Citrus Sinensis ID: 018051


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-
MARKTMFLFIFFCFLLILLPLSASAECKCDLTETIGGSGHKNKALKLKIVAILSILIAGAFGVSIPSFGKNISTFHPENNIFFIIKAFAAGVILATGFVHILPDAYESLTSPCLSPKPWQDFPFTGFVAMVSAILTMMVDAFATSFYQRLHFSKALPVNDDDKEMHAEHEGHVHVHTHATHGHAHGSAFASSDASGSGTSDLFRHRIVSQVLELGIVVHSVIIGISLGASGSVKTIKPLVAALTFHQFFEGMGLGGCISQAKFKSKAVAAMILFFSLTTPVGIGIGIGISKVYKENSPTALVIEGIFNSASAGILIYMALVDLLATDFMSPKLQTNFKLQLGANFSLLLGSGCMSLLAKWA
cccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHccccEEEEHHHccccHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcc
cccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHEHHHHHHHHHHHHHHHHHHHcHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcEEEEEEEEEEEccccccccccHHHHHHHHHHHHHHcccccHHHHHcccccHHHHHHHHHHHHHcHHHHHHHHEEccccccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHc
MARKTMFLFIFFCFLLILlplsasaeckcdltetiggsghknkALKLKIVAILSILIAGAfgvsipsfgknistfhpennIFFIIKAFAAGVILATGFVHilpdayesltspclspkpwqdfpftGFVAMVSAILTMMVDAFATSFYQRLhfskalpvndddkemhaeheghvhvhthathghahgsafassdasgsgtsdlFRHRIVSQVLELGIVVHSVIIGISlgasgsvktIKPLVAALTFHQffegmglggcisqaKFKSKAVAAMILFFSLTTPVGIGIGIGISKvykensptALVIEGIFNSASAGILIYMALVDLLAtdfmspklqtnfklqlganFSLLLGSGCMSLLAKWA
MARKTMFLFIFFCFLLILLPLSASAECKCDLTetiggsghknkALKLKIVAILSILIAGAFGVSIPSFGKNISTFHPENNIFFIIKAFAAGVILATGFVHILPDAYESLTSPCLSPKPWQDFPFTGFVAMVSAILTMMVDAFATSFYQRLHFSKALPVNDDDKEMHAEHEGHVHVHTHATHGHAHGSAFASSDASGSGTSDLFRHRIVSQVLELGIVVHSVIIGISLGASGSVKTIKPLVAALTFHQFFEGMGLGGCISQAKFKSKAVAAMILFFSLTTPVGIGIGIGISKVYKENSPTALVIEGIFNSASAGILIYMALVDLLATDFMSPKLQTNFKLQLGANFSLLLGSGCMSLLAKWA
MARKTMflfiffcfllillPLSASAECKCDLTETIGGSGHKNKALKLKIVAILSILIAGAFGVSIPSFGKNISTFHPENNIFFIIKAFAAGVILATGFVHILPDAYESLTSPCLSPKPWQDFPFTGFVAMVSAILTMMVDAFATSFYQRLHFSKALPVNDDDKEMhaeheghvhvhthathghahgsafassdasgsgtsdLFRHRIVSQVLElgivvhsviigislgASGSVKTIKPLVAALTFHQFFEGMGLGGCISQAKFKSKAVAAMILFFSLTTPVgigigigiSKVYKENSPTALVIEGIFNSASAGILIYMALVDLLATDFMSPKLQTNFKLQLGANFslllgsgcmsllAKWA
****TMFLFIFFCFLLILLPLSASAECKCDLTETIGGSGHKNKALKLKIVAILSILIAGAFGVSIPSFGKNISTFHPENNIFFIIKAFAAGVILATGFVHILPDAYESLTSPCLSPKPWQDFPFTGFVAMVSAILTMMVDAFATSFYQRLHFSKALP*******************************************DLFRHRIVSQVLELGIVVHSVIIGISLGASGSVKTIKPLVAALTFHQFFEGMGLGGCISQAKFKSKAVAAMILFFSLTTPVGIGIGIGISKVYKENSPTALVIEGIFNSASAGILIYMALVDLLATDFMSPKLQTNFKLQLGANFSLLLGSGCMSLLAK**
****TMFLFIFFCFLLILLPLSASA*****************KALKLKIVAILSILIAGAFGVSIPSFGKNISTFHPENNIFFIIKAFAAGVILATGFVHILPDAYESLTSPCLSPKPWQDFPFTGFVAMVSAILTMMVDAFATSFYQRLHFSKALPVNDDDKEMHAEHEGHVHVHTHATHG**********************HRIVSQVLELGIVVHSVIIGISLGASGSVKTIKPLVAALTFHQFFEGMGLGGCISQAKFKSKAVAAMILFFSLTTPVGIGIGIGISKVYKENSPTALVIEGIFNSASAGILIYMALVDLLATDFMSPKLQTNFKLQLGANFSLLLGSGCMSLLAKWA
MARKTMFLFIFFCFLLILLPLSASAECKCDLTETIGGSGHKNKALKLKIVAILSILIAGAFGVSIPSFGKNISTFHPENNIFFIIKAFAAGVILATGFVHILPDAYESLTSPCLSPKPWQDFPFTGFVAMVSAILTMMVDAFATSFYQRLHFSKALPVNDDDKEMHAEHEGHVHVHTH*********************SDLFRHRIVSQVLELGIVVHSVIIGISLGASGSVKTIKPLVAALTFHQFFEGMGLGGCISQAKFKSKAVAAMILFFSLTTPVGIGIGIGISKVYKENSPTALVIEGIFNSASAGILIYMALVDLLATDFMSPKLQTNFKLQLGANFSLLLGSGCMSLLAKWA
**RKTMFLFIFFCFLLILLPLSASAECKCDLTETIGGSGHKNKALKLKIVAILSILIAGAFGVSIPSFGKNISTFHPENNIFFIIKAFAAGVILATGFVHILPDAYESLTSPCLSPKPWQDFPFTGFVAMVSAILTMMVDAFATSFYQRLH***********************************************TSDLFRHRIVSQVLELGIVVHSVIIGISLGASGSVKTIKPLVAALTFHQFFEGMGLGGCISQAKFKSKAVAAMILFFSLTTPVGIGIGIGISKVYKENSPTALVIEGIFNSASAGILIYMALVDLLATDFMSPKLQTNFKLQLGANFSLLLGSGCMSLLAKWA
iiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooo
iiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHiii
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooo
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MARKTMFLFIFFCFLLILLPLSASAECKCDLTETIGGSGHKNKALKLKIVAILSILIAGAFGVSIPSFGKNISTFHPENNIFFIIKAFAAGVILATGFVHILPDAYESLTSPCLSPKPWQDFPFTGFVAMVSAILTMMVDAFATSFYQRLHFSKALPVNDDDKEMHAEHEGHVHVHTHATHGHAHGSAFASSDASGSGTSDLFRHRIVSQVLELGIVVHSVIIGISLGASGSVKTIKPLVAALTFHQFFEGMGLGGCISQAKFKSKAVAAMILFFSLTTPVGIGIGIGISKVYKENSPTALVIEGIFNSASAGILIYMALVDLLATDFMSPKLQTNFKLQLGANFSLLLGSGCMSLLAKWA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query361 2.2.26 [Sep-21-2011]
O81123355 Zinc transporter 1 OS=Ara yes no 0.922 0.938 0.564 1e-106
Q6L8G0353 Zinc transporter 5 OS=Ory yes no 0.955 0.977 0.532 1e-101
O23039360 Zinc transporter 5 OS=Ara no no 0.922 0.925 0.532 1e-95
Q7XLD4364 Zinc transporter 3 OS=Ory no no 0.933 0.925 0.550 2e-94
A3BI11390 Zinc transporter 8 OS=Ory no no 0.872 0.807 0.573 4e-94
Q9FIS2355 Probable zinc transporter no no 0.952 0.969 0.543 9e-94
Q6L8G1370 Fe(2+) transport protein no no 0.952 0.929 0.474 4e-93
Q75HB1374 Fe(2+) transport protein no no 0.875 0.844 0.504 8e-89
Q9SLG3339 Zinc transporter 3 OS=Ara no no 0.903 0.961 0.487 1e-88
Q8W245364 Probable zinc transporter no no 0.867 0.859 0.506 4e-88
>sp|O81123|ZIP1_ARATH Zinc transporter 1 OS=Arabidopsis thaliana GN=ZIP1 PE=2 SV=1 Back     alignment and function desciption
 Score =  384 bits (987), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/356 (56%), Positives = 250/356 (70%), Gaps = 23/356 (6%)

Query: 13  CFLLILLPLSASAECKCDLTETIGGSGHKNKALKLKIVAILSILIAGAFGVSIPSFGKNI 72
           C +LI+      A   C   +         KA KLK+ +I  +L+AG  GVS+P  GK I
Sbjct: 16  CVVLIICLHMCCASSDCTSHDDPVSQDEAEKATKLKLGSIALLLVAGGVGVSLPLIGKRI 75

Query: 73  STFHPENNIFFIIKAFAAGVILATGFVHILPDAYESLTSPCLSPKPWQDFPFTGFVAMVS 132
               PEN+IFF++KAFAAGVIL TGFVHILPDA+E L+SPCL       FPF GFVAM+S
Sbjct: 76  PALQPENDIFFMVKAFAAGVILCTGFVHILPDAFERLSSPCLEDTTAGKFPFAGFVAMLS 135

Query: 133 AILTMMVDAFATSFYQRLHFSKALPVNDDDKEMHA-----EHEGHVHVHTHATHGHAHGS 187
           A+ T+M+D FAT +Y+R HFS     N   K+++      EH GHVH+HTHA+HGH HGS
Sbjct: 136 AMGTLMIDTFATGYYKRQHFSN----NHGSKQVNVVVDEEEHAGHVHIHTHASHGHTHGS 191

Query: 188 AFASSDASGSGTSDLFRHRIVSQVLELGIVVHSVIIGISLGASGSVKTIKPLVAALTFHQ 247
                       ++L R RIVSQVLE+GIVVHSVIIGISLGAS S+ TIKPL+AAL+FHQ
Sbjct: 192 ------------TELIRRRIVSQVLEIGIVVHSVIIGISLGASQSIDTIKPLMAALSFHQ 239

Query: 248 FFEGMGLGGCISQAKFKSKAVAAMILFFSLTTPVGIGIGIGISK--VYKENSPTALVIEG 305
           FFEG+GLGGCIS A  KSK+   M  FFS+T P+GIGIG+G+S    Y++ S  A+++EG
Sbjct: 240 FFEGLGLGGCISLADMKSKSTVLMATFFSVTAPLGIGIGLGMSSGLGYRKESKEAIMVEG 299

Query: 306 IFNSASAGILIYMALVDLLATDFMSPKLQTNFKLQLGANFSLLLGSGCMSLLAKWA 361
           + N+ASAGILIYM+LVDLLATDFM+P+LQ+N  L L A  SL+LG+G MSLLA WA
Sbjct: 300 MLNAASAGILIYMSLVDLLATDFMNPRLQSNLWLHLAAYLSLVLGAGSMSLLAIWA 355




Mediates zinc uptake from the rhizosphere. May also transport copper and cadmium ions.
Arabidopsis thaliana (taxid: 3702)
>sp|Q6L8G0|ZIP5_ORYSJ Zinc transporter 5 OS=Oryza sativa subsp. japonica GN=ZIP5 PE=2 SV=1 Back     alignment and function description
>sp|O23039|ZIP5_ARATH Zinc transporter 5 OS=Arabidopsis thaliana GN=ZIP5 PE=2 SV=1 Back     alignment and function description
>sp|Q7XLD4|ZIP3_ORYSJ Zinc transporter 3 OS=Oryza sativa subsp. japonica GN=ZIP3 PE=1 SV=2 Back     alignment and function description
>sp|A3BI11|ZIP8_ORYSJ Zinc transporter 8 OS=Oryza sativa subsp. japonica GN=ZIP8 PE=2 SV=1 Back     alignment and function description
>sp|Q9FIS2|ZIP12_ARATH Probable zinc transporter 12 OS=Arabidopsis thaliana GN=ZIP12 PE=3 SV=1 Back     alignment and function description
>sp|Q6L8G1|IRT2_ORYSJ Fe(2+) transport protein 2 OS=Oryza sativa subsp. japonica GN=IRT2 PE=2 SV=1 Back     alignment and function description
>sp|Q75HB1|IRT1_ORYSJ Fe(2+) transport protein 1 OS=Oryza sativa subsp. japonica GN=IRT1 PE=2 SV=1 Back     alignment and function description
>sp|Q9SLG3|ZIP3_ARATH Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3 PE=2 SV=1 Back     alignment and function description
>sp|Q8W245|ZIP10_ARATH Probable zinc transporter 10 OS=Arabidopsis thaliana GN=ZIP10 PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query361
255582726359 zinc/iron transporter, putative [Ricinus 0.975 0.980 0.734 1e-147
388508230358 unknown [Medicago truncatula] 0.980 0.988 0.645 1e-131
224086353343 ZIP transporter [Populus trichocarpa] gi 0.905 0.953 0.699 1e-128
356557040359 PREDICTED: zinc transporter 1-like [Glyc 0.952 0.958 0.689 1e-127
359473092345 PREDICTED: zinc transporter 1-like [Viti 0.900 0.942 0.668 1e-126
356525738361 PREDICTED: zinc transporter 1-like [Glyc 0.958 0.958 0.683 1e-125
147860030397 hypothetical protein VITISV_029537 [Viti 0.900 0.818 0.668 1e-125
255573599355 zinc/iron transporter, putative [Ricinus 0.933 0.949 0.652 1e-125
297738016 522 unnamed protein product [Vitis vinifera] 0.858 0.593 0.688 1e-124
255648389359 unknown [Glycine max] 0.952 0.958 0.680 1e-124
>gi|255582726|ref|XP_002532140.1| zinc/iron transporter, putative [Ricinus communis] gi|223528176|gb|EEF30239.1| zinc/iron transporter, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  526 bits (1354), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 265/361 (73%), Positives = 304/361 (84%), Gaps = 9/361 (2%)

Query: 3   RKTMFLFIFFCFLLILLPLSASAECKCDLTET-IGGSGHKNKALKLKIVAILSILIAGAF 61
           RK+  LF   CFL  LLPL ASA+C CD  ET +  S  + K LK K+VA+ SILIA A 
Sbjct: 6   RKSFSLFFLVCFLH-LLPLLASADCTCDQEETAVTQSDDRTKTLKYKLVAVSSILIASAL 64

Query: 62  GVSIPSFGKNISTFHPENNIFFIIKAFAAGVILATGFVHILPDAYESLTSPCLSPKPWQD 121
           GV++P FGK I + +PENNIFF+IKAFAAGVILATGFVHILPDA++SLTSPCL  KPW  
Sbjct: 65  GVTLPIFGKKIPSLNPENNIFFLIKAFAAGVILATGFVHILPDAFDSLTSPCLKKKPWGQ 124

Query: 122 FPFTGFVAMVSAILTMMVDAFATSFYQRLHFSKALPVNDDDKEMHAEHEGHVHVHTHATH 181
           FPF+GFVAMVSAI+TMMVD FATS+++R HF+KALP++ D+ E+  +HEGHVHVHTHA+H
Sbjct: 125 FPFSGFVAMVSAIMTMMVDTFATSYFKRSHFNKALPLSGDE-ELQGKHEGHVHVHTHASH 183

Query: 182 GHAHGSA-FASSDASGSGTSDLFRHRIVSQVLELGIVVHSVIIGISLGASGSVKTIKPLV 240
           GHAHGSA F S D SG     +FRHRIVSQVLELGIVVHSVIIGISLGAS S+ TIKPLV
Sbjct: 184 GHAHGSAAFLSHDDSG-----IFRHRIVSQVLELGIVVHSVIIGISLGASQSIDTIKPLV 238

Query: 241 AALTFHQFFEGMGLGGCISQAKFKSKAVAAMILFFSLTTPVGIGIGIGISKVYKENSPTA 300
           AALTFHQFFEGMGLGGCISQAKFKS+AVAAM+LFFSLTTP+GI +GIGIS  Y  N+ TA
Sbjct: 239 AALTFHQFFEGMGLGGCISQAKFKSRAVAAMVLFFSLTTPIGIAVGIGISHSYNGNAQTA 298

Query: 301 LVIEGIFNSASAGILIYMALVDLLATDFMSPKLQTNFKLQLGANFSLLLGSGCMSLLAKW 360
           L++EG+FNSASAGILIYMALVDLLA DFM+PKLQ+N +LQLGAN SLLLG+ CMSLLAKW
Sbjct: 299 LIVEGVFNSASAGILIYMALVDLLAEDFMNPKLQSNLRLQLGANLSLLLGTACMSLLAKW 358

Query: 361 A 361
           A
Sbjct: 359 A 359




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388508230|gb|AFK42181.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|224086353|ref|XP_002307860.1| ZIP transporter [Populus trichocarpa] gi|222853836|gb|EEE91383.1| ZIP transporter [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356557040|ref|XP_003546826.1| PREDICTED: zinc transporter 1-like [Glycine max] Back     alignment and taxonomy information
>gi|359473092|ref|XP_002275820.2| PREDICTED: zinc transporter 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356525738|ref|XP_003531480.1| PREDICTED: zinc transporter 1-like [Glycine max] Back     alignment and taxonomy information
>gi|147860030|emb|CAN83129.1| hypothetical protein VITISV_029537 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255573599|ref|XP_002527722.1| zinc/iron transporter, putative [Ricinus communis] gi|223532863|gb|EEF34635.1| zinc/iron transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297738016|emb|CBI27217.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255648389|gb|ACU24645.1| unknown [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query361
UNIPROTKB|A3BI11390 ZIP8 "Zinc transporter 8" [Ory 0.437 0.405 0.563 9.7e-74
UNIPROTKB|Q6ZJ91396 ZIP4 "Zinc transporter 4" [Ory 0.437 0.398 0.537 1.8e-70
UNIPROTKB|Q7XLD4364 ZIP3 "Zinc transporter 3" [Ory 0.437 0.434 0.537 7.7e-70
TAIR|locus:2087705355 ZIP1 "zinc transporter 1 precu 0.443 0.450 0.5 1.6e-69
TAIR|locus:2207140360 ZIP5 "zinc transporter 5 precu 0.930 0.933 0.433 2.1e-68
UNIPROTKB|Q6L8G0353 ZIP5 "Zinc transporter 5" [Ory 0.908 0.929 0.442 6.5e-67
TAIR|locus:2174098355 ZIP12 "zinc transporter 12 pre 0.437 0.445 0.449 1.1e-66
TAIR|locus:2062576339 ZIP3 "zinc transporter 3 precu 0.443 0.471 0.456 1.8e-66
UNIPROTKB|Q75HB1374 IRT1 "Fe(2+) transport protein 0.443 0.427 0.487 6.1e-66
UNIPROTKB|Q6L8G1370 IRT2 "Fe(2+) transport protein 0.905 0.883 0.412 6.7e-65
UNIPROTKB|A3BI11 ZIP8 "Zinc transporter 8" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
 Score = 438 (159.2 bits), Expect = 9.7e-74, Sum P(2) = 9.7e-74
 Identities = 89/158 (56%), Positives = 105/158 (66%)

Query:   204 RHRIVSQVLEXXXXXXXXXXXXXXXASGSVKTIKPLVAALTFHQFFEGMGLGGCISQAKF 263
             RHR++SQVLE               AS + +TIKPLV AL+FHQ FEGMGLGGCI QAKF
Sbjct:   233 RHRVISQVLELGIVVHSVIIGISLGASQNPETIKPLVVALSFHQMFEGMGLGGCIVQAKF 292

Query:   264 KSKAVAAMILFFSLTTPVXXXXXXXXSKVYKENSPTALVIEGIFNSASAGILIYMALVDL 323
             K +++  M+LFF LTTPV        S VY E+SPTALV+EGI NS +AGILIYMALVDL
Sbjct:   293 KVRSIVTMVLFFCLTTPVGIAVGVGISSVYNESSPTALVVEGILNSVAAGILIYMALVDL 352

Query:   324 LATDFMSPKLQTNFKLQLGANFXXXXXXXXXXXXAKWA 361
             LA DFM+P++Q+  KLQLG N             AKWA
Sbjct:   353 LAEDFMNPRVQSKGKLQLGINLAMLAGAGLMSMLAKWA 390


GO:0005886 "plasma membrane" evidence=IDA
GO:0006829 "zinc ion transport" evidence=IMP
UNIPROTKB|Q6ZJ91 ZIP4 "Zinc transporter 4" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q7XLD4 ZIP3 "Zinc transporter 3" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2087705 ZIP1 "zinc transporter 1 precursor" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207140 ZIP5 "zinc transporter 5 precursor" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q6L8G0 ZIP5 "Zinc transporter 5" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2174098 ZIP12 "zinc transporter 12 precursor" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2062576 ZIP3 "zinc transporter 3 precursor" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q75HB1 IRT1 "Fe(2+) transport protein 1" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q6L8G1 IRT2 "Fe(2+) transport protein 2" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6L8G0ZIP5_ORYSJNo assigned EC number0.53290.95560.9773yesno
O81123ZIP1_ARATHNo assigned EC number0.56460.92240.9380yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query361
TIGR00820324 TIGR00820, zip, ZIP zinc/iron transport family 1e-147
PLN02159337 PLN02159, PLN02159, Fe(2+) transport protein 1e-110
pfam02535314 pfam02535, Zip, ZIP Zinc transporter 1e-68
>gnl|CDD|233141 TIGR00820, zip, ZIP zinc/iron transport family Back     alignment and domain information
 Score =  418 bits (1076), Expect = e-147
 Identities = 187/333 (56%), Positives = 234/333 (70%), Gaps = 9/333 (2%)

Query: 29  CDLTETIGGSGHKNKALKLKIVAILSILIAGAFGVSIPSFGKNISTFHPENNIFFIIKAF 88
           C   +    + +K  ALKLKIVAI SIL+A   GV  P  GKN+ +  PE N FF+ KAF
Sbjct: 1   CSHEDDNSCN-NKEGALKLKIVAIFSILLASVIGVMFPLIGKNVPSLRPEGNFFFVAKAF 59

Query: 89  AAGVILATGFVHILPDAYESLTSPCLSPKPWQDFPFTGFVAMVSAILTMMVDAFATSFYQ 148
           AAGVILATGF+H+LP+A+E L+SPCL   PW  FPF GF+AM+SAILT++VD FATS+Y+
Sbjct: 60  AAGVILATGFMHVLPEAFEMLSSPCLESTPWGKFPFAGFIAMISAILTLLVDLFATSYYE 119

Query: 149 RLHFSKALPVNDDDKEMHAEHEGHVHVHTHATHGHAHGSAFASSDASGSGTSDLFRHRIV 208
           R H                E +        A         +     + S    L R R+V
Sbjct: 120 RKHGKGDHG--------SKEIKVGDGEEGTAGGTKHGHEYYEDHVHTNSEVVQLLRQRVV 171

Query: 209 SQVLELGIVVHSVIIGISLGASGSVKTIKPLVAALTFHQFFEGMGLGGCISQAKFKSKAV 268
           +QVLELGI+VHSV+IG+SLGAS S  TIKPL+AAL+FHQFFEG+GLGGCISQA+FK K+V
Sbjct: 172 AQVLELGIIVHSVVIGLSLGASQSPDTIKPLIAALSFHQFFEGLGLGGCISQAEFKCKSV 231

Query: 269 AAMILFFSLTTPVGIGIGIGISKVYKENSPTALVIEGIFNSASAGILIYMALVDLLATDF 328
             M  FF++TTP+GI IG+GIS  Y ++SPTAL++EG+ N+ASAGILIYMALVDLLA DF
Sbjct: 232 TIMCTFFAVTTPLGIAIGMGISSSYDDSSPTALIVEGVLNAASAGILIYMALVDLLAADF 291

Query: 329 MSPKLQTNFKLQLGANFSLLLGSGCMSLLAKWA 361
           M PK+Q+N +LQ+ A  +LLLG+G MSLLAKWA
Sbjct: 292 MHPKMQSNLRLQIMAYIALLLGAGLMSLLAKWA 324


The Zinc (Zn2+)-Iron (Fe2+) Permease (ZIP) Family (TC 2.A.5)Members of the ZIP family consist of proteins with eight putative transmembrane spanners. They are derived from animals, plants and yeast. Theycomprise a diverse family, with several paralogues in any one organism (e.g., at least five in Caenorabditis elegans, at least five in Arabidopsis thaliana and two inSaccharomyces cervisiae. The two S. cerevisiae proteins, Zrt1 and Zrt2, both probably transport Zn2+ with high specificity, but Zrt1 transports Zn2+ with ten-fold higher affinitythan Zrt2. Some members of the ZIP family have been shown to transport Zn2+ while others transport Fe2+, and at least one transports a range of metal ions. The energy source fortransport has not been characterized, but these systems probably function as secondary carriers [Transport and binding proteins, Cations and iron carrying compounds]. Length = 324

>gnl|CDD|177818 PLN02159, PLN02159, Fe(2+) transport protein Back     alignment and domain information
>gnl|CDD|217089 pfam02535, Zip, ZIP Zinc transporter Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 361
KOG1558327 consensus Fe2+/Zn2+ regulated transporter [Inorgan 100.0
TIGR00820324 zip ZIP zinc/iron transport family. transport has 100.0
PLN02159337 Fe(2+) transport protein 100.0
PF02535317 Zip: ZIP Zinc transporter; InterPro: IPR003689 The 100.0
PRK04201265 zinc transporter ZupT; Provisional 100.0
COG0428266 Predicted divalent heavy-metal cations transporter 99.95
KOG2693453 consensus Putative zinc transporter [Inorganic ion 99.94
KOG2694361 consensus Putative zinc transporter [Inorganic ion 99.91
KOG3907303 consensus ZIP-like zinc transporter proteins [Intr 99.76
KOG2474406 consensus Zinc transporter and related ZIP domain- 98.97
PRK04201 265 zinc transporter ZupT; Provisional 98.19
PF02535317 Zip: ZIP Zinc transporter; InterPro: IPR003689 The 95.04
COG0428 266 Predicted divalent heavy-metal cations transporter 93.91
PRK11469188 hypothetical protein; Provisional 86.78
KOG1558327 consensus Fe2+/Zn2+ regulated transporter [Inorgan 86.14
TIGR00820324 zip ZIP zinc/iron transport family. transport has 85.58
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
Probab=100.00  E-value=5.4e-62  Score=463.37  Aligned_cols=320  Identities=46%  Similarity=0.732  Sum_probs=263.5

Q ss_pred             CCcCCccchhhHHHHHHHHHHHHHHHHhhHhhhcccccCCCCCchHHHHHHHhhhhhHHhhhHHhccHhhHHhccCCCCC
Q 018051           36 GGSGHKNKALKLKIVAILSILIAGAFGVSIPSFGKNISTFHPENNIFFIIKAFAAGVILATGFVHILPDAYESLTSPCLS  115 (361)
Q Consensus        36 ~~~~~~~~~~~~ki~~i~~i~~~sllg~~lPl~~~~~~~~~~~~~~l~~l~~fa~GVlLa~aflhLLPea~e~~~~~~~~  115 (361)
                      ++|.|++..+.+|+++++++++.|++|+++|++.++.+..+.+++.+++.+|||+||+|||+|+|+|||++|.+++.|..
T Consensus         7 ~~~~~~~~~~~lKi~ai~vil~~s~i~~~~Pl~~~~~~~~~~~~~~~~~~kcFa~GViLaT~FlH~Lpd~~E~l~~~~~~   86 (327)
T KOG1558|consen    7 ASCADKMGALLLKIVAIFVILLLSLIGGLLPLFVRRTSALQPESRFLSLVKCFAGGVILATGFLHLLPDAFEALESLCLA   86 (327)
T ss_pred             ccccchhhhhhHHHHHHHHHHHHHHHHhcchHhhccccccCCccchHHHHHHHhccHHHHHHHHHhChhHHHHhhccccc
Confidence            67999999999999999999999999999999988866667888999999999999999999999999999999999988


Q ss_pred             CCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCccccccc-CCcccccCCCCCCCCCCCCCCCCCC
Q 018051          116 PKPWQDFPFTGFVAMVSAILTMMVDAFATSFYQRLHFSKALPVNDDDKEMHAEH-EGHVHVHTHATHGHAHGSAFASSDA  194 (361)
Q Consensus       116 ~~~~~~~p~~~~~~~~Gf~l~~llE~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~~~~~~~~~~~~~~h~~~~~~~~~  194 (361)
                      .+.|.+||++++++++||++++++|.+...++++++.++.+..... .|+++++ ..+.+.|+..+++|+|.+..+..++
T Consensus        87 ~~~~~~fp~~~~i~~~gf~l~l~id~~~~~~~~h~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (327)
T KOG1558|consen   87 DNPWGKFPFAEFIAMLGFFLTLLIDEITTSYVGHGHSHKKRNEVAV-SEEGEDLRAVGNGEHGAIHVGHSHGHSEPSTPG  165 (327)
T ss_pred             CCCCcCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccCC-cCcCcccccccccCCccccCCCCCCCCCCCCcc
Confidence            8899999999999999999999999999988754433211111110 1111110 0000111000012222222111100


Q ss_pred             CCCCCccchhhhHHHHHHHHHHHHHhHHHHhhhhccCCcchhHHHHHHHHHHHHHHHhhhhhhhhhccCchhHHHHHHHH
Q 018051          195 SGSGTSDLFRHRIVSQVLELGIVVHSVIIGISLGASGSVKTIKPLVAALTFHQFFEGMGLGGCISQAKFKSKAVAAMILF  274 (361)
Q Consensus       195 ~~~~~~~~~r~~~~~~~l~lglslHs~~eGlalGv~~~~~~~~~l~~AI~~Hk~~eg~alg~~L~~~~~s~~~~~~~~~i  274 (361)
                      ..+   +...+++.++++++|+++||++||+|+|++.+.++++.++.|+.+||.+|||++|.++.+++.+++.++.++++
T Consensus       166 ~~~---~~~~~~~~~~iL~lgi~~HSvfeGlalGv~~~~~ti~~L~~al~fHk~fegf~lG~~l~~a~~~~~~~~~~~~~  242 (327)
T KOG1558|consen  166 VVD---DGQASRLRSLILELGLSFHSVFEGLALGVQDSVSTIWTLFLALSFHKLFEGFGLGGCLLQAGFTFKSAVLMALF  242 (327)
T ss_pred             ccc---hhhhhhHHHHHHHHHHHHHHHHHhhhccccCCHHHHHHHHHHHHHHHHHHHhcccHHHhhcccchHHHHHHHHH
Confidence            000   11114556899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCccccchHHHHHHHHHHHHHHHHH
Q 018051          275 FSLTTPVGIGIGIGISKVYKENSPTALVIEGIFNSASAGILIYMALVDLLATDFMSPKLQTNFKLQLGANFSLLLGSGCM  354 (361)
Q Consensus       275 fsl~tPlG~~IG~~i~~~~~~~s~~~~~~~gil~alaaGtflYIa~~Ellp~e~~~~~~~~~~~~~~~~~~~~~lG~~lM  354 (361)
                      ||++||+|+++|+.+.+.+ ++++++++++++++|+|+|||+||+++|+||+|+.++++|+ .|.++.+++++++|+++|
T Consensus       243 fslttPiGi~iG~~i~~~~-~~s~~~~i~~gvL~alAaGtliY~~lvElla~ef~~~~~~~-~~~~i~~~i~~~~G~alm  320 (327)
T KOG1558|consen  243 FSLTTPIGIALGIGISSSY-ENSPGALITSGVLEALAAGTLIYVALVELLAAEFANPKMQS-LKLQILKLIALLLGFALM  320 (327)
T ss_pred             HHHHhHHHHHHHHHhcccc-cCCchhHHHHHHHHHHhhhHhHHHHHHHHhHHHhcCchhhh-HHHHHHHHHHHHHhHHHH
Confidence            9999999999999999987 78899999999999999999999999999999999998877 778899999999999999


Q ss_pred             HHHHhhC
Q 018051          355 SLLAKWA  361 (361)
Q Consensus       355 a~l~~w~  361 (361)
                      +++++|+
T Consensus       321 s~l~~wa  327 (327)
T KOG1558|consen  321 SLLAIWA  327 (327)
T ss_pred             HHHHHhC
Confidence            9999997



>TIGR00820 zip ZIP zinc/iron transport family Back     alignment and domain information
>PLN02159 Fe(2+) transport protein Back     alignment and domain information
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [] Back     alignment and domain information
>PRK04201 zinc transporter ZupT; Provisional Back     alignment and domain information
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2694 consensus Putative zinc transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG3907 consensus ZIP-like zinc transporter proteins [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2474 consensus Zinc transporter and related ZIP domain-containing proteins [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK04201 zinc transporter ZupT; Provisional Back     alignment and domain information
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [] Back     alignment and domain information
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11469 hypothetical protein; Provisional Back     alignment and domain information
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00820 zip ZIP zinc/iron transport family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00