Citrus Sinensis ID: 018097

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-
MSCQDWPEPIVRVQSLSESGSTDIPDRYVKPPAERPVLPNSRINGDDEKINIPIINLAGLDGGDENARREILGQISAACREWGFFQVVNHGVRHELMDDARENWRQFFHSPMEVKQAYGNSPKTYEGYGSRLGVEKGAILDWSDYYFLHYRPCSLKDFNKWPATPASCREVIDEYCKELVRLSGRLMKVLSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFYNPKSDIPIEPVKELVTEESPSLYPPMTFDEYRLFIRTRGPKGKSQVESMKSPR
ccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHccccHHHHHHHcccccccEEEccccccccccccccEEEEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccEEEEEEcccccccccccccccccccccccEEEEEccccccEEEEEccEEEEcccccccEEEEcccEEEEEEcccccccccEEEccccccEEEEEEEEcccccccEEccccccccccccccccccHHHHHHHHHHcccccccccccccccc
ccccccccccHHHHHHHHcccccccHHcEcccccccccccccccccccEccccEEEcHHHHcccHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHEcEHHHcEccEEEccccccccccccccEEEEEEEEcHHHccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHccHccccEEEEEcccccccccccEcccccccccccEEEEEcccccccEEEEEccEEEEcccccccEEEEEcHHHHHHcccccccccEEEcccccccEEEEEEEEEcccccEEcccHHHcccccccccccccHHHHHHHHHHHccccccHHHHHcccc
mscqdwpepivrvqslsesgstdipdryvkppaerpvlpnsringddekinipiinlagldggdeNARREILGQISAACREWGFFQVVNHGVRHELMDDARENWRQFFhspmevkqaygnspktyegygsrlgvekgaildwsdyyflhyrpcslkdfnkwpatpascREVIDEYCKELVRLSGRLMKVLSINLgisedrlqnafggdnigaclrvnfypkcpqpdltlglsshsdpggltlllpdhqvtglqvrkgdnwitvkpakhafIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFfynpksdipiepvkelvteespslyppmtfdeYRLFIrtrgpkgksqvesmkspr
mscqdwpepivrvqslsesgstdipdryvkppaerpvlpnsringddekiNIPIINLAGLDGGDENARREILGQISAACREWGFFQVVNHGVRHELMDDARENWRQFFHSPMEVKQAYGNSPKTYEGYGSRLGVEKGAILDWSDYYFLHYRPCSLKDFNKWPATPASCREVIDEYCKELVRLSGRLMKVLSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFynpksdipiepVKELVteespslyppmtfdEYRLFIRtrgpkgksqvesmkspr
MSCQDWPEPIVRVQSLSESGSTDIPDRYVKPPAERPVLPNSRINGDDEKINIPIINLAGLDGGDENARREILGQISAACREWGFFQVVNHGVRHELMDDARENWRQFFHSPMEVKQAYGNSPKTYEGYGSRLGVEKGAILDWSDYYFLHYRPCSLKDFNKWPATPASCREVIDEYCKELVRLSGRLMKVLSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFYNPKSDIPIEPVKELVTEESPSLYPPMTFDEYRLFIRTRGPKGKSQVESMKSPR
************************************************KINIPIINLAGLDGGDENARREILGQISAACREWGFFQVVNHGVRHELMDDARENWRQFFHSPMEVKQAYGNSPKTYEGYGSRLGVEKGAILDWSDYYFLHYRPCSLKDFNKWPATPASCREVIDEYCKELVRLSGRLMKVLSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFYNPKSDIPIEPVKELV******LYPPMTFDEYRLFIR*****************
****DWPEPIVRVQSLSESGSTDIPDRYVKPPAER***********DEKINIPIINLAGLDGGDENARREILGQISAACREWGFFQVVNHGVRHELMDDARENWRQFFHSPMEVKQAYGNSPKTYEGYGSRLGVEKGAILDWSDYYFLHYRPCSLKDFNKWPATPASCREVIDEYCKELVRLSGRLMKVLSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFYNPKSDIPIEPVKELVTEESPSLYPPMTFDEYRLFIRTRGPKGKSQVESMKS**
MSCQDWPEPIVRVQSLSESGSTDIPDRYVKPPAERPVLPNSRINGDDEKINIPIINLAGLDGGDENARREILGQISAACREWGFFQVVNHGVRHELMDDARENWRQFFHSPMEVKQAYGNSPKTYEGYGSRLGVEKGAILDWSDYYFLHYRPCSLKDFNKWPATPASCREVIDEYCKELVRLSGRLMKVLSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFYNPKSDIPIEPVKELVTEESPSLYPPMTFDEYRLFIRTR***************
*****WPEPIVRVQSLSESGSTDIPDRYVKPPAERPVLPNSRINGDDEKINIPIINLAGLDGGDENARREILGQISAACREWGFFQVVNHGVRHELMDDARENWRQFFHSPMEVKQAYGNSPKTYEGYGSRLGVEKGAILDWSDYYFLHYRPCSLKDFNKWPATPASCREVIDEYCKELVRLSGRLMKVLSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFYNPKSDIPIEPVKELVTEESPSLYPPMTFDEYRLFIRTRGPKG*SQ*E**K***
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSCQDWPEPIVRVQSLSESGSTDIPDRYVKPPAERPVLPNSRINGDDEKINIPIINLAGLDGGDENARREILGQISAACREWGFFQVVNHGVRHELMDDARENWRQFFHSPMEVKQAYGNSPKTYEGYGSRLGVEKGAILDWSDYYFLHYRPCSLKDFNKWPATPASCREVIDEYCKELVRLSGRLMKVLSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFYNPKSDIPIEPVKELVTEESPSLYPPMTFDEYRLFIRTRGPKGKSQVESMKSPR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query361 2.2.26 [Sep-21-2011]
P51091357 Leucoanthocyanidin dioxyg N/A no 0.916 0.927 0.369 2e-62
O04274362 Leucoanthocyanidin dioxyg N/A no 0.936 0.933 0.362 1e-60
D4N502360 Codeine O-demethylase OS= N/A no 0.955 0.958 0.361 6e-60
Q96323356 Leucoanthocyanidin dioxyg no no 0.919 0.932 0.354 1e-59
D4N501364 Probable 2-oxoglutarate/F N/A no 0.947 0.939 0.348 7e-59
D4N500364 Thebaine 6-O-demethylase N/A no 0.955 0.947 0.362 1e-58
P51092430 Leucoanthocyanidin dioxyg N/A no 0.911 0.765 0.374 2e-58
Q39224358 Protein SRG1 OS=Arabidops no no 0.936 0.944 0.335 2e-58
Q05963356 Naringenin,2-oxoglutarate N/A no 0.833 0.845 0.390 5e-57
P05116315 1-aminocyclopropane-1-car N/A no 0.822 0.942 0.386 3e-56
>sp|P51091|LDOX_MALDO Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1 Back     alignment and function desciption
 Score =  239 bits (610), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 128/346 (36%), Positives = 202/346 (58%), Gaps = 15/346 (4%)

Query: 12  RVQSLSESGSTDIPDRYVKPPAERPVLPNSRINGDDEKIN----IPIINLAGLDGGDENA 67
           RV++L+ SG + IP  Y++P  E   L N     + EK N    +P I+L  ++  +E  
Sbjct: 10  RVETLAGSGISTIPKEYIRPKDE---LVNIGDIFEQEKNNEGPQVPTIDLKEIESDNEKV 66

Query: 68  RREILGQISAACREWGFFQVVNHGVRHELMDDARENWRQFFHSPMEVKQAYGNSPKT--Y 125
           R +   ++  A  +WG   +VNHG+  ELMD  R+  + FF  P+E K+ Y N   +   
Sbjct: 67  RAKCREKLKKAAVDWGVMHLVNHGISDELMDKVRKAGKAFFDLPIEQKEKYANDQASGKI 126

Query: 126 EGYGSRLGVEKGAILDWSDYYFLHYRPCSLKDFNKWPATPASCREVIDEYCKELVRLSGR 185
           +GYGS+L       L+W DY+F    P   +D + WP TPA   E   EY K+L  L+ +
Sbjct: 127 QGYGSKLANNASGQLEWEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEYAKQLRELATK 186

Query: 186 LMKVLSINLGISEDRLQNAFGG-DNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLL 244
           ++KVLS+ LG+ E RL+   GG + +   +++N+YPKCPQP+L LG+ +H+D   LT +L
Sbjct: 187 VLKVLSLGLGLDEGRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL 246

Query: 245 PDHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSL 304
             + V GLQ+     W+T K   ++ +++IGD +++LSN  YKS+ HR  VN    R+S 
Sbjct: 247 -HNMVPGLQLFYEGKWVTAKCVPNSIVMHIGDTLEILSNGKYKSILHRGMVNKEKVRISW 305

Query: 305 AFFYN-PKSDIPIEPVKELVTEESPSLYPPMTFDE---YRLFIRTR 346
           A F   PK  I ++P+ E V+E+ P+++PP TF E   ++LF +++
Sbjct: 306 AVFCEPPKEKIILKPLPETVSEDEPAMFPPRTFAEHIQHKLFRKSQ 351
Oxidation of leucoanthocyanidins into anthocyanidins.
Malus domestica (taxid: 3750)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: 1EC: 9
>sp|O04274|LDOX_PERFR Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1 Back     alignment and function description
>sp|D4N502|DIOX3_PAPSO Codeine O-demethylase OS=Papaver somniferum GN=CODM PE=1 SV=1 Back     alignment and function description
>sp|Q96323|LDOX_ARATH Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1 Back     alignment and function description
>sp|D4N501|DIOX2_PAPSO Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum GN=DIOX2 PE=2 SV=1 Back     alignment and function description
>sp|D4N500|DIOX1_PAPSO Thebaine 6-O-demethylase OS=Papaver somniferum GN=T6ODM PE=1 SV=1 Back     alignment and function description
>sp|P51092|LDOX_PETHY Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1 Back     alignment and function description
>sp|Q39224|SRG1_ARATH Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1 Back     alignment and function description
>sp|Q05963|FL3H_CALCH Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1 Back     alignment and function description
>sp|P05116|ACCO1_SOLLC 1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query361
224101153358 predicted protein [Populus trichocarpa] 0.977 0.986 0.781 1e-162
356568250361 PREDICTED: flavonol synthase/flavanone 3 0.977 0.977 0.770 1e-159
357461273359 Leucoanthocyanidin dioxygenase [Medicago 0.986 0.991 0.744 1e-158
356539983358 PREDICTED: codeine O-demethylase-like [G 0.980 0.988 0.756 1e-157
255636356361 unknown [Glycine max] 0.977 0.977 0.756 1e-157
356551436361 PREDICTED: codeine O-demethylase-like [G 0.986 0.986 0.758 1e-157
224109308358 predicted protein [Populus trichocarpa] 0.980 0.988 0.765 1e-157
356501166364 PREDICTED: leucoanthocyanidin dioxygenas 0.994 0.986 0.758 1e-157
388512121367 unknown [Lotus japonicus] 0.983 0.967 0.750 1e-156
357492715358 1-aminocyclopropane-1-carboxylate oxidas 0.986 0.994 0.734 1e-154
>gi|224101153|ref|XP_002312162.1| predicted protein [Populus trichocarpa] gi|222851982|gb|EEE89529.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 279/357 (78%), Positives = 307/357 (85%), Gaps = 4/357 (1%)

Query: 5   DWPEPIVRVQSLSESGSTDIPDRYVKPPAERPVLPNSRINGDDEKINIPIINLAGLDGGD 64
           DWPEPIVRVQSLS+SG+  IP+RYVKPP ERP + NS  + D   +NIP+I+L GL G D
Sbjct: 6   DWPEPIVRVQSLSDSGTPLIPERYVKPPLERPSI-NSTASMD---VNIPVIDLVGLYGDD 61

Query: 65  ENARREILGQISAACREWGFFQVVNHGVRHELMDDARENWRQFFHSPMEVKQAYGNSPKT 124
              R  IL QIS ACREWGFFQV+NHGV  +LMD ARE WRQFFHSPMEVKQAY N+PKT
Sbjct: 62  HALRAAILDQISIACREWGFFQVINHGVSPQLMDRAREAWRQFFHSPMEVKQAYANTPKT 121

Query: 125 YEGYGSRLGVEKGAILDWSDYYFLHYRPCSLKDFNKWPATPASCREVIDEYCKELVRLSG 184
           YEGYGSRLGVEKGAILDWSDYYFLHY P +LKD +KWP  PA CREV+DEY K+LV+L G
Sbjct: 122 YEGYGSRLGVEKGAILDWSDYYFLHYLPSTLKDCSKWPTIPADCREVLDEYGKQLVKLCG 181

Query: 185 RLMKVLSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLL 244
           RLMK+LSINLG+ E+RLQNAFGG+NIGACLRVNFYPKCPQPDL LGLSSHSDPGG+TLLL
Sbjct: 182 RLMKILSINLGLGEERLQNAFGGENIGACLRVNFYPKCPQPDLALGLSSHSDPGGITLLL 241

Query: 245 PDHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSL 304
           PD+ V GLQVRK +NWITVKPA HAFIVNIGDQIQVLSNA YKSVEHRV VNS+ ERVSL
Sbjct: 242 PDNHVPGLQVRKDENWITVKPAPHAFIVNIGDQIQVLSNATYKSVEHRVIVNSSKERVSL 301

Query: 305 AFFYNPKSDIPIEPVKELVTEESPSLYPPMTFDEYRLFIRTRGPKGKSQVESMKSPR 361
           AFFYNPKSDIPIEP+KEL+  + P LYP MTFDEYRLFIR RGP GKSQVES+KSPR
Sbjct: 302 AFFYNPKSDIPIEPLKELLAPDRPPLYPAMTFDEYRLFIRMRGPSGKSQVESLKSPR 358

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356568250|ref|XP_003552326.1| PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Glycine max] Back     alignment and taxonomy information
>gi|357461273|ref|XP_003600918.1| Leucoanthocyanidin dioxygenase [Medicago truncatula] gi|355489966|gb|AES71169.1| Leucoanthocyanidin dioxygenase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356539983|ref|XP_003538471.1| PREDICTED: codeine O-demethylase-like [Glycine max] Back     alignment and taxonomy information
>gi|255636356|gb|ACU18517.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356551436|ref|XP_003544081.1| PREDICTED: codeine O-demethylase-like [Glycine max] Back     alignment and taxonomy information
>gi|224109308|ref|XP_002315155.1| predicted protein [Populus trichocarpa] gi|222864195|gb|EEF01326.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356501166|ref|XP_003519399.1| PREDICTED: leucoanthocyanidin dioxygenase-like [Glycine max] Back     alignment and taxonomy information
>gi|388512121|gb|AFK44122.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|357492715|ref|XP_003616646.1| 1-aminocyclopropane-1-carboxylate oxidase [Medicago truncatula] gi|355517981|gb|AES99604.1| 1-aminocyclopropane-1-carboxylate oxidase [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query361
TAIR|locus:2169697371 AT5G05600 [Arabidopsis thalian 0.986 0.959 0.691 5.2e-136
TAIR|locus:2082058363 JRG21 "jasmonate-regulated gen 0.986 0.980 0.650 4e-129
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.952 0.974 0.575 6.1e-110
TAIR|locus:2089428364 LBO1 "LATERAL BRANCHING OXIDOR 0.947 0.939 0.378 2.1e-61
TAIR|locus:2127686348 AT4G10490 [Arabidopsis thalian 0.842 0.873 0.409 1.2e-58
TAIR|locus:2127218356 LDOX "leucoanthocyanidin dioxy 0.916 0.929 0.359 5.1e-58
TAIR|locus:2127691349 AT4G10500 [Arabidopsis thalian 0.914 0.945 0.394 1.1e-57
TAIR|locus:2020407358 SRG1 "senescence-related gene 0.952 0.960 0.346 1.4e-55
TAIR|locus:2202980356 AT1G78550 [Arabidopsis thalian 0.958 0.971 0.326 9.9e-55
TAIR|locus:2122669356 AT4G25300 [Arabidopsis thalian 0.944 0.957 0.341 9.9e-55
TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1332 (473.9 bits), Expect = 5.2e-136, P = 5.2e-136
 Identities = 249/360 (69%), Positives = 289/360 (80%)

Query:     2 SCQDWPEPIVRVQSLSESGSTDIPDRYVKPPAERPVLPNSRINGDDEKINIPIINLAGLD 61
             S  +WPEPIVRVQSL+ES  + +PDRY+KP + RP              NIPII+L GL 
Sbjct:    16 SMDEWPEPIVRVQSLAESNLSSLPDRYIKPASLRPTTTEDAPTAT----NIPIIDLEGLF 71

Query:    62 GGDENARREILGQISAACREWGFFQVVNHGVRHELMDDARENWRQFFHSPMEVKQAYGNS 121
               +  +   I+ +IS ACR WGFFQVVNHGV+ ELMD ARENWR+FFH P+  K+ Y NS
Sbjct:    72 SEEGLSDDVIMARISEACRGWGFFQVVNHGVKPELMDAARENWREFFHMPVNAKETYSNS 131

Query:   122 PKTYEGYGSRLGVEKGAILDWSDYYFLHYRPCSLKDFNKWPATPASCREVIDEYCKELVR 181
             P+TYEGYGSRLGVEKGA LDWSDYYFLH  P  LKDFNKWP+ P + REVIDEY +ELV+
Sbjct:   132 PRTYEGYGSRLGVEKGASLDWSDYYFLHLLPHHLKDFNKWPSFPPTIREVIDEYGEELVK 191

Query:   182 LSGRLMKVLSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLT 241
             LSGR+M+VLS NLG+ ED+ Q AFGG+NIGACLRVN+YPKCP+P+L LGLS HSDPGG+T
Sbjct:   192 LSGRIMRVLSTNLGLKEDKFQEAFGGENIGACLRVNYYPKCPRPELALGLSPHSDPGGMT 251

Query:   242 LLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANER 301
             +LLPD QV GLQVRK D WITVKP  HAFIVNIGDQIQ+LSN+ YKSVEHRV VNS  ER
Sbjct:   252 ILLPDDQVFGLQVRKDDTWITVKPHPHAFIVNIGDQIQILSNSTYKSVEHRVIVNSDKER 311

Query:   302 VSLAFFYNPKSDIPIEPVKELVTEESPSLYPPMTFDEYRLFIRTRGPKGKSQVESMKSPR 361
             VSLAFFYNPKSDIPI+P++ELV+  +P LYPPMTFD+YRLFIRT+GP+GKS VES  SPR
Sbjct:   312 VSLAFFYNPKSDIPIQPLQELVSTHNPPLYPPMTFDQYRLFIRTQGPQGKSHVESHISPR 371
GO:0005506 "iron ion binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0080167 "response to karrikin" evidence=IEP
GO:0009611 "response to wounding" evidence=RCA
GO:0009620 "response to fungus" evidence=RCA
GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA
GO:0009753 "response to jasmonic acid stimulus" evidence=RCA
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA
TAIR|locus:2082058 JRG21 "jasmonate-regulated gene 21" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089428 LBO1 "LATERAL BRANCHING OXIDOREDUCTASE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127686 AT4G10490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127218 LDOX "leucoanthocyanidin dioxygenase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127691 AT4G10500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020407 SRG1 "senescence-related gene 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202980 AT1G78550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122669 AT4G25300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.766
4th Layer1.14.11.9LOW CONFIDENCE prediction!
3rd Layer1.14.11.130.824
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query361
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 0.0
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 4e-99
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 4e-94
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 6e-90
PLN02947374 PLN02947, PLN02947, oxidoreductase 7e-81
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 4e-80
PLN02216357 PLN02216, PLN02216, protein SRG1 2e-77
PLN02704335 PLN02704, PLN02704, flavonol synthase 2e-77
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 3e-72
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 5e-70
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 2e-69
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 6e-65
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 9e-65
PLN02904357 PLN02904, PLN02904, oxidoreductase 3e-64
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 9e-62
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 1e-61
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 6e-59
PLN02997325 PLN02997, PLN02997, flavonol synthase 7e-55
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 2e-52
PLN02485329 PLN02485, PLN02485, oxidoreductase 2e-46
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 6e-46
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 8e-39
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 3e-37
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 4e-35
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 3e-33
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 2e-30
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 8e-25
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 4e-12
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information 
 Score =  711 bits (1838), Expect = 0.0
 Identities = 275/363 (75%), Positives = 305/363 (84%), Gaps = 4/363 (1%)

Query: 1   MSC-QDWPEPIVRVQSLSESGSTDIPDRYVKPPAERPVLPNSRINGDDEKINIPIINLAG 59
           M+C QDWPEPIVRVQSLSESG   IPDRYVKPP++RP   N+       +INIP+I+L+ 
Sbjct: 2   MNCLQDWPEPIVRVQSLSESGLPTIPDRYVKPPSQRPNSSNT--TSAPAEINIPVIDLSS 59

Query: 60  LDGGDENARREILGQISAACREWGFFQVVNHGVRHELMDDARENWRQFFHSPMEVKQAYG 119
           L   D   R   L  IS ACREWGFFQVVNHGVR ELMD ARE WR+FFH P+EVKQ Y 
Sbjct: 60  LFSDDARLRDATLRAISEACREWGFFQVVNHGVRPELMDRAREAWREFFHLPLEVKQRYA 119

Query: 120 NSPKTYEGYGSRLGVEKGAILDWSDYYFLHYRPCSLKDFNKWPATPASCREVIDEYCKEL 179
           NSP TYEGYGSRLGVEKGAILDWSDYYFLHY P SLKD NKWP+ P SCRE+I+EY +E+
Sbjct: 120 NSPATYEGYGSRLGVEKGAILDWSDYYFLHYLPSSLKDPNKWPSLPPSCRELIEEYGEEV 179

Query: 180 VRLSGRLMKVLSINLGISEDRLQNAFGG-DNIGACLRVNFYPKCPQPDLTLGLSSHSDPG 238
           V+L GRLMKVLS+NLG+ EDRLQNAFGG D +GACLRVN+YPKCPQPDLTLGLS HSDPG
Sbjct: 180 VKLCGRLMKVLSVNLGLEEDRLQNAFGGEDGVGACLRVNYYPKCPQPDLTLGLSPHSDPG 239

Query: 239 GLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSA 298
           G+T+LLPD  V GLQVR+ D WITVKP   AFIVNIGDQIQVLSNA YKSVEHRV VNSA
Sbjct: 240 GMTILLPDDNVAGLQVRRDDAWITVKPVPDAFIVNIGDQIQVLSNAIYKSVEHRVIVNSA 299

Query: 299 NERVSLAFFYNPKSDIPIEPVKELVTEESPSLYPPMTFDEYRLFIRTRGPKGKSQVESMK 358
            ERVSLAFFYNPKSD+PIEP+KELVT + P+LYPPMTFDEYRLFIRT+GP+GKSQVES+K
Sbjct: 300 KERVSLAFFYNPKSDLPIEPLKELVTPDRPALYPPMTFDEYRLFIRTKGPRGKSQVESLK 359

Query: 359 SPR 361
           SPR
Sbjct: 360 SPR 362

Length = 362
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 361
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02216357 protein SRG1 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02947374 oxidoreductase 100.0
PLN02904357 oxidoreductase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02704335 flavonol synthase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02997325 flavonol synthase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02485329 oxidoreductase 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.92
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.9
PLN03176120 flavanone-3-hydroxylase; Provisional 99.9
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.75
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 94.97
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 93.91
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 93.07
PRK15401213 alpha-ketoglutarate-dependent dioxygenase AlkB; Pr 89.42
TIGR02466201 conserved hypothetical protein. This family consis 84.31
PF13532194 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; 83.72
PF13759101 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB 80.88
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information 
Probab=100.00  E-value=2.7e-85  Score=632.45  Aligned_cols=359  Identities=76%  Similarity=1.292  Sum_probs=318.8

Q ss_pred             CCC-CCCCCcccchHHHHhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEeCCCCCCCCHHHHHHHHHHHHHHH
Q 018097            1 MSC-QDWPEPIVRVQSLSESGSTDIPDRYVKPPAERPVLPNSRINGDDEKINIPIINLAGLDGGDENARREILGQISAAC   79 (361)
Q Consensus         1 ~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~   79 (361)
                      |.| ..|+.+++.|+.|++.+..+||++||+|++++|.....  .......+||||||+.+.++++.+|.+++++|.+||
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~--~~~~~~~~iPvIDls~l~~~~~~~r~~~~~~l~~Ac   79 (362)
T PLN02393          2 MNCLQDWPEPIVRVQSLSESGLPTIPDRYVKPPSQRPNSSNT--TSAPAEINIPVIDLSSLFSDDARLRDATLRAISEAC   79 (362)
T ss_pred             CCcccCCCCccchHHHHHhcCCCcCCHHHcCCchhccccccc--cccCcCCCCCeEECccccCCChHHHHHHHHHHHHHH
Confidence            555 67888888999999888999999999999999864210  012244579999999998877778899999999999


Q ss_pred             hhcceEEEEeCCCCHHHHHHHHHHHHHhcCCCHHHHhhhcCCCCCcccccCCCCccCCcccCccccccccccCCCccCCC
Q 018097           80 REWGFFQVVNHGVRHELMDDARENWRQFFHSPMEVKQAYGNSPKTYEGYGSRLGVEKGAILDWSDYYFLHYRPCSLKDFN  159 (361)
Q Consensus        80 ~~~GfF~l~nhGi~~~l~~~~~~~~~~fF~lP~eeK~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~  159 (361)
                      ++||||||+||||+.++++++++.+++||+||.|+|+++...+..++||+...+.......+|+|.|.+...|.....+|
T Consensus        80 ~~~GFF~l~nHGI~~~li~~~~~~~~~FF~LP~eeK~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~~~~~~~~n  159 (362)
T PLN02393         80 REWGFFQVVNHGVRPELMDRAREAWREFFHLPLEVKQRYANSPATYEGYGSRLGVEKGAILDWSDYYFLHYLPSSLKDPN  159 (362)
T ss_pred             HHCcEEEEEeCCCCHHHHHHHHHHHHHHHcCCHHHHHhhhcccCcccccccccccccccccCchhheeeeecCccccchh
Confidence            99999999999999999999999999999999999999986655589996544333345679999887654454445578


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHHhHHhcCCCHHHHHHhhCCCC-CceeEEeecCCCCCCCCCCccccCccCCC
Q 018097          160 KWPATPASCREVIDEYCKELVRLSGRLMKVLSINLGISEDRLQNAFGGDN-IGACLRVNFYPKCPQPDLTLGLSSHSDPG  238 (361)
Q Consensus       160 ~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~~~-~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g  238 (361)
                      .||+.+++|++.+++|+++|.+++..||++|+++||+++++|.+.+.... +.+.+|++|||+|+.++..+|+++|||+|
T Consensus       160 ~wP~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lRl~~YP~~p~~~~~~g~~~HtD~g  239 (362)
T PLN02393        160 KWPSLPPSCRELIEEYGEEVVKLCGRLMKVLSVNLGLEEDRLQNAFGGEDGVGACLRVNYYPKCPQPDLTLGLSPHSDPG  239 (362)
T ss_pred             hCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhCCCccccceeeeeecCCCCCcccccccccccCCc
Confidence            99998899999999999999999999999999999999999999886532 33689999999999988899999999999


Q ss_pred             CceEEecCCCCCCceeecCCeEEEecCCCCeEEEEeCchhhhhhcCccccccceeccCCCCCeeEEEEeecCCCCcceec
Q 018097          239 GLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFYNPKSDIPIEP  318 (361)
Q Consensus       239 ~lTlL~~q~~~~GLqV~~~g~W~~V~p~pg~lvVnvGd~L~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p  318 (361)
                      +||||+|+++++||||+++|+|++|+|.||++|||+||+||+||||+|+|++|||+.++.++|||++||++|+.|++|.|
T Consensus       240 ~lTlL~q~~~v~GLQV~~~g~W~~V~p~pgalVVNiGD~l~~~Tng~~kSt~HRVv~~~~~~R~SiafF~~P~~d~~i~p  319 (362)
T PLN02393        240 GMTILLPDDNVAGLQVRRDDAWITVKPVPDAFIVNIGDQIQVLSNAIYKSVEHRVIVNSAKERVSLAFFYNPKSDLPIEP  319 (362)
T ss_pred             eEEEEeeCCCCCcceeeECCEEEECCCCCCeEEEEcchhhHhhcCCeeeccceecccCCCCCEEEEEEEecCCCCceEeC
Confidence            99999933579999999999999999999999999999999999999999999999988889999999999999999999


Q ss_pred             CccccCCCCCCCCCCccHHHHHHHHHhcCCCCCccccccCCCC
Q 018097          319 VKELVTEESPSLYPPMTFDEYRLFIRTRGPKGKSQVESMKSPR  361 (361)
Q Consensus       319 l~~~v~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~l~~~~~~~  361 (361)
                      +++++++++|++|++++++||+.++..+...+++.++.+|++|
T Consensus       320 l~~~v~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~  362 (362)
T PLN02393        320 LKELVTPDRPALYPPMTFDEYRLFIRTKGPRGKSQVESLKSPR  362 (362)
T ss_pred             cHHhcCCCCCCCCCCccHHHHHHHHHhcccCcchHHhhhccCC
Confidence            9999999999999999999999999999888899999999987

>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A Back     alignment and domain information
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query361
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 8e-61
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 9e-61
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 2e-58
1w9y_A319 The Structure Of Acc Oxidase Length = 319 1e-50
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 7e-17
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 8e-15
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 9e-15
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 8e-12
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure 
Iteration: 1

 Score =  230 bits (587), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 121/341 (35%), Positives = 193/341 (56%), Gaps = 9/341 (2%)
Query: 10  IVRVQSLSESGSTDIPDRYVKPPAERPVLPNSRINGDDEK-INIPIINLAGLDGGDENAR 68
           + RV+SL++SG   IP  Y++P  E   + +  +    E    +P I+L  ++  DE  R
Sbjct: 3   VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIR 62
Query: 69  REILGQISAACREWGFFQVVNHGVRHELMDDARENWRQFFHSPMEVKQAYGNSPKT--YE 126
              + ++  A  +WG   ++NHG+  +LM+  ++   +FF   +E K+ Y N   T   +
Sbjct: 63  ENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQ 122
Query: 127 GYGSRLGVEKGAILDWSDYYFLHYRPCSLKDFNKWPATPASCREVIDEYCKELVRLSGRL 186
           GYGS+L       L+W DY+F    P   +D + WP TP+   E   EY K L  L+ ++
Sbjct: 123 GYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKV 182
Query: 187 MKVLSINLGISEDRLQNAFGG-DNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLP 245
            K LS+ LG+  DRL+   GG + +   +++N+YPKCPQP+L LG+ +H+D   LT +L 
Sbjct: 183 FKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL- 241
Query: 246 DHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLA 305
            + V GLQ+     W+T K    + +++IGD +++LSN  YKS+ HR  VN    R+S A
Sbjct: 242 HNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWA 301
Query: 306 FFYNPKSD-IPIEPVKELVTEESPSLYPPMTFD---EYRLF 342
            F  P  D I ++P+ E+V+ ESP+ +PP TF    E++LF
Sbjct: 302 VFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLF 342
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query361
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-171
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-156
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 1e-108
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 1e-101
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 1e-89
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 7e-84
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  479 bits (1235), Expect = e-171
 Identities = 122/358 (34%), Positives = 199/358 (55%), Gaps = 16/358 (4%)

Query: 9   PIVRVQSLSESGSTDIPDRYVKPPAERPVLPNSRI-NGDDEKINIPIINLAGLDGGDENA 67
            + RV+SL++SG   IP  Y++P  E   + +  +    ++   +P I+L  ++  DE  
Sbjct: 3   AVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKI 62

Query: 68  RREILGQISAACREWGFFQVVNHGVRHELMDDARENWRQFFHSPMEVKQAYGN--SPKTY 125
           R   + ++  A  +WG   ++NHG+  +LM+  ++   +FF   +E K+ Y N  +    
Sbjct: 63  RENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKI 122

Query: 126 EGYGSRLGVEKGAILDWSDYYFLHYRPCSLKDFNKWPATPASCREVIDEYCKELVRLSGR 185
           +GYGS+L       L+W DY+F    P   +D + WP TP+   E   EY K L  L+ +
Sbjct: 123 QGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATK 182

Query: 186 LMKVLSINLGISEDRLQNAFGG-DNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLL 244
           + K LS+ LG+  DRL+   GG + +   +++N+YPKCPQP+L LG+ +H+D   LT +L
Sbjct: 183 VFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL 242

Query: 245 PDHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSL 304
            +  V GLQ+     W+T K    + +++IGD +++LSN  YKS+ HR  VN    R+S 
Sbjct: 243 HN-MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISW 301

Query: 305 AFFYNPKSD-IPIEPVKELVTEESPSLYPPMTFDEY---RLFIRTRGPKGKSQVESMK 358
           A F  P  D I ++P+ E+V+ ESP+ +PP TF ++   +LF       GK Q E + 
Sbjct: 302 AVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLF-------GKEQEELVS 352
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query361
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 94.02
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 91.9
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 88.24
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 83.78
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 81.38
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=1.6e-84  Score=626.33  Aligned_cols=342  Identities=34%  Similarity=0.659  Sum_probs=302.2

Q ss_pred             cccchHHHHhcCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCcceEeCCCCCCCCHHHHHHHHHHHHHHHhhcceEE
Q 018097            9 PIVRVQSLSESGSTDIPDRYVKPPAERPVLPNS--RINGDDEKINIPIINLAGLDGGDENARREILGQISAACREWGFFQ   86 (361)
Q Consensus         9 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~   86 (361)
                      +.++||+|+++++++||++|++|++++|.....  ..+ .....+||||||+.+.++++++|.+++++|.+||++|||||
T Consensus         3 ~~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~-~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~   81 (356)
T 1gp6_A            3 AVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEK-KEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMH   81 (356)
T ss_dssp             CCCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHH-CCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEE
T ss_pred             CcccHHHHHhcCCCCCCHHhcCCchhcccccccccccc-cccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEE
Confidence            346799999999999999999998888764210  000 00123699999999987788888999999999999999999


Q ss_pred             EEeCCCCHHHHHHHHHHHHHhcCCCHHHHhhhcCCCC--CcccccCCCCccCCcccCccccccccccCCCccCCCCCCCC
Q 018097           87 VVNHGVRHELMDDARENWRQFFHSPMEVKQAYGNSPK--TYEGYGSRLGVEKGAILDWSDYYFLHYRPCSLKDFNKWPAT  164 (361)
Q Consensus        87 l~nhGi~~~l~~~~~~~~~~fF~lP~eeK~~~~~~~~--~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~wP~~  164 (361)
                      |+||||+.++++++++.+++||+||.|+|+++.....  .++||+........+..||+|+|.+...|......|.||..
T Consensus        82 v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~  161 (356)
T 1gp6_A           82 LINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKT  161 (356)
T ss_dssp             EESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCS
T ss_pred             EeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCc
Confidence            9999999999999999999999999999999986654  58999876554455678999999876655443456899999


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHhHHhcCCCHHHHHHhhCCC-CCceeEEeecCCCCCCCCCCccccCccCCCCceEE
Q 018097          165 PASCREVIDEYCKELVRLSGRLMKVLSINLGISEDRLQNAFGGD-NIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLL  243 (361)
Q Consensus       165 ~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~~-~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL  243 (361)
                      +++|++.+++|+++|.+|+.+||++|+++||+++++|.+.+... ...+.||+||||||++++..+|+++|||+|+||||
T Consensus       162 ~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL  241 (356)
T 1gp6_A          162 PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI  241 (356)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEE
T ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEE
Confidence            99999999999999999999999999999999999999988620 13468999999999999999999999999999999


Q ss_pred             ecCCCCCCceeecCCeEEEecCCCCeEEEEeCchhhhhhcCccccccceeccCCCCCeeEEEEeecCCCCc-ceecCccc
Q 018097          244 LPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFYNPKSDI-PIEPVKEL  322 (361)
Q Consensus       244 ~~q~~~~GLqV~~~g~W~~V~p~pg~lvVnvGd~L~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~P~~d~-~i~pl~~~  322 (361)
                      + ||+++||||+++|+|++|+|+||++||||||+||+||||+|||+.|||++++.++|||++||++|+.|+ +|.|++++
T Consensus       242 ~-qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~  320 (356)
T 1gp6_A          242 L-HNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEM  320 (356)
T ss_dssp             E-ECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGG
T ss_pred             E-EcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhh
Confidence            9 889999999999999999999999999999999999999999999999999889999999999999999 99999999


Q ss_pred             cCCCCCCCCCCccHHHHHHHHHhcCCCCCc
Q 018097          323 VTEESPSLYPPMTFDEYRLFIRTRGPKGKS  352 (361)
Q Consensus       323 v~~~~p~~y~~~~~~ey~~~~~~~~~~~~~  352 (361)
                      +++++|++|+++|++||+..++.++++++.
T Consensus       321 ~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~  350 (356)
T 1gp6_A          321 VSVESPAKFPPRTFAQHIEHKLFGKEQEEL  350 (356)
T ss_dssp             CCSSSCCSSCCEEHHHHHHHHHHHHHHHHC
T ss_pred             cCCCCCccCCCccHHHHHHHHHHhccCcch
Confidence            999999999999999999998877665543
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 361
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 3e-90
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 2e-74
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 5e-57
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 4e-53
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  272 bits (697), Expect = 3e-90
 Identities = 120/355 (33%), Positives = 196/355 (55%), Gaps = 16/355 (4%)

Query: 9   PIVRVQSLSESGSTDIPDRYVKPPAERPVLPNSRING-DDEKINIPIINLAGLDGGDENA 67
            + RV+SL++SG   IP  Y++P  E   + +  +    ++   +P I+L  ++  DE  
Sbjct: 2   AVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKI 61

Query: 68  RREILGQISAACREWGFFQVVNHGVRHELMDDARENWRQFFHSPMEVKQAYGN--SPKTY 125
           R   + ++  A  +WG   ++NHG+  +LM+  ++   +FF   +E K+ Y N  +    
Sbjct: 62  RENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKI 121

Query: 126 EGYGSRLGVEKGAILDWSDYYFLHYRPCSLKDFNKWPATPASCREVIDEYCKELVRLSGR 185
           +GYGS+L       L+W DY+F    P   +D + WP TP+   E   EY K L  L+ +
Sbjct: 122 QGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATK 181

Query: 186 LMKVLSINLGISEDRLQNAFG-GDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLL 244
           + K LS+ LG+  DRL+   G  + +   +++N+YPKCPQP+L LG+ +H+D   LT +L
Sbjct: 182 VFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL 241

Query: 245 PDHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSL 304
            +    GLQ+     W+T K    + +++IGD +++LSN  YKS+ HR  VN    R+S 
Sbjct: 242 HNMV-PGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISW 300

Query: 305 AFFYNPKSD-IPIEPVKELVTEESPSLYPPMTFDEY---RLFIRTRGPKGKSQVE 355
           A F  P  D I ++P+ E+V+ ESP+ +PP TF ++   +LF       GK Q E
Sbjct: 301 AVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLF-------GKEQEE 348
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query361
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 88.36
d2fdia1200 Alkylated DNA repair protein AlkB {Escherichia col 86.1
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2e-81  Score=602.46  Aligned_cols=335  Identities=34%  Similarity=0.678  Sum_probs=295.7

Q ss_pred             ccchHHHHhcCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCcceEeCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEE
Q 018097           10 IVRVQSLSESGSTDIPDRYVKPPAERPVLPNS-RINGDDEKINIPIINLAGLDGGDENARREILGQISAACREWGFFQVV   88 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~   88 (361)
                      ..+|++|+++|+++||++||+|++++|.+... -........+||||||+.+.++|++.|++++++|.+||+++|||||+
T Consensus         3 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~   82 (349)
T d1gp6a_           3 VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI   82 (349)
T ss_dssp             CCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             CcchHHHHhCCCccCCHhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEE
Confidence            46899999999999999999999999876210 00013445689999999999999999999999999999999999999


Q ss_pred             eCCCCHHHHHHHHHHHHHhcCCCHHHHhhhcCCCC--CcccccCCCCccCCcccCccccccccccCCCccCCCCCCCCCh
Q 018097           89 NHGVRHELMDDARENWRQFFHSPMEVKQAYGNSPK--TYEGYGSRLGVEKGAILDWSDYYFLHYRPCSLKDFNKWPATPA  166 (361)
Q Consensus        89 nhGi~~~l~~~~~~~~~~fF~lP~eeK~~~~~~~~--~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~wP~~~~  166 (361)
                      ||||+.++++++++++++||+||.|+|+++.....  .+.||+...........+|.+.+.....+......|.||..++
T Consensus        83 nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp~~~~  162 (349)
T d1gp6a_          83 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPS  162 (349)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSST
T ss_pred             ccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhcccccccccccccccccccc
Confidence            99999999999999999999999999999875432  2556665555455566777777655555555556789999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhHHhcCCCHHHHHHhhCC-CCCceeEEeecCCCCCCCCCCccccCccCCCCceEEec
Q 018097          167 SCREVIDEYCKELVRLSGRLMKVLSINLGISEDRLQNAFGG-DNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLP  245 (361)
Q Consensus       167 ~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~-~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~~  245 (361)
                      .|++.+.+|+++|.+|+.+|+++++++||+++++|.+.+.. ....+.||++||||++.++..+|+++|||+|+||||+ 
T Consensus       163 ~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~-  241 (349)
T d1gp6a_         163 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL-  241 (349)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEE-
T ss_pred             hHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeecccccccchhhccccccCCCCcceEEEe-
Confidence            99999999999999999999999999999999999988754 2244689999999999999999999999999999999 


Q ss_pred             CCCCCCceeecCCeEEEecCCCCeEEEEeCchhhhhhcCccccccceeccCCCCCeeEEEEeecCCCCcce-ecCccccC
Q 018097          246 DHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFYNPKSDIPI-EPVKELVT  324 (361)
Q Consensus       246 q~~~~GLqV~~~g~W~~V~p~pg~lvVnvGd~L~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~P~~d~~i-~pl~~~v~  324 (361)
                      |+.++||||+++|+|++|+|.+|++|||+||+||+||||+|+||+|||+++++++|||++||++|+.|++| +|+++|++
T Consensus       242 q~~~~GLqv~~~g~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~~~v~  321 (349)
T d1gp6a_         242 HNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVS  321 (349)
T ss_dssp             ECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCC
T ss_pred             ccCCcceeeecCCceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCHHHcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999865 89999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHh
Q 018097          325 EESPSLYPPMTFDEYRLFIRT  345 (361)
Q Consensus       325 ~~~p~~y~~~~~~ey~~~~~~  345 (361)
                      +++|++|+++|++||++.++.
T Consensus       322 ~~~p~~y~~~t~~e~~~~rl~  342 (349)
T d1gp6a_         322 VESPAKFPPRTFAQHIEHKLF  342 (349)
T ss_dssp             SSSCCSSCCEEHHHHHHHHHH
T ss_pred             CCCCCCCCCccHHHHHHHHHh
Confidence            999999999999999998763
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure