 GADYCFECVGLA  283 (362)
Q Consensus       272 g~d~vid~~g~~  283 (362)
                      +.+.++.+.+..
T Consensus        76 ~~~~vi~~~~~~   87 (307)
T d1qyca_          76 NVDVVISTVGSL   87 (307)
T ss_dssp             TCSEEEECCCGG
T ss_pred             hceeeeeccccc
Confidence            478888877754

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=90.15  E-value=0.15  Score=42.61  Aligned_cols=34  Identities=32%  Similarity=0.504  Sum_probs=29.4

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCch
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE  237 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~  237 (362)
                      ..|||+|+ +++|++.++.+...|+ +|+.++++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECChH
Confidence            35789987 9999999999999999 8999987653

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=90.14  E-value=1.5  Score=35.31  Aligned_cols=93  Identities=13%  Similarity=0.168  Sum_probs=63.2

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCcE--EEcCCCCCCccHHHHHHhhcCCCccEE
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE--FVNSKNCGDKSVSQIIIDMTDGGADYC  276 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~~--vv~~~~~~~~~~~~~i~~~~~~g~d~v  276 (362)
                      ..||=+|+|. |..++.+|+...-..+++++.+...+..+    ++.+.+.  ++..+.   .+   ....+.++.+|.|
T Consensus        31 PlvLeIGcG~-G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da---~~---l~~~~~~~~~d~v  103 (204)
T d2fcaa1          31 PIHIEVGTGK-GQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDA---DT---LTDVFEPGEVKRV  103 (204)
T ss_dssp             CEEEEECCTT-SHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCG---GG---HHHHCCTTSCCEE
T ss_pred             ceEEEEEecC-cHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccch---hh---hhcccCchhhhcc
Confidence            4566678876 88888899987545999999998877654    3456543  333222   22   2222333478888


Q ss_pred             EEcCCCH--------------HHHHHHHHHhccCCceEEEE
Q 018022          277 FECVGLA--------------SLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       277 id~~g~~--------------~~~~~~~~~l~~~~G~iv~~  303 (362)
                      +-....+              ..+..+.+.|+++ |.+.+.
T Consensus       104 ~i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~Lkpg-G~l~i~  143 (204)
T d2fcaa1         104 YLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKG-GSIHFK  143 (204)
T ss_dssp             EEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTS-CEEEEE
T ss_pred             ccccccccchhhhcchhhhHHHHHHHHHHhCCCC-cEEEEE
Confidence            8765553              5688999999998 998876

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.02  E-value=0.49  Score=38.82  Aligned_cols=104  Identities=15%  Similarity=0.163  Sum_probs=67.0

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHc--CCCEEEEEcCCchHHHHHHh----cCCcEEEcCCCCCCccHHHHHHhh
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDM  268 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~--g~~~vi~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~~i~~~  268 (362)
                      ...+.....+||=+|.+. |..++.+|+.+  +. +++.++.+++..+.+++    .|....+....   .+..+.+.++
T Consensus        53 ~L~~~~~~k~vLEiGt~~-GyStl~~a~al~~~g-~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~---Gda~e~l~~~  127 (219)
T d2avda1          53 NLARLIQAKKALDLGTFT-GYSALALALALPADG-RVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL---KPALETLDEL  127 (219)
T ss_dssp             HHHHHTTCCEEEEECCTT-SHHHHHHHTTSCTTC-EEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHHH
T ss_pred             HHHHccCCCeEEEEechh-hHHHHHHHHhCCCCc-eEEEEeechhHHHHHHHHHHhcCccceEEEEE---eehhhcchhh
Confidence            444556678999998743 67777777765  34 99999999998777654    45432222222   2334444333


Q ss_pred             ----cCCCccEEEEcCCCH---HHHHHHHHHhccCCceEEEEc
Q 018022          269 ----TDGGADYCFECVGLA---SLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       269 ----~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~G  304 (362)
                          ..+.||.||--....   ..++.+++.|+++ |.++.=.
T Consensus       128 ~~~~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~G-Gvii~Dn  169 (219)
T d2avda1         128 LAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLR  169 (219)
T ss_dssp             HHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             hhhcccCCccEEEEeCCHHHHHHHHHHHHHHhcCC-cEEEEeC
Confidence                233799888765543   3467899999997 8777643

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.01  E-value=0.54  Score=35.83  Aligned_cols=33  Identities=18%  Similarity=0.277  Sum_probs=29.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV  234 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~  234 (362)
                      .|.+|||+|+|.+|..-+..+...|+ +|++++.
T Consensus        12 ~gkrvLViGgG~va~~ka~~Ll~~GA-~VtVvap   44 (150)
T d1kyqa1          12 KDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSP   44 (150)
T ss_dssp             TTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence            57899999999999999999999999 7777753

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=89.98  E-value=0.23  Score=37.04  Aligned_cols=36  Identities=31%  Similarity=0.449  Sum_probs=31.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      +..++++|+|+|.+|+-+++..+.+|. +|..+.+.+
T Consensus        24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~-~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIGGGIIGLEMGTVYSTLGS-RLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             ccCCeEEEECCCHHHHHHHHHhhcCCC-EEEEEEeec
Confidence            446899999999999999999999999 888887654

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=89.92  E-value=0.28  Score=36.23  Aligned_cols=39  Identities=23%  Similarity=0.298  Sum_probs=26.7

Q ss_pred             CCCEEEEECCCh--HH------HHH---HHHHHHcCCCEEEEEcCCchHHH
Q 018022          201 VGSTVVIFGLGS--IG------LAV---AEGARLCGATRIIGVDVISEKFE  240 (362)
Q Consensus       201 ~g~~vlI~Gag~--~G------~~a---~~la~~~g~~~vi~~~~~~~~~~  240 (362)
                      ...+|||+|+|+  +|      .++   +..+|..|+ ++|.+..|++-..
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~-~~IliN~NPeTVs   52 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGY-ETIMVNCNPETVS   52 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTC-EEEEECCCTTSST
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCC-eEEEEecChhhhh
Confidence            356899999977  33      444   444456799 8888887776553

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=89.90  E-value=0.59  Score=40.64  Aligned_cols=98  Identities=12%  Similarity=0.060  Sum_probs=61.8

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc--EEEcCCCCCCccHHHHHHhhc--C
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIIIDMT--D  270 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~--~vv~~~~~~~~~~~~~i~~~~--~  270 (362)
                      ..+|++||=.++|. |..++.+|+  |...|++++.+++.++.+++    .|.+  .++..      +..+.++.+.  +
T Consensus       143 ~~~g~rVLDl~~gt-G~~s~~~a~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~------d~~~~~~~~~~~~  213 (318)
T d1wxxa2         143 RFRGERALDVFSYA-GGFALHLAL--GFREVVAVDSSAEALRRAEENARLNGLGNVRVLEA------NAFDLLRRLEKEG  213 (318)
T ss_dssp             GCCEEEEEEETCTT-THHHHHHHH--HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEES------CHHHHHHHHHHTT
T ss_pred             HhCCCeeeccCCCC-cHHHHHHHh--cCCcEEeecchHHHHHHHHHHHHHcCCCCcceeec------cHHHHhhhhHhhh
Confidence            34788999887643 333344453  33499999999999888764    4553  23332      3333333332  2


Q ss_pred             CCccEEEEcCCC---------------HHHHHHHHHHhccCCceEEEEccC
Q 018022          271 GGADYCFECVGL---------------ASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       271 ~g~d~vid~~g~---------------~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      +.||+|+--.+.               ...+..+++.|+++ |.++....+
T Consensus       214 ~~fD~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpG-G~Lv~~scs  263 (318)
T d1wxxa2         214 ERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEG-GILATASCS  263 (318)
T ss_dssp             CCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEE-EEEEEEECC
T ss_pred             cCCCEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeCC
Confidence            379999863321               13456788899998 999888664

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.89  E-value=0.038  Score=48.22  Aligned_cols=31  Identities=23%  Similarity=0.339  Sum_probs=27.7

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcC
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDV  234 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~  234 (362)
                      .+|||+|+ |.+|...+..+...|+ .|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~-~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGH-EVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence            57999998 9999999999988999 8999875

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.87  E-value=0.37  Score=42.29  Aligned_cols=75  Identities=19%  Similarity=0.222  Sum_probs=46.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022          201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC  279 (362)
Q Consensus       201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~  279 (362)
                      ..-+|||+|+ |.+|...+..+...|. .|+++++..... .........+...+-   .+. +.+.+... ++|.||.+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~-~V~~~d~~~~~~-~~~~~~~~~~~~~D~---~~~-~~~~~~~~-~~d~Vih~   86 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEH-MTEDMFCDEFHLVDL---RVM-ENCLKVTE-GVDHVFNL   86 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSS-SCGGGTCSEEEECCT---TSH-HHHHHHHT-TCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCCccc-hhhhcccCcEEEeec---hhH-HHHHHHhh-cCCeEeec
Confidence            4678999998 9999999999999999 898887543321 111222223222222   222 23333332 69999997


Q ss_pred             CCC
Q 018022          280 VGL  282 (362)
Q Consensus       280 ~g~  282 (362)
                      ++.
T Consensus        87 a~~   89 (363)
T d2c5aa1          87 AAD   89 (363)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            743

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.71  E-value=0.47  Score=38.58  Aligned_cols=96  Identities=13%  Similarity=0.055  Sum_probs=63.1

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc----CCc--EEEcCCCCCCccHHHHHHhhcCC
Q 018022          198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVT--EFVNSKNCGDKSVSQIIIDMTDG  271 (362)
Q Consensus       198 ~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~----g~~--~vv~~~~~~~~~~~~~i~~~~~~  271 (362)
                      ...++.+||=+|+|. |..+..+++..+. +|++++.+++-++.+++.    +..  .++..+-   .++     ....+
T Consensus        57 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~---~~~-----~~~~~  126 (222)
T d2ex4a1          57 NKTGTSCALDCGAGI-GRITKRLLLPLFR-EVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGL---QDF-----TPEPD  126 (222)
T ss_dssp             -CCCCSEEEEETCTT-THHHHHTTTTTCS-EEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCG---GGC-----CCCSS
T ss_pred             CCCCCCEEEEeccCC-CHhhHHHHHhcCC-EEEEeecCHHHhhccccccccccccccccccccc---ccc-----ccccc
Confidence            456778999999866 7677777665555 999999999988888753    222  2232221   111     11123


Q ss_pred             CccEEEEcCC-----CH---HHHHHHHHHhccCCceEEEEc
Q 018022          272 GADYCFECVG-----LA---SLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       272 g~d~vid~~g-----~~---~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      .+|+|+....     .+   ..+..+.+.|+++ |.+++.-
T Consensus       127 ~fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~-G~~~i~~  166 (222)
T d2ex4a1         127 SYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPN-GIIVIKD  166 (222)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cccccccccccccchhhhhhhHHHHHHHhcCCc-ceEEEEE
Confidence            7999997332     22   3577889999998 9998764

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.64  E-value=0.46  Score=40.68  Aligned_cols=43  Identities=19%  Similarity=0.176  Sum_probs=33.2

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCch--HHHHHHhcC
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRFG  246 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~--~~~~~~~~g  246 (362)
                      .+|||+|+ |.+|...+..+...|+ +|+++++...  ..+.++.++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~l~~~~   46 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELG   46 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcccHHHHHHhc
Confidence            47999998 9999999998888899 9999987543  234444444

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.61  E-value=0.16  Score=41.10  Aligned_cols=32  Identities=16%  Similarity=0.324  Sum_probs=28.7

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      .|+|+|+|..|+.++..+...|. +|.++++++
T Consensus         7 DviViGaG~~Gl~~A~~La~~G~-~V~vlE~~~   38 (297)
T d2bcgg1           7 DVIVLGTGITECILSGLLSVDGK-KVLHIDKQD   38 (297)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence            37888999999999999989998 999999875

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.57  E-value=0.5  Score=36.17  Aligned_cols=39  Identities=26%  Similarity=0.341  Sum_probs=32.5

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchH
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEK  238 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~  238 (362)
                      ..+.+|.|+|+|.+|...+..+...+. ..++.+|.++++
T Consensus         4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            356789999999999998888887774 479999998877

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=89.53  E-value=1.3  Score=33.59  Aligned_cols=40  Identities=28%  Similarity=0.385  Sum_probs=32.5

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcC-CCEEEEEcCCchHHH
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFE  240 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~~~~~~~  240 (362)
                      ...+|.|+|+|.+|...+..+...| +..++.+|.++++.+
T Consensus         4 ~~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~   44 (146)
T d1ez4a1           4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTK   44 (146)
T ss_dssp             TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchhH
Confidence            3458999999999999888888777 458999999887643

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=89.53  E-value=1.8  Score=33.56  Aligned_cols=96  Identities=20%  Similarity=0.150  Sum_probs=55.8

Q ss_pred             cCCCCCCEEEEECC--ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCC-cEEEcCCCCCCccHHHHHHhhc
Q 018022          197 ANVEVGSTVVIFGL--GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV-TEFVNSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       197 ~~~~~g~~vlI~Ga--g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~-~~vv~~~~~~~~~~~~~i~~~~  269 (362)
                      ..+.+|.+||=.++  |.+|+   . |...|+ .+++++.+++..+.+++    ++. ..++..+.   ..+... ....
T Consensus        37 ~~~~~g~~vLDl~~G~G~~~i---~-a~~~ga-~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~---d~~~~~-~~~~  107 (171)
T d1ws6a1          37 LRYPRRGRFLDPFAGSGAVGL---E-AASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALPV---EVFLPE-AKAQ  107 (171)
T ss_dssp             HHCTTCCEEEEETCSSCHHHH---H-HHHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCH---HHHHHH-HHHT
T ss_pred             ccccCCCeEEEeccccchhhh---h-hhhccc-hhhhcccCHHHHhhhhHHHHhhccccceeeeeh---hccccc-cccc
Confidence            35678889988865  55554   3 334688 78899999998877753    555 34554332   222222 2223


Q ss_pred             CCCccEEEEc----CCCHHHHHHHHH--HhccCCceEEE
Q 018022          270 DGGADYCFEC----VGLASLVQEAYA--CCRKGWGKTIV  302 (362)
Q Consensus       270 ~~g~d~vid~----~g~~~~~~~~~~--~l~~~~G~iv~  302 (362)
                      .+.||+||-.    .+-...+..++.  .++++ |.+++
T Consensus       108 ~~~fD~If~DPPY~~~~~~~l~~l~~~~ll~~~-g~ivi  145 (171)
T d1ws6a1         108 GERFTVAFMAPPYAMDLAALFGELLASGLVEAG-GLYVL  145 (171)
T ss_dssp             TCCEEEEEECCCTTSCTTHHHHHHHHHTCEEEE-EEEEE
T ss_pred             CCccceeEEccccccCHHHHHHHHHHcCCcCCC-eEEEE
Confidence            3379999852    233333444443  47775 76654

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=89.37  E-value=0.13  Score=43.13  Aligned_cols=32  Identities=31%  Similarity=0.387  Sum_probs=28.7

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      +|+|+|+|+.|+.++..+...|+ +|+++++++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~-~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGGGISGLAVAHHLRSRGT-DAVLLESSA   33 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHTTTC-CEEEECSSS
T ss_pred             eEEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence            58999999999999999999999 899998753

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=89.35  E-value=1.3  Score=34.62  Aligned_cols=97  Identities=25%  Similarity=0.390  Sum_probs=58.3

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEE-cCCc--hHHHHHHhc----CC---cE-------EEcCCCC---CCccHHH
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGV-DVIS--EKFEIGKRF----GV---TE-------FVNSKNC---GDKSVSQ  263 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~-~~~~--~~~~~~~~~----g~---~~-------vv~~~~~---~~~~~~~  263 (362)
                      +|.|.|-|-+|+++.+.+...+. .++++ +...  +.+..+-++    |.   +.       +++.+..   ...+   
T Consensus         2 kIgINGfGRIGR~~~R~~~~~~~-~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~---   77 (169)
T d1dssg1           2 KIGINGFGRIGRLVLRAALEMGA-QVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMK---   77 (169)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTC-CEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSS---
T ss_pred             eEEEECCcHHHHHHHHHHHhCCC-cEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCC---
Confidence            57899999999999999988888 55555 4332  444444332    11   10       1110000   0000   


Q ss_pred             HHHhhcC-C-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022          264 IIIDMTD-G-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       264 ~i~~~~~-~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                       ..++.. . ++|+||||+|.-...+.+...+..+ -+-|++..+
T Consensus        78 -p~~i~W~~~gvD~ViEcTG~f~~~~~~~~hl~~g-akkViisaP  120 (169)
T d1dssg1          78 -PENIPWSKAGAEYIVESTGVFTTIEKASAHFKGG-AKKVIISAP  120 (169)
T ss_dssp             -GGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTT-CSEEEESSC
T ss_pred             -hHHCCccccCCCEEEecCceEcCHHHHHHHHhcC-CceEeecCC
Confidence             111111 2 7999999999876677888888886 777777653

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=89.34  E-value=0.16  Score=41.98  Aligned_cols=32  Identities=34%  Similarity=0.454  Sum_probs=28.3

Q ss_pred             EEEECCChHHHHHHHHHHHcCCCEEEEEcCCch
Q 018022          205 VVIFGLGSIGLAVAEGARLCGATRIIGVDVISE  237 (362)
Q Consensus       205 vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~  237 (362)
                      |+|+|+|+.|++++..+...|. +|+++++++.
T Consensus         5 ViIIGaG~aGl~aA~~la~~G~-~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGGGPSGLMAAIGAAEEGA-NVLLLDKGNK   36 (251)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEeCCCC
Confidence            7889999999999888888999 9999987653

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.22  E-value=1.7  Score=34.07  Aligned_cols=87  Identities=23%  Similarity=0.234  Sum_probs=62.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      ++.+|.|+|=|.=|.+.++-+|-.|.+.+++........+.+++-|+..         ..+.++++     ..|+|.-.+
T Consensus        15 k~k~IaViGYGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~~Gf~v---------~~~~eA~~-----~aDiim~L~   80 (182)
T d1np3a2          15 QGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKV---------ADVKTAVA-----AADVVMILT   80 (182)
T ss_dssp             HTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEE---------ECHHHHHH-----TCSEEEECS
T ss_pred             CCCEEEEEeeCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHhhhcccc---------ccHHHHhh-----hcCeeeeec
Confidence            4688999999999999999999999966666666556678888888753         23455554     389999988


Q ss_pred             CCHH---HHH-HHHHHhccCCceEEE
Q 018022          281 GLAS---LVQ-EAYACCRKGWGKTIV  302 (362)
Q Consensus       281 g~~~---~~~-~~~~~l~~~~G~iv~  302 (362)
                      +...   .++ .+...|+++ ..+.+
T Consensus        81 PD~~q~~vy~~~I~p~lk~g-~~L~F  105 (182)
T d1np3a2          81 PDEFQGRLYKEEIEPNLKKG-ATLAF  105 (182)
T ss_dssp             CHHHHHHHHHHHTGGGCCTT-CEEEE
T ss_pred             chHHHHHHHHHhhhhhcCCC-cEEEE
Confidence            8652   232 455567774 34433

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=89.18  E-value=0.21  Score=43.43  Aligned_cols=34  Identities=18%  Similarity=0.259  Sum_probs=30.3

Q ss_pred             CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      ..+|+|+|||..|+.++..+...|. +|++++.++
T Consensus         2 ~KKI~IIGaG~sGL~aA~~L~k~G~-~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGAGFSGAVIGRQLAEKGH-QVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCEEEEECCcHHHHHHHHHHHhCCC-CEEEEECCC
Confidence            4689999999999999999988898 999998764

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=89.14  E-value=0.17  Score=42.25  Aligned_cols=33  Identities=24%  Similarity=0.274  Sum_probs=29.4

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE  237 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~  237 (362)
                      .|+|+|+|+.|++++..+...|. +|++++++++
T Consensus         6 DViIIGaG~aGl~aA~~la~~G~-~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGKK   38 (253)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             cEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCC
Confidence            48899999999999999999998 9999998764

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.09  E-value=2.9  Score=33.42  Aligned_cols=122  Identities=17%  Similarity=0.074  Sum_probs=66.7

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCC-------chHHHHHHhcCCcEEEcC----CCCCCccHHHHHHhhcCCC
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVI-------SEKFEIGKRFGVTEFVNS----KNCGDKSVSQIIIDMTDGG  272 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~-------~~~~~~~~~~g~~~vv~~----~~~~~~~~~~~i~~~~~~g  272 (362)
                      +|++.|.+..|..+++.+...|+ .|+++-..       ..-.+.+++.+.......    ++....++.+.++++   .
T Consensus         2 kI~~~G~~~~~~~~l~~L~~~~~-~i~~V~t~p~~~~~~~~v~~~a~~~~ipv~~~~~~~~~~~~~~~~~~~l~~~---~   77 (203)
T d2bw0a2           2 KIAVIGQSLFGQEVYCHLRKEGH-EVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRWRAKGQALPDVVAKYQAL---G   77 (203)
T ss_dssp             EEEEECCHHHHHHHHHHHHHTTC-EEEEEEECCCCSSCCCHHHHHHHHHTCCEEECSCCEETTEECHHHHHHHHTT---C
T ss_pred             EEEEEcCCHHHHHHHHHHHHCCC-cEEEEEcCCCcCcCCChhhhhHHhcCCcccccccccccccccHHHHHHHHHh---C
Confidence            57888998899988888888898 55544321       122455666676532111    110112344444433   6


Q ss_pred             ccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022          273 ADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF  331 (362)
Q Consensus       273 ~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  331 (362)
                      +|+++-+.-..- +..-+-...+. |.+.+-....+...-.-+....+.++....|..+
T Consensus        78 ~Dliv~~~~~~i-i~~~~l~~~~~-g~iN~H~slLP~yrG~~pi~wai~~g~~~~GvTi  134 (203)
T d2bw0a2          78 AELNVLPFCSQF-IPMEIISAPRH-GSIIYHPSLLPRHRGASAINWTLIHGDKKGGFSI  134 (203)
T ss_dssp             CSEEEESSCSSC-CCHHHHTCSTT-CEEEEESSCTTTTBSSCHHHHHHHTTCSEEEEEE
T ss_pred             CCceEEeecchh-hhhhhhhhhhh-HhhhhhhcccccccccceeeeeecccccccCcee
Confidence            899987654433 44333444453 7777776544444434444444455555555543

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=88.93  E-value=0.76  Score=36.56  Aligned_cols=86  Identities=16%  Similarity=0.109  Sum_probs=59.9

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .+.+|.|+|.|.+|...+++++..|. +|++.++......    ..   ....     .++.+.+++     .|+++.+.
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~----~~---~~~~-----~~l~ell~~-----sDii~i~~  104 (188)
T d1sc6a1          43 RGKKLGIIGYGHIGTQLGILAESLGM-YVYFYDIENKLPL----GN---ATQV-----QHLSDLLNM-----SDVVSLHV  104 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCCC----TT---CEEC-----SCHHHHHHH-----CSEEEECC
T ss_pred             cceEEEEeecccchhhhhhhcccccc-eEeeccccccchh----hh---hhhh-----hhHHHHHhh-----ccceeecc
Confidence            57899999999999999999999999 9999987533110    01   1111     234444443     68888877


Q ss_pred             CCH----HHH-HHHHHHhccCCceEEEEcc
Q 018022          281 GLA----SLV-QEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       281 g~~----~~~-~~~~~~l~~~~G~iv~~G~  305 (362)
                      +-.    ..+ .+.++.|+++ ..+|.++.
T Consensus       105 plt~~T~~li~~~~l~~mk~~-a~lIN~aR  133 (188)
T d1sc6a1         105 PENPSTKNMMGAKEISLMKPG-SLLINASR  133 (188)
T ss_dssp             CSSTTTTTCBCHHHHHHSCTT-EEEEECSC
T ss_pred             cCCcchhhhccHHHHhhCCCC-CEEEEcCc
Confidence            633    112 4788889997 88888875

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=88.89  E-value=0.29  Score=37.81  Aligned_cols=36  Identities=22%  Similarity=0.350  Sum_probs=30.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCC-EEEEEcCCc
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVIS  236 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~-~vi~~~~~~  236 (362)
                      .|.+|+|+|+|..|+.++..++..+.+ +|+++++++
T Consensus         1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            478999999999999998888887743 788887665

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=88.80  E-value=2.2  Score=36.42  Aligned_cols=98  Identities=18%  Similarity=0.167  Sum_probs=64.7

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc--hHHHHHHhcCCcEEEcCCCC------------------
Q 018022          197 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS--EKFEIGKRFGVTEFVNSKNC------------------  256 (362)
Q Consensus       197 ~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~--~~~~~~~~~g~~~vv~~~~~------------------  256 (362)
                      ..+.++..|+...+|..|.+++..+++.|.+.+|++..+.  .|.+.++.+|+..+......                  
T Consensus        56 g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~~~~~~~~~~~~~~~~~~~~~~~~  135 (310)
T d1y7la1          56 GTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASDPS  135 (310)
T ss_dssp             TSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTT
T ss_pred             CCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEeccCccccchhhHHHHHHHHhhcC
Confidence            3456777666667799999999999999997666665544  46667778888654321100                  


Q ss_pred             --------CCcc--------HHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhc
Q 018022          257 --------GDKS--------VSQIIIDMTDGGADYCFECVGLASLVQEAYACCR  294 (362)
Q Consensus       257 --------~~~~--------~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~  294 (362)
                              .+..        ....+.+..++.+|.++.++|+...+.-+...++
T Consensus       136 ~~~~~~~~~~~~~~~~~~~~~a~Ei~~~~~~~~d~vv~~~G~Gg~~~G~~~~lk  189 (310)
T d1y7la1         136 RYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIK  189 (310)
T ss_dssp             TEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHH
T ss_pred             ccccCCCCcchhhHHHhhhhHHHHHHHhcCCCCCEEEecCcCCcchhHHHHHHH
Confidence                    0000        1223344445579999999998877777777665

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=88.76  E-value=0.68  Score=39.25  Aligned_cols=97  Identities=15%  Similarity=0.219  Sum_probs=65.3

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHh----cCCcE-EEcCCCCCCccHHHHHHhhcC
Q 018022          197 ANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTE-FVNSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       197 ~~~~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~g~~~-vv~~~~~~~~~~~~~i~~~~~  270 (362)
                      .++.++.+||=+|+|. |..+..+++..+. .+|+++|.+++-++.+++    .+... .+..+-   .++     . ..
T Consensus        23 ~~~~~~~~ILDiGcG~-G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~---~~~-----~-~~   92 (281)
T d2gh1a1          23 WKITKPVHIVDYGCGY-GYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDA---TEI-----E-LN   92 (281)
T ss_dssp             SCCCSCCEEEEETCTT-THHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCT---TTC-----C-CS
T ss_pred             hccCCcCEEEEecCcC-CHHHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccccccccccc---ccc-----c-cc
Confidence            3577888999999975 8888888886542 289999999988877764    34322 222221   111     1 12


Q ss_pred             CCccEEEEcCC-----CH-HHHHHHHHHhccCCceEEEEc
Q 018022          271 GGADYCFECVG-----LA-SLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       271 ~g~d~vid~~g-----~~-~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      +.||+|+..-.     .+ ..++.+.+.|+++ |.++.+-
T Consensus        93 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~lii~~  131 (281)
T d2gh1a1          93 DKYDIAICHAFLLHMTTPETMLQKMIHSVKKG-GKIICFE  131 (281)
T ss_dssp             SCEEEEEEESCGGGCSSHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             CCceEEEEehhhhcCCCHHHHHHHHHHHcCcC-cEEEEEE
Confidence            37999987532     22 4578999999998 9988653

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=88.73  E-value=0.72  Score=38.51  Aligned_cols=99  Identities=12%  Similarity=0.015  Sum_probs=65.3

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc-CC-c--EEEcCCCCCCccHHHHHHhhcC
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GV-T--EFVNSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-g~-~--~vv~~~~~~~~~~~~~i~~~~~  270 (362)
                      .......+.+||=+|+|. |..+..++..... .|++++.+++-++.+++. .. .  .++..+-   .++     ...+
T Consensus        87 ~~l~~~~~~~vLD~GcG~-G~~t~~ll~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d~---~~~-----~~~~  156 (254)
T d1xtpa_          87 ASLPGHGTSRALDCGAGI-GRITKNLLTKLYA-TTDLLEPVKHMLEEAKRELAGMPVGKFILASM---ETA-----TLPP  156 (254)
T ss_dssp             HTSTTCCCSEEEEETCTT-THHHHHTHHHHCS-EEEEEESCHHHHHHHHHHTTTSSEEEEEESCG---GGC-----CCCS
T ss_pred             hhCCCCCCCeEEEecccC-ChhhHHHHhhcCc-eEEEEcCCHHHHHhhhccccccccceeEEccc---ccc-----ccCC
Confidence            445556778899889876 7777787776655 999999999988888753 22 2  2222111   111     1122


Q ss_pred             CCccEEEEcCCC-----H---HHHHHHHHHhccCCceEEEEc
Q 018022          271 GGADYCFECVGL-----A---SLVQEAYACCRKGWGKTIVLG  304 (362)
Q Consensus       271 ~g~d~vid~~g~-----~---~~~~~~~~~l~~~~G~iv~~G  304 (362)
                      +.||+|+..---     +   ..++.+.+.|+++ |.+++.-
T Consensus       157 ~~fD~I~~~~vl~hl~d~d~~~~l~~~~~~Lkpg-G~iii~e  197 (254)
T d1xtpa_         157 NTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPN-GYIFFKE  197 (254)
T ss_dssp             SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CccceEEeeccccccchhhhHHHHHHHHHhcCCC-cEEEEEe
Confidence            379999874332     1   3477889999997 9988753

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.27  E-value=0.85  Score=34.64  Aligned_cols=70  Identities=14%  Similarity=0.223  Sum_probs=47.1

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHhcCC------cEEEcCCCCCCccHHHHHHhhcCCCcc
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRFGV------TEFVNSKNCGDKSVSQIIIDMTDGGAD  274 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~~g~------~~vv~~~~~~~~~~~~~i~~~~~~g~d  274 (362)
                      .+|.|+|| |.+|...+.++...+. ..++.++.++.+.+.+.-.-.      ...+..     .+..+.++     +.|
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~-----~~~~~~~~-----~aD   70 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGP-----EQLPDCLK-----GCD   70 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESG-----GGHHHHHT-----TCS
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcC-----CChHHHhC-----CCC
Confidence            37899997 9999999999988885 689999988765444322111      112221     23444332     599


Q ss_pred             EEEEcCCC
Q 018022          275 YCFECVGL  282 (362)
Q Consensus       275 ~vid~~g~  282 (362)
                      +|+-+.|.
T Consensus        71 ivVitag~   78 (144)
T d1mlda1          71 VVVIPAGV   78 (144)
T ss_dssp             EEEECCSC
T ss_pred             EEEECCCc
Confidence            99999885

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=88.14  E-value=0.36  Score=38.61  Aligned_cols=39  Identities=18%  Similarity=0.271  Sum_probs=33.0

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR  244 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~  244 (362)
                      +|.|+|.|-+|+..+.++ +.|+ .|+++|.++++.+.+++
T Consensus         2 kI~ViGlG~vGl~~a~~~-a~g~-~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           2 KIAVAGSGYVGLSLGVLL-SLQN-EVTIVDILPSKVDKINN   40 (196)
T ss_dssp             EEEEECCSHHHHHHHHHH-TTTS-EEEEECSCHHHHHHHHT
T ss_pred             EEEEECCChhHHHHHHHH-HCCC-cEEEEECCHHHHHHHhh
Confidence            578899999999877655 5798 99999999999888764

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=88.14  E-value=0.59  Score=36.54  Aligned_cols=94  Identities=19%  Similarity=0.293  Sum_probs=63.4

Q ss_pred             ccccchhhhHHHHHHhcCC-CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCC
Q 018022          181 LLSCGVSTGVGAAWRTANV-EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGD  258 (362)
Q Consensus       181 ~~~~~~~ta~~~l~~~~~~-~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~  258 (362)
                      .++|.....+. +.+..++ -.|.+|+|+|. ..+|.-...++...|+ +|+.+.+..                      
T Consensus        16 ~~PcTp~aI~~-lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~ga-tVt~~h~~t----------------------   71 (166)
T d1b0aa1          16 LRPCTPRGIVT-LLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFT----------------------   71 (166)
T ss_dssp             SCCHHHHHHHH-HHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSC----------------------
T ss_pred             CCCchHHHHHH-HHHHcCcccccceEEEEeccccccHHHHHHHHHhhc-ccccccccc----------------------
Confidence            34544333333 3344443 46899999998 6699999999999999 887775432                      


Q ss_pred             ccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022          259 KSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       259 ~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      .++.+.+++     +|++|-++|.+..+.  -+.++++ ..++.+|..
T Consensus        72 ~~l~~~~~~-----ADivI~a~G~p~~i~--~~~vk~g-~vvIDvGi~  111 (166)
T d1b0aa1          72 KNLRHHVEN-----ADLLIVAVGKPGFIP--GDWIKEG-AIVIDVGIN  111 (166)
T ss_dssp             SCHHHHHHH-----CSEEEECSCCTTCBC--TTTSCTT-CEEEECCCE
T ss_pred             chhHHHHhh-----hhHhhhhccCccccc--ccccCCC-cEEEecCce
Confidence            334444443     799999999886443  3466776 788888864

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=88.12  E-value=0.76  Score=35.28  Aligned_cols=144  Identities=13%  Similarity=0.003  Sum_probs=80.6

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHcCC--CEEEEEcCCchHHHHHHhcCCcE-EEcCCCCCCccHHHHHHhhcCCCccEEE
Q 018022          202 GSTVVIFGL-GSIGLAVAEGARLCGA--TRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTDGGADYCF  277 (362)
Q Consensus       202 g~~vlI~Ga-g~~G~~a~~la~~~g~--~~vi~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~~g~d~vi  277 (362)
                      |=+|.|+|| |-+|.-.++++..+.+  ..+..+.+++..-+......... +.+..+   .++         ...|+++
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~~~~~~~~~~~~---~~~---------~~~d~~f   68 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTE---TAF---------EGVDIAL   68 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEETTEEEEEEECCT---TTT---------TTCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccccccCCcccccccch---hhh---------hhhhhhh
Confidence            347999999 9999999999987743  34554443221111111111111 111111   111         1689999


Q ss_pred             EcCCCHHHHHHHHHHhccCCceEEEEccCCCC-CccccCHHHHHh----cCcEEEEeeccCCCccccHHHHHHHHHcCCc
Q 018022          278 ECVGLASLVQEAYACCRKGWGKTIVLGVDQPG-SQLSLSSFEVLH----SGKILMGSLFGGLKAKSDIPILLKRYMDKWS  352 (362)
Q Consensus       278 d~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~-~~~~~~~~~~~~----~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l  352 (362)
                      -+.+.........+....+ -+++..+..-.. ...+.-..++..    +...+...-  +. ....+.-+.-++++|.|
T Consensus        69 ~~~~~~~s~~~~~~~~~~~-~~VIDlSsdfR~~~~~~~~~pe~n~~~~~~~~~iIAnP--gC-~tt~i~~l~PL~~~~li  144 (154)
T d2gz1a1          69 FSAGSSTSAKYAPYAVKAG-VVVVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIACP--NA-AWNSVQIAETLHERGLV  144 (154)
T ss_dssp             ECSCHHHHHHHHHHHHHTT-CEEEECSSTTTTCTTSCBCCHHHHGGGGGGCCSEEECC--CT-HHHHHHHHHHHHHTTCC
T ss_pred             hccCccchhhHHhhhcccc-ceehhcChhhhccCCcccccchhhHHHhcCcCceEECC--CC-HHHHHHHHHHHHHhcCC
Confidence            9999877666777777876 788888764211 122222223222    222333321  22 12334556788899999


Q ss_pred             ccceecccC
Q 018022          353 YVPFSGTRA  361 (362)
Q Consensus       353 ~~~~~~~~~  361 (362)
                      ++.+..+|.
T Consensus       145 k~~~~~~~~  153 (154)
T d2gz1a1         145 RPTAELKFE  153 (154)
T ss_dssp             SCCSSCCSC
T ss_pred             Cccceeeec
Confidence            998887763

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=88.09  E-value=0.9  Score=35.53  Aligned_cols=92  Identities=17%  Similarity=0.218  Sum_probs=56.3

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch--HHHHHHhc----CC---c---------------EEEcCCCCCCc
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRF----GV---T---------------EFVNSKNCGDK  259 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~--~~~~~~~~----g~---~---------------~vv~~~~~~~~  259 (362)
                      +|.|.|-|-+|+++.+++...++ .++++--...  .+..+-++    |.   .               .+...++    
T Consensus         2 kigINGfGRIGR~~~R~l~~~~i-~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~----   76 (168)
T d2g82a1           2 KVGINGFGRIGRQVFRILHSRGV-EVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKD----   76 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTC-CEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSS----
T ss_pred             EEEEECCcHHHHHHHHHHhcCCC-EEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCC----
Confidence            57899999999999999888888 5555532222  22223222    21   1               0111111    


Q ss_pred             cHHHHHHhhcCC--CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022          260 SVSQIIIDMTDG--GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       260 ~~~~~i~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                           ..++...  ++|+|+||+|.-...+.+...+..+ -+=|++..+
T Consensus        77 -----p~~i~W~~~gvdiViEcTG~f~~~~~~~~hl~~g-akkViiSAP  119 (168)
T d2g82a1          77 -----PKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGG-AKKVIITAP  119 (168)
T ss_dssp             -----GGGCCTGGGTEEEEEECSSSCCBHHHHTHHHHTT-CSEEEESSC
T ss_pred             -----hHHCcccccCCceeEeccccccchHHhhhhhccc-cceeeeccc
Confidence                 1222222  7999999999776567777888876 666666553

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=88.05  E-value=0.73  Score=34.12  Aligned_cols=62  Identities=19%  Similarity=0.201  Sum_probs=50.4

Q ss_pred             HHHhcCCCCCCEEEEE-CCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022          193 AWRTANVEVGSTVVIF-GLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK  254 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~-Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~  254 (362)
                      ..+.++++.-+.+++. ..-..-+.+.++++..|..++++...+++..+.++++|++.++++.
T Consensus        57 ~l~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~p~  119 (132)
T d1lssa_          57 TLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVSPE  119 (132)
T ss_dssp             HHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEECHH
T ss_pred             hhhhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEECHH
Confidence            4577788877777665 4444567888899999998999999999999999999999999764

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=87.80  E-value=0.24  Score=38.83  Aligned_cols=30  Identities=30%  Similarity=0.223  Sum_probs=26.8

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcC
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDV  234 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~  234 (362)
                      .|+|+|+|+.|+.++..+...|. +++++++
T Consensus         3 DViIIGgGpaGl~AAi~aar~G~-~v~iie~   32 (184)
T d1fl2a1           3 DVLIVGSGPAGAAAAIYSARKGI-RTGLMGE   32 (184)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTC-CEEEECS
T ss_pred             cEEEECcCHHHHHHHHHHHHcCC-eEEEEEE
Confidence            47899999999999999999999 7888874

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=87.80  E-value=0.22  Score=40.33  Aligned_cols=32  Identities=28%  Similarity=0.278  Sum_probs=27.9

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      .|+|+|+|+.|+.++..+...|. +|+++++.+
T Consensus         5 DvvVIGgGpaGl~aA~~aa~~G~-kV~vie~~~   36 (221)
T d1dxla1           5 DVVIIGGGPGGYVAAIKAAQLGF-KTTCIEKRG   36 (221)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTC-CEEEEECSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEEecC
Confidence            47888999999999999999999 888887653

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.72  E-value=0.42  Score=38.43  Aligned_cols=69  Identities=16%  Similarity=0.271  Sum_probs=43.3

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCC-EEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV  280 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~  280 (362)
                      .+|||+|+ |.+|...+..+...|.. +|++..+++..       ....+ ....   .++.+.... ....+|.||.|+
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-------~~~~~-~~~~---~d~~~~~~~-~~~~~d~vi~~~   70 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------EHPRL-DNPV---GPLAELLPQ-LDGSIDTAFCCL   70 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------CCTTE-ECCB---SCHHHHGGG-CCSCCSEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-------hcccc-cccc---cchhhhhhc-cccchheeeeee
Confidence            68999998 99999999988888852 67766654311       00111 1111   334443333 233689999998


Q ss_pred             CCH
Q 018022          281 GLA  283 (362)
Q Consensus       281 g~~  283 (362)
                      |..
T Consensus        71 g~~   73 (212)
T d2a35a1          71 GTT   73 (212)
T ss_dssp             CCC
T ss_pred             eee
Confidence            864

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=87.72  E-value=0.25  Score=42.63  Aligned_cols=34  Identities=21%  Similarity=0.287  Sum_probs=29.7

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE  237 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~  237 (362)
                      -.|+|+|||+.|++++..++..|. .+++++++++
T Consensus         8 ~dV~IIGAG~sGl~~a~~L~~~G~-~v~i~Ek~~~   41 (298)
T d1w4xa1           8 VDVLVVGAGFSGLYALYRLRELGR-SVHVIETAGD   41 (298)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             CCEEEECccHHHHHHHHHHHhCCC-CEEEEEcCCC
Confidence            358999999999999999999999 8999987643

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=87.71  E-value=2.4  Score=33.66  Aligned_cols=108  Identities=19%  Similarity=0.290  Sum_probs=68.3

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHc-CCCEEEEEcCCchHHHHHHh----cCCc-EEEcCCCCCCccHHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIII  266 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~~i~  266 (362)
                      +.+...+++++.++=.++|. |..+-.+++.. +. +|+++|++++.++.+++    ++.. .+++.+-   .++...+.
T Consensus        15 vi~~l~~~~~~~~lD~t~G~-Gghs~~il~~~~~~-~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f---~~~~~~~~   89 (192)
T d1m6ya2          15 VIEFLKPEDEKIILDCTVGE-GGHSRAILEHCPGC-RIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSY---READFLLK   89 (192)
T ss_dssp             HHHHHCCCTTCEEEETTCTT-SHHHHHHHHHCTTC-EEEEEESCHHHHHHHHHHTGGGTTTEEEEECCG---GGHHHHHH
T ss_pred             HHHhhCCCCCCEEEEecCCC-cHHHHHHHhcCCCC-eEEEeechHHHHHHHHHhhccccccccchhHHH---hhHHHHHH
Confidence            34556788888664433344 33333444544 45 99999999999888865    3322 2444332   45555555


Q ss_pred             hhcCCCccEEEEcCCCH---------------HHHHHHHHHhccCCceEEEEccC
Q 018022          267 DMTDGGADYCFECVGLA---------------SLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       267 ~~~~~g~d~vid~~g~~---------------~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      ....+.+|.|+--.|..               ..+..+.+.++++ |+++.+...
T Consensus        90 ~~~~~~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~g-G~l~ii~f~  143 (192)
T d1m6ya2          90 TLGIEKVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPG-GRIVVISFH  143 (192)
T ss_dssp             HTTCSCEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEE-EEEEEEESS
T ss_pred             HcCCCCcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCC-Ceeeeeccc
Confidence            55444898886555541               3467788899998 999888653

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=87.67  E-value=0.51  Score=36.41  Aligned_cols=41  Identities=22%  Similarity=0.221  Sum_probs=34.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHH
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE  240 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~  240 (362)
                      ++..+|.|+|+|.+|...+.++...+...++.+|.++++.+
T Consensus         5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~~   45 (154)
T d1pzga1           5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPE   45 (154)
T ss_dssp             SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHH
T ss_pred             cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccch
Confidence            45678999999999988888888888778999998887643

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=87.47  E-value=0.32  Score=41.47  Aligned_cols=37  Identities=27%  Similarity=0.337  Sum_probs=31.6

Q ss_pred             CCCEEEEECC-C--hHHHHHHHHHHHcCCCEEEEEcCCchH
Q 018022          201 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEK  238 (362)
Q Consensus       201 ~g~~vlI~Ga-g--~~G~~a~~la~~~g~~~vi~~~~~~~~  238 (362)
                      .|.++||+|+ |  ++|++.++.+...|+ +|+.++++++.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga-~Vvi~~~~~~~   46 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVPAL   46 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCchhh
Confidence            5789999997 5  799999999999999 89888876543

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=87.46  E-value=2.4  Score=30.90  Aligned_cols=93  Identities=14%  Similarity=0.006  Sum_probs=62.7

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCH
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA  283 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~  283 (362)
                      .++|.|.|.+|...++.++  +. .+++++.++++.+.++..|...+. -+.    .-.+.+++..=..++.++-++...
T Consensus         2 HivI~G~g~~g~~l~~~L~--~~-~i~vi~~d~~~~~~~~~~~~~~i~-Gd~----~~~~~L~~a~i~~A~~vi~~~~~d   73 (129)
T d2fy8a1           2 HVVICGWSESTLECLRELR--GS-EVFVLAEDENVRKKVLRSGANFVH-GDP----TRVSDLEKANVRGARAVIVNLESD   73 (129)
T ss_dssp             CEEEESCCHHHHHHHHTSC--GG-GEEEEESCTTHHHHHHHTTCEEEE-SCT----TSHHHHHHTTCTTCSEEEECCSSH
T ss_pred             EEEEECCCHHHHHHHHHHc--CC-CCEEEEcchHHHHHHHhcCccccc-ccc----CCHHHHHHhhhhcCcEEEEeccch
Confidence            5788899999998877664  44 677788899999988888875443 332    224455554323789999988876


Q ss_pred             HH---HHHHHHHhccCCceEEEEcc
Q 018022          284 SL---VQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       284 ~~---~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ..   +-...+.+.+. .+++..-.
T Consensus        74 ~~n~~~~~~~r~~~~~-~~iia~~~   97 (129)
T d2fy8a1          74 SETIHCILGIRKIDES-VRIIAEAE   97 (129)
T ss_dssp             HHHHHHHHHHHHHCSS-SCEEEECS
T ss_pred             hhhHHHHHHHHHHCCC-ceEEEEEc
Confidence            32   23455566675 67666654

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=87.41  E-value=3.6  Score=35.74  Aligned_cols=104  Identities=17%  Similarity=0.164  Sum_probs=68.2

Q ss_pred             CCCCCEEEEECCChHHHHHHHHH-HHcCCCEEEEEcCCchHHHH-HHhc----CCcEEEcCCCCCCccHHHHHHhhcCCC
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGA-RLCGATRIIGVDVISEKFEI-GKRF----GVTEFVNSKNCGDKSVSQIIIDMTDGG  272 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la-~~~g~~~vi~~~~~~~~~~~-~~~~----g~~~vv~~~~~~~~~~~~~i~~~~~~g  272 (362)
                      .+...++.|+|+|..+...++.. ..+++++|.+.+++.++.+. ++++    |.. +...     .++.+.++     +
T Consensus       125 ~~da~~l~iiG~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~-v~~~-----~s~~eav~-----~  193 (340)
T d1x7da_         125 RPNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLT-IRRA-----SSVAEAVK-----G  193 (340)
T ss_dssp             CTTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCE-EEEC-----SSHHHHHT-----T
T ss_pred             ccCCceEEEEcccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCC-ceec-----CCHHHHHh-----c
Confidence            35567899999999998877755 46789999999999877554 3333    333 3222     23444443     5


Q ss_pred             ccEEEEcCCCHH---HHHHHHHHhccCCceEEEEccCCCCCccccCHH
Q 018022          273 ADYCFECVGLAS---LVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF  317 (362)
Q Consensus       273 ~d~vid~~g~~~---~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~  317 (362)
                      .|+|+-|+.++.   .+.  ...++++ -.++.+|.+.+.+ -+++..
T Consensus       194 ADIi~t~Tas~s~~Pv~~--~~~l~pG-~hI~aiGs~~p~~-~Eld~~  237 (340)
T d1x7da_         194 VDIITTVTADKAYATIIT--PDMLEPG-MHLNAVGGDCPGK-TELHAD  237 (340)
T ss_dssp             CSEEEECCCCSSEEEEEC--GGGCCTT-CEEEECSCCBTTB-EEECHH
T ss_pred             CCceeeccccCCCCcccc--hhhcCCC-CEEeecccchhhh-hccCHH
Confidence            899998886531   122  2568886 7888998865433 456654

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=87.37  E-value=0.13  Score=40.67  Aligned_cols=82  Identities=18%  Similarity=0.142  Sum_probs=51.6

Q ss_pred             EEEEECCChHHHHHHHHHHHc-CCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022          204 TVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  282 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~  282 (362)
                      +|.|+|.|.+|...+...+.. +++-+-+.++++++.   ..   ..+..+.+     .    ..+. ..+|+|+.|++.
T Consensus         5 rvgiiG~G~ig~~~~~~l~~~~~~elvav~~~~~~~~---~~---~~~~~~~~-----~----~~~~-~~~D~Vvi~tp~   68 (170)
T d1f06a1           5 RVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLD---TK---TPVFDVAD-----V----DKHA-DDVDVLFLCMGS   68 (170)
T ss_dssp             EEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCS---SS---SCEEEGGG-----G----GGTT-TTCSEEEECSCT
T ss_pred             eEEEECChHHHHHHHHHHHhCCCcEEEEEEecccccc---cc---cccccchh-----h----hhhc-cccceEEEeCCC
Confidence            588999999999888877765 563444445443321   11   11222211     1    1111 259999999998


Q ss_pred             HHHHHHHHHHhccCCceEEE
Q 018022          283 ASLVQEAYACCRKGWGKTIV  302 (362)
Q Consensus       283 ~~~~~~~~~~l~~~~G~iv~  302 (362)
                      ....+.+.++|..| -.+++
T Consensus        69 ~~h~~~a~~aL~aG-~~vv~   87 (170)
T d1f06a1          69 ATDIPEQAPKFAQF-ACTVD   87 (170)
T ss_dssp             TTHHHHHHHHHTTT-SEEEC
T ss_pred             cccHHHHHHHHHCC-CcEEE
Confidence            87788999999995 45443

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=87.12  E-value=0.17  Score=40.30  Aligned_cols=35  Identities=20%  Similarity=0.218  Sum_probs=29.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      ++..|+|+|+|+.|+.++..+...|. +|+++++.+
T Consensus         4 k~~dVvIIGGGpaGl~AA~~~ar~g~-~v~iie~~~   38 (190)
T d1trba1           4 KHSKLLILGSGPAGYTAAVYAARANL-QPVLITGME   38 (190)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHTTTC-CCEEECCSS
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEEeec
Confidence            45679999999999999999999999 778877543

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=87.02  E-value=2.1  Score=33.29  Aligned_cols=95  Identities=16%  Similarity=0.251  Sum_probs=55.4

Q ss_pred             CEEEEECCChHHHHHHHHHHHc---CCCEEEEEcCC--chHHHHHHhc----CC---c---------------EEEcCCC
Q 018022          203 STVVIFGLGSIGLAVAEGARLC---GATRIIGVDVI--SEKFEIGKRF----GV---T---------------EFVNSKN  255 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~---g~~~vi~~~~~--~~~~~~~~~~----g~---~---------------~vv~~~~  255 (362)
                      .+|.|.|-|-+|+++.+.+..+   .+ .|+++-..  .+.+..+-++    |.   +               .+++.++
T Consensus         1 ~kIgINGfGRIGR~v~R~~~~~~~~~i-~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~   79 (169)
T d1hdgo1           1 ARVAINGFGRIGRLVYRIIYERKNPDI-EVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD   79 (169)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCTTC-EEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred             CEEEEECCChHHHHHHHHHHhccCCCE-EEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCC
Confidence            3688999999999999987643   35 66666322  2333333222    11   1               0121111


Q ss_pred             CCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022          256 CGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       256 ~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      -.+-+|    .+.   ++|+||||+|.-...+.+...+..+ -+=|++..+
T Consensus        80 p~~i~W----~~~---gvD~ViEcTG~f~t~~~~~~hl~~G-akkViiSAP  122 (169)
T d1hdgo1          80 PSKLPW----KDL---GVDFVIESTGVFRNREKAELHLQAG-AKKVIITAP  122 (169)
T ss_dssp             GGGSCH----HHH---TCCEEEECSSSCCBHHHHTHHHHTT-CSEEEESSC
T ss_pred             hhhCCc----ccc---CCCEEEEecceeccccchhhhccCC-CceEEEecc
Confidence            000112    111   7999999999865567778888876 655666654

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=86.89  E-value=0.45  Score=34.99  Aligned_cols=36  Identities=25%  Similarity=0.282  Sum_probs=31.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      +.+.+++|.|+|.+|+-+++.+..+|. +|..+.+.+
T Consensus        30 ~~~~~vvIiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   65 (122)
T d1xhca2          30 ENSGEAIIIGGGFIGLELAGNLAEAGY-HVKLIHRGA   65 (122)
T ss_dssp             HHHSEEEEEECSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             hcCCcEEEECCcHHHHHHHHHhhcccc-eEEEEeccc
Confidence            345789999999999999999999999 888888764

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=86.61  E-value=0.72  Score=40.52  Aligned_cols=31  Identities=26%  Similarity=0.327  Sum_probs=26.9

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcC
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDV  234 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~  234 (362)
                      +|||+|+ |.+|...+..+...|++.|++++.
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~   33 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK   33 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence            6899998 999999999998889877888775

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=86.57  E-value=0.29  Score=39.54  Aligned_cols=31  Identities=23%  Similarity=0.317  Sum_probs=27.6

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      .|+|+|+|+.|+.++..|..+|. +|.++++.
T Consensus         4 DvvVIG~G~aG~~aA~~a~~~G~-kV~iiE~~   34 (217)
T d1gesa1           4 DYIAIGGGSGGIASINRAAMYGQ-KCALIEAK   34 (217)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            37888999999999999999999 88888864

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=86.42  E-value=3.9  Score=32.04  Aligned_cols=105  Identities=18%  Similarity=0.266  Sum_probs=68.6

Q ss_pred             HHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc--EEEcCCCCCCccHHHHHHhhcC
Q 018022          194 WRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT--EFVNSKNCGDKSVSQIIIDMTD  270 (362)
Q Consensus       194 ~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~i~~~~~  270 (362)
                      .+...+++|..+ |.+. |.=|. ...+++. +. +|+++|++++.++.+++.-..  .+++..-   .++.+.+....-
T Consensus        11 l~~l~~~~g~~~-vD~T~G~GGh-s~~iL~~-~~-~viaiD~D~~ai~~a~~~~~~~~~~~~~~f---~~~~~~l~~~~~   83 (182)
T d1wg8a2          11 LDLLAVRPGGVY-VDATLGGAGH-ARGILER-GG-RVIGLDQDPEAVARAKGLHLPGLTVVQGNF---RHLKRHLAALGV   83 (182)
T ss_dssp             HHHHTCCTTCEE-EETTCTTSHH-HHHHHHT-TC-EEEEEESCHHHHHHHHHTCCTTEEEEESCG---GGHHHHHHHTTC
T ss_pred             HHhcCCCCCCEE-EEeCCCCcHH-HHHHhcc-cC-cEEEEhhhhhHHHHHhhccccceeEeehHH---HHHHHHHHHcCC
Confidence            344567888864 5554 54444 3344443 55 999999999998888874322  2444333   556666655543


Q ss_pred             CCccEEEEcCCCHH---------------HHHHHHHHhccCCceEEEEccC
Q 018022          271 GGADYCFECVGLAS---------------LVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       271 ~g~d~vid~~g~~~---------------~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      +.+|.|+=-.|..+               .+...++.++++ |+++.+...
T Consensus        84 ~~vdgIl~DLGvSs~qld~~~re~~~~~~~L~~~~~~lk~g-g~~~ii~fh  133 (182)
T d1wg8a2          84 ERVDGILADLGVSSFHLDDPSDELNALKEFLEQAAEVLAPG-GRLVVIAFH  133 (182)
T ss_dssp             SCEEEEEEECSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEE-EEEEEEECS
T ss_pred             CccCEEEEEccCCHHHhhcchHHHHHHHHHHHHHHhhhCCC-CeEEEEecc
Confidence            47888876666532               367888999998 999988763

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=86.41  E-value=0.72  Score=38.40  Aligned_cols=34  Identities=35%  Similarity=0.418  Sum_probs=30.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcC
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV  234 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~  234 (362)
                      -.|.+|+|.|.|.+|..+++++...|+ +|++++.
T Consensus        29 l~g~~v~IqGfGnVG~~~a~~L~~~Ga-kvv~vsD   62 (242)
T d1v9la1          29 IEGKTVAIQGMGNVGRWTAYWLEKMGA-KVIAVSD   62 (242)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEEC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEeec
Confidence            378999999999999999999999999 8887763

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.23  E-value=0.33  Score=39.45  Aligned_cols=32  Identities=31%  Similarity=0.292  Sum_probs=27.6

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      .|+|+|+|+.|+.++..|..+|. +|++++..+
T Consensus         7 DviVIG~GpAGl~aA~~aa~~G~-kV~lie~~~   38 (233)
T d1v59a1           7 DVVIIGGGPAGYVAAIKAAQLGF-NTACVEKRG   38 (233)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEEecC
Confidence            47888999999999999999999 888887653

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.19  E-value=0.3  Score=41.97  Aligned_cols=31  Identities=26%  Similarity=0.357  Sum_probs=27.8

Q ss_pred             EEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          205 VVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       205 vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      |+|+|+|..|+.++..++..|. +|+++++++
T Consensus         2 ViVIGaG~aGL~aA~~L~~~G~-~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGGGISGMAAAKLLHDSGL-NVVVLEARD   32 (383)
T ss_dssp             EEEECCBHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence            7889999999999999999999 899998654

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=86.14  E-value=0.63  Score=35.78  Aligned_cols=37  Identities=27%  Similarity=0.448  Sum_probs=31.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      ..+++|+|+|+|.+|.-++..+..+|++.|+++.+.+
T Consensus        43 ~~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          43 SIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             cCCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            4577899999999999999999999998888887644

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=86.04  E-value=1.5  Score=37.85  Aligned_cols=99  Identities=15%  Similarity=0.090  Sum_probs=64.9

Q ss_pred             cCCCCCCEEEEECC--ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc----EEEcCCCCCCccHHHHHH
Q 018022          197 ANVEVGSTVVIFGL--GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT----EFVNSKNCGDKSVSQIII  266 (362)
Q Consensus       197 ~~~~~g~~vlI~Ga--g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~----~vv~~~~~~~~~~~~~i~  266 (362)
                      ..+.+|++||=..+  |+++++    |...|+..|+.++.++..++.+++    .|.+    .++.      .+.-+.++
T Consensus       140 ~~~~~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~------~d~~~~l~  209 (317)
T d2b78a2         140 NGSAAGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVV------MDVFDYFK  209 (317)
T ss_dssp             HTTTBTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEE------SCHHHHHH
T ss_pred             HHhhCCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEE------ccHHHHHH
Confidence            56778999998854  655543    234677799999999998888764    2331    2343      23344444


Q ss_pred             hhc-CC-CccEEEEcCCC---------------HHHHHHHHHHhccCCceEEEEccC
Q 018022          267 DMT-DG-GADYCFECVGL---------------ASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       267 ~~~-~~-g~d~vid~~g~---------------~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      .+. .+ .||+||---+.               ...+..+++.|+++ |.+++...+
T Consensus       210 ~~~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pg-G~l~~~scs  265 (317)
T d2b78a2         210 YARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSEN-GLIIASTNA  265 (317)
T ss_dssp             HHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEE-EEEEEEECC
T ss_pred             HHHhhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeCC
Confidence            332 23 79999864331               13466788999997 998887653

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=86.01  E-value=0.75  Score=35.24  Aligned_cols=39  Identities=18%  Similarity=0.193  Sum_probs=33.6

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHH
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKF  239 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~  239 (362)
                      |..+|.|+|+|.+|...+.++...+...++.+|.++++.
T Consensus         2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~   40 (150)
T d1t2da1           2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMP   40 (150)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHH
T ss_pred             CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcc
Confidence            457899999999999888888888888999999888664

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=85.84  E-value=0.31  Score=41.88  Aligned_cols=32  Identities=16%  Similarity=0.313  Sum_probs=28.4

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      .|+|+|||..|+.++..+...|. +|.+++.++
T Consensus         3 dv~IIGaG~sGl~~A~~L~~~g~-~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGSGLFGAVCANELKKLNK-KVLVIEKRN   34 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGTC-CEEEECSSS
T ss_pred             cEEEECCcHHHHHHHHHHHhCCC-cEEEEECCC
Confidence            47899999999999999988898 999998754

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.82  E-value=1.3  Score=34.60  Aligned_cols=95  Identities=15%  Similarity=0.259  Sum_probs=63.4

Q ss_pred             hccccchhhhHHHHHHhcCCC-CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCC
Q 018022          180 CLLSCGVSTGVGAAWRTANVE-VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG  257 (362)
Q Consensus       180 a~~~~~~~ta~~~l~~~~~~~-~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~  257 (362)
                      +.++|.....+. +.+..+++ .|.+|+|+|. ..+|.-.+.++...|+ +|+.+.+..                     
T Consensus        17 ~~~PcTp~aii~-lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~ga-tVt~~~~~t---------------------   73 (170)
T d1a4ia1          17 CFIPCTPKGCLE-LIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSKT---------------------   73 (170)
T ss_dssp             CCCCHHHHHHHH-HHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC---------------------
T ss_pred             CCCCChHHHHHH-HHHHhCcccccceEEEEecCCccchHHHHHHHhccC-ceEEEeccc---------------------
Confidence            345544443433 34555544 7899999998 6699999999999999 888876532                     


Q ss_pred             CccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022          258 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       258 ~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                       .++.+.++     ..|+++-++|.+..+.  -+.++++ -.++.+|..
T Consensus        74 -~~l~~~~~-----~aDivi~a~G~~~~i~--~~~vk~g-~iviDvgi~  113 (170)
T d1a4ia1          74 -AHLDEEVN-----KGDILVVATGQPEMVK--GEWIKPG-AIVIDCGIN  113 (170)
T ss_dssp             -SSHHHHHT-----TCSEEEECCCCTTCBC--GGGSCTT-CEEEECCCB
T ss_pred             -ccHHHHHh-----hccchhhccccccccc--cccccCC-CeEeccCcc
Confidence             23322222     3788898888876433  3467776 777788753

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=85.80  E-value=0.93  Score=37.91  Aligned_cols=72  Identities=18%  Similarity=0.246  Sum_probs=43.5

Q ss_pred             EEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc--hHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcC
Q 018022          205 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS--EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECV  280 (362)
Q Consensus       205 vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~--~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~  280 (362)
                      |||+|+ |.+|...+..+...|...|+++++-.  .+.....+.......+.     .++...+.....- .++.++-+.
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~a   76 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDK-----EDFLIQIMAGEEFGDVEAIFHEG   76 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEH-----HHHHHHHHTTCCCSSCCEEEECC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccccchhhhccc-----hHHHHHHhhhhcccchhhhhhhc
Confidence            799988 99999998888888975788886322  23333444443333322     2333444333333 677777655


Q ss_pred             C
Q 018022          281 G  281 (362)
Q Consensus       281 g  281 (362)
                      +
T Consensus        77 a   77 (307)
T d1eq2a_          77 A   77 (307)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=85.66  E-value=0.38  Score=39.29  Aligned_cols=32  Identities=28%  Similarity=0.289  Sum_probs=28.2

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      .|+|+|+|+.|+.++..+..+|. +|+++++.+
T Consensus         8 DviIIG~GPaGlsaA~~aa~~G~-~V~viE~~~   39 (229)
T d1ojta1           8 DVVVLGGGPGGYSAAFAAADEGL-KVAIVERYK   39 (229)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-eEEEEeccC
Confidence            37888999999999999999999 889998654

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=85.57  E-value=0.39  Score=38.65  Aligned_cols=30  Identities=23%  Similarity=0.269  Sum_probs=26.8

Q ss_pred             EEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          205 VVIFGLGSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       205 vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      |+|+|+|+.|+.++..|...|. +|+++++.
T Consensus         6 viVIG~GpaGl~aA~~aar~G~-kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGAGPGGYVAAIRAAQLGQ-KVTIVEKG   35 (223)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecC
Confidence            6788999999999999999999 88888764

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=85.56  E-value=0.39  Score=40.01  Aligned_cols=94  Identities=17%  Similarity=0.168  Sum_probs=59.8

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EE--EcCCCCCCccHHHHHHhh-cC
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EF--VNSKNCGDKSVSQIIIDM-TD  270 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~v--v~~~~~~~~~~~~~i~~~-~~  270 (362)
                      ++++++||=+|+|. |..+..+++. |...|+++|.+++-++.+++    .+.. .+  +..+.   ..     ..+ ..
T Consensus        22 ~~~~~~VLDlGCG~-G~~~~~~~~~-~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~---~~-----~~~~~~   91 (252)
T d1ri5a_          22 TKRGDSVLDLGCGK-GGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDS---YG-----RHMDLG   91 (252)
T ss_dssp             CCTTCEEEEETCTT-TTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCT---TT-----SCCCCS
T ss_pred             CCCcCEEEEecccC-cHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcch---hh-----hccccc
Confidence            57899999999866 5556666665 54489999999998888764    3321 22  11111   00     011 12


Q ss_pred             CCccEEEEcCCCH----------HHHHHHHHHhccCCceEEEE
Q 018022          271 GGADYCFECVGLA----------SLVQEAYACCRKGWGKTIVL  303 (362)
Q Consensus       271 ~g~d~vid~~g~~----------~~~~~~~~~l~~~~G~iv~~  303 (362)
                      +.||+|+......          ..+..+.+.|+++ |.++..
T Consensus        92 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~g-G~~i~~  133 (252)
T d1ri5a_          92 KEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPG-GYFIMT  133 (252)
T ss_dssp             SCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEE-EEEEEE
T ss_pred             ccceEEEEcceeeecCCCHHHHHHHHHHHhceeCCC-CEEEEE
Confidence            2799998754321          3456677889998 988754

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=85.52  E-value=0.3  Score=42.26  Aligned_cols=32  Identities=28%  Similarity=0.288  Sum_probs=26.2

Q ss_pred             EEEEECCChHHHHHHHHHH-----HcCCCEEEEEcCCc
Q 018022          204 TVVIFGLGSIGLAVAEGAR-----LCGATRIIGVDVIS  236 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~-----~~g~~~vi~~~~~~  236 (362)
                      .|+|+|+|+.|++++.++.     ..|+ +|+++++.+
T Consensus         9 DV~IvGaG~aGl~lA~~La~~~~~~~G~-~v~vlEr~~   45 (360)
T d1pn0a1           9 DVLIVGAGPAGLMAARVLSEYVRQKPDL-KVRIIDKRS   45 (360)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHHHHSTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHhcccccCCC-cEEEEcCCC
Confidence            4899999999999877763     5789 899998764

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=85.46  E-value=2.1  Score=35.67  Aligned_cols=33  Identities=27%  Similarity=0.456  Sum_probs=29.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEc
Q 018022          200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVD  233 (362)
Q Consensus       200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~  233 (362)
                      -.|.+|+|.|-|.+|..+++.+...|+ +|++++
T Consensus        34 l~g~~v~IQGfGnVG~~~a~~L~e~Ga-kvvavs   66 (255)
T d1bgva1          34 LVGKTVALAGFGNVAWGAAKKLAELGA-KAVTLS   66 (255)
T ss_dssp             STTCEEEECCSSHHHHHHHHHHHHHTC-EEEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEe
Confidence            367899999999999999999999999 887775

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=85.10  E-value=0.38  Score=38.93  Aligned_cols=31  Identities=29%  Similarity=0.254  Sum_probs=28.0

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      .++|+|+|+.|+.++..|..+|. +|+++++.
T Consensus         7 DlvVIG~GpaGl~aA~~aa~~G~-~V~liE~~   37 (220)
T d1lvla1           7 TLLIIGGGPGGYVAAIRAGQLGI-PTVLVEGQ   37 (220)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEecC
Confidence            47888999999999999999999 99999865

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=84.98  E-value=3.4  Score=31.95  Aligned_cols=92  Identities=22%  Similarity=0.281  Sum_probs=55.4

Q ss_pred             EEEEECCChHHHHHHHHHHHcC-CCEEEEEcCCchH--HHHHHhc----CC---cE---------------EEcCCCCCC
Q 018022          204 TVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEK--FEIGKRF----GV---TE---------------FVNSKNCGD  258 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~~~~~--~~~~~~~----g~---~~---------------vv~~~~~~~  258 (362)
                      +|.|.|-|-+|+++.+++.... + .++++.....-  +..+-++    |.   +.               +.+.++  +
T Consensus         3 kigINGFGRIGR~v~R~~~~~~~i-~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~--p   79 (166)
T d1gado1           3 KVGINGFGRIGRIVFRAAQKRSDI-EIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERD--P   79 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSE-EEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS--G
T ss_pred             EEEEECCcHHHHHHHHHHhhCCCe-EEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCC--h
Confidence            5788899999999999887664 5 66666533322  2222221    11   10               111111  1


Q ss_pred             ccHHHHHHhhcC-C-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022          259 KSVSQIIIDMTD-G-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       259 ~~~~~~i~~~~~-~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                      .       ++.. . ++|+||||+|.-...+.+...+..+ -+=|++..+
T Consensus        80 ~-------~i~W~~~gvDiViEcTG~f~t~~~~~~hl~~g-akkViiSaP  121 (166)
T d1gado1          80 A-------NLKWDEVGVDVVAEATGLFLTDETARKHITAG-AKKVVMTGP  121 (166)
T ss_dssp             G-------GGCHHHHTCSEEEECSSSCCSHHHHTHHHHTT-CSEEEESSC
T ss_pred             H-------HCCccccCCCEEEEccccccCHHHHHHHhcCC-CceEEeecc
Confidence            1       1111 1 7999999999766567777888886 666777653

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.59  E-value=1.8  Score=37.18  Aligned_cols=30  Identities=23%  Similarity=0.213  Sum_probs=27.0

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEc
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVD  233 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~  233 (362)
                      ++|||+|+ |.+|...+..+...|. .|++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~-~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGY-LPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC-CEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcC-EEEEEE
Confidence            58999998 9999999999999998 888885

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=84.28  E-value=0.47  Score=39.53  Aligned_cols=32  Identities=22%  Similarity=0.113  Sum_probs=27.9

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      .|+|+|+|.+|++++.-+...|. +|+++++.+
T Consensus         6 DvvIIGaGi~Gls~A~~La~~G~-~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGGGIIGSAIAYYLAKENK-NTALFESGT   37 (276)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            48899999999998888888898 999999754

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=84.07  E-value=0.28  Score=41.07  Aligned_cols=100  Identities=13%  Similarity=0.102  Sum_probs=63.2

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc---EEEcCCCCCCccHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT---EFVNSKNCGDKSVSQII  265 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~---~vv~~~~~~~~~~~~~i  265 (362)
                      +.....+....+||=+|+|. |..+..+++...--++++++. ++.++.++    +.+..   ..+..+      +    
T Consensus        72 ~~~~~d~~~~~~VLDvGcG~-G~~~~~la~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~rv~~~~~D------~----  139 (253)
T d1tw3a2          72 PAAAYDWTNVRHVLDVGGGK-GGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGD------F----  139 (253)
T ss_dssp             HHHHSCCTTCSEEEEETCTT-SHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECC------T----
T ss_pred             HHhhcCCccCCEEEEeCCCC-CHHHHHHHHhcceeEEEEccC-HHHHHHHHHHHHHhhcccchhhcccc------c----
Confidence            45666778888999999865 778888888774338999986 44444433    33432   222211      1    


Q ss_pred             HhhcCCCccEEEEcCC-----CH---HHHHHHHHHhccCCceEEEEcc
Q 018022          266 IDMTDGGADYCFECVG-----LA---SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       266 ~~~~~~g~d~vid~~g-----~~---~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      .+..+.++|+|+-..-     .+   ..++.+.+.|+++ |++++.-.
T Consensus       140 ~~~~~~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPG-G~l~i~e~  186 (253)
T d1tw3a2         140 FEPLPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPG-GRILIHER  186 (253)
T ss_dssp             TSCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             hhhcccchhheeeccccccCCchhhHHHHHHHHHhcCCC-cEEEEEec
Confidence            0112236899885422     12   3477899999998 99988743

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=84.06  E-value=8.9  Score=31.99  Aligned_cols=101  Identities=18%  Similarity=0.194  Sum_probs=63.5

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc--hHHHHHHhcCCcEEEcC-------------------
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS--EKFEIGKRFGVTEFVNS-------------------  253 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~--~~~~~~~~~g~~~vv~~-------------------  253 (362)
                      +...++++.+|+..++|..|.+++..++..|.+-++++..+.  .+...++.+|+..+...                   
T Consensus        54 ~~g~~~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~~~~~~~~~~~~~~~~~~~~~~~  133 (302)
T d1fcja_          54 KRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASD  133 (302)
T ss_dssp             HHTCCCTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHTS
T ss_pred             HcCCCCCCceEEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHHHhccceEEeccccccchhhhHHHHHHhhh
Confidence            444567777777667899999999999999986555554333  46666777777543111                   


Q ss_pred             -------CCCCCc--------cHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhcc
Q 018022          254 -------KNCGDK--------SVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRK  295 (362)
Q Consensus       254 -------~~~~~~--------~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~  295 (362)
                             ....+.        .....+.+..++.+|++|-++|+..++.-....++.
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~ti~~Ei~e~~~~~~d~vv~~vG~GG~~~Gi~~~lk~  190 (302)
T d1fcja_         134 PQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKG  190 (302)
T ss_dssp             TTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHT
T ss_pred             ccceeccccccccchhHHHHhHHHHHHHHhcCCCCCEEEEcCCCccccccceeeeee
Confidence                   000001        122334444455689999999987666666655554

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=83.89  E-value=2.6  Score=35.66  Aligned_cols=103  Identities=12%  Similarity=0.179  Sum_probs=60.9

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EEcCCCCCCccHHHHHHhhc
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FVNSKNCGDKSVSQIIIDMT  269 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv~~~~~~~~~~~~~i~~~~  269 (362)
                      .....++|++||=.-|++=|-. .+++..+.-..|++.+.+..|++.++    .+|... ++...+   .....   ...
T Consensus        96 ~~L~~~~g~~vLD~CAaPGgKt-~~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~---~~~~~---~~~  168 (284)
T d1sqga2          96 TWLAPQNGEHILDLCAAPGGKT-THILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG---RYPSQ---WCG  168 (284)
T ss_dssp             HHHCCCTTCEEEEESCTTCHHH-HHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCT---TCTHH---HHT
T ss_pred             cccCccccceeEeccCccccch-hhhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccc---cccch---hcc
Confidence            3457899999998844332322 23333333248999999999986664    577753 232222   12111   112


Q ss_pred             CCCccEEEE---cCCCH-------------------------HHHHHHHHHhccCCceEEEEcc
Q 018022          270 DGGADYCFE---CVGLA-------------------------SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       270 ~~g~d~vid---~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      .+.||.|+-   |+|..                         ..+..+++.++++ |++|..-.
T Consensus       169 ~~~fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~g-G~lvYsTC  231 (284)
T d1sqga2         169 EQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG-GTLVYATC  231 (284)
T ss_dssp             TCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEE-EEEEEEES
T ss_pred             cccccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCC-ceEEEeee
Confidence            236887776   66642                         3456778889997 88775543

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=83.77  E-value=0.82  Score=37.16  Aligned_cols=96  Identities=10%  Similarity=0.023  Sum_probs=59.3

Q ss_pred             HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc--EEEcCCCCCCccHHHHHHhhcCCC
Q 018022          195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT--EFVNSKNCGDKSVSQIIIDMTDGG  272 (362)
Q Consensus       195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~i~~~~~~g  272 (362)
                      .......+.+||=+|+|. |..+..+++ .|. +|++++.+++.++.+++-..+  .++..+-   .++      ..++.
T Consensus        14 ~~~~~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~giD~s~~~i~~a~~~~~~~~~~~~~~~---~~~------~~~~~   81 (225)
T d2p7ia1          14 AFTPFFRPGNLLELGSFK-GDFTSRLQE-HFN-DITCVEASEEAISHAQGRLKDGITYIHSRF---EDA------QLPRR   81 (225)
T ss_dssp             HHGGGCCSSCEEEESCTT-SHHHHHHTT-TCS-CEEEEESCHHHHHHHHHHSCSCEEEEESCG---GGC------CCSSC
T ss_pred             HhhhhCCCCcEEEEeCCC-cHHHHHHHH-cCC-eEEEEeCcHHHhhhhhcccccccccccccc---ccc------ccccc
Confidence            334455677899999866 665555554 577 899999999999998764222  2333221   111      11237


Q ss_pred             ccEEEEcC-----CCH-HHHHHHH-HHhccCCceEEEE
Q 018022          273 ADYCFECV-----GLA-SLVQEAY-ACCRKGWGKTIVL  303 (362)
Q Consensus       273 ~d~vid~~-----g~~-~~~~~~~-~~l~~~~G~iv~~  303 (362)
                      ||+|+..-     ..+ ..+..+. ++|+++ |.+++.
T Consensus        82 fD~I~~~~vleh~~d~~~~l~~i~~~~Lk~g-G~l~i~  118 (225)
T d2p7ia1          82 YDNIVLTHVLEHIDDPVALLKRINDDWLAEG-GRLFLV  118 (225)
T ss_dssp             EEEEEEESCGGGCSSHHHHHHHHHHTTEEEE-EEEEEE
T ss_pred             cccccccceeEecCCHHHHHHHHHHHhcCCC-ceEEEE
Confidence            99998532     122 3345665 578997 887764

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=83.74  E-value=0.48  Score=38.10  Aligned_cols=30  Identities=20%  Similarity=0.302  Sum_probs=26.7

Q ss_pred             EEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          205 VVIFGLGSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       205 vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      |+|+|+|+.|+.|+..|...|. +|.++++.
T Consensus         6 viIIGgGpAGl~aA~~aar~G~-~V~viE~~   35 (229)
T d3lada1           6 VIVIGAGPGGYVAAIKSAQLGL-KTALIEKY   35 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTC-CEEEEECC
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-eEEEEecc
Confidence            7788999999999999999999 88888754

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=83.73  E-value=0.49  Score=37.52  Aligned_cols=31  Identities=16%  Similarity=0.099  Sum_probs=27.1

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcC
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDV  234 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~  234 (362)
                      .+|+|+|+|+.|+.++..+...|. +++++++
T Consensus         6 ~~VvIIGgGpaGl~aA~~~ar~g~-~v~vie~   36 (192)
T d1vdca1           6 TRLCIVGSGPAAHTAAIYAARAEL-KPLLFEG   36 (192)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTC-CCEEECC
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCC-cEEEEEe
Confidence            578999999999999999999999 7777764

>d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class II ketol-acid reductoisomerase (KARI)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=83.69  E-value=6.4  Score=31.75  Aligned_cols=90  Identities=17%  Similarity=0.187  Sum_probs=63.4

Q ss_pred             CEEEEECCChHHHHHHHHHHHc------CCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEE
Q 018022          203 STVVIFGLGSIGLAVAEGARLC------GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYC  276 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~------g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~v  276 (362)
                      .+|.|+|-|.-|.+.++-+|-.      |...++++.......+.+++.|+.. .+..   .....++++     ..|+|
T Consensus        45 KkIaViGYGsQG~AhAlNLrDSG~~~~sgv~V~VGLr~gs~S~~kA~~dGf~v-~~~~---v~~v~EAv~-----~ADiV  115 (226)
T d1qmga2          45 KQIGVIGWGSQAPAQAQNLKDSLTEAKSDVVVKIGLRKGSNSFAEARAAGFSE-ENGT---LGDMWETIS-----GSDLV  115 (226)
T ss_dssp             SEEEEECCSSHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCG-GGTC---EEEHHHHHH-----TCSEE
T ss_pred             CEEEEEEeccHHHHHHHhChhhcccccCCceEEEEeCCCChhHHHHHHcCCcc-CCCc---ccCHHHHHh-----hCCEE
Confidence            7899999999999999999984      4646777777767788888888641 0000   023444544     38999


Q ss_pred             EEcCCCH---HHHHHHHHHhccCCceEEE
Q 018022          277 FECVGLA---SLVQEAYACCRKGWGKTIV  302 (362)
Q Consensus       277 id~~g~~---~~~~~~~~~l~~~~G~iv~  302 (362)
                      +-.++..   ..++++...|+++ ..+.+
T Consensus       116 miLlPDe~Q~~vy~~I~p~Lk~G-~~L~F  143 (226)
T d1qmga2         116 LLLISDSAQADNYEKVFSHMKPN-SILGL  143 (226)
T ss_dssp             EECSCHHHHHHHHHHHHHHSCTT-CEEEE
T ss_pred             EEecchHHHHHHHHHHHHhcCCC-ceeee
Confidence            9999875   3455667788885 45444

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.53  E-value=0.54  Score=37.80  Aligned_cols=30  Identities=40%  Similarity=0.382  Sum_probs=26.9

Q ss_pred             EEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          205 VVIFGLGSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       205 vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      ++|+|+|+.|+.++..|...|. +|.+++..
T Consensus         6 viIIG~GpaG~~aA~~aar~G~-kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGGGSGGLASARRAAELGA-RAAVVESH   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            6788999999999999999999 88888754

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=83.41  E-value=0.51  Score=40.04  Aligned_cols=32  Identities=28%  Similarity=0.349  Sum_probs=26.6

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      .|+|+|+|.+|++++.-+...|..+|++++++
T Consensus         3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            58999999999987777767887579999875

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=83.19  E-value=0.48  Score=36.86  Aligned_cols=34  Identities=38%  Similarity=0.410  Sum_probs=27.6

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHcCCC-EEEEEcC
Q 018022          201 VGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDV  234 (362)
Q Consensus       201 ~g~~vlI~Gag~~G~~a~~la~~~g~~-~vi~~~~  234 (362)
                      ++++|+|+|+|++|..++..++.+|.+ +|+....
T Consensus         2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v~v~~~~~   36 (185)
T d1q1ra1           2 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGD   36 (185)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCCCEEEECCcHHHHHHHHHHHHcCCceEEEEecC
Confidence            578999999999999999999999874 4444443

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=83.04  E-value=2.9  Score=33.30  Aligned_cols=74  Identities=23%  Similarity=0.334  Sum_probs=47.9

Q ss_pred             HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC-CcEEEcCCCCCCccHHHHHHhhcCCC
Q 018022          194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-VTEFVNSKNCGDKSVSQIIIDMTDGG  272 (362)
Q Consensus       194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g-~~~vv~~~~~~~~~~~~~i~~~~~~g  272 (362)
                      ....++ .|++||=.|+|. |..++. +..+|+.+|++++.+++..+.+++.- .-.++..+      +    .+ .++.
T Consensus        42 ~~~~dl-~Gk~VLDlGcGt-G~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D------~----~~-l~~~  107 (197)
T d1ne2a_          42 YNDGNI-GGRSVIDAGTGN-GILACG-SYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVAD------V----SE-ISGK  107 (197)
T ss_dssp             HHHTSS-BTSEEEEETCTT-CHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECC------G----GG-CCCC
T ss_pred             HHcCCC-CCCEEEEeCCCC-cHHHHH-HHHcCCCcccccccCHHHHHHHHHccccccEEEEe------h----hh-cCCc
Confidence            344454 689999998864 444443 44567779999999999988888743 23444432      1    11 2347


Q ss_pred             ccEEEEcCC
Q 018022          273 ADYCFECVG  281 (362)
Q Consensus       273 ~d~vid~~g  281 (362)
                      ||+||-..+
T Consensus       108 fD~Vi~NPP  116 (197)
T d1ne2a_         108 YDTWIMNPP  116 (197)
T ss_dssp             EEEEEECCC
T ss_pred             ceEEEeCcc
Confidence            999987533

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=82.92  E-value=0.71  Score=39.30  Aligned_cols=32  Identities=22%  Similarity=0.237  Sum_probs=26.9

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      .+|||+|+ |.+|...+..+...|. .+++++..
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~-~vi~~~~~   35 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGD-VELVLRTR   35 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTT-EEEECCCT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcC-EEEEecCc
Confidence            47999998 9999999999998998 67766543

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.88  E-value=0.59  Score=40.42  Aligned_cols=32  Identities=31%  Similarity=0.273  Sum_probs=28.4

Q ss_pred             EE-EEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          204 TV-VIFGL-GSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       204 ~v-lI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      +| ||+|+ |.+|...+..+...|+ +|+++++..
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~-~V~~i~r~~   35 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGY-EVHGIVRRS   35 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence            57 99998 9999999999998999 999998854

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.82  E-value=0.57  Score=39.87  Aligned_cols=32  Identities=31%  Similarity=0.471  Sum_probs=28.2

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS  236 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~  236 (362)
                      .|+|+|+|..|+.++.-|...|. +|+++++.+
T Consensus        18 DVlVIG~G~aGl~aA~~la~~G~-~V~lvEK~~   49 (308)
T d1y0pa2          18 DVVVVGSGGAGFSAAISATDSGA-KVILIEKEP   49 (308)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEecCC
Confidence            58999999999999999999999 899998654

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.66  E-value=1.3  Score=37.08  Aligned_cols=102  Identities=11%  Similarity=0.022  Sum_probs=57.9

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHH----c-CCC-EEEEEcCCchHHHHHHhc-C----C-cEEEcCCCCCCccHH---H
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARL----C-GAT-RIIGVDVISEKFEIGKRF-G----V-TEFVNSKNCGDKSVS---Q  263 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~----~-g~~-~vi~~~~~~~~~~~~~~~-g----~-~~vv~~~~~~~~~~~---~  263 (362)
                      .++..+||=+|+|. |..+..+++.    . +.. .+++++.++.-++.+++. .    . ...++...   ..+.   .
T Consensus        38 ~~~~~~VLDiGcG~-G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~---~~~~~~~~  113 (280)
T d1jqea_          38 TKSEIKILSIGGGA-GEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHK---ETSSEYQS  113 (280)
T ss_dssp             TCSEEEEEEETCTT-SHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEEC---SCHHHHHH
T ss_pred             CCCCCeEEEEcCCC-CHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchh---hhhhhhcc
Confidence            34455788888754 3333333332    1 221 678999998888777652 1    1 11222222   2222   2


Q ss_pred             HHHhhc-CCCccEEEEcCC-----C-HHHHHHHHHHhccCCceEEEEcc
Q 018022          264 IIIDMT-DGGADYCFECVG-----L-ASLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       264 ~i~~~~-~~g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      ...... ++.||+|+-.-.     . ..+++.+.+.|+++ |.+++.-.
T Consensus       114 ~~~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~Lkpg-G~l~i~~~  161 (280)
T d1jqea_         114 RMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTN-AKMLIIVV  161 (280)
T ss_dssp             HHTTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             hhcccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCC-CEEEEEEe
Confidence            222222 238999987333     2 25688999999998 98877644

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=82.49  E-value=0.68  Score=37.58  Aligned_cols=33  Identities=15%  Similarity=0.118  Sum_probs=26.8

Q ss_pred             EEEEECCChHHHHHHHHHHH--cCCCEEEEEcCCch
Q 018022          204 TVVIFGLGSIGLAVAEGARL--CGATRIIGVDVISE  237 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~--~g~~~vi~~~~~~~  237 (362)
                      +|+|+|+|+.|+.|+..++.  .|+ .|+++++.+.
T Consensus         3 kv~iIGaGpaGl~aA~~L~~~~~~~-~V~v~e~~~~   37 (230)
T d1cjca2           3 QICVVGSGPAGFYTAQHLLKHHSRA-HVDIYEKQLV   37 (230)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSSC-EEEEECSSSS
T ss_pred             eEEEECccHHHHHHHHHHHhcCCCC-eEEEEeCCCC
Confidence            79999999999999886654  367 8998887653

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=82.46  E-value=7.1  Score=33.20  Aligned_cols=108  Identities=20%  Similarity=0.159  Sum_probs=63.9

Q ss_pred             HhcCCCCCCEEEEE-CCChHHHHHHHHHHHcCCCEEEEEcCC--chHHHHHHhcCCcEEEcCCC----------------
Q 018022          195 RTANVEVGSTVVIF-GLGSIGLAVAEGARLCGATRIIGVDVI--SEKFEIGKRFGVTEFVNSKN----------------  255 (362)
Q Consensus       195 ~~~~~~~g~~vlI~-Gag~~G~~a~~la~~~g~~~vi~~~~~--~~~~~~~~~~g~~~vv~~~~----------------  255 (362)
                      +...++.+...+|. .+|..|.+.+..++.+|++-++++...  ..|++.++.+|+..++....                
T Consensus        57 ~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~  136 (320)
T d1z7wa1          57 KKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAK  136 (320)
T ss_dssp             HTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHH
T ss_pred             HcCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhccCcceEEeeccccccccchhHHHHHHh
Confidence            33445566555555 569999999999999999544444333  35777788888864322110                


Q ss_pred             ----------CCCcc-------HHHHHHhhcCCCccEEEEcCCCHHHHHHHHHH---hccCCceEEEE
Q 018022          256 ----------CGDKS-------VSQIIIDMTDGGADYCFECVGLASLVQEAYAC---CRKGWGKTIVL  303 (362)
Q Consensus       256 ----------~~~~~-------~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~---l~~~~G~iv~~  303 (362)
                                .++.+       ....+.+...+.+|.++-++|+...+.-+...   ..+. -+++-+
T Consensus       137 ~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~-~~~igv  203 (320)
T d1z7wa1         137 TPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNAN-VKLYGV  203 (320)
T ss_dssp             CTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEE
T ss_pred             CCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcc-eeeecc
Confidence                      00111       12233333444689999999987655544444   4443 455544

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=82.35  E-value=0.39  Score=40.33  Aligned_cols=30  Identities=27%  Similarity=0.619  Sum_probs=22.9

Q ss_pred             EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      +|||+|+ |.+|...+..+...|  .++++++.
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g--~~v~~~~~   32 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVG--NLIALDVH   32 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTS--EEEEECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCC--CEEEEECC
Confidence            5899998 999999888777666  45555544

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.20  E-value=1  Score=38.79  Aligned_cols=34  Identities=24%  Similarity=0.337  Sum_probs=29.8

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcC
Q 018022          200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV  234 (362)
Q Consensus       200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~  234 (362)
                      ....++||+|+ |.+|...+..+...|. .|+++++
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~-~V~~~d~   48 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDN   48 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEEC
Confidence            34568999998 9999999999999999 9999875

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=82.20  E-value=1.6  Score=32.00  Aligned_cols=62  Identities=6%  Similarity=-0.018  Sum_probs=47.6

Q ss_pred             HHhcCCCCCCEEEEE-CC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCC
Q 018022          194 WRTANVEVGSTVVIF-GL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN  255 (362)
Q Consensus       194 ~~~~~~~~g~~vlI~-Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~  255 (362)
                      .+.++++.-+.+++. +. -..-.++...++..+..++++-..+.+..+.++.+|+++|+++..
T Consensus        57 l~~a~i~~a~~vi~~~~~~~~~~~~~~~~~~~~~~~~iiar~~~~~~~~~l~~~Gad~vi~p~~  120 (134)
T d2hmva1          57 LLSLGIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHHKVLEKIGADRIIHPEK  120 (134)
T ss_dssp             HHHHTGGGCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHTCSEEECHHH
T ss_pred             hhccCCccccEEEEEcCchHHhHHHHHHHHHHcCCCcEEeecccHhHHHHHHHCCCCEEEChHH
Confidence            466777777776664 44 344566677777888779999999999999999999999998653

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=82.07  E-value=0.74  Score=39.82  Aligned_cols=35  Identities=20%  Similarity=0.247  Sum_probs=27.5

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCch
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISE  237 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~  237 (362)
                      .+|+|+|||+.|++++..++..|. ..|++.+++++
T Consensus         5 KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           5 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            579999999999988876665542 38999998753

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=82.07  E-value=0.16  Score=42.93  Aligned_cols=100  Identities=16%  Similarity=0.097  Sum_probs=62.7

Q ss_pred             HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCC-c--EEEcCCCCCCccHHHHH
Q 018022          193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGV-T--EFVNSKNCGDKSVSQII  265 (362)
Q Consensus       193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~-~--~vv~~~~~~~~~~~~~i  265 (362)
                      +.....++...+||=+|+|. |..+..+++...--++++++. ++-.+.++    +.|. +  .++..+.     +    
T Consensus        73 ~~~~~d~~~~~~vlDvG~G~-G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~d~-----~----  141 (256)
T d1qzza2          73 PADAYDWSAVRHVLDVGGGN-GGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDF-----F----  141 (256)
T ss_dssp             HHHTSCCTTCCEEEEETCTT-SHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCT-----T----
T ss_pred             HHhcCCCccCCEEEEECCCC-CHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeeeeec-----c----
Confidence            34555677888998888865 788888888874339999996 44444433    3343 2  2222211     1    


Q ss_pred             HhhcCCCccEEEEcC-----CCH---HHHHHHHHHhccCCceEEEEcc
Q 018022          266 IDMTDGGADYCFECV-----GLA---SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       266 ~~~~~~g~d~vid~~-----g~~---~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                       +..+.++|+++-.-     +.+   ..++++.+.|+++ |+++++..
T Consensus       142 -~~~p~~~D~v~~~~vLh~~~d~~~~~lL~~i~~~Lkpg-G~llI~d~  187 (256)
T d1qzza2         142 -KPLPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPG-GRLLVLDR  187 (256)
T ss_dssp             -SCCSCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             -ccccccchhhhccccccccCcHHHHHHHHHHHhhcCCc-ceeEEEEe
Confidence             11123689887532     212   3467899999998 99998864

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=81.91  E-value=0.67  Score=38.74  Aligned_cols=31  Identities=29%  Similarity=0.487  Sum_probs=27.1

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      .|+|+|+|.+|+.++.-+...|. +|+++++.
T Consensus         5 DvvIIGaGi~Gls~A~~La~~G~-~V~viE~~   35 (281)
T d2gf3a1           5 DVIVVGAGSMGMAAGYQLAKQGV-KTLLVDAF   35 (281)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCC
Confidence            38899999999998888888999 99999864

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=81.89  E-value=0.57  Score=38.12  Aligned_cols=31  Identities=32%  Similarity=0.491  Sum_probs=27.3

Q ss_pred             EEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022          204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVI  235 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~  235 (362)
                      .|+|+|+|+.|+.++..|...|. +|.+++..
T Consensus         5 DviVIG~GpaGl~aA~~aa~~G~-kV~viE~~   35 (235)
T d1h6va1           5 DLIIIGGGSGGLAAAKEAAKFDK-KVMVLDFV   35 (235)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGCC-CEEEECCC
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-eEEEEecc
Confidence            37888999999999999999999 88888843

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=81.44  E-value=0.55  Score=38.31  Aligned_cols=100  Identities=23%  Similarity=0.215  Sum_probs=57.8

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHc--CCCEEEEEcCCchHHHHHH----hcCCcEEEcCCCCCCccHHHHHHhh--
Q 018022          197 ANVEVGSTVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDM--  268 (362)
Q Consensus       197 ~~~~~g~~vlI~Gag~~G~~a~~la~~~--g~~~vi~~~~~~~~~~~~~----~~g~~~vv~~~~~~~~~~~~~i~~~--  268 (362)
                      .+.....+||=+|.+. |..++.+|+++  +. +++.++.+++..+.++    +.|...-+.-..   .+..+.+.++  
T Consensus        52 v~~~kpk~ILEiGt~~-G~Sti~la~al~~~g-~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~---Gd~~e~l~~l~~  126 (214)
T d2cl5a1          52 IREYSPSLVLELGAYC-GYSAVRMARLLQPGA-RLLTMEMNPDYAAITQQMLNFAGLQDKVTILN---GASQDLIPQLKK  126 (214)
T ss_dssp             HHHHCCSEEEEECCTT-SHHHHHHHTTCCTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE---SCHHHHGGGHHH
T ss_pred             HHhhCCCEEEEEccCc-hhHHHHHHHhCCCcc-EEEEEeccHHHHHHHHHHHHHcCCCccceeee---ccccccccchhh
Confidence            3344557899898643 56667777765  44 9999999998877764    456532111111   2334433332  


Q ss_pred             -cCC-CccEEEEcCCCHH-----HHHHHHHHhccCCceEEE
Q 018022          269 -TDG-GADYCFECVGLAS-----LVQEAYACCRKGWGKTIV  302 (362)
Q Consensus       269 -~~~-g~d~vid~~g~~~-----~~~~~~~~l~~~~G~iv~  302 (362)
                       ... .+|.++--.....     .+...++.++++ |.++.
T Consensus       127 ~~~~~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpG-GvIv~  166 (214)
T d2cl5a1         127 KYDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKG-TVLLA  166 (214)
T ss_dssp             HSCCCCEEEEEECSCGGGHHHHHHHHHHTTCEEEE-EEEEE
T ss_pred             cccccccceeeecccccccccHHHHHHHhCccCCC-cEEEE
Confidence             222 6998876533321     133455678996 75543

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.31  E-value=0.5  Score=38.35  Aligned_cols=34  Identities=15%  Similarity=0.183  Sum_probs=27.5

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCC------EEEEEcCCc
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGAT------RIIGVDVIS  236 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~------~vi~~~~~~  236 (362)
                      -+|+|+|+|+.|++|+..+..+|++      .|.+.++.+
T Consensus         3 ~~VaVIGaGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~   42 (239)
T d1lqta2           3 YYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLP   42 (239)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred             cEEEEECcCHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence            4799999999999999888777631      788887755

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=80.81  E-value=3  Score=32.48  Aligned_cols=92  Identities=20%  Similarity=0.258  Sum_probs=54.6

Q ss_pred             EEEEECCChHHHHHHHHHHHc----CCCEEEEEcC--CchHHHHHHhc-------CCcE---------------EEcCCC
Q 018022          204 TVVIFGLGSIGLAVAEGARLC----GATRIIGVDV--ISEKFEIGKRF-------GVTE---------------FVNSKN  255 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~----g~~~vi~~~~--~~~~~~~~~~~-------g~~~---------------vv~~~~  255 (362)
                      +|.|.|-|-+|+++.+.+...    .. .|+++..  +.+.+..+-++       ....               ++..++
T Consensus         3 kigINGfGRIGR~v~R~~~~~~~~~~~-~vvaINd~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~   81 (173)
T d1obfo1           3 RVAINGYGRIGRNILRAHYEGGKSHDI-EIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRN   81 (173)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTSCSSE-EEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSC
T ss_pred             EEEEECCcHHHHHHHHHHHhCCCCCCe-EEEEEcCCCChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEecCC
Confidence            578999999999999877643    24 5555542  22233333222       1110               111111


Q ss_pred             CCCccHHHHHHhhcC-C-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022          256 CGDKSVSQIIIDMTD-G-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD  306 (362)
Q Consensus       256 ~~~~~~~~~i~~~~~-~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~  306 (362)
                               +.++.. + ++|+||||+|.-.....+...|..+ -+-|++..+
T Consensus        82 ---------p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~G-akkViiSAP  124 (173)
T d1obfo1          82 ---------PAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGG-AKKVIISAP  124 (173)
T ss_dssp             ---------GGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHT-CSEEEESSC
T ss_pred             ---------HHHCcccccccceEEEecccccCHHHHHHHhccC-CcceEEecC
Confidence                     112222 2 8999999999765466777888886 776777653

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=80.68  E-value=5.5  Score=29.90  Aligned_cols=42  Identities=24%  Similarity=0.327  Sum_probs=28.3

Q ss_pred             CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHH-HHHHhcC
Q 018022          203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKF-EIGKRFG  246 (362)
Q Consensus       203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~-~~~~~~g  246 (362)
                      ++|-++|.|.+|...+.-+...|. .++ ..++.++. ++.++.+
T Consensus         1 ekIg~IGlG~MG~~ma~~L~~~g~-~~~-~~~~~~~~~~~~~~~~   43 (156)
T d2cvza2           1 EKVAFIGLGAMGYPMAGHLARRFP-TLV-WNRTFEKALRHQEEFG   43 (156)
T ss_dssp             CCEEEECCSTTHHHHHHHHHTTSC-EEE-ECSSTHHHHHHHHHHC
T ss_pred             CeEEEEeHHHHHHHHHHHHHhCCC-EEE-EeCCHHHHHHHHHHcC
Confidence            468899999999887777766676 655 45555544 4444443

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=80.50  E-value=1.6  Score=34.49  Aligned_cols=90  Identities=24%  Similarity=0.286  Sum_probs=59.1

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022          199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE  278 (362)
Q Consensus       199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid  278 (362)
                      +.++.+||=+|+|. |..+..+     . ++++++.+++-++.+++-+... +..+.   .++     ...++.||+|+.
T Consensus        34 ~~~~~~vLDiGcG~-G~~~~~~-----~-~~~giD~s~~~~~~a~~~~~~~-~~~d~---~~l-----~~~~~~fD~I~~   97 (208)
T d1vlma_          34 LLPEGRGVEIGVGT-GRFAVPL-----K-IKIGVEPSERMAEIARKRGVFV-LKGTA---ENL-----PLKDESFDFALM   97 (208)
T ss_dssp             HCCSSCEEEETCTT-STTHHHH-----T-CCEEEESCHHHHHHHHHTTCEE-EECBT---TBC-----CSCTTCEEEEEE
T ss_pred             hCCCCeEEEECCCC-ccccccc-----c-eEEEEeCChhhccccccccccc-ccccc---ccc-----cccccccccccc
Confidence            45677899999854 4444333     2 5689999999999998876543 33222   121     112237999987


Q ss_pred             cCC-----CH-HHHHHHHHHhccCCceEEEEcc
Q 018022          279 CVG-----LA-SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       279 ~~g-----~~-~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      .--     .+ ..++++.+.|+++ |++++.-.
T Consensus        98 ~~~l~h~~d~~~~l~~~~~~L~pg-G~l~i~~~  129 (208)
T d1vlma_          98 VTTICFVDDPERALKEAYRILKKG-GYLIVGIV  129 (208)
T ss_dssp             ESCGGGSSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             ccccccccccccchhhhhhcCCCC-ceEEEEec
Confidence            432     22 4578999999998 98887653

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.49  E-value=0.12  Score=40.72  Aligned_cols=133  Identities=17%  Similarity=0.162  Sum_probs=68.4

Q ss_pred             EEEEECCChHHHHHHHHHHHc-CCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022          204 TVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL  282 (362)
Q Consensus       204 ~vlI~Gag~~G~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~  282 (362)
                      +|+|+|+|.+|...+...+.. +...+.+++..+++     +......+..     .++.+.+.   ...+|+|+-|++.
T Consensus         9 kv~iIG~G~~g~~h~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-----~~~~e~l~---~~~iD~V~I~tp~   75 (172)
T d1lc0a1           9 GVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRR-----ELGSLDEVRQ-----ISLEDALR---SQEIDVAYICSES   75 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSS-----CCCEETTEEB-----CCHHHHHH---CSSEEEEEECSCG
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCCcEEEEEeccchH-----HHHHhhccCc-----CCHHHHHh---CCCcchhhhcccc
Confidence            689999999998877665533 22223333322221     1111000011     22333332   2379999999998


Q ss_pred             HHHHHHHHHHhccCCceEEEEccCCCCCccc-cCHHHHH-hcCcEEEEeeccCCCccccHHHHHHHHHcCCcc
Q 018022          283 ASLVQEAYACCRKGWGKTIVLGVDQPGSQLS-LSSFEVL-HSGKILMGSLFGGLKAKSDIPILLKRYMDKWSY  353 (362)
Q Consensus       283 ~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~-~~~~~~~-~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~  353 (362)
                      ....+.+..++..  |.-+++--+....... ..+..+. .++..+.-.+...+  ...+..+.+++.+|+|.
T Consensus        76 ~~H~~~~~~al~~--gk~V~~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~--~p~~~~~k~~i~~~~lG  144 (172)
T d1lc0a1          76 SSHEDYIRQFLQA--GKHVLVEYPMTLSFAAAQELWELAAQKGRVLHEEHVELL--KNIFLKDQDIFVQKLLD  144 (172)
T ss_dssp             GGHHHHHHHHHHT--TCEEEEESCSCSCHHHHHHHHHHHHHTTCCEEEECGGGG--TTHHHHHHHHHHHHHTT
T ss_pred             ccccccccccccc--chhhhcCCCccccHHHHHHHHHHHHHcCCeEEEecHHHh--hHHHHHHHHHHHcCCCC
Confidence            8778888888888  4667775421111001 1112222 23444432222222  35577777777766553

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=80.15  E-value=5  Score=35.25  Aligned_cols=93  Identities=16%  Similarity=0.151  Sum_probs=62.6

Q ss_pred             EEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc----CCcE----------------EEcCCCCCCccHHHHH
Q 018022          206 VIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVTE----------------FVNSKNCGDKSVSQII  265 (362)
Q Consensus       206 lI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~----g~~~----------------vv~~~~~~~~~~~~~i  265 (362)
                      ++.+-+..|.-.+++|+..|.+.|++.|.+++-.+.+++.    +...                .++.     .+.-..+
T Consensus        49 vLD~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~-----~Da~~~~  123 (375)
T d2dula1          49 VLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINH-----DDANRLM  123 (375)
T ss_dssp             EEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEE-----SCHHHHH
T ss_pred             EEEcCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeeh-----hhhhhhh
Confidence            3445567788888999988988999999999988888641    2211                1111     1222233


Q ss_pred             HhhcCCCcc-EEEEcCCCH-HHHHHHHHHhccCCceEEEEcc
Q 018022          266 IDMTDGGAD-YCFECVGLA-SLVQEAYACCRKGWGKTIVLGV  305 (362)
Q Consensus       266 ~~~~~~g~d-~vid~~g~~-~~~~~~~~~l~~~~G~iv~~G~  305 (362)
                      .+ .+..|| +.||..|++ ..+..++++++.+ |-+.+...
T Consensus       124 ~~-~~~~fDvIDiDPfGs~~pfldsAi~a~~~~-Gll~vTaT  163 (375)
T d2dula1         124 AE-RHRYFHFIDLDPFGSPMEFLDTALRSAKRR-GILGVTAT  163 (375)
T ss_dssp             HH-STTCEEEEEECCSSCCHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             Hh-hcCcCCcccCCCCCCcHHHHHHHHHHhccC-CEEEEEec
Confidence            22 223789 457888875 5688999999997 87776654

>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermotoga maritima [TaxId: 2336]

Probab=80.08  E-value=6.3  Score=33.01  Aligned_cols=46  Identities=22%  Similarity=0.213  Sum_probs=34.4

Q ss_pred             EEEECCChHHHHHHHHHHHcCCCEEEEEcC--CchHHHHHHhcCCcEE
Q 018022          205 VVIFGLGSIGLAVAEGARLCGATRIIGVDV--ISEKFEIGKRFGVTEF  250 (362)
Q Consensus       205 vlI~Gag~~G~~a~~la~~~g~~~vi~~~~--~~~~~~~~~~~g~~~v  250 (362)
                      |+...+|..|.+++..++..|...++.+..  ++.|.+.++.+|+..+
T Consensus        58 vv~~SsGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~GA~V~  105 (293)
T d1o58a_          58 IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELV  105 (293)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred             eEEecCcchhhHHHHhhhhccceeEeeccccccHHHeeccccCCcEEE
Confidence            444466999999999999999865555554  3467888888888644