Citrus Sinensis ID: 018077

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-
MAPTTVLLSDFSDVTDFVVNQGNGVKGLSEMGLKALPKQYIQPLEERFSEKKIVPHESIPIIDMSKWDDPEVAKSICDAAEMWGFFQVVNHRVPLQVLDRVKAATHRFFGLSAAEKNKYSKELSPSNNVRFGTSFNTQAEKALEWKDYLSLFYVSDDEASALWPPACKDEVLEYTKSSEVLIKQLLKVLMKGLKVEGTDEAKEALLMGSVRTNLNYYPICPNPELTVGVGRHSDVSTLTILLQDDIGGLYVRGNDGESWIHVPPISGSLVINIGDALQIMSNGKYRSVEHCVIANGSSNRISVPIFINPRPQDTIGPFPEVLASGEKPVYKQVLYKDYVKHFFRKAHDGKKTVDFAKLSIF
ccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccEEEccccccHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHccccccccEEEEccccccccccccccEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccEEEEEEcccccccccccccccccccccccEEEEccccccEEEEEcccccEEEcccccccEEEEEccEEEEEEccccccccccEEEcccccEEEEEEEEcccccccEEccccccccccccccccccHHHHHHHHHHccccccccccccccccc
ccccccccccHHHHHHHHHcccHHHHHHHHcccccccHHcEcccHcccccccccccccccEEEccccccHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHcccccccEEEEEccccccccccccHHHHEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccEEEEEEEEcccccccccccEEEEcccccEEEEEEcccccEEEEEccccEEEEEcccccEEEEEEccHHHEHccccEEEEEEEEEEEccccEEEEEEEEcccccccccccHHHcccccccccccccHHHHHHHHHHcccccccHHHHEEcccc
mapttvllsdfsdVTDFVVNqgngvkglsemglkalpkqyiqpleerfsekkivphesipiidmskwddpeVAKSICDAAEMWGFFQVVNHRVPLQVLDRVKAATHRFFGLSaaeknkyskelspsnnvrfgtsfnTQAEKALEWKDYLSLFyvsddeasalwppackdevlEYTKSSEVLIKQLLKVLMKGLKVEGTDEAKEALLMGSVrtnlnyypicpnpeltvgvgrhsdvsTLTILLQddigglyvrgndgeswihvppisgslviNIGDALqimsngkyrsVEHCVIangssnrisvpifinprpqdtigpfpevlasgekpvykQVLYKDYVKHFFRkahdgkktvDFAKLSIF
mapttvllsdfsdvtDFVVNQGNGVKGLSEMGLKALPKQYIQPLEErfsekkivphesipiidmskwdDPEVAKSICDAAEMWGFFQVVNHRVPLQVLDRVKAATHRFFglsaaeknkyskelspsnnvrfGTSFNTQAEKALEWKDYLSLFYVSDDEASALWPPACKDEVLEYTKSSEVLIKQLLKVLMKGLKVEGTDEAKEALLMGSVRTNLNYYPICPNPELTVGVGRHSDVSTLTILLQDDIGGLYVRGNDGESWIHVPPISGSLVINIGDALQIMSNGKYRSVEHCVIANGSSNRISVPIFINPRPQDTIGPFPEVLASGEKPVYKQVLYKDYVKHFFrkahdgkktvdfaklsif
MAPTTVLLSDFSDVTDFVVNQGNGVKGLSEMGLKALPKQYIQPLEERFSEKKIVPHESIPIIDMSKWDDPEVAKSICDAAEMWGFFQVVNHRVPLQVLDRVKAATHRFFGLSAAEKNKYSKELSPSNNVRFGTSFNTQAEKALEWKDYLSLFYVSDDEASALWPPACKDEVLEYTKSSEVLIKQLLKVLMKGLKVEGTDEAKEALLMGSVRTNLNYYPICPNPELTVGVGRHSDVSTLTILLQDDIGGLYVRGNDGESWIHVPPISGSLVINIGDALQIMSNGKYRSVEHCVIANGSSNRISVPIFINPRPQDTIGPFPEVLASGEKPVYKQVLYKDYVKHFFRKAHDGKKTVDFAKLSIF
*****VLLSDFSDVTDFVVNQGNGVKGLSEMGLKALPKQYIQPLEERFSEKKIVPHESIPIIDMSKWDDPEVAKSICDAAEMWGFFQVVNHRVPLQVLDRVKAATHRFFGLSA****************RFGTSFNTQAEKALEWKDYLSLFYVSDDEASALWPPACKDEVLEYTKSSEVLIKQLLKVLMKGLKVEGTDEAKEALLMGSVRTNLNYYPICPNPELTVGVGRHSDVSTLTILLQDDIGGLYVRGNDGESWIHVPPISGSLVINIGDALQIMSNGKYRSVEHCVIANGSSNRISVPIFINPRPQDTIGPFPEVLASGEKPVYKQVLYKDYVKHFFRKAHDGKKTVDF******
***************DFVVNQGNGVKGLSEMGLKALPKQYIQP*************ESIPIIDMSKWDDPEVAKSICDAAEMWGFFQVVNHRVPLQVLDRVKAATHRFFGLSAAEKNKYSKELSPSNNVRFGTSFNTQAEKALEWKDYLSLFYVSDDEASALWPPACKDEVLEYTKSSEVLIKQLLKVLMKGLKVEGTDEAKEALLMGSVRTNLNYYPICPNPELTVGVGRHSDVSTLTILLQDDIGGLYVRGNDGESWIHVPPISGSLVINIGDALQIMSNGKYRSVEHCVIANGSSNRISVPIFINPRPQDTIGPFPEVLASGEKPVYKQVLYKDYVKHFFRKAHDGKKTVDFAKLSIF
MAPTTVLLSDFSDVTDFVVNQGNGVKGLSEMGLKALPKQYIQPLEERFSEKKIVPHESIPIIDMSKWDDPEVAKSICDAAEMWGFFQVVNHRVPLQVLDRVKAATHRFFGLSAAEKNKYSKELSPSNNVRFGTSFNTQAEKALEWKDYLSLFYVSDDEASALWPPACKDEVLEYTKSSEVLIKQLLKVLMKGLKVEGTDEAKEALLMGSVRTNLNYYPICPNPELTVGVGRHSDVSTLTILLQDDIGGLYVRGNDGESWIHVPPISGSLVINIGDALQIMSNGKYRSVEHCVIANGSSNRISVPIFINPRPQDTIGPFPEVLASGEKPVYKQVLYKDYVKHFFRKAHDGKKTVDFAKLSIF
***********SDVTDFVVNQGNGVKGLSEMGLKALPKQYIQPLEERFSEKKIVPHESIPIIDMSKWDDPEVAKSICDAAEMWGFFQVVNHRVPLQVLDRVKAATHRFFGLSAAEKNKYSKELSPSNNVRFGTSFNTQAEKALEWKDYLSLFYVSDDEASALWPPACKDEVLEYTKSSEVLIKQLLKVLMKGLKVEGTDEAKEALLMGSVRTNLNYYPICPNPELTVGVGRHSDVSTLTILLQDDIGGLYVRGNDGESWIHVPPISGSLVINIGDALQIMSNGKYRSVEHCVIANGSSNRISVPIFINPRPQDTIGPFPEVLASGEKPVYKQVLYKDYVKHFFRKAHDGKKTVDFAKLSIF
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAPTTVLLSDFSDVTDFVVNQGNGVKGLSEMGLKALPKQYIQPLEERFSEKKIVPHESIPIIDMSKWDDPEVAKSICDAAEMWGFFQVVNHRVPLQVLDRVKAATHRFFGLSAAEKNKYSKELSPSNNVRFGTSFNTQAEKALEWKDYLSLFYVSDDEASALWPPACKDEVLEYTKSSEVLIKQLLKVLMKGLKVEGTDEAKEALLMGSVRTNLNYYPICPNPELTVGVGRHSDVSTLTILLQDDIGGLYVRGNDGESWIHVPPISGSLVINIGDALQIMSNGKYRSVEHCVIANGSSNRISVPIFINPRPQDTIGPFPEVLASGEKPVYKQVLYKDYVKHFFRKAHDGKKTVDFAKLSIF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query361 2.2.26 [Sep-21-2011]
Q9LHN8361 Feruloyl CoA ortho-hydrox yes no 0.991 0.991 0.656 1e-140
Q9C899361 Feruloyl CoA ortho-hydrox no no 0.955 0.955 0.662 1e-138
Q9LTH8364 1-aminocyclopropane-1-car no no 0.903 0.895 0.348 2e-49
Q84MB3365 1-aminocyclopropane-1-car no no 0.908 0.898 0.346 2e-49
Q9LSW6362 1-aminocyclopropane-1-car no no 0.922 0.919 0.353 7e-48
P10967363 1-aminocyclopropane-1-car N/A no 0.894 0.889 0.339 1e-47
Q9LTH7366 1-aminocyclopropane-1-car no no 0.878 0.866 0.352 3e-47
Q43383398 1-aminocyclopropane-1-car no no 0.867 0.786 0.348 8e-47
P93824360 1-aminocyclopropane-1-car no no 0.919 0.922 0.347 9e-46
Q9M2C4370 1-aminocyclopropane-1-car no no 0.889 0.867 0.346 1e-45
>sp|Q9LHN8|F6H1_ARATH Feruloyl CoA ortho-hydroxylase 1 OS=Arabidopsis thaliana GN=F6'H1 PE=1 SV=1 Back     alignment and function desciption
 Score =  499 bits (1285), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 237/361 (65%), Positives = 292/361 (80%), Gaps = 3/361 (0%)

Query: 1   MAPT--TVLLSDFSDVTDFVVNQGNGVKGLSEMGLKALPKQYIQPLEERFSEKKI-VPHE 57
           MAPT  T   S+ ++VTDFVV +GNGVKGLSE G+KALP+QYIQPLEER   K +    E
Sbjct: 1   MAPTLLTTQFSNPAEVTDFVVYKGNGVKGLSETGIKALPEQYIQPLEERLINKFVNETDE 60

Query: 58  SIPIIDMSKWDDPEVAKSICDAAEMWGFFQVVNHRVPLQVLDRVKAATHRFFGLSAAEKN 117
           +IP+IDMS  D+  VA+++CDAAE WGFFQV+NH VPL+VLD VKAATH+FF L   EK 
Sbjct: 61  AIPVIDMSNPDEDRVAEAVCDAAEKWGFFQVINHGVPLEVLDDVKAATHKFFNLPVEEKR 120

Query: 118 KYSKELSPSNNVRFGTSFNTQAEKALEWKDYLSLFYVSDDEASALWPPACKDEVLEYTKS 177
           K++KE S S  VRFGTSF+  AE+ALEWKDYLSLF+VS+ EA   WP  C++E LEY   
Sbjct: 121 KFTKENSLSTTVRFGTSFSPLAEQALEWKDYLSLFFVSEAEAEQFWPDICRNETLEYINK 180

Query: 178 SEVLIKQLLKVLMKGLKVEGTDEAKEALLMGSVRTNLNYYPICPNPELTVGVGRHSDVST 237
           S+ ++++LL+ L K L V+  DE KE+L MGS+R NLNYYPICPNP+LTVGVGRHSDVS+
Sbjct: 181 SKKMVRRLLEYLGKNLNVKELDETKESLFMGSIRVNLNYYPICPNPDLTVGVGRHSDVSS 240

Query: 238 LTILLQDDIGGLYVRGNDGESWIHVPPISGSLVINIGDALQIMSNGKYRSVEHCVIANGS 297
           LTILLQD IGGL+VR     +W+HVPP++GS VINIGDA+QIMSNG Y+SVEH V+ANG 
Sbjct: 241 LTILLQDQIGGLHVRSLASGNWVHVPPVAGSFVINIGDAMQIMSNGLYKSVEHRVLANGY 300

Query: 298 SNRISVPIFINPRPQDTIGPFPEVLASGEKPVYKQVLYKDYVKHFFRKAHDGKKTVDFAK 357
           +NRISVPIF+NP+P+  IGP PEV+A+GE+P+Y+ VLY DYVK+FFRKAHDGKKTVD+AK
Sbjct: 301 NNRISVPIFVNPKPESVIGPLPEVIANGEEPIYRDVLYSDYVKYFFRKAHDGKKTVDYAK 360

Query: 358 L 358
           +
Sbjct: 361 I 361
2-oxoglutarate (OG)- and Fe(II)-dependent dioxygenase (2OGD)involved in scopoletin biosynthesis. Converts feruloyl CoA into 6'-hydroxyferuloyl CoA but has no activity with ferulic acid, feruloylquinic acid, caffeic acid, caffeoyl CoA, p-coumaric acid, cinnamic acid, cinnamoyl CoA or benzoyl CoA.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: -
>sp|Q9C899|F6H2_ARATH Feruloyl CoA ortho-hydroxylase 2 OS=Arabidopsis thaliana GN=F6'H2 PE=1 SV=1 Back     alignment and function description
>sp|Q9LTH8|ACH11_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 11 OS=Arabidopsis thaliana GN=At5g59530 PE=2 SV=1 Back     alignment and function description
>sp|Q84MB3|ACCH1_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1 Back     alignment and function description
>sp|Q9LSW6|ACH10_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 10 OS=Arabidopsis thaliana GN=At5g43450 PE=2 SV=1 Back     alignment and function description
>sp|P10967|ACCH3_SOLLC 1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1 Back     alignment and function description
>sp|Q9LTH7|ACH12_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 12 OS=Arabidopsis thaliana GN=At5g59540 PE=2 SV=1 Back     alignment and function description
>sp|Q43383|ACCH5_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 5 OS=Arabidopsis thaliana GN=2A6 PE=2 SV=2 Back     alignment and function description
>sp|P93824|ACCH6_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 6 OS=Arabidopsis thaliana GN=At1g04350 PE=2 SV=1 Back     alignment and function description
>sp|Q9M2C4|ACCH8_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 8 OS=Arabidopsis thaliana GN=At3g61400 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query361
224057036358 predicted protein [Populus trichocarpa] 0.988 0.997 0.768 1e-163
224052970361 2-oxoglutarate-dependent dioxygenase [Po 0.994 0.994 0.745 1e-160
354696022363 citrus dioxygenase [Citrus limetta] 1.0 0.994 0.710 1e-154
225435724358 PREDICTED: 1-aminocyclopropane-1-carboxy 0.988 0.997 0.732 1e-152
225435722358 PREDICTED: 1-aminocyclopropane-1-carboxy 0.988 0.997 0.724 1e-150
358635024358 oxidoreductase [Ipomoea batatas] 0.983 0.991 0.696 1e-149
255569730362 leucoanthocyanidin dioxygenase, putative 0.983 0.980 0.698 1e-148
358635022358 oxidoreductase [Ipomoea batatas] 0.983 0.991 0.693 1e-148
255569732363 leucoanthocyanidin dioxygenase, putative 0.983 0.977 0.693 1e-148
358635020358 oxidoreductase [Ipomoea batatas] 0.983 0.991 0.693 1e-148
>gi|224057036|ref|XP_002299115.1| predicted protein [Populus trichocarpa] gi|222846373|gb|EEE83920.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 276/359 (76%), Positives = 313/359 (87%), Gaps = 2/359 (0%)

Query: 1   MAPT-TVLLSDFSDVTDFVVNQGNGVKGLSEMGLKALPKQYIQPLEERFSEKKIVPHESI 59
           MAPT  V  +D SD+TDF +N+GNGVKGLSEMGL++LPKQYIQPLEER    KI+ HESI
Sbjct: 1   MAPTLAVSFNDSSDITDFFLNKGNGVKGLSEMGLESLPKQYIQPLEERMCGTKIMSHESI 60

Query: 60  PIIDMSKWDDPEVAKSICDAAEMWGFFQVVNHRVPLQVLDRVKAATHRFFGLSAAEKNKY 119
           PIIDMSKWDDP+VA++IC+AAE WGFFQ++NH VP++VL+ VK ATH+FF L A EK KY
Sbjct: 61  PIIDMSKWDDPKVAEAICEAAEKWGFFQIINHGVPIEVLENVKEATHQFFRLPAEEKRKY 120

Query: 120 SKELSPSNNVRFGTSFNTQAEKALEWKDYLSLFYVSDDEASALWPPACKDEVLEYTKSSE 179
            KE SPSNNVRFGTSF+ +AEKALEWKDYLSLFYVS+DEASALWP  CKD+VLEY K SE
Sbjct: 121 LKEFSPSNNVRFGTSFSPEAEKALEWKDYLSLFYVSEDEASALWPAVCKDQVLEYMKRSE 180

Query: 180 VLIKQLLKVLMKGLKVEGTDEAKEALLMGSVRTNLNYYPICPNPELTVGVGRHSDVSTLT 239
            +I++LL VLMK L V   DE KE+LLMGS RTNLNYYPICPNPELTVGVGRHSDVSTLT
Sbjct: 181 TVIRKLLDVLMKNLNVTEIDETKESLLMGSKRTNLNYYPICPNPELTVGVGRHSDVSTLT 240

Query: 240 ILLQDDIGGLYVRGNDGESWIHVPPISGSLVINIGDALQIMSNGKYRSVEHCVIANGSSN 299
            LLQDDIGGLYVRGN+ +SWIHVPP+SGS+VIN+GDALQIMSNG+Y+S+EH VIANGS+N
Sbjct: 241 FLLQDDIGGLYVRGNN-DSWIHVPPVSGSIVINVGDALQIMSNGRYKSIEHRVIANGSNN 299

Query: 300 RISVPIFINPRPQDTIGPFPEVLASGEKPVYKQVLYKDYVKHFFRKAHDGKKTVDFAKL 358
           RISVPIFINP P D I PFPEVLA GEK VYK+VLY DYVKHFFRKAHDGKKT+D AK+
Sbjct: 300 RISVPIFINPMPSDKISPFPEVLAGGEKAVYKEVLYSDYVKHFFRKAHDGKKTIDLAKI 358

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224052970|ref|XP_002297642.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] gi|222844900|gb|EEE82447.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|354696022|gb|AER36089.1| citrus dioxygenase [Citrus limetta] Back     alignment and taxonomy information
>gi|225435724|ref|XP_002285698.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 11 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225435722|ref|XP_002285699.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 11 [Vitis vinifera] Back     alignment and taxonomy information
>gi|358635024|dbj|BAL22345.1| oxidoreductase [Ipomoea batatas] Back     alignment and taxonomy information
>gi|255569730|ref|XP_002525829.1| leucoanthocyanidin dioxygenase, putative [Ricinus communis] gi|223534834|gb|EEF36523.1| leucoanthocyanidin dioxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|358635022|dbj|BAL22344.1| oxidoreductase [Ipomoea batatas] Back     alignment and taxonomy information
>gi|255569732|ref|XP_002525830.1| leucoanthocyanidin dioxygenase, putative [Ricinus communis] gi|223534835|gb|EEF36524.1| leucoanthocyanidin dioxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|358635020|dbj|BAL22343.1| oxidoreductase [Ipomoea batatas] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query361
TAIR|locus:2086789361 AT3G13610 [Arabidopsis thalian 0.991 0.991 0.656 5.2e-129
TAIR|locus:2035671361 AT1G55290 [Arabidopsis thalian 0.955 0.955 0.662 7.8e-126
TAIR|locus:2090359357 AT3G12900 [Arabidopsis thalian 0.958 0.969 0.494 1.7e-91
TAIR|locus:505006595360 AT5G12270 [Arabidopsis thalian 0.972 0.975 0.458 8e-85
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.900 0.920 0.351 7.2e-52
TAIR|locus:2148403364 AT5G59530 [Arabidopsis thalian 0.903 0.895 0.348 9.5e-50
TAIR|locus:2009130365 AT1G06620 [Arabidopsis thalian 0.905 0.895 0.350 3.7e-48
TAIR|locus:2176466362 AT5G43450 [Arabidopsis thalian 0.944 0.941 0.355 3.7e-48
TAIR|locus:2040575366 AT2G36690 [Arabidopsis thalian 0.916 0.904 0.339 7.7e-48
TAIR|locus:2148303366 AT5G59540 [Arabidopsis thalian 0.875 0.863 0.363 2.6e-47
TAIR|locus:2086789 AT3G13610 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1266 (450.7 bits), Expect = 5.2e-129, P = 5.2e-129
 Identities = 237/361 (65%), Positives = 292/361 (80%)

Query:     1 MAPT--TVLLSDFSDVTDFVVNQGNGVKGLSEMGLKALPKQYIQPLEERFSEKKI-VPHE 57
             MAPT  T   S+ ++VTDFVV +GNGVKGLSE G+KALP+QYIQPLEER   K +    E
Sbjct:     1 MAPTLLTTQFSNPAEVTDFVVYKGNGVKGLSETGIKALPEQYIQPLEERLINKFVNETDE 60

Query:    58 SIPIIDMSKWDDPEVAKSICDAAEMWGFFQVVNHRVPLQVLDRVKAATHRFFGLSAAEKN 117
             +IP+IDMS  D+  VA+++CDAAE WGFFQV+NH VPL+VLD VKAATH+FF L   EK 
Sbjct:    61 AIPVIDMSNPDEDRVAEAVCDAAEKWGFFQVINHGVPLEVLDDVKAATHKFFNLPVEEKR 120

Query:   118 KYSKELSPSNNVRFGTSFNTQAEKALEWKDYLSLFYVSDDEASALWPPACKDEVLEYTKS 177
             K++KE S S  VRFGTSF+  AE+ALEWKDYLSLF+VS+ EA   WP  C++E LEY   
Sbjct:   121 KFTKENSLSTTVRFGTSFSPLAEQALEWKDYLSLFFVSEAEAEQFWPDICRNETLEYINK 180

Query:   178 SEVLIKQLLKVLMKGLKVEGTDEAKEALLMGSVRTNLNYYPICPNPELTVGVGRHSDVST 237
             S+ ++++LL+ L K L V+  DE KE+L MGS+R NLNYYPICPNP+LTVGVGRHSDVS+
Sbjct:   181 SKKMVRRLLEYLGKNLNVKELDETKESLFMGSIRVNLNYYPICPNPDLTVGVGRHSDVSS 240

Query:   238 LTILLQDDIGGLYVRGNDGESWIHVPPISGSLVINIGDALQIMSNGKYRSVEHCVIANGS 297
             LTILLQD IGGL+VR     +W+HVPP++GS VINIGDA+QIMSNG Y+SVEH V+ANG 
Sbjct:   241 LTILLQDQIGGLHVRSLASGNWVHVPPVAGSFVINIGDAMQIMSNGLYKSVEHRVLANGY 300

Query:   298 SNRISVPIFINPRPQDTIGPFPEVLASGEKPVYKQVLYKDYVKHFFRKAHDGKKTVDFAK 357
             +NRISVPIF+NP+P+  IGP PEV+A+GE+P+Y+ VLY DYVK+FFRKAHDGKKTVD+AK
Sbjct:   301 NNRISVPIFVNPKPESVIGPLPEVIANGEEPIYRDVLYSDYVKYFFRKAHDGKKTVDYAK 360

Query:   358 L 358
             +
Sbjct:   361 I 361
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0019748 "secondary metabolic process" evidence=ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0010421 "hydrogen peroxide-mediated programmed cell death" evidence=IMP
GO:0009805 "coumarin biosynthetic process" evidence=RCA;IMP
GO:0051213 "dioxygenase activity" evidence=IDA
GO:0009407 "toxin catabolic process" evidence=RCA
GO:0009611 "response to wounding" evidence=RCA
GO:0010583 "response to cyclopentenone" evidence=RCA
TAIR|locus:2035671 AT1G55290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090359 AT3G12900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006595 AT5G12270 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148403 AT5G59530 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009130 AT1G06620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2176466 AT5G43450 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040575 AT2G36690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148303 AT5G59540 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LHN8F6H1_ARATH1, ., 1, 4, ., 1, 1, ., -0.65650.99160.9916yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.766
4th Layer1.14.11.9LOW CONFIDENCE prediction!
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query361
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 1e-72
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 2e-72
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 7e-71
PLN02947374 PLN02947, PLN02947, oxidoreductase 4e-66
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 1e-60
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 7e-58
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 1e-56
PLN02704335 PLN02704, PLN02704, flavonol synthase 5e-54
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 2e-53
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 6e-52
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 1e-48
PLN02904357 PLN02904, PLN02904, oxidoreductase 1e-48
PLN02216357 PLN02216, PLN02216, protein SRG1 2e-47
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 3e-46
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 1e-45
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 1e-42
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 2e-39
PLN02997325 PLN02997, PLN02997, flavonol synthase 2e-38
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 5e-35
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 1e-32
PLN02485329 PLN02485, PLN02485, oxidoreductase 2e-32
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 1e-31
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 3e-30
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 6e-28
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 5e-26
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 6e-23
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 3e-19
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 2e-05
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information 
 Score =  229 bits (586), Expect = 1e-72
 Identities = 118/354 (33%), Positives = 181/354 (51%), Gaps = 26/354 (7%)

Query: 25  VKGLSEMGLKALPKQYIQPLEER---FSEKKIVPHESIPIIDMSK-WDD-----PEVAKS 75
           V+ LSE GL  +P +Y++P  +R    +        +IP+ID+S  + D         ++
Sbjct: 15  VQSLSESGLPTIPDRYVKPPSQRPNSSNTTSAPAEINIPVIDLSSLFSDDARLRDATLRA 74

Query: 76  ICDAAEMWGFFQVVNHRVPLQVLDRVKAATHRFFGLSAAEKNKYSKELSPSNNVRFGTSF 135
           I +A   WGFFQVVNH V  +++DR + A   FF L    K +Y+   SP+    +G+  
Sbjct: 75  ISEACREWGFFQVVNHGVRPELMDRAREAWREFFHLPLEVKQRYAN--SPATYEGYGSRL 132

Query: 136 NTQAEKALEWKDYLSLFYVSDDEAS-ALWP---PACKDEVLEYTKSSEVLIKQLLKVLMK 191
             +    L+W DY  L Y+         WP   P+C++ + EY +    L  +L+KVL  
Sbjct: 133 GVEKGAILDWSDYYFLHYLPSSLKDPNKWPSLPPSCRELIEEYGEEVVKLCGRLMKVLSV 192

Query: 192 GLKVEGTDEAKEAL-----LMGSVRTNLNYYPICPNPELTVGVGRHSDVSTLTILLQDD- 245
            L +E  D  + A      +   +R N  YYP CP P+LT+G+  HSD   +TILL DD 
Sbjct: 193 NLGLEE-DRLQNAFGGEDGVGACLRVN--YYPKCPQPDLTLGLSPHSDPGGMTILLPDDN 249

Query: 246 IGGLYVRGNDGESWIHVPPISGSLVINIGDALQIMSNGKYRSVEHCVIANGSSNRISVPI 305
           + GL VR    ++WI V P+  + ++NIGD +Q++SN  Y+SVEH VI N +  R+S+  
Sbjct: 250 VAGLQVR--RDDAWITVKPVPDAFIVNIGDQIQVLSNAIYKSVEHRVIVNSAKERVSLAF 307

Query: 306 FINPRPQDTIGPFPEVLASGEKPVYKQVLYKDYVKHFFRKAHDGKKTVDFAKLS 359
           F NP+    I P  E++      +Y  + + +Y      K   GK  V+  K  
Sbjct: 308 FYNPKSDLPIEPLKELVTPDRPALYPPMTFDEYRLFIRTKGPRGKSQVESLKSP 361

Length = 362
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 361
PLN02947374 oxidoreductase 100.0
PLN02216357 protein SRG1 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02904357 oxidoreductase 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02704335 flavonol synthase 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02997325 flavonol synthase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02485329 oxidoreductase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.92
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.89
PLN03176120 flavanone-3-hydroxylase; Provisional 99.88
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.24
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 94.82
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 93.12
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 91.28
TIGR02466201 conserved hypothetical protein. This family consis 82.36
>PLN02947 oxidoreductase Back     alignment and domain information 
Probab=100.00  E-value=1.4e-85  Score=640.32  Aligned_cols=333  Identities=33%  Similarity=0.599  Sum_probs=298.6

Q ss_pred             cchHHHhhcCCCCCCccccCCCccccccccC-----CCCCCcceeeCCC---CCcHHHHHHHHHHHHhcceEEEecCCCC
Q 018077           23 NGVKGLSEMGLKALPKQYIQPLEERFSEKKI-----VPHESIPIIDMSK---WDDPEVAKSICDAAEMWGFFQVVNHRVP   94 (361)
Q Consensus        23 ~~v~~l~~~~~~~vP~~y~~p~~~~~~~~~~-----~~~~~iPvIDls~---~~~~~~~~~l~~A~~~~GfF~v~nhGi~   94 (361)
                      ++||.|+++|+++||++|++|+++++.....     ....+||||||+.   ..+..++++|++||++||||||+|||||
T Consensus        26 ~~v~~l~~~~~~~vp~~yv~p~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~l~~Ac~~~GFF~v~nHGIp  105 (374)
T PLN02947         26 KGVKHLCDSGITKVPAKYILPASDRPGLTRDEAIAASGNLKLPVIDLAELRGSNRPHVLATLAAACREYGFFQVVNHGVP  105 (374)
T ss_pred             cCHHHHHhcCCCcCCHHhcCCchhccccccccccccCCCCCCCeEECcccCCccHHHHHHHHHHHHHHCcEEEEEcCCCC
Confidence            4799999999999999999999988753210     1335799999987   2467799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCHHHHhhhccCCCCCCcccccccccccccccCCcccccccccccCcccccCCCc---chHHHH
Q 018077           95 LQVLDRVKAATHRFFGLSAAEKNKYSKELSPSNNVRFGTSFNTQAEKALEWKDYLSLFYVSDDEASALWPP---ACKDEV  171 (361)
Q Consensus        95 ~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~GY~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~wP~---~fr~~~  171 (361)
                      .++++++++.+++||+||.|+|+++...+. ....||+..+....++..+|+|.+.+...|.....+.||+   +||+++
T Consensus       106 ~~li~~~~~~~~~FF~LP~eeK~k~~~~~~-~~~~gyg~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~WP~~~~~fr~~~  184 (374)
T PLN02947        106 SEVIGGMIDVARRFFELPLEERAKYMSADM-RAPVRYGTSFNQNKDAVFCWRDFLKLVCHPLSDVLPHWPSSPADLRKVA  184 (374)
T ss_pred             HHHHHHHHHHHHHHhcCCHHHHhhhhcccC-CCCeeeccccccccccccCceeceeeecCCcccccccCccchHHHHHHH
Confidence            999999999999999999999999865543 3356887655444566789999988766665444689996   899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCC--chhHHHHhhcCCccceeeccCCCCCCCCCCCccccccCCCeEEEeeCCCCCc
Q 018077          172 LEYTKSSEVLIKQLLKVLMKGLKVEG--TDEAKEALLMGSVRTNLNYYPICPNPELTVGVGRHSDVSTLTILLQDDIGGL  249 (361)
Q Consensus       172 ~~y~~~~~~l~~~ll~~ls~~Lgl~~--~~~~~~~~~~~~~~lrl~~YPp~p~~~~~~g~~~HtD~~~lTlL~qd~v~GL  249 (361)
                      ++|+++|.+|+.+|+++||++|||++  .++|.+.+....+.+|+|||||||+++.++|+++|||+|+||||+||+++||
T Consensus       185 ~~Y~~~~~~L~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrln~YPp~p~~~~~~G~~~HTD~g~lTlL~Qd~v~GL  264 (374)
T PLN02947        185 ATYAKATKRLFLELMEAILESLGIVKRGSDELLEEFEAGSQMMVVNCYPACPEPELTLGMPPHSDYGFLTLLLQDEVEGL  264 (374)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCccchHHHHHHhcCcceeeeeecCCCCCCcccccCCCCccCCCceEEEEecCCCCe
Confidence            99999999999999999999999963  1577777766778999999999999999999999999999999999999999


Q ss_pred             eEEeCCCCceEEeCCCCCceEEEechhHHHhhcCcccccccccccCCCCCccccccccCCCCCCeeecCCcccCCCCCCC
Q 018077          250 YVRGNDGESWIHVPPISGSLVINIGDALQIMSNGKYRSVEHCVIANGSSNRISVPIFINPRPQDTIGPFPEVLASGEKPV  329 (361)
Q Consensus       250 qV~~~g~~~W~~V~p~pgalvVnvGd~le~~TnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~P~~~lv~~~~p~~  329 (361)
                      ||+++|  +|++|+|+||++||||||+||+||||+|||++|||++++.++|||||||+.|+.|++|+|+++|+++++|++
T Consensus       265 QV~~~g--~Wi~V~p~pga~VVNvGD~Lq~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~Pl~~lv~~~~p~~  342 (374)
T PLN02947        265 QIMHAG--RWVTVEPIPGSFVVNVGDHLEIFSNGRYKSVLHRVRVNSTKPRISVASLHSLPFERVVGPAPELVDEQNPRR  342 (374)
T ss_pred             eEeECC--EEEeCCCCCCeEEEEeCceeeeeeCCEEeccccccccCCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCc
Confidence            999999  999999999999999999999999999999999999988889999999999999999999999999999999


Q ss_pred             CCcccHHHHHHHHHHhcCCCCcccccccc
Q 018077          330 YKQVLYKDYVKHFFRKAHDGKKTVDFAKL  358 (361)
Q Consensus       330 y~~~t~~eyl~~~~~~~~~~~~~~~~~~~  358 (361)
                      |++++|+||++.++++...|++.++.+|+
T Consensus       343 Y~~~~~~ey~~~~~~~~~~~~~~l~~~~~  371 (374)
T PLN02947        343 YMDTDFATFLAYLASAEGKHKNFLESRKL  371 (374)
T ss_pred             CCCCCHHHHHHHHHHhccCchhhhhhhhc
Confidence            99999999999999999999999999986

>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query361
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 3e-42
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 3e-42
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 2e-41
1w9y_A319 The Structure Of Acc Oxidase Length = 319 1e-30
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 6e-15
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 2e-14
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 6e-06
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 6e-06
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure 
Iteration: 1

 Score =  169 bits (427), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/339 (32%), Positives = 173/339 (51%), Gaps = 27/339 (7%)
Query: 25  VKGLSEMGLKALPKQYIQPLEER------FSEKKIVPHESIPIIDMSKWD-DPEVAKSIC 77
           V+ L++ G+ ++PK+YI+P EE       F E+K      +P ID+   + D E  +  C
Sbjct: 7   VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENC 66
Query: 78  -----DAAEMWGFFQVVNHRVPLQVLDRVKAATHRFFGLSAAEKNKYSKELSPSNNVRFG 132
                 A+  WG   ++NH +P  +++RVK A   FF LS  EK KY+ + +      +G
Sbjct: 67  IEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYG 126
Query: 133 TSFNTQAEKALEWKDY-LSLFYVSDDEASALWPPACKDEV---LEYTKSSEVLIKQLLKV 188
           +     A   LEW+DY   L Y  +    ++WP    D +    EY K   +L  ++ K 
Sbjct: 127 SKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKA 186
Query: 189 LMKGLKVEGTDEAKE--ALLMGSVRTNLNYYPICPNPELTVGVGRHSDVSTLTILLQDDI 246
           L  GL +E     KE   L    ++  +NYYP CP PEL +GV  H+DVS LT +L + +
Sbjct: 187 LSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMV 246
Query: 247 GG--LYVRGNDGESWIHVPPISGSLVINIGDALQIMSNGKYRSVEHCVIANGSSNRISVP 304
            G  L+  G     W+    +  S+V++IGD L+I+SNGKY+S+ H  + N    RIS  
Sbjct: 247 PGLQLFYEGK----WVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWA 302
Query: 305 IFINPRPQDTI--GPFPEVLASGEKPVYKQVLYKDYVKH 341
           +F  P P+D I   P PE+++      +    +  +++H
Sbjct: 303 VFCEP-PKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEH 340
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query361
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-130
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-113
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 2e-79
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 3e-79
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 1e-78
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 1e-68
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  376 bits (969), Expect = e-130
 Identities = 102/353 (28%), Positives = 172/353 (48%), Gaps = 25/353 (7%)

Query: 25  VKGLSEMGLKALPKQYIQPLEER------FSEKKIVPHESIPIIDMSKWDDP------EV 72
           V+ L++ G+ ++PK+YI+P EE       F E+K      +P ID+   +          
Sbjct: 7   VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENC 66

Query: 73  AKSICDAAEMWGFFQVVNHRVPLQVLDRVKAATHRFFGLSAAEKNKYSKELSPSNNVRFG 132
            + +  A+  WG   ++NH +P  +++RVK A   FF LS  EK KY+ + +      +G
Sbjct: 67  IEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYG 126

Query: 133 TSFNTQAEKALEWKDYLSLF-YVSDDEASALWP---PACKDEVLEYTKSSEVLIKQLLKV 188
           +     A   LEW+DY     Y  +    ++WP       +   EY K   +L  ++ K 
Sbjct: 127 SKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKA 186

Query: 189 LMKGLKVEGT--DEAKEALLMGSVRTNLNYYPICPNPELTVGVGRHSDVSTLTILLQDDI 246
           L  GL +E    ++    L    ++  +NYYP CP PEL +GV  H+DVS LT +L + +
Sbjct: 187 LSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMV 246

Query: 247 GGLYVRGNDGESWIHVPPISGSLVINIGDALQIMSNGKYRSVEHCVIANGSSNRISVPIF 306
            GL +   +G+ W+    +  S+V++IGD L+I+SNGKY+S+ H  + N    RIS  +F
Sbjct: 247 PGLQLF-YEGK-WVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVF 304

Query: 307 INPRPQDT-IGPFPEVLASGEKPVYKQVLYKDYVKHFFRKAHDGKKTVDFAKL 358
             P      + P PE+++      +    +  +++H       GK+  +    
Sbjct: 305 CEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKL----FGKEQEELVSE 353
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query361
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 93.56
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 91.75
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 87.09
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 83.82
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 83.51
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=1.1e-83  Score=625.18  Aligned_cols=327  Identities=30%  Similarity=0.562  Sum_probs=292.8

Q ss_pred             ccchHHHhhcCCCCCCccccCCCcccccccc---CC---CCCCcceeeCCC--CC----cHHHHHHHHHHHHhcceEEEe
Q 018077           22 GNGVKGLSEMGLKALPKQYIQPLEERFSEKK---IV---PHESIPIIDMSK--WD----DPEVAKSICDAAEMWGFFQVV   89 (361)
Q Consensus        22 ~~~v~~l~~~~~~~vP~~y~~p~~~~~~~~~---~~---~~~~iPvIDls~--~~----~~~~~~~l~~A~~~~GfF~v~   89 (361)
                      .++||+|+++|+++||++|++|+++++....   ..   ...+||||||+.  .+    +.+++++|.+||++||||||+
T Consensus         4 ~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~   83 (356)
T 1gp6_A            4 VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI   83 (356)
T ss_dssp             CCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             cccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEe
Confidence            3579999999999999999999888775321   00   123699999987  22    356899999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHHHhcCCHHHHhhhccCCCCCCcccccccccccccccCCcccccccccccCc-ccccCCCc---
Q 018077           90 NHRVPLQVLDRVKAATHRFFGLSAAEKNKYSKELSPSNNVRFGTSFNTQAEKALEWKDYLSLFYVSDD-EASALWPP---  165 (361)
Q Consensus        90 nhGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~GY~~~~~~~~~~~~d~~e~~~~~~~p~~-~~~~~wP~---  165 (361)
                      ||||+.++++++++.+++||+||.|+|+++.........+||+........+..||+|.|.+...|.. ..+|.||+   
T Consensus        84 nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~  163 (356)
T 1gp6_A           84 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPS  163 (356)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSST
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcch
Confidence            99999999999999999999999999999987642125789976554455678899999998766654 45789997   


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHhh---cCCccceeeccCCCCCCCCCCCccccccCCCeEEEe
Q 018077          166 ACKDEVLEYTKSSEVLIKQLLKVLMKGLKVEGTDEAKEALL---MGSVRTNLNYYPICPNPELTVGVGRHSDVSTLTILL  242 (361)
Q Consensus       166 ~fr~~~~~y~~~~~~l~~~ll~~ls~~Lgl~~~~~~~~~~~---~~~~~lrl~~YPp~p~~~~~~g~~~HtD~~~lTlL~  242 (361)
                      +||+.+++|+++|.+|+.+||++|+++|||++ ++|.+.+.   ...+.||+||||||++++.++|+++|||+|+||||+
T Consensus       164 ~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~-~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~  242 (356)
T 1gp6_A          164 DYIEATSEYAKCLRLLATKVFKALSVGLGLEP-DRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL  242 (356)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCT-THHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEE
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCH-HHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEE
Confidence            99999999999999999999999999999999 99999987   477899999999999999999999999999999999


Q ss_pred             eCCCCCceEEeCCCCceEEeCCCCCceEEEechhHHHhhcCcccccccccccCCCCCccccccccCCCCCC-eeecCCcc
Q 018077          243 QDDIGGLYVRGNDGESWIHVPPISGSLVINIGDALQIMSNGKYRSVEHCVIANGSSNRISVPIFINPRPQD-TIGPFPEV  321 (361)
Q Consensus       243 qd~v~GLqV~~~g~~~W~~V~p~pgalvVnvGd~le~~TnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~-~i~P~~~l  321 (361)
                      ||+++||||+++|  +|++|+|+||++||||||+||+||||+|||++|||++++.++|||++||++|+.|+ +|+|+++|
T Consensus       243 qd~v~GLQV~~~g--~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~  320 (356)
T 1gp6_A          243 HNMVPGLQLFYEG--KWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEM  320 (356)
T ss_dssp             ECSCCCEEEEETT--EEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGG
T ss_pred             EcCCCCeEEecCC--cEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhh
Confidence            9999999999999  99999999999999999999999999999999999999889999999999999999 99999999


Q ss_pred             cCCCCCCCCCcccHHHHHHHHHHhcCCCCc
Q 018077          322 LASGEKPVYKQVLYKDYVKHFFRKAHDGKK  351 (361)
Q Consensus       322 v~~~~p~~y~~~t~~eyl~~~~~~~~~~~~  351 (361)
                      +++++|++|+++||+||+..+++++++|+.
T Consensus       321 ~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~  350 (356)
T 1gp6_A          321 VSVESPAKFPPRTFAQHIEHKLFGKEQEEL  350 (356)
T ss_dssp             CCSSSCCSSCCEEHHHHHHHHHHHHHHHHC
T ss_pred             cCCCCCccCCCccHHHHHHHHHHhccCcch
Confidence            999999999999999999999988776654
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 361
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 7e-69
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 1e-57
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 1e-51
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 3e-39
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  217 bits (554), Expect = 7e-69
 Identities = 97/344 (28%), Positives = 166/344 (48%), Gaps = 22/344 (6%)

Query: 25  VKGLSEMGLKALPKQYIQPLEER------FSEKKIVPHESIPIIDMSKWDDP------EV 72
           V+ L++ G+ ++PK+YI+P EE       F E+K      +P ID+   +          
Sbjct: 6   VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENC 65

Query: 73  AKSICDAAEMWGFFQVVNHRVPLQVLDRVKAATHRFFGLSAAEKNKYSKELSPSNNVRFG 132
            + +  A+  WG   ++NH +P  +++RVK A   FF LS  EK KY+ + +      +G
Sbjct: 66  IEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYG 125

Query: 133 TSFNTQAEKALEWKDYLSLFYVSDDEASALW----PPACKDEVLEYTKSSEVLIKQLLK- 187
           +     A   LEW+DY       +++         P    +   EY K   +L  ++ K 
Sbjct: 126 SKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKA 185

Query: 188 -VLMKGLKVEGTDEAKEALLMGSVRTNLNYYPICPNPELTVGVGRHSDVSTLTILLQDDI 246
             +  GL+ +  ++    L    ++  +NYYP CP PEL +GV  H+DVS LT +L + +
Sbjct: 186 LSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMV 245

Query: 247 GGLYVRGNDGESWIHVPPISGSLVINIGDALQIMSNGKYRSVEHCVIANGSSNRISVPIF 306
            GL +       W+    +  S+V++IGD L+I+SNGKY+S+ H  + N    RIS  +F
Sbjct: 246 PGLQLFYEGK--WVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVF 303

Query: 307 INPRPQDTI-GPFPEVLASGEKPVYKQVLYKDYVKH-FFRKAHD 348
             P     +  P PE+++      +    +  +++H  F K  +
Sbjct: 304 CEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQE 347
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query361
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 87.44
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.6e-79  Score=592.44  Aligned_cols=320  Identities=30%  Similarity=0.570  Sum_probs=283.2

Q ss_pred             cchHHHhhcCCCCCCccccCCCcccccccc------CCCCCCcceeeCCC--C----CcHHHHHHHHHHHHhcceEEEec
Q 018077           23 NGVKGLSEMGLKALPKQYIQPLEERFSEKK------IVPHESIPIIDMSK--W----DDPEVAKSICDAAEMWGFFQVVN   90 (361)
Q Consensus        23 ~~v~~l~~~~~~~vP~~y~~p~~~~~~~~~------~~~~~~iPvIDls~--~----~~~~~~~~l~~A~~~~GfF~v~n   90 (361)
                      ..||+|+++|+++||++|++|+.+++.+..      ..+..+||||||+.  .    .+++++++|++||++||||||+|
T Consensus         4 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~n   83 (349)
T d1gp6a_           4 ERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLIN   83 (349)
T ss_dssp             CCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEES
T ss_pred             cchHHHHhCCCccCCHhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEEc
Confidence            469999999999999999999999887632      23456899999987  1    24578999999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHHhcCCHHHHhhhccCCCCCCcccccccccccccccCCcccccccccccCc-ccccCCCc---c
Q 018077           91 HRVPLQVLDRVKAATHRFFGLSAAEKNKYSKELSPSNNVRFGTSFNTQAEKALEWKDYLSLFYVSDD-EASALWPP---A  166 (361)
Q Consensus        91 hGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~GY~~~~~~~~~~~~d~~e~~~~~~~p~~-~~~~~wP~---~  166 (361)
                      |||+.++++++++++++||+||.|+|++|......+...||+........+..+|.+.+.....+.. ..++.||+   .
T Consensus        84 HGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp~~~~~  163 (349)
T d1gp6a_          84 HGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSD  163 (349)
T ss_dssp             CSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSSTT
T ss_pred             cCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhcccccccccccccccccccch
Confidence            9999999999999999999999999999987554234455655544455666778777654444433 56789997   8


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHhh---cCCccceeeccCCCCCCCCCCCccccccCCCeEEEee
Q 018077          167 CKDEVLEYTKSSEVLIKQLLKVLMKGLKVEGTDEAKEALL---MGSVRTNLNYYPICPNPELTVGVGRHSDVSTLTILLQ  243 (361)
Q Consensus       167 fr~~~~~y~~~~~~l~~~ll~~ls~~Lgl~~~~~~~~~~~---~~~~~lrl~~YPp~p~~~~~~g~~~HtD~~~lTlL~q  243 (361)
                      |++.+++|+++|.+|+.+|+++++++||+++ ++|.+.+.   ...+.||++|||||+.++..+|+++|||+|+||||+|
T Consensus       164 f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~-~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q  242 (349)
T d1gp6a_         164 YIEATSEYAKCLRLLATKVFKALSVGLGLEP-DRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH  242 (349)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTSCT-THHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHhhhHHHHHHcCCCH-HHHHHHhccccccceeeeecccccccchhhccccccCCCCcceEEEec
Confidence            9999999999999999999999999999999 99998874   3567899999999999999999999999999999999


Q ss_pred             CCCCCceEEeCCCCceEEeCCCCCceEEEechhHHHhhcCcccccccccccCCCCCccccccccCCCCCCee-ecCCccc
Q 018077          244 DDIGGLYVRGNDGESWIHVPPISGSLVINIGDALQIMSNGKYRSVEHCVIANGSSNRISVPIFINPRPQDTI-GPFPEVL  322 (361)
Q Consensus       244 d~v~GLqV~~~g~~~W~~V~p~pgalvVnvGd~le~~TnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i-~P~~~lv  322 (361)
                      |.++||||+++|  +|++|+|.+|++|||+||+||+||||+|||++|||+.+++++||||+||++|+.|++| +|+++||
T Consensus       243 ~~~~GLqv~~~g--~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~~~v  320 (349)
T d1gp6a_         243 NMVPGLQLFYEG--KWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMV  320 (349)
T ss_dssp             CSCCCEEEEETT--EEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGC
T ss_pred             cCCcceeeecCC--ceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCHHHc
Confidence            999999999999  9999999999999999999999999999999999999999999999999999999865 8999999


Q ss_pred             CCCCCCCCCcccHHHHHHHHHHh
Q 018077          323 ASGEKPVYKQVLYKDYVKHFFRK  345 (361)
Q Consensus       323 ~~~~p~~y~~~t~~eyl~~~~~~  345 (361)
                      ++++|++|+++||+||++.++..
T Consensus       321 ~~~~p~~y~~~t~~e~~~~rl~~  343 (349)
T d1gp6a_         321 SVESPAKFPPRTFAQHIEHKLFG  343 (349)
T ss_dssp             CSSSCCSSCCEEHHHHHHHHHHH
T ss_pred             CCCCCCCCCCccHHHHHHHHHhc
Confidence            99999999999999999998754
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure