Citrus Sinensis ID: 018158
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 360 | 2.2.26 [Sep-21-2011] | |||||||
| Q7XWU3 | 360 | Probable cinnamyl alcohol | yes | no | 0.991 | 0.991 | 0.706 | 1e-151 | |
| P42734 | 360 | Probable cinnamyl alcohol | yes | no | 0.961 | 0.961 | 0.580 | 1e-114 | |
| Q9SJ25 | 376 | Cinnamyl alcohol dehydrog | no | no | 0.947 | 0.906 | 0.556 | 1e-108 | |
| Q9SJ10 | 375 | Cinnamyl alcohol dehydrog | no | no | 0.947 | 0.909 | 0.549 | 1e-108 | |
| Q9ZRF1 | 359 | Probable mannitol dehydro | N/A | no | 0.961 | 0.963 | 0.566 | 1e-108 | |
| P93257 | 361 | Probable mannitol dehydro | N/A | no | 0.980 | 0.977 | 0.540 | 1e-106 | |
| Q2KNL6 | 360 | Geraniol dehydrogenase 1 | N/A | no | 0.961 | 0.961 | 0.545 | 1e-105 | |
| P42754 | 337 | Mannitol dehydrogenase (F | N/A | no | 0.916 | 0.979 | 0.572 | 1e-105 | |
| Q43137 | 354 | Probable mannitol dehydro | N/A | no | 0.955 | 0.971 | 0.564 | 1e-104 | |
| Q38707 | 365 | Mannitol dehydrogenase OS | N/A | no | 0.991 | 0.978 | 0.513 | 1e-103 |
| >sp|Q7XWU3|CADH6_ORYSJ Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CAD6 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 533 bits (1372), Expect = e-151, Method: Compositional matrix adjust.
Identities = 253/358 (70%), Positives = 310/358 (86%), Gaps = 1/358 (0%)
Query: 3 QTTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI 62
+ TPNHTQ+V GWAA D SGKI P++FKRRENGV+DVTIK+ YCG+CHTD+H + NDWGI
Sbjct: 2 EVTPNHTQTVSGWAAMDESGKIVPFVFKRRENGVDDVTIKVKYCGMCHTDLHFIHNDWGI 61
Query: 63 TMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFT 122
TMYPVVPGHEITG++TKVG+NV FKVGDR VGC+AA+C++CE C+ S+ENYCDK+ T
Sbjct: 62 TMYPVVPGHEITGVVTKVGTNVAGFKVGDRVGVGCIAASCLDCEHCRRSEENYCDKVALT 121
Query: 123 YNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDS 182
YNGIFWDGSITYGGYS MLVA RFVV +P+ + +DAAAPLLCAGITV+ PMK + ++ +
Sbjct: 122 YNGIFWDGSITYGGYSGMLVAHKRFVVRIPDTLPLDAAAPLLCAGITVYSPMKQHGMLQA 181
Query: 183 -PAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ 241
A +R+G+VGLGGLGHVAVKFGKAFG HVTVISTSP+KE+EA+E L AD F++ST+ Q
Sbjct: 182 DAAGRRLGVVGLGGLGHVAVKFGKAFGLHVTVISTSPAKEREARENLKADNFVVSTDQKQ 241
Query: 242 MQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKG 301
MQA R+LD+I+DTV+A HSLGPILELLKVNG L +VGAPE P ELPSFPLIFGKR+V G
Sbjct: 242 MQAMTRSLDYIIDTVAATHSLGPILELLKVNGKLVLVGAPEKPVELPSFPLIFGKRTVSG 301
Query: 302 SMTGGMRETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIAGGAR 359
SMTGGM+ETQEMM++CG++NITC+IE++ D+IN+AL RLARNDVRYRFVI++ G ++
Sbjct: 302 SMTGGMKETQEMMDICGEHNITCDIEIVSTDRINDALARLARNDVRYRFVINVGGDSK 359
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Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol. Oryza sativa subsp. japonica (taxid: 39947) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 9EC: 5 |
| >sp|P42734|CADH9_ARATH Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 413 bits (1061), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/348 (58%), Positives = 258/348 (74%), Gaps = 2/348 (0%)
Query: 8 HTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPV 67
H V GW A D SG ++P+ F RR+NG NDVT+KIL+CG+CHTD+H +KNDWG + YPV
Sbjct: 9 HPNKVFGWGARDKSGVLSPFHFSRRDNGENDVTVKILFCGVCHTDLHTIKNDWGYSYYPV 68
Query: 68 VPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIF 127
VPGHEI GI TKVG NV FK GDR VG ++ +C CE C ENYC ++ FTYN I
Sbjct: 69 VPGHEIVGIATKVGKNVTKFKEGDRVGVGVISGSCQSCESCDQDLENYCPQMSFTYNAIG 128
Query: 128 WDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKR 187
DG+ YGGYSE +V D RFV+ PEN+ D+ APLLCAGITV+ PMK + + A K
Sbjct: 129 SDGTKNYGGYSENIVVDQRFVLRFPENLPSDSGAPLLCAGITVYSPMKYYGMTE--AGKH 186
Query: 188 IGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKR 247
+G+ GLGGLGHVAVK GKAFG VTVIS+S +K +EA LGAD F+++T+ +M+A
Sbjct: 187 LGVAGLGGLGHVAVKIGKAFGLKVTVISSSSTKAEEAINHLGADSFLVTTDPQKMKAAIG 246
Query: 248 TLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGM 307
T+D+I+DT+SA H+L P+L LLKVNG L +G PE P ELP FPL+ G++ V GS GGM
Sbjct: 247 TMDYIIDTISAVHALYPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRKMVGGSDVGGM 306
Query: 308 RETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIA 355
+ETQEM++ C K+NIT +IE+IK D+IN A++RLA++DVRYRFVID+A
Sbjct: 307 KETQEMLDFCAKHNITADIELIKMDEINTAMERLAKSDVRYRFVIDVA 354
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Involved in lignin biosynthesis. May catalyze the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 9 EC: 5 |
| >sp|Q9SJ25|CADH2_ARATH Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis thaliana GN=CAD2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/343 (55%), Positives = 249/343 (72%), Gaps = 2/343 (0%)
Query: 14 GWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEI 73
GWAA+D SG ++P+ F RRENG NDVT+KIL+CG+CH+D+H +KN WG + YP++PGHEI
Sbjct: 9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEI 68
Query: 74 TGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDG-SI 132
GI TKVG NV FK GDR VG + +C CE C ENYC K+ FTYN DG S
Sbjct: 69 VGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTSR 128
Query: 133 TYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVG 192
GGYS+++V D+RFV+ +P+ + D+ APLLCAGITV+ PMK + K R+G+ G
Sbjct: 129 NQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGK-RLGVNG 187
Query: 193 LGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFI 252
LGGLGH+AVK GKAFG VTVIS S KE+EA + LGAD F+++T++ +M+ T+DFI
Sbjct: 188 LGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFI 247
Query: 253 LDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQE 312
+DTVSA+H+L P+ LLKVNG L +G PE P +LP F L+ G++ V GS GGM+ETQE
Sbjct: 248 IDTVSAEHALLPLFSLLKVNGKLVALGLPEKPLDLPIFSLVLGRKMVGGSQIGGMKETQE 307
Query: 313 MMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIA 355
M+ C K+ I +IE+IK IN A+DRLA++DVRYRFVID+A
Sbjct: 308 MLEFCAKHKIVSDIELIKMSDINSAMDRLAKSDVRYRFVIDVA 350
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Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH-dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 9 EC: 5 |
| >sp|Q9SJ10|CADH3_ARATH Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis thaliana GN=CAD3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/342 (54%), Positives = 248/342 (72%), Gaps = 1/342 (0%)
Query: 14 GWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEI 73
GWAA+D SG ++P+ F RRENG NDVT+KIL+CG+CH+D+H +KN WG + YP++PGHEI
Sbjct: 9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEI 68
Query: 74 TGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSIT 133
GI TKVG NV FK GDR VG + +C CE C ENYC K+ FTYN DG+
Sbjct: 69 VGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRN 128
Query: 134 YGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL 193
GGYS+++V D+RFV+ +P+ + D+ APLLCAGITV+ PMK + KR+G+ GL
Sbjct: 129 QGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESG-KRLGVNGL 187
Query: 194 GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFIL 253
GGLGH+AVK GKAFG VTVIS S KE+EA + LGAD F+++T++ +M+ T+DFI+
Sbjct: 188 GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFII 247
Query: 254 DTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEM 313
DTVSA+H+L P+ LLKV+G L +G E P +LP FPL+ G++ V GS GGM+ETQEM
Sbjct: 248 DTVSAEHALLPLFSLLKVSGKLVALGLLEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEM 307
Query: 314 MNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIA 355
+ C K+ I +IE+IK IN A+DRL ++DVRYRFVID+A
Sbjct: 308 LEFCAKHKIVSDIELIKMSDINSAMDRLVKSDVRYRFVIDVA 349
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Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH-dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 9 EC: 5 |
| >sp|Q9ZRF1|MTDH_FRAAN Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1 | Back alignment and function description |
|---|
Score = 390 bits (1003), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/348 (56%), Positives = 251/348 (72%), Gaps = 2/348 (0%)
Query: 7 NHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYP 66
H + GWAA D SG ++P+ F RRE G DVT K+LYCGICH+D+H VKN+WG + YP
Sbjct: 6 EHRKKASGWAARDSSGVLSPFNFYRRETGEKDVTFKVLYCGICHSDLHMVKNEWGFSTYP 65
Query: 67 VVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGI 126
+VPGHEI G +T+VGS V+ FKVGDR VGC+ +C CE C D ENYC K TY
Sbjct: 66 LVPGHEIVGEVTEVGSKVQKFKVGDRVGVGCIVGSCRSCENCTDHLENYCPKQILTYGAK 125
Query: 127 FWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKK 186
++DGS TYGGYS+++VAD F+V +P+N+ +D AAPLLCAGIT + P++ L D P
Sbjct: 126 YYDGSTTYGGYSDIMVADEHFIVRIPDNLPLDGAAPLLCAGITTYSPLRYFGL-DKPGMH 184
Query: 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGK 246
+VGLGGLGHVAVKF KA G VTVISTSP KE+EA + LGAD F++S + QMQA
Sbjct: 185 VG-VVGLGGLGHVAVKFAKAMGVKVTVISTSPKKEEEALKHLGADSFLVSRDQDQMQAAI 243
Query: 247 RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGG 306
T+D I+DTVSA+H L P++ LL +G L +VGAPE P ELP FPL+ G++ V GS GG
Sbjct: 244 GTMDGIIDTVSAQHPLLPLIGLLNSHGKLVMVGAPEKPLELPVFPLLMGRKMVAGSGIGG 303
Query: 307 MRETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDI 354
M+ETQEM++ ++NIT +IEVI D +N A++RL + DVRYRFVIDI
Sbjct: 304 MKETQEMIDFAARHNITADIEVIPIDYLNTAMERLVKADVRYRFVIDI 351
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Oxidizes mannitol to mannose. Provides the initial step by which translocated mannitol is committed to central metabolism and, by regulating mannitol pool size, is important in regulating salt tolerance at the cellular level. Fragaria ananassa (taxid: 3747) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 5 |
| >sp|P93257|MTDH_MESCR Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/357 (54%), Positives = 258/357 (72%), Gaps = 4/357 (1%)
Query: 1 MAQTTPN--HTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKN 58
MA + P H Q GWAA D SG ++P F RR G DVT K+LYCGICH+D+H++KN
Sbjct: 1 MANSAPENVHPQKAFGWAARDTSGTLSPLKFSRRATGEQDVTFKVLYCGICHSDLHYIKN 60
Query: 59 DWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDK 118
+WG +YP +PGHEI G++T+VG+ V+NFKVGD+ VGC+ +C CE C++ ENYC K
Sbjct: 61 EWGNAVYPAIPGHEIVGVVTEVGNKVQNFKVGDKVGVGCMVGSCRSCESCENHLENYCPK 120
Query: 119 IQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNN 178
+ TY ++DG++TYGGYS+++V + F V +P+N+A+DA APLLCAG+TV+ P+K
Sbjct: 121 MILTYGSTYYDGTLTYGGYSDIMVVEEHFAVRIPDNMALDATAPLLCAGVTVYSPLKHFE 180
Query: 179 LIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN 238
L D P IG+VGLGGLGH+AVKFGKAFG VTVISTSP+K+ EA LGAD F++S
Sbjct: 181 L-DKPG-LHIGVVGLGGLGHMAVKFGKAFGAKVTVISTSPNKKDEAVNRLGADSFVVSRE 238
Query: 239 AMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRS 298
QMQ+ TLD I+DTVSA H L P+L LLK G + +VG P+ P ELP FPL+ G++
Sbjct: 239 PEQMQSAMGTLDGIIDTVSAAHPLLPLLGLLKSQGKMIMVGVPDKPLELPVFPLLQGRKI 298
Query: 299 VKGSMTGGMRETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIA 355
+ GS GGM+ETQEM++ K++I +IEV+ D +N A++RL + DVRYRFVID+A
Sbjct: 299 LAGSCIGGMKETQEMIDFAAKHDIKSDIEVVPMDYVNTAMERLLKGDVRYRFVIDVA 355
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Oxidizes mannitol to mannose. Provides the initial step by which translocated mannitol is committed to central metabolism and, by regulating mannitol pool size, is important in regulating salt tolerance at the cellular level. Mesembryanthemum crystallinum (taxid: 3544) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 5 |
| >sp|Q2KNL6|GEDH1_OCIBA Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/348 (54%), Positives = 248/348 (71%), Gaps = 2/348 (0%)
Query: 7 NHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYP 66
H +GWAA D SG +P+ F RR G DV ++LYCG+CH+D+H VKN+WG+T YP
Sbjct: 8 EHPVKALGWAATDNSGTFSPFNFSRRATGERDVQFRVLYCGVCHSDLHMVKNEWGVTHYP 67
Query: 67 VVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGI 126
+VPGHEI GI+T+VGS V+ K+GD+ VG L +C +C+ C + ENYC K TY
Sbjct: 68 IVPGHEIVGIVTEVGSKVEKVKIGDKVGVGVLVGSCRQCDQCSNDLENYCYKQILTYGAP 127
Query: 127 FWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKK 186
+ DG+I GGYS+++VAD F++ PEN +DA APLLCAGIT + P+K L D P
Sbjct: 128 YLDGTIARGGYSDIMVADEHFIIRWPENFPLDAGAPLLCAGITTYSPLKYFGL-DKPG-L 185
Query: 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGK 246
R+G+ GLGGLGHVAVKF KAFG VTVISTS SK++EA + LG DEF++ST+ QMQA
Sbjct: 186 RVGVNGLGGLGHVAVKFAKAFGTKVTVISTSLSKKEEAMQHLGVDEFVVSTDPQQMQAAV 245
Query: 247 RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGG 306
TLD I+DTVSA H + P+L LLK +G L VVG P+ P +LP FPLI G+R++ GS GG
Sbjct: 246 GTLDGIIDTVSAPHPIVPLLSLLKPHGKLIVVGLPDKPLQLPVFPLIQGRRTIAGSGIGG 305
Query: 307 MRETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDI 354
++ETQEM++ K NI ++EVI D IN A+DRL ++DV+YRFVID+
Sbjct: 306 LKETQEMIDFAAKNNIVADVEVIPIDYINTAMDRLLKSDVKYRFVIDV 353
|
Involved in the production of citral, a mixture of geranial and neral with a strong lemony scent. Reversibly oxidizes geraniol and nerol in equal efficiency. Also active, although at a lower efficiency, with cinnamyl alcohol. Ocimum basilicum (taxid: 39350) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 3 |
| >sp|P42754|MTDH_PETCR Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 380 bits (976), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/332 (57%), Positives = 246/332 (74%), Gaps = 2/332 (0%)
Query: 24 ITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSN 83
++P+ F RR G NDV K+LYCG+CH+D+H VKN+WG+T YP+VPGHEI G +T+VGS
Sbjct: 2 LSPFKFSRRATGDNDVRFKVLYCGVCHSDLHMVKNEWGMTTYPIVPGHEIVGRVTEVGSK 61
Query: 84 VKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVA 143
V+ FKVGD VGCL +C+ CE C D EN C K TY DGSITYGGY++ +VA
Sbjct: 62 VEKFKVGDAVGVGCLVGSCLSCENCDDDSENNCAKQVQTYAFTNVDGSITYGGYADSMVA 121
Query: 144 DYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKF 203
D FV+ PEN+ +D+ APLLCAGIT + P++ + L D P K +VGLGGLGHVAVK
Sbjct: 122 DQHFVLRWPENLPLDSGAPLLCAGITTYSPLRYHGL-DKPGTKVG-VVGLGGLGHVAVKM 179
Query: 204 GKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263
KAFG HVTVISTS SK++EA E LGADEF++S+++ QMQA TL I+DTVSA H +
Sbjct: 180 AKAFGAHVTVISTSESKKQEALEKLGADEFLVSSDSDQMQAATGTLHGIIDTVSALHPVV 239
Query: 264 PILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNIT 323
P+L LLKVNG L +VGAPE P ELP FPL+ G++ + GS GG++ETQEM++ ++NIT
Sbjct: 240 PLLGLLKVNGKLVMVGAPEKPLELPVFPLLMGRKVLAGSNIGGLKETQEMLDFAAQHNIT 299
Query: 324 CNIEVIKPDQINEALDRLARNDVRYRFVIDIA 355
++EVI D +N A++RL ++DVRYRFVID+A
Sbjct: 300 ADVEVIPVDYVNTAMERLVKSDVRYRFVIDVA 331
|
Oxidizes mannitol to mannose. Provides the initial step by which translocated mannitol is committed to central metabolism and, by regulating mannitol pool size, is important in regulating salt tolerance at the cellular level. Petroselinum crispum (taxid: 4043) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 5 |
| >sp|Q43137|MTDH1_STYHU Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 379 bits (974), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/347 (56%), Positives = 258/347 (74%), Gaps = 3/347 (0%)
Query: 9 TQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVV 68
+ GWAA D SG ++P+ F RR+N +DVT+KILYCG+CH+D+H VKNDWG T YPVV
Sbjct: 3 SSKAFGWAAKDASGHLSPFHFTRRQNEADDVTLKILYCGVCHSDLHTVKNDWGFTTYPVV 62
Query: 69 PGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFW 128
PGHEI GI+TKVGSNV FK GDR VG + +C ECE C+ E+YC K FTYN +
Sbjct: 63 PGHEIAGIVTKVGSNVTKFKEGDRVGVGVIVDSCQECECCQQDLESYCPKPVFTYNSPY- 121
Query: 129 DGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRI 188
G+ T GGYS+ +V RFV+ P+N+ +DA APLLCAGITV+ PMK + + K +
Sbjct: 122 KGTRTQGGYSDFVVVHQRFVLQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTE--PGKHL 179
Query: 189 GIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRT 248
G+ GLGGLGHVA+KFGKAFG VTVIS+SP+KE EA ++LGAD F+LS++ +M+A T
Sbjct: 180 GVAGLGGLGHVAIKFGKAFGLKVTVISSSPNKESEAIDVLGADSFLLSSDPEKMKAATGT 239
Query: 249 LDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMR 308
+D+I+DT+SA HSL +L LLK+NG L VG P P +LP FPL+ G++ + GS GG++
Sbjct: 240 MDYIIDTISAVHSLVSLLGLLKLNGKLVTVGLPSKPLQLPIFPLVAGRKLIGGSNFGGLK 299
Query: 309 ETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIA 355
ETQEM++ CGK+NI NIE+IK D+IN A++RL++ DV+YRFVID+A
Sbjct: 300 ETQEMLDFCGKHNIAANIELIKMDEINTAIERLSKADVKYRFVIDVA 346
|
Oxidizes mannitol to mannose. Provides the initial step by which translocated mannitol is committed to central metabolism and, by regulating mannitol pool size, is important in regulating salt tolerance at the cellular level. Stylosanthes humilis (taxid: 35628) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 5 |
| >sp|Q38707|MTDH_APIGR Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1 | Back alignment and function description |
|---|
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/360 (51%), Positives = 256/360 (71%), Gaps = 3/360 (0%)
Query: 1 MAQTTP-NHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKND 59
MA+++ H GWAA D +G ++P+ F RR G DV +K+L+CG+CH+D H + N+
Sbjct: 1 MAKSSEIEHPVKAFGWAARDTTGLLSPFKFSRRATGEKDVRLKVLFCGVCHSDHHMIHNN 60
Query: 60 WGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKI 119
WG T YP+VPGHEI G++T+VGS V+ KVGD +GCL +C CE C D++E++C+
Sbjct: 61 WGFTTYPIVPGHEIVGVVTEVGSKVEKVKVGDNVGIGCLVGSCRSCESCCDNRESHCENT 120
Query: 120 QFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNL 179
TY I++DG++T+GGYS+ +VAD F++ P+N+ +D+ APLLCAGIT + P+K L
Sbjct: 121 IDTYGSIYFDGTMTHGGYSDTMVADEHFILRWPKNLPLDSGAPLLCAGITTYSPLKYYGL 180
Query: 180 IDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239
D P K IG+VGLGGLGHVAVK KAFG VTVI S SK KEA E LGAD F+L+++
Sbjct: 181 -DKPGTK-IGVVGLGGLGHVAVKMAKAFGAQVTVIDISESKRKEALEKLGADSFLLNSDQ 238
Query: 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSV 299
QM+ + +LD I+DTV H L P+ +LLK NG L +VGAPE PFELP F L+ G++ +
Sbjct: 239 EQMKGARSSLDGIIDTVPVNHPLAPLFDLLKPNGKLVMVGAPEKPFELPVFSLLKGRKLL 298
Query: 300 KGSMTGGMRETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIAGGAR 359
G++ GG++ETQEM++ K+NIT ++EVI D +N A++RL ++DVRYRFVIDIA R
Sbjct: 299 GGTINGGIKETQEMLDFAAKHNITADVEVIPMDYVNTAMERLVKSDVRYRFVIDIANTMR 358
|
Oxidizes mannitol to mannose. Provides the initial step by which translocated mannitol is committed to central metabolism and, by regulating mannitol pool size, is important in regulating salt tolerance at the cellular level. Apium graveolens (taxid: 4045) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 5 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 360 | ||||||
| 255539034 | 362 | alcohol dehydrogenase, putative [Ricinus | 0.986 | 0.980 | 0.859 | 1e-178 | |
| 229368450 | 359 | cinnamyl alcohol dehydrogenase 3 [Gossyp | 0.994 | 0.997 | 0.824 | 1e-174 | |
| 225457871 | 360 | PREDICTED: probable cinnamyl alcohol deh | 0.986 | 0.986 | 0.817 | 1e-170 | |
| 258549503 | 360 | putative cinnamyl alcohol dehydrogenase | 0.994 | 0.994 | 0.781 | 1e-168 | |
| 224065751 | 360 | cinnamyl alcohol dehydrogenase-like prot | 0.986 | 0.986 | 0.789 | 1e-165 | |
| 363806976 | 361 | uncharacterized protein LOC100820588 [Gl | 0.991 | 0.988 | 0.765 | 1e-162 | |
| 449437186 | 362 | PREDICTED: probable cinnamyl alcohol deh | 0.983 | 0.977 | 0.769 | 1e-161 | |
| 357438545 | 360 | Cinnamyl alcohol dehydrogenase-related p | 0.991 | 0.991 | 0.765 | 1e-157 | |
| 363807556 | 362 | uncharacterized protein LOC100779140 [Gl | 0.983 | 0.977 | 0.743 | 1e-155 | |
| 115457380 | 360 | Os04g0229100 [Oryza sativa Japonica Grou | 0.991 | 0.991 | 0.706 | 1e-149 |
| >gi|255539034|ref|XP_002510582.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223551283|gb|EEF52769.1| alcohol dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 306/356 (85%), Positives = 330/356 (92%), Gaps = 1/356 (0%)
Query: 1 MAQTTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDW 60
M QTTPNHTQ+V GWAAHD SGKITPYIFKRRENG+NDVTIKILYCGICHTDIHH KNDW
Sbjct: 1 MTQTTPNHTQTVSGWAAHDSSGKITPYIFKRRENGINDVTIKILYCGICHTDIHHAKNDW 60
Query: 61 GITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQ 120
GIT+YPVVPGHEITGIITKVGSNVKNFKVGDRA VGCLAA+C+ CEFC + QENYCD+IQ
Sbjct: 61 GITIYPVVPGHEITGIITKVGSNVKNFKVGDRAGVGCLAASCLNCEFCNNDQENYCDQIQ 120
Query: 121 FTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLI 180
TYNGIFWDGSITYGGYSE LVAD+R+VVH+PE++ MDAAAPLLCAGITVF PMKDN L+
Sbjct: 121 LTYNGIFWDGSITYGGYSEFLVADHRYVVHIPESLPMDAAAPLLCAGITVFSPMKDNKLL 180
Query: 181 DSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240
DSP KK IVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKE LGAD+FI+STN
Sbjct: 181 DSPGKKIG-IVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKERLGADDFIVSTNPE 239
Query: 241 QMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVK 300
QMQ GK+TLD ILDTVSA HSLGPILELLKVNGTL VGAPE PFELPSFPLIFGKRSVK
Sbjct: 240 QMQEGKKTLDLILDTVSANHSLGPILELLKVNGTLVAVGAPEKPFELPSFPLIFGKRSVK 299
Query: 301 GSMTGGMRETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIAG 356
GSMTGG++ETQEMM+VCGK+NITC+IEV+KPD+INE+LDRLARNDVRYRFVIDIAG
Sbjct: 300 GSMTGGIKETQEMMDVCGKHNITCDIEVVKPDKINESLDRLARNDVRYRFVIDIAG 355
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|229368450|gb|ACQ59091.1| cinnamyl alcohol dehydrogenase 3 [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 615 bits (1587), Expect = e-174, Method: Compositional matrix adjust.
Identities = 296/359 (82%), Positives = 331/359 (92%), Gaps = 1/359 (0%)
Query: 1 MAQTTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDW 60
MA TPNHTQ+V GWAA+D SGKI PYIFKRRENGVNDVTI+++YCGICHTD+HHVK+DW
Sbjct: 1 MALETPNHTQTVAGWAAYDSSGKIAPYIFKRRENGVNDVTIQVMYCGICHTDLHHVKDDW 60
Query: 61 GITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQ 120
GITMYPVVPGHEITG+ITKVGSNVKNFK+GDR VGCLAA+C+ECEFCK+SQENYCD+IQ
Sbjct: 61 GITMYPVVPGHEITGVITKVGSNVKNFKLGDRVGVGCLAASCLECEFCKNSQENYCDQIQ 120
Query: 121 FTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLI 180
FTYNGIFWDGSITYGGYSEMLVAD+R+VVHVP+N+ MDAAAPLLCAGITVF PMKD L+
Sbjct: 121 FTYNGIFWDGSITYGGYSEMLVADHRYVVHVPDNLPMDAAAPLLCAGITVFSPMKDCQLL 180
Query: 181 DSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240
+SP KK IVGLGGLGHVAVK KAFGH VTVISTSPSKE EAK+ LGAD F++ST+A
Sbjct: 181 ESPGKKVG-IVGLGGLGHVAVKMAKAFGHQVTVISTSPSKENEAKQRLGADYFLVSTDAK 239
Query: 241 QMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVK 300
QMQ GKRTLD ILDTVSAKHSLGPILELLKVNGTL VVGAP+ P ELPSFPLIFGKR+VK
Sbjct: 240 QMQRGKRTLDVILDTVSAKHSLGPILELLKVNGTLVVVGAPDRPIELPSFPLIFGKRAVK 299
Query: 301 GSMTGGMRETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIAGGAR 359
GSMTGGM+ETQEMM+VCGK+NITC++E+IKPD+IN+ALDRLARNDVRYRFVIDIAG ++
Sbjct: 300 GSMTGGMKETQEMMDVCGKHNITCDVELIKPDKINQALDRLARNDVRYRFVIDIAGTSK 358
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225457871|ref|XP_002269356.1| PREDICTED: probable cinnamyl alcohol dehydrogenase 6 [Vitis vinifera] gi|302142719|emb|CBI19922.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 602 bits (1553), Expect = e-170, Method: Compositional matrix adjust.
Identities = 291/356 (81%), Positives = 321/356 (90%), Gaps = 1/356 (0%)
Query: 1 MAQTTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDW 60
MAQTTPNHTQ+V GWAAHD SGKITPY+FKRRENG NDVTI+ILYCGICHTD+HHV+NDW
Sbjct: 1 MAQTTPNHTQTVSGWAAHDSSGKITPYVFKRRENGPNDVTIEILYCGICHTDLHHVRNDW 60
Query: 61 GITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQ 120
GITMYPVVPGHEITG++TKVG+NV FK GDR VGCLAA+C+ECEFCK SQENYCD+IQ
Sbjct: 61 GITMYPVVPGHEITGVVTKVGTNVTRFKTGDRVGVGCLAASCLECEFCKSSQENYCDQIQ 120
Query: 121 FTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLI 180
FTYNGIFWDGSITYGGYS MLVAD R+VV VPEN+ MDA AP+LCAGITV+ PMKD ++
Sbjct: 121 FTYNGIFWDGSITYGGYSRMLVADQRYVVRVPENLPMDAVAPMLCAGITVYSPMKDTKML 180
Query: 181 DSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240
+SP KK I+GLGGLGHVAVKF KAFG HVT+ISTSPSKEKEAKE LGAD FI+STN
Sbjct: 181 ESPGKKLG-IIGLGGLGHVAVKFAKAFGLHVTIISTSPSKEKEAKERLGADHFIVSTNPK 239
Query: 241 QMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVK 300
QMQAGKR+LDFILDTVSA HSLG LELLKVNGT+ +VGAPE P ELPSFPLIFGKR+VK
Sbjct: 240 QMQAGKRSLDFILDTVSANHSLGHYLELLKVNGTMVIVGAPEKPMELPSFPLIFGKRTVK 299
Query: 301 GSMTGGMRETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIAG 356
GSMTGGM ETQEMM+VCGK+NITC+IEV+KPDQINEAL+RLA NDVRYRFVIDIAG
Sbjct: 300 GSMTGGMNETQEMMDVCGKHNITCDIEVVKPDQINEALERLANNDVRYRFVIDIAG 355
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|258549503|gb|ACV74414.1| putative cinnamyl alcohol dehydrogenase [Camellia sinensis] | Back alignment and taxonomy information |
|---|
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 282/361 (78%), Positives = 317/361 (87%), Gaps = 3/361 (0%)
Query: 1 MAQTTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDW 60
MAQTTPNHTQ+V GWAAHD SGKITPY FKRRENG+NDVTI ILYCGICHTD+HHV+NDW
Sbjct: 1 MAQTTPNHTQTVSGWAAHDSSGKITPYTFKRRENGINDVTIDILYCGICHTDLHHVRNDW 60
Query: 61 GITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQ 120
GITMYPVVPGHEITG+I+KVGSNV FK+GDR VGCLAA+C+ECEFCKDSQENYCD+IQ
Sbjct: 61 GITMYPVVPGHEITGLISKVGSNVSKFKIGDRVGVGCLAASCLECEFCKDSQENYCDQIQ 120
Query: 121 FTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNL- 179
FTYNGIFWDGSITYGGYS+MLVAD R+VVHVPEN+ MDAAAPLLCAG+TVFCP+KDNN+
Sbjct: 121 FTYNGIFWDGSITYGGYSKMLVADQRYVVHVPENLPMDAAAPLLCAGVTVFCPLKDNNML 180
Query: 180 -IDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN 238
+DSP KK + G VAVKFGKAFGHHVTVISTSPSKE EAK LGAD+FI+ST+
Sbjct: 181 ELDSPPKKLGVVGLGGLGH-VAVKFGKAFGHHVTVISTSPSKEDEAKHRLGADDFIVSTD 239
Query: 239 AMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRS 298
QMQA KR+LD ILDTV+AKHSLG LELLKVNGTL +VGAP+ P +LPSFPLIFGKR
Sbjct: 240 LAQMQAKKRSLDLILDTVAAKHSLGSYLELLKVNGTLVIVGAPDKPIDLPSFPLIFGKRV 299
Query: 299 VKGSMTGGMRETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIAGGA 358
VKGSMTG M+ETQEMM+VCGKYNI C+IE P++INEALDRL++NDV+YRFVIDIA
Sbjct: 300 VKGSMTGSMKETQEMMDVCGKYNIKCDIEKTTPNKINEALDRLSKNDVKYRFVIDIASAD 359
Query: 359 R 359
+
Sbjct: 360 K 360
|
Source: Camellia sinensis Species: Camellia sinensis Genus: Camellia Family: Theaceae Order: Ericales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224065751|ref|XP_002301953.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] gi|118488352|gb|ABK95994.1| unknown [Populus trichocarpa] gi|222843679|gb|EEE81226.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 281/356 (78%), Positives = 320/356 (89%), Gaps = 1/356 (0%)
Query: 1 MAQTTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDW 60
MAQTTPNHTQ+V GWAA D SGK+ PY FKRRENGVNDVTI+I+YCGICHTD+H KNDW
Sbjct: 1 MAQTTPNHTQTVSGWAALDSSGKVVPYTFKRRENGVNDVTIEIMYCGICHTDLHFAKNDW 60
Query: 61 GITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQ 120
GI+MYPVVPGHEITGIITKVGSNV FK+GDR VGCLAA+C+EC+FCK S ENYCD+IQ
Sbjct: 61 GISMYPVVPGHEITGIITKVGSNVNKFKLGDRVGVGCLAASCLECDFCKSSHENYCDQIQ 120
Query: 121 FTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLI 180
TYNGIFWDGSITYGGYS+ LVAD+R+VV +PEN+ MDA APLLCAGITVF KD+NL+
Sbjct: 121 LTYNGIFWDGSITYGGYSKFLVADHRYVVRIPENLPMDATAPLLCAGITVFSAFKDSNLV 180
Query: 181 DSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240
D+P KR+G+VGLGGLGHVAVKFGKAF HHVTVISTSPSKEKEA+E LGAD+FI+STNA
Sbjct: 181 DTPG-KRVGVVGLGGLGHVAVKFGKAFRHHVTVISTSPSKEKEARERLGADDFIVSTNAQ 239
Query: 241 QMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVK 300
++QA +RTLDFI+DTVSAKHSLGP LELLKVNGTL+VV AP+ P ELP+FPLIFGKRSV+
Sbjct: 240 ELQAARRTLDFIVDTVSAKHSLGPTLELLKVNGTLAVVCAPDQPMELPAFPLIFGKRSVR 299
Query: 301 GSMTGGMRETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIAG 356
GSMTG +ETQEM++VCGK+NITC+IE++K D INEA DRLARNDVRYRFVIDIAG
Sbjct: 300 GSMTGSTKETQEMLDVCGKHNITCDIELVKTDNINEAWDRLARNDVRYRFVIDIAG 355
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|363806976|ref|NP_001242314.1| uncharacterized protein LOC100820588 [Glycine max] gi|255641358|gb|ACU20956.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 576 bits (1485), Expect = e-162, Method: Compositional matrix adjust.
Identities = 274/358 (76%), Positives = 319/358 (89%), Gaps = 1/358 (0%)
Query: 1 MAQTTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDW 60
MAQTT NHT +V GWAAHD SGKITPY FKRRENGVNDVTIKILYCGICHTD+H+ KN+W
Sbjct: 1 MAQTTANHTVTVSGWAAHDSSGKITPYTFKRRENGVNDVTIKILYCGICHTDLHYAKNEW 60
Query: 61 GITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQ 120
GITMYPVVPGHEI G++TKVG +VK FK GDR VGCLAA C+ECE CK QENYC+K+Q
Sbjct: 61 GITMYPVVPGHEIIGVVTKVGRDVKGFKEGDRVGVGCLAATCLECEHCKTDQENYCEKLQ 120
Query: 121 FTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLI 180
F YNG+FWDGSITYGGYS++ VADYR+VVH+PEN+AMDAAAPLLCAGITVF P+KD++L+
Sbjct: 121 FVYNGVFWDGSITYGGYSQIFVADYRYVVHIPENLAMDAAAPLLCAGITVFNPLKDHDLV 180
Query: 181 DSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240
SP KK IG+VGLGGLGH+AVKFGKAFGHHVTVISTSPSKE EAK+ LGAD+FI+S+N
Sbjct: 181 ASPGKK-IGVVGLGGLGHIAVKFGKAFGHHVTVISTSPSKEAEAKQRLGADDFIVSSNPK 239
Query: 241 QMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVK 300
Q+QA +R++DFILDTVSA+HSL PILELLKVNGTL +VGAP+ P +LP+FPLIFGKRSVK
Sbjct: 240 QLQAARRSIDFILDTVSAEHSLLPILELLKVNGTLFLVGAPDKPLQLPAFPLIFGKRSVK 299
Query: 301 GSMTGGMRETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIAGGA 358
G + GG++ETQEM+ VC KYNIT +IE+I PD+INEA++RLA+NDVRYRFVIDIA A
Sbjct: 300 GGIIGGIKETQEMLEVCAKYNITSDIELITPDRINEAMERLAKNDVRYRFVIDIANAA 357
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449437186|ref|XP_004136373.1| PREDICTED: probable cinnamyl alcohol dehydrogenase 6-like [Cucumis sativus] gi|449528943|ref|XP_004171461.1| PREDICTED: probable cinnamyl alcohol dehydrogenase 6-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 273/355 (76%), Positives = 320/355 (90%), Gaps = 1/355 (0%)
Query: 1 MAQTTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDW 60
MAQTT NHTQ+V GWAAHD SGKITPY FKRRENG +DVTI+ILYCGICHTDIH+ KN+W
Sbjct: 1 MAQTTSNHTQTVSGWAAHDSSGKITPYTFKRRENGPDDVTIEILYCGICHTDIHYAKNEW 60
Query: 61 GITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQ 120
GITMYPVVPGHE+TG+ITKVG+NVK FK+GD+ VGC+AA C+ CEFCKDSQENYC+ +Q
Sbjct: 61 GITMYPVVPGHEMTGVITKVGNNVKKFKIGDKVGVGCIAATCLNCEFCKDSQENYCENLQ 120
Query: 121 FTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLI 180
F+YNGIFWDGSITYGGYS+M V+D R+VVH+PE++ MDAAAPLLCAGITVF PMKD LI
Sbjct: 121 FSYNGIFWDGSITYGGYSKMFVSDQRYVVHIPESLPMDAAAPLLCAGITVFTPMKDLGLI 180
Query: 181 DSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240
DSP KK +VGLGGLGH+AVKF KAFGHHVTVISTS SKE+EAK+ LGADEFI+S ++
Sbjct: 181 DSPGKKVG-VVGLGGLGHIAVKFAKAFGHHVTVISTSASKEQEAKKRLGADEFIVSKDSQ 239
Query: 241 QMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVK 300
QMQ+ KRTLDFI+DTVSA+H +GPILELLKVNGTLS+VGAPE P +LPSFPLIFGKR+VK
Sbjct: 240 QMQSNKRTLDFIMDTVSAQHCIGPILELLKVNGTLSIVGAPEKPIQLPSFPLIFGKRTVK 299
Query: 301 GSMTGGMRETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIA 355
GS+ GG++ETQ+MM++CGKYNITC+IEV+KP +IN A++RL +NDVRYRFVIDIA
Sbjct: 300 GSIIGGIQETQQMMDLCGKYNITCDIEVVKPHEINHAMERLIQNDVRYRFVIDIA 354
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357438545|ref|XP_003589548.1| Cinnamyl alcohol dehydrogenase-related protein [Medicago truncatula] gi|355478596|gb|AES59799.1| Cinnamyl alcohol dehydrogenase-related protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 274/358 (76%), Positives = 319/358 (89%), Gaps = 1/358 (0%)
Query: 1 MAQTTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDW 60
MA+TTPNHTQ+V GWAAHD SGKITPY FKRRENG DVTIKILYCGICHTD+HH K+DW
Sbjct: 1 MAKTTPNHTQTVSGWAAHDSSGKITPYTFKRRENGGTDVTIKILYCGICHTDVHHAKDDW 60
Query: 61 GITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQ 120
GITMYPVVPGHEITG+ITKVGS+V+ FK GD+ VGCLAA+C++CE+CK QENYC+K+Q
Sbjct: 61 GITMYPVVPGHEITGVITKVGSDVEGFKDGDKVGVGCLAASCLDCEYCKTDQENYCEKLQ 120
Query: 121 FTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLI 180
F YNGIFWDGSITYGGYS+MLV DYR+VVH+PE++ MDAAAPLLCAGITVF P+KD+ L+
Sbjct: 121 FVYNGIFWDGSITYGGYSQMLVVDYRYVVHIPESLPMDAAAPLLCAGITVFSPLKDHGLV 180
Query: 181 DSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240
S A KRIG+VGLGGLGH+AVKFGKAFGHHVTVISTSPSK+ EAKE LGAD+FI+STN
Sbjct: 181 -STAGKRIGVVGLGGLGHMAVKFGKAFGHHVTVISTSPSKQAEAKERLGADDFIISTNPD 239
Query: 241 QMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVK 300
Q+QA KR+LDFILDTVSA H+L PILELLKVNGTL +VGAP+ P +LP+FPLIFGKRS+K
Sbjct: 240 QLQAAKRSLDFILDTVSADHALLPILELLKVNGTLFIVGAPDKPLQLPAFPLIFGKRSIK 299
Query: 301 GSMTGGMRETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIAGGA 358
G + GG++ETQEM++VCGK+NITC+IE+IK D INEA RL +NDVRYRFVIDIA +
Sbjct: 300 GGIIGGIKETQEMLDVCGKHNITCDIELIKADTINEAFQRLLKNDVRYRFVIDIANAS 357
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|363807556|ref|NP_001242404.1| uncharacterized protein LOC100779140 [Glycine max] gi|255636023|gb|ACU18356.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust.
Identities = 264/355 (74%), Positives = 310/355 (87%), Gaps = 1/355 (0%)
Query: 1 MAQTTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDW 60
MA++ NHT SV GWAAHD SGKITPY FKRR+NGVNDVTIKILYCGICHTD+H KN+W
Sbjct: 1 MAESRANHTVSVSGWAAHDSSGKITPYSFKRRQNGVNDVTIKILYCGICHTDLHCAKNEW 60
Query: 61 GITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQ 120
GITMYPVVPGHEI G +TKVG+NVK F GDR VGCLAA+C+EC CK QENYC +Q
Sbjct: 61 GITMYPVVPGHEIIGEVTKVGTNVKGFMEGDRVGVGCLAASCLECHHCKTDQENYCQDLQ 120
Query: 121 FTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLI 180
F YNGIFWDG+ITYGGYS++ VADYR+VVH+P ++ MDAAAPLLCAGITVF P+K+++L+
Sbjct: 121 FVYNGIFWDGTITYGGYSQIFVADYRYVVHIPASLPMDAAAPLLCAGITVFSPLKEHDLV 180
Query: 181 DSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240
+ A KRIG+VGLGGLGH+AVKFGKAFGHHVTVISTSPSKE EAK+ LGAD FILS+N
Sbjct: 181 -ATAGKRIGVVGLGGLGHIAVKFGKAFGHHVTVISTSPSKEPEAKQRLGADHFILSSNPK 239
Query: 241 QMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVK 300
Q+QA +R++DFILDTVSA+HSL PILELLKVNGTL +VGAP+ P +LP+FPLIFGKRSVK
Sbjct: 240 QLQAARRSMDFILDTVSAEHSLSPILELLKVNGTLFLVGAPDKPLQLPAFPLIFGKRSVK 299
Query: 301 GSMTGGMRETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIA 355
G + GG++ETQEM+ VC KYNIT +IE+I PD+INEA++RLA+NDVRYRFVIDIA
Sbjct: 300 GGIIGGIKETQEMLEVCAKYNITSDIELITPDKINEAMERLAKNDVRYRFVIDIA 354
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|115457380|ref|NP_001052290.1| Os04g0229100 [Oryza sativa Japonica Group] gi|75327567|sp|Q7XWU3.2|CADH6_ORYSJ RecName: Full=Probable cinnamyl alcohol dehydrogenase 6; Short=OsCAD6 gi|38344562|emb|CAD39904.2| OSJNBa0065B15.8 [Oryza sativa Japonica Group] gi|113563861|dbj|BAF14204.1| Os04g0229100 [Oryza sativa Japonica Group] gi|116308968|emb|CAH66093.1| H0209A05.10 [Oryza sativa Indica Group] gi|215701095|dbj|BAG92519.1| unnamed protein product [Oryza sativa Japonica Group] gi|215708763|dbj|BAG94032.1| unnamed protein product [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust.
Identities = 253/358 (70%), Positives = 310/358 (86%), Gaps = 1/358 (0%)
Query: 3 QTTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI 62
+ TPNHTQ+V GWAA D SGKI P++FKRRENGV+DVTIK+ YCG+CHTD+H + NDWGI
Sbjct: 2 EVTPNHTQTVSGWAAMDESGKIVPFVFKRRENGVDDVTIKVKYCGMCHTDLHFIHNDWGI 61
Query: 63 TMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFT 122
TMYPVVPGHEITG++TKVG+NV FKVGDR VGC+AA+C++CE C+ S+ENYCDK+ T
Sbjct: 62 TMYPVVPGHEITGVVTKVGTNVAGFKVGDRVGVGCIAASCLDCEHCRRSEENYCDKVALT 121
Query: 123 YNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDS 182
YNGIFWDGSITYGGYS MLVA RFVV +P+ + +DAAAPLLCAGITV+ PMK + ++ +
Sbjct: 122 YNGIFWDGSITYGGYSGMLVAHKRFVVRIPDTLPLDAAAPLLCAGITVYSPMKQHGMLQA 181
Query: 183 -PAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ 241
A +R+G+VGLGGLGHVAVKFGKAFG HVTVISTSP+KE+EA+E L AD F++ST+ Q
Sbjct: 182 DAAGRRLGVVGLGGLGHVAVKFGKAFGLHVTVISTSPAKEREARENLKADNFVVSTDQKQ 241
Query: 242 MQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKG 301
MQA R+LD+I+DTV+A HSLGPILELLKVNG L +VGAPE P ELPSFPLIFGKR+V G
Sbjct: 242 MQAMTRSLDYIIDTVAATHSLGPILELLKVNGKLVLVGAPEKPVELPSFPLIFGKRTVSG 301
Query: 302 SMTGGMRETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIAGGAR 359
SMTGGM+ETQEMM++CG++NITC+IE++ D+IN+AL RLARNDVRYRFVI++ G ++
Sbjct: 302 SMTGGMKETQEMMDICGEHNITCDIEIVSTDRINDALARLARNDVRYRFVINVGGDSK 359
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 360 | ||||||
| TAIR|locus:2136278 | 360 | CAD9 "cinnamyl alcohol dehydro | 0.961 | 0.961 | 0.554 | 1.2e-104 | |
| TAIR|locus:2052516 | 376 | CAD2 "cinnamyl alcohol dehydro | 0.947 | 0.906 | 0.533 | 2.4e-99 | |
| TAIR|locus:2052494 | 375 | CAD3 "cinnamyl alcohol dehydro | 0.947 | 0.909 | 0.526 | 8.2e-99 | |
| TAIR|locus:2005528 | 359 | ELI3-2 "elicitor-activated gen | 0.944 | 0.947 | 0.520 | 7.8e-94 | |
| TAIR|locus:2120968 | 363 | CAD6 "cinnamyl alcohol dehydro | 0.980 | 0.972 | 0.476 | 3e-92 | |
| TAIR|locus:2005527 | 357 | ELI3-1 "elicitor-activated gen | 0.944 | 0.952 | 0.508 | 1.3e-91 | |
| UNIPROTKB|Q0JA75 | 379 | CAD7 "Cinnamyl alcohol dehydro | 0.977 | 0.928 | 0.479 | 1.7e-89 | |
| UNIPROTKB|Q6ZHS4 | 363 | CAD2 "Cinnamyl alcohol dehydro | 0.958 | 0.950 | 0.455 | 5e-83 | |
| TAIR|locus:2090704 | 365 | ATCAD4 [Arabidopsis thaliana ( | 0.958 | 0.945 | 0.432 | 2e-81 | |
| UNIPROTKB|O24562 | 367 | CAD "Probable cinnamyl alcohol | 0.958 | 0.940 | 0.449 | 4.1e-81 |
| TAIR|locus:2136278 CAD9 "cinnamyl alcohol dehydrogenase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1036 (369.7 bits), Expect = 1.2e-104, P = 1.2e-104
Identities = 193/348 (55%), Positives = 247/348 (70%)
Query: 8 HTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPV 67
H V GW A D SG ++P+ F RR+NG NDVT+KIL+CG+CHTD+H +KNDWG + YPV
Sbjct: 9 HPNKVFGWGARDKSGVLSPFHFSRRDNGENDVTVKILFCGVCHTDLHTIKNDWGYSYYPV 68
Query: 68 VPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIF 127
VPGHEI GI TKVG NV FK GDR VG ++ +C CE C ENYC ++ FTYN I
Sbjct: 69 VPGHEIVGIATKVGKNVTKFKEGDRVGVGVISGSCQSCESCDQDLENYCPQMSFTYNAIG 128
Query: 128 WDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKR 187
DG+ YGGYSE +V D RFV+ PEN+ D+ APLLCAGITV+ PMK + + A K
Sbjct: 129 SDGTKNYGGYSENIVVDQRFVLRFPENLPSDSGAPLLCAGITVYSPMKYYGMTE--AGKH 186
Query: 188 XXXXXXXXXXXXAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKR 247
AVK GKAFG VTVIS+S +K +EA LGAD F+++T+ +M+A
Sbjct: 187 LGVAGLGGLGHVAVKIGKAFGLKVTVISSSSTKAEEAINHLGADSFLVTTDPQKMKAAIG 246
Query: 248 TLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGM 307
T+D+I+DT+SA H+L P+L LLKVNG L +G PE P ELP FPL+ G++ V GS GGM
Sbjct: 247 TMDYIIDTISAVHALYPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRKMVGGSDVGGM 306
Query: 308 RETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIA 355
+ETQEM++ C K+NIT +IE+IK D+IN A++RLA++DVRYRFVID+A
Sbjct: 307 KETQEMLDFCAKHNITADIELIKMDEINTAMERLAKSDVRYRFVIDVA 354
|
|
| TAIR|locus:2052516 CAD2 "cinnamyl alcohol dehydrogenase homolog 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 986 (352.1 bits), Expect = 2.4e-99, P = 2.4e-99
Identities = 183/343 (53%), Positives = 238/343 (69%)
Query: 14 GWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEI 73
GWAA+D SG ++P+ F RRENG NDVT+KIL+CG+CH+D+H +KN WG + YP++PGHEI
Sbjct: 9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEI 68
Query: 74 TGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDG-SI 132
GI TKVG NV FK GDR VG + +C CE C ENYC K+ FTYN DG S
Sbjct: 69 VGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTSR 128
Query: 133 TYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXX 192
GGYS+++V D+RFV+ +P+ + D+ APLLCAGITV+ PMK + K R
Sbjct: 129 NQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGK-RLGVNG 187
Query: 193 XXXXXXXAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFI 252
AVK GKAFG VTVIS S KE+EA + LGAD F+++T++ +M+ T+DFI
Sbjct: 188 LGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFI 247
Query: 253 LDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQE 312
+DTVSA+H+L P+ LLKVNG L +G PE P +LP F L+ G++ V GS GGM+ETQE
Sbjct: 248 IDTVSAEHALLPLFSLLKVNGKLVALGLPEKPLDLPIFSLVLGRKMVGGSQIGGMKETQE 307
Query: 313 MMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIA 355
M+ C K+ I +IE+IK IN A+DRLA++DVRYRFVID+A
Sbjct: 308 MLEFCAKHKIVSDIELIKMSDINSAMDRLAKSDVRYRFVIDVA 350
|
|
| TAIR|locus:2052494 CAD3 "cinnamyl alcohol dehydrogenase homolog 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 981 (350.4 bits), Expect = 8.2e-99, P = 8.2e-99
Identities = 180/342 (52%), Positives = 237/342 (69%)
Query: 14 GWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEI 73
GWAA+D SG ++P+ F RRENG NDVT+KIL+CG+CH+D+H +KN WG + YP++PGHEI
Sbjct: 9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEI 68
Query: 74 TGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSIT 133
GI TKVG NV FK GDR VG + +C CE C ENYC K+ FTYN DG+
Sbjct: 69 VGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRN 128
Query: 134 YGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXX 193
GGYS+++V D+RFV+ +P+ + D+ APLLCAGITV+ PMK + K R
Sbjct: 129 QGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGK-RLGVNGL 187
Query: 194 XXXXXXAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFIL 253
AVK GKAFG VTVIS S KE+EA + LGAD F+++T++ +M+ T+DFI+
Sbjct: 188 GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFII 247
Query: 254 DTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEM 313
DTVSA+H+L P+ LLKV+G L +G E P +LP FPL+ G++ V GS GGM+ETQEM
Sbjct: 248 DTVSAEHALLPLFSLLKVSGKLVALGLLEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEM 307
Query: 314 MNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIA 355
+ C K+ I +IE+IK IN A+DRL ++DVRYRFVID+A
Sbjct: 308 LEFCAKHKIVSDIELIKMSDINSAMDRLVKSDVRYRFVIDVA 349
|
|
| TAIR|locus:2005528 ELI3-2 "elicitor-activated gene 3-2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 934 (333.8 bits), Expect = 7.8e-94, P = 7.8e-94
Identities = 178/342 (52%), Positives = 236/342 (69%)
Query: 14 GWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEI 73
G AA D SG ++P+ F RRE G DV K+L+CGICH+D+H VKN+WG++ YP+VPGHEI
Sbjct: 11 GLAAKDNSGVLSPFSFTRRETGEKDVRFKVLFCGICHSDLHMVKNEWGMSTYPLVPGHEI 70
Query: 74 TGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSIT 133
G++T+VG+ V FK G++ VGCL ++C C+ C + ENYC K TY ++D +IT
Sbjct: 71 VGVVTEVGAKVTKFKTGEKVGVGCLVSSCGSCDSCTEGMENYCPKSIQTYGFPYYDNTIT 130
Query: 134 YGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXX 193
YGGYS+ +V + FV+ +P+N+ +DAAAPLLCAGITV+ PMK + L D P
Sbjct: 131 YGGYSDHMVCEEGFVIRIPDNLPLDAAAPLLCAGITVYSPMKYHGL-DKPGM-HIGVVGL 188
Query: 194 XXXXXXAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFIL 253
VKF KA G VTVISTS K EA LGAD F++S + Q++ T+D I+
Sbjct: 189 GGLGHVGVKFAKAMGTKVTVISTSEKKRDEAINRLGADAFLVSRDPKQIKDAMGTMDGII 248
Query: 254 DTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEM 313
DTVSA HSL P+L LLK G L +VGAPE P ELP PLIF ++ V GSM GG++ETQEM
Sbjct: 249 DTVSATHSLLPLLGLLKHKGKLVMVGAPEKPLELPVMPLIFERKMVMGSMIGGIKETQEM 308
Query: 314 MNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIA 355
+++ GK+NIT +IE+I D +N A++RL + DVRYRFVID+A
Sbjct: 309 IDMAGKHNITADIELISADYVNTAMERLEKADVRYRFVIDVA 350
|
|
| TAIR|locus:2120968 CAD6 "cinnamyl alcohol dehydrogenase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 919 (328.6 bits), Expect = 3.0e-92, P = 3.0e-92
Identities = 170/357 (47%), Positives = 243/357 (68%)
Query: 1 MAQTTPNHTQSV--VGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKN 58
M + + QSV GWAA D SG ++P++F RR+ G +V +K+LYCGICH+D+H +KN
Sbjct: 1 MERLSGEKEQSVEAFGWAARDSSGHLSPFVFSRRKTGEEEVRVKVLYCGICHSDLHCLKN 60
Query: 59 DWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDK 118
+W ++YP+VPGHEI G ++++G+ V F +GD+ VGC+ +C CE C++ QENYC K
Sbjct: 61 EWHSSIYPLVPGHEIIGEVSEIGNKVSKFNLGDKVGVGCIVDSCRTCESCREDQENYCTK 120
Query: 119 IQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNN 178
TYNG+ DG+I YGGYS+ +V D R+ V +P + + +AAPLLCAGI+++ PMK
Sbjct: 121 AIATYNGVHHDGTINYGGYSDHIVVDERYAVKIPHTLPLVSAAPLLCAGISMYSPMKYFG 180
Query: 179 LIDSPAKKRXXXXXXXXXXXXAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN 238
L P K V+F KAFG VTV+S++ K K+A + LGAD F++ST+
Sbjct: 181 LT-GP-DKHVGIVGLGGLGHIGVRFAKAFGTKVTVVSSTTGKSKDALDTLGADGFLVSTD 238
Query: 239 AMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRS 298
QM+A T+D I+DTVSA HS+ P++ LLK NG L ++GA E PF++ +F LI G++S
Sbjct: 239 EDQMKAAMGTMDGIIDTVSASHSISPLIGLLKSNGKLVLLGATEKPFDISAFSLILGRKS 298
Query: 299 VKGSMTGGMRETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIA 355
+ GS GGM+ETQEM++ ++ I IE+I D +N A+DRLA+ DVRYRFVIDI+
Sbjct: 299 IAGSGIGGMQETQEMIDFAAEHGIKAEIEIISMDYVNTAMDRLAKGDVRYRFVIDIS 355
|
|
| TAIR|locus:2005527 ELI3-1 "elicitor-activated gene 3-1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 913 (326.5 bits), Expect = 1.3e-91, P = 1.3e-91
Identities = 174/342 (50%), Positives = 231/342 (67%)
Query: 14 GWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEI 73
G AA D SG ++P+ F RR G DV K+L+CGICHTD+ KN+WG+T YP+VPGHEI
Sbjct: 11 GLAAKDESGILSPFSFSRRATGEKDVRFKVLFCGICHTDLSMAKNEWGLTTYPLVPGHEI 70
Query: 74 TGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSIT 133
G++T+VG+ VK F GD+ VG +A +C C+ C D ENYC K+ T +D ++T
Sbjct: 71 VGVVTEVGAKVKKFNAGDKVGVGYMAGSCRSCDSCNDGDENYCPKMILTSGAKNFDDTMT 130
Query: 134 YGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXXXXXX 193
+GGYS+ +V F++ +P+N+ +D AAPLLCAG+TV+ PMK + L D P
Sbjct: 131 HGGYSDHMVCAEDFIIRIPDNLPLDGAAPLLCAGVTVYSPMKYHGL-DKPGM-HIGVVGL 188
Query: 194 XXXXXXAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFIL 253
AVKF KA G VTVISTS K EA LGAD F++S + QM+ T+D I+
Sbjct: 189 GGLGHVAVKFAKAMGTKVTVISTSERKRDEAVTRLGADAFLVSRDPKQMKDAMGTMDGII 248
Query: 254 DTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEM 313
DTVSA H L P+L LLK G L +VGAP P ELP FPLIFG++ V GSM GG++ETQEM
Sbjct: 249 DTVSATHPLLPLLGLLKNKGKLVMVGAPAEPLELPVFPLIFGRKMVVGSMVGGIKETQEM 308
Query: 314 MNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIA 355
+++ GK+NIT +IE+I D +N A++RLA+ DV+YRFVID+A
Sbjct: 309 VDLAGKHNITADIELISADYVNTAMERLAKADVKYRFVIDVA 350
|
|
| UNIPROTKB|Q0JA75 CAD7 "Cinnamyl alcohol dehydrogenase 7" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 893 (319.4 bits), Expect = 1.7e-89, P = 1.7e-89
Identities = 174/363 (47%), Positives = 234/363 (64%)
Query: 6 PNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMY 65
P HT+ VG AAHD SG +TP RR+ G +DV IK+LYCGICH+D+H +KN+W +Y
Sbjct: 17 PQHTRKAVGLAAHDDSGHLTPIRISRRKTGDDDVAIKVLYCGICHSDLHTIKNEWRNAVY 76
Query: 66 PVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDK-IQFTYN 124
PVV GHEITG++T+VG NV FK GD VGC+ C CE C+D ENYC + FTYN
Sbjct: 77 PVVAGHEITGVVTEVGKNVARFKAGDEVGVGCMVNTCGGCESCRDGCENYCSGGVVFTYN 136
Query: 125 GIFWDGSITYGGYSEMLVADYRFVVHVPEN--------IAMDAAAPLLCAGITVFCPMKD 176
+ DG+ TYGGYS+ +V RFVV P + + +D+ APLLCAG+TV+ PM+
Sbjct: 137 SVDRDGTRTYGGYSDAVVVSQRFVVRFPSSAGGGAGAALPLDSGAPLLCAGVTVYAPMRQ 196
Query: 177 NNLIDSPAKKRXXXXXXXXXXXXAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILS 236
+ L + A K AVKF +AFG VTVISTSP K +EA E LGAD FI+S
Sbjct: 197 HGLCE--AGKHVGVVGLGGLGHVAVKFARAFGMRVTVISTSPVKRQEALERLGADGFIVS 254
Query: 237 TNAMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGK 296
TNA +M+A T+ I++T SA S+ L LLK G + +VG PE P ++P+F L+ G
Sbjct: 255 TNASEMKAAMGTMHGIINTASASTSMHSYLALLKPKGKMILVGLPEKPLQIPTFALVGGG 314
Query: 297 RSVKGSMTGGMRETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIAG 356
+ + GS G + ETQEM++ ++ + +IE+I D++N A++RLA+ DVRYRFV+DI
Sbjct: 315 KILAGSCMGSISETQEMIDFAAEHGVAADIELIGADEVNTAMERLAKGDVRYRFVVDIGN 374
Query: 357 GAR 359
R
Sbjct: 375 TLR 377
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| UNIPROTKB|Q6ZHS4 CAD2 "Cinnamyl alcohol dehydrogenase 2" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
Identities = 158/347 (45%), Positives = 220/347 (63%)
Query: 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVP 69
++V GWAA D SG +TPY + R+ G DV +K+LYCGICHTDIH KN G + YP+VP
Sbjct: 8 KTVTGWAARDASGHLTPYNYTLRKTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVP 67
Query: 70 GHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWD 129
GHE+ G + +VG V + GD VG + C EC CK + E YC+K ++YN ++ D
Sbjct: 68 GHEVVGEVVEVGPEVTKYSAGDVVGVGVIVGCCRECHPCKANVEQYCNKRIWSYNDVYTD 127
Query: 130 GSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXX 189
G T GG++ +V D +FVV +P +A + AAPLLCAG+TV+ P+K L+ SP R
Sbjct: 128 GRPTQGGFASAMVVDQKFVVKIPAGLAPEQAAPLLCAGLTVYSPLKHFGLM-SPGL-RGG 185
Query: 190 XXXXXXXXXXAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTL 249
VK K+ GHHVTVIS+S K EA + LGAD +++S++A M A +L
Sbjct: 186 VLGLGGVGHMGVKVAKSMGHHVTVISSSARKRGEAMDDLGADAYLVSSDAAAMAAAGDSL 245
Query: 250 DFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRE 309
D+I+DTV H L P L LLK++G L ++G P S ++ G++++ GS G M E
Sbjct: 246 DYIIDTVPVHHPLEPYLALLKLDGKLILMGVINQPLSFISPMVMLGRKAITGSFIGSMAE 305
Query: 310 TQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIAG 356
T+E++N C +T IEV+K D +N+AL+RL RNDVRYRFV+D+AG
Sbjct: 306 TEEVLNFCVDKGLTSQIEVVKMDYVNQALERLERNDVRYRFVVDVAG 352
|
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| TAIR|locus:2090704 ATCAD4 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
Identities = 150/347 (43%), Positives = 225/347 (64%)
Query: 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVP 69
+ +GWAA DPSG ++PY + R G +DV IK++ CGICHTDIH +KND G++ YP+VP
Sbjct: 9 KKALGWAARDPSGVLSPYSYTLRSTGADDVYIKVICCGICHTDIHQIKNDLGMSNYPMVP 68
Query: 70 GHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWD 129
GHE+ G + +VGS+V F VGD VG + C C+ C E YC+K ++YN ++ D
Sbjct: 69 GHEVVGEVLEVGSDVSKFTVGDVVGVGVVVGCCGSCKPCSSELEQYCNKRIWSYNDVYTD 128
Query: 130 GSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXX 189
G T GG+++ ++ + +FVV +PE +A++ AAPLLCAG+TV+ P+ L+ S K
Sbjct: 129 GKPTQGGFADTMIVNQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLMASGLK--GG 186
Query: 190 XXXXXXXXXXAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTL 249
VK KA GHHVTVIS+S K++EA E LGAD++++S++ +MQ +L
Sbjct: 187 ILGLGGVGHMGVKIAKAMGHHVTVISSSDKKKEEAIEHLGADDYVVSSDPAEMQRLADSL 246
Query: 250 DFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRE 309
D+I+DTV H L P L LK++G L ++G P + + +I G++ + GS G ++E
Sbjct: 247 DYIIDTVPVFHPLDPYLACLKLDGKLILMGVINTPLQFVTPLVILGRKVISGSFIGSIKE 306
Query: 310 TQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIAG 356
T+E++ C + +T IE +K D++N A +RL +NDVRYRFV+D+AG
Sbjct: 307 TEEVLAFCKEKGLTSTIETVKIDELNIAFERLRKNDVRYRFVVDVAG 353
|
|
| UNIPROTKB|O24562 CAD "Probable cinnamyl alcohol dehydrogenase" [Zea mays (taxid:4577)] | Back alignment and assigned GO terms |
|---|
Score = 814 (291.6 bits), Expect = 4.1e-81, P = 4.1e-81
Identities = 156/347 (44%), Positives = 216/347 (62%)
Query: 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVP 69
+ VVGWAA D +G ++PY + R G DV +K+LYCGICHTDIH KN G + YP+VP
Sbjct: 8 RKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVP 67
Query: 70 GHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWD 129
GHE+ G + +VG V + VGD VG + C EC CK + E YC+K ++YN ++ D
Sbjct: 68 GHEVVGEVVEVGPEVAKYGVGDVVGVGVIVGCCRECSPCKANVEQYCNKKIWSYNDVYTD 127
Query: 130 GSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRXX 189
G T GG++ +V D +FVV +P +A + AAPLLCAG+TV+ P+K L + P R
Sbjct: 128 GRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLTN-PGL-RGG 185
Query: 190 XXXXXXXXXXAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTL 249
VK KA GHHVTVIS+S K EA + LGAD +++S++A M A +L
Sbjct: 186 ILGLGGVGHMGVKVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVSSDAAAMAAAADSL 245
Query: 250 DFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRE 309
D+I+DTV H L P L LLK++G L ++G P S ++ G++++ GS G + E
Sbjct: 246 DYIIDTVPVHHPLEPYLALLKLDGKLVLLGVIGEPLSFVSPMVMLGRKAITGSFIGSIDE 305
Query: 310 TQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIAG 356
T E++ C +T IEV+K +NEAL+RL RNDVRYRFV+D+AG
Sbjct: 306 TAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAG 352
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P0A4X1 | ADHC_MYCBO | 1, ., 1, ., 1, ., 2 | 0.4610 | 0.95 | 0.9884 | yes | no |
| P0A4X0 | ADHC_MYCTU | 1, ., 1, ., 1, ., 2 | 0.4610 | 0.95 | 0.9884 | yes | no |
| P42754 | MTDH_PETCR | 1, ., 1, ., 1, ., 2, 5, 5 | 0.5722 | 0.9166 | 0.9792 | N/A | no |
| C0SPA5 | ADHA_BACSU | 1, ., 1, ., 1, ., - | 0.4542 | 0.9555 | 0.9856 | yes | no |
| Q7XWU3 | CADH6_ORYSJ | 1, ., 1, ., 1, ., 1, 9, 5 | 0.7067 | 0.9916 | 0.9916 | yes | no |
| P42734 | CADH9_ARATH | 1, ., 1, ., 1, ., 1, 9, 5 | 0.5804 | 0.9611 | 0.9611 | yes | no |
| P93257 | MTDH_MESCR | 1, ., 1, ., 1, ., 2, 5, 5 | 0.5406 | 0.9805 | 0.9778 | N/A | no |
| P0CH37 | ADHC2_MYCS2 | 1, ., 1, ., 1, ., 2 | 0.4683 | 0.95 | 0.9799 | yes | no |
| Q2KNL6 | GEDH1_OCIBA | 1, ., 1, ., 1, ., 1, 8, 3 | 0.5459 | 0.9611 | 0.9611 | N/A | no |
| Q43137 | MTDH1_STYHU | 1, ., 1, ., 1, ., 2, 5, 5 | 0.5648 | 0.9555 | 0.9717 | N/A | no |
| P0CH36 | ADHC1_MYCS2 | 1, ., 1, ., 1, ., 2 | 0.4683 | 0.95 | 0.9799 | yes | no |
| Q9ZRF1 | MTDH_FRAAN | 1, ., 1, ., 1, ., 2, 5, 5 | 0.5660 | 0.9611 | 0.9637 | N/A | no |
| O82515 | MTDH_MEDSA | 1, ., 1, ., 1, ., 2, 5, 5 | 0.5701 | 0.9416 | 0.9442 | N/A | no |
| Q6V4H0 | 10HGO_CATRO | 1, ., 1, ., 1, ., 3, 2, 4 | 0.5186 | 0.9638 | 0.9638 | N/A | no |
| Q38707 | MTDH_APIGR | 1, ., 1, ., 1, ., 2, 5, 5 | 0.5138 | 0.9916 | 0.9780 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.1.1 | 0.963 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00014356001 | SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (360 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 360 | |||
| cd05283 | 337 | cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA | 0.0 | |
| PLN02586 | 360 | PLN02586, PLN02586, probable cinnamyl alcohol dehy | 1e-177 | |
| PLN02178 | 375 | PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase | 1e-149 | |
| PLN02514 | 357 | PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase | 1e-143 | |
| cd08245 | 330 | cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD | 1e-129 | |
| COG1064 | 339 | COG1064, AdhP, Zn-dependent alcohol dehydrogenases | 1e-123 | |
| cd08297 | 341 | cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA | 5e-84 | |
| cd08296 | 333 | cd08296, CAD_like, Cinnamyl alcohol dehydrogenases | 8e-78 | |
| cd08298 | 329 | cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA | 7e-64 | |
| cd08240 | 350 | cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa | 7e-58 | |
| cd05284 | 340 | cd05284, arabinose_DH_like, D-arabinose dehydrogen | 8e-55 | |
| cd08254 | 338 | cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e | 4e-54 | |
| cd05188 | 271 | cd05188, MDR, Medium chain reductase/dehydrogenase | 3e-50 | |
| cd08259 | 332 | cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD | 3e-44 | |
| COG1063 | 350 | COG1063, Tdh, Threonine dehydrogenase and related | 3e-43 | |
| cd08279 | 363 | cd08279, Zn_ADH_class_III, Class III alcohol dehyd | 5e-38 | |
| cd08263 | 367 | cd08263, Zn_ADH10, Alcohol dehydrogenases of the M | 6e-38 | |
| cd08234 | 334 | cd08234, threonine_DH_like, L-threonine dehydrogen | 1e-37 | |
| PRK09422 | 338 | PRK09422, PRK09422, ethanol-active dehydrogenase/a | 1e-36 | |
| cd08236 | 343 | cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog | 9e-35 | |
| COG1062 | 366 | COG1062, AdhC, Zn-dependent alcohol dehydrogenases | 9e-35 | |
| cd08233 | 351 | cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio | 4e-33 | |
| cd08278 | 365 | cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro | 1e-32 | |
| cd08258 | 306 | cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD | 3e-32 | |
| pfam08240 | 108 | pfam08240, ADH_N, Alcohol dehydrogenase GroES-like | 8e-32 | |
| PRK13771 | 334 | PRK13771, PRK13771, putative alcohol dehydrogenase | 2e-30 | |
| COG0604 | 326 | COG0604, Qor, NADPH:quinone reductase and related | 2e-30 | |
| cd05289 | 309 | cd05289, MDR_like_2, alcohol dehydrogenase and qui | 5e-30 | |
| TIGR02822 | 329 | TIGR02822, adh_fam_2, zinc-binding alcohol dehydro | 2e-29 | |
| cd08277 | 365 | cd08277, liver_alcohol_DH_like, Liver alcohol dehy | 6e-29 | |
| cd08239 | 339 | cd08239, THR_DH_like, L-threonine dehydrogenase (T | 3e-27 | |
| cd08267 | 319 | cd08267, MDR1, Medium chain dehydrogenases/reducta | 1e-26 | |
| cd08231 | 361 | cd08231, MDR_TM0436_like, Hypothetical enzyme TM04 | 6e-26 | |
| cd08260 | 345 | cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD | 1e-25 | |
| cd08266 | 342 | cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t | 3e-25 | |
| cd08235 | 343 | cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas | 8e-25 | |
| cd05278 | 347 | cd05278, FDH_like, Formaldehyde dehydrogenases | 9e-24 | |
| cd08264 | 325 | cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t | 7e-23 | |
| cd05285 | 343 | cd05285, sorbitol_DH, Sorbitol dehydrogenase | 2e-22 | |
| cd08284 | 344 | cd08284, FDH_like_2, Glutathione-dependent formald | 2e-22 | |
| cd05279 | 365 | cd05279, Zn_ADH1, Liver alcohol dehydrogenase and | 3e-22 | |
| cd08249 | 339 | cd08249, enoyl_reductase_like, enoyl_reductase_lik | 4e-22 | |
| cd08281 | 371 | cd08281, liver_ADH_like1, Zinc-dependent alcohol d | 9e-22 | |
| pfam00107 | 131 | pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase | 2e-20 | |
| cd08299 | 373 | cd08299, alcohol_DH_class_I_II_IV, class I, II, IV | 7e-20 | |
| cd08261 | 337 | cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD | 1e-19 | |
| PLN02702 | 364 | PLN02702, PLN02702, L-idonate 5-dehydrogenase | 3e-19 | |
| cd08271 | 325 | cd08271, MDR5, Medium chain dehydrogenases/reducta | 7e-19 | |
| cd08300 | 368 | cd08300, alcohol_DH_class_III, class III alcohol d | 7e-19 | |
| PRK10309 | 347 | PRK10309, PRK10309, galactitol-1-phosphate dehydro | 8e-19 | |
| cd08232 | 339 | cd08232, idonate-5-DH, L-idonate 5-dehydrogenase | 1e-18 | |
| TIGR03989 | 369 | TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa | 2e-17 | |
| cd08301 | 369 | cd08301, alcohol_DH_plants, Plant alcohol dehydrog | 8e-17 | |
| TIGR02818 | 368 | TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat | 1e-16 | |
| cd08276 | 336 | cd08276, MDR7, Medium chain dehydrogenases/reducta | 1e-16 | |
| cd08265 | 384 | cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD | 1e-16 | |
| cd08273 | 331 | cd08273, MDR8, Medium chain dehydrogenases/reducta | 5e-16 | |
| cd08286 | 345 | cd08286, FDH_like_ADH2, formaldehyde dehydrogenase | 8e-16 | |
| TIGR02824 | 325 | TIGR02824, quinone_pig3, putative NAD(P)H quinone | 1e-15 | |
| cd08272 | 326 | cd08272, MDR6, Medium chain dehydrogenases/reducta | 1e-15 | |
| cd08248 | 350 | cd08248, RTN4I1, Human Reticulon 4 Interacting Pro | 2e-15 | |
| cd05281 | 341 | cd05281, TDH, Threonine dehydrogenase | 4e-15 | |
| cd08269 | 312 | cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD | 9e-15 | |
| cd05286 | 320 | cd05286, QOR2, Quinone oxidoreductase (QOR) | 1e-14 | |
| TIGR00692 | 340 | TIGR00692, tdh, L-threonine 3-dehydrogenase | 1e-14 | |
| cd08241 | 323 | cd08241, QOR1, Quinone oxidoreductase (QOR) | 1e-14 | |
| TIGR03366 | 280 | TIGR03366, HpnZ_proposed, putative phosphonate cat | 2e-14 | |
| TIGR03451 | 358 | TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi | 6e-14 | |
| cd08268 | 328 | cd08268, MDR2, Medium chain dehydrogenases/reducta | 2e-13 | |
| PRK09880 | 343 | PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro | 2e-13 | |
| cd08289 | 326 | cd08289, MDR_yhfp_like, Yhfp putative quinone oxid | 6e-13 | |
| cd08285 | 351 | cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd | 1e-12 | |
| TIGR02823 | 323 | TIGR02823, oxido_YhdH, putative quinone oxidoreduc | 2e-12 | |
| cd08242 | 319 | cd08242, MDR_like, Medium chain dehydrogenases/red | 2e-12 | |
| cd05276 | 323 | cd05276, p53_inducible_oxidoreductase, PIG3 p53-in | 4e-12 | |
| cd08253 | 325 | cd08253, zeta_crystallin, Zeta-crystallin with NAD | 5e-12 | |
| TIGR03201 | 349 | TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1 | 5e-12 | |
| PRK05396 | 341 | PRK05396, tdh, L-threonine 3-dehydrogenase; Valida | 5e-12 | |
| cd08283 | 386 | cd08283, FDH_like_1, Glutathione-dependent formald | 6e-12 | |
| cd08256 | 350 | cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD | 8e-12 | |
| cd08262 | 341 | cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD | 2e-11 | |
| cd05195 | 293 | cd05195, enoyl_red, enoyl reductase of polyketide | 3e-11 | |
| cd08247 | 352 | cd08247, AST1_like, AST1 is a cytoplasmic protein | 8e-11 | |
| PRK10083 | 339 | PRK10083, PRK10083, putative oxidoreductase; Provi | 1e-10 | |
| PLN02740 | 381 | PLN02740, PLN02740, Alcohol dehydrogenase-like | 1e-10 | |
| cd05280 | 325 | cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ | 3e-10 | |
| cd08250 | 329 | cd08250, Mgc45594_like, Mgc45594 gene product and | 4e-10 | |
| cd08282 | 375 | cd08282, PFDH_like, Pseudomonas putida aldehyde-di | 5e-10 | |
| cd08252 | 336 | cd08252, AL_MDR, Arginate lyase and other MDR fami | 7e-10 | |
| cd08275 | 337 | cd08275, MDR3, Medium chain dehydrogenases/reducta | 8e-10 | |
| PLN02827 | 378 | PLN02827, PLN02827, Alcohol dehydrogenase-like | 2e-09 | |
| cd08255 | 277 | cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro | 5e-09 | |
| PTZ00354 | 334 | PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi | 1e-08 | |
| cd08230 | 355 | cd08230, glucose_DH, Glucose dehydrogenase | 3e-08 | |
| smart00829 | 287 | smart00829, PKS_ER, Enoylreductase | 3e-08 | |
| cd08287 | 345 | cd08287, FDH_like_ADH3, formaldehyde dehydrogenase | 5e-08 | |
| TIGR02817 | 336 | TIGR02817, adh_fam_1, zinc-binding alcohol dehydro | 6e-08 | |
| cd08251 | 303 | cd08251, polyketide_synthase, polyketide synthase | 9e-08 | |
| TIGR02819 | 393 | TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas | 2e-07 | |
| cd08274 | 350 | cd08274, MDR9, Medium chain dehydrogenases/reducta | 4e-07 | |
| cd08244 | 324 | cd08244, MDR_enoyl_red, Possible enoyl reductase | 7e-07 | |
| cd05282 | 323 | cd05282, ETR_like, 2-enoyl thioester reductase-lik | 2e-06 | |
| cd08246 | 393 | cd08246, crotonyl_coA_red, crotonyl-CoA reductase | 6e-06 | |
| TIGR01751 | 398 | TIGR01751, crot-CoA-red, crotonyl-CoA reductase | 8e-06 | |
| cd08292 | 324 | cd08292, ETR_like_2, 2-enoyl thioester reductase ( | 1e-05 | |
| PRK10754 | 327 | PRK10754, PRK10754, quinone oxidoreductase, NADPH- | 2e-05 | |
| COG2130 | 340 | COG2130, COG2130, Putative NADP-dependent oxidored | 2e-05 | |
| cd08243 | 320 | cd08243, quinone_oxidoreductase_like_1, Quinone ox | 6e-05 | |
| cd08270 | 305 | cd08270, MDR4, Medium chain dehydrogenases/reducta | 1e-04 | |
| cd08290 | 341 | cd08290, ETR, 2-enoyl thioester reductase (ETR) | 2e-04 | |
| PRK06436 | 303 | PRK06436, PRK06436, glycerate dehydrogenase; Provi | 7e-04 | |
| cd12169 | 308 | cd12169, PGDH_like_1, Putative D-3-Phosphoglycerat | 0.001 | |
| cd08288 | 324 | cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu | 0.002 | |
| COG0111 | 324 | COG0111, SerA, Phosphoglycerate dehydrogenase and | 0.003 | |
| pfam02826 | 175 | pfam02826, 2-Hacid_dh_C, D-isomer specific 2-hydro | 0.003 | |
| cd12165 | 314 | cd12165, 2-Hacid_dh_6, Putative D-isomer specific | 0.004 | |
| cd05300 | 313 | cd05300, 2-Hacid_dh_1, Putative D-isomer specific | 0.004 |
| >gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 518 bits (1338), Expect = 0.0
Identities = 188/341 (55%), Positives = 240/341 (70%), Gaps = 4/341 (1%)
Query: 13 VGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHE 72
G+AA D SGK+ P+ F+RR G +DV IKI YCG+CH+D+H ++N+WG T YP+VPGHE
Sbjct: 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHE 60
Query: 73 ITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSI 132
I GI+ VGS V FKVGDR VGC +C CE CK +E YC K TYNG + DG+I
Sbjct: 61 IVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTI 120
Query: 133 TYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVG 192
T GGY++ +V D RFV +PE + AAAPLLCAGITV+ P+K N + KR+G+VG
Sbjct: 121 TQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKRNGV---GPGKRVGVVG 177
Query: 193 LGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFI 252
+GGLGH+AVKF KA G VT S SPSK+++A + LGADEFI + + M+ +LD I
Sbjct: 178 IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALK-LGADEFIATKDPEAMKKAAGSLDLI 236
Query: 253 LDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQE 312
+DTVSA H L P L LLK GTL +VGAPE P +P FPLIFG++SV GS+ GG +ETQE
Sbjct: 237 IDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQE 296
Query: 313 MMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVID 353
M++ ++ I +EVI D INEAL+RL + DVRYRFV+D
Sbjct: 297 MLDFAAEHGIKPWVEVIPMDGINEALERLEKGDVRYRFVLD 337
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 496 bits (1278), Expect = e-177
Identities = 204/349 (58%), Positives = 261/349 (74%), Gaps = 2/349 (0%)
Query: 8 HTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPV 67
H Q GWAA DPSG ++P+ F RRENG DVT+KILYCG+CH+D+H +KN+WG T YP+
Sbjct: 9 HPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPI 68
Query: 68 VPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIF 127
VPGHEI GI+TK+G NVK FK GDR VG + +C CE C ENYC K+ FTYN I
Sbjct: 69 VPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIG 128
Query: 128 WDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKR 187
DG+ YGGYS+M+V D FV+ P+N+ +DA APLLCAGITV+ PMK + + K
Sbjct: 129 HDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTE--PGKH 186
Query: 188 IGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKR 247
+G+ GLGGLGHVAVK GKAFG VTVIS+S +KE EA LGAD F++ST+ +M+A
Sbjct: 187 LGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAAIG 246
Query: 248 TLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGM 307
T+D+I+DTVSA H+LGP+L LLKVNG L +G PE P ELP FPL+ G++ V GS GG+
Sbjct: 247 TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGI 306
Query: 308 RETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIAG 356
+ETQEM++ C K+NIT +IE+I+ D+IN A++RLA++DVRYRFVID+A
Sbjct: 307 KETQEMLDFCAKHNITADIELIRMDEINTAMERLAKSDVRYRFVIDVAN 355
|
Length = 360 |
| >gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 426 bits (1096), Expect = e-149
Identities = 190/342 (55%), Positives = 251/342 (73%), Gaps = 1/342 (0%)
Query: 14 GWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEI 73
GWAA+D SG ++P+ F RRENG NDVT+KIL+CG+CH+D+H +KN WG + YP++PGHEI
Sbjct: 9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEI 68
Query: 74 TGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSIT 133
GI TKVG NV FK GDR VG + +C CE C ENYC K+ FTYN DG+
Sbjct: 69 VGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRN 128
Query: 134 YGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL 193
GGYS+++V D+RFV+ +P+ + D+ APLLCAGITV+ PMK + + KR+G+ GL
Sbjct: 129 QGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKE-SGKRLGVNGL 187
Query: 194 GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFIL 253
GGLGH+AVK GKAFG VTVIS S KE+EA + LGAD F+++T++ +M+ T+DFI+
Sbjct: 188 GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFII 247
Query: 254 DTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEM 313
DTVSA+H+L P+ LLKV+G L +G PE P +LP FPL+ G++ V GS GGM+ETQEM
Sbjct: 248 DTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEM 307
Query: 314 MNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIA 355
+ C K+ I +IE+IK IN A+DRLA++DVRYRFVID+A
Sbjct: 308 LEFCAKHKIVSDIELIKMSDINSAMDRLAKSDVRYRFVIDVA 349
|
Length = 375 |
| >gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 409 bits (1052), Expect = e-143
Identities = 167/347 (48%), Positives = 235/347 (67%), Gaps = 2/347 (0%)
Query: 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVP 69
+ GWAA DPSG ++PY + R+ G DV IK++YCGICHTD+H +KND G++ YP+VP
Sbjct: 8 KKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVP 67
Query: 70 GHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWD 129
GHE+ G + +VGS+V F VGD VG + C EC CK E YC+K ++YN ++ D
Sbjct: 68 GHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTD 127
Query: 130 GSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIG 189
G T GG++ +V D +FVV +PE +A + AAPLLCAG+TV+ P+ L S R G
Sbjct: 128 GKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGL--RGG 185
Query: 190 IVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTL 249
I+GLGG+GH+ VK KA GHHVTVIS+S K +EA E LGAD++++S++A +MQ +L
Sbjct: 186 ILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEAADSL 245
Query: 250 DFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRE 309
D+I+DTV H L P L LLK++G L ++G P + + L+ G++ + GS G M+E
Sbjct: 246 DYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKE 305
Query: 310 TQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIAG 356
T+EM+ C + +T IEV+K D +N A +RL +NDVRYRFV+D+AG
Sbjct: 306 TEEMLEFCKEKGLTSMIEVVKMDYVNTAFERLEKNDVRYRFVVDVAG 352
|
Length = 357 |
| >gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Score = 373 bits (960), Expect = e-129
Identities = 136/341 (39%), Positives = 194/341 (56%), Gaps = 14/341 (4%)
Query: 15 WAA--HDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHE 72
AA H G + P E G +V IKI CG+CHTD+H + DWG + YP+VPGHE
Sbjct: 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHE 60
Query: 73 ITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSI 132
I G + +VG+ V+ KVGDR VG L +C CE+C+ EN C K T G
Sbjct: 61 IVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNT-------GYT 113
Query: 133 TYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVG 192
T GGY+E +VAD + V +P+ + + AAPLLCAGITV+ ++D +R+ ++G
Sbjct: 114 TQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRDAGPRPG---ERVAVLG 170
Query: 193 LGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFI 252
+GGLGH+AV++ +A G I+ SP K + A++ LGADE + S + QA D I
Sbjct: 171 IGGLGHLAVQYARAMGFETVAITRSPDKRELARK-LGADEVVDSGAELDEQAAAGGADVI 229
Query: 253 LDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELP-SFPLIFGKRSVKGSMTGGMRETQ 311
L TV + + L L+ G + +VG PE+P P FPLI ++S+ GS GG + Q
Sbjct: 230 LVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQ 289
Query: 312 EMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVI 352
E ++ + + IE DQ NEA +R+ + DVR+RFV+
Sbjct: 290 EALDFAAEGKVKPMIETFPLDQANEAYERMEKGDVRFRFVL 330
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330 |
| >gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Score = 356 bits (917), Expect = e-123
Identities = 134/345 (38%), Positives = 190/345 (55%), Gaps = 15/345 (4%)
Query: 14 GWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEI 73
+ E G +V IK+ CG+CHTD+H K DW + P++PGHEI
Sbjct: 6 AAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEI 65
Query: 74 TGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSIT 133
G + +VG V KVGDR VG L +C ECE+C+ EN C + T G T
Sbjct: 66 VGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT-------GYTT 118
Query: 134 YGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL 193
GGY+E +V R+VV +PE + + AAPLLCAGIT + +K N+ K + +VG
Sbjct: 119 DGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKKANV---KPGKWVAVVGA 175
Query: 194 GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFIL 253
GGLGH+AV++ KA G V I+ S K + AK+ LGAD I S+++ ++A K D I+
Sbjct: 176 GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-LGADHVINSSDSDALEAVKEIADAII 234
Query: 254 DTVSAKHSLGPILELLKVNGTLSVVGAP--EAPFELPSFPLIFGKRSVKGSMTGGMRETQ 311
DTV +L P L+ L+ GTL +VG P LP+F LI + S+ GS+ G + +
Sbjct: 235 DTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLE 293
Query: 312 EMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDIA 355
E ++ + I I E I D+INEA +R+ + VR R VID++
Sbjct: 294 EALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS 338
|
Length = 339 |
| >gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 258 bits (661), Expect = 5e-84
Identities = 107/341 (31%), Positives = 167/341 (48%), Gaps = 22/341 (6%)
Query: 25 TPYIFKRR---ENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIITKV 80
PY K E G +V +K+ G+CHTD+H DW + P++ GHE G++ V
Sbjct: 12 KPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAV 71
Query: 81 GSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEM 140
G V KVGDR V L AC +CE+C+ E C + + G D G ++E
Sbjct: 72 GPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS--GYTVD-----GTFAEY 124
Query: 141 LVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGG-LGHV 199
+AD R+V +P+ ++ + AAPLLCAG+TV+ +K L + I G GG LGH+
Sbjct: 125 AIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKKAGL---KPGDWVVISGAGGGLGHL 181
Query: 200 AVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN-----AMQMQAGKRTLDFILD 254
V++ KA G V I K + AKE LGAD F+ A++ G ++
Sbjct: 182 GVQYAKAMGLRVIAIDVGDEKLELAKE-LGADAFVDFKKSDDVEAVKELTGGGGAHAVVV 240
Query: 255 TVSAKHSLGPILELLKVNGTLSVVGAPEAPF-ELPSFPLIFGKRSVKGSMTGGMRETQEM 313
T + + L+ L+ GTL VG P F L F L+ ++ GS+ G ++ QE
Sbjct: 241 TAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEA 300
Query: 314 MNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDI 354
+ + + +I+V+ + +NE +++ + R V+D
Sbjct: 301 LEFAARGKVKPHIQVVPLEDLNEVFEKMEEGKIAGRVVVDF 341
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341 |
| >gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 241 bits (618), Expect = 8e-78
Identities = 97/325 (29%), Positives = 157/325 (48%), Gaps = 17/325 (5%)
Query: 32 RENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGD 91
G +V IK+ CG+CH+D + YP VPGHE+ G I VG V +KVGD
Sbjct: 21 PLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80
Query: 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV 151
R VG C C+ C+ +C+ + G+ D GGY+E ++A + +
Sbjct: 81 RVGVGWHGGHCGTCDACRRGDFVHCENGK--VTGVTRD-----GGYAEYMLAPAEALARI 133
Query: 152 PENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAK--KRIGIVGLGGLGHVAVKFGKAFGH 209
P+++ AAPLLCAG+T F N L +S AK + + G+GGLGH+AV++ G
Sbjct: 134 PDDLDAAEAAPLLCAGVTTF-----NALRNSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF 188
Query: 210 HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRT--LDFILDTVSAKHSLGPILE 267
IS K A++ LGA +I ++ +A + IL T ++ ++
Sbjct: 189 RTVAISRGSDKADLARK-LGAHHYIDTSKEDVAEALQELGGAKLILATAPNAKAISALVG 247
Query: 268 LLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIE 327
L G L ++GA P + LI G++S+ G +G ++++ + + + +E
Sbjct: 248 GLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVRPMVE 307
Query: 328 VIKPDQINEALDRLARNDVRYRFVI 352
++ NEA DR+ R+R V+
Sbjct: 308 TFPLEKANEAYDRMMSGKARFRVVL 332
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333 |
| >gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 205 bits (525), Expect = 7e-64
Identities = 99/324 (30%), Positives = 158/324 (48%), Gaps = 20/324 (6%)
Query: 31 RRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVG 90
E G +V IK+ CG+C TD+H V+ D P++PGHEI G + VG V F VG
Sbjct: 24 VPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRFSVG 83
Query: 91 DRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVH 150
DR V L + C EC +C+ +EN CD +FT G GGY+E +VAD RF
Sbjct: 84 DRVGVPWLGSTCGECRYCRSGRENLCDNARFT-------GYTVDGGYAEYMVADERFAYP 136
Query: 151 VPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH 210
+PE+ + AAPLLCAGI + +K L +R+G+ G G H+A++ + G
Sbjct: 137 IPEDYDDEEAAPLLCAGIIGYRALK---LAGLKPGQRLGLYGFGASAHLALQIARYQGAE 193
Query: 211 VTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPILELLK 270
V + S ++ A+E LGAD S + + LD + + L +K
Sbjct: 194 VFAFTRSGEHQELARE-LGADWAGDSDD----LPPE-PLDAAIIFAPVGALVPAALRAVK 247
Query: 271 VNGTLSVVGAPEAPFELPSFP--LIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIEV 328
G + + G + +P+F L++G+++++ ++ +E + + + I +E
Sbjct: 248 KGGRVVLAGIHMSD--IPAFDYELLWGEKTIRSVANLTRQDGEEFLKLAAEIPIKPEVET 305
Query: 329 IKPDQINEALDRLARNDVRYRFVI 352
++ NEAL L +R V+
Sbjct: 306 YPLEEANEALQDLKEGRIRGAAVL 329
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329 |
| >gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase | Back alignment and domain information |
|---|
Score = 190 bits (486), Expect = 7e-58
Identities = 99/341 (29%), Positives = 159/341 (46%), Gaps = 45/341 (13%)
Query: 38 DVTIKILYCGICHTDIH-------------HVKNDWGITMYPVVPGHEITGIITKVGSNV 84
+V +K+ CG+CH+D+H +D G+ P+V GHEI G + VG +
Sbjct: 27 EVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVK-LPLVLGHEIVGEVVAVGPDA 85
Query: 85 KNFKVGDRAAV----GCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEM 140
+ KVGD+ V G C EC C EN C K + GIF D GGY+E
Sbjct: 86 ADVKVGDKVLVYPWIG-----CGECPVCLAGDENLCAKGRA--LGIFQD-----GGYAEY 133
Query: 141 -LVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHV 199
+V R++V P + AA L C+G+T + +K L+ A + + I+G GGLG +
Sbjct: 134 VIVPHSRYLV-DPGGLDPALAATLACSGLTAYSAVK--KLMPLVADEPVVIIGAGGLGLM 190
Query: 200 AVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQ----MQAGKRTLDFILD 254
A+ KA G ++ V+ +K + AK GAD + ++ ++A +D ++D
Sbjct: 191 ALALLKALGPANIIVVDIDEAKLEAAKA-AGADVVVNGSDPDAAKRIIKAAGGGVDAVID 249
Query: 255 TVSAKHSLGPILELLKVNGTLSVVG--APEAPFELPSFPLIFGKRSVKGSMTGGMRETQE 312
V+ + ++L G L +VG EA LP PL +++GS G + E +E
Sbjct: 250 FVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPL--RALTIQGSYVGSLEELRE 307
Query: 313 MMNVCGKYNIT-CNIEVIKPDQINEALDRLARNDVRYRFVI 352
++ + + + +N+ALD L V R V+
Sbjct: 308 LVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVL 348
|
6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350 |
| >gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase | Back alignment and domain information |
|---|
Score = 182 bits (465), Expect = 8e-55
Identities = 102/332 (30%), Positives = 157/332 (47%), Gaps = 31/332 (9%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITM---YPVVPGHEITGIITKVGSNVKNFKVGD 91
G V +++ G+CH+D+H + WG + P GHE G + +VGS V K GD
Sbjct: 24 GPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLKEGD 83
Query: 92 RAAV----GCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSE-MLVADYR 146
V GC C +C+ +ENYC+ N + G T GG++E +LV R
Sbjct: 84 PVVVHPPWGCGT-----CRYCRRGEENYCE------NAR-FPGIGTDGGFAEYLLVPSRR 131
Query: 147 FVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKA 206
V +P + AAPL AG+T + +K P + ++G+GGLGH+AV+ +A
Sbjct: 132 LVK-LPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGST-VVVIGVGGLGHIAVQILRA 189
Query: 207 FGHHVTVISTSPSKE--KEAKELLGADEFILSTNAMQMQ----AGKRTLDFILDTVSAKH 260
TVI+ S+E K A+ LGAD + +++ + + G R D ++D V +
Sbjct: 190 LT-PATVIAVDRSEEALKLAER-LGADHVLNASDDVVEEVRELTGGRGADAVIDFVGSDE 247
Query: 261 SLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKY 320
+L +LL G +VG LP+ L+ + SV GS+ G E E++ +
Sbjct: 248 TLALAAKLLAKGGRYVIVGY-GGHGRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESG 306
Query: 321 NITCNIEVIKPDQINEALDRLARNDVRYRFVI 352
+ I + NEALDRL V R V+
Sbjct: 307 KVKVEITKFPLEDANEALDRLREGRVTGRAVL 338
|
This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340 |
| >gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members | Back alignment and domain information |
|---|
Score = 180 bits (460), Expect = 4e-54
Identities = 98/326 (30%), Positives = 152/326 (46%), Gaps = 16/326 (4%)
Query: 33 ENGVNDVTIKILYCGICHTDIHHVKN-DWGITMYPVVPGHEITGIITKVGSNVKNFKVGD 91
E G +V +K+ G+CH+D+H + +T P+ GHEI G + +VG+ V NFKVGD
Sbjct: 23 EPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKVGD 82
Query: 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV 151
R AV C C C+ + N C GI GG++E +V R +V V
Sbjct: 83 RVAV-PAVIPCGACALCRRGRGNLCLNQGMPGLGI-------DGGFAEYIVVPARALVPV 134
Query: 152 PENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHV 211
P+ + AA A +T + + + P + + ++GLGGLG AV+ KA G V
Sbjct: 135 PDGVPFAQAAVATDAVLTPYHAVVRAGEV-KPGET-VLVIGLGGLGLNAVQIAKAMGAAV 192
Query: 212 TVISTSPSKEKEAKELLGADEFILS---TNAMQMQAGK-RTLDFILDTVSAKHSLGPILE 267
+ K + AKE LGADE + S + + AG D I D V + + +
Sbjct: 193 IAVDIKEEKLELAKE-LGADEVLNSLDDSPKDKKAAGLGGGFDVIFDFVGTQPTFEDAQK 251
Query: 268 LLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIE 327
+K G + VVG + LI + + GS G + E++++ K + +E
Sbjct: 252 AVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDPQVE 311
Query: 328 VIKPDQINEALDRLARNDVRYRFVID 353
D+I E L+RL + V+ R V+
Sbjct: 312 TRPLDEIPEVLERLHKGKVKGRVVLV 337
|
This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338 |
| >gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 169 bits (429), Expect = 3e-50
Identities = 75/288 (26%), Positives = 122/288 (42%), Gaps = 29/288 (10%)
Query: 38 DVTIKILYCGICHTDIHHVKNDWGITM-YPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
+V +++ G+C TD+H + + P++ GHE G++ +VG V KVGDR V
Sbjct: 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVV- 59
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIA 156
C CE C++ G G GG++E +V +V +P+ ++
Sbjct: 60 LPNLGCGTCELCRE-----------LCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLS 108
Query: 157 MDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIG----IVGLGGLGHVAVKFGKAFGHHVT 212
++ AA L T + + + + G ++G GG+G +A + KA G V
Sbjct: 109 LEEAALLPEPLATAY------HALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGARVI 162
Query: 213 VISTSPSKEKEAKELLGADEFILSTN----AMQMQAGKRTLDFILDTVSAKHSLGPILEL 268
V S K + AKE LGAD I G D ++D V +L L L
Sbjct: 163 VTDRSDEKLELAKE-LGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRL 221
Query: 269 LKVNGTLSVVGAPEAPFELPSFPLIFGK-RSVKGSMTGGMRETQEMMN 315
L+ G + VVG L + K ++ GS G + +E ++
Sbjct: 222 LRPGGRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALD 269
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271 |
| >gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 154 bits (392), Expect = 3e-44
Identities = 89/323 (27%), Positives = 148/323 (45%), Gaps = 18/323 (5%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94
G +V IK+ G+C+ D+ K + YP++ GHEI G + +VG V+ FK GDR
Sbjct: 24 GPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGDRVI 83
Query: 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPEN 154
+ C +CE+C +EN C + G GG++E + R +V +P+N
Sbjct: 84 L-YYYIPCGKCEYCLSGEENLCR-----NRAEY--GEEVDGGFAEYVKVPERSLVKLPDN 135
Query: 155 IAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVI 214
++ ++AA C T +K + GG+G A++ KA G V +
Sbjct: 136 VSDESAALAACVVGTAVHALK--RAGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAV 193
Query: 215 STSPSKEKEAKELLGADEFILSTNAMQMQAGKRT-LDFILDTVSAKHSLGPILELLKVNG 273
+ SP K K KE LGAD +++ + K D +++ V ++ L L G
Sbjct: 194 TRSPEKLKILKE-LGAD-YVIDGSKFSEDVKKLGGADVVIELV-GSPTIEESLRSLNKGG 250
Query: 274 TLSVVG--APEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIE-VIK 330
L ++G P+ P L LI + + GS++ + +E + + + I I+ V+
Sbjct: 251 RLVLIGNVTPD-PAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKIKPVIDRVVS 309
Query: 331 PDQINEALDRLARNDVRYRFVID 353
+ INEAL+ L V R V+
Sbjct: 310 LEDINEALEDLKSGKVVGRIVLK 332
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332 |
| >gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 152 bits (387), Expect = 3e-43
Identities = 84/323 (26%), Positives = 134/323 (41%), Gaps = 24/323 (7%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVP-GHEITGIITKVGSNVKNFKVGDRA 93
G DV I++ GIC +D+H + + GHE G + +VG V+ FKVGDR
Sbjct: 24 GPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVGDRV 82
Query: 94 AVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRF-VVHVP 152
V C C +C+ + N C+ F G G GG++E + F + +P
Sbjct: 83 VVEPN-IPCGHCRYCRAGEYNLCENPGFY--GYAGLGGGIDGGFAEYVRVPADFNLAKLP 139
Query: 153 ENIAMDAAA--PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFG-H 209
+ I +AAA L + +VG G +G +A+ K G
Sbjct: 140 DGIDEEAAALTEPLATAYHGH-----AERAAVRPGGTVVVVGAGPIGLLAIALAKLLGAS 194
Query: 210 HVTVISTSPSKEKEAKELLGADEFILST-----NAMQMQAGKRTLDFILDTVSAKHSLGP 264
V V+ SP + + AKE GAD + + + G R D +++ V + +L
Sbjct: 195 VVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEAVGSPPALDQ 254
Query: 265 ILELLKVNGTLSVVGAPEAPFELPSFPLIFGK-RSVKGSMTGGMRET-QEMMNV--CGKY 320
LE L+ GT+ VVG L+ K +++GS+ RE + +++ GK
Sbjct: 255 ALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASGKI 314
Query: 321 NITCNI-EVIKPDQINEALDRLA 342
+ I + D EA + A
Sbjct: 315 DPEKLITHRLPLDDAAEAYELFA 337
|
Length = 350 |
| >gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 139 bits (352), Expect = 5e-38
Identities = 89/356 (25%), Positives = 142/356 (39%), Gaps = 55/356 (15%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94
G +V ++I G+CH+D+H V D P V GHE G++ +VG V K GD
Sbjct: 24 GPGEVLVRIAAAGLCHSDLHVVTGDLPA-PLPAVLGHEGAGVVEEVGPGVTGVKPGDH-V 81
Query: 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGS-------------ITYGGYSEML 141
V AC C +C Q N CD G DG+ G ++E
Sbjct: 82 VLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYT 141
Query: 142 VADYRFVVHVPENIAMDAAAPLLCAGIT----VFCPMKDNNLIDSPAKKRIG----IVGL 193
V VV + ++I +D AA L C T V N A+ R G ++G
Sbjct: 142 VVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVV------NT----ARVRPGDTVAVIGC 191
Query: 194 GGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQA-----GKR 247
GG+G A++ + G + + P K + A+ GA + ++ ++A R
Sbjct: 192 GGVGLNAIQGARIAGASRIIAVDPVPEKLELARR-FGATHTVNASEDDAVEAVRDLTDGR 250
Query: 248 TLDFILDTVSAKHSLGPILELLKVNGTLSVVG--APEAPFELPSFPLIFGKRSVKGSMTG 305
D+ + V ++ L + + GT VVG P LP+ L ++ ++GS+ G
Sbjct: 251 GADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYG 310
Query: 306 GMRETQEMMNVCGKYN---------ITCNIEVIKPDQINEALDRLARNDVRYRFVI 352
+++ + Y +T D+INEA + + R VI
Sbjct: 311 SANPRRDIPRLLDLYRAGRLKLDELVT---RRYSLDEINEAFADMLAGENA-RGVI 362
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363 |
| >gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 139 bits (351), Expect = 6e-38
Identities = 94/352 (26%), Positives = 164/352 (46%), Gaps = 41/352 (11%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKN---FKVGD 91
++ I++ CG+CH+D+H +K + P V GHEI+G + +VG NV+N VGD
Sbjct: 24 KEGEILIRVAACGVCHSDLHVLKGELPFPP-PFVLGHEISGEVVEVGPNVENPYGLSVGD 82
Query: 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYN---GIFWDGSI-------------TYG 135
R VG C +C +C +EN C+ F YN G +DG+ + G
Sbjct: 83 R-VVGSFIMPCGKCRYCARGKENLCEDF-FAYNRLKGTLYDGTTRLFRLDGGPVYMYSMG 140
Query: 136 GYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGG 195
G +E V + +PE++ +A L CAG T + +K + + + ++G+GG
Sbjct: 141 GLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVR--PGETVAVIGVGG 198
Query: 196 LGHVAVKFGKAFGHHVTV-ISTSPSKEKEAKELLGADEFILSTN-----AMQMQAGKRTL 249
+G A++ KAFG + + K +AKE LGA + + A++ G R +
Sbjct: 199 VGSSAIQLAKAFGASPIIAVDVRDEKLAKAKE-LGATHTVNAAKEDAVAAIREITGGRGV 257
Query: 250 DFILDTVSAKHSLGPILELLKVNGTLSVVG--APEAPFELPSFPLIFGKRSVKGSMTGGM 307
D +++ + + L++++ G VVG A E+P L+ + GS G
Sbjct: 258 DVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSY--GA 315
Query: 308 RETQEMMNVC-----GKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVID 353
R Q++ + GK + + K ++INEA + L + + R +++
Sbjct: 316 RPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367 |
| >gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase | Back alignment and domain information |
|---|
Score = 137 bits (348), Expect = 1e-37
Identities = 87/288 (30%), Positives = 137/288 (47%), Gaps = 40/288 (13%)
Query: 32 RENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGD 91
E G ++V IK+ CGIC TD+H + ++G P+VPGHE G++ VGS V FKVGD
Sbjct: 20 PEPGPDEVLIKVAACGICGTDLHIYEGEFGAA-PPLVPGHEFAGVVVAVGSKVTGFKVGD 78
Query: 92 RAAV----GCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRF 147
R AV C EC +C+ + N C+ T G+ + GG++E +V +
Sbjct: 79 RVAVDPNIYCG-----ECFYCRRGRPNLCEN--LTAVGVTRN-----GGFAEYVVVPAKQ 126
Query: 148 VVHVPENIAMDAAA---PLLCA--GITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVK 202
V +P+N++ + AA PL CA G+ +L+ + + G G +G + +
Sbjct: 127 VYKIPDNLSFEEAALAEPLSCAVHGL---------DLLGIKPGDSVLVFGAGPIGLLLAQ 177
Query: 203 FGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTN---AMQMQAGKRTLDFILDTVSA 258
K G VTV + K + AK+ LGA E + + Q + D +++
Sbjct: 178 LLKLNGASRVTVAEPNEEKLELAKK-LGATETVDPSREDPEAQKEDNPYGFDVVIEATGV 236
Query: 259 KHSLGPILELLKVNGTLSV--VGAPEAPFELPSFPLIFGKR-SVKGSM 303
+L +E + GT+ V V AP+A + F IF K ++ GS
Sbjct: 237 PKTLEQAIEYARRGGTVLVFGVYAPDARVSISPF-EIFQKELTIIGSF 283
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334 |
| >gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional | Back alignment and domain information |
|---|
Score = 134 bits (340), Expect = 1e-36
Identities = 95/330 (28%), Positives = 156/330 (47%), Gaps = 23/330 (6%)
Query: 32 RENGVNDVTIKILYCGICHTDIHHVKN-DWGITMYPVVPGHEITGIITKVGSNVKNFKVG 90
R + +K+ YCG+CHTD+H V N D+G + GHE GI+ +VG V + KVG
Sbjct: 21 RPLKHGEALVKMEYCGVCHTDLH-VANGDFGDKT-GRILGHEGIGIVKEVGPGVTSLKVG 78
Query: 91 DRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSE--MLVADYRFV 148
DR ++ C CE+C +E C ++ N G GG +E ++ ADY
Sbjct: 79 DRVSIAWFFEGCGHCEYCTTGRETLCRSVK---NA----GYTVDGGMAEQCIVTADY--A 129
Query: 149 VHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGK-AF 207
V VPE + A+ + CAG+T + +K + + P + I I G GGLG++A+++ K F
Sbjct: 130 VKVPEGLDPAQASSITCAGVTTYKAIKVSGI--KPG-QWIAIYGAGGLGNLALQYAKNVF 186
Query: 208 GHHVTVISTSPSKEKEAKELLGADEFILSTN----AMQMQAGKRTLDFILDTVSAKHSLG 263
V + + K AKE +GAD I S A +Q + T AK +
Sbjct: 187 NAKVIAVDINDDKLALAKE-VGADLTINSKRVEDVAKIIQEKTGGAHAAVVTAVAKAAFN 245
Query: 264 PILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNIT 323
++ ++ G + VG P +L L+ V GS+ G ++ +E + +
Sbjct: 246 QAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKVV 305
Query: 324 CNIEVIKPDQINEALDRLARNDVRYRFVID 353
+++ + IN+ D + + ++ R VID
Sbjct: 306 PKVQLRPLEDINDIFDEMEQGKIQGRMVID 335
|
Length = 338 |
| >gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases | Back alignment and domain information |
|---|
Score = 130 bits (328), Expect = 9e-35
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 28/277 (10%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
+V +K+ CGIC +DI P+V GHE +G + +VGS V + VGDR AV
Sbjct: 25 GEVLVKVKACGICGSDIPRYLGTGA-YHPPLVLGHEFSGTVEEVGSGVDDLAVGDRVAV- 82
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIA 156
C +CE+CK + + C Y+ I GS G ++E + R ++ +P+++
Sbjct: 83 NPLLPCGKCEYCKKGEYSLCSN----YDYI---GSRRDGAFAEYVSVPARNLIKIPDHVD 135
Query: 157 MDAAA---PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFG-HHVT 212
+ AA P A V L + ++G G +G +A+++ K G V
Sbjct: 136 YEEAAMIEPAAVALHAV-------RLAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVI 188
Query: 213 VISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRT----LDFILDTVSAKHSLGPILEL 268
+ K A+E LGAD+ I + + T D +++ + ++ L L
Sbjct: 189 AVDIDDEKLAVARE-LGADDTINPKEEDVEKVRELTEGRGADLVIEAAGSPATIEQALAL 247
Query: 269 LKVNGTLSVVGAPEAPFELPSFP---LIFGKRSVKGS 302
+ G + +VG P L ++ + +++GS
Sbjct: 248 ARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGS 284
|
This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343 |
| >gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 9e-35
Identities = 83/344 (24%), Positives = 132/344 (38%), Gaps = 42/344 (12%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITM-YPVVPGHEITGIITKVGSNVKNFKVGDRA 93
+V ++I G+CHTD H + D +P V GHE GI+ VG V + K GD
Sbjct: 26 RAGEVLVRITATGVCHTDAHTLSGD--DPEGFPAVLGHEGAGIVEAVGEGVTSVKPGDH- 82
Query: 94 AVGCLAAACMECEFCKDSQENYCDKIQFT-YNGIFWDGSITY-------------GGYSE 139
+ C +C+FC + N C+ I+ T G DG+ ++E
Sbjct: 83 VILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAE 142
Query: 140 MLVADYRFVVHVPENIAMDAAAPLLCAGIT----VFCPMKDNNLIDSPAKKRIGIVGLGG 195
V +V + + ++ A L C T V N + + GLGG
Sbjct: 143 YTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVV------NTAKVEPGDTVAVFGLGG 196
Query: 196 LGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAG-----KRTL 249
+G A++ KA G + + +P K + AK+ GA F+ +
Sbjct: 197 VGLAAIQGAKAAGAGRIIAVDINPEKLELAKK-FGATHFVNPKEVDDVVEAIVELTDGGA 255
Query: 250 DFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIF-GKRSVKGSMTGGMR 308
D+ + V + LE GT ++G A E+ + P R KGS GG R
Sbjct: 256 DYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGAR 315
Query: 309 ETQEM-----MNVCGKYNITCNI-EVIKPDQINEALDRLARNDV 346
++ + + GK + + I + INEA D +
Sbjct: 316 PRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKS 359
|
Length = 366 |
| >gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Score = 125 bits (317), Expect = 4e-33
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 37/288 (12%)
Query: 37 NDVTIKILYCGICHTDIHH---------VKNDWGIT--MYPVVPGHEITGIITKVGSNVK 85
+V IK+ +CGIC +D+H + +T PV GHE +G++ +VGS V
Sbjct: 25 GEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVGSGVT 84
Query: 86 NFKVGDRAAV-GCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVAD 144
FKVGDR V + C C CK N CD + F G+ G GG++E +V
Sbjct: 85 GFKVGDRVVVEPTI--KCGTCGACKRGLYNLCDSLGFI--GLGGGG----GGFAEYVVVP 136
Query: 145 YRFVVHVPENIAMDAAA---PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAV 201
V +P+N+ ++ AA PL A + ++ + ++G G +G + +
Sbjct: 137 AYHVHKLPDNVPLEEAALVEPLAVA----WHAVRRSGFK---PGDTALVLGAGPIGLLTI 189
Query: 202 KFGKAFGHHVTVIS-TSPSKEKEAKELLGADEFI--LSTNAMQ---MQAGKRTLDFILDT 255
KA G ++S S ++ + A+E LGA + + + G +D D
Sbjct: 190 LALKAAGASKIIVSEPSEARRELAEE-LGATIVLDPTEVDVVAEVRKLTGGGGVDVSFDC 248
Query: 256 VSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSM 303
+ +L ++ L+ GT V E P L+ ++++ GS+
Sbjct: 249 AGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSI 296
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351 |
| >gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 124 bits (315), Expect = 1e-32
Identities = 91/346 (26%), Positives = 141/346 (40%), Gaps = 50/346 (14%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++V ++I+ GICHTD+ V++ T P V GHE G++ VGS V K GD +
Sbjct: 28 DEVLVRIVATGICHTDLV-VRDGGLPTPLPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLS 86
Query: 97 CLAAACMECEFCKDSQENYCDK-IQFTYNGIFWDGSITY---GG------------YSEM 140
A+C EC C YC+ ++G DGS G ++
Sbjct: 87 --FASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATY 144
Query: 141 LVADYRFVVHVPENIAMDAAAPLLC-----AGITVFCPMKDNNLIDSPAKKRIGIVGLGG 195
V R VV V +++ ++ APL C AG V N++ I + G G
Sbjct: 145 AVVHERNVVKVDKDVPLELLAPLGCGIQTGAG-AVL------NVLKPRPGSSIAVFGAGA 197
Query: 196 LGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTL----D 250
+G AV K G + + S+ + AKE LGA I + A + D
Sbjct: 198 VGLAAVMAAKIAGCTTIIAVDIVDSRLELAKE-LGATHVINPKEEDLVAAIREITGGGVD 256
Query: 251 FILDTVSAKHSLGPILELLKVNGTLSVVGAP----EAPFELPSFPLIFGKRSVKGSMTGG 306
+ LDT + ++ L GTL++VGAP E ++ L+ GK ++G + G
Sbjct: 257 YALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDL-LVSGKT-IRGVIEGD 314
Query: 307 MRETQEM------MNVCGKYNITCNIEVIKPDQINEALDRLARNDV 346
QE + GK+ + + IN+A+ V
Sbjct: 315 -SVPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKV 359
|
Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365 |
| >gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 3e-32
Identities = 80/282 (28%), Positives = 124/282 (43%), Gaps = 24/282 (8%)
Query: 33 ENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDR 92
E G +V IK+ GIC +D+H K D+ PVV GHE +G I +VG +V+ +KVGDR
Sbjct: 23 EPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVGDR 82
Query: 93 AAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVP 152
+ C C +C+ N C + G D GG++E ++ + +P
Sbjct: 83 VVSETTFSTCGRCPYCRRGDYNLCPHRKGI--GTQAD-----GGFAEYVLVPEESLHELP 135
Query: 153 ENIAMDAAA---PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH 209
EN++++AAA PL A V + + I + + G G +G +A + K G
Sbjct: 136 ENLSLEAAALTEPLAVAVHAVA----ERSGIR--PGDTVVVFGPGPIGLLAAQVAKLQGA 189
Query: 210 HVTVISTSPSKE--KEAKELLGADEFILST----NAMQMQAGKRTLDFILDTVSAKHSLG 263
V V+ T + AKE LGAD + D +++ A +L
Sbjct: 190 TVVVVGTEKDEVRLDVAKE-LGADAVNGGEEDLAELVNEITDGDGADVVIECSGAVPALE 248
Query: 264 PILELLKVNGTLSVVG-APEAPFELPSFPLIFGKRSVKGSMT 304
LELL+ G + VG + +I + SV GS +
Sbjct: 249 QALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRS 290
|
This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306 |
| >gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 8e-32
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
+V +++ GIC +D+H + + P++ GHE GI+ +VG V KVGDR V
Sbjct: 2 GEVLVRVKAAGICGSDLHIYRGEPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVVVY 61
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV 151
L C +C C++ +EN C +F G GG++E +V R +V +
Sbjct: 62 PL-IPCGKCAACREGRENLCPNGKFL-------GVHLDGGFAEYVVVPARNLVPL 108
|
This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108 |
| >gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 2e-30
Identities = 80/312 (25%), Positives = 145/312 (46%), Gaps = 20/312 (6%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94
G ++V IK+ Y G+C+ D+ ++ + YPV+ GHE+ G + +VG NVK FK GDR A
Sbjct: 24 GKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGDRVA 83
Query: 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPEN 154
L A CE+C+ +E YC + G G ++E +V VP N
Sbjct: 84 -SLLYAPDGTCEYCRSGEEAYC-----KNRLGY--GEELDGFFAEYAKVKVTSLVKVPPN 135
Query: 155 IAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTV 213
++ + A + C V+ ++ + + + + G GG+G A++ KA G V
Sbjct: 136 VSDEGAVIVPCVTGMVYRGLRRAGV--KK-GETVLVTGAGGGVGIHAIQVAKALGAKVIA 192
Query: 214 ISTSPSKEKEAKELLGADEFILSTNAMQMQAGKR-TLDFILDTVSAKHSLGPILELLKVN 272
+++S SK K + AD +++ + + K D +++TV +L L L +
Sbjct: 193 VTSSESKAKIVSKY--AD-YVIVGSKFSEEVKKIGGADIVIETV-GTPTLEESLRSLNMG 248
Query: 273 GTLSVVG--APEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIEV-I 329
G + +G P + L +I + G ++ R+ +E + + + I I +
Sbjct: 249 GKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKIKPVIGAEV 308
Query: 330 KPDQINEALDRL 341
+I++AL+ L
Sbjct: 309 SLSEIDKALEEL 320
|
Length = 334 |
| >gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 2e-30
Identities = 72/287 (25%), Positives = 116/287 (40%), Gaps = 50/287 (17%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITM-YPVVPGHEITGIITKVGSNVKNFKVGDRAAV 95
+V +++ G+ D+ + P +PG E G++ VGS V FKVGDR A
Sbjct: 28 GEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFKVGDRVA- 86
Query: 96 GCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENI 155
G GGY+E +V ++V +P+ +
Sbjct: 87 ---------------------------ALGGVG----RDGGYAEYVVVPADWLVPLPDGL 115
Query: 156 AMDAAAPLLCAGITVF-CPMKDNNLIDSPAKKRIGIVG-LGGLGHVAVKFGKAFGHHVTV 213
+ + AA L AG+T + L + + + G GG+G A++ KA G V
Sbjct: 116 SFEEAAALPLAGLTAWLALFDRAGL---KPGETVLVHGAAGGVGSAAIQLAKALGATVVA 172
Query: 214 ISTSPSKEKEAKELLGADEFILSTN------AMQMQAGKRTLDFILDTVSAKHSLGPILE 267
+ +S K + KE LGAD I ++ G + +D +LDTV + L
Sbjct: 173 VVSSSEKLELLKE-LGADHVINYREEDFVEQVREL-TGGKGVDVVLDTVGG-DTFAASLA 229
Query: 268 LLKVNGTLSVVGAPE--APFELPSFPLIFGKRSVKGSMTGGMRETQE 312
L G L +GA P L PL+ + +++G T G R+ +
Sbjct: 230 ALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGV-TLGSRDPEA 275
|
Length = 326 |
| >gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 5e-30
Identities = 68/258 (26%), Positives = 105/258 (40%), Gaps = 43/258 (16%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMY---PVVPGHEITGIITKVGSNVKNFKVGD 91
G +V +K+ G+ D+ + P++PGH++ G++ VG V FKVGD
Sbjct: 26 GPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTGFKVGD 85
Query: 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV 151
V + + G Y+E +V +
Sbjct: 86 E--V---------------------------FGMTPFTRG---GAYAEYVVVPADELALK 113
Query: 152 PENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVG-LGGLGHVAVKFGKAFGHH 210
P N++ + AA L AG+T + + + L A + + I G GG+G AV+ KA G
Sbjct: 114 PANLSFEEAAALPLAGLTAWQALFE--LGGLKAGQTVLIHGAAGGVGSFAVQLAKARGAR 171
Query: 211 VTVISTSPSKEKEAKELLGADEFILSTNAM-QMQAGKRTLDFILDTVSAKHSLGPILELL 269
V S + + LGADE I T + A +D +LDTV + +L L L+
Sbjct: 172 VIAT-ASAANADFLRS-LGADEVIDYTKGDFERAAAPGGVDAVLDTVGGE-TLARSLALV 228
Query: 270 KVNGTL-SVVGAPEAPFE 286
K G L S+ G P A
Sbjct: 229 KPGGRLVSIAGPPPAEQA 246
|
Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309 |
| >gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 2e-29
Identities = 84/317 (26%), Positives = 134/317 (42%), Gaps = 33/317 (10%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94
G ++ +++ CG+C TD+H + D + V PGHE+ G + G++ F VGDR
Sbjct: 26 GPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVGDRVG 85
Query: 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPEN 154
+ L C C +C+ EN C ++T WD T GGY+E F +P
Sbjct: 86 IAWLRRTCGVCRYCRRGAENLCPASRYTG----WD---TDGGYAEYTTVPAAFAYRLPTG 138
Query: 155 IAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVI 214
APLLCAGI + + +L P R+G+ G GG H+ + A G V V+
Sbjct: 139 YDDVELAPLLCAGIIGYRALLRASL---PPGGRLGLYGFGGSAHLTAQVALAQGATVHVM 195
Query: 215 STSPSKEKEAKELLGADEFILSTNAMQMQAGKR---TLDFILDTVSAKHSLGPILELLKV 271
+ + + A LGA A A LD + A + P LE L
Sbjct: 196 TRGAAARRLALA-LGA--------ASAGGAYDTPPEPLDAAILFAPAGGLVPPALEALDR 246
Query: 272 NGTLSVVG-----APEAPFELPSFPLIFGKRSVKGSMTGGMR-ETQEMMNVCGKYNITCN 325
G L+V G P ++ +F +R ++ S+T R + +E + + ++ +
Sbjct: 247 GGVLAVAGIHLTDTPPLNYQRH----LFYERQIR-SVTSNTRADAREFLELAAQHGVRVT 301
Query: 326 IEVIKPDQINEALDRLA 342
+ + AL L
Sbjct: 302 THTYPLSEADRALRDLK 318
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329 |
| >gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 6e-29
Identities = 83/301 (27%), Positives = 128/301 (42%), Gaps = 42/301 (13%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
N+V IK+L +CHTDI ++ + T++PV+ GHE GI+ VG V N K GD+ +
Sbjct: 28 NEVRIKMLATSVCHTDILAIEG-FKATLFPVILGHEGAGIVESVGEGVTNLKPGDK-VIP 85
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGS--ITYGG-----------YSEMLVA 143
C EC C+ + N C K + +G+ DG+ T G +S+ V
Sbjct: 86 LFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVV 145
Query: 144 DYRFVVHVPENIAMDAAAPLLCAGITVF-CPMKDNNLIDSPAKKRIG----IVGLGGLGH 198
D +V + ++ L C T + AK G + GLG +G
Sbjct: 146 DENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNT-------AKVEPGSTVAVFGLGAVGL 198
Query: 199 VAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNAM--------QMQAGKRTL 249
A+ K G + + + K ++AKE GA +FI ++ +M G +
Sbjct: 199 SAIMGAKIAGASRIIGVDINEDKFEKAKE-FGATDFINPKDSDKPVSEVIREMTGGG--V 255
Query: 250 DFILDTVSAKHSLGPILELLKVN-GTLSVVGAPEAP-FELPSFPLIFGKRSVKGSMTGGM 307
D+ + + LE K+ G VVG P + F LI G R+ KGS GG
Sbjct: 256 DYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLILG-RTWKGSFFGGF 314
Query: 308 R 308
+
Sbjct: 315 K 315
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365 |
| >gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 3e-27
Identities = 71/278 (25%), Positives = 125/278 (44%), Gaps = 21/278 (7%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYP-VVPGHEITGIITKVGSNVKNFKVGDRA 93
G +V +++ G+C +D+H+ + Y V+PGHE G++ VG V +F+VGDR
Sbjct: 23 GPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVGDRV 82
Query: 94 AVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPE 153
V C C C+ C + Y W+ GG++E ++ + ++ +P+
Sbjct: 83 MV-YHYVGCGACRNCRRGWMQLCTSKRAAYG---WNR---DGGHAEYMLVPEKTLIPLPD 135
Query: 154 NIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFG-HHVT 212
+++ A LLC T + ++ + + + +VG G +G A+ +A G V
Sbjct: 136 DLSFADGALLLCGIGTAYHALRRVGVS---GRDTVLVVGAGPVGLGALMLARALGAEDVI 192
Query: 213 VISTSPSKEKEAKELLGADEFILSTNA-----MQMQAGKRTLDFILDTVSAKHSLGPILE 267
+ SP + + AK LGAD I S ++ +G D ++ + LE
Sbjct: 193 GVDPSPERLELAKA-LGADFVINSGQDDVQEIRELTSGAGA-DVAIECSGNTAARRLALE 250
Query: 268 LLKVNGTLSVVG-APEAPFELPSFPLIFGKRSVKGSMT 304
++ G L +VG E E S LI +R++ GS
Sbjct: 251 AVRPWGRLVLVGEGGELTIE-VSNDLIRKQRTLIGSWY 287
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339 |
| >gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 107 bits (270), Expect = 1e-26
Identities = 68/282 (24%), Positives = 103/282 (36%), Gaps = 48/282 (17%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITM---YPVVPGHEITGIITKVGSNVKNFKVGD 91
+V +K+ + D + + + +P +PG + G + VGS V FKVGD
Sbjct: 25 KPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGD 84
Query: 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV 151
V G +E +VA +
Sbjct: 85 E--VFGRLPPK------------------------------GGGALAEYVVAPESGLAKK 112
Query: 152 PENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHH 210
PE ++ + AA L AG+T ++D + +R+ I G GG+G AV+ KA G H
Sbjct: 113 PEGVSFEEAAALPVAGLTALQALRDAGKV--KPGQRVLINGASGGVGTFAVQIAKALGAH 170
Query: 211 VTVISTSPSKEKEAKELLGADEFI--LSTNAMQMQAGKRTLDFILDTV-SAKHSLGPILE 267
VT + S + + LGADE I + + + + AG D I D V ++ SL
Sbjct: 171 VTGVC-STRNAELVRS-LGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASL 228
Query: 268 LLKVNGTLSVVGAPE-----APFELPSFPLIFGKRSVKGSMT 304
LK G VG LP G+R
Sbjct: 229 ALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAK 270
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319 |
| >gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 6e-26
Identities = 83/333 (24%), Positives = 123/333 (36%), Gaps = 52/333 (15%)
Query: 39 VTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVG------SNVKNFKVGDR 92
V +++ G+C +D+H V P++ GHE G + +G + KVGDR
Sbjct: 28 VLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEPLKVGDR 87
Query: 93 A--AVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSE--MLVADYRFV 148
+VG A C C C C+ + + D GGY+E L V
Sbjct: 88 VTWSVG---APCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIV 144
Query: 149 VHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFG 208
VP+N+ + AAP CA TV + + A + + G G LG AV K G
Sbjct: 145 R-VPDNVPDEVAAPANCALATVLAAL--DRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAG 201
Query: 209 -HHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQA--------GKRTLDFILDTVSAK 259
V VI SP + + A+E GAD I Q G R D +++
Sbjct: 202 ARRVIVIDGSPERLELARE-FGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHP 260
Query: 260 HSLGPILELLKVNGTLSVVG--APEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVC 317
++ LELL+ GT +VG AP L ++ ++ G
Sbjct: 261 AAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVH-------------- 306
Query: 318 GKYNITCNIEVIKPDQINEALDRLARNDVRYRF 350
P + A+ L R R+ F
Sbjct: 307 ----------NYDPSHLYRAVRFLERTQDRFPF 329
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361 |
| >gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 1e-25
Identities = 81/335 (24%), Positives = 134/335 (40%), Gaps = 34/335 (10%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
+ V +++ CG+C +D H + P VPGHE G++ +VG +V ++VGDR V
Sbjct: 26 DGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGDRVTVP 85
Query: 97 CLAAACMECEFCKDSQENYCDKIQ---FTYNGIFWDGSITYGGYSEMLV--ADYRFVVHV 151
C C +C+ N C+ FT+ G F + + V AD +V +
Sbjct: 86 -FVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAE---------YVAVPRADVN-LVRL 134
Query: 152 PENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHV 211
P+++ AA L C T F + + + + + G GG+G AV A G V
Sbjct: 135 PDDVDFVTAAGLGCRFATAFRALVHQARVK--PGEWVAVHGCGGVGLSAVMIASALGARV 192
Query: 212 TVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTL-----DFILDTVSAKHSLGPIL 266
+ K + A+E LGA + ++ + A R L +D + + +
Sbjct: 193 IAVDIDDDKLELARE-LGAVATVNASEVEDVAAAVRDLTGGGAHVSVDALGIPETCRNSV 251
Query: 267 ELLKVNGTLSVVGAP---EAPFELPSFPLIFGKRSVKGSMTGGM--RETQEMMNVC--GK 319
L+ G VG EA LP ++ + + GS GM M+ + GK
Sbjct: 252 ASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSH--GMPAHRYDAMLALIASGK 309
Query: 320 YNITCNIE-VIKPDQINEALDRLARNDVRYRFVID 353
+ + I D+ +AL + VI
Sbjct: 310 LDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345 |
| >gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 3e-25
Identities = 95/340 (27%), Positives = 156/340 (45%), Gaps = 43/340 (12%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITM-YPVVPGHEITGIITKVGSNVKNFKVGDRA 93
G ++V +++ + H D+ + GI + P + G + G++ VG V N K G R
Sbjct: 26 GPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVKPGQRV 85
Query: 94 AVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPE 153
+ +C CE+C +EN C Q+ G D GGY+E + R ++ +P+
Sbjct: 86 VIYP-GISCGRCEYCLAGRENLCA--QYGILGEHVD-----GGYAEYVAVPARNLLPIPD 137
Query: 154 NIAMD--AAAPLLCAGITVFCPMKDNNLIDSPAKKRIG----IVGLG-GLGHVAVKFGKA 206
N++ + AAAPL +T + + L+ A+ R G + G G G+G A++ K
Sbjct: 138 NLSFEEAAAAPL--TFLTAW-----HMLVTR-ARLRPGETVLVHGAGSGVGSAAIQIAKL 189
Query: 207 FGHHVTVISTSPSKEK--EAKELLGADEFILSTN-----AMQMQAGKRTLDFILDTVSAK 259
FG TVI+T+ S++K AKE LGAD I ++ GKR +D +++ V A
Sbjct: 190 FG--ATVIATAGSEDKLERAKE-LGADYVIDYRKEDFVREVRELTGKRGVDVVVEHVGAA 246
Query: 260 HSLGPILELLKVNGTLSVVGA---PEAPFELPSFPLIFGK-RSVKGSMTGGMRETQEMMN 315
L+ L G L GA EAP +L +F + S+ GS G E E +
Sbjct: 247 TWEKS-LKSLARGGRLVTCGATTGYEAPIDLRH---VFWRQLSILGSTMGTKAELDEALR 302
Query: 316 VCGKYNITCNIE-VIKPDQINEALDRLARNDVRYRFVIDI 354
+ + + I+ V ++ EA RL + + V+
Sbjct: 303 LVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342 |
| >gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase | Back alignment and domain information |
|---|
Score = 102 bits (257), Expect = 8e-25
Identities = 68/264 (25%), Positives = 108/264 (40%), Gaps = 32/264 (12%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94
G +V +K+ CGIC TD+ ++ P + GHEI G I +VG V FKVGDR
Sbjct: 23 GPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGDRVF 82
Query: 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITY-GGYSE-MLVADYRF----V 148
V C EC +C EN C + Y GG++E + V + V
Sbjct: 83 VA-PHVPCGECHYCLRGNENMCPNYK--------KFGNLYDGGFAEYVRVPAWAVKRGGV 133
Query: 149 VHVPENIAMDAAA---PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGK 205
+ +P+N++ + AA PL C + + ++G G +G + K
Sbjct: 134 LKLPDNVSFEEAALVEPLACC-------INAQRKAGIKPGDTVLVIGAGPIGLLHAMLAK 186
Query: 206 AFG-HHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQA-----GKRTLDFILDTVSAK 259
A G V V + + + AK+ LGAD I + ++ R D ++ +
Sbjct: 187 ASGARKVIVSDLNEFRLEFAKK-LGADYTIDAAEEDLVEKVRELTDGRGADVVIVATGSP 245
Query: 260 HSLGPILELLKVNGTLSVVGAPEA 283
+ LEL++ G + G
Sbjct: 246 EAQAQALELVRKGGRILFFGGLPK 269
|
Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343 |
| >gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 9e-24
Identities = 72/315 (22%), Positives = 130/315 (41%), Gaps = 23/315 (7%)
Query: 38 DVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97
D +++ IC +D+H + + ++ GHE G + +VGS+VK K GDR +V C
Sbjct: 27 DAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPGDRVSVPC 86
Query: 98 LAAACMECEFCKDSQENYCDKIQFT-YNGIFWDGSITYGGYSEMLVADYRFVVHVPENIA 156
+ C C FC+ +C+ + G DG Y + AD + +P+ +
Sbjct: 87 I-TFCGRCRFCRRGYHAHCENGLWGWKLGNRIDG--GQAEYVRVPYADMN-LAKIPDGLP 142
Query: 157 MDAAAPLLCAGITVF--CPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFG-HHVTV 213
+ A L T F + + A ++G G +G AV + G +
Sbjct: 143 DEDALMLSDILPTGFHGAELAGIKPGSTVA-----VIGAGPVGLCAVAGARLLGAARIIA 197
Query: 214 ISTSPSKEKEAKELLGADEFILSTNA-----MQMQAGKRTLDFILDTVSAKHSLGPILEL 268
+ ++P + AKE GA + I N + G R +D +++ V + + +++
Sbjct: 198 VDSNPERLDLAKE-AGATDIINPKNGDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKV 256
Query: 269 LKVNGTLSVVGAPEAPFELPSFPLIFGKR-SVKGSMTGGMRETQEMMN--VCGKYNIT-C 324
++ GT++ VG P LP FGK + K + E+++ GK + +
Sbjct: 257 VRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKIDPSKL 316
Query: 325 NIEVIKPDQINEALD 339
D I +A
Sbjct: 317 ITHRFPLDDILKAYR 331
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347 |
| >gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 97.0 bits (242), Expect = 7e-23
Identities = 73/302 (24%), Positives = 126/302 (41%), Gaps = 35/302 (11%)
Query: 29 FKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFK 88
K + G +V I++ G+ D ++V N + P +PG E G++ +VG +VK K
Sbjct: 19 VKDPKPGPGEVLIRVKMAGVNPVD-YNVINAVKVKPMPHIPGAEFAGVVEEVGDHVKGVK 77
Query: 89 VGDRAAV------GCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLV 142
GDR V G C+ C E C NG G ++ GGY+E +V
Sbjct: 78 KGDRVVVYNRVFDG-------TCDMCLSGNEMLCR------NGGII-GVVSNGGYAEYIV 123
Query: 143 ADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVK 202
+ + +P++I+ + AA L A +T + +K L P + + G G AV+
Sbjct: 124 VPEKNLFKIPDSISDELAASLPVAALTAYHALKTAGL--GPGETVVVFGASGNTGIFAVQ 181
Query: 203 FGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ-MQAGKRTLDFILDTVSAKHS 261
K G V +S K+ + GADE + + ++ + D +++++ +
Sbjct: 182 LAKMMGAEVIAVSR-----KDWLKEFGADEVVDYDEVEEKVKEITKMADVVINSLGSS-F 235
Query: 262 LGPILELLKVNGTLSVVGA---PEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCG 318
L +L G L G E +L L + S+ GS G +E E++ +
Sbjct: 236 WDLSLSVLGRGGRLVTFGTLTGGEVKLDLSD--LYSKQISIIGSTGGTRKELLELVKIAK 293
Query: 319 KY 320
Sbjct: 294 DL 295
|
This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase | Back alignment and domain information |
|---|
Score = 96.4 bits (241), Expect = 2e-22
Identities = 74/285 (25%), Positives = 120/285 (42%), Gaps = 62/285 (21%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKN----DWGITMYPVVPGHEITGIITKVGSNVKNFKVG 90
G +V +++ GIC +D+H+ K+ D+ + P+V GHE G + VGS V + KVG
Sbjct: 21 GPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKE-PMVLGHESAGTVVAVGSGVTHLKVG 79
Query: 91 DRAAV--GCLAAACMECEFCKDSQENYCDKIQF--TYNGIFWDGSITYGGYSEMLVADYR 146
DR A+ G C CEFCK + N C ++F T DG++ +
Sbjct: 80 DRVAIEPGV---PCRTCEFCKSGRYNLCPDMRFAATPP---VDGTLC-----RYVNHPAD 128
Query: 147 FVVHVPENIAMDAAAPL--LCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFG 204
F +P+N++++ A + L G+ A +R G+ G + FG
Sbjct: 129 FCHKLPDNVSLEEGALVEPLSVGV--------------HACRRAGV----RPGDTVLVFG 170
Query: 205 ------------KAFG-HHVTVISTSPSKEKEAKELLGADEFIL--------STNAMQMQ 243
KAFG V V PS+ + AKE LGA + S +
Sbjct: 171 AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKE-LGATHTVNVRTEDTPESAEKIAEL 229
Query: 244 AGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELP 288
G + D +++ A+ + + + GT+ +VG + LP
Sbjct: 230 LGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLP 274
|
Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343 |
| >gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2 | Back alignment and domain information |
|---|
Score = 96.2 bits (240), Expect = 2e-22
Identities = 75/273 (27%), Positives = 113/273 (41%), Gaps = 38/273 (13%)
Query: 38 DVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97
D +K+ IC +D+H + T V GHE G + +VG V+ KVGDR V
Sbjct: 27 DAIVKVTAAAICGSDLHIYRGHIPST-PGFVLGHEFVGEVVEVGPEVRTLKVGDR-VVSP 84
Query: 98 LAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLV----ADYRFVVHVPE 153
AC EC +C+ Q C K + GS G V AD ++ +P+
Sbjct: 85 FTIACGECFYCRRGQSGRCAKGGL----FGYAGSPNLDGAQAEYVRVPFAD-GTLLKLPD 139
Query: 154 NIAMDAAAPLLCAGI---TVFCPMKDNNLIDSPAKKRIG----IVGLGGLGHVAVKFGKA 206
++ +AA LL I F + A+ R G ++G G +G AV +
Sbjct: 140 GLSDEAA--LLLGDILPTGYFGAKR--------AQVRPGDTVAVIGCGPVGLCAVLSAQV 189
Query: 207 FG-HHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQA-----GKRTLDFILDTVSAKH 260
G V + P + + A LGA E I +A ++ R D +L+ V
Sbjct: 190 LGAARVFAVDPVPERLERAAA-LGA-EPINFEDAEPVERVREATEGRGADVVLEAVGGAA 247
Query: 261 SLGPILELLKVNGTLSVVGAPEAPFELPSFPLI 293
+L +L++ G +S VG A E P FP +
Sbjct: 248 ALDLAFDLVRPGGVISSVGVHTAE-EFP-FPGL 278
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344 |
| >gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 96.0 bits (239), Expect = 3e-22
Identities = 79/344 (22%), Positives = 139/344 (40%), Gaps = 56/344 (16%)
Query: 38 DVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97
+V IK++ G+CHTD+H + T PV+ GHE GI+ +G V K GD+ +
Sbjct: 27 EVRIKVVATGVCHTDLHVIDGKL-PTPLPVILGHEGAGIVESIGPGVTTLKPGDK-VIPL 84
Query: 98 LAAACMECEFCKDSQENYCDKI--------------QFTYNGIFWDGSITYGGYSEMLVA 143
C +C+ C + + N C K +FT G + ++E V
Sbjct: 85 FGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVV 144
Query: 144 DYRFVVHVPENIAMDAAAPLLCA-----GITVFCPMKDNNLIDSPAKKRIG----IVGLG 194
+ + + ++ + C G V AK G + GLG
Sbjct: 145 SEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNT-----------AKVTPGSTCAVFGLG 193
Query: 195 GLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNA--------MQMQAG 245
G+G + KA G + + + K ++AK+ LGA E I + +M G
Sbjct: 194 GVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQ-LGATECINPRDQDKPIVEVLTEMTDG 252
Query: 246 KRTLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPEAPFELPSFPLI-FGKRSVKGSM 303
+D+ + + + +L L+ ++ GT VVG P + E P R++KG++
Sbjct: 253 G--VDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDLLTGRTIKGTV 310
Query: 304 TGGMRETQEMMNVC-----GKYNITCNI-EVIKPDQINEALDRL 341
GG + + + K+ + I V+ ++IN+ D +
Sbjct: 311 FGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLM 354
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365 |
| >gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like | Back alignment and domain information |
|---|
Score = 95.0 bits (237), Expect = 4e-22
Identities = 67/284 (23%), Positives = 98/284 (34%), Gaps = 55/284 (19%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++V +K+ + D H + I YP + G + G + +VGS V FKVGDR A
Sbjct: 27 DEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVGDRVAG- 84
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIA 156
F G + E +VAD +P+NI+
Sbjct: 85 ----------FVHGG----------------NPNDPRNGAFQEYVVADADLTAKIPDNIS 118
Query: 157 MDAAAPLLCAGITVFC------PMKDNNLIDSPAKKRIGIVGLGG---LGHVAVKFGKAF 207
+ AA L +T + SPA K ++ GG +G +A++ K
Sbjct: 119 FEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLA 178
Query: 208 GHHVTVIST-SPSKEKEAKELLGADEFI---LSTNAMQ-MQAGKRTLDFILDTVSAKHSL 262
G+ VI+T SP K LGAD A L + LD +S S
Sbjct: 179 GYK--VITTASPKNFDLVKS-LGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPESA 235
Query: 263 GPILELL--KVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMT 304
E L G L + LP ++ VK
Sbjct: 236 QLCAEALGRSGGGKLVSL--------LPVPEETEPRKGVKVKFV 271
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339 |
| >gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Score = 94.8 bits (236), Expect = 9e-22
Identities = 83/348 (23%), Positives = 145/348 (41%), Gaps = 42/348 (12%)
Query: 31 RRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVG 90
G +V +KI G+CH+D+ + D + P+ GHE G++ +VG V + +VG
Sbjct: 28 LDPPGPGEVLVKIAAAGLCHSDLSVINGDRPRPL-PMALGHEAAGVVVEVGEGVTDLEVG 86
Query: 91 DRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNG-----------IFWDGSITY----G 135
D V +C C C + + C+ NG G I +
Sbjct: 87 DH-VVLVFVPSCGHCRPCAEGRPALCEP-GAAANGAGTLLSGGRRLRLRGGEINHHLGVS 144
Query: 136 GYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT----VFCPMKDNNLIDSPAKKRIGIV 191
++E V R VV + +++ ++ AA CA +T V N + + +V
Sbjct: 145 AFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVV------NTAGVRPGQSVAVV 198
Query: 192 GLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRT-- 248
GLGG+G A+ A G V + + K A+E LGA + + + ++ +
Sbjct: 199 GLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARE-LGATATVNAGDPNAVEQVRELTG 257
Query: 249 --LDFILDTVSAKHSLGPILELLKVNGTLSVVG--APEAPFELPSFPLIFGKRSVKGSMT 304
+D+ + + +L E+ + GT G PEA +P+ L+ +R++KGS
Sbjct: 258 GGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGSYM 317
Query: 305 GG---MRETQEMMNV--CGKYNI-TCNIEVIKPDQINEALDRLARNDV 346
G R+ + + G+ + + D+INE DRLA +
Sbjct: 318 GSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEA 365
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371 |
| >gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase | Back alignment and domain information |
|---|
Score = 85.4 bits (212), Expect = 2e-20
Identities = 44/127 (34%), Positives = 64/127 (50%), Gaps = 8/127 (6%)
Query: 195 GLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTN-----AMQMQAGKRT 248
G+G AV+ KA G V + S K + AKEL GAD I + ++ G R
Sbjct: 1 GVGLAAVQLAKALGAARVIAVDRSEEKLELAKEL-GADHVINYRDEDFVERVRELTGGRG 59
Query: 249 LDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE-APFELPSFPLIFGKRSVKGSMTGGM 307
+D ++D V A +L LELL+ G + VVG P AP P L+ + ++ GS+ GG
Sbjct: 60 VDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFPLRDLLLKELTILGSLGGGR 119
Query: 308 RETQEMM 314
E +E +
Sbjct: 120 EEFEEAL 126
|
Length = 131 |
| >gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 89.3 bits (222), Expect = 7e-20
Identities = 97/348 (27%), Positives = 142/348 (40%), Gaps = 64/348 (18%)
Query: 38 DVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97
+V IKI+ GIC +D H V T +PV+ GHE GI+ VG V K GD+
Sbjct: 34 EVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVKPGDKVIPLF 92
Query: 98 LAAACMECEFCKDSQENYCDKI-QFTYNGIFWDGS--ITYGG-----------YSEMLVA 143
+ C +C C + + N C K G+ DG+ T G +SE V
Sbjct: 93 V-PQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVV 151
Query: 144 DYRFVVHVPENIAMDAAAPLL------CAGITVFCPMKDNNLIDSPAKKRIG----IVGL 193
D V + DAAAPL C T + + AK G + GL
Sbjct: 152 DEIAVAKI------DAAAPLEKVCLIGCGFSTGYGAAVNT------AKVTPGSTCAVFGL 199
Query: 194 GGLGHVAVKFGKAFGHHVTVISTSPSKEK--EAKELLGADEFI--------LSTNAMQMQ 243
GG+G A+ KA G +I+ +K+K +AKE LGA E I + +M
Sbjct: 200 GGVGLSAIMGCKAAG-ASRIIAVDINKDKFAKAKE-LGATECINPQDYKKPIQEVLTEMT 257
Query: 244 AGKRTLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPEAPFELPSFP-LIFGKRSVKG 301
G +DF + + ++ L G +VG P + L P L+ R+ KG
Sbjct: 258 DG--GVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKG 315
Query: 302 SMTGGMRETQEM-------MNVCGKYNITCNI-EVIKPDQINEALDRL 341
++ GG + + M K+N+ I + ++INE D L
Sbjct: 316 AVFGGWKSKDSVPKLVADYMA--KKFNLDPLITHTLPFEKINEGFDLL 361
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373 |
| >gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 88.4 bits (220), Expect = 1e-19
Identities = 69/271 (25%), Positives = 114/271 (42%), Gaps = 47/271 (17%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
+V +++ GIC +D+H YP + GHE++G + +VG V KVGDR V
Sbjct: 25 GEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGDRVVVD 84
Query: 97 -CLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENI 155
+ +C EC C+ + N C+ +Q G GG++E +V + VPE +
Sbjct: 85 PYI--SCGECYACRKGRPNCCENLQVL-------GVHRDGGFAEYIVVPAD-ALLVPEGL 134
Query: 156 AMDAAA---PL-----------LCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAV 201
++D AA PL + AG TV +VG G +G +
Sbjct: 135 SLDQAALVEPLAIGAHAVRRAGVTAGDTVL------------------VVGAGPIGLGVI 176
Query: 202 KFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRT----LDFILDTVS 257
+ KA G V V+ + + A+EL D + + + + T D ++D
Sbjct: 177 QVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGADVVIDATG 236
Query: 258 AKHSLGPILELLKVNGTLSVVGAPEAPFELP 288
S+ +EL+ G + +VG + P P
Sbjct: 237 NPASMEEAVELVAHGGRVVLVGLSKGPVTFP 267
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Score = 87.5 bits (217), Expect = 3e-19
Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 35/286 (12%)
Query: 23 KITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKN----DWGITMYPVVPGHEITGIIT 78
KI P+ G +DV +++ GIC +D+H++K D+ + P+V GHE GII
Sbjct: 30 KIQPFKLP--PLGPHDVRVRMKAVGICGSDVHYLKTMRCADF-VVKEPMVIGHECAGIIE 86
Query: 79 KVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYS 138
+VGS VK+ VGDR A+ +C C CK+ + N C +++ F+ +G +
Sbjct: 87 EVGSEVKHLVVGDRVALEP-GISCWRCNLCKEGRYNLCPEMK------FFATPPVHGSLA 139
Query: 139 EMLVADYRFVVHVPENIAMDAAAPLLCAGITV---FCPMKDNNLIDSPAKKRIGIVGLGG 195
+V +PEN++++ A +C ++V C + + + ++G G
Sbjct: 140 NQVVHPADLCFKLPENVSLEEGA--MCEPLSVGVHACRRANIG-----PETNVLVMGAGP 192
Query: 196 LGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFIL-STNAMQM--------QAG 245
+G V + +AFG + ++ + AK+ LGADE +L STN + +A
Sbjct: 193 IGLVTMLAARAFGAPRIVIVDVDDERLSVAKQ-LGADEIVLVSTNIEDVESEVEEIQKAM 251
Query: 246 KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFP 291
+D D V ++ LE + G + +VG +P P
Sbjct: 252 GGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTP 297
|
Length = 364 |
| >gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 85.8 bits (213), Expect = 7e-19
Identities = 72/289 (24%), Positives = 115/289 (39%), Gaps = 49/289 (16%)
Query: 14 GWAAHDPSGKITPYIFKRR--ENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGH 71
W P + + + G +V +K+ G+ D + YP VPG
Sbjct: 3 AWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGV 62
Query: 72 EITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGS 131
+ G++ VG+ V +KVGDR A + S
Sbjct: 63 DGAGVVVAVGAKVTGWKVGDRVA---------------------------------YHAS 89
Query: 132 IT-YGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGI 190
+ G ++E V D R V+ +P++++ + AA L CAG+T + + I+ A + I I
Sbjct: 90 LARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIE--AGRTILI 147
Query: 191 VGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN-----AMQMQA 244
G GG+G AV+ K G V + + E LGAD I + ++
Sbjct: 148 TGGAGGVGSFAVQLAKRAGLRVITTCSKRNFEYVKS--LGADHVIDYNDEDVCERIKEIT 205
Query: 245 GKRTLDFILDTVSAKHSLGPILELLKVNGTL-SVVGAPEAPFELPSFPL 292
G R +D +LDTV + + + L NG L + G P+A P F
Sbjct: 206 GGRGVDAVLDTVGGETAAA-LAPTLAFNGHLVCIQGRPDAS-PDPPFTR 252
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325 |
| >gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 86.1 bits (214), Expect = 7e-19
Identities = 93/343 (27%), Positives = 147/343 (42%), Gaps = 59/343 (17%)
Query: 39 VTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCL 98
V IKIL G+CHTD + + ++PV+ GHE GI+ VG V + K GD +
Sbjct: 30 VRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPGDH-VIPLY 88
Query: 99 AAACMECEFCKDSQENYCDKI--------------QFTYNG--IF-WDGSITYGGYSEML 141
C EC+FCK + N C KI +F+ G I+ + G+ T+ Y+ +
Sbjct: 89 TPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYT--V 146
Query: 142 VADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIG----IVGLGGLG 197
VA+ V + +D L C G+T N AK G + GLG +G
Sbjct: 147 VAEIS-VAKINPEAPLDKVCLLGC-GVTTGYGAVLNT-----AKVEPGSTVAVFGLGAVG 199
Query: 198 HVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNA--------MQMQAGKRT 248
++ KA G + I +P K + AK+ GA + + + ++M G
Sbjct: 200 LAVIQGAKAAGASRIIGIDINPDKFELAKK-FGATDCVNPKDHDKPIQQVLVEMTDGG-- 256
Query: 249 LDFILDTVSAKHSLGPILELL-KVNGTLSVVGAPEAPFELPS--FPLIFGKRSVKGSMTG 305
+D+ + + + LE K GT ++G A E+ + F L+ G R KG+ G
Sbjct: 257 VDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTG-RVWKGTAFG 315
Query: 306 GMRETQEMMNVCGKYN---------ITCNIEVIKPDQINEALD 339
G + ++ + Y IT + + D+INEA D
Sbjct: 316 GWKSRSQVPKLVEDYMKGKIKVDEFITHTMPL---DEINEAFD 355
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368 |
| >gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 86.0 bits (213), Expect = 8e-19
Identities = 76/271 (28%), Positives = 120/271 (44%), Gaps = 28/271 (10%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
+DV +K+ G+C +DI + + G YP+ GHE +G + VGS V + GD AV
Sbjct: 26 DDVLVKVASSGLCGSDIPRIFKN-GAHYYPITLGHEFSGYVEAVGSGVDDLHPGD--AVA 82
Query: 97 CLA-AACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENI 155
C+ C C C + C K F GS GG +E +V + + +P ++
Sbjct: 83 CVPLLPCFTCPECLRGFYSLCAKYDFI-------GSRRDGGNAEYIVVKRKNLFALPTDM 135
Query: 156 AMDAAAPL--LCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFG-HHVT 212
++ A + + G+ F +L K + I+G G +G +A++ A G VT
Sbjct: 136 PIEDGAFIEPITVGLHAF------HLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVT 189
Query: 213 VISTSPSKEKEAKELLGADEFILS--TNAMQMQAGKRTLDF---ILDTVSAKHSLGPILE 267
I + K AK LGA + S +A Q+Q+ R L F IL+T ++ +E
Sbjct: 190 AIDINSEKLALAKS-LGAMQTFNSREMSAPQIQSVLRELRFDQLILETAGVPQTVELAIE 248
Query: 268 LLKVNGTLSVVGAPEAPFELPS--FPLIFGK 296
+ L++VG L S F I K
Sbjct: 249 IAGPRAQLALVGTLHHDLHLTSATFGKILRK 279
|
Length = 347 |
| >gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Score = 85.4 bits (212), Expect = 1e-18
Identities = 72/273 (26%), Positives = 118/273 (43%), Gaps = 30/273 (10%)
Query: 35 GVNDVTIKILYCGICHTDIH---HVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGD 91
G +V +++ GIC +D+H H P+V GHE++G++ VG V G
Sbjct: 20 GPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQ 79
Query: 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITY-----GGYSEMLVADYR 146
R AV + C C++C+ + N C ++F GS GG+ E LV D
Sbjct: 80 RVAVNP-SRPCGTCDYCRAGRPNLCLNMRFL-------GSAMRFPHVQGGFREYLVVDAS 131
Query: 147 FVVHVPENIAMDAAA---PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKF 203
V +P+ +++ AA PL A V N A KR+ + G G +G + V
Sbjct: 132 QCVPLPDGLSLRRAALAEPLAVALHAV-------NRAGDLAGKRVLVTGAGPIGALVVAA 184
Query: 204 GKAFG-HHVTVISTSPSKEKEAKELLGADEFI-LSTNAMQM-QAGKRTLDFILDTVSAKH 260
+ G + + + A+ +GADE + L+ + + A K D + + A
Sbjct: 185 ARRAGAAEIVATDLADAPLAVARA-MGADETVNLARDPLAAYAADKGDFDVVFEASGAPA 243
Query: 261 SLGPILELLKVNGTLSVVGAPEAPFELPSFPLI 293
+L L +++ GT+ VG P LP L+
Sbjct: 244 ALASALRVVRPGGTVVQVGMLGGPVPLPLNALV 276
|
L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339 |
| >gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family | Back alignment and domain information |
|---|
Score = 82.0 bits (203), Expect = 2e-17
Identities = 89/360 (24%), Positives = 137/360 (38%), Gaps = 67/360 (18%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94
+V +K++ G+CH+D H V D + YP++ GHE G++TKVG V K GD
Sbjct: 25 KAGEVLVKLVASGLCHSDEHLVTGDLPMPRYPILGGHEGAGVVTKVGPGVTGVKPGDH-V 83
Query: 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFW-DGSITY---------------GGYS 138
V AC C +C +N CD G DG TY G +S
Sbjct: 84 VLSFIPACGRCRWCSTGLQNLCDLGAALLTGSQISDG--TYRFHADGQDVGQMCLLGTFS 141
Query: 139 EMLVADYRFVVHVPENIAMDAAAPLLCA-----GITVFCPMKDNNLIDSPAKKRIGIVGL 193
E V VV + ++I +D A + C G V N+ D + ++G+
Sbjct: 142 EYTVVPEASVVKIDDDIPLDKACLVGCGVPTGWGSAV-------NIADVRPGDTVVVMGI 194
Query: 194 GGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTN-----AMQMQAGKR 247
GG+G AV+ G V + K ++A + GA S ++ G+
Sbjct: 195 GGVGINAVQGAAVAGARKVIAVDPVEFKREQALK-FGATHAFASMEEAVQLVRELTNGQG 253
Query: 248 TLDFIL--DTVSAKHSLGPILELLKVNGTLSVVG--------APEAPFELPSFPLIFGKR 297
I+ V +H + L + G + V G FEL + K
Sbjct: 254 ADKTIITVGEVDGEH-IAEALSATRKGGRVVVTGLGPMADVDVKVNLFEL----TLLQKE 308
Query: 298 SVKGSMTGGMRETQEMMNVCGKYN---------ITCNIEVIKPDQINEAL-DRLARNDVR 347
++G++ GG ++ + Y IT DQINE D L ++R
Sbjct: 309 -LQGTLFGGANPRADIPRLLELYRAGKLKLDELIT---RTYTLDQINEGYQDMLDGKNIR 364
|
This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369 |
| >gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 80.4 bits (199), Expect = 8e-17
Identities = 80/346 (23%), Positives = 135/346 (39%), Gaps = 56/346 (16%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
+V IKIL+ +CHTD++ + ++P + GHE GI+ VG V + K GD
Sbjct: 28 MEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKPGDH---- 83
Query: 97 CLA---AACMECEFCKDSQENYCDKIQFTY--NGIFWDGSITY-------------GGYS 138
L C EC CK + N CD ++ + DG + +S
Sbjct: 84 VLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFS 143
Query: 139 EMLVADYRFVVHVPENIAMDAAAPLLCA-----GITVFCPMKDNNLIDSPAKKRIGIVGL 193
E V V + +D L C G N+ + I GL
Sbjct: 144 EYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAW-------NVAKVKKGSTVAIFGL 196
Query: 194 GGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNA--------MQMQA 244
G +G + + G + + +PSK ++AK+ G EF+ + +M
Sbjct: 197 GAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKK-FGVTEFVNPKDHDKPVQEVIAEMTG 255
Query: 245 GKRTLDFILDTVSAKHSLGPILELLKVNGTLSV-VGAPE--APFELPSFPLIFGKRSVKG 301
G +D+ + ++ E + ++V +G P A F L+ G R++KG
Sbjct: 256 GG--VDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNG-RTLKG 312
Query: 302 SMTGGMRETQEMMNVCGKY-NITCNIEV-----IKPDQINEALDRL 341
++ GG + ++ N+ KY +E + +IN+A D L
Sbjct: 313 TLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLL 358
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369 |
| >gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 79.9 bits (197), Expect = 1e-16
Identities = 85/364 (23%), Positives = 159/364 (43%), Gaps = 44/364 (12%)
Query: 9 TQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVV 68
+++ V WAA P KI + + G +V ++I+ G+CHTD + ++PV+
Sbjct: 2 SRAAVAWAAGQPL-KIEEVDVEMPQKG--EVLVRIVATGVCHTDAFTLSGADPEGVFPVI 58
Query: 69 PGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKI--------- 119
GHE GI+ VG V + KVGD + A C EC+FC + N C +
Sbjct: 59 LGHEGAGIVEAVGEGVTSVKVGDH-VIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM 117
Query: 120 -----QFTYNG--IF-WDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVF 171
+F+ +G I+ + G T+ Y+ +V + + + ++ L C T
Sbjct: 118 PDGTSRFSKDGQPIYHYMGCSTFSEYT--VVPEIS-LAKINPAAPLEEVCLLGCGVTTGI 174
Query: 172 CPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGK-AFGHHVTVISTSPSKEKEAKELLGA 230
+ + ++ + + GLGG+G ++ + A + I +P+K + AK+ LGA
Sbjct: 175 GAVLNTAKVEEGDT--VAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKK-LGA 231
Query: 231 DEFILSTN------AMQMQAGKRTLDFILDTVSAKHSLGPILELL-KVNGTLSVVGAPEA 283
+ + + + ++ +D+ + + + + LE K G ++G A
Sbjct: 232 TDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGA 291
Query: 284 PFELPS--FPLIFGKRSVKGSMTGGMRETQEMMNVCGKY-----NITCNIEVIKP-DQIN 335
E+ + F L+ G R +GS GG++ E+ + +Y + + P + IN
Sbjct: 292 GQEISTRPFQLVTG-RVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDIN 350
Query: 336 EALD 339
EA D
Sbjct: 351 EAFD 354
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368 |
| >gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 79.5 bits (197), Expect = 1e-16
Identities = 70/307 (22%), Positives = 114/307 (37%), Gaps = 68/307 (22%)
Query: 66 PVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNG 125
P++P + G + VG V FKVGDR
Sbjct: 58 PLIPLSDGAGEVVAVGEGVTRFKVGDRVV------------------------------P 87
Query: 126 IFW----DGSITY------------GGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169
F+ DG T G +E +V +V P++++ + AA L CAG+T
Sbjct: 88 TFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLT 147
Query: 170 VFCPMKDNNLIDSPAKKRIGIVGLGGLGHV---AVKFGKAFGHHVTVISTSPSKEKEAK- 225
+ N L K V + G G V A++F KA G VI+TS S EK +
Sbjct: 148 AW-----NALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAG--ARVIATSSSDEKLERA 200
Query: 226 ELLGADEFI-LSTN------AMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVV 278
+ LGAD I T +++ G R +D +++ L ++ + G +S++
Sbjct: 201 KALGADHVINYRTTPDWGEEVLKL-TGGRGVDHVVEVGGPGT-LAQSIKAVAPGGVISLI 258
Query: 279 GAPEAPFELPSFPLIFGKR-SVKGSMTGGMRETQEMMNVCGKYNITCNIE-VIKPDQINE 336
G + K +++G G + + M + I I+ V ++ E
Sbjct: 259 GFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIRPVIDRVFPFEEAKE 318
Query: 337 ALDRLAR 343
A L
Sbjct: 319 AYRYLES 325
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336 |
| >gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 79.9 bits (197), Expect = 1e-16
Identities = 73/305 (23%), Positives = 122/305 (40%), Gaps = 61/305 (20%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDW-------GITMYPVVPGHEITGIITKVGSNVKNFKV 89
+++ I++ CGIC +DIH + D G+T +PVV GHE +G++ K G NVKNF+
Sbjct: 52 DEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEK 111
Query: 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQ---FTYNGIFWDGSITYGGYSEMLVADYR 146
GD + C C C+ N+C ++ F+ +G F +E + + R
Sbjct: 112 GDPVTAEEM-MWCGMCRACRSGSPNHCKNLKELGFSADGAF----------AEYIAVNAR 160
Query: 147 FVVHV-------PENIAMDAAA---PLLCAGITVFCPMKDNNLIDSPAKKRIG----IVG 192
+ + E+ A +A A P A N L R G + G
Sbjct: 161 YAWEINELREIYSEDKAFEAGALVEPTSVAY---------NGLFIRGGGFRPGAYVVVYG 211
Query: 193 LGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLD- 250
G +G A+ KA G V S + AKE +GAD T +G++ ++
Sbjct: 212 AGPIGLAAIALAKAAGASKVIAFEISEERRNLAKE-MGADYVFNPTKMRDCLSGEKVMEV 270
Query: 251 --------FILDTVSAKHSLGPILELLKVNGTLSVVG--APEAPFELPSFPL----IFGK 296
+ + ++ + + + +NG + +G A P L + I G
Sbjct: 271 TKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGA 330
Query: 297 RSVKG 301
+ G
Sbjct: 331 QGHSG 335
|
This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384 |
| >gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 77.7 bits (192), Expect = 5e-16
Identities = 64/345 (18%), Positives = 110/345 (31%), Gaps = 67/345 (19%)
Query: 35 GVNDVTIKILYCGICHTDIH-HVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRA 93
+V +K+ G+ D+ P PG+++ G + +GS V F+VGDR
Sbjct: 26 AAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEVGDR- 84
Query: 94 AVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPE 153
V L GG +E + D +++V VPE
Sbjct: 85 -VAAL---------------------------------TRVGGNAEYINLDAKYLVPVPE 110
Query: 154 NIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVT 212
+ A L+ +T + + + +R+ I G GG+G ++ G
Sbjct: 111 GVDAAEAVCLVLNYVTAYQML--HRAAKVLTGQRVLIHGASGGVGQALLELALLAG--AE 166
Query: 213 VISTSPSKEKEAKELLGADEFILST-NAMQMQAGKRTLDFILDTVSAKHSLGPILELLKV 271
V T+ + A LGA T + + +D + D V + L
Sbjct: 167 VYGTASERNHAALRELGATPIDYRTKDWLPAMLTPGGVDVVFDGVGGESYE-ESYAALAP 225
Query: 272 NGTLSVVGAPEA--PFELPSFPLI-FGKRSVKGSMTGGMRET------------------ 310
GTL G + L R K + R
Sbjct: 226 GGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQ 285
Query: 311 --QEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVI 352
E++++ K I I + + ++ EA L V + V+
Sbjct: 286 DLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL 330
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331 |
| >gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Score = 77.3 bits (191), Expect = 8e-16
Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 46/273 (16%)
Query: 38 DVTIKILYCGICHTDIHHVKNDWGITMYPVVP--------GHEITGIITKVGSNVKNFKV 89
D +K+L IC TD+H +K D VP GHE G++ +VGS V NFKV
Sbjct: 27 DAIVKMLKTTICGTDLHILKGD--------VPTVTPGRILGHEGVGVVEEVGSAVTNFKV 78
Query: 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFW------DGSITYGGYSEMLVA 143
GDR + C+ ++C C +C+ ++C G W DG T Y + A
Sbjct: 79 GDRVLISCI-SSCGTCGYCRKGLYSHC-----ESGG--WILGNLIDG--TQAEYVRIPHA 128
Query: 144 DYRFVVHVPENIAMDAAAPLLCAGITVF-CPMKDNNLIDSPAKKRIGIVGLGGLGHVAVK 202
D + +PE + +AA L T + C + + + P + IVG G +G A+
Sbjct: 129 DNS-LYKLPEGVDEEAAVMLSDILPTGYECGVLNGKV--KPGDT-VAIVGAGPVGLAALL 184
Query: 203 FGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTN------AMQMQAGKRTLDFILDT 255
+ + + ++ ++ + AK+ LGA + S +++ G R +D +++
Sbjct: 185 TAQLYSPSKIIMVDLDDNRLEVAKK-LGATHTVNSAKGDAIEQVLELTDG-RGVDVVIEA 242
Query: 256 VSAKHSLGPILELLKVNGTLSVVGAPEAPFELP 288
V + EL+ G ++ VG P +L
Sbjct: 243 VGIPATFELCQELVAPGGHIANVGVHGKPVDLH 275
|
This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345 |
| >gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Score = 76.5 bits (189), Expect = 1e-15
Identities = 69/255 (27%), Positives = 102/255 (40%), Gaps = 60/255 (23%)
Query: 65 YPV------VPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDK 118
YP + G E+ G + VG V +KVGDR V L A
Sbjct: 51 YPPPPGASDILGLEVAGEVVAVGEGVSRWKVGDR--VCALVAG----------------- 91
Query: 119 IQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNN 178
GGY+E + V+ VPE +++ AA L TV+ +N
Sbjct: 92 ----------------GGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVW-----SN 130
Query: 179 LIDSPAKKRIGIV----GLGGLGHVAVKFGKAFGHHVTVISTSPSKEK-EAKELLGADEF 233
L K V G G+G A++ KAFG V +T+ S EK A E LGAD
Sbjct: 131 LFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFG--ARVFTTAGSDEKCAACEALGADIA 188
Query: 234 ILSTN-----AMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPF-EL 287
I ++ + G + +D ILD V + L ++ L ++G + +G EL
Sbjct: 189 INYREEDFVEVVKAETGGKGVDVILDIVGGSY-LNRNIKALALDGRIVQIGFQGGRKAEL 247
Query: 288 PSFPLIFGKRSVKGS 302
PL+ + ++ GS
Sbjct: 248 DLGPLLAKRLTITGS 262
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325 |
| >gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 76.4 bits (189), Expect = 1e-15
Identities = 56/197 (28%), Positives = 78/197 (39%), Gaps = 41/197 (20%)
Query: 66 PVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNG 125
P + G ++ G++ VG V F+VGD E C G
Sbjct: 58 PAILGCDVAGVVEAVGEGVTRFRVGD------------EVYGC---------------AG 90
Query: 126 IFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAK 185
G +E V D R + P N++M AA L GIT + + D + A
Sbjct: 91 GLGGLQ---GSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQ--AG 145
Query: 186 KRIGIV-GLGGLGHVAVKFGKAFGHHVTVIST-SPSKEKEAKELLGADEFILSTNAMQMQ 243
+ + I G GG+GHVAV+ KA G V +T S K A+ LGAD I +
Sbjct: 146 QTVLIHGGAGGVGHVAVQLAKAAG--ARVYATASSEKAAFARS-LGADPIIYYRETVVEY 202
Query: 244 AGKRT----LDFILDTV 256
+ T D + DTV
Sbjct: 203 VAEHTGGRGFDVVFDTV 219
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326 |
| >gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1 | Back alignment and domain information |
|---|
Score = 76.1 bits (188), Expect = 2e-15
Identities = 70/316 (22%), Positives = 123/316 (38%), Gaps = 67/316 (21%)
Query: 66 PVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNG 125
P+ G + +G++ +GS VK+F++GD
Sbjct: 74 PLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAV---------------------------- 105
Query: 126 IFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLI--DSP 183
+ G ++E +V V P+N++ + AA L AG+T + + + + +
Sbjct: 106 ----PPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNA 161
Query: 184 AKKRIGIVG-LGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM 242
A KR+ I+G GG+G A++ KA+G HVT T + + LGAD+ I N
Sbjct: 162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTT--TCSTDAIPLVKSLGADDVIDYNNEDFE 219
Query: 243 QAGKRT--LDFILDTV-SAKHSLGPILELLKVNGTLSVVGAPE--------APFELPSFP 291
+ D ILDTV L+LLK GT + +P +
Sbjct: 220 EELTERGKFDVILDTVGGDTEKW--ALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSA 277
Query: 292 LIFGKRSVKGSMTG-------------GMRETQEMMNVCGKYNITCNIE-VIKPDQINEA 337
+ K++VK + G + E +++ I I+ V +++ EA
Sbjct: 278 VDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVE---DGKIKPVIDKVFPFEEVPEA 334
Query: 338 LDRLARNDVRYRFVID 353
+++ R + VI
Sbjct: 335 YEKVESGHARGKTVIK 350
|
Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350 |
| >gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase | Back alignment and domain information |
|---|
Score = 75.0 bits (185), Expect = 4e-15
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 32/213 (15%)
Query: 33 ENGVNDVTIKILYCGICHTDIHHVK-NDW--GITMYPVVPGHEITGIITKVGSNVKNFKV 89
+ G +V IK+L IC TD+H + ++W P++ GHE G + +VG V KV
Sbjct: 22 KPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKV 81
Query: 90 GDRAAVGCLAA----ACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADY 145
GD ++A C +C C+ + C + I G T G ++E +V
Sbjct: 82 GDY-----VSAETHIVCGKCYQCRTGNYHVCQNTK-----IL--GVDTDGCFAEYVVVPE 129
Query: 146 RFVVHVPENIAMDAAA---PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVK 202
+ ++I + A+ PL A TV L + K + I G G +G +A+
Sbjct: 130 ENLWKNDKDIPPEIASIQEPLGNAVHTV--------LAGDVSGKSVLITGCGPIGLMAIA 181
Query: 203 FGKAFG-HHVTVISTSPSKEKEAKELLGADEFI 234
KA G V +P + + AK+ +GAD I
Sbjct: 182 VAKAAGASLVIASDPNPYRLELAKK-MGADVVI 213
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341 |
| >gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 73.9 bits (182), Expect = 9e-15
Identities = 47/201 (23%), Positives = 75/201 (37%), Gaps = 50/201 (24%)
Query: 38 DVTIKILYCGICHTDIHHVKNDWGITMY---PVVPGHEITGIITKVGSNVKNFKVGDRAA 94
V +++ CG+C +D+ +Y P PGHE G + +G V+ VGDR A
Sbjct: 21 QVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVA 80
Query: 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPEN 154
++ G ++E +AD V +P
Sbjct: 81 G------------------------------------LSGGAFAEYDLADADHAVPLPSL 104
Query: 155 IA--MDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFG-HHV 211
+ PL CA + VF A K + ++G G +G + ++ A G V
Sbjct: 105 LDGQAFPGEPLGCA-LNVF------RRGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRV 157
Query: 212 TVISTSPSKEKEAKELLGADE 232
I P++ A+E LGA E
Sbjct: 158 IAIDRRPARLALARE-LGATE 177
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312 |
| >gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 73.6 bits (182), Expect = 1e-14
Identities = 57/218 (26%), Positives = 82/218 (37%), Gaps = 60/218 (27%)
Query: 33 ENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPV----VPGHEITGIITKVGSNVKNFK 88
E G +V ++ G+ D + G+ YP+ V G E G++ VG V FK
Sbjct: 23 EPGPGEVLVRNTAIGVNFIDTYFRS---GL--YPLPLPFVLGVEGAGVVEAVGPGVTGFK 77
Query: 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFV 148
VGDR A Y G Y+E V +
Sbjct: 78 VGDRVA--------------------YAG---------------PPGAYAEYRVVPASRL 102
Query: 149 VHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-----GGLGHVAVKF 203
V +P+ I+ + AA LL G+T L+ + G L GG+G + ++
Sbjct: 103 VKLPDGISDETAAALLLQGLTAH------YLLRETYPVKPGDTVLVHAAAGGVGLLLTQW 156
Query: 204 GKAFGHHVTVISTSPSKEKE--AKELLGADEFILSTNA 239
KA G TVI T S+EK A+ GAD I +
Sbjct: 157 AKALG--ATVIGTVSSEEKAELARA-AGADHVINYRDE 191
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320 |
| >gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase | Back alignment and domain information |
|---|
Score = 73.7 bits (181), Expect = 1e-14
Identities = 73/293 (24%), Positives = 122/293 (41%), Gaps = 34/293 (11%)
Query: 33 ENGVNDVTIKILYCGICHTDIH-HVKNDWGITMYPV--VPGHEITGIITKVGSNVKNFKV 89
E G +V IK+L IC TD+H + ++W + V GHE+ G + +G V+ KV
Sbjct: 20 EPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKV 79
Query: 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVV 149
GD +V C +C C+ Q + C IF G T G ++E V + +
Sbjct: 80 GDYVSVET-HIVCGKCYACRRGQYHVC-----QNTKIF--GVDTDGCFAEYAVVPAQNIW 131
Query: 150 HVPENIAMDAAA---PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKA 206
P++I + A PL A TV L + K + + G G +G +A+ KA
Sbjct: 132 KNPKSIPPEYATIQEPLGNAVHTV--------LAGPISGKSVLVTGAGPIGLMAIAVAKA 183
Query: 207 FGHHVTVISTSPSKEKEAKELLGAD--------EFILSTNAMQMQAGKRTLDFILDTVSA 258
G + ++S E + +GA + + + G +D L+ A
Sbjct: 184 SGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEG---VDVFLEMSGA 240
Query: 259 KHSLGPILELLKVNGTLSVVGAPEAPFELP-SFPLIFGKRSVKGSMTGGMRET 310
+L L+ + G +S++G P + + +IF ++ G M ET
Sbjct: 241 PKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFET 293
|
This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340 |
| >gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 73.3 bits (181), Expect = 1e-14
Identities = 69/277 (24%), Positives = 103/277 (37%), Gaps = 76/277 (27%)
Query: 37 NDVTIKILYCGICHTDI------HHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVG 90
+V I++ G+ D+ + VK P VPG E+ G++ VG V FKVG
Sbjct: 28 GEVRIRVEAAGVNFPDLLMIQGKYQVKPP-----LPFVPGSEVAGVVEAVGEGVTGFKVG 82
Query: 91 DRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVH 150
DR GG++E +V V
Sbjct: 83 DRVV-----------------------------------ALTGQGGFAEEVVVPAAAVFP 107
Query: 151 VPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-----GGLGHVAVKFGK 205
+P+ ++ + AA L T + + A+ + G L GG+G AV+ K
Sbjct: 108 LPDGLSFEEAAALPVTYGTAYHALVRR------ARLQPGETVLVLGAAGGVGLAAVQLAK 161
Query: 206 AFGHHVTVISTSPSKEKE--AKELLGADEFILST-----NAMQMQAGKRTLDFILDTV-- 256
A G VI+ + S+EK A+ LGAD I ++ G R +D + D V
Sbjct: 162 ALG--ARVIAAASSEEKLALARA-LGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGG 218
Query: 257 -SAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPL 292
+ SL L G L V+G A E+P P
Sbjct: 219 DVFEASLR----SLAWGGRLLVIGF--ASGEIPQIPA 249
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323 |
| >gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 72.5 bits (178), Expect = 2e-14
Identities = 70/295 (23%), Positives = 109/295 (36%), Gaps = 40/295 (13%)
Query: 68 VPGHEITGIITKVGSNVKNFKVGDRAAVG-----CLAAACMECEFCKDSQENYCDKIQFT 122
V GHEI G + + G +G + C C C+ CD ++
Sbjct: 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY 60
Query: 123 YNGIFWDGSITYGGYSE--MLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLI 180
+ G GGY+E L A +V VP+++ AAP CA TV ++ +
Sbjct: 61 GHEALDSGWPLSGGYAEHCHLPAGTA-IVPVPDDLPDAVAAPAGCATATVMAALEAAGDL 119
Query: 181 DSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240
+R+ +VG G LG A A G V + +E GA
Sbjct: 120 KG---RRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEVLA 176
Query: 241 QMQAGK---RTLDFILDTVSAKHSLGPILELLKVNGTLSVVG--APEAPFELPSFPLIFG 295
+ Q G R +D L+ A ++ LE L V GT + G P P L
Sbjct: 177 ERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVAL------DP 230
Query: 296 KRSVKGSMTGGMRETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRF 350
++ V+ +T + G +N +P +++A+ LA N R+ F
Sbjct: 231 EQVVRRWLT-----------IRGVHN-------YEPRHLDQAVRFLAANGQRFPF 267
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280 |
| >gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase | Back alignment and domain information |
|---|
Score = 71.8 bits (176), Expect = 6e-14
Identities = 82/339 (24%), Positives = 142/339 (41%), Gaps = 35/339 (10%)
Query: 33 ENGVNDVTIKILYCGICHTDIHHVKNDWGIT-MYPVVPGHEITGIITKVGSNVKNFKVGD 91
+ G +V + I CG+CHTD+H+ + GI +P + GHE G++ VG V + GD
Sbjct: 23 DPGPGEVIVDIQACGVCHTDLHY--REGGINDEFPFLLGHEAAGVVEAVGEGVTDVAPGD 80
Query: 92 RAAVGCLAAACMECEFCKDSQENYC-DKIQFTYNGIFWDGS-----ITYGGYSEMLVADY 145
+ A C +C CK + YC D T DG+ + G ++E
Sbjct: 81 YVVLN-WRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAE------ 133
Query: 146 RFVVHVPENIAMDAAAPLLCAGITVFCPMKD-NNLIDSPAKKR---IGIVGLGGLGHVAV 201
+ +VH + +D AA AG+ M +++ KR + ++G GG+G A+
Sbjct: 134 KTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAI 193
Query: 202 KFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILST-----NAMQMQAGKRTLDFILDT 255
G + + K + A+E GA + S+ A++ G D ++D
Sbjct: 194 AGAALAGASKIIAVDIDDRKLEWARE-FGATHTVNSSGTDPVEAIRALTGGFGADVVIDA 252
Query: 256 VSAKHSLGPILELLKVNGTLSVVGAP--EAPFELPSFPLIFGKRSVKGSMTGGMRETQEM 313
V + + GT+ +VG P + ELP + ++K S G ++
Sbjct: 253 VGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDF 312
Query: 314 -----MNVCGKYNITCNI-EVIKPDQINEALDRLARNDV 346
+ + G+ + + E I D + EA D++ DV
Sbjct: 313 PMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDV 351
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358 |
| >gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 70.3 bits (173), Expect = 2e-13
Identities = 57/249 (22%), Positives = 89/249 (35%), Gaps = 51/249 (20%)
Query: 65 YPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYN 124
P G+E G++ VG+ V F VGDR +V
Sbjct: 57 LPARLGYEAAGVVEAVGAGVTGFAVGDRVSV----------------------------- 87
Query: 125 GIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPA 184
I YG Y+E + VV +P+ ++ AA L +T + L++ A
Sbjct: 88 -IPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAY-----GALVEL-A 140
Query: 185 KKRIGIVGL-----GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI----- 234
R G L +G A++ A G V + + K ++A LGA I
Sbjct: 141 GLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEK-RDALLALGAAHVIVTDEE 199
Query: 235 -LSTNAMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAP-EAPFELPSFPL 292
L +++ GK +D + D V + + L GTL V GA P P
Sbjct: 200 DLVAEVLRITGGK-GVDVVFDPVGGPQ-FAKLADALAPGGTLVVYGALSGEPTPFPLKAA 257
Query: 293 IFGKRSVKG 301
+ + +G
Sbjct: 258 LKKSLTFRG 266
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328 |
| >gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 70.1 bits (172), Expect = 2e-13
Identities = 75/281 (26%), Positives = 115/281 (40%), Gaps = 34/281 (12%)
Query: 37 NDVTIKILYCGICHTDIH---HVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRA 93
N ++I GIC +D+H K + P+V GHE+ G I S+ K G
Sbjct: 28 NGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVH--SDSSGLKEGQTV 85
Query: 94 AVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITY-----GGYSEMLVADYR-- 146
A+ + C C++C EN C ++F GS Y GG++ V D
Sbjct: 86 AINP-SKPCGHCKYCLSHNENQCTTMRFF-------GSAMYFPHVDGGFTRYKVVDTAQC 137
Query: 147 --FVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFG 204
+ E + M A PL + + + +L KR+ + G+G +G + V
Sbjct: 138 IPYPEKADEKV-MAFAEPL---AVAIHAAHQAGDL----QGKRVFVSGVGPIGCLIVAAV 189
Query: 205 KAFGHHVTVIS-TSPSKEKEAKELLGADEFILSTNAM--QMQAGKRTLDFILDTVSAKHS 261
K G V + SP A+E +GAD+ + N +A K D + S
Sbjct: 190 KTLGAAEIVCADVSPRSLSLARE-MGADKLVNPQNDDLDHYKAEKGYFDVSFEVSGHPSS 248
Query: 262 LGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGS 302
+ LE+ + G + VG AP E P LI + S+KGS
Sbjct: 249 INTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGS 289
|
Length = 343 |
| >gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Score = 68.5 bits (168), Expect = 6e-13
Identities = 81/344 (23%), Positives = 134/344 (38%), Gaps = 71/344 (20%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIITKVGSNVKNFKVGDRAAV 95
DV I++ Y + + D I YP +PG ++ G + V SN FK GD V
Sbjct: 28 GDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTV--VESNDPRFKPGDEVIV 85
Query: 96 GCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENI 155
T + G +GGYSE +VV +P+ +
Sbjct: 86 --------------------------TSYDL---GVSHHGGYSEYARVPAEWVVPLPKGL 116
Query: 156 AMDAAAPLLCAGITVFCP---MKDNNLIDSPAKKRIGIVG-LGGLGHVAVKFGKAFGHHV 211
+ A L AG T +++N L +P + + + G GG+G +AV G+ V
Sbjct: 117 TLKEAMILGTAGFTAALSIHRLEENGL--TPEQGPVLVTGATGGVGSLAVSILAKLGYEV 174
Query: 212 TVISTSPSKEKEAKELLGADEFILSTNAMQMQA----GKRTLDFILDTVSAKHSLGPILE 267
V ST + + + LGA E ++ +Q ++ K+ +D V K L +L
Sbjct: 175 -VASTGKADAADYLKKLGAKE-VIPREELQEESIKPLEKQRWAGAVDPVGGKT-LAYLLS 231
Query: 268 LLKVNGTLSVVGAPEAP-FELPSFPLI------FGKRSVKGSM----------TGGMRET 310
L+ G+++V G E FP I G SV+ M ++ T
Sbjct: 232 TLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATDLKPT 291
Query: 311 QEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDI 354
Q + + + I D++ EAL ++ + V R V+ +
Sbjct: 292 QLLNEI---------KQEITLDELPEALKQILQGRVTGRTVVKL 326
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326 |
| >gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 68.0 bits (167), Expect = 1e-12
Identities = 66/311 (21%), Positives = 117/311 (37%), Gaps = 52/311 (16%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94
G ND ++ C +D+H V + ++ GHE G++ +VGS VK+FK GDR
Sbjct: 23 GPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGDRVI 82
Query: 95 VGCLAAACMECEFCKDSQENYCD------KIQFTYNGIFWDGSITYGGYSEMLVADYRFV 148
V + + + K +G+F A+Y
Sbjct: 83 VPAI-TPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVF---------------AEY--- 123
Query: 149 VHVPENIAMDAAAPLLCAGIT----VFCP------MKDNNLIDSPAKKRIGIVGLGGLGH 198
HV + DA L G+T V P L + + + G+G +G
Sbjct: 124 FHVND---ADANLAPLPDGLTDEQAVMLPDMMSTGFHGAELANIKLGDTVAVFGIGPVGL 180
Query: 199 VAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNA------MQMQAGKRTLDF 251
+AV + G + + + P++ + AKE GA + + N +++ G + +D
Sbjct: 181 MAVAGARLRGAGRIIAVGSRPNRVELAKE-YGATDIVDYKNGDVVEQILKLTGG-KGVDA 238
Query: 252 ILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFG-----KRSVKGSMTGG 306
++ + + L++LK GT+S V LP +G K G GG
Sbjct: 239 VIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGG 298
Query: 307 MRETQEMMNVC 317
+ + ++
Sbjct: 299 RLRMERLASLI 309
|
This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351 |
| >gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family | Back alignment and domain information |
|---|
Score = 66.8 bits (164), Expect = 2e-12
Identities = 85/362 (23%), Positives = 137/362 (37%), Gaps = 67/362 (18%)
Query: 17 AHDPSGKITPYIFKRREN--GVNDVTIKILYCGICHTDIHHVKNDWGIT-MYPVVPGHEI 73
GK++ + + DV IK+ Y + + D + G+ YP++PG +
Sbjct: 5 VEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDA 64
Query: 74 TGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWD-GSI 132
G + V S F+ GD V G + G
Sbjct: 65 AGTV--VSSEDPRFREGDEVIV----------------------------TG--YGLGVS 92
Query: 133 TYGGYSEM--LVADYRFVVHVPENIAMDAAAPLLCAGIT-VFCPMKDNNLID---SPAKK 186
GGYS+ + AD+ +V +PE +++ A L AG T M L +P
Sbjct: 93 HDGGYSQYARVPADW--LVPLPEGLSLREAMALGTAGFTAALSVMA---LERNGLTPEDG 147
Query: 187 RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQA- 244
+ + G GG+G +AV G+ V + +E KE LGA E ++ +
Sbjct: 148 PVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKE-LGASE-VIDREDLSPPGK 205
Query: 245 --GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPS--FPLI------F 294
K +DTV H+L +L LK G ++ G +LP+ P I
Sbjct: 206 PLEKERWAGAVDTVGG-HTLANVLAQLKYGGAVAACGL-AGGPDLPTTVLPFILRGVSLL 263
Query: 295 GKRSVKGSMTGGMRET--QEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVI 352
G SV M +RE Q + N+ I +++ EAL+++ R R V+
Sbjct: 264 GIDSVYCPM--ALREAAWQRLATDLKPRNLESITREITLEELPEALEQILAGQHRGRTVV 321
Query: 353 DI 354
D+
Sbjct: 322 DV 323
|
This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323 |
| >gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 66.5 bits (163), Expect = 2e-12
Identities = 51/192 (26%), Positives = 80/192 (41%), Gaps = 27/192 (14%)
Query: 41 IKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAA 100
+++L GIC+TD+ K + +P VPGHE GI+ + VG R VG +
Sbjct: 29 VRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEAEL---VGKRV-VGEINI 81
Query: 101 ACMECEFCKDSQENYCDKIQFTYNGIF-WDGSITYGGYSEMLVADYRFVVHVPENIAMDA 159
AC CE+C+ +C T GI DG ++E L + VP+ + +
Sbjct: 82 ACGRCEYCRRGLYTHC--PNRTVLGIVDRDG-----AFAEYLTLPLENLHVVPDLVPDEQ 134
Query: 160 AA---PLLCAG-ITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVIS 215
A PL A I P+ P ++ ++G G LG + + G V ++
Sbjct: 135 AVFAEPLAAALEILEQVPIT-------PGD-KVAVLGDGKLGLLIAQVLALTGPDVVLVG 186
Query: 216 TSPSKEKEAKEL 227
K A+ L
Sbjct: 187 RHSEKLALARRL 198
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319 |
| >gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Score = 65.9 bits (162), Expect = 4e-12
Identities = 71/293 (24%), Positives = 112/293 (38%), Gaps = 77/293 (26%)
Query: 33 ENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPV------VPGHEITGIITKVGSNVKN 86
G +V I++ G+ D+ + +YP + G E+ G++ VG V
Sbjct: 24 APGPGEVLIRVAAAGVNRADLLQRQG-----LYPPPPGASDILGLEVAGVVVAVGPGVTG 78
Query: 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYR 146
+KVGDR V L A GGY+E +V
Sbjct: 79 WKVGDR--VCALLAG---------------------------------GGYAEYVVVPAG 103
Query: 147 FVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIG---IV--GLGGLGHVAV 201
++ VPE +++ AA L T + NL + G ++ G G+G A+
Sbjct: 104 QLLPVPEGLSLVEAAALPEVFFTAW-----QNLFQL-GGLKAGETVLIHGGASGVGTAAI 157
Query: 202 KFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN--------AMQMQAGKRTLDFIL 253
+ KA G V + S K + + LGAD I N ++ G R +D IL
Sbjct: 158 QLAKALGARVIATAGSEEKLEACRA-LGADVAI---NYRTEDFAEEVKEATGGRGVDVIL 213
Query: 254 DTVSAKHSLGPILELLKVNGTLSVVGA---PEAPFELPSFPLIFGKR-SVKGS 302
D V + L L L +G L ++G +A +L + KR ++ GS
Sbjct: 214 DMVGGDY-LARNLRALAPDGRLVLIGLLGGAKAELDL---APLLRKRLTLTGS 262
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323 |
| >gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Score = 65.7 bits (161), Expect = 5e-12
Identities = 54/244 (22%), Positives = 88/244 (36%), Gaps = 58/244 (23%)
Query: 66 PVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNG 125
P VPG + G++ VG V KVGDR + N
Sbjct: 58 PYVPGSDGAGVVEAVGEGVDGLKVGDRV---------------------------WLTNL 90
Query: 126 IFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAA----PLLCAGITVFCPMKDNNLID 181
W G +E +V +V +P+ ++ + A P L A +F
Sbjct: 91 G-WGRR--QGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALF---------- 137
Query: 182 SPAKKRIGIV-----GLGGLGHVAVKFGKAFGHHVTVISTSPSKEK-EAKELLGADEFIL 235
A + G G G +GH AV+ + G VI+T+ S E E GAD
Sbjct: 138 HRAGAKAGETVLVHGGSGAVGHAAVQLARWAG--ARVIATASSAEGAELVRQAGADAVFN 195
Query: 236 -----STNAMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSF 290
+ + + +D I++ ++ + L L++L G + V G+ +P
Sbjct: 196 YRAEDLADRILAATAGQGVDVIIEVLANVN-LAKDLDVLAPGGRIVVYGSGGLRGTIPIN 254
Query: 291 PLIF 294
PL+
Sbjct: 255 PLMA 258
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Score = 66.1 bits (161), Expect = 5e-12
Identities = 61/228 (26%), Positives = 97/228 (42%), Gaps = 28/228 (12%)
Query: 15 WAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVP---GH 71
W +P + + E G DV +K+ CG+CHTD+ + G+ +P GH
Sbjct: 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYM--GVRTNHALPLALGH 59
Query: 72 EITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGS 131
EI+G + + G+ ++ +G +A + C ECE CK + C + N +
Sbjct: 60 EISGRVIQAGAGAASW-IG-KAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDM----- 112
Query: 132 ITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGI- 190
GG++ +V + + V E A AAA L ++V + D A + G+
Sbjct: 113 --QGGFASHIVVPAKGLCVVDE--ARLAAAGLPLEHVSV---VADAVTTPYQAAVQAGLK 165
Query: 191 -------VGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD 231
+G GG+G V+ KA G V I P K E + GAD
Sbjct: 166 KGDLVIVIGAGGVGGYMVQTAKAMGAAVVAIDIDPEK-LEMMKGFGAD 212
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349 |
| >gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 65.6 bits (161), Expect = 5e-12
Identities = 47/133 (35%), Positives = 66/133 (49%), Gaps = 13/133 (9%)
Query: 33 ENGVNDVTIKILYCGICHTDIH-HVKNDWGITMYPV--VPGHEITGIITKVGSNVKNFKV 89
E G NDV IK+ IC TD+H + ++W PV V GHE G + +VGS V FKV
Sbjct: 22 EPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFKV 81
Query: 90 GDR-AAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFV 148
GDR + G + C C C+ + + C + G+ G G ++E LV V
Sbjct: 82 GDRVSGEGHI--VCGHCRNCRAGRRHLCRNTK----GV---GVNRPGAFAEYLVIPAFNV 132
Query: 149 VHVPENIAMDAAA 161
+P++I D AA
Sbjct: 133 WKIPDDIPDDLAA 145
|
Length = 341 |
| >gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1 | Back alignment and domain information |
|---|
Score = 66.0 bits (162), Expect = 6e-12
Identities = 54/226 (23%), Positives = 85/226 (37%), Gaps = 50/226 (22%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
D +++ IC +D+H + GHE G++ +VG V+N KVGDR V
Sbjct: 26 TDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVGDRVVV- 84
Query: 97 CLAAACMECEFCKDSQENYCD-----KIQFTYNG-----IFWDGSITYGGYSEML----- 141
AC EC +CK + CD G IF GYS +
Sbjct: 85 PFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIF--------GYSHLTGGYAG 136
Query: 142 -VADYRFV-------VHVPENIAMDAAAPLLCAGIT-------VFCPMKDNNLIDSPAKK 186
A+Y V +P++++ + A L + I +K +
Sbjct: 137 GQAEYVRVPFADVGPFKIPDDLSDEKA--LFLSDILPTGYHAAELAEVKPGDT------- 187
Query: 187 RIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGAD 231
+ + G G +G A + K G V I P + + A+ LGA+
Sbjct: 188 -VAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAE 232
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386 |
| >gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 65.5 bits (160), Expect = 8e-12
Identities = 57/215 (26%), Positives = 89/215 (41%), Gaps = 28/215 (13%)
Query: 35 GVNDVTIKILYCGICHTDI---HHVKNDWGITMY------PVVPGHEITGIITKVGSNVK 85
G ++ +K+ CGIC DI H + WG P++PGHE G + ++G +
Sbjct: 23 GPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEGAE 82
Query: 86 N--FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVA 143
KVGDR + C C FC Q C K + ++ + GG +E +
Sbjct: 83 ERGVKVGDR-VISEQIVPCWNCRFCNRGQYWMCQK-----HDLYGFQNNVNGGMAEYMRF 136
Query: 144 DYRFVVH-VPENIAMDAAA---PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHV 199
+VH VP++I + A PL CA V + D G +GLG +G
Sbjct: 137 PKEAIVHKVPDDIPPEDAILIEPLACALHAV--DRANIKFDDVVVLAGAGPLGLGMIGAA 194
Query: 200 AVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI 234
+K K + V+ + A++ GAD +
Sbjct: 195 RLKNPKK----LIVLDLKDERLALARK-FGADVVL 224
|
This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350 |
| >gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 63.9 bits (156), Expect = 2e-11
Identities = 60/275 (21%), Positives = 94/275 (34%), Gaps = 50/275 (18%)
Query: 35 GVNDVTIKILYCGICHTDIH-------HVKNDWGITMY----PVVPGHEITGIITKVGSN 83
G V +K+L CGIC +D+H V + G ++ +V GHE G + G
Sbjct: 22 GPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGPG 81
Query: 84 VKN-FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLV 142
+ KVG R C + C GGY+E ++
Sbjct: 82 TERKLKVGTR-VTSLPLLLCGQGASCGIGLSP-----------------EAPGGYAEYML 123
Query: 143 ADYRFVVHVPENIAMDAAA---PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHV 199
++ VP+ ++M+ AA PL V + ++G G +G
Sbjct: 124 LSEALLLRVPDGLSMEDAALTEPLAVGLHAV-------RRARLTPGEVALVIGCGPIGLA 176
Query: 200 AVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILST--------NAMQMQAGKRTLD 250
+ KA G + SP + A +GAD + A +AG
Sbjct: 177 VIAALKARGVGPIVASDFSPERRALA-LAMGADIVVDPAADSPFAAWAAELARAGGPKPA 235
Query: 251 FILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPF 285
I + V A + I+E G + VVG
Sbjct: 236 VIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESD 270
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341 |
| >gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase | Back alignment and domain information |
|---|
Score = 63.4 bits (155), Expect = 3e-11
Identities = 50/223 (22%), Positives = 82/223 (36%), Gaps = 64/223 (28%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++V +++ G+ D+ G E +GI+T+VGS V KVGDR V
Sbjct: 1 DEVEVEVKAAGLNFRDVLVALGLLPGD--ETPLGLECSGIVTRVGSGVTGLKVGDR--VM 56
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIA 156
LA G ++ + D R VV +P++++
Sbjct: 57 GLAP----------------------------------GAFATHVRVDARLVVKIPDSLS 82
Query: 157 MDAAAPLLCAGITVF------CPMKDNN--LIDSPAKKRIGIVGLGGLGHVAVKFGKAFG 208
+ AA L A +T + ++ LI + A GG+G A++ + G
Sbjct: 83 FEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAA---------GGVGQAAIQLAQHLG 133
Query: 209 HHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDF 251
V S K + +EL G + I S+ R L F
Sbjct: 134 AEVFATVGSEEKREFLRELGGPVDHIFSS---------RDLSF 167
|
Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293 |
| >gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast | Back alignment and domain information |
|---|
Score = 62.3 bits (152), Expect = 8e-11
Identities = 80/359 (22%), Positives = 142/359 (39%), Gaps = 76/359 (21%)
Query: 37 NDVTIKILYCGICHTD--IHHVKNDWGITMYPVVPGHEITGIITKVGSNVKN-FKVGDRA 93
N++ +K+ + D +++ + + G + +G+I KVGSNV + +KVGD
Sbjct: 29 NEIVVKVHAAALNPVDLKLYNSYT-FHFKVKEKGLGRDYSGVIVKVGSNVASEWKVGDEV 87
Query: 94 AVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVAD----YRFVV 149
GI+ G S+ L+ D + +
Sbjct: 88 ------------------------------CGIYPHPYGGQGTLSQYLLVDPKKDKKSIT 117
Query: 150 HVPENIAMD-AAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGG---LGHVAVKFGK 205
PENI+++ AAA L G T + ++D P K ++ LGG +G A++ K
Sbjct: 118 RKPENISLEEAAAWPLVLG-TAYQILEDLGQKLGPDSK---VLVLGGSTSVGRFAIQLAK 173
Query: 206 AFGHHVTVISTSPSKEKEAKELLGADEFI--LSTNAMQ-----MQAGKRT--LDFILDTV 256
+ TV+ T S+ E + LGAD FI + + ++ ++ K D ILD V
Sbjct: 174 NHYNIGTVVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCV 233
Query: 257 SAKHSLGPILELLKV---NGT-LSVVGAPEAPFELPSF----PLIFGKRSVKGS------ 302
I +LK NG +++VG +A ++ +F R + GS
Sbjct: 234 GGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSY 293
Query: 303 --MTGGMRETQEMMNVCGKY----NITCNIEVIKP-DQINEALDRLARNDVRYRFVIDI 354
+ + + C + + I+ + P + EA +RL N + + VI +
Sbjct: 294 NYQFFLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV 352
|
This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352 |
| >gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 61.7 bits (150), Expect = 1e-10
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 12/126 (9%)
Query: 38 DVTIKILYCGICHTDIH--HVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAV 95
+V +K+ GIC +D H N + YP V GHE G+I VG V ++G+R AV
Sbjct: 26 EVRVKVKLAGICGSDSHIYRGHNPF--AKYPRVIGHEFFGVIDAVGEGVDAARIGERVAV 83
Query: 96 GCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENI 155
+ +C C C + N C + G+ D GG+SE V + +P+ I
Sbjct: 84 DPV-ISCGHCYPCSIGKPNVCTSLVVL--GVHRD-----GGFSEYAVVPAKNAHRIPDAI 135
Query: 156 AMDAAA 161
A A
Sbjct: 136 ADQYAV 141
|
Length = 339 |
| >gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Score = 61.7 bits (150), Expect = 1e-10
Identities = 90/350 (25%), Positives = 145/350 (41%), Gaps = 61/350 (17%)
Query: 38 DVTIKILYCGICHTDIHHVKNDWGIT-MYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
+V IKILY ICHTD+ K + YP + GHE GI+ VG V++ K GD +
Sbjct: 37 EVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEDLKAGDH-VIP 95
Query: 97 CLAAACMECEFCKDSQENYCD---------------KIQFTYNGIFWDGSITY-----GG 136
C +C +CK + N C+ K +F+ G DG Y
Sbjct: 96 IFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKG---DGQPIYHFLNTST 152
Query: 137 YSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGL 196
++E V D VV + N + + L C G++ N + A + I GLG +
Sbjct: 153 FTEYTVLDSACVVKIDPNAPLKKMSLLSC-GVSTGVGAA-WNTANVQAGSSVAIFGLGAV 210
Query: 197 GHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNA--------MQMQAGKR 247
G + +A G + + +P K ++ KE +G +FI ++ +M G
Sbjct: 211 GLAVAEGARARGASKIIGVDINPEKFEKGKE-MGITDFINPKDSDKPVHERIREMTGGG- 268
Query: 248 TLDFILDTVSAKHSLGPILELLKVN--------GTLSVVGAPEAPFELPSFPL-IFGKRS 298
+D+ + +E+L+ G ++G P LP P+ +F RS
Sbjct: 269 -VDYSFECAG-------NVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRS 320
Query: 299 VKGSMTGGMR-ETQ--EMMNVC--GKYNITCNIEVIKP-DQINEALDRLA 342
+ GS+ G + ++Q + C G N+ I P ++INEA L
Sbjct: 321 ITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLE 370
|
Length = 381 |
| >gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Score = 60.2 bits (147), Expect = 3e-10
Identities = 62/269 (23%), Positives = 103/269 (38%), Gaps = 50/269 (18%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITM-YPVVPGHEITGIITKVGSNVKNFKVGDRAAV 95
DV I++ Y + + D + G+T YP PG + G + V S+ F+ GD V
Sbjct: 28 GDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTV--VSSDDPRFREGDEVLV 85
Query: 96 GCLAAACMECEFCKDSQENYCDKIQFTYNGIFWD-GSITYGGYSEMLVADYRFVVHVPEN 154
G +D G T GG++E + +VV +PE
Sbjct: 86 ----------------------------TG--YDLGMNTDGGFAEYVRVPADWVVPLPEG 115
Query: 155 IAMDAAAPL----LCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGH 209
+++ A L A ++V ++DN +P + + G GG+G +AV G+
Sbjct: 116 LSLREAMILGTAGFTAALSVH-RLEDNGQ--TPEDGPVLVTGATGGVGSIAVAILAKLGY 172
Query: 210 HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAG----KRTLDFILDTVSAKHSLGPI 265
V ++ + K LGA E +L + ++ K +DTV L +
Sbjct: 173 TVVALTGKEEQADYLKS-LGASE-VLDREDLLDESKKPLLKARWAGAIDTVGGDV-LANL 229
Query: 266 LELLKVNGTLSVVG-APEAPFELPSFPLI 293
L+ K G ++ G A P I
Sbjct: 230 LKQTKYGGVVASCGNAAGPELTTTVLPFI 258
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 4e-10
Identities = 53/209 (25%), Positives = 74/209 (35%), Gaps = 57/209 (27%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVP---GHEITGIITKVGSNVKNFKVGD 91
G +V +K + GI +DI+ + + P P G E G + VG V +FKVGD
Sbjct: 29 GPGEVLVKNRFVGINASDINFTAGRYDPGVKP--PFDCGFEGVGEVVAVGEGVTDFKVGD 86
Query: 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV 151
A ++++G ++E V R V V
Sbjct: 87 AVA------------------------------------TMSFGAFAEYQVVPARHAVPV 110
Query: 152 PENIAMDAAAPLLCAGITVFC------PMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGK 205
PE PLL +G+T MK + A GG G AV+ K
Sbjct: 111 PE--LKPEVLPLLVSGLTASIALEEVGEMKSGETVLVTA-------AAGGTGQFAVQLAK 161
Query: 206 AFGHHVTVISTSPSKEKEAKELLGADEFI 234
G HV +S K + K LG D I
Sbjct: 162 LAGCHVIGTCSSDEKAEFLKS-LGCDRPI 189
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329 |
| >gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH) | Back alignment and domain information |
|---|
Score = 59.9 bits (146), Expect = 5e-10
Identities = 38/121 (31%), Positives = 52/121 (42%), Gaps = 17/121 (14%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
D ++I IC +D+H + G +V GHE G + +VGS V++ KVGDR V
Sbjct: 26 TDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVGDRVVVP 84
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEM-----LVADYRFVVHV 151
AC C CK C T N G+ GY +M A+Y + V
Sbjct: 85 F-NVACGRCRNCKRGLTGVC----LTVNPGRAGGA---YGYVDMGPYGGGQAEY---LRV 133
Query: 152 P 152
P
Sbjct: 134 P 134
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375 |
| >gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members | Back alignment and domain information |
|---|
Score = 59.5 bits (145), Expect = 7e-10
Identities = 59/232 (25%), Positives = 97/232 (41%), Gaps = 45/232 (19%)
Query: 66 PVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNG 125
P + G + +G++ VGS V FKVGD
Sbjct: 60 PKILGWDASGVVEAVGSEVTLFKVGDE--------------------------------- 86
Query: 126 IFWDGSITY-GGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSP- 183
+++ G IT G +E + D R V H P++++ AA L +T + + D I
Sbjct: 87 VYYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDA 146
Query: 184 --AKKRIGIV-GLGGLGHVAVKFGKAFGHHVTVISTS--PSKEKEAKELLGADEFILSTN 238
K + I+ G GG+G +A++ K +TVI+T+ P KE LGAD I
Sbjct: 147 ENEGKTLLIIGGAGGVGSIAIQLAKQLT-GLTVIATASRPESIAWVKE-LGADHVINHHQ 204
Query: 239 AM--QMQA-GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFEL 287
+ Q++A G +D+I + EL+ G + ++ P+ P +L
Sbjct: 205 DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQEPLDL 256
|
This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336 |
| >gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 59.1 bits (144), Expect = 8e-10
Identities = 61/262 (23%), Positives = 98/262 (37%), Gaps = 61/262 (23%)
Query: 33 ENGVNDVTIKILYCGICHTDIHHVKNDWGITM-YPVVPGHEITGIITKVGSNVKNFKVGD 91
E +V +++ CG+ D+ + + P VPG E G + VG VK+FKVGD
Sbjct: 23 EPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVGD 82
Query: 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV 151
R +GGY+E++ V +
Sbjct: 83 RVMGLTR-----------------------------------FGGYAEVVNVPADQVFPL 107
Query: 152 PENIAMDAAAPLLCAGIT------VFCPMK--DNNLIDSPAKKRIGIVGLGGLGHVAVKF 203
P+ ++ + AA +T ++ + L+ S A GG+G A +
Sbjct: 108 PDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAA---------GGVGLAAGQL 158
Query: 204 GKAFGHHVTVIST-SPSKEKEAKELLGADEFILSTNAMQMQAGKR----TLDFILDTVSA 258
K +VTV+ T S SK + KE G I ++ K+ +D +LD +
Sbjct: 159 CKTV-PNVTVVGTASASKHEALKE-NGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGG 216
Query: 259 KHSLGPILELLKVNGTLSVVGA 280
+ +LLK G L V GA
Sbjct: 217 E-DTRKSYDLLKPMGRLVVYGA 237
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Score = 58.0 bits (140), Expect = 2e-09
Identities = 70/310 (22%), Positives = 126/310 (40%), Gaps = 38/310 (12%)
Query: 38 DVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97
++ IK++ +C +D+ ++ ++P + GHE +GI+ +G V F+ GD +
Sbjct: 39 EIRIKVVSTSLCRSDLSAWESQ---ALFPRIFGHEASGIVESIGEGVTEFEKGDH-VLTV 94
Query: 98 LAAACMECEFCKDSQENYCDKIQFTYNGIFWD---------GSITYGGYSEMLVADYRFV 148
C C C + N C + G+ G Y + ++Y V
Sbjct: 95 FTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYT-V 153
Query: 149 VHVPENIAMDAAAPL---------LCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHV 199
VH + +D APL + AG+ N+ D + I GLG +G
Sbjct: 154 VHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAW-----NVADVSKGSSVVIFGLGTVGLS 208
Query: 200 AVKFGKAFGHHVTV-ISTSPSKEKEAKELLGADEFILSTNAMQ--MQAGKRT----LDFI 252
+ K G + + +P K ++AK G +FI + + Q KR D+
Sbjct: 209 VAQGAKLRGASQIIGVDINPEKAEKAK-TFGVTDFINPNDLSEPIQQVIKRMTGGGADYS 267
Query: 253 LDTVSAKHSLGPILELLKVNGTLSV-VGAPEAPFELPS-FPLIFGKRSVKGSMTGGMRET 310
+ V L+ L+V +G P+A E+ + + L R++KGS+ GG +
Sbjct: 268 FECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGGWKPK 327
Query: 311 QEMMNVCGKY 320
++ ++ KY
Sbjct: 328 SDLPSLVDKY 337
|
Length = 378 |
| >gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 5e-09
Identities = 46/217 (21%), Positives = 81/217 (37%), Gaps = 50/217 (23%)
Query: 66 PVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNG 125
P+ PG+ G + +VGS V FK GDR
Sbjct: 21 PLPPGYSSVGRVVEVGSGVTGFKPGDRVFC------------------------------ 50
Query: 126 IFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAA--PLLCAGITVFCPMKDNNLIDSP 183
+G ++E +V +V +P+ + + AA L + +
Sbjct: 51 --------FGPHAERVVVPANLLVPLPDGLPPERAALTALAATALNGV------RDAEPR 96
Query: 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQM 242
+R+ +VGLG +G +A + KA G V + ++ + A+ L AD
Sbjct: 97 LGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADP---VAADTAD 153
Query: 243 QAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVG 279
+ G R D +++ + +L L LL+ G + +VG
Sbjct: 154 EIGGRGADVVIEASGSPSALETALRLLRDRGRVVLVG 190
|
This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277 |
| >gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 55.4 bits (134), Expect = 1e-08
Identities = 61/268 (22%), Positives = 96/268 (35%), Gaps = 81/268 (30%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGH------EITGIITKVGSNVKNFKVG 90
NDV IK+ G+ D + YP PG E+ G + VGS+VK FK G
Sbjct: 29 NDVLIKVSAAGVNRADTLQRQGK-----YPPPPGSSEILGLEVAGYVEDVGSDVKRFKEG 83
Query: 91 DRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVH 150
DR + L GGY+E VA V+H
Sbjct: 84 DRV-MALLPG----------------------------------GGYAEYAVAHKGHVMH 108
Query: 151 VPENIAMDAAAPLLCAGITVFCPMK--------DNNLIDSPAKKRIGIVGLGGLGHVAVK 202
+P+ + AA + A +T + +K + LI + A G+G A +
Sbjct: 109 IPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGAS---------GVGTAAAQ 159
Query: 203 FGKAFGHHVTVISTSPSKEKEAKEL-----------LGADEFILSTNAMQMQAGKRTLDF 251
+ +G + ++S K K+L G + G++ ++
Sbjct: 160 LAEKYGAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKK------LTGEKGVNL 213
Query: 252 ILDTVSAKHSLGPILELLKVNGTLSVVG 279
+LD V + L E+L V+G V G
Sbjct: 214 VLDCVGGSY-LSETAEVLAVDGKWIVYG 240
|
Length = 334 |
| >gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase | Back alignment and domain information |
|---|
Score = 54.5 bits (132), Expect = 3e-08
Identities = 60/289 (20%), Positives = 103/289 (35%), Gaps = 49/289 (16%)
Query: 31 RRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYP-----VVPGHEITGIITKVGSNVK 85
E +V ++ L G+C TD P +V GHE G++ +VG
Sbjct: 20 EPEPTPGEVLVRTLEVGVCGTD--REIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-S 76
Query: 86 NFKVGDRAAVGCLAAA-----CMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGY-SE 139
GD L +C C+ + ++C+ ++T GI G G+ E
Sbjct: 77 GLSPGD------LVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGI--KGL---HGFMRE 125
Query: 140 MLVADYRFVVHVP---ENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIG------- 189
V D ++V VP ++ + PL K ++ K+
Sbjct: 126 YFVDDPEYLVKVPPSLADVGV-LLEPLSVV-------EKAIEQAEAVQKRLPTWNPRRAL 177
Query: 190 IVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAK--ELLGADEFILSTNAMQMQAGK- 246
++G G +G +A + G V V++ + +A E LGA ++ S+ +
Sbjct: 178 VLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGAT-YVNSSKTPVAEVKLV 236
Query: 247 RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA--PFELPSFPLI 293
D I++ L L NG + + G P FE+ L
Sbjct: 237 GEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELN 285
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355 |
| >gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase | Back alignment and domain information |
|---|
Score = 53.9 bits (131), Expect = 3e-08
Identities = 48/203 (23%), Positives = 74/203 (36%), Gaps = 70/203 (34%)
Query: 61 GITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQ 120
G+ V G E G++T+VG V VGDR V LA
Sbjct: 18 GLYPGEAVLGGECAGVVTRVGPGVTGLAVGDR--VMGLAP-------------------- 55
Query: 121 FTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNN-- 178
G ++ +V D R VV +P+ + + AA + +T + + D
Sbjct: 56 --------------GAFATRVVTDARLVVPIPDGWSFEEAATVPVVFLTAYYALVDLARL 101
Query: 179 ------LIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---G 229
LI + A GG+G A++ + G V +T+ S EK ++ L G
Sbjct: 102 RPGESVLIHAAA---------GGVGQAAIQLARHLG--AEVFATAGSPEK--RDFLRALG 148
Query: 230 -ADEFILSTNAMQMQAGKRTLDF 251
D+ I S+ R L F
Sbjct: 149 IPDDHIFSS---------RDLSF 162
|
Enoylreductase in Polyketide synthases. Length = 287 |
| >gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 5e-08
Identities = 65/279 (23%), Positives = 110/279 (39%), Gaps = 26/279 (9%)
Query: 38 DVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97
D I+++ +C +D+ + P GHE G++ +VGS V + K GD +
Sbjct: 27 DAVIRVVATCVCGSDLWPYRGVSPTR-APAPIGHEFVGVVEEVGSEVTSVKPGDF-VIAP 84
Query: 98 LAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEML---VADYRFVVHVPEN 154
A + C FC+ C +G FW + GG E + +AD +V VP +
Sbjct: 85 FAISDGTCPFCRAGFTTSCV------HGGFWGAFVD-GGQGEYVRVPLADGT-LVKVPGS 136
Query: 155 IAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIG----IVGLGGLGHVAVKFGKAFG-H 209
+ D LL + + + M + A R G +VG G +G AV K G
Sbjct: 137 PSDDED--LLPSLLALSDVMGTGHHAAVSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAE 194
Query: 210 HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTL-----DFILDTVSAKHSLGP 264
+ +S ++ A+E GA + + + + D +L+ V + S+
Sbjct: 195 RIIAMSRHEDRQALARE-FGATDIVAERGEEAVARVRELTGGVGADAVLECVGTQESMEQ 253
Query: 265 ILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSM 303
+ + + G + VG P EL L F + G
Sbjct: 254 AIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGP 292
|
This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345 |
| >gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 6e-08
Identities = 55/240 (22%), Positives = 95/240 (39%), Gaps = 47/240 (19%)
Query: 66 PVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNG 125
P + G + G++ VG V FK GD
Sbjct: 59 PKILGWDAAGVVVAVGDEVTLFKPGDE--------------------------------- 85
Query: 126 IFWDGSITY-GGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDN-NLID-- 181
+++ G I G +E + D R V H P++++ AA L IT + + D + D
Sbjct: 86 VWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPV 145
Query: 182 SPAKKRIGIVG-LGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL-LGADEFILSTNA 239
+ K+ + I+G GG+G + ++ + +TVI+T+ E + L LGA I +
Sbjct: 146 AGDKRALLIIGGAGGVGSILIQLARQLT-GLTVIATASRPESQEWVLELGAHHVIDHSKP 204
Query: 240 MQMQAGKRTL---DFILDTVSAKHSLGPILELLKVNGTLSVVGAPE----APFELPSFPL 292
++ Q K L ++ I+ELL G +++ P +PF+ S L
Sbjct: 205 LKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDPAELDISPFKRKSISL 264
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336 |
| >gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 9e-08
Identities = 46/208 (22%), Positives = 77/208 (37%), Gaps = 49/208 (23%)
Query: 63 TM--YPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQ 120
TM YP PG E +G++ VG +V VGD G
Sbjct: 33 TMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGT----------------------- 69
Query: 121 FTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLI 180
+ GG++ ++ VV P +++ + A L +TV L
Sbjct: 70 ----------GESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGL- 118
Query: 181 DSPAKKRIGI-VGLGGLGHVAVKFGKAFGHHVTVISTSPSKEK-EAKELLGADEFI---- 234
+ I I GG G +AV+ + G + +T+ S +K E + LG I
Sbjct: 119 --AKGEHILIQTATGGTGLMAVQLARLKG--AEIYATASSDDKLEYLKQLGVPHVINYVE 174
Query: 235 --LSTNAMQMQAGKRTLDFILDTVSAKH 260
M++ G R +D +++T+S +
Sbjct: 175 EDFEEEIMRLTGG-RGVDVVINTLSGEA 201
|
Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303 |
| >gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Score = 51.8 bits (124), Expect = 2e-07
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 39 VTIKILYCGICHTDIHHVKNDWGITMYPV--VPGHEITGIITKVGSNVKNFKVGDRAAVG 96
V +K++ IC +D H V+ G T P V GHEITG + + G +V+ K+GD +V
Sbjct: 36 VILKVVTTNICGSDQHMVR---GRTTAPTGLVLGHEITGEVIEKGRDVEFIKIGDIVSVP 92
Query: 97 CLAAACMECEFCKDSQENYC 116
AC C CK+ C
Sbjct: 93 -FNIACGRCRNCKEGHTGVC 111
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393 |
| >gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 4e-07
Identities = 62/274 (22%), Positives = 100/274 (36%), Gaps = 54/274 (19%)
Query: 35 GVNDVTIKILYCGICHTDI-------------------HHVKNDWGITM-YPVVPGHEIT 74
+V I++ CG+ +TDI WG T+ +P + G +I
Sbjct: 27 APGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRIQGADIV 86
Query: 75 GIITKVGSNVKNFKVGDRAAVGCLAAACMECEFC-KDSQENYCDKIQFTYNGIFWDGSIT 133
G + VG V ++G+R V + +D E+ I + GS
Sbjct: 87 GRVVAVGEGVDTARIGERVLV----------DPSIRDPPEDDPADIDYI-------GSER 129
Query: 134 YGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDS---PAKKRIGI 190
GG++E V V ++ A C+ T N+++ A + + +
Sbjct: 130 DGGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTA------ENMLERAGVGAGETVLV 183
Query: 191 VGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN---AMQMQAGK 246
G GG+G V+ K G V + +KE+ + LGAD IL A G
Sbjct: 184 TGASGGVGSALVQLAKRRGAIVIAV-AGAAKEEAVRA-LGADTVILRDAPLLADAKALGG 241
Query: 247 RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGA 280
+D + D V +L LL+ G GA
Sbjct: 242 EPVDVVADVVGGP-LFPDLLRLLRPGGRYVTAGA 274
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350 |
| >gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 7e-07
Identities = 57/234 (24%), Positives = 83/234 (35%), Gaps = 60/234 (25%)
Query: 66 PVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNG 125
P VPG E+ G++ VG V +G R V A
Sbjct: 60 PYVPGGEVAGVVDAVGPGVDPAWLGRRV-VAHTGRAG----------------------- 95
Query: 126 IFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAK 185
GGY+E+ VAD + VP+ + ++AA ++ G T + A
Sbjct: 96 ---------GGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-------GLLDLAT 139
Query: 186 KRIGIVGL-----GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILST--- 237
G V L GGLG + V+ KA G V + P+K + LGAD + T
Sbjct: 140 LTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRA-LGADVAVDYTRPD 198
Query: 238 --NAMQMQAGKRTLDFILDTVSAKHSLGPI----LELLKVNGTLSVVGAPEAPF 285
+ ++ G + +LD V G I L LL G G +
Sbjct: 199 WPDQVREALGGGGVTVVLDGVG-----GAIGRAALALLAPGGRFLTYGWASGEW 247
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324 |
| >gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 2e-06
Identities = 52/254 (20%), Positives = 87/254 (34%), Gaps = 56/254 (22%)
Query: 39 VTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97
V +++L I +D+ + +G P VPG+E G++ +VGS V VG R
Sbjct: 29 VLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLP-- 86
Query: 98 LAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAM 157
G + E +VA ++ VP++I+
Sbjct: 87 ---------------------------------LGGEGTWQEYVVAPADDLIPVPDSISD 113
Query: 158 DAAA-----PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLG-GLGHVAVKFGKAFGHHV 211
+ AA PL + + P + +G + ++ K G
Sbjct: 114 EQAAMLYINPLTAWLML-------TEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKT 166
Query: 212 TVISTSPSKEKEAKELLGADEFIL-STNAMQMQAGKRT----LDFILDTVSAKHSLGPIL 266
+ + +E K LGADE I S + + + T LD V + S +
Sbjct: 167 INVVRRDEQVEELKA-LGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGE-SATRLA 224
Query: 267 ELLKVNGTLSVVGA 280
L+ GTL G
Sbjct: 225 RSLRPGGTLVNYGL 238
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323 |
| >gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 6e-06
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 19/175 (10%)
Query: 70 GHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWD 129
G + +GI+ VG VKN+KVGD V C + + E F + W
Sbjct: 86 GSDASGIVWAVGEGVKNWKVGDEVVVHCSV-------WDGNDPERAGGDPMFDPSQRIWG 138
Query: 130 GSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIG 189
YG +++ + ++ P++++ + AA + G T + + N P + G
Sbjct: 139 YETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWN----PNTVKPG 194
Query: 190 IVGL-----GGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTN 238
L GGLG +A++ +A G + V V+S S K + + LGA+ I +
Sbjct: 195 DNVLIWGASGGLGSMAIQLARAAGANPVAVVS-SEEKAEYCRA-LGAEGVINRRD 247
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393 |
| >gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 8e-06
Identities = 41/177 (23%), Positives = 70/177 (39%), Gaps = 21/177 (11%)
Query: 68 VPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIF 127
+ G + +G++ +VG V +KVGD C + + + +
Sbjct: 80 IIGSDASGVVWRVGPGVTRWKVGDEVVASC-------LQVDLTAPDGRDGDPMLSSEQRI 132
Query: 128 WDGSITYGGYSEM-LVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLI-DSPAK 185
W +G ++E LV DY+ + +AA P L T + L+ +PA
Sbjct: 133 WGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGA-TAY-----RQLVGWNPAA 186
Query: 186 KRIGIVGL-----GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILST 237
+ G L GGLG A + +A G + + +SP K + + LGA+ I
Sbjct: 187 VKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRS-LGAEAVIDRN 242
|
The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398 |
| >gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 1e-05
Identities = 65/291 (22%), Positives = 113/291 (38%), Gaps = 58/291 (19%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGI--TMYPVVPGHEITGIITKVGSNVKNFKVGDR 92
G +V ++ I + D+ ++ +G + P + G E G++ VG VK +VG R
Sbjct: 27 GAGEVLVRTTLSPIHNHDLWTIRGTYGYKPEL-PAIGGSEAVGVVDAVGEGVKGLQVGQR 85
Query: 93 AAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVP 152
AV + G ++E VA +V +P
Sbjct: 86 VAVA----------------------------PVH-------GTWAEYFVAPADGLVPLP 110
Query: 153 ENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIV---GLGGLGHVAVKFGKAFGH 209
+ I+ + AA L+ ++ + K ++ G +G + A G
Sbjct: 111 DGISDEVAAQLIAMPLSALMLLDFLG-----VKPGQWLIQNAAGGAVGKLVAMLAAARGI 165
Query: 210 HVTVISTSPSKEKEAKELLGADEFILST------NAMQMQAGKRTLDFILDTVSAKHSLG 263
+V + + E + L ++ST + ++ AG + LD+V K G
Sbjct: 166 NVINLVRRDAGVAELRAL--GIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGK-LAG 222
Query: 264 PILELLKVNGTLSVVGA-PEAPFELPSFPLIFGKRSVKGSMTGGMRETQEM 313
+L LL GTL G+ P ++ S LIF + +V+G GG R +QEM
Sbjct: 223 ELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRG-FWGG-RWSQEM 271
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324 |
| >gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 2e-05
Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 37/156 (23%)
Query: 70 GHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWD 129
G E G+++KVGS VK+ KVGDR Y
Sbjct: 62 GTEAAGVVSKVGSGVKHIKVGDRVV--------------------YAQS----------- 90
Query: 130 GSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIG 189
G YS + +P+ I+ + AA G+TV+ ++ I P ++ +
Sbjct: 91 ---ALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEI-KPDEQFLF 146
Query: 190 IVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAK 225
GG+G +A ++ KA G +I T S +K +
Sbjct: 147 HAAAGGVGLIACQWAKALGAK--LIGTVGSAQKAQR 180
|
Length = 327 |
| >gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 12/119 (10%)
Query: 194 GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI----LSTNAMQMQAGKRTL 249
G +G V + K G V I+ K E LG D I +A + +
Sbjct: 161 GAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGI 220
Query: 250 DFILDTVSAKHSLGPILELLKVNGTLSVVGA------PEAPFELPSFPLIFGKR-SVKG 301
D + V + L +L LL + + V GA PE P PL+ KR V+G
Sbjct: 221 DVYFENVGGEV-LDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQG 278
|
Length = 340 |
| >gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 6e-05
Identities = 63/289 (21%), Positives = 101/289 (34%), Gaps = 73/289 (25%)
Query: 39 VTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDR--AAVG 96
V I++ G+ ++I + +P V G E G + + F G R A+G
Sbjct: 30 VLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPGG--TFTPGQRVATAMG 87
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENI- 155
+ T++G Y+E + V + ++
Sbjct: 88 GM---------------------GRTFDG----------SYAEYTLVPNEQVYAIDSDLS 116
Query: 156 -AMDAAAP--------------LLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVA 200
A AA P L G T+ LI G +G A
Sbjct: 117 WAELAALPETYYTAWGSLFRSLGLQPGDTL--------LIRG---------GTSSVGLAA 159
Query: 201 VKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM--QMQAGKRTLDFILDTVSA 258
+K KA G VT + SP + KE LGADE ++ A+ Q++A D +L+ V
Sbjct: 160 LKLAKALGATVTATTRSPERAALLKE-LGADEVVIDDGAIAEQLRAAPGGFDKVLELVGT 218
Query: 259 KHSLGPILELLKVNGTLSVVGAPEAPFELPSF-PLIFGKRSVKGSMTGG 306
+L L L+ G + + G + L F P+ V ++TG
Sbjct: 219 A-TLKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGS 266
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320 |
| >gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 13/171 (7%)
Query: 135 GGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL- 193
G ++E++ ++ +P+ ++ AA L AG+T ++ + +R+ + G
Sbjct: 86 GAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL---LGRRVLVTGAS 142
Query: 194 GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFIL 253
GG+G AV+ G HV + SP++ + +EL A+ + + + +D ++
Sbjct: 143 GGVGRFAVQLAALAGAHVVAVVGSPARAEGLRELGAAEVVVGGS-----ELSGAPVDLVV 197
Query: 254 DTVSAKHSLGPILELLKVNGTLSVVGAP---EAPFELPSFPLIFGKRSVKG 301
D+V L LELL GT+ VG+ A F +F G R +
Sbjct: 198 DSVGGP-QLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYT 247
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305 |
| >gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 33 ENGVNDVTIKILYCGICHTDIHHVKNDWGI-----TMYPVVPGHEITGIITKVGSNVKNF 87
N+V +K+L I DI+ ++ + I P V G+E G + KVGS VK+
Sbjct: 26 PGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGSGVKSL 85
Query: 88 KVGDR 92
K GD
Sbjct: 86 KPGDW 90
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341 |
| >gnl|CDD|235800 PRK06436, PRK06436, glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 7e-04
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 10/72 (13%)
Query: 174 MKDNNLIDSPAK----KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKE------KE 223
MK+ N SP K K +GI+G GG+G KAFG ++ + S + E
Sbjct: 107 MKNGNFKQSPTKLLYNKSLGILGYGGIGRRVALLAKAFGMNIYAYTRSYVNDGISSIYME 166
Query: 224 AKELLGADEFIL 235
++++ +F+L
Sbjct: 167 PEDIMKKSDFVL 178
|
Length = 303 |
| >gnl|CDD|240646 cd12169, PGDH_like_1, Putative D-3-Phosphoglycerate Dehydrogenases | Back alignment and domain information |
|---|
Score = 39.8 bits (94), Expect = 0.001
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL 227
K +GIVGLG +G + G+AFG V S++ + E+ A
Sbjct: 143 KTLGIVGLGRIGARVARIGQAFGMRVIAWSSNLTAER-AAAA 183
|
Phosphoglycerate dehydrogenases (PGDHs) catalyze the initial step in the biosynthesis of L-serine from D-3-phosphoglycerate. PGDHs come in 3 distinct structural forms, with this first group being related to 2-hydroxy acid dehydrogenases, sharing structural similarity to formate and glycerate dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily, which also include groups such as L-alanine dehydrogenase and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. Many, not all, members of this family are dimeric. Length = 308 |
| >gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.002
Identities = 53/204 (25%), Positives = 83/204 (40%), Gaps = 43/204 (21%)
Query: 38 DVTIKILYCGICHTDIHHVKNDWGITM-YPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
DVT+++ Y + + D + GI +P+VPG ++ G T V S+ FK GDR +
Sbjct: 29 DVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAG--TVVESSSPRFKPGDRVVL- 85
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTYNGIFWD-GSITYGGYSEMLVADYRFVVHVPENI 155
G W G +GGY++ ++V +PE +
Sbjct: 86 ---------------------------TG--WGVGERHWGGYAQRARVKADWLVPLPEGL 116
Query: 156 AMDAAAPLLCAGIT-VFCPMKDNNLID---SPAKKRIGIVGL-GGLGHVAVKFGKAFGHH 210
+ A + AG T + C M L D +P + + G GG+G VAV G+
Sbjct: 117 SARQAMAIGTAGFTAMLCVMA---LEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYE 173
Query: 211 VTVISTSPSKEKEAKELLGADEFI 234
V + P + + LGA E I
Sbjct: 174 VVASTGRPEEADYLRS-LGASEII 196
|
Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324 |
| >gnl|CDD|223189 COG0111, SerA, Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.003
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKE 226
K +GI+GLG +G K KAFG V +E+ +
Sbjct: 143 KTVGIIGLGRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVD 183
|
Length = 324 |
| >gnl|CDD|217244 pfam02826, 2-Hacid_dh_C, D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Score = 37.4 bits (88), Expect = 0.003
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEA 224
K +GI+GLG +G + KAFG V P E EA
Sbjct: 36 KTVGIIGLGRIGRAVARRLKAFGMKVIAYDRYPKAEAEA 74
|
This domain is inserted into the catalytic domain, the large dehydrogenase and D-lactate dehydrogenase families in SCOP. N-terminal portion of which is represented by family pfam00389. Length = 175 |
| >gnl|CDD|240642 cd12165, 2-Hacid_dh_6, Putative D-isomer specific 2-hydroxyacid dehydrogenases | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.004
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 186 KRIGIVGLGGLG-HVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE 232
K +GI+G G +G +A + KAFG V +S SP +++ A + +
Sbjct: 138 KTVGILGYGHIGREIA-RLLKAFGMRVIGVSRSPKEDEGADFVGTLSD 184
|
2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Length = 314 |
| >gnl|CDD|240625 cd05300, 2-Hacid_dh_1, Putative D-isomer specific 2-hydroxyacid dehydrogenase | Back alignment and domain information |
|---|
Score = 38.3 bits (90), Expect = 0.004
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 184 AKKRIGIVGLGGLG-HVAVKFGKAFGHHVTVISTSPSKEKEAK-ELLGADE 232
A K + IVGLG +G +A + KAFG V + S E+ DE
Sbjct: 133 AGKTVLIVGLGDIGREIARRA-KAFGMRVIGVRRSGRPAPPVVDEVYTPDE 182
|
2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomains but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Formate dehydrogenase (FDH) catalyzes the NAD+-dependent oxidation of formate ion to carbon dioxide with the concomitant reduction of NAD+ to NADH. FDHs of this family contain no metal ions or prosthetic groups. Catalysis occurs though direct transfer of the hydride ion to NAD+ without the stages of acid-base catalysis typically found in related dehydrogenases. FDHs are found in all methylotrophic microorganisms in energy production and in the stress responses of plants. Length = 313 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 360 | |||
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 100.0 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 100.0 | |
| KOG0024 | 354 | consensus Sorbitol dehydrogenase [Secondary metabo | 100.0 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 100.0 | |
| COG1062 | 366 | AdhC Zn-dependent alcohol dehydrogenases, class II | 100.0 | |
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| PLN02514 | 357 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| TIGR02822 | 329 | adh_fam_2 zinc-binding alcohol dehydrogenase famil | 100.0 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 100.0 | |
| KOG0022 | 375 | consensus Alcohol dehydrogenase, class III [Second | 100.0 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 100.0 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 100.0 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 100.0 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 100.0 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 100.0 | |
| PLN02827 | 378 | Alcohol dehydrogenase-like | 100.0 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 100.0 | |
| COG1063 | 350 | Tdh Threonine dehydrogenase and related Zn-depende | 100.0 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 100.0 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 100.0 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 100.0 | |
| KOG1197 | 336 | consensus Predicted quinone oxidoreductase [Energy | 100.0 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 100.0 | |
| cd08277 | 365 | liver_alcohol_DH_like Liver alcohol dehydrogenase. | 100.0 | |
| TIGR02819 | 393 | fdhA_non_GSH formaldehyde dehydrogenase, glutathio | 100.0 | |
| PRK10309 | 347 | galactitol-1-phosphate dehydrogenase; Provisional | 100.0 | |
| cd08296 | 333 | CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci | 100.0 | |
| cd08237 | 341 | ribitol-5-phosphate_DH ribitol-5-phosphate dehydro | 100.0 | |
| cd05283 | 337 | CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam | 100.0 | |
| cd08231 | 361 | MDR_TM0436_like Hypothetical enzyme TM0436 resembl | 100.0 | |
| cd08233 | 351 | butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog | 100.0 | |
| TIGR01202 | 308 | bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl | 100.0 | |
| cd08285 | 351 | NADP_ADH NADP(H)-dependent alcohol dehydrogenases. | 100.0 | |
| cd05284 | 340 | arabinose_DH_like D-arabinose dehydrogenase. This | 100.0 | |
| PRK10083 | 339 | putative oxidoreductase; Provisional | 100.0 | |
| cd08299 | 373 | alcohol_DH_class_I_II_IV class I, II, IV alcohol d | 100.0 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 100.0 | |
| PRK09422 | 338 | ethanol-active dehydrogenase/acetaldehyde-active r | 100.0 | |
| cd08278 | 365 | benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be | 100.0 | |
| cd08246 | 393 | crotonyl_coA_red crotonyl-CoA reductase. Crotonyl- | 100.0 | |
| cd08283 | 386 | FDH_like_1 Glutathione-dependent formaldehyde dehy | 100.0 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 100.0 | |
| cd08240 | 350 | 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy | 100.0 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 100.0 | |
| cd05278 | 347 | FDH_like Formaldehyde dehydrogenases. Formaldehyde | 100.0 | |
| cd08297 | 341 | CAD3 Cinnamyl alcohol dehydrogenases (CAD). These | 100.0 | |
| TIGR01751 | 398 | crot-CoA-red crotonyl-CoA reductase. The enzyme mo | 100.0 | |
| cd08260 | 345 | Zn_ADH6 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| PRK13771 | 334 | putative alcohol dehydrogenase; Provisional | 100.0 | |
| cd05279 | 365 | Zn_ADH1 Liver alcohol dehydrogenase and related zi | 100.0 | |
| cd08245 | 330 | CAD Cinnamyl alcohol dehydrogenases (CAD) and rela | 100.0 | |
| cd08298 | 329 | CAD2 Cinnamyl alcohol dehydrogenases (CAD). These | 100.0 | |
| cd08279 | 363 | Zn_ADH_class_III Class III alcohol dehydrogenase. | 100.0 | |
| cd08256 | 350 | Zn_ADH2 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08286 | 345 | FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik | 100.0 | |
| KOG0025 | 354 | consensus Zn2+-binding dehydrogenase (nuclear rece | 100.0 | |
| cd08254 | 338 | hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo | 100.0 | |
| cd08282 | 375 | PFDH_like Pseudomonas putida aldehyde-dismutating | 100.0 | |
| cd08261 | 337 | Zn_ADH7 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08263 | 367 | Zn_ADH10 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08242 | 319 | MDR_like Medium chain dehydrogenases/reductase (MD | 100.0 | |
| cd08232 | 339 | idonate-5-DH L-idonate 5-dehydrogenase. L-idonate | 100.0 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 100.0 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08264 | 325 | Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam | 100.0 | |
| PRK05396 | 341 | tdh L-threonine 3-dehydrogenase; Validated | 100.0 | |
| cd08284 | 344 | FDH_like_2 Glutathione-dependent formaldehyde dehy | 100.0 | |
| cd08287 | 345 | FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik | 100.0 | |
| cd08235 | 343 | iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ | 100.0 | |
| cd05285 | 343 | sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a | 100.0 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 100.0 | |
| PLN02702 | 364 | L-idonate 5-dehydrogenase | 100.0 | |
| cd08274 | 350 | MDR9 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08265 | 384 | Zn_ADH3 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08262 | 341 | Zn_ADH8 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 100.0 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 100.0 | |
| cd08236 | 343 | sugar_DH NAD(P)-dependent sugar dehydrogenases. Th | 100.0 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 100.0 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 100.0 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 100.0 | |
| TIGR00692 | 340 | tdh L-threonine 3-dehydrogenase. E. coli His-90 mo | 100.0 | |
| TIGR02817 | 336 | adh_fam_1 zinc-binding alcohol dehydrogenase famil | 100.0 | |
| cd08258 | 306 | Zn_ADH4 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd05281 | 341 | TDH Threonine dehydrogenase. L-threonine dehydroge | 100.0 | |
| PRK10754 | 327 | quinone oxidoreductase, NADPH-dependent; Provision | 100.0 | |
| cd08234 | 334 | threonine_DH_like L-threonine dehydrogenase. L-thr | 100.0 | |
| cd08290 | 341 | ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi | 100.0 | |
| cd05280 | 325 | MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone | 100.0 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 100.0 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 100.0 | |
| cd08270 | 305 | MDR4 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08276 | 336 | MDR7 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| TIGR02823 | 323 | oxido_YhdH putative quinone oxidoreductase, YhdH/Y | 100.0 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 100.0 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 100.0 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 100.0 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 100.0 | |
| cd08249 | 339 | enoyl_reductase_like enoyl_reductase_like. Member | 100.0 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 100.0 | |
| cd08252 | 336 | AL_MDR Arginate lyase and other MDR family members | 100.0 | |
| cd08269 | 312 | Zn_ADH9 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08288 | 324 | MDR_yhdh Yhdh putative quinone oxidoreductases. Yh | 100.0 | |
| cd08248 | 350 | RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu | 100.0 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 100.0 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 100.0 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 100.0 | |
| cd08273 | 331 | MDR8 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08272 | 326 | MDR6 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd05286 | 320 | QOR2 Quinone oxidoreductase (QOR). Quinone oxidore | 100.0 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 100.0 | |
| cd08247 | 352 | AST1_like AST1 is a cytoplasmic protein associated | 100.0 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 100.0 | |
| cd05289 | 309 | MDR_like_2 alcohol dehydrogenase and quinone reduc | 100.0 | |
| cd08271 | 325 | MDR5 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 100.0 | |
| cd08267 | 319 | MDR1 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 100.0 | |
| cd08251 | 303 | polyketide_synthase polyketide synthase. Polyketid | 100.0 | |
| cd08275 | 337 | MDR3 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd05195 | 293 | enoyl_red enoyl reductase of polyketide synthase. | 99.97 | |
| smart00829 | 288 | PKS_ER Enoylreductase. Enoylreductase in Polyketid | 99.97 | |
| cd08255 | 277 | 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_ | 99.96 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 99.96 | |
| KOG1196 | 343 | consensus Predicted NAD-dependent oxidoreductase [ | 99.95 | |
| PF08240 | 109 | ADH_N: Alcohol dehydrogenase GroES-like domain; In | 99.9 | |
| PF00107 | 130 | ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: | 99.73 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 99.52 | |
| PF13602 | 127 | ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ | 99.46 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 99.42 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 98.68 | |
| PRK11873 | 272 | arsM arsenite S-adenosylmethyltransferase; Reviewe | 98.65 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 98.63 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 98.59 | |
| PLN02494 | 477 | adenosylhomocysteinase | 98.44 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 98.42 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 98.42 | |
| PRK12771 | 564 | putative glutamate synthase (NADPH) small subunit; | 98.21 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 98.19 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 98.17 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 98.13 | |
| PRK00517 | 250 | prmA ribosomal protein L11 methyltransferase; Revi | 98.11 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 98.1 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 98.1 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 98.1 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 98.08 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.98 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 97.91 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 97.89 | |
| COG2518 | 209 | Pcm Protein-L-isoaspartate carboxylmethyltransfera | 97.74 | |
| COG0686 | 371 | Ald Alanine dehydrogenase [Amino acid transport an | 97.69 | |
| PF12847 | 112 | Methyltransf_18: Methyltransferase domain; PDB: 3G | 97.65 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 97.64 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 97.63 | |
| PRK00377 | 198 | cbiT cobalt-precorrin-6Y C(15)-methyltransferase; | 97.6 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 97.59 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.56 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 97.55 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 97.54 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 97.52 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 97.51 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 97.49 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.49 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 97.48 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 97.45 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 97.45 | |
| COG2242 | 187 | CobL Precorrin-6B methylase 2 [Coenzyme metabolism | 97.45 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 97.39 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 97.34 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 97.33 | |
| PF11017 | 314 | DUF2855: Protein of unknown function (DUF2855); In | 97.33 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 97.29 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 97.28 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 97.28 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 97.27 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.27 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 97.23 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 97.21 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 97.2 | |
| TIGR01318 | 467 | gltD_gamma_fam glutamate synthase small subunit fa | 97.19 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 97.17 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 97.16 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 97.15 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 97.15 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.15 | |
| TIGR00406 | 288 | prmA ribosomal protein L11 methyltransferase. Ribo | 97.13 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 97.13 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 97.13 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 97.12 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.12 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.11 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 97.11 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 97.1 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 97.07 | |
| PF02353 | 273 | CMAS: Mycolic acid cyclopropane synthetase; InterP | 97.07 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.06 | |
| PF01135 | 209 | PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl | 97.06 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 97.06 | |
| PRK13943 | 322 | protein-L-isoaspartate O-methyltransferase; Provis | 97.06 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 97.05 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 97.04 | |
| PRK03369 | 488 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.03 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 97.03 | |
| PRK11705 | 383 | cyclopropane fatty acyl phospholipid synthase; Pro | 97.02 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 97.02 | |
| TIGR02469 | 124 | CbiT precorrin-6Y C5,15-methyltransferase (decarbo | 97.01 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 97.01 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 97.01 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 96.98 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 96.96 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 96.96 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 96.94 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.94 | |
| PRK13942 | 212 | protein-L-isoaspartate O-methyltransferase; Provis | 96.94 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 96.93 | |
| PRK08618 | 325 | ornithine cyclodeaminase; Validated | 96.93 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 96.92 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.92 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.89 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 96.89 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 96.89 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 96.88 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.87 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 96.87 | |
| COG2226 | 238 | UbiE Methylase involved in ubiquinone/menaquinone | 96.87 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 96.87 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 96.86 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 96.85 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 96.85 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 96.85 | |
| PRK04457 | 262 | spermidine synthase; Provisional | 96.83 | |
| PRK12809 | 639 | putative oxidoreductase Fe-S binding subunit; Revi | 96.82 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 96.81 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.81 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 96.8 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 96.8 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 96.8 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.79 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.77 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 96.76 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 96.76 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 96.76 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 96.75 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 96.74 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 96.73 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 96.73 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 96.72 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 96.72 | |
| PRK10258 | 251 | biotin biosynthesis protein BioC; Provisional | 96.72 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 96.71 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.69 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.69 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.68 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 96.67 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 96.67 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 96.66 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.66 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 96.66 | |
| PRK13944 | 205 | protein-L-isoaspartate O-methyltransferase; Provis | 96.65 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 96.65 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 96.65 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 96.64 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 96.64 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 96.63 | |
| TIGR00080 | 215 | pimt protein-L-isoaspartate(D-aspartate) O-methylt | 96.62 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 96.62 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 96.61 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.61 | |
| TIGR02992 | 326 | ectoine_eutC ectoine utilization protein EutC. Mem | 96.61 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 96.6 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 96.6 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 96.59 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 96.58 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 96.58 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 96.57 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 96.56 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.56 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.56 | |
| PRK05717 | 255 | oxidoreductase; Validated | 96.55 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 96.54 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 96.54 | |
| PRK14176 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.54 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 96.53 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 96.52 | |
| cd05311 | 226 | NAD_bind_2_malic_enz NAD(P) binding domain of mali | 96.51 | |
| COG1648 | 210 | CysG Siroheme synthase (precorrin-2 oxidase/ferroc | 96.51 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 96.51 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 96.5 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 96.49 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 96.49 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 96.48 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 96.48 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 96.48 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 96.47 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 96.45 | |
| PRK14178 | 279 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.44 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 96.43 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 96.43 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.43 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 96.43 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 96.41 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 96.41 | |
| COG2227 | 243 | UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- | 96.4 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 96.4 | |
| PRK06141 | 314 | ornithine cyclodeaminase; Validated | 96.39 | |
| PRK08643 | 256 | acetoin reductase; Validated | 96.37 | |
| PRK07340 | 304 | ornithine cyclodeaminase; Validated | 96.37 | |
| PRK14177 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.36 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 96.36 | |
| PRK14180 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.36 | |
| PRK14179 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.35 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 96.35 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 96.34 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 96.31 | |
| COG2264 | 300 | PrmA Ribosomal protein L11 methylase [Translation, | 96.31 | |
| PRK14172 | 278 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.3 | |
| TIGR03840 | 213 | TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d | 96.3 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 96.3 | |
| COG2230 | 283 | Cfa Cyclopropane fatty acid synthase and related m | 96.3 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 96.3 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 96.29 | |
| PRK05562 | 223 | precorrin-2 dehydrogenase; Provisional | 96.29 | |
| PRK14190 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.28 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 96.28 | |
| PF01408 | 120 | GFO_IDH_MocA: Oxidoreductase family, NAD-binding R | 96.26 | |
| PRK08317 | 241 | hypothetical protein; Provisional | 96.25 | |
| PLN02928 | 347 | oxidoreductase family protein | 96.25 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 96.24 | |
| PRK12769 | 654 | putative oxidoreductase Fe-S binding subunit; Revi | 96.24 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 96.24 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 96.24 | |
| COG2423 | 330 | Predicted ornithine cyclodeaminase, mu-crystallin | 96.24 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 96.23 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 96.23 | |
| PLN03075 | 296 | nicotianamine synthase; Provisional | 96.2 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 96.2 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 96.2 | |
| PRK14967 | 223 | putative methyltransferase; Provisional | 96.19 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 96.18 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 96.18 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 96.17 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 96.17 | |
| COG1052 | 324 | LdhA Lactate dehydrogenase and related dehydrogena | 96.16 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 96.16 | |
| PF02670 | 129 | DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re | 96.15 | |
| PRK05447 | 385 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; P | 96.14 | |
| PRK08291 | 330 | ectoine utilization protein EutC; Validated | 96.14 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 96.13 | |
| PRK00811 | 283 | spermidine synthase; Provisional | 96.12 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 96.12 | |
| PLN02366 | 308 | spermidine synthase | 96.12 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 96.11 | |
| PRK11207 | 197 | tellurite resistance protein TehB; Provisional | 96.11 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.11 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 96.11 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 96.1 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 96.1 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 96.1 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 96.09 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 96.09 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 96.09 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 96.08 | |
| PTZ00098 | 263 | phosphoethanolamine N-methyltransferase; Provision | 96.07 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 96.07 | |
| PRK14169 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.07 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 96.06 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 96.06 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 96.05 | |
| PLN02516 | 299 | methylenetetrahydrofolate dehydrogenase (NADP+) | 96.05 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 96.05 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 96.04 | |
| PRK14173 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.03 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 96.03 | |
| COG3288 | 356 | PntA NAD/NADP transhydrogenase alpha subunit [Ener | 96.02 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 96.01 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 96.01 | |
| PRK14186 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.01 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.0 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 95.99 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 95.98 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 95.97 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.97 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 95.97 | |
| PRK13255 | 218 | thiopurine S-methyltransferase; Reviewed | 95.96 | |
| PRK14183 | 281 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.96 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 95.95 | |
| COG0673 | 342 | MviM Predicted dehydrogenases and related proteins | 95.95 | |
| PRK14166 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.94 | |
| PLN02233 | 261 | ubiquinone biosynthesis methyltransferase | 95.94 | |
| PRK14170 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.93 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 95.93 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 95.92 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 95.92 | |
| TIGR00417 | 270 | speE spermidine synthase. the SpeE subunit of sper | 95.92 | |
| PRK11036 | 255 | putative S-adenosyl-L-methionine-dependent methylt | 95.92 | |
| PRK07402 | 196 | precorrin-6B methylase; Provisional | 95.92 | |
| PRK14187 | 294 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.9 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 95.87 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 95.87 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 95.86 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 95.85 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 95.84 | |
| COG0334 | 411 | GdhA Glutamate dehydrogenase/leucine dehydrogenase | 95.83 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 95.83 | |
| COG0111 | 324 | SerA Phosphoglycerate dehydrogenase and related de | 95.83 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 95.82 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 95.82 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 95.81 | |
| PRK08410 | 311 | 2-hydroxyacid dehydrogenase; Provisional | 95.81 | |
| PF01209 | 233 | Ubie_methyltran: ubiE/COQ5 methyltransferase famil | 95.81 | |
| PRK14184 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.81 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 95.78 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 95.78 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 95.76 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 95.76 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 95.74 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 95.74 | |
| PF02558 | 151 | ApbA: Ketopantoate reductase PanE/ApbA; InterPro: | 95.74 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 95.73 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 95.73 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 95.72 | |
| PRK14185 | 293 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.72 | |
| PRK14171 | 288 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.72 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 95.7 | |
| PRK01683 | 258 | trans-aconitate 2-methyltransferase; Provisional | 95.68 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 95.67 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 95.66 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 95.65 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 95.65 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 95.65 | |
| PRK14182 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.65 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 95.64 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.64 | |
| PLN02897 | 345 | tetrahydrofolate dehydrogenase/cyclohydrolase, put | 95.64 | |
| PF07991 | 165 | IlvN: Acetohydroxy acid isomeroreductase, catalyti | 95.64 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 95.62 | |
| COG0499 | 420 | SAM1 S-adenosylhomocysteine hydrolase [Coenzyme me | 95.62 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 95.62 | |
| PLN02244 | 340 | tocopherol O-methyltransferase | 95.61 | |
| PRK14167 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.61 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 95.6 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 95.59 | |
| PLN02616 | 364 | tetrahydrofolate dehydrogenase/cyclohydrolase, put | 95.59 | |
| cd01079 | 197 | NAD_bind_m-THF_DH NAD binding domain of methylene- | 95.59 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 95.58 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 95.58 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.57 | |
| PRK14193 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.57 | |
| PF08241 | 95 | Methyltransf_11: Methyltransferase domain; InterPr | 95.56 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 95.56 | |
| PRK00107 | 187 | gidB 16S rRNA methyltransferase GidB; Reviewed | 95.56 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.55 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 95.54 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 95.5 | |
| PRK14181 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.5 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 95.49 | |
| COG2519 | 256 | GCD14 tRNA(1-methyladenosine) methyltransferase an | 95.49 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 95.47 | |
| COG0190 | 283 | FolD 5,10-methylene-tetrahydrofolate dehydrogenase | 95.47 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.46 | |
| COG0421 | 282 | SpeE Spermidine synthase [Amino acid transport and | 95.46 | |
| PRK06436 | 303 | glycerate dehydrogenase; Provisional | 95.46 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 95.46 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 95.46 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 95.46 | |
| PF06325 | 295 | PrmA: Ribosomal protein L11 methyltransferase (Prm | 95.45 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 95.45 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 95.45 | |
| PRK06823 | 315 | ornithine cyclodeaminase; Validated | 95.44 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.44 | |
| PRK14168 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.43 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 95.42 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 95.41 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 95.41 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.41 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 95.4 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 95.4 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 95.39 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 95.39 | |
| PRK00312 | 212 | pcm protein-L-isoaspartate O-methyltransferase; Re | 95.37 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.36 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 95.35 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 95.34 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 95.33 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.32 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 95.31 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 95.31 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 95.31 | |
| PRK13302 | 271 | putative L-aspartate dehydrogenase; Provisional | 95.3 | |
| PRK05708 | 305 | 2-dehydropantoate 2-reductase; Provisional | 95.29 | |
| PRK01581 | 374 | speE spermidine synthase; Validated | 95.28 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 95.28 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.27 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 95.25 | |
| PLN02490 | 340 | MPBQ/MSBQ methyltransferase | 95.24 | |
| PRK10637 | 457 | cysG siroheme synthase; Provisional | 95.23 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 95.23 | |
| TIGR00438 | 188 | rrmJ cell division protein FtsJ. | 95.23 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 95.22 |
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-69 Score=477.23 Aligned_cols=332 Identities=40% Similarity=0.687 Sum_probs=306.2
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|||.++..++ ++++++|++.|+|+++||+|||+++|+|++|+|.++|.++...+|.++|||.+|+|+++|++|++||+
T Consensus 4 mkA~~~~~~~--~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k~ 81 (339)
T COG1064 4 MKAAVLKKFG--QPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLKV 81 (339)
T ss_pred eEEEEEccCC--CCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCCC
Confidence 6666665544 44999999999999999999999999999999999999998889999999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
||||.+.++..+|++|.+|++|+.++|++... .++..+|+|+||+++|+++++++|+++++++||++.|++.|
T Consensus 82 GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~-------~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT 154 (339)
T COG1064 82 GDRVGVGWLVISCGECEYCRSGNENLCPNQKI-------TGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGIT 154 (339)
T ss_pred CCEEEecCccCCCCCCccccCcccccCCCccc-------cceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeee
Confidence 99999978889999999999999999998433 33468999999999999999999999999999999999999
Q ss_pred hhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCc
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTL 249 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~ 249 (360)
.|++|++.. ++||++|+|+|+|++|++++|+||.+|++|+++++++++++.+++ +|++++++..+.+......+.+
T Consensus 155 ~y~alk~~~---~~pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-lGAd~~i~~~~~~~~~~~~~~~ 230 (339)
T COG1064 155 TYRALKKAN---VKPGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-LGADHVINSSDSDALEAVKEIA 230 (339)
T ss_pred EeeehhhcC---CCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-hCCcEEEEcCCchhhHHhHhhC
Confidence 999999866 669999999999999999999999999999999999999999999 9999999987555555554559
Q ss_pred CEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC-CC-cccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccce-
Q 018158 250 DFILDTVSAKHSLGPILELLKVNGTLSVVGAPE-AP-FELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNI- 326 (360)
Q Consensus 250 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i- 326 (360)
|+++|+++ ...++.+++.|+++|+++.+|... .. ..++.+.+..+++++.|+..+++.++++++++..++++++.+
T Consensus 231 d~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~Ikp~i~ 309 (339)
T COG1064 231 DAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFAAEGKIKPEIL 309 (339)
T ss_pred cEEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCceeeEE
Confidence 99999999 778999999999999999999984 44 457888899999999999999999999999999999999999
Q ss_pred EEECCccHHHHHHHHHcCCCceeEEEecC
Q 018158 327 EVIKPDQINEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 327 ~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
+.++++++++||++|++++..||.|+++.
T Consensus 310 e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 310 ETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred eeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 79999999999999999999999999875
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-64 Score=433.44 Aligned_cols=349 Identities=53% Similarity=0.948 Sum_probs=321.6
Q ss_pred CCCCCcccceeEEeccCCCC--CceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEe
Q 018158 3 QTTPNHTQSVVGWAAHDPSG--KITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKV 80 (360)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~v 80 (360)
+++|++ +. .|...+..+ ++++.+++.|+++++||+||++++|||++|+|.+.|.++..++|.++|||.+|+|+++
T Consensus 4 ~~~p~k-~~--g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~Vvkv 80 (360)
T KOG0023|consen 4 MSIPEK-QF--GWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKV 80 (360)
T ss_pred ccCchh-hE--EEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEE
Confidence 556766 44 455555555 7777999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCcccc
Q 018158 81 GSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAA 160 (360)
Q Consensus 81 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a 160 (360)
|++|+.|++||||-+-+...+|+.|++|..++.++|++....+.|....|...+|+||+|+++++.++++||+++.+++|
T Consensus 81 Gs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~a 160 (360)
T KOG0023|consen 81 GSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASA 160 (360)
T ss_pred CCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhc
Confidence 99999999999999999999999999999999999999989999999999999999999999999999999999999999
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCc-cH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILST-NA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~-~~ 239 (360)
|++.|++.|.|.+|.+.+ +.||+++-|.|+|++|.+++|+||++|.+|++++++..+++.+.+.||++..++.. +.
T Consensus 161 APlLCaGITvYspLk~~g---~~pG~~vgI~GlGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~ 237 (360)
T KOG0023|consen 161 APLLCAGITVYSPLKRSG---LGPGKWVGIVGLGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDP 237 (360)
T ss_pred cchhhcceEEeehhHHcC---CCCCcEEEEecCcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCH
Confidence 999999999999999988 77999999999977999999999999999999999986666666669999999888 66
Q ss_pred HHHHhcCCCcCEEEEcCC--CcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHH
Q 018158 240 MQMQAGKRTLDFILDTVS--AKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVC 317 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l 317 (360)
+..+++.+-.|.+++++. ....+..++++++.+|++|.+|.+...+.++.+++..+.+.+.||..+.+.+.++++++.
T Consensus 238 d~~~~~~~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~Ldf~ 317 (360)
T KOG0023|consen 238 DIMKAIMKTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEALDFV 317 (360)
T ss_pred HHHHHHHHhhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHHHHHHH
Confidence 666666666677777776 666789999999999999999999889999999999999999999999999999999999
Q ss_pred hcCCCccceEEECCccHHHHHHHHHcCCCceeEEEecCCC
Q 018158 318 GKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIAGG 357 (360)
Q Consensus 318 ~~~~l~~~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~ 357 (360)
+++.++.+++..+++++++||++|.+++..+|.|+++..+
T Consensus 318 a~~~ik~~IE~v~~~~v~~a~erm~kgdV~yRfVvD~s~~ 357 (360)
T KOG0023|consen 318 ARGLIKSPIELVKLSEVNEAYERMEKGDVRYRFVVDVSKS 357 (360)
T ss_pred HcCCCcCceEEEehhHHHHHHHHHHhcCeeEEEEEEcccc
Confidence 9999999999999999999999999999999999999765
|
|
| >KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-57 Score=387.59 Aligned_cols=331 Identities=21% Similarity=0.322 Sum_probs=292.0
Q ss_pred cceeEEeccCCCCCceEEEEeCCCC-CCCeEEEEEeeeecccchhhhhccCCCC---CCCCCccccccceEEEEecCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRREN-GVNDVTIKILYCGICHTDIHHVKNDWGI---TMYPVVPGHEITGIITKVGSNVK 85 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~ 85 (360)
|+|.+| .+++++++++.|.|++ +|+||+|++.+++||.||+|++...... .+.|.++|||.+|+|+++|++|+
T Consensus 5 ~~A~vl---~g~~di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk 81 (354)
T KOG0024|consen 5 NLALVL---RGKGDIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK 81 (354)
T ss_pred cceeEE---EccCceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence 554444 4458999999999987 9999999999999999999999875532 34799999999999999999999
Q ss_pred CCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccc
Q 018158 86 NFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLC 165 (360)
Q Consensus 86 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~ 165 (360)
++|+||||++.+.. +|+.|++|+.|+||+|+...|..++ ..+|++++|+++++++++|+|++++++++|.+..
T Consensus 82 ~LkVGDrVaiEpg~-~c~~cd~CK~GrYNlCp~m~f~atp------p~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~eP 154 (354)
T KOG0024|consen 82 HLKVGDRVAIEPGL-PCRDCDFCKEGRYNLCPHMVFCATP------PVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEP 154 (354)
T ss_pred ccccCCeEEecCCC-ccccchhhhCcccccCCccccccCC------CcCCceEEEEEechHheeeCCCCCchhhcccccc
Confidence 99999999876654 8999999999999999998776665 6789999999999999999999999999987765
Q ss_pred hhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHH---H
Q 018158 166 AGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAM---Q 241 (360)
Q Consensus 166 ~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~---~ 241 (360)
+..+|||.++.. +++|+++||+|+|++|+.+...||.+|+ +|++++-.+.|++.+++ ||++.+.+....+ .
T Consensus 155 -LsV~~HAcr~~~---vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~-~Ga~~~~~~~~~~~~~~ 229 (354)
T KOG0024|consen 155 -LSVGVHACRRAG---VKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKK-FGATVTDPSSHKSSPQE 229 (354)
T ss_pred -hhhhhhhhhhcC---cccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHH-hCCeEEeeccccccHHH
Confidence 788899998877 7799999999999999999999999999 69999999999999999 9999887655532 2
Q ss_pred HHhc-----C-CCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHH
Q 018158 242 MQAG-----K-RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMN 315 (360)
Q Consensus 242 ~~~~-----~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 315 (360)
..+. + ..+|+.|||+|....++.++..++.+|+++.+|.-.....++......+++.+.|+..+...+|..+++
T Consensus 230 ~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~ 309 (354)
T KOG0024|consen 230 LAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIE 309 (354)
T ss_pred HHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHH
Confidence 1111 3 559999999999988999999999999999999888888999999999999999999999889999999
Q ss_pred HHhcCCC--ccce-EEECCccHHHHHHHHHcCCC-ceeEEEecC
Q 018158 316 VCGKYNI--TCNI-EVIKPDQINEALDRLARNDV-RYRFVIDIA 355 (360)
Q Consensus 316 ~l~~~~l--~~~i-~~~~~~~~~~a~~~~~~~~~-~gkvvi~~~ 355 (360)
++++|++ ++.| +.|+++++.+||+.+.+++. .-|+++...
T Consensus 310 li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~ 353 (354)
T KOG0024|consen 310 LVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGP 353 (354)
T ss_pred HHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCC
Confidence 9999998 4556 99999999999999998774 348888764
|
|
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-55 Score=410.20 Aligned_cols=347 Identities=59% Similarity=1.066 Sum_probs=298.5
Q ss_pred CcccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCC
Q 018158 7 NHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKN 86 (360)
Q Consensus 7 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 86 (360)
.++||+.++...+.++.+++.+++.|+|+++||+|||.+++||++|++.+.|.++...+|.++|||++|+|+++|++|++
T Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~ 87 (360)
T PLN02586 8 EHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKK 87 (360)
T ss_pred hchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCc
Confidence 34799999999988899999999999999999999999999999999999887654467899999999999999999999
Q ss_pred CCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccch
Q 018158 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCA 166 (360)
Q Consensus 87 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~ 166 (360)
|++||+|++.+...+|+.|.+|..|.+++|++..+.+.+....|...+|+|+||+.+++++++++|+++++++++++++.
T Consensus 88 ~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~ 167 (360)
T PLN02586 88 FKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCA 167 (360)
T ss_pred cCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcc
Confidence 99999998767667899999999999999998543322111112234799999999999999999999999999999999
Q ss_pred hhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcC
Q 018158 167 GITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGK 246 (360)
Q Consensus 167 ~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~ 246 (360)
+.|+|+++......+ +|++|+|.|+|++|++++|+||.+|++|++++.+++++..+.+++|+++++++.+.+......
T Consensus 168 ~~ta~~al~~~~~~~--~g~~VlV~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~ 245 (360)
T PLN02586 168 GITVYSPMKYYGMTE--PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAAI 245 (360)
T ss_pred hHHHHHHHHHhcccC--CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHhhc
Confidence 999999987665544 899999999999999999999999999998887777665554449999999876654444443
Q ss_pred CCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccce
Q 018158 247 RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNI 326 (360)
Q Consensus 247 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i 326 (360)
.++|++||++|....+..++++++++|+++.+|.......++...++.++..+.++..+..++++++++++.+|++++.+
T Consensus 246 ~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~ 325 (360)
T PLN02586 246 GTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGIKETQEMLDFCAKHNITADI 325 (360)
T ss_pred CCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCHHHHHHHHHHHHhCCCCCcE
Confidence 47999999999866788999999999999999976555566777777788888888887788899999999999999877
Q ss_pred EEECCccHHHHHHHHHcCCCceeEEEecC
Q 018158 327 EVIKPDQINEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 327 ~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
++|+|+|+++|++.+.+++..||+|+++.
T Consensus 326 ~~~~l~~~~~A~~~~~~~~~~gkvvi~~~ 354 (360)
T PLN02586 326 ELIRMDEINTAMERLAKSDVRYRFVIDVA 354 (360)
T ss_pred EEEeHHHHHHHHHHHHcCCCcEEEEEEcc
Confidence 89999999999999999998899999873
|
|
| >COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-56 Score=386.18 Aligned_cols=334 Identities=25% Similarity=0.398 Sum_probs=291.8
Q ss_pred EEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEE
Q 018158 14 GWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRA 93 (360)
Q Consensus 14 ~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 93 (360)
....++..++|+++|+++++|++|||+||+.++|+|++|.+.++|..+.. +|.++|||++|+|++||++|+++|+||+|
T Consensus 5 aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkpGDhV 83 (366)
T COG1062 5 AAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKPGDHV 83 (366)
T ss_pred EeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCCCCEE
Confidence 34445678999999999999999999999999999999999999999655 99999999999999999999999999999
Q ss_pred EeccCccCCCCChhhhCCCCCCccccccc-ccccccCCC-------------ccccceeeEEEeecceeEECCCCCCccc
Q 018158 94 AVGCLAAACMECEFCKDSQENYCDKIQFT-YNGIFWDGS-------------ITYGGYSEMLVADYRFVVHVPENIAMDA 159 (360)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~g~~~~~~-------------~~~g~~~~~~~v~~~~~~~iP~~~~~~~ 159 (360)
+ ..+.+.|+.|.+|.+|.+++|...... ..|.+..|. ...++|++|.++++.+++|++++.+++.
T Consensus 84 I-~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p~~~ 162 (366)
T COG1062 84 I-LLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEK 162 (366)
T ss_pred E-EcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCCCccc
Confidence 5 578899999999999999999975433 444444432 1235899999999999999999999999
Q ss_pred cccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCcc
Q 018158 160 AAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTN 238 (360)
Q Consensus 160 aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~ 238 (360)
++.+.|...|.+-+.....+.+ +|+++.|+|.|++|++++|-|+..|+ ++++++.+++|++++++ ||+++++|.++
T Consensus 163 a~llGCgV~TG~Gav~nta~v~--~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~-fGAT~~vn~~~ 239 (366)
T COG1062 163 ACLLGCGVTTGIGAVVNTAKVE--PGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKK-FGATHFVNPKE 239 (366)
T ss_pred eEEEeeeeccChHHhhhcccCC--CCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHh-cCCceeecchh
Confidence 9999999999999988888766 99999999999999999999999999 69999999999999999 99999999987
Q ss_pred HH-H---HHhc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC--CcccChhhHhccCcEEEEeecC---CHH
Q 018158 239 AM-Q---MQAG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA--PFELPSFPLIFGKRSVKGSMTG---GMR 308 (360)
Q Consensus 239 ~~-~---~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~---~~~ 308 (360)
.. - .... ..++|++|||+|....+++++++.+++|+.+.+|.... .++.+...+... .+|.|+..+ .+.
T Consensus 240 ~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs~~G~~~p~~ 318 (366)
T COG1062 240 VDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RVWKGSAFGGARPRS 318 (366)
T ss_pred hhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ceEEEEeecCCcccc
Confidence 63 2 2223 45999999999999999999999999999999998764 445556666555 999999886 367
Q ss_pred HHHHHHHHHhcCCCcc--ce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 309 ETQEMMNVCGKYNITC--NI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 309 ~~~~~~~~l~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
++.+++++..+|+++. .+ ++++|+|+++||+.|.+++.. |.||.+
T Consensus 319 diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~~ 366 (366)
T COG1062 319 DIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIRF 366 (366)
T ss_pred chhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEecC
Confidence 8999999999999864 45 899999999999999999987 666653
|
|
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-53 Score=398.07 Aligned_cols=344 Identities=54% Similarity=1.008 Sum_probs=293.4
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
.+|.++..+++++.+++.+++.|+|+++||+|||.+++||++|++.+.|.++...+|.++|||++|+|+++|+++++|++
T Consensus 5 ~~a~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~v 84 (375)
T PLN02178 5 NKAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKE 84 (375)
T ss_pred ceeEEEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCC
Confidence 45667777788789999999999999999999999999999999999887644456889999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
||||++.+...+|+.|.+|..|++++|++..+...+....|...+|+|+||+.+++++++++|+++++++++++++...|
T Consensus 85 GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~t 164 (375)
T PLN02178 85 GDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGIT 164 (375)
T ss_pred CCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchH
Confidence 99998766666799999999999999998543221111112234799999999999999999999999999999999999
Q ss_pred hhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhH-HHHHHHHcCCCeEeeCccHHHHHhcCCC
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSK-EKEAKELLGADEFILSTNAMQMQAGKRT 248 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~-~~~~~~~~g~~~~v~~~~~~~~~~~~~~ 248 (360)
+|+++...... .++|++|+|.|+|++|++++|+||.+|++|+++++++++ ++.+++ +|+++++++.+.+.......+
T Consensus 165 a~~al~~~~~~-~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~-lGa~~~i~~~~~~~v~~~~~~ 242 (375)
T PLN02178 165 VYSPMKYYGMT-KESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDR-LGADSFLVTTDSQKMKEAVGT 242 (375)
T ss_pred HHHHHHHhCCC-CCCCCEEEEEcccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHh-CCCcEEEcCcCHHHHHHhhCC
Confidence 99998765422 238999999999999999999999999999999877665 566666 999999987654333333347
Q ss_pred cCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccceEE
Q 018158 249 LDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIEV 328 (360)
Q Consensus 249 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i~~ 328 (360)
+|++|||+|....+..++++++++|+++.+|.......++...++.+++++.|+.....+++.++++++.+|++++.+++
T Consensus 243 ~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~i~~ 322 (375)
T PLN02178 243 MDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIEL 322 (375)
T ss_pred CcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhCCCcccEEE
Confidence 99999999987678999999999999999998765566777778889999999988888899999999999999988888
Q ss_pred ECCccHHHHHHHHHcCCCceeEEEecC
Q 018158 329 IKPDQINEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 329 ~~~~~~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
|+|+++++|++.+.+++..||+|++++
T Consensus 323 ~~l~~~~~A~~~~~~~~~~gkvvi~~~ 349 (375)
T PLN02178 323 IKMSDINSAMDRLAKSDVRYRFVIDVA 349 (375)
T ss_pred EeHHHHHHHHHHHHcCCCceEEEEEec
Confidence 999999999999999998899999983
|
|
| >PLN02514 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-52 Score=389.81 Aligned_cols=345 Identities=48% Similarity=0.919 Sum_probs=297.0
Q ss_pred ceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCC
Q 018158 11 SVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVG 90 (360)
Q Consensus 11 ~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 90 (360)
+...+....+.+.+++++++.|+|+++||+|||.++++|++|++.+.|.++...+|.++|||++|+|+++|+++++|++|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~G 88 (357)
T PLN02514 9 KTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVG 88 (357)
T ss_pred eEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccCC
Confidence 34455556777889999999999999999999999999999999998876444568899999999999999999999999
Q ss_pred CEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhh
Q 018158 91 DRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITV 170 (360)
Q Consensus 91 d~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta 170 (360)
|+|++.+....|+.|.+|..|.++.|.+..+.+.+....|...+|+|+||+.++.+.++++|+++++++++++++.+.||
T Consensus 89 d~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta 168 (357)
T PLN02514 89 DIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTV 168 (357)
T ss_pred CEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHHH
Confidence 99987777778999999999999999885332221111233457999999999999999999999999999999999999
Q ss_pred hchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcC
Q 018158 171 FCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLD 250 (360)
Q Consensus 171 ~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d 250 (360)
|+++......+ +|++++|+|+|++|++++|+||.+|++|++++++++++..+++++|+++++++.+.........++|
T Consensus 169 ~~al~~~~~~~--~g~~vlV~G~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~D 246 (357)
T PLN02514 169 YSPLSHFGLKQ--SGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEAADSLD 246 (357)
T ss_pred HHHHHHcccCC--CCCeEEEEcccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHHhcCCCc
Confidence 99998766544 8999999988999999999999999999999988888777765699988887665444444445799
Q ss_pred EEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccceEEEC
Q 018158 251 FILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIEVIK 330 (360)
Q Consensus 251 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~ 330 (360)
++||++|....+..++++++++|+++.+|.......++...++.+++++.++......++++++++++++++++.+++|+
T Consensus 247 ~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~~~i~~~~ 326 (357)
T PLN02514 247 YIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLEFCKEKGLTSMIEVVK 326 (357)
T ss_pred EEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHHHHHhCCCcCcEEEEc
Confidence 99999997667899999999999999999876556677777888999999998888889999999999999987778999
Q ss_pred CccHHHHHHHHHcCCCceeEEEecCCC
Q 018158 331 PDQINEALDRLARNDVRYRFVIDIAGG 357 (360)
Q Consensus 331 ~~~~~~a~~~~~~~~~~gkvvi~~~~~ 357 (360)
++++.+|++.+.+++..||++++++++
T Consensus 327 l~~~~~A~~~~~~~~~~gk~v~~~~~~ 353 (357)
T PLN02514 327 MDYVNTAFERLEKNDVRYRFVVDVAGS 353 (357)
T ss_pred HHHHHHHHHHHHcCCCceeEEEEcccc
Confidence 999999999999999889999998765
|
|
| >TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-51 Score=376.30 Aligned_cols=323 Identities=24% Similarity=0.410 Sum_probs=282.0
Q ss_pred EEeccCCC--CCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCC
Q 018158 14 GWAAHDPS--GKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGD 91 (360)
Q Consensus 14 ~~~~~~~~--~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 91 (360)
++..++++ ..++++++|.|+|+++||+|||+++++|++|++.+.|.++...+|.++|||++|+|+++|+++++|++||
T Consensus 3 ~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 82 (329)
T TIGR02822 3 EVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVGD 82 (329)
T ss_pred eeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCCC
Confidence 34445544 5799999999999999999999999999999999998765444578999999999999999999999999
Q ss_pred EEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhh
Q 018158 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVF 171 (360)
Q Consensus 92 ~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~ 171 (360)
+|++.+....|+.|.+|..|+++.|+...+ .| ...+|+|+||+.+++++++++|+++++++++++++.+.|||
T Consensus 83 ~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~--~g-----~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~ 155 (329)
T TIGR02822 83 RVGIAWLRRTCGVCRYCRRGAENLCPASRY--TG-----WDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGY 155 (329)
T ss_pred EEEEcCccCcCCCChHHhCcCcccCCCccc--CC-----cccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHH
Confidence 998877777899999999999999987543 23 24579999999999999999999999999999999999999
Q ss_pred chhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCE
Q 018158 172 CPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDF 251 (360)
Q Consensus 172 ~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~ 251 (360)
+++... . +++|++|+|+|+|++|++++|+|+.+|++|+++++++++++.+++ +|+++++++.+. ...++|+
T Consensus 156 ~~~~~~-~--~~~g~~VlV~G~g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~-~Ga~~vi~~~~~-----~~~~~d~ 226 (329)
T TIGR02822 156 RALLRA-S--LPPGGRLGLYGFGGSAHLTAQVALAQGATVHVMTRGAAARRLALA-LGAASAGGAYDT-----PPEPLDA 226 (329)
T ss_pred HHHHhc-C--CCCCCEEEEEcCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH-hCCceecccccc-----CcccceE
Confidence 999753 3 459999999999999999999999999999999999999999999 999999885432 1346899
Q ss_pred EEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccceEEEC
Q 018158 252 ILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIEVIK 330 (360)
Q Consensus 252 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~ 330 (360)
++++.+....+..++++++++|+++.+|.... ...++...++.+++++.++....++++.++++++.++++++..++|+
T Consensus 227 ~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~i~~~~~ 306 (329)
T TIGR02822 227 AILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGVRVTTHTYP 306 (329)
T ss_pred EEECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCCeeEEEEEe
Confidence 99988877788999999999999999997533 23456666778899999988777888999999999999986558999
Q ss_pred CccHHHHHHHHHcCCCceeEEE
Q 018158 331 PDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 331 ~~~~~~a~~~~~~~~~~gkvvi 352 (360)
|+++++|++.+.+++..||+|+
T Consensus 307 l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 307 LSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred HHHHHHHHHHHHcCCCceEEEe
Confidence 9999999999999999999987
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized. |
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-51 Score=380.05 Aligned_cols=338 Identities=22% Similarity=0.401 Sum_probs=284.7
Q ss_pred cceeEEeccCC------CCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCC
Q 018158 10 QSVVGWAAHDP------SGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSN 83 (360)
Q Consensus 10 ~~~~~~~~~~~------~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~ 83 (360)
|||+++..++. ++.+++++++.|+|+++||+|||.+++||++|++.+.|.+ +..+|.++|||++|+|+++|++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~-~~~~p~i~GhE~~G~V~~vG~~ 79 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDR-PRPLPMALGHEAAGVVVEVGEG 79 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCC-CCCCCccCCccceeEEEEeCCC
Confidence 57777776654 5889999999999999999999999999999999998876 3456899999999999999999
Q ss_pred CCCCCCCCEEEeccCccCCCCChhhhCCCCCCccccccc-ccccccCC-------------CccccceeeEEEeecceeE
Q 018158 84 VKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFT-YNGIFWDG-------------SITYGGYSEMLVADYRFVV 149 (360)
Q Consensus 84 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~g~~~~~-------------~~~~g~~~~~~~v~~~~~~ 149 (360)
+++|++||||++.+ ...|+.|.+|..|.++.|.+.... ..|....+ ....|+|+||+.+++++++
T Consensus 80 v~~~~~GdrV~~~~-~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 80 VTDLEVGDHVVLVF-VPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCcCCCCCEEEEcc-CCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceE
Confidence 99999999998744 347999999999999999875322 12221111 0123799999999999999
Q ss_pred ECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHc
Q 018158 150 HVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELL 228 (360)
Q Consensus 150 ~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~ 228 (360)
++|+++++++++++++.+.|||+++.....++ +|++|+|.|+|++|++++|+||.+|+ +|+++++++++++.+++ +
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~--~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~-~ 235 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVR--PGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARE-L 235 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHH-c
Confidence 99999999999999999999999986655544 99999999999999999999999999 69999999999999988 9
Q ss_pred CCCeEeeCccHHHH---Hhc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC--CcccChhhHhccCcEEEEe
Q 018158 229 GADEFILSTNAMQM---QAG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA--PFELPSFPLIFGKRSVKGS 302 (360)
Q Consensus 229 g~~~~v~~~~~~~~---~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~ 302 (360)
|+++++++.+.+.. ... ..++|++|||+|....+..++++++++|+++.+|.... ...++...++.+++++.++
T Consensus 236 Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~ 315 (371)
T cd08281 236 GATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGS 315 (371)
T ss_pred CCceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEEE
Confidence 99999987765322 222 34799999999987778999999999999999997643 3456667788899999998
Q ss_pred ecCC---HHHHHHHHHHHhcCCCcc--ce-EEECCccHHHHHHHHHcCCCceeEEE
Q 018158 303 MTGG---MRETQEMMNVCGKYNITC--NI-EVIKPDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 303 ~~~~---~~~~~~~~~~l~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~gkvvi 352 (360)
.... .++++.+++++.++++++ .+ ++|+|+++++|++.+.+++..+|+|+
T Consensus 316 ~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 316 YMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred ecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 7653 567899999999999975 34 89999999999999999998877653
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-51 Score=349.61 Aligned_cols=331 Identities=26% Similarity=0.399 Sum_probs=288.2
Q ss_pred cCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEecc
Q 018158 18 HDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97 (360)
Q Consensus 18 ~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 97 (360)
.++.++|.++|+.+++|+.+||+||++++++|++|.+.+.|..+...+|.++|||++|+|+.+|.+|+++++||+|+ ..
T Consensus 14 w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~vk~GD~Vi-pl 92 (375)
T KOG0022|consen 14 WEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTTVKPGDHVI-PL 92 (375)
T ss_pred ccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccccCCCCEEe-ec
Confidence 47888999999999999999999999999999999999999877788999999999999999999999999999995 47
Q ss_pred CccCCCCChhhhCCCCCCcccccccc-ccccc-CCC-------------ccccceeeEEEeecceeEECCCCCCcccccc
Q 018158 98 LAAACMECEFCKDSQENYCDKIQFTY-NGIFW-DGS-------------ITYGGYSEMLVADYRFVVHVPENIAMDAAAP 162 (360)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~c~~~~~~~-~g~~~-~~~-------------~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~ 162 (360)
+.+.|++|-+|+++..|+|..+.... .+.+. .|. ....+|+||.++++..+++|++...++.++.
T Consensus 93 f~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~kvcL 172 (375)
T KOG0022|consen 93 FTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLEKVCL 172 (375)
T ss_pred cccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCCCChhheeE
Confidence 88999999999999999999854432 33332 111 2234899999999999999999999999999
Q ss_pred ccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHH
Q 018158 163 LLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQ 241 (360)
Q Consensus 163 l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~ 241 (360)
|.|...|+|.|......++ ||+++.|+|.|++|+++++-||..|+ ++++++-++++.+.+++ ||+++++|+.+...
T Consensus 173 LgCGvsTG~GAa~~~Akv~--~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~-fGaTe~iNp~d~~~ 249 (375)
T KOG0022|consen 173 LGCGVSTGYGAAWNTAKVE--PGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKE-FGATEFINPKDLKK 249 (375)
T ss_pred eeccccccchhhhhhcccC--CCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHh-cCcceecChhhccc
Confidence 9999999999998888866 99999999999999999999999999 79999999999999999 99999999985422
Q ss_pred -H----Hhc-CCCcCEEEEcCCCcccHHHHHHHhccC-CEEEEeCCCCCCcc--cChhhHhccCcEEEEeecC---CHHH
Q 018158 242 -M----QAG-KRTLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPEAPFE--LPSFPLIFGKRSVKGSMTG---GMRE 309 (360)
Q Consensus 242 -~----~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~--~~~~~~~~~~~~i~~~~~~---~~~~ 309 (360)
+ .+. +.++|+.|||+|....+.+++.+.+.| |+-+.+|....... +.++.+ ..+.++.|+.++ .+.+
T Consensus 250 ~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l-~~GR~~~Gs~FGG~K~~~~ 328 (375)
T KOG0022|consen 250 PIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQL-VTGRTWKGSAFGGFKSKSD 328 (375)
T ss_pred cHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhh-ccccEEEEEecccccchhh
Confidence 2 222 789999999999999999999999998 99999998765444 444444 457888888775 4678
Q ss_pred HHHHHHHHhcCCCcc--ce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 310 TQEMMNVCGKYNITC--NI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 310 ~~~~~~~l~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+..+++...+++++. .| |.+||+++++||+.|.+++.. |.|+.+
T Consensus 329 iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~~ 375 (375)
T KOG0022|consen 329 IPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLWM 375 (375)
T ss_pred hhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEeC
Confidence 999998888888754 45 999999999999999999987 777753
|
|
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-50 Score=374.49 Aligned_cols=329 Identities=22% Similarity=0.340 Sum_probs=280.5
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|+|.++. +++.+++++++.|+|+++||+||+.++++|++|++.+.+.+. ...+|.++|||++|+|+++|++|+.|+
T Consensus 1 mka~~~~---~~~~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 77 (339)
T cd08239 1 MRGAVFP---GDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFR 77 (339)
T ss_pred CeEEEEe---cCCceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCC
Confidence 4555542 457899999999999999999999999999999998877643 234578999999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++.+. ..|+.|..|..|+++.|.+..+ ..| ...+|+|+||+.++.++++++|+++++++++++++++.
T Consensus 78 ~Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~-~~g-----~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ 150 (339)
T cd08239 78 VGDRVMVYHY-VGCGACRNCRRGWMQLCTSKRA-AYG-----WNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIG 150 (339)
T ss_pred CCCEEEECCC-CCCCCChhhhCcCcccCcCccc-ccc-----cCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHH
Confidence 9999987544 5899999999999999987543 122 24579999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHH--HHHhc
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAM--QMQAG 245 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~~ 245 (360)
|||+++.... +.+|++|+|+|+|++|++++|+|+.+|++ |+++++++++++.+++ +|+++++++++.+ .....
T Consensus 151 ta~~~l~~~~---~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~ 226 (339)
T cd08239 151 TAYHALRRVG---VSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKA-LGADFVINSGQDDVQEIREL 226 (339)
T ss_pred HHHHHHHhcC---CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hCCCEEEcCCcchHHHHHHH
Confidence 9999997654 45899999999999999999999999998 9999999999999988 9999999876643 12222
Q ss_pred --CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccC-hhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCC
Q 018158 246 --KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELP-SFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNI 322 (360)
Q Consensus 246 --~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l 322 (360)
++++|++|||+|....+..++++++++|+++.+|..... .+. ...++.+++++.++.....++++++++++.++++
T Consensus 227 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i 305 (339)
T cd08239 227 TSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-TIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKL 305 (339)
T ss_pred hCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-ccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCC
Confidence 458999999999887678899999999999999976532 333 2456779999999988888899999999999998
Q ss_pred cc--ce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 323 TC--NI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 323 ~~--~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
++ .+ ++|+++++++|++.+++++ .||+|+++
T Consensus 306 ~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 306 EVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred ChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 64 45 8999999999999998876 69999875
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-50 Score=373.68 Aligned_cols=324 Identities=23% Similarity=0.309 Sum_probs=271.2
Q ss_pred CCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhc-cCCC--CCCCCCccccccceEEEEecCCCCCCCCCCEEEe
Q 018158 19 DPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVK-NDWG--ITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAV 95 (360)
Q Consensus 19 ~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~-g~~~--~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 95 (360)
.+++++++++.+.| ++++||||||.+++||++|++++. |.++ ...+|.++|||++|+|+++ ++++|++||||++
T Consensus 11 ~~~~~~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~~~vGdrV~~ 87 (343)
T PRK09880 11 AGKKDVAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSGLKEGQTVAI 87 (343)
T ss_pred ecCCceEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCccCCCCCEEEE
Confidence 46688999999987 689999999999999999999875 4332 2357899999999999999 7889999999988
Q ss_pred ccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhh
Q 018158 96 GCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMK 175 (360)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~ 175 (360)
.+. .+|+.|.+|..|.+++|++..+ .|........+|+|+||+.++++.++++|+++++++++ +...+.+||+++.
T Consensus 88 ~~~-~~cg~c~~c~~g~~~~c~~~~~--~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~~~~a~~al~ 163 (343)
T PRK09880 88 NPS-KPCGHCKYCLSHNENQCTTMRF--FGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEPLAVAIHAAH 163 (343)
T ss_pred CCC-CCCcCChhhcCCChhhCCCcce--eecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcHHHHHHHHHH
Confidence 654 5899999999999999998543 22111111246999999999999999999999987655 4456778999998
Q ss_pred ccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHH--hcCCCcCEE
Q 018158 176 DNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQ--AGKRTLDFI 252 (360)
Q Consensus 176 ~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~--~~~~~~d~v 252 (360)
+.. ..+|++|+|.|+|++|++++|+|+.+|+ +|+++++++++++.+++ +|+++++++++.+... ....++|++
T Consensus 164 ~~~---~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~-lGa~~vi~~~~~~~~~~~~~~g~~D~v 239 (343)
T PRK09880 164 QAG---DLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLARE-MGADKLVNPQNDDLDHYKAEKGYFDVS 239 (343)
T ss_pred hcC---CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHH-cCCcEEecCCcccHHHHhccCCCCCEE
Confidence 765 3489999999999999999999999999 69999999999999998 9999999877643211 113369999
Q ss_pred EEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc--ce-EEE
Q 018158 253 LDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC--NI-EVI 329 (360)
Q Consensus 253 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~--~i-~~~ 329 (360)
|||+|....+..++++++++|+++.+|.......++...++.+++++.++... .+++++++++++++++++ .+ ++|
T Consensus 240 id~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~-~~~~~~~~~l~~~g~i~~~~~i~~~~ 318 (343)
T PRK09880 240 FEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRF-TEEFNTAVSWLANGVINPLPLLSAEY 318 (343)
T ss_pred EECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeec-cccHHHHHHHHHcCCCCchhheEEEE
Confidence 99999876789999999999999999986655667777788899999998754 467899999999999975 45 899
Q ss_pred CCccHHHHHHHHHcCCCceeEEEec
Q 018158 330 KPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 330 ~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+++++++|++.+.+++..||+++.+
T Consensus 319 ~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 319 PFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred EHHHHHHHHHHHhcCCCceEEEEeC
Confidence 9999999999999988789999864
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-50 Score=364.74 Aligned_cols=309 Identities=25% Similarity=0.367 Sum_probs=264.2
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccC-CCCCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKND-WGITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~-~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|+++++..++++..++++|+|.|.|++|||||||+++++|+.|++.++|. .+...+|.++|.|++|+|+++|++|++|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 56777878888778999999999999999999999999999999999997 33456899999999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||||+..... ..+|+|+||..+|++.++++|+++++++||++++++.
T Consensus 81 ~GdrV~~~~~~--------------------------------~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~ 128 (326)
T COG0604 81 VGDRVAALGGV--------------------------------GRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGL 128 (326)
T ss_pred CCCEEEEccCC--------------------------------CCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHH
Confidence 99999863100 1469999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---Hh
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM---QA 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~ 244 (360)
|||+++....+++ +|++|||+|+ |++|.+++|+||.+|++++++..++++.+++++ +|+++++++.+.+.. ++
T Consensus 129 TA~~~l~~~~~l~--~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~-lGAd~vi~y~~~~~~~~v~~ 205 (326)
T COG0604 129 TAWLALFDRAGLK--PGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKE-LGADHVINYREEDFVEQVRE 205 (326)
T ss_pred HHHHHHHHhcCCC--CCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHh-cCCCEEEcCCcccHHHHHHH
Confidence 9999999866655 9999999998 999999999999999888878778888887777 999999998886433 22
Q ss_pred c--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC--CcccChhhHhccCcEEEEeecCCH------HHHHHHH
Q 018158 245 G--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA--PFELPSFPLIFGKRSVKGSMTGGM------RETQEMM 314 (360)
Q Consensus 245 ~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~ 314 (360)
. ++++|+|||++|.. .+..+++.++++|+++.+|..++ ...++...++.+.+...+...... +.+++++
T Consensus 206 ~t~g~gvDvv~D~vG~~-~~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~ 284 (326)
T COG0604 206 LTGGKGVDVVLDTVGGD-TFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELF 284 (326)
T ss_pred HcCCCCceEEEECCCHH-HHHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHH
Confidence 2 46899999999987 57889999999999999998773 444566677778888888777644 4567788
Q ss_pred HHHhcCCCccce-EEECCccHHHHHHHHHc-CCCceeEEEec
Q 018158 315 NVCGKYNITCNI-EVIKPDQINEALDRLAR-NDVRYRFVIDI 354 (360)
Q Consensus 315 ~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~-~~~~gkvvi~~ 354 (360)
+++.+|.+++.+ .+||+++..++...... ++..||+|+++
T Consensus 285 ~~~~~g~l~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 285 DLLASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred HHHHcCCCcceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 999999999999 79999996555554433 58889999974
|
|
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-49 Score=367.00 Aligned_cols=336 Identities=22% Similarity=0.349 Sum_probs=279.3
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
||++++..++ +++++++++.|+|+++||+|||.++++|++|++.+.|.. ...+|.++|||++|+|+++|+++++|++
T Consensus 2 mka~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 78 (358)
T TIGR03451 2 VRGVIARSKG--APVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGI-NDEFPFLLGHEAAGVVEAVGEGVTDVAP 78 (358)
T ss_pred cEEEEEccCC--CCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCc-cccCCcccccceEEEEEEeCCCCcccCC
Confidence 7777765443 458999999999999999999999999999999998865 3357889999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCccccccccc------ccccCCCccccceeeEEEeecceeEECCCCCCccccccc
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYN------GIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPL 163 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~------g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l 163 (360)
||+|++.+. ..|+.|.+|..|++++|........ |.........|+|+||+.+++++++++|+++++++++++
T Consensus 79 GdrV~~~~~-~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l 157 (358)
T TIGR03451 79 GDYVVLNWR-AVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLL 157 (358)
T ss_pred CCEEEEccC-CCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhhh
Confidence 999987654 5799999999999999985321110 110000013599999999999999999999999999999
Q ss_pred cchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHHHH
Q 018158 164 LCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAMQM 242 (360)
Q Consensus 164 ~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 242 (360)
++.+.++|+++.....++ +|++|||+|+|++|++++|+|+.+|++ |+++++++++++.+++ +|+++++++.+.+..
T Consensus 158 ~~~~~ta~~~~~~~~~~~--~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~-~Ga~~~i~~~~~~~~ 234 (358)
T TIGR03451 158 GCGVMAGLGAAVNTGGVK--RGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWARE-FGATHTVNSSGTDPV 234 (358)
T ss_pred cccchhhHHHHHhccCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cCCceEEcCCCcCHH
Confidence 999999998876655544 999999999999999999999999995 9999999999999988 999999987664322
Q ss_pred ---Hhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC--cccChhhHhccCcEEEEeecC---CHHHHHH
Q 018158 243 ---QAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP--FELPSFPLIFGKRSVKGSMTG---GMRETQE 312 (360)
Q Consensus 243 ---~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~---~~~~~~~ 312 (360)
... +.++|++|||+|....+..++++++++|+++.+|..... .+++...++.+++++.++... ..+++++
T Consensus 235 ~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 314 (358)
T TIGR03451 235 EAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDFPM 314 (358)
T ss_pred HHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHHHH
Confidence 222 457999999999876789999999999999999986532 456666778889999987643 3577899
Q ss_pred HHHHHhcCCCcc--ce-EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 313 MMNVCGKYNITC--NI-EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 313 ~~~~l~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
+++++.++++++ .+ ++|+++++++|++.+++++.. |+++.
T Consensus 315 ~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 315 LVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred HHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 999999999965 34 899999999999999998876 77764
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-49 Score=366.12 Aligned_cols=337 Identities=23% Similarity=0.351 Sum_probs=272.8
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|++.++ ..+.+.++++++|.|+|+++||+|||.++++|++|++.+.|.++...+|.++|||++|+|+++|+++++|++
T Consensus 2 ~~a~~~--~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~ 79 (368)
T TIGR02818 2 SRAAVA--WAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKV 79 (368)
T ss_pred ceEEEE--ecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCC
Confidence 454444 344567999999999999999999999999999999999887654567899999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCccccccc-ccccccC--------C-----CccccceeeEEEeecceeEECCCCC
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFT-YNGIFWD--------G-----SITYGGYSEMLVADYRFVVHVPENI 155 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~g~~~~--------~-----~~~~g~~~~~~~v~~~~~~~iP~~~ 155 (360)
||||++.+ ..+|+.|.+|..|.++.|.+.... ..|.... | ....|+|+||+.+|+++++++|+++
T Consensus 80 GdrV~~~~-~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l 158 (368)
T TIGR02818 80 GDHVIPLY-TAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAA 158 (368)
T ss_pred CCEEEEcC-CCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCC
Confidence 99998754 458999999999999999874311 1111100 0 0124799999999999999999999
Q ss_pred CccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEe
Q 018158 156 AMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFI 234 (360)
Q Consensus 156 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v 234 (360)
++++++++++++.|||+++.....++ +|++|||+|+|++|++++|+||.+|+ +|+++++++++++.+++ +|+++++
T Consensus 159 ~~~~aa~l~~~~~ta~~a~~~~~~~~--~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~-~Ga~~~i 235 (368)
T TIGR02818 159 PLEEVCLLGCGVTTGIGAVLNTAKVE--EGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKK-LGATDCV 235 (368)
T ss_pred CHHHhhhhcchhHHHHHHHHHhcCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-hCCCeEE
Confidence 99999999999999999986655544 99999999999999999999999999 79999999999999988 9999999
Q ss_pred eCccH-----HHHHhc-CCCcCEEEEcCCCcccHHHHHHHhccC-CEEEEeCCCCC--CcccChhhHhccCcEEEEeecC
Q 018158 235 LSTNA-----MQMQAG-KRTLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPEA--PFELPSFPLIFGKRSVKGSMTG 305 (360)
Q Consensus 235 ~~~~~-----~~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~ 305 (360)
++.+. ....+. ..++|++|||+|....+..++++++++ |+++.+|.... .+.+....+.. +..+.++...
T Consensus 236 ~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~ 314 (368)
T TIGR02818 236 NPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVT-GRVWRGSAFG 314 (368)
T ss_pred cccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhc-cceEEEeecc
Confidence 87641 112222 348999999999877789999999886 99999997642 23333444443 3456666543
Q ss_pred ---CHHHHHHHHHHHhcCCCcc--ce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 306 ---GMRETQEMMNVCGKYNITC--NI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 306 ---~~~~~~~~~~~l~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
...++.++++++.++++++ .+ ++|+|+++++|++.+.+++. .|+++++
T Consensus 315 ~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 315 GVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred CCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence 3467899999999998853 35 89999999999999988765 6999875
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >PLN02827 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-49 Score=365.72 Aligned_cols=336 Identities=20% Similarity=0.327 Sum_probs=276.6
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|++. ..+++...+++++++.|+|+++||+|||.++++|++|++.+.+.. .+|.++|||++|+|+++|+++++|++
T Consensus 13 mka~--~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~~ 87 (378)
T PLN02827 13 CRAA--VAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFEK 87 (378)
T ss_pred eEEE--EEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccCC
Confidence 5544 446666689999999999999999999999999999999887742 35789999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCccccccccccccc--------------CCCccccceeeEEEeecceeEECCCCC
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFW--------------DGSITYGGYSEMLVADYRFVVHVPENI 155 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~--------------~~~~~~g~~~~~~~v~~~~~~~iP~~~ 155 (360)
||+|++.+. .+|+.|.+|..|.+++|.+......|... .+....|+|+||+.++++.++++|+++
T Consensus 88 GdrV~~~~~-~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l 166 (378)
T PLN02827 88 GDHVLTVFT-GECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLA 166 (378)
T ss_pred CCEEEEecC-CCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCC
Confidence 999987654 48999999999999999874221111110 001135899999999999999999999
Q ss_pred CccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEe
Q 018158 156 AMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFI 234 (360)
Q Consensus 156 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v 234 (360)
++++++++++.+.++|+++.....++ +|++|||+|+|++|++++|+|+.+|++ |+++++++++++.+++ +|+++++
T Consensus 167 ~~~~aa~l~~~~~~a~~~~~~~~~~~--~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~-lGa~~~i 243 (378)
T PLN02827 167 PLHKICLLSCGVAAGLGAAWNVADVS--KGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKT-FGVTDFI 243 (378)
T ss_pred CHHHhhhhcchhHhhHHHHHhhcCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH-cCCcEEE
Confidence 99999999999999998776555544 999999999999999999999999995 8888889999999988 9999999
Q ss_pred eCccH--H---HHHhc-CCCcCEEEEcCCCcccHHHHHHHhccC-CEEEEeCCCCCCcccCh-hhHhccCcEEEEeecC-
Q 018158 235 LSTNA--M---QMQAG-KRTLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPEAPFELPS-FPLIFGKRSVKGSMTG- 305 (360)
Q Consensus 235 ~~~~~--~---~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~- 305 (360)
++++. + ..... +.++|++||++|....+..+++.++++ |+++.+|.......+.. ..++.+++++.|+...
T Consensus 244 ~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 323 (378)
T PLN02827 244 NPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGG 323 (378)
T ss_pred cccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecCC
Confidence 87652 1 12222 348999999999876789999999998 99999998754444333 3467789999998764
Q ss_pred --CHHHHHHHHHHHhcCCCcc--ce-EEECCccHHHHHHHHHcCCCceeEEEecC
Q 018158 306 --GMRETQEMMNVCGKYNITC--NI-EVIKPDQINEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 306 --~~~~~~~~~~~l~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
...+++.+++++.++++++ .+ ++|+|+++++|++.+.+++. +|+||++.
T Consensus 324 ~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~ 377 (378)
T PLN02827 324 WKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP 377 (378)
T ss_pred CchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence 3457889999999999987 56 89999999999999999887 69999764
|
|
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-49 Score=367.58 Aligned_cols=337 Identities=23% Similarity=0.390 Sum_probs=275.7
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|++.++ .++.+.+.+++++.|+|+++||+|||+++++|++|++.+.|.+. ...+|.++|||++|+|+++|++++.|+
T Consensus 11 mka~~~--~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~ 88 (381)
T PLN02740 11 CKAAVA--WGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEDLK 88 (381)
T ss_pred eEEEEE--ecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCCcCC
Confidence 555444 45545689999999999999999999999999999999988753 235689999999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCccccccc-cc------cccc----------CCCccccceeeEEEeecceeEEC
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFT-YN------GIFW----------DGSITYGGYSEMLVADYRFVVHV 151 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~------g~~~----------~~~~~~g~~~~~~~v~~~~~~~i 151 (360)
+||||++.+ ..+|+.|.+|..|.++.|.+.... +. |... .....+|+|+||+.++.++++++
T Consensus 89 vGdrV~~~~-~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~i 167 (381)
T PLN02740 89 AGDHVIPIF-NGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKI 167 (381)
T ss_pred CCCEEEecC-CCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEEC
Confidence 999998765 458999999999999999985321 10 1000 00113699999999999999999
Q ss_pred CCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCC
Q 018158 152 PENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGA 230 (360)
Q Consensus 152 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~ 230 (360)
|+++++++++.+++.+.|||+++.....++ +|++|+|+|+|++|++++|+|+.+|+ +|+++++++++++.+++ +|+
T Consensus 168 P~~~~~~~aa~l~~~~~ta~~~~~~~~~~~--~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~-~Ga 244 (381)
T PLN02740 168 DPNAPLKKMSLLSCGVSTGVGAAWNTANVQ--AGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKE-MGI 244 (381)
T ss_pred CCCCCHHHhhhhcccchhhHHHHHhccCCC--CCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHH-cCC
Confidence 999999999999999999999876655544 99999999999999999999999999 69999999999999988 999
Q ss_pred CeEeeCccH-----HHHHhc-CCCcCEEEEcCCCcccHHHHHHHhccC-CEEEEeCCCCCC--cccChhhHhccCcEEEE
Q 018158 231 DEFILSTNA-----MQMQAG-KRTLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPEAP--FELPSFPLIFGKRSVKG 301 (360)
Q Consensus 231 ~~~v~~~~~-----~~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~ 301 (360)
++++++++. +..... ..++|++||++|....+..++.+++++ |+++.+|..... +.+....+ .+++++.|
T Consensus 245 ~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~-~~~~~i~g 323 (381)
T PLN02740 245 TDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMEL-FDGRSITG 323 (381)
T ss_pred cEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHH-hcCCeEEE
Confidence 999987652 122222 338999999999877889999999996 999999987543 23333333 36889998
Q ss_pred eecCC---HHHHHHHHHHHhcCCCcc--ce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 302 SMTGG---MRETQEMMNVCGKYNITC--NI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 302 ~~~~~---~~~~~~~~~~l~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+..+. ..+++++++++.++.+++ .+ ++|+|+|+++|++.+.+++. .|++|++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~~ 381 (381)
T PLN02740 324 SVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLHL 381 (381)
T ss_pred EecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEeC
Confidence 87644 357889999999998864 45 89999999999999998876 4999864
|
|
| >COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-49 Score=361.33 Aligned_cols=329 Identities=25% Similarity=0.384 Sum_probs=266.8
Q ss_pred CCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCC-ccccccceEEEEecCCCCCCCCCCEEEecc
Q 018158 19 DPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPV-VPGHEITGIITKVGSNVKNFKVGDRAAVGC 97 (360)
Q Consensus 19 ~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~-~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 97 (360)
.+....++++.+.|.+.|+||+|||.+++||+||++++++..+....+. ++|||++|+|+++| .++.+++||||++.
T Consensus 8 ~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~GdrVvv~- 85 (350)
T COG1063 8 VGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVGDRVVVE- 85 (350)
T ss_pred ecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCCCEEEEC-
Confidence 4434444777777778999999999999999999999999876556565 99999999999999 77889999999876
Q ss_pred CccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEE-CCCCCCccccccccchhhhhhchhhc
Q 018158 98 LAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVH-VPENIAMDAAAPLLCAGITVFCPMKD 176 (360)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~-iP~~~~~~~aa~l~~~~~ta~~~l~~ 176 (360)
...+|+.|.+|+.|.++.|.+..+. |....+...+|+|+||+.+|.++.++ +|+++ ..+++++.-.+.++|++...
T Consensus 86 ~~~~Cg~C~~C~~G~~~~C~~~~~~--g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~~~~~a~ 162 (350)
T COG1063 86 PNIPCGHCRYCRAGEYNLCENPGFY--GYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATAYHGHAE 162 (350)
T ss_pred CCcCCCCChhHhCcCcccCCCcccc--ccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhhhhhhhh
Confidence 4568999999999999999965422 22212222689999999999766555 48888 66777788888999777433
Q ss_pred cCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccH---HHHHhc--CCCcC
Q 018158 177 NNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNA---MQMQAG--KRTLD 250 (360)
Q Consensus 177 ~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~---~~~~~~--~~~~d 250 (360)
..... ++++|+|+|+|++|++++++++.+|+ +|++++++++|++.+++.+|++.+++.... ....+. +.++|
T Consensus 163 ~~~~~--~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D 240 (350)
T COG1063 163 RAAVR--PGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGRGAD 240 (350)
T ss_pred ccCCC--CCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHHHHhCCCCCC
Confidence 33322 56699999999999999999999998 699999999999999995667766665442 112222 56799
Q ss_pred EEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCc-ccChhhHhccCcEEEEeec-CCHHHHHHHHHHHhcCCCccc--e
Q 018158 251 FILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPF-ELPSFPLIFGKRSVKGSMT-GGMRETQEMMNVCGKYNITCN--I 326 (360)
Q Consensus 251 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~l~~~~l~~~--i 326 (360)
++|||+|...++.+++++++++|+++.+|...... .++...+..+++++.|+.. ....+++.+++++.+|++.+. +
T Consensus 241 ~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~g~i~~~~li 320 (350)
T COG1063 241 VVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASGKIDPEKLI 320 (350)
T ss_pred EEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHcCCCChhHce
Confidence 99999998888899999999999999999987655 6778889999999999965 556789999999999999764 4
Q ss_pred -EEECCccHHHHHHHHHcCCC-ceeEEEec
Q 018158 327 -EVIKPDQINEALDRLARNDV-RYRFVIDI 354 (360)
Q Consensus 327 -~~~~~~~~~~a~~~~~~~~~-~gkvvi~~ 354 (360)
++++++++++|++.+.+++. ..|+++++
T Consensus 321 t~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 321 THRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred EeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 89999999999999998654 45888864
|
|
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-48 Score=358.70 Aligned_cols=323 Identities=24% Similarity=0.345 Sum_probs=274.9
Q ss_pred CCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCC-CCCCCCCccccccceEEEEecCCCCCCCCCCEEEecc
Q 018158 19 DPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDW-GITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97 (360)
Q Consensus 19 ~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 97 (360)
++.+.++++++|.|+++++||+|||.++++|++|++.+.+.. ....+|.++|||++|+|+++|++++.+ +||+|++.+
T Consensus 6 ~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~ 84 (349)
T TIGR03201 6 EPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAVIVPA 84 (349)
T ss_pred cCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEEEECC
Confidence 333358999999999999999999999999999999875433 234568899999999999999999887 999998765
Q ss_pred CccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCC------CCCccccccccchhhhhh
Q 018158 98 LAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPE------NIAMDAAAPLLCAGITVF 171 (360)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~------~~~~~~aa~l~~~~~ta~ 171 (360)
. .+|+.|.+|..|.+++|....+ .| ...+|+|+||+.++.+.++++|+ ++++++++.+++.+.++|
T Consensus 85 ~-~~cg~c~~c~~g~~~~c~~~~~--~g-----~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~ 156 (349)
T TIGR03201 85 V-IPCGECELCKTGRGTICRAQKM--PG-----NDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPY 156 (349)
T ss_pred C-CCCCCChhhhCcCcccCCCCCc--cC-----cCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHH
Confidence 5 4899999999999999976422 22 23469999999999999999999 899999999999999999
Q ss_pred chhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH--H----HHhc
Q 018158 172 CPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM--Q----MQAG 245 (360)
Q Consensus 172 ~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~----~~~~ 245 (360)
+++.... +++|++|+|+|+|++|++++|+|+.+|++|+++++++++++.+++ +|+++++++.+.+ . ....
T Consensus 157 ~a~~~~~---~~~g~~VlV~G~G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~-~Ga~~~i~~~~~~~~~~~~~~~~~ 232 (349)
T TIGR03201 157 QAAVQAG---LKKGDLVIVIGAGGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKG-FGADLTLNPKDKSAREVKKLIKAF 232 (349)
T ss_pred HHHHhcC---CCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-hCCceEecCccccHHHHHHHHHhh
Confidence 9997643 459999999999999999999999999999999999999999988 9999998875531 1 1212
Q ss_pred --CCCcC----EEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhc
Q 018158 246 --KRTLD----FILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGK 319 (360)
Q Consensus 246 --~~~~d----~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~ 319 (360)
++++| ++|||+|....+..++++++++|+++.+|.......++...++.++.++.++.....++++.+++++++
T Consensus 233 t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~ 312 (349)
T TIGR03201 233 AKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLD 312 (349)
T ss_pred cccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHc
Confidence 45676 899999988778889999999999999998765556666677778889999887777889999999999
Q ss_pred CCCcc--ceEEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 320 YNITC--NIEVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 320 ~~l~~--~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+++++ .++.|+|+++++||+.+++++..||+++++
T Consensus 313 g~i~~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 313 GKIQLGPFVERRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred CCCCcccceEEecHHHHHHHHHHHHcCCccceEEecC
Confidence 99865 457899999999999999999889999863
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-48 Score=359.71 Aligned_cols=331 Identities=21% Similarity=0.319 Sum_probs=262.2
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC---CCCCCccccccceEEEEecCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI---TMYPVVPGHEITGIITKVGSNVKN 86 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~ 86 (360)
|+++++. .+..+++++++|.|+|+++||||||++++||++|++.++|.++. ..+|.++|||++|+|+++|++ +.
T Consensus 1 mka~~~~--~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~ 77 (355)
T cd08230 1 MKAIAVK--PGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SG 77 (355)
T ss_pred CceeEec--CCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CC
Confidence 3555554 23234999999999999999999999999999999999987532 235789999999999999999 99
Q ss_pred CCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccch
Q 018158 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCA 166 (360)
Q Consensus 87 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~ 166 (360)
|++||||++.+ ...|+.|.+|..|++++|.+..+...|.. ..+|+|+||+.++++.++++|++++ + ++++..+
T Consensus 78 ~~vGdrV~~~~-~~~cg~C~~c~~g~~~~c~~~~~~~~g~~----~~~G~~aey~~~~~~~~~~~P~~~~-~-~a~~~~p 150 (355)
T cd08230 78 LSPGDLVVPTV-RRPPGKCLNCRIGRPDFCETGEYTERGIK----GLHGFMREYFVDDPEYLVKVPPSLA-D-VGVLLEP 150 (355)
T ss_pred CCCCCEEEecc-ccCCCcChhhhCcCcccCCCcceeccCcC----CCCccceeEEEeccccEEECCCCCC-c-ceeecch
Confidence 99999998654 45799999999999999987544333321 2469999999999999999999999 4 3444445
Q ss_pred hhhhhchhhccC----CCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeC---ChhHHHHHHHHcCCCeEeeCccH
Q 018158 167 GITVFCPMKDNN----LIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVIST---SPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 167 ~~ta~~~l~~~~----~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~---~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
+.++++++.... .....+|++|+|+|+|++|++++|+||.+|++|+++++ ++++++.+++ +|++. +++.+.
T Consensus 151 ~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~-~Ga~~-v~~~~~ 228 (355)
T cd08230 151 LSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEE-LGATY-VNSSKT 228 (355)
T ss_pred HHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cCCEE-ecCCcc
Confidence 555444443221 11133899999999999999999999999999999997 6788888887 99986 455443
Q ss_pred HHH-HhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC--CcccC----hhhHhccCcEEEEeecCCHHHHHH
Q 018158 240 MQM-QAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA--PFELP----SFPLIFGKRSVKGSMTGGMRETQE 312 (360)
Q Consensus 240 ~~~-~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~ 312 (360)
+.. .....++|++|||+|....+..+++.++++|+++.+|...+ ..+++ ...++.+++++.|+....+++++.
T Consensus 229 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~ 308 (355)
T cd08230 229 PVAEVKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANKRHFEQ 308 (355)
T ss_pred chhhhhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCchhhHHH
Confidence 211 11246799999999987678999999999999999998764 33444 346778999999998877788999
Q ss_pred HHHHHhcCC------Cccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 313 MMNVCGKYN------ITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 313 ~~~~l~~~~------l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+++++.++. +++.+ ++|+++++++|++.+.++. +|+|+++
T Consensus 309 ~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 309 AVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred HHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 999998876 44555 8999999999999887654 5999875
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-47 Score=358.44 Aligned_cols=335 Identities=21% Similarity=0.369 Sum_probs=275.7
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|||.++ ...++.+++++++.|+|+++||+||+.++++|++|++.++|..+...+|.++|||++|+|+++|+++++|++
T Consensus 3 ~ka~~~--~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (369)
T cd08301 3 CKAAVA--WEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKP 80 (369)
T ss_pred cEEEEE--ecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCcccc
Confidence 565555 344467999999999999999999999999999999999987655567899999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCccccccc-cccccc--------------CCCccccceeeEEEeecceeEECCCC
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFT-YNGIFW--------------DGSITYGGYSEMLVADYRFVVHVPEN 154 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~g~~~--------------~~~~~~g~~~~~~~v~~~~~~~iP~~ 154 (360)
||||++. ...+|+.|.+|..|.++.|.+.... ..|... +.....|+|+||+.+++++++++|++
T Consensus 81 GdrV~~~-~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~ 159 (369)
T cd08301 81 GDHVLPV-FTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPE 159 (369)
T ss_pred CCEEEEc-cCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCC
Confidence 9999875 4568999999999999999984321 112111 00113589999999999999999999
Q ss_pred CCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeE
Q 018158 155 IAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEF 233 (360)
Q Consensus 155 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~ 233 (360)
+++++++++++.+.|||+++.....++ +|++|+|+|+|++|++++|+|+.+|+ +|+++++++++++.+++ +|++.+
T Consensus 160 ~~~~~aa~~~~~~~ta~~~~~~~~~~~--~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~-~Ga~~~ 236 (369)
T cd08301 160 APLDKVCLLSCGVSTGLGAAWNVAKVK--KGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKK-FGVTEF 236 (369)
T ss_pred CCHHHhhhhcchhhHHHHHHHhhcCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cCCceE
Confidence 999999999999999999877655554 99999999999999999999999999 79999999999999988 999999
Q ss_pred eeCccH-----HHHHhc-CCCcCEEEEcCCCcccHHHHHHHhccC-CEEEEeCCCCC--CcccChhhHhccCcEEEEeec
Q 018158 234 ILSTNA-----MQMQAG-KRTLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPEA--PFELPSFPLIFGKRSVKGSMT 304 (360)
Q Consensus 234 v~~~~~-----~~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~ 304 (360)
+++.+. ...... +.++|++||++|....+..++.+++++ |+++.+|.... .+++....++ +++++.++..
T Consensus 237 i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~ 315 (369)
T cd08301 237 VNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLL-NGRTLKGTLF 315 (369)
T ss_pred EcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHh-cCCeEEEEec
Confidence 887642 112222 447999999999876788999999996 99999998753 2334433443 6899998865
Q ss_pred CC---HHHHHHHHHHHhcCCCcc--ce-EEECCccHHHHHHHHHcCCCceeEEE
Q 018158 305 GG---MRETQEMMNVCGKYNITC--NI-EVIKPDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 305 ~~---~~~~~~~~~~l~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~gkvvi 352 (360)
.. +.+++.+++++.++.++. .+ ++|+|+++++|++.+.+++.. |+++
T Consensus 316 ~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~ 368 (369)
T cd08301 316 GGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL 368 (369)
T ss_pred CCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence 42 357889999999998864 34 899999999999999998864 8876
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
| >KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-48 Score=323.86 Aligned_cols=318 Identities=20% Similarity=0.278 Sum_probs=278.1
Q ss_pred CCCCCCcccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEec
Q 018158 2 AQTTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVG 81 (360)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG 81 (360)
..++|.. .+.++..-+++...+++++.|.|+|.|+|++||..++|+|..|..+.+|-+.+...|+++|.|.+|+|+++|
T Consensus 2 ~~~~p~~-~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG 80 (336)
T KOG1197|consen 2 AAASPPL-LKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVG 80 (336)
T ss_pred CCCCCch-heEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEec
Confidence 3456655 888888889999999999999999999999999999999999999999999778899999999999999999
Q ss_pred CCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccc
Q 018158 82 SNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAA 161 (360)
Q Consensus 82 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa 161 (360)
++|+++++||||+.. ...|.|+|+..+|...++++|+.+++.+||
T Consensus 81 ~gvtdrkvGDrVayl-----------------------------------~~~g~yaee~~vP~~kv~~vpe~i~~k~aa 125 (336)
T KOG1197|consen 81 EGVTDRKVGDRVAYL-----------------------------------NPFGAYAEEVTVPSVKVFKVPEAITLKEAA 125 (336)
T ss_pred CCccccccccEEEEe-----------------------------------ccchhhheeccccceeeccCCcccCHHHHH
Confidence 999999999999863 356999999999999999999999999999
Q ss_pred cccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH
Q 018158 162 PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240 (360)
Q Consensus 162 ~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 240 (360)
++...++|||..+++..+++ +|++||++.+ |++|++++|+++..|++++++..+.++++.+++ .|+++.|+++..+
T Consensus 126 a~llq~lTAy~ll~e~y~vk--pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ake-nG~~h~I~y~~eD 202 (336)
T KOG1197|consen 126 ALLLQGLTAYMLLFEAYNVK--PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKE-NGAEHPIDYSTED 202 (336)
T ss_pred HHHHHHHHHHHHHHHhcCCC--CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHh-cCCcceeeccchh
Confidence 99999999999999988866 9999999988 999999999999999999999999999999999 9999999999886
Q ss_pred HHHhc-----CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCc-ccChhhHhccCcEEE-----EeecCCHH-
Q 018158 241 QMQAG-----KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPF-ELPSFPLIFGKRSVK-----GSMTGGMR- 308 (360)
Q Consensus 241 ~~~~~-----~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~-----~~~~~~~~- 308 (360)
..++. ++|+|+++|.+|.. .+...+++|++.|.+|++|..++.. +++...+.-+.+++. |...+..+
T Consensus 203 ~v~~V~kiTngKGVd~vyDsvG~d-t~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el 281 (336)
T KOG1197|consen 203 YVDEVKKITNGKGVDAVYDSVGKD-TFAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVEL 281 (336)
T ss_pred HHHHHHhccCCCCceeeeccccch-hhHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHH
Confidence 66554 89999999999987 6899999999999999999877533 344444444444433 22222211
Q ss_pred --HHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEecCCCcC
Q 018158 309 --ETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDIAGGAR 359 (360)
Q Consensus 309 --~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~~~ 359 (360)
-..+++.++-++.++..| |+|||++..+|+.++++++..||+++.+..+.+
T Consensus 282 ~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~~diesrktvGkvlLlp~~~~~ 335 (336)
T KOG1197|consen 282 VSYVARLFALVNSGHLKIHIDHVYPLSKVADAHADIESRKTVGKVLLLPGPEKE 335 (336)
T ss_pred HHHHHHHHHHhhcCccceeeeeecchHHHHHHHHHHHhhhccceEEEeCCcccc
Confidence 235677788899999999 999999999999999999999999999877653
|
|
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-47 Score=357.55 Aligned_cols=336 Identities=25% Similarity=0.380 Sum_probs=272.2
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|++.++ ..++++++++++|.|+|+++||+||++++++|++|++.+.|.++...+|.++|||++|+|+++|+++++|++
T Consensus 3 ~~a~~~--~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~v 80 (368)
T cd08300 3 CKAAVA--WEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKP 80 (368)
T ss_pred ceEEEE--ecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCC
Confidence 444444 344567999999999999999999999999999999999887755567899999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCccccccc-ccccccCC-------------CccccceeeEEEeecceeEECCCCC
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFT-YNGIFWDG-------------SITYGGYSEMLVADYRFVVHVPENI 155 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~g~~~~~-------------~~~~g~~~~~~~v~~~~~~~iP~~~ 155 (360)
||+|++. ...+|+.|.+|..++++.|.+.... ..|....+ ....|+|+||+.++++.++++|+++
T Consensus 81 GdrV~~~-~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l 159 (368)
T cd08300 81 GDHVIPL-YTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEA 159 (368)
T ss_pred CCEEEEc-CCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCC
Confidence 9999875 5568999999999999999874321 11111000 1124799999999999999999999
Q ss_pred CccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEe
Q 018158 156 AMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFI 234 (360)
Q Consensus 156 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v 234 (360)
++++++++++.+.|||+++.....++ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+++ +|+++++
T Consensus 160 ~~~~aa~l~~~~~ta~~a~~~~~~~~--~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~-lGa~~~i 236 (368)
T cd08300 160 PLDKVCLLGCGVTTGYGAVLNTAKVE--PGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKK-FGATDCV 236 (368)
T ss_pred ChhhhhhhccchhhhHHHHHHhcCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-cCCCEEE
Confidence 99999999999999999886555544 99999999999999999999999999 69999999999999988 9999999
Q ss_pred eCccHH-----HHHhc-CCCcCEEEEcCCCcccHHHHHHHhccC-CEEEEeCCCCC--CcccChhhHhccCcEEEEeecC
Q 018158 235 LSTNAM-----QMQAG-KRTLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPEA--PFELPSFPLIFGKRSVKGSMTG 305 (360)
Q Consensus 235 ~~~~~~-----~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~ 305 (360)
++.+.+ ...+. ..++|++||++|....+..++++++++ |+++.+|.... .+......+. .+..+.++...
T Consensus 237 ~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~ 315 (368)
T cd08300 237 NPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTAFG 315 (368)
T ss_pred cccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEEec
Confidence 876531 12222 348999999999876789999999886 99999997642 2333333333 33466665432
Q ss_pred ---CHHHHHHHHHHHhcCCCcc--ce-EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 306 ---GMRETQEMMNVCGKYNITC--NI-EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 306 ---~~~~~~~~~~~l~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
..++++++++++.++++++ .+ ++|+|+++++|++.+.+++. .|++++
T Consensus 316 ~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 316 GWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred ccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 3577899999999999975 35 89999999999999988875 598875
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-47 Score=355.46 Aligned_cols=333 Identities=25% Similarity=0.424 Sum_probs=274.6
Q ss_pred EEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEE
Q 018158 14 GWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRA 93 (360)
Q Consensus 14 ~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 93 (360)
.+..++..+.++++++|.|+++++||+||++++++|++|++.+.|..+ ..+|.++|||++|+|+++|+++++|++||+|
T Consensus 5 a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV 83 (365)
T cd08277 5 AAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKPGDKV 83 (365)
T ss_pred EEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCCCCEE
Confidence 343444556799999999999999999999999999999999988763 4568899999999999999999999999999
Q ss_pred EeccCccCCCCChhhhCCCCCCcccccccccccccCC-------------CccccceeeEEEeecceeEECCCCCCcccc
Q 018158 94 AVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDG-------------SITYGGYSEMLVADYRFVVHVPENIAMDAA 160 (360)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~-------------~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a 160 (360)
++. ...+|+.|.+|..|.+++|.+..+...|....+ ....|+|+||+.++.++++++|++++++++
T Consensus 84 ~~~-~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~~a 162 (365)
T cd08277 84 IPL-FIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHV 162 (365)
T ss_pred EEC-CCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCCHHHh
Confidence 764 456999999999999999998654433332211 113589999999999999999999999999
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
+++++++.|||+++.....++ +|++|+|+|+|++|++++|+|+.+|+ +|+++++++++++.+++ +|++++++..+.
T Consensus 163 a~l~~~~~ta~~~~~~~~~~~--~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~~i~~~~~ 239 (365)
T cd08277 163 CLLGCGFSTGYGAAWNTAKVE--PGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKE-FGATDFINPKDS 239 (365)
T ss_pred hHhcchhHHHHHHHHhhcCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-cCCCcEeccccc
Confidence 999999999999876555544 99999999999999999999999999 79999999999999988 999999887642
Q ss_pred -----HHHHh-cCCCcCEEEEcCCCcccHHHHHHHhccC-CEEEEeCCCCC-CcccChhhHhccCcEEEEeecCC---HH
Q 018158 240 -----MQMQA-GKRTLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTGG---MR 308 (360)
Q Consensus 240 -----~~~~~-~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~---~~ 308 (360)
+.... .++++|++||++|....+..++++++++ |+++.+|...+ ..+++...+.. ++++.++..+. ..
T Consensus 240 ~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~ 318 (365)
T cd08277 240 DKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGSFFGGFKSRS 318 (365)
T ss_pred cchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEeeecCCCChHH
Confidence 11222 2468999999999876788999999885 99999998653 34445545543 78888876653 45
Q ss_pred HHHHHHHHHhcCCCc--cce-EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 309 ETQEMMNVCGKYNIT--CNI-EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 309 ~~~~~~~~l~~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
+++.+++++.++.++ +.+ ++|+++++++|++.+.+++. .|+++.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~i~ 365 (365)
T cd08277 319 DVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGEC-IRTVIT 365 (365)
T ss_pred HHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCC-ceEeeC
Confidence 788999999998765 445 89999999999999998874 588873
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i |
| >TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-47 Score=359.07 Aligned_cols=334 Identities=21% Similarity=0.248 Sum_probs=260.0
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCC-------CCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENG-------VNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGS 82 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~-------~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~ 82 (360)
|++.++ .++++++++++|.|+|+ +|||||||++++||++|++++.|.+ ...+|.++|||++|+|+++|+
T Consensus 3 mka~v~---~~~~~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~-~~~~p~i~GhE~~G~V~~vG~ 78 (393)
T TIGR02819 3 NRGVVY---LGPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRT-TAPTGLVLGHEITGEVIEKGR 78 (393)
T ss_pred ceEEEE---ecCCceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCC-CCCCCccccceeEEEEEEEcC
Confidence 565555 34567999999999874 6899999999999999999998865 345689999999999999999
Q ss_pred CCCCCCCCCEEEeccCccCCCCChhhhCCCCCCccccccc----ccccccCCCccccceeeEEEeecc--eeEECCCCCC
Q 018158 83 NVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFT----YNGIFWDGSITYGGYSEMLVADYR--FVVHVPENIA 156 (360)
Q Consensus 83 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~----~~g~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~ 156 (360)
+|++|++||||++.+. ..|+.|.+|+.|+++.|.+..+. +.|.... ...+|+|+||+.+|+. +++++|++++
T Consensus 79 ~V~~~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~-~~~~G~~aey~~v~~~~~~l~~vP~~~~ 156 (393)
T TIGR02819 79 DVEFIKIGDIVSVPFN-IACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDM-GGWVGGQSEYVMVPYADFNLLKFPDRDQ 156 (393)
T ss_pred ccccccCCCEEEEecc-cCCCCChHHHCcCcccCcCCCCCCccceeccccc-CCCCCceEEEEEechhhCceEECCCccc
Confidence 9999999999987654 57999999999999999974321 1121100 0236999999999964 7999999875
Q ss_pred c----cccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCC
Q 018158 157 M----DAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGAD 231 (360)
Q Consensus 157 ~----~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~ 231 (360)
. .+++++.+.+.++|+++... . +++|++|+|.|+|++|++++|+|+.+|++ |++++++++|++.+++ +|++
T Consensus 157 ~~~~~~~~a~l~~~~~ta~~a~~~~-~--~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~-~Ga~ 232 (393)
T TIGR02819 157 ALEKIRDLTMLSDIFPTGYHGAVTA-G--VGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARS-FGCE 232 (393)
T ss_pred ccccccceeeeccHHHHHHHHHHhc-C--CCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHH-cCCe
Confidence 3 35678888899999998753 3 45999999988899999999999999997 4556678889999998 9997
Q ss_pred eEeeCc-cH---HHHHhc--CCCcCEEEEcCCCc--------------ccHHHHHHHhccCCEEEEeCCCC-CCc-----
Q 018158 232 EFILST-NA---MQMQAG--KRTLDFILDTVSAK--------------HSLGPILELLKVNGTLSVVGAPE-APF----- 285 (360)
Q Consensus 232 ~~v~~~-~~---~~~~~~--~~~~d~vid~~g~~--------------~~~~~~~~~l~~~G~~v~~g~~~-~~~----- 285 (360)
. +++. +. +..... ++++|++||++|.. ..+.+++++++++|+++.+|... +..
T Consensus 233 ~-v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~ 311 (393)
T TIGR02819 233 T-VDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDA 311 (393)
T ss_pred E-EecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcccccccc
Confidence 4 4432 21 222222 46799999999986 36899999999999999999863 111
Q ss_pred -------ccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc---ce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 286 -------ELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC---NI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 286 -------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~---~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
++....++.+++++.++.....+.+.++++++.++++++ .+ ++|+|+++++||+.+.+++. +|+++++
T Consensus 312 ~~~~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~-~Kvvi~~ 390 (393)
T TIGR02819 312 AAKTGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAA-KKFVIDP 390 (393)
T ss_pred cccccccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCc-eEEEEeC
Confidence 122334455667777644333333478999999999864 24 68999999999999998764 8999987
Q ss_pred C
Q 018158 355 A 355 (360)
Q Consensus 355 ~ 355 (360)
.
T Consensus 391 ~ 391 (393)
T TIGR02819 391 H 391 (393)
T ss_pred C
Confidence 4
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent. |
| >PRK10309 galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-46 Score=349.27 Aligned_cols=328 Identities=24% Similarity=0.322 Sum_probs=267.7
Q ss_pred cceeEEeccCCCCCceEEEEeCCCC-CCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRREN-GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
||++++. +++.+++++.|.|+| +++||+|||.++++|++|++.+.+.. ....|.++|||++|+|+++|+++++|+
T Consensus 1 Mka~~~~---~~~~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~ 76 (347)
T PRK10309 1 MKSVVND---TDGIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEFSGYVEAVGSGVDDLH 76 (347)
T ss_pred CceEEEe---CCCceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-CCCCCcccccceEEEEEEeCCCCCCCC
Confidence 4555553 245799999999987 69999999999999999997543211 123578999999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++.+.. .|+.|.+|..|.++.|.+..+ .| ....|+|+||+.++++.++++|+++++++++.+. ...
T Consensus 77 vGd~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~--~g-----~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~ 147 (347)
T PRK10309 77 PGDAVACVPLL-PCFTCPECLRGFYSLCAKYDF--IG-----SRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PIT 147 (347)
T ss_pred CCCEEEECCCc-CCCCCcchhCcCcccCCCcce--ec-----cCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHH
Confidence 99999887555 799999999999999986432 22 2457999999999999999999999999988763 345
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHH--HHHhc
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAM--QMQAG 245 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~~ 245 (360)
++|+++... . +++|++|+|+|+|++|++++|+|+.+|++ |+++++++++++.+++ +|+++++++++.. .....
T Consensus 148 ~~~~~~~~~-~--~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~Ga~~~i~~~~~~~~~~~~~ 223 (347)
T PRK10309 148 VGLHAFHLA-Q--GCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKS-LGAMQTFNSREMSAPQIQSV 223 (347)
T ss_pred HHHHHHHhc-C--CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH-cCCceEecCcccCHHHHHHH
Confidence 577776443 3 45999999999999999999999999997 7899999999999887 9999998876532 22222
Q ss_pred --CCCcC-EEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccCh---hhHhccCcEEEEeecCC-----HHHHHHHH
Q 018158 246 --KRTLD-FILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPS---FPLIFGKRSVKGSMTGG-----MRETQEMM 314 (360)
Q Consensus 246 --~~~~d-~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~i~~~~~~~-----~~~~~~~~ 314 (360)
+.++| ++|||+|....+..++++++++|+++.+|......+++. ..++.+++++.++.... .+++++++
T Consensus 224 ~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 303 (347)
T PRK10309 224 LRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETAS 303 (347)
T ss_pred hcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHH
Confidence 45788 999999987788999999999999999998765433332 35677899999986542 46788999
Q ss_pred HHHhcCCCc--cce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 315 NVCGKYNIT--CNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 315 ~~l~~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+++.++.++ +.+ ++|+|+++++|++.+.+++..||+|+++
T Consensus 304 ~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 304 RLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred HHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 999999985 445 8999999999999999998889999976
|
|
| >cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-46 Score=343.76 Aligned_cols=330 Identities=29% Similarity=0.537 Sum_probs=287.1
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|++.++ ..+++.+++++++.|+++++||+||+.++++|++|++.+.|..+...+|.++|||++|+|+++|++++.|++
T Consensus 1 m~a~~~--~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~ 78 (333)
T cd08296 1 YKAVQV--TEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKV 78 (333)
T ss_pred CeEEEE--ccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCC
Confidence 344444 444468999999999999999999999999999999999886644456889999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
||+|++.+..+.|++|.+|..|+++.|....+. +....|++++|+.++.+.++++|+++++++++.+++.+.+
T Consensus 79 Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~-------~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~t 151 (333)
T cd08296 79 GDRVGVGWHGGHCGTCDACRRGDFVHCENGKVT-------GVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVT 151 (333)
T ss_pred CCEEEeccccCCCCCChhhhCcCcccCCCCCcc-------CcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHH
Confidence 999998888889999999999999999875431 1233689999999999999999999999999999999999
Q ss_pred hhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---HhcC
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM---QAGK 246 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~~ 246 (360)
||+++... . +.++++++|+|+|++|++++|+|+.+|++|+++++++++++.+++ +|+++++++.+.+.. ...
T Consensus 152 a~~~~~~~-~--~~~~~~vlV~g~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~- 226 (333)
T cd08296 152 TFNALRNS-G--AKPGDLVAVQGIGGLGHLAVQYAAKMGFRTVAISRGSDKADLARK-LGAHHYIDTSKEDVAEALQEL- 226 (333)
T ss_pred HHHHHHhc-C--CCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH-cCCcEEecCCCccHHHHHHhc-
Confidence 99998766 4 449999999999999999999999999999999999999999987 999999887664322 222
Q ss_pred CCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccce
Q 018158 247 RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNI 326 (360)
Q Consensus 247 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i 326 (360)
+++|+++|+.|....+..++++++++|+++.+|......+++...++.+++++.++......++..+++++.++++++.+
T Consensus 227 ~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~v 306 (333)
T cd08296 227 GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVRPMV 306 (333)
T ss_pred CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCCCceE
Confidence 57999999987666789999999999999999987656666666777899999999887778899999999999988777
Q ss_pred EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 327 EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 327 ~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
+.|+++++.+|++.+.+++..||+|++
T Consensus 307 ~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 307 ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 889999999999999999999999874
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal |
| >cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-47 Score=349.90 Aligned_cols=314 Identities=16% Similarity=0.188 Sum_probs=249.8
Q ss_pred CCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC----CCCCCccccccceEEEEecCCCCCCCCCCEEE
Q 018158 19 DPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI----TMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94 (360)
Q Consensus 19 ~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~----~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~ 94 (360)
.+++++++++.+.|+ +++||+|||++++||++|+++++|.+.. ..+|.++|||++|+|+++|.+ .|++||||+
T Consensus 9 ~~~~~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~~vGdrV~ 85 (341)
T cd08237 9 VRPKFFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TYKVGTKVV 85 (341)
T ss_pred eccceEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--ccCCCCEEE
Confidence 455799999999995 9999999999999999999999987532 357999999999999998874 799999998
Q ss_pred eccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchh
Q 018158 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPM 174 (360)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l 174 (360)
+.+.. +|+ |++|. ..+.|.+..+. | ...+|+|+||+.+|+++++++|+++++++|+.+ ..+.++|+++
T Consensus 86 ~~~~~-~~~-~~~~~--~~~~c~~~~~~--g-----~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~-~~~~~a~~a~ 153 (341)
T cd08237 86 MVPNT-PVE-KDEII--PENYLPSSRFR--S-----SGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFT-ELVSVGVHAI 153 (341)
T ss_pred ECCCC-Cch-hcccc--hhccCCCccee--E-----ecCCCceEEEEEEchHHeEECCCCCChHHhhhh-chHHHHHHHH
Confidence 87654 376 55664 55778764321 2 134699999999999999999999999887644 5778889988
Q ss_pred hccCCCCCCCCcEEEEEcCChHHHHHHHHHHH-cC-CeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEE
Q 018158 175 KDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKA-FG-HHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFI 252 (360)
Q Consensus 175 ~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~-~G-~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~v 252 (360)
.......+++|++|+|+|+|++|++++|+++. +| .+|++++++++|++.+++ ++++..++ + .. ...++|++
T Consensus 154 ~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~-~~~~~~~~--~---~~-~~~g~d~v 226 (341)
T cd08237 154 SRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSF-ADETYLID--D---IP-EDLAVDHA 226 (341)
T ss_pred HHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhh-cCceeehh--h---hh-hccCCcEE
Confidence 65433224489999999999999999999996 55 579999999999999887 77654432 1 11 12369999
Q ss_pred EEcCCC---cccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcC-----CCcc
Q 018158 253 LDTVSA---KHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKY-----NITC 324 (360)
Q Consensus 253 id~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-----~l~~ 324 (360)
||++|+ ...+..++++++++|+++.+|......+++...++.+++++.++.....++++++++++.++ ++++
T Consensus 227 iD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 306 (341)
T cd08237 227 FECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLSRNPEVAEYLRK 306 (341)
T ss_pred EECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHHHHHHhCCcccCChHH
Confidence 999994 34688999999999999999976555566777788899999999887778899999999998 4566
Q ss_pred ce-EEECCcc---HHHHHHHHHcCCCceeEEEecC
Q 018158 325 NI-EVIKPDQ---INEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 325 ~i-~~~~~~~---~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
.+ ++|++++ +.++++.+.++ ..||+|++++
T Consensus 307 ~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~ 340 (341)
T cd08237 307 LVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE 340 (341)
T ss_pred HhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence 66 8899865 55555555444 5799999874
|
NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase ( |
| >cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-46 Score=341.44 Aligned_cols=335 Identities=56% Similarity=0.994 Sum_probs=294.2
Q ss_pred EeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEE
Q 018158 15 WAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94 (360)
Q Consensus 15 ~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~ 94 (360)
|..+....+|++++++.|++.++||+||++++++|++|++.+.|.+....+|.++|||++|+|+++|+++++|++||+|+
T Consensus 3 ~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 82 (337)
T cd05283 3 YAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDRVG 82 (337)
T ss_pred eEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCEEE
Confidence 55667779999999999999999999999999999999999988775556688999999999999999999999999998
Q ss_pred eccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchh
Q 018158 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPM 174 (360)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l 174 (360)
+.+..+.|++|.+|..+..++|....+...|....+....|+|++|+.++.+.++++|+++++++++.+++.+.+||+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~ 162 (337)
T cd05283 83 VGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPL 162 (337)
T ss_pred EecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHH
Confidence 77788899999999999999998765443343333335579999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEE
Q 018158 175 KDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 175 ~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid 254 (360)
.... ++++++++|.|+|++|++++++|+.+|++|+++++++++++.+++ +|++.+++..+........+++|++||
T Consensus 163 ~~~~---~~~g~~vlV~g~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~d~v~~ 238 (337)
T cd05283 163 KRNG---VGPGKRVGVVGIGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALK-LGADEFIATKDPEAMKKAAGSLDLIID 238 (337)
T ss_pred HhcC---CCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-cCCcEEecCcchhhhhhccCCceEEEE
Confidence 8765 449999999888999999999999999999999999999999977 999998887765444444678999999
Q ss_pred cCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccceEEECCccH
Q 018158 255 TVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIEVIKPDQI 334 (360)
Q Consensus 255 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~ 334 (360)
|+|....+..++++++++|+++.+|.......++...++.+++++.++.....++++.+++++.++++++.++.|+++++
T Consensus 239 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 318 (337)
T cd05283 239 TVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAEHGIKPWVEVIPMDGI 318 (337)
T ss_pred CCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHhCCCccceEEEEHHHH
Confidence 99987557999999999999999998765445566667789999999988888899999999999999877789999999
Q ss_pred HHHHHHHHcCCCceeEEEe
Q 018158 335 NEALDRLARNDVRYRFVID 353 (360)
Q Consensus 335 ~~a~~~~~~~~~~gkvvi~ 353 (360)
++|++.+.+++..||+|++
T Consensus 319 ~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 319 NEALERLEKGDVRYRFVLD 337 (337)
T ss_pred HHHHHHHHcCCCcceEeeC
Confidence 9999999999999999875
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic |
| >cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-45 Score=338.45 Aligned_cols=335 Identities=24% Similarity=0.322 Sum_probs=277.3
Q ss_pred EeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCC------CC
Q 018158 15 WAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKN------FK 88 (360)
Q Consensus 15 ~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~------~~ 88 (360)
+......+.+++++++.|+|+++||+||+.++++|++|++...|.++...+|.++|||++|+|+++|++++. |+
T Consensus 4 ~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~~~ 83 (361)
T cd08231 4 AVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEPLK 83 (361)
T ss_pred EEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCccC
Confidence 333444468999999999999999999999999999999999887643567889999999999999999986 99
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecc-eeEECCCCCCccccccccchh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYR-FVVHVPENIAMDAAAPLLCAG 167 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~-~~~~iP~~~~~~~aa~l~~~~ 167 (360)
+||+|++.+. .+|+.|.+|+.+.++.|++..+.-.+.........|+|++|+.++++ .++++|++++.++++++++.+
T Consensus 84 ~Gd~V~~~~~-~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~~ 162 (361)
T cd08231 84 VGDRVTWSVG-APCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCAL 162 (361)
T ss_pred CCCEEEEccc-CCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHhcCHH
Confidence 9999987644 48999999999999999985432111000011246999999999986 799999999999999999999
Q ss_pred hhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHH------
Q 018158 168 ITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAM------ 240 (360)
Q Consensus 168 ~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~------ 240 (360)
.|||+++......+ +++++||+|+|++|++++|+|+.+|+ +|+++++++++.+.+++ +|+++++++++..
T Consensus 163 ~ta~~al~~~~~~~--~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~ 239 (361)
T cd08231 163 ATVLAALDRAGPVG--AGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELARE-FGADATIDIDELPDPQRRA 239 (361)
T ss_pred HHHHHHHHhccCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cCCCeEEcCcccccHHHHH
Confidence 99999998887654 89999999889999999999999999 89999999999998887 9999888776431
Q ss_pred HHHhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC--CcccChhhHhccCcEEEEeecCCHHHHHHHHHH
Q 018158 241 QMQAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA--PFELPSFPLIFGKRSVKGSMTGGMRETQEMMNV 316 (360)
Q Consensus 241 ~~~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 316 (360)
..... ++++|++||++|....+..++++++++|+++.+|.... ...++...++.+++++.++.....+++++++++
T Consensus 240 ~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (361)
T cd08231 240 IVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLYRAVRF 319 (361)
T ss_pred HHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCchhHHHHHHH
Confidence 12222 56899999999876678899999999999999997642 334455556888999999887777889999999
Q ss_pred HhcC--CC--ccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 317 CGKY--NI--TCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 317 l~~~--~l--~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+.++ .+ .+.+ ++|+++++++|++.+.+++. +|++|++
T Consensus 320 ~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 361 (361)
T cd08231 320 LERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP 361 (361)
T ss_pred HHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence 9887 43 3444 88999999999999988874 7999864
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino |
| >cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-45 Score=336.78 Aligned_cols=328 Identities=23% Similarity=0.373 Sum_probs=274.2
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-----------CCCCCCccccccceEEE
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-----------ITMYPVVPGHEITGIIT 78 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-----------~~~~p~~~G~e~~G~V~ 78 (360)
|+|+++. + ++.+++++++.|+|+++||+||+.++++|++|++.+.+... ...+|.++|||++|+|+
T Consensus 1 mka~~~~--~-~~~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~ 77 (351)
T cd08233 1 MKAARYH--G-RKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVV 77 (351)
T ss_pred CceEEEe--c-CCceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEE
Confidence 4555553 3 46899999999999999999999999999999987654210 12368899999999999
Q ss_pred EecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCcc
Q 018158 79 KVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMD 158 (360)
Q Consensus 79 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~ 158 (360)
++|+++++|++||+|++.+ ..+|++|.+|.+|.+++|.+..+ .|.. ..+|+|++|+.++.+.++++|++++++
T Consensus 78 ~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~g~~a~~~~~~~~~~~~lP~~~~~~ 150 (351)
T cd08233 78 EVGSGVTGFKVGDRVVVEP-TIKCGTCGACKRGLYNLCDSLGF--IGLG----GGGGGFAEYVVVPAYHVHKLPDNVPLE 150 (351)
T ss_pred EeCCCCCCCCCCCEEEECC-CCCCCCChHHhCcCcccCCCCce--eccC----CCCCceeeEEEechHHeEECcCCCCHH
Confidence 9999999999999998864 44899999999999999986432 1110 126999999999999999999999999
Q ss_pred ccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCc
Q 018158 159 AAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILST 237 (360)
Q Consensus 159 ~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~ 237 (360)
+++.+ ..+.+||+++.. .. +++|++++|+|+|++|++++|+|+.+|+ +|+++++++++.+.+++ +|++.+++++
T Consensus 151 ~aa~~-~~~~ta~~~l~~-~~--~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~-~ga~~~i~~~ 225 (351)
T cd08233 151 EAALV-EPLAVAWHAVRR-SG--FKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEE-LGATIVLDPT 225 (351)
T ss_pred Hhhhc-cHHHHHHHHHHh-cC--CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hCCCEEECCC
Confidence 88765 677899999844 44 4499999999999999999999999999 79999999999998887 9999999877
Q ss_pred cHHHH---Hhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHH
Q 018158 238 NAMQM---QAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQE 312 (360)
Q Consensus 238 ~~~~~---~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 312 (360)
+.+.. ... ++++|++||++|....+..++++++++|+++.+|.......++...+..+++++.++.....+++++
T Consensus 226 ~~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 305 (351)
T cd08233 226 EVDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEE 305 (351)
T ss_pred ccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHH
Confidence 64322 222 4569999999997667899999999999999999876566677777888999999988777788999
Q ss_pred HHHHHhcCCCcc--ce-EEECCccH-HHHHHHHHcCCCc-eeEEE
Q 018158 313 MMNVCGKYNITC--NI-EVIKPDQI-NEALDRLARNDVR-YRFVI 352 (360)
Q Consensus 313 ~~~~l~~~~l~~--~i-~~~~~~~~-~~a~~~~~~~~~~-gkvvi 352 (360)
++++++++++++ .+ ++|+++++ ++|++.+.+++.. ||+||
T Consensus 306 ~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 306 VIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred HHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 999999999953 45 79999996 7999999998875 89987
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. |
| >TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-44 Score=327.90 Aligned_cols=292 Identities=19% Similarity=0.225 Sum_probs=239.0
Q ss_pred CCCCceEEEEeCCCCCCCeEEEEEeeeecc-cchhhhhccCCCC---CCCCCccccccceEEEEecCCCCCCCCCCEEEe
Q 018158 20 PSGKITPYIFKRRENGVNDVTIKILYCGIC-HTDIHHVKNDWGI---TMYPVVPGHEITGIITKVGSNVKNFKVGDRAAV 95 (360)
Q Consensus 20 ~~~~l~~~~~~~p~~~~~evlVkv~~~~i~-~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 95 (360)
+++.+++++.+.|+|+++||+|||++++|| ++|++.++|.++. ..+|.++|||++|+|+++|+++ +|++||||++
T Consensus 9 ~~~~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~~vGdrV~~ 87 (308)
T TIGR01202 9 GPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GFRPGDRVFV 87 (308)
T ss_pred CCCeEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-CCCCCCEEEE
Confidence 457899999999999999999999999996 6999988887643 3579999999999999999998 6999999986
Q ss_pred ccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhh
Q 018158 96 GCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMK 175 (360)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~ 175 (360)
. |..|..|.. ...|+|+||+.++++.++++|++++++. +.+. ...+||+++.
T Consensus 88 ~-----~~~c~~~~~---------------------~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~ 139 (308)
T TIGR01202 88 P-----GSNCYEDVR---------------------GLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVA 139 (308)
T ss_pred e-----Ccccccccc---------------------ccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHH
Confidence 2 223332211 1249999999999999999999999864 4444 4689999997
Q ss_pred ccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEE
Q 018158 176 DNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 176 ~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid 254 (360)
... . ++++++|+|+|++|++++|+||.+|++ |+++++++++++.+.+ + .++|+.+. .+.++|++||
T Consensus 140 ~~~--~--~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~-~---~~i~~~~~-----~~~g~Dvvid 206 (308)
T TIGR01202 140 GAE--V--KVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATG-Y---EVLDPEKD-----PRRDYRAIYD 206 (308)
T ss_pred hcc--c--CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhh-c---cccChhhc-----cCCCCCEEEE
Confidence 632 2 688999999999999999999999997 6667777777766554 3 44554321 3568999999
Q ss_pred cCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc--ce-EEECC
Q 018158 255 TVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC--NI-EVIKP 331 (360)
Q Consensus 255 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~--~i-~~~~~ 331 (360)
|+|....+..++++++++|+++.+|.......++...++.+++++.++.....++++++++++.++++++ .+ ++|+|
T Consensus 207 ~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~~~~it~~~~l 286 (308)
T TIGR01202 207 ASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGALSLDGLITHQRPA 286 (308)
T ss_pred CCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCCCChhhccceeecH
Confidence 9998767899999999999999999876555666667778889999988777788999999999999975 35 89999
Q ss_pred ccHHHHHHHHHcCCCceeEEEe
Q 018158 332 DQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 332 ~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
+++++|++.+.++...+|++++
T Consensus 287 ~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 287 SDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred HHHHHHHHHHhcCcCceEEEeC
Confidence 9999999998877667899874
|
|
| >cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-42 Score=323.11 Aligned_cols=333 Identities=20% Similarity=0.236 Sum_probs=270.5
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|+|.++. + ++.+.+++.+.|.+.++||+||+.++++|++|++.+.+.+.....|.++|||++|+|+++|+++++|++
T Consensus 1 mka~~~~--~-~~~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~ 77 (351)
T cd08285 1 MKAFAML--G-IGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKP 77 (351)
T ss_pred CceEEEc--c-CCccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCC
Confidence 4555553 3 346889999999999999999999999999999988876654566889999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecc--eeEECCCCCCccccccccchh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYR--FVVHVPENIAMDAAAPLLCAG 167 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~aa~l~~~~ 167 (360)
||+|++.+.. +|+.|..|..|+++.|.+... |+. .+....|+|++|+.++.+ .++++|+++++++++.++..+
T Consensus 78 Gd~V~~~~~~-~~~~c~~c~~g~~~~~~~~~~---~~~-~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~ 152 (351)
T cd08285 78 GDRVIVPAIT-PDWRSVAAQRGYPSQSGGMLG---GWK-FSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMM 152 (351)
T ss_pred CCEEEEcCcC-CCCCCHHHHCcCcccCcCCCC---Ccc-ccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccch
Confidence 9999886654 799999999999999987421 111 122457999999999974 899999999999999999999
Q ss_pred hhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---HH
Q 018158 168 ITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQ---MQ 243 (360)
Q Consensus 168 ~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~ 243 (360)
.|||+++... . +++++++||+|+|++|++++|+|+.+|+ .|+++++++++.+.+++ +|+++++++.+.+. ..
T Consensus 153 ~ta~~~~~~~-~--~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~-~g~~~~v~~~~~~~~~~i~ 228 (351)
T cd08285 153 STGFHGAELA-N--IKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKE-YGATDIVDYKNGDVVEQIL 228 (351)
T ss_pred hhHHHHHHcc-C--CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-cCCceEecCCCCCHHHHHH
Confidence 9999997543 3 4599999999889999999999999999 58999999999888888 99999988765422 22
Q ss_pred hc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC--cccCh--hhHhccCcEEEEeec-CCHHHHHHHHHH
Q 018158 244 AG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP--FELPS--FPLIFGKRSVKGSMT-GGMRETQEMMNV 316 (360)
Q Consensus 244 ~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~--~~~~~~~~~i~~~~~-~~~~~~~~~~~~ 316 (360)
.. ++++|+++|++|....+..++++++++|+++.+|..... ..++. .....+..++.+... ..++++++++++
T Consensus 229 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 308 (351)
T cd08285 229 KLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASL 308 (351)
T ss_pred HHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHH
Confidence 22 467999999999876789999999999999999976542 22221 222345566666543 245678999999
Q ss_pred HhcCCCcc---ce-EEECCccHHHHHHHHHcCCC-ceeEEEec
Q 018158 317 CGKYNITC---NI-EVIKPDQINEALDRLARNDV-RYRFVIDI 354 (360)
Q Consensus 317 l~~~~l~~---~i-~~~~~~~~~~a~~~~~~~~~-~gkvvi~~ 354 (360)
+.+|++++ .+ +.|+++++++|++.+.+++. .+|+++++
T Consensus 309 ~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 309 IEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred HHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 99999987 34 56999999999999999874 58999864
|
This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd05284 arabinose_DH_like D-arabinose dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=320.92 Aligned_cols=331 Identities=30% Similarity=0.464 Sum_probs=280.3
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC---CCCCCCccccccceEEEEecCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG---ITMYPVVPGHEITGIITKVGSNVKN 86 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~ 86 (360)
|+++++... .+.+.+++.+.|++.+++|+||+.++++|++|++...|.++ ...+|.++|+|++|+|+++|+++..
T Consensus 1 ~ka~~~~~~--~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~ 78 (340)
T cd05284 1 MKAARLYEY--GKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDG 78 (340)
T ss_pred CeeeEeccC--CCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCc
Confidence 355555432 25789999999999999999999999999999999888663 3456788999999999999999999
Q ss_pred CCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccch
Q 018158 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCA 166 (360)
Q Consensus 87 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~ 166 (360)
|++||+|++.+.. .|+.|..|..|..++|.+..+. |+ ...|+|++|+.++.+.++++|+++++++++.+++.
T Consensus 79 ~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~ 150 (340)
T cd05284 79 LKEGDPVVVHPPW-GCGTCRYCRRGEENYCENARFP--GI-----GTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADA 150 (340)
T ss_pred CcCCCEEEEcCCC-CCCCChHHhCcCcccCCCCccc--Cc-----cCCCcceeeEEecHHHeEECCCCCCHHHhhhhcch
Confidence 9999999886654 8999999999999999986542 32 45699999999999999999999999999999999
Q ss_pred hhhhhchhhcc-CCCCCCCCcEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcCCCeEeeCccH--HHH
Q 018158 167 GITVFCPMKDN-NLIDSPAKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNA--MQM 242 (360)
Q Consensus 167 ~~ta~~~l~~~-~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--~~~ 242 (360)
+.|||+++... .... ++++++|+|+|++|++++|+|+.+| .+|+++++++++.+.+++ +|+++++++++. ...
T Consensus 151 ~~ta~~~l~~~~~~~~--~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~i 227 (340)
T cd05284 151 GLTAYHAVKKALPYLD--PGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLAER-LGADHVLNASDDVVEEV 227 (340)
T ss_pred HHHHHHHHHHhcccCC--CCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHH-hCCcEEEcCCccHHHHH
Confidence 99999999775 3444 8999999999779999999999999 799999999999999977 999999887764 122
Q ss_pred Hhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcC
Q 018158 243 QAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKY 320 (360)
Q Consensus 243 ~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~ 320 (360)
... +.++|+++|++|.......++++++++|+++.+|.... ..++....+.+++++.++.....+.++.+++++.++
T Consensus 228 ~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 306 (340)
T cd05284 228 RELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESG 306 (340)
T ss_pred HHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhC
Confidence 222 45799999999976578999999999999999987653 334444445688898888776777899999999999
Q ss_pred CCccceEEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 321 NITCNIEVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 321 ~l~~~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
.+++.++.|+++++++|++.+++++..||+++.+
T Consensus 307 ~l~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 307 KVKVEITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred CCCcceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 9987778899999999999999999889999864
|
This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d |
| >PRK10083 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-42 Score=320.02 Aligned_cols=321 Identities=21% Similarity=0.260 Sum_probs=263.5
Q ss_pred CCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCcc
Q 018158 21 SGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAA 100 (360)
Q Consensus 21 ~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 100 (360)
++.+.+++++.|+|+++|++||+.++++|++|++.+.|.++...+|.++|||++|+|+++|++|+.|++||+|++.+..
T Consensus 9 ~~~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~- 87 (339)
T PRK10083 9 PNSLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGERVAVDPVI- 87 (339)
T ss_pred CCeeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCCEEEEcccc-
Confidence 4689999999999999999999999999999999988876544568999999999999999999999999999887655
Q ss_pred CCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCC
Q 018158 101 ACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLI 180 (360)
Q Consensus 101 ~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~ 180 (360)
+|+.|.+|.++++++|....+ . +...+|+|++|+.++.++++++|+++++++++ +...+.++|+++.. ..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~~~~-~~- 157 (339)
T PRK10083 88 SCGHCYPCSIGKPNVCTSLVV--L-----GVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANVTGR-TG- 157 (339)
T ss_pred CCCCCccccCcCcccCCCCce--E-----EEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHHHHh-cC-
Confidence 699999999999999976432 1 11346999999999999999999999998766 55667778865543 34
Q ss_pred CCCCCcEEEEEcCChHHHHHHHHHHH-cCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhc---CCCcCEEEEc
Q 018158 181 DSPAKKRIGIVGLGGLGHVAVKFGKA-FGHH-VTVISTSPSKEKEAKELLGADEFILSTNAMQMQAG---KRTLDFILDT 255 (360)
Q Consensus 181 ~~~~~~~vlI~Gag~vG~~aiqla~~-~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~---~~~~d~vid~ 255 (360)
+++|++|+|+|+|++|++++|+|+. +|++ ++++++++++++.+++ +|+++++++++....+.. +.++|++||+
T Consensus 158 -~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~-~Ga~~~i~~~~~~~~~~~~~~g~~~d~vid~ 235 (339)
T PRK10083 158 -PTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKE-SGADWVINNAQEPLGEALEEKGIKPTLIIDA 235 (339)
T ss_pred -CCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHH-hCCcEEecCccccHHHHHhcCCCCCCEEEEC
Confidence 4499999999999999999999996 6995 7778888999998888 999999987654222222 3346799999
Q ss_pred CCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc--ce-EEECCc
Q 018158 256 VSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC--NI-EVIKPD 332 (360)
Q Consensus 256 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~--~i-~~~~~~ 332 (360)
+|....+..++++++++|+++.+|.......+....+..+++++.++.. ..+.++.+++++.++.+++ .+ +.|+++
T Consensus 236 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~ 314 (339)
T PRK10083 236 ACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRL-NANKFPVVIDWLSKGLIDPEKLITHTFDFQ 314 (339)
T ss_pred CCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEec-ChhhHHHHHHHHHcCCCChHHheeeeecHH
Confidence 9976678999999999999999997654333344444567777777654 4567899999999999976 24 899999
Q ss_pred cHHHHHHHHHcCC-CceeEEEecC
Q 018158 333 QINEALDRLARND-VRYRFVIDIA 355 (360)
Q Consensus 333 ~~~~a~~~~~~~~-~~gkvvi~~~ 355 (360)
++++|++.+.+++ ..+|+++++.
T Consensus 315 ~~~~a~~~~~~~~~~~~kvvv~~~ 338 (339)
T PRK10083 315 HVADAIELFEKDQRHCCKVLLTFA 338 (339)
T ss_pred HHHHHHHHHhcCCCceEEEEEecC
Confidence 9999999998654 4589999875
|
|
| >cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-42 Score=321.74 Aligned_cols=336 Identities=24% Similarity=0.376 Sum_probs=266.9
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|++.++ ..+++.++++++|.|++.++||+||++++++|++|++.+.|.+ ...+|.++|||++|+|+++|++++.|++
T Consensus 8 ~~a~~~--~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~-~~~~p~v~G~e~~G~V~~vG~~v~~~~~ 84 (373)
T cd08299 8 CKAAVL--WEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKL-VTPFPVILGHEAAGIVESVGEGVTTVKP 84 (373)
T ss_pred eEEEEE--ecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCC-CCCCCccccccceEEEEEeCCCCccCCC
Confidence 444433 4555679999999999999999999999999999999998876 3457889999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCccccccc-ccccccC--------C-----CccccceeeEEEeecceeEECCCCC
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFT-YNGIFWD--------G-----SITYGGYSEMLVADYRFVVHVPENI 155 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~g~~~~--------~-----~~~~g~~~~~~~v~~~~~~~iP~~~ 155 (360)
||+|++.+ ..+|++|.+|..++++.|+..... ..|+... | ....|+|+||+.++.++++++|+++
T Consensus 85 Gd~V~~~~-~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l 163 (373)
T cd08299 85 GDKVIPLF-VPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAA 163 (373)
T ss_pred CCEEEECC-CCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCC
Confidence 99998755 679999999999999999874321 1111100 0 1136899999999999999999999
Q ss_pred CccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEe
Q 018158 156 AMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFI 234 (360)
Q Consensus 156 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v 234 (360)
++++++++++.+.+||+++.....++ ++++++|+|+|++|++++++|+.+|+ +|+++++++++++.+++ +|+++++
T Consensus 164 ~~~~aa~~~~~~~ta~~~~~~~~~~~--~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~-lGa~~~i 240 (373)
T cd08299 164 PLEKVCLIGCGFSTGYGAAVNTAKVT--PGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKE-LGATECI 240 (373)
T ss_pred ChHHhheeccchHHHHHHHHhccCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cCCceEe
Confidence 99999999999999999876655544 99999999889999999999999999 79999999999999988 9999988
Q ss_pred eCccHH-----HHHh-cCCCcCEEEEcCCCcccHHHHHHHh-ccCCEEEEeCCCCCC--cccChhhHhccCcEEEEeecC
Q 018158 235 LSTNAM-----QMQA-GKRTLDFILDTVSAKHSLGPILELL-KVNGTLSVVGAPEAP--FELPSFPLIFGKRSVKGSMTG 305 (360)
Q Consensus 235 ~~~~~~-----~~~~-~~~~~d~vid~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~ 305 (360)
+..+.+ .... ..+++|+++||+|....+..++..+ +++|+++.+|..... .++... .+.++.++.++...
T Consensus 241 ~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~~~~~~ 319 (373)
T cd08299 241 NPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPM-LLLTGRTWKGAVFG 319 (373)
T ss_pred cccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHH-HHhcCCeEEEEEec
Confidence 765421 1111 2457999999999766677766655 579999999976532 333332 23456788887664
Q ss_pred C---HHHHHHHHHHHhcCCCc--cce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 306 G---MRETQEMMNVCGKYNIT--CNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 306 ~---~~~~~~~~~~l~~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
. .+++.++++.+.++.++ +.+ +.|+++++++|++.+.+++. .|+++++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~ 373 (373)
T cd08299 320 GWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF 373 (373)
T ss_pred CCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence 3 24666777777766543 334 89999999999999988775 4888754
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically |
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=328.48 Aligned_cols=319 Identities=16% Similarity=0.227 Sum_probs=251.3
Q ss_pred eeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhh-ccCCCC------CCCCCccccccceEEEEecCCC
Q 018158 12 VVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHV-KNDWGI------TMYPVVPGHEITGIITKVGSNV 84 (360)
Q Consensus 12 ~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~-~g~~~~------~~~p~~~G~e~~G~V~~vG~~v 84 (360)
++++..+++ +.++++++|.|+++++||+|||.+++||++|++.+ .|.... ..+|.++|||++|+|+++|++|
T Consensus 3 ~~a~~~~~~-~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v 81 (410)
T cd08238 3 TKAWRMYGK-GDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKKW 81 (410)
T ss_pred cEEEEEEcC-CceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCCCc
Confidence 334444554 57999999999999999999999999999999976 453211 2368899999999999999999
Q ss_pred C-CCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecc----eeEECCCCCCccc
Q 018158 85 K-NFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYR----FVVHVPENIAMDA 159 (360)
Q Consensus 85 ~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~----~~~~iP~~~~~~~ 159 (360)
+ .|++||||++.+. ..|+.|..|. + + +...+|+|+||+.++++ +++++|+++++++
T Consensus 82 ~~~~~vGdrV~~~~~-~~c~~~~~c~-~---~--------------g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~ 142 (410)
T cd08238 82 QGKYKPGQRFVIQPA-LILPDGPSCP-G---Y--------------SYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAE 142 (410)
T ss_pred cCCCCCCCEEEEcCC-cCCCCCCCCC-C---c--------------cccCCCcceEEEEecHHhccCCeEECCCCCCHHH
Confidence 8 5999999987644 3688887762 1 0 11346999999999987 6899999999998
Q ss_pred cccc-c--chhhhhhchhh--------ccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCC---eEEEEeCChhHHHHH
Q 018158 160 AAPL-L--CAGITVFCPMK--------DNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGH---HVTVISTSPSKEKEA 224 (360)
Q Consensus 160 aa~l-~--~~~~ta~~~l~--------~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~---~V~~~~~~~~~~~~~ 224 (360)
++.+ + +. .++++++. .... +++|++|+|+|+ |++|++++|+|+.+|+ +|++++++++|++.+
T Consensus 143 aal~epl~~~-~~~~~a~~~~~~~~~~~~~~--~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a 219 (410)
T cd08238 143 ASLVEPLSCV-IGAYTANYHLQPGEYRHRMG--IKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARA 219 (410)
T ss_pred HhhcchHHHH-HHHhhhcccccccchhhhcC--CCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHH
Confidence 8754 2 32 23344332 2233 459999999986 9999999999999864 799999999999999
Q ss_pred HHHc--------CCC-eEeeCcc-H---HHHHh--cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCC-CC--Ccc
Q 018158 225 KELL--------GAD-EFILSTN-A---MQMQA--GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAP-EA--PFE 286 (360)
Q Consensus 225 ~~~~--------g~~-~~v~~~~-~---~~~~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~--~~~ 286 (360)
++ + |++ .++++.+ . ..... .++++|++||++|....+..++++++++|+++.++.. .. ..+
T Consensus 220 ~~-~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~ 298 (410)
T cd08238 220 QR-LFPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAP 298 (410)
T ss_pred HH-hccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCcccc
Confidence 88 6 665 4676643 1 11222 2568999999998877889999999999988776432 22 245
Q ss_pred cChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc--ce-EEECCccHHHHHHHHHcCCCceeEEEecC
Q 018158 287 LPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC--NI-EVIKPDQINEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 287 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
++...++.+++++.|+.....++++++++++.+|++++ .+ ++|+|+++++|++.+. ++..||+|+.++
T Consensus 299 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~ 369 (410)
T cd08238 299 LNFYNVHYNNTHYVGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQ 369 (410)
T ss_pred ccHHHhhhcCcEEEEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECC
Confidence 66667888999999998878889999999999999977 45 8999999999999999 777899999874
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-42 Score=317.08 Aligned_cols=318 Identities=28% Similarity=0.498 Sum_probs=271.3
Q ss_pred EEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCccCCCCC
Q 018158 26 PYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMEC 105 (360)
Q Consensus 26 ~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~ 105 (360)
++++|.|+++++||+||++++++|++|++.+.|.++ ...|.++|||++|+|+++|++++.|++||+|++.+....|+.|
T Consensus 15 ~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~ 93 (338)
T PRK09422 15 VVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFG-DKTGRILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHC 93 (338)
T ss_pred EEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCC-CCCCccCCcccceEEEEECCCCccCCCCCEEEEccCCCCCCCC
Confidence 899999999999999999999999999998888663 2346789999999999999999999999999998888999999
Q ss_pred hhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCC
Q 018158 106 EFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAK 185 (360)
Q Consensus 106 ~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~ 185 (360)
.+|..+..++|.+..+ .+....|+|++|+.++.++++++|+++++++++.++..+.|||+++. ...+ +++
T Consensus 94 ~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~~-~~~~--~~g 163 (338)
T PRK09422 94 EYCTTGRETLCRSVKN-------AGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAIK-VSGI--KPG 163 (338)
T ss_pred hhhcCCCcccCCCccc-------cCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHHH-hcCC--CCC
Confidence 9999999999987532 12245799999999999999999999999999999999999999984 3444 499
Q ss_pred cEEEEEcCChHHHHHHHHHHH-cCCeEEEEeCChhHHHHHHHHcCCCeEeeCcc-H---HHHHhcCCCcCEEEEcCCCcc
Q 018158 186 KRIGIVGLGGLGHVAVKFGKA-FGHHVTVISTSPSKEKEAKELLGADEFILSTN-A---MQMQAGKRTLDFILDTVSAKH 260 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~-~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~-~---~~~~~~~~~~d~vid~~g~~~ 260 (360)
++++|+|+|++|++++++|+. .|++|+++++++++++.+++ +|++.+++++. . ........++|+++++.+...
T Consensus 164 ~~vlV~g~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~v~~~~~~~d~vi~~~~~~~ 242 (338)
T PRK09422 164 QWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKE-VGADLTINSKRVEDVAKIIQEKTGGAHAAVVTAVAKA 242 (338)
T ss_pred CEEEEECCcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHH-cCCcEEecccccccHHHHHHHhcCCCcEEEEeCCCHH
Confidence 999999999999999999998 49999999999999999977 99998888754 2 222223337896665555556
Q ss_pred cHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccceEEECCccHHHHHHH
Q 018158 261 SLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIEVIKPDQINEALDR 340 (360)
Q Consensus 261 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~a~~~ 340 (360)
.+..++++++.+|+++.+|.......++...+..++.++.++.....++++.+++++.++.+.+.++.++++++++|++.
T Consensus 243 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~v~~~~~~~~~~a~~~ 322 (338)
T PRK09422 243 AFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKVVPKVQLRPLEDINDIFDE 322 (338)
T ss_pred HHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCCCccEEEEcHHHHHHHHHH
Confidence 78999999999999999987654455555666778888888776667889999999999998776777999999999999
Q ss_pred HHcCCCceeEEEecC
Q 018158 341 LARNDVRYRFVIDIA 355 (360)
Q Consensus 341 ~~~~~~~gkvvi~~~ 355 (360)
+.+++..||+++++.
T Consensus 323 ~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 323 MEQGKIQGRMVIDFT 337 (338)
T ss_pred HHcCCccceEEEecC
Confidence 999998999998753
|
|
| >cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-42 Score=320.02 Aligned_cols=335 Identities=24% Similarity=0.372 Sum_probs=273.9
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|+|.++ .++.+.+++++.+.|++.++||+||+.++++|++|++...|.++ ..+|.++|||++|+|+++|++++.|++
T Consensus 3 ~~a~~~--~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08278 3 TTAAVV--REPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP 79 (365)
T ss_pred cEEeee--ccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence 555555 44445789999999999999999999999999999999988763 456789999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCccccccc-ccccccCC---------------CccccceeeEEEeecceeEECCC
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFT-YNGIFWDG---------------SITYGGYSEMLVADYRFVVHVPE 153 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~g~~~~~---------------~~~~g~~~~~~~v~~~~~~~iP~ 153 (360)
||+|++.+ . .|+.|..|..++.++|.+.... +.|....| ....|+|++|+.+++++++++|+
T Consensus 80 Gd~V~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~ 157 (365)
T cd08278 80 GDHVVLSF-A-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDK 157 (365)
T ss_pred CCEEEEcc-c-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCC
Confidence 99998854 3 7999999999999999874322 22221111 12358999999999999999999
Q ss_pred CCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCe
Q 018158 154 NIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADE 232 (360)
Q Consensus 154 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~ 232 (360)
++++++++.+++++.|||.++.....++ ++++++|+|+|++|++++|+|+.+|+ +|+++++++++.+.+++ +|++.
T Consensus 158 ~~s~~~a~~l~~~~~ta~~~~~~~~~~~--~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~-~g~~~ 234 (365)
T cd08278 158 DVPLELLAPLGCGIQTGAGAVLNVLKPR--PGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKE-LGATH 234 (365)
T ss_pred CCCHHHhhhhcchhhhhhHHHhhhcCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-cCCcE
Confidence 9999999999999999999987666655 99999999889999999999999999 59999999999988887 99998
Q ss_pred EeeCccHHH---HHh-cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC--CCcccChhhHhccCcEEEEeecC-
Q 018158 233 FILSTNAMQ---MQA-GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE--APFELPSFPLIFGKRSVKGSMTG- 305 (360)
Q Consensus 233 ~v~~~~~~~---~~~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~- 305 (360)
++++.+.+. ... .+.++|+++||+|....+..++++++++|+++.+|... ....++...++.++.++.++...
T Consensus 235 ~i~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (365)
T cd08278 235 VINPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGD 314 (365)
T ss_pred EecCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCC
Confidence 888765322 211 15689999999997767899999999999999999753 23455555665788888776543
Q ss_pred --CHHHHHHHHHHHhcCCCcc--ceEEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 306 --GMRETQEMMNVCGKYNITC--NIEVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 306 --~~~~~~~~~~~l~~~~l~~--~i~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
..+.++++++++.++++.+ .++.|+++++++|++.+++++.. |++++
T Consensus 315 ~~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 365 (365)
T cd08278 315 SVPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR 365 (365)
T ss_pred cChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence 2355688889999998854 34789999999999999987764 88774
|
Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu |
| >cd08246 crotonyl_coA_red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-42 Score=325.15 Aligned_cols=339 Identities=18% Similarity=0.224 Sum_probs=277.8
Q ss_pred CCCcccceeEEec--cC-CCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC----------CCCCCCcccc
Q 018158 5 TPNHTQSVVGWAA--HD-PSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG----------ITMYPVVPGH 71 (360)
Q Consensus 5 ~~~~~~~~~~~~~--~~-~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~----------~~~~p~~~G~ 71 (360)
+|.+ |+++++.. ++ +.+.+++++++.|+++++||+||+.++++|++|++.+.+... ....+.++||
T Consensus 9 ~~~~-~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~ 87 (393)
T cd08246 9 VPEK-MYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGS 87 (393)
T ss_pred Cchh-hhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCcccccc
Confidence 6888 56665542 23 234689999999999999999999999999999988776411 0112358899
Q ss_pred ccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEEC
Q 018158 72 EITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV 151 (360)
Q Consensus 72 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~i 151 (360)
|++|+|+++|++++.|++||+|++.+. ..|+.|..|..+..++|.... +.|+. ...|+|++|+.++.+.++++
T Consensus 88 e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~~~~~~~~~~~--~~g~~----~~~g~~a~y~~v~~~~l~~i 160 (393)
T cd08246 88 DASGIVWAVGEGVKNWKVGDEVVVHCS-VWDGNDPERAGGDPMFDPSQR--IWGYE----TNYGSFAQFALVQATQLMPK 160 (393)
T ss_pred ceEEEEEEeCCCCCcCCCCCEEEEecc-ccccCcccccccccccccccc--ccccc----CCCCcceeEEEechHHeEEC
Confidence 999999999999999999999987654 468899999999999998632 22321 35699999999999999999
Q ss_pred CCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC
Q 018158 152 PENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA 230 (360)
Q Consensus 152 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~ 230 (360)
|+++++++++.+++.+.|||+++.......++++++++|+|+ |++|++++++|+.+|++++++++++++++.+++ +|+
T Consensus 161 P~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~-~G~ 239 (393)
T cd08246 161 PKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRA-LGA 239 (393)
T ss_pred CCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH-cCC
Confidence 999999999999999999999987652112449999999998 999999999999999999999999999999988 999
Q ss_pred CeEeeCccHH-------------------------HHHhc--CC-CcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 231 DEFILSTNAM-------------------------QMQAG--KR-TLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 231 ~~~v~~~~~~-------------------------~~~~~--~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+++++.++.+ ..... +. ++|++||++|.. .+..++++++++|+++.+|...
T Consensus 240 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~ 318 (393)
T cd08246 240 EGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRA-TFPTSVFVCDRGGMVVICAGTT 318 (393)
T ss_pred CEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchH-hHHHHHHHhccCCEEEEEcccC
Confidence 9888764321 11111 34 799999999874 6789999999999999998654
Q ss_pred C-CcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcC-CCceeEEEe
Q 018158 283 A-PFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARN-DVRYRFVID 353 (360)
Q Consensus 283 ~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~-~~~gkvvi~ 353 (360)
. ...+....+..++.++.++....++++..+++++.++.+.+.+ ++|+++++++|++.+.++ +..||+++.
T Consensus 319 ~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~ 392 (393)
T cd08246 319 GYNHTYDNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAVL 392 (393)
T ss_pred CCCCCCcHHHHhhheeEEEecccCcHHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence 3 2344556677788889988877778899999999999998655 899999999999999998 788999874
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma |
| >cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=319.47 Aligned_cols=337 Identities=20% Similarity=0.275 Sum_probs=273.7
Q ss_pred cceeEEeccCCCCCceEEEEeCCCC-CCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRREN-GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|+|+++. +++.+++++++.|.| .+++|+||+.++++|++|++.+.|.++..++|.++|||++|+|+++|++++.|+
T Consensus 1 m~a~~~~---~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 77 (386)
T cd08283 1 MKALVWH---GKGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLK 77 (386)
T ss_pred CeeEEEe---cCCCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCC
Confidence 4555553 457899999999988 599999999999999999999999876556788999999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccc--c--------ccccCC---CccccceeeEEEeecc--eeEECCC
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTY--N--------GIFWDG---SITYGGYSEMLVADYR--FVVHVPE 153 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~--~--------g~~~~~---~~~~g~~~~~~~v~~~--~~~~iP~ 153 (360)
+||+|++.+.. .|++|.+|..+.+++|++..... . |+.-.+ ....|+|++|+.++.+ .++++|+
T Consensus 78 ~Gd~V~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~ 156 (386)
T cd08283 78 VGDRVVVPFTI-ACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPD 156 (386)
T ss_pred CCCEEEEcCcC-CCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCC
Confidence 99999876554 69999999999999999743221 0 110000 0136999999999988 8999999
Q ss_pred CCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCe
Q 018158 154 NIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADE 232 (360)
Q Consensus 154 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~ 232 (360)
+++++++++++..+.+||+++ ....+. ++++|+|+|+|++|++++++|+.+|+ +|+++++++++.+.+++ ++...
T Consensus 157 ~~~~~~aa~l~~~~~ta~~~l-~~~~~~--~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~-~~~~~ 232 (386)
T cd08283 157 DLSDEKALFLSDILPTGYHAA-ELAEVK--PGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARS-HLGAE 232 (386)
T ss_pred CCCHHHHhhhccchhhhHHHH-hhccCC--CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-cCCcE
Confidence 999999999999999999999 555544 99999999889999999999999998 59999999999999998 74446
Q ss_pred EeeCccHH-H---HHhc--CCCcCEEEEcCCCc---------------------ccHHHHHHHhccCCEEEEeCCCCC-C
Q 018158 233 FILSTNAM-Q---MQAG--KRTLDFILDTVSAK---------------------HSLGPILELLKVNGTLSVVGAPEA-P 284 (360)
Q Consensus 233 ~v~~~~~~-~---~~~~--~~~~d~vid~~g~~---------------------~~~~~~~~~l~~~G~~v~~g~~~~-~ 284 (360)
++++.+.+ . .... ++++|++||++|+. ..+..++++++++|+++.+|.... .
T Consensus 233 vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~ 312 (386)
T cd08283 233 TINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTV 312 (386)
T ss_pred EEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCc
Confidence 66665432 2 2222 35799999999753 256889999999999999987654 2
Q ss_pred cccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc--ce-EEECCccHHHHHHHHHcCC-CceeEEEec
Q 018158 285 FELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC--NI-EVIKPDQINEALDRLARND-VRYRFVIDI 354 (360)
Q Consensus 285 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~-~~gkvvi~~ 354 (360)
..++...++.+++++.++.....+.++.+++++.++++.+ .+ +.|+++++++|++.+.+++ ..+|+++++
T Consensus 313 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 313 NKFPIGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred CccCHHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 3344445678888988876666677899999999999876 24 8999999999999998877 458999863
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T |
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-42 Score=315.79 Aligned_cols=303 Identities=19% Similarity=0.238 Sum_probs=248.4
Q ss_pred cceeEEeccCCC---CCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC-CCCCCccccccceEEEEecCCCC
Q 018158 10 QSVVGWAAHDPS---GKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIITKVGSNVK 85 (360)
Q Consensus 10 ~~~~~~~~~~~~---~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~ 85 (360)
|++.++...+++ ..++++++|.|.|+++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 455666555544 57889999999999999999999999999999999887642 35688999999999999999999
Q ss_pred C-CCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCcccccccc
Q 018158 86 N-FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLL 164 (360)
Q Consensus 86 ~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~ 164 (360)
+ |++||+|++.+ ..+|+|++|+.++++.++++|++++++++++++
T Consensus 81 ~~~~vGd~V~~~~----------------------------------~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~ 126 (324)
T cd08291 81 AQSLIGKRVAFLA----------------------------------GSYGTYAEYAVADAQQCLPLPDGVSFEQGASSF 126 (324)
T ss_pred ccCCCCCEEEecC----------------------------------CCCCcchheeeecHHHeEECCCCCCHHHHhhhc
Confidence 6 99999998521 114999999999999999999999999999999
Q ss_pred chhhhhhchhhccCCCCCCCCcEEEEE-cC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH
Q 018158 165 CAGITVFCPMKDNNLIDSPAKKRIGIV-GL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM 242 (360)
Q Consensus 165 ~~~~ta~~~l~~~~~~~~~~~~~vlI~-Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 242 (360)
+.+.|||.++.... . ++++++|+ |+ |++|++++|+|+.+|++|+++++++++++.+++ +|+++++++++.+..
T Consensus 127 ~~~~ta~~~~~~~~---~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~ 201 (324)
T cd08291 127 VNPLTALGMLETAR---E-EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-IGAEYVLNSSDPDFL 201 (324)
T ss_pred ccHHHHHHHHHhhc---c-CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcEEEECCCccHH
Confidence 99999986554332 2 45556554 55 999999999999999999999999999999998 999999987764322
Q ss_pred ---Hhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-c-ccChhhHhccCcEEEEeecCC------HHH
Q 018158 243 ---QAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-F-ELPSFPLIFGKRSVKGSMTGG------MRE 309 (360)
Q Consensus 243 ---~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-~~~~~~~~~~~~~i~~~~~~~------~~~ 309 (360)
... ++++|++||++|... ....+++++++|+++.+|..... . .++...++.+++++.++.... .++
T Consensus 202 ~~v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (324)
T cd08291 202 EDLKELIAKLNATIFFDAVGGGL-TGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEV 280 (324)
T ss_pred HHHHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHH
Confidence 222 468999999999874 57789999999999999875432 2 244556677899998876532 356
Q ss_pred HHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 310 TQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 310 ~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
++.+++++. +.+++.+ ++|+|+++++|++.+.+++..||+++.
T Consensus 281 ~~~~~~~~~-~~~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 281 VKKLKKLVK-TELKTTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred HHHHHHHHh-CccccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 788888887 8898877 899999999999999999989999873
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=314.17 Aligned_cols=326 Identities=27% Similarity=0.426 Sum_probs=275.6
Q ss_pred cCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC------------CCCCCCccccccceEEEEecCCCC
Q 018158 18 HDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG------------ITMYPVVPGHEITGIITKVGSNVK 85 (360)
Q Consensus 18 ~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~------------~~~~p~~~G~e~~G~V~~vG~~v~ 85 (360)
..+...++++++|.|+++++||+||+.++++|++|++.+.|.++ ...+|.++|||++|+|+++|++++
T Consensus 7 ~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~ 86 (350)
T cd08240 7 VEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVAVGPDAA 86 (350)
T ss_pred ccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEeeCCCCC
Confidence 34445689999999999999999999999999999999887543 123467899999999999999999
Q ss_pred CCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccc
Q 018158 86 NFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLC 165 (360)
Q Consensus 86 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~ 165 (360)
.+++||+|++.+.. .|++|..|.++.+++|....+ .|+ ...|++++|+.++.+.++++|+++++.+++.+++
T Consensus 87 ~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~-----~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~ 158 (350)
T cd08240 87 DVKVGDKVLVYPWI-GCGECPVCLAGDENLCAKGRA--LGI-----FQDGGYAEYVIVPHSRYLVDPGGLDPALAATLAC 158 (350)
T ss_pred CCCCCCEEEECCcC-CCCCChHHHCcCcccCCCCCc--eee-----eccCcceeeEEecHHHeeeCCCCCCHHHeehhhc
Confidence 99999999886655 899999999999999976321 121 3568999999999999999999999999999999
Q ss_pred hhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---
Q 018158 166 AGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQ--- 241 (360)
Q Consensus 166 ~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~--- 241 (360)
.+.+||+++....... ++++++|+|+|++|++++|+|+.+|+ +|+++++++++++.+++ +|++.+++.++.+.
T Consensus 159 ~~~tA~~~~~~~~~~~--~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~ 235 (350)
T cd08240 159 SGLTAYSAVKKLMPLV--ADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA-AGADVVVNGSDPDAAKR 235 (350)
T ss_pred hhhhHHHHHHhcccCC--CCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-hCCcEEecCCCccHHHH
Confidence 9999999998877654 89999999889999999999999999 69999999999999977 99988887765422
Q ss_pred HHhc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcC
Q 018158 242 MQAG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKY 320 (360)
Q Consensus 242 ~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~ 320 (360)
.... ++++|++||++|....+..++++|+++|+++.+|............+..++.++.++.....+++..++++++++
T Consensus 236 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ll~~~ 315 (350)
T cd08240 236 IIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVALAKAG 315 (350)
T ss_pred HHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHHHHHHcC
Confidence 2222 338999999999766789999999999999999876544344444455688899888877778899999999999
Q ss_pred CCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 321 NITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 321 ~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
.+++.. +.|+++++++|++.+.+++..||+++++
T Consensus 316 ~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 350 (350)
T cd08240 316 KLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLKP 350 (350)
T ss_pred CCccceeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence 987654 8999999999999999998889999853
|
6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy |
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=314.07 Aligned_cols=314 Identities=18% Similarity=0.166 Sum_probs=249.7
Q ss_pred CCCCCCCcccceeEEecc----CCCCCceEEEE---eCC-CCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCcccc-
Q 018158 1 MAQTTPNHTQSVVGWAAH----DPSGKITPYIF---KRR-ENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGH- 71 (360)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~---~~p-~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~- 71 (360)
||..-+.+ .+.+.+..+ -....|++++. +.| ++++||||||+.++++|+.|...+.+......+|.++|+
T Consensus 1 ~~~~~~~~-~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~ 79 (348)
T PLN03154 1 MMEGQVVE-NKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQR 79 (348)
T ss_pred CCCCcccc-ceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCe
Confidence 77776666 343333222 12236777773 555 358999999999999999988654432222345788998
Q ss_pred -ccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecce--e
Q 018158 72 -EITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRF--V 148 (360)
Q Consensus 72 -e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~--~ 148 (360)
|++|+|+.+|+++++|++||+|+. .|+|+||+.++.+. +
T Consensus 80 ~~~~G~v~~vg~~v~~~~~Gd~V~~--------------------------------------~~~~aey~~v~~~~~~~ 121 (348)
T PLN03154 80 IEGFGVSKVVDSDDPNFKPGDLISG--------------------------------------ITGWEEYSLIRSSDNQL 121 (348)
T ss_pred eEeeEEEEEEecCCCCCCCCCEEEe--------------------------------------cCCcEEEEEEeccccce
Confidence 889999999999999999999974 26899999998753 5
Q ss_pred EE--CCCCCCcc-ccccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHH
Q 018158 149 VH--VPENIAMD-AAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEA 224 (360)
Q Consensus 149 ~~--iP~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~ 224 (360)
++ +|++++++ +++++++++.|||+++.....++ +|++|+|+|+ |++|++++|+||.+|++|+++++++++++.+
T Consensus 122 ~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~--~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~ 199 (348)
T PLN03154 122 RKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPK--KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLL 199 (348)
T ss_pred EEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCC--CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence 44 59999986 68899999999999997766655 9999999999 9999999999999999999999999999998
Q ss_pred HHHcCCCeEeeCccH-H---HHHhc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-cc-----cChhhHh
Q 018158 225 KELLGADEFILSTNA-M---QMQAG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-FE-----LPSFPLI 293 (360)
Q Consensus 225 ~~~~g~~~~v~~~~~-~---~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~-----~~~~~~~ 293 (360)
++.+|+++++++++. + ..... ++++|++||++|.. .+..++++++++|+++.+|...+. .. .+...++
T Consensus 200 ~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~ 278 (348)
T PLN03154 200 KNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGD-MLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLI 278 (348)
T ss_pred HHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHh
Confidence 734999999988642 1 12222 45899999999975 679999999999999999976432 11 2445577
Q ss_pred ccCcEEEEeecCC-----HHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEecCC
Q 018158 294 FGKRSVKGSMTGG-----MRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDIAG 356 (360)
Q Consensus 294 ~~~~~i~~~~~~~-----~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~ 356 (360)
.+++++.++.... .+.++++++++++|++++.+ ++|+|+++++|++.+++++..||+|+++++
T Consensus 279 ~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~ 347 (348)
T PLN03154 279 SKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRVAK 347 (348)
T ss_pred hccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceecccCHHHHHHHHHHHHcCCCCceEEEEecC
Confidence 8889999886542 24577899999999999887 689999999999999999999999999854
|
|
| >cd05278 FDH_like Formaldehyde dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-41 Score=311.49 Aligned_cols=325 Identities=22% Similarity=0.311 Sum_probs=269.3
Q ss_pred CCCceEEEEeCCCC-CCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCc
Q 018158 21 SGKITPYIFKRREN-GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLA 99 (360)
Q Consensus 21 ~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 99 (360)
++.+.+.+.|.|.| .++||+||+.++++|++|++.+.|.++..++|.++|+|++|+|+++|++++.|++||+|++. ..
T Consensus 9 ~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-~~ 87 (347)
T cd05278 9 PGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPGDRVSVP-CI 87 (347)
T ss_pred CCceEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCCCEEEec-CC
Confidence 45689999999999 99999999999999999999998887656678899999999999999999999999999875 55
Q ss_pred cCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecc--eeEECCCCCCccccccccchhhhhhchhhcc
Q 018158 100 AACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYR--FVVHVPENIAMDAAAPLLCAGITVFCPMKDN 177 (360)
Q Consensus 100 ~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~ 177 (360)
..|+.|.+|..|++++|.+..++..+ +...+|+|++|+.++.+ .++++|+++++++++.+++.+.|||+++ ..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~ 162 (347)
T cd05278 88 TFCGRCRFCRRGYHAHCENGLWGWKL----GNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA-EL 162 (347)
T ss_pred CCCCCChhHhCcCcccCcCCCccccc----ccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhheeehh-hh
Confidence 68999999999999999885443321 12356999999999987 8999999999999999999999999998 44
Q ss_pred CCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---Hhc--CCCcCE
Q 018158 178 NLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQM---QAG--KRTLDF 251 (360)
Q Consensus 178 ~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~--~~~~d~ 251 (360)
.++ +++++|+|.|+|.+|++++|+|+.+|+ +|+++++++++.+.+++ +|+++++++++.+.. ... ++++|+
T Consensus 163 ~~~--~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~i~~~~~~~~~d~ 239 (347)
T cd05278 163 AGI--KPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKE-AGATDIINPKNGDIVEQILELTGGRGVDC 239 (347)
T ss_pred cCC--CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH-hCCcEEEcCCcchHHHHHHHHcCCCCCcE
Confidence 454 499999998779999999999999997 89899888888888887 999999887765322 222 467999
Q ss_pred EEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCccc-ChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccc---eE
Q 018158 252 ILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFEL-PSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCN---IE 327 (360)
Q Consensus 252 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~---i~ 327 (360)
+||++|....+..++++++++|+++.+|........ .....+.+++++.++.....+.++++++++.++.+++. +.
T Consensus 240 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 319 (347)
T cd05278 240 VIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKIDPSKLITH 319 (347)
T ss_pred EEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHcCCCChhHcEEE
Confidence 999998755689999999999999999865433211 11223456777777655556778999999999998763 37
Q ss_pred EECCccHHHHHHHHHcCCC-ceeEEEec
Q 018158 328 VIKPDQINEALDRLARNDV-RYRFVIDI 354 (360)
Q Consensus 328 ~~~~~~~~~a~~~~~~~~~-~gkvvi~~ 354 (360)
.|+++++++|++.+.+++. .+|+++++
T Consensus 320 ~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 320 RFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred EecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 8999999999999988877 68998763
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall |
| >cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-41 Score=309.81 Aligned_cols=333 Identities=30% Similarity=0.535 Sum_probs=284.1
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC-CCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|+|+++...+ +..+++++.+.|.+.++|++||+.++++|++|..++.|.++. ...+.++|||++|+|+++|++++.|+
T Consensus 1 m~a~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~ 79 (341)
T cd08297 1 MKAAVVEEFG-EKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLK 79 (341)
T ss_pred CceEEeeccC-CCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCC
Confidence 5666665444 468999999999999999999999999999999998887642 33466789999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++.+....|+.|.+|..++.++|....+. +....|++++|+.++.+.++++|+++++++++.++..+.
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ 152 (341)
T cd08297 80 VGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS-------GYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGV 152 (341)
T ss_pred CCCEEEEecCCCCCCCCccccCCCcccCCCcccc-------ccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchH
Confidence 9999998877788999999999999999774221 223468999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---HHh
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ---MQA 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~ 244 (360)
|||+++... . ++++++++|+|+ +.+|++++++|+.+|++|+++++++++.+.+++ +|++.++++.+.+. ...
T Consensus 153 ta~~~~~~~-~--~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~ 228 (341)
T cd08297 153 TVYKALKKA-G--LKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKE-LGADAFVDFKKSDDVEAVKE 228 (341)
T ss_pred HHHHHHHhc-C--CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-cCCcEEEcCCCccHHHHHHH
Confidence 999998775 3 459999999999 779999999999999999999999999998877 99998888776422 222
Q ss_pred c--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-cccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCC
Q 018158 245 G--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-FELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYN 321 (360)
Q Consensus 245 ~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~ 321 (360)
. ++++|+++|+.+....+..++++++++|+++.+|..... .++....+..++.++.+......++++.+++++.++.
T Consensus 229 ~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (341)
T cd08297 229 LTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGK 308 (341)
T ss_pred HhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCC
Confidence 2 568999999887766789999999999999999876532 2455556668889998877766788999999999999
Q ss_pred CccceEEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 322 ITCNIEVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 322 l~~~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+++.++.|++++++++++.+.++...||+++++
T Consensus 309 l~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 309 VKPHIQVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred CcceeEEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 987678899999999999999998889999875
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >TIGR01751 crot-CoA-red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=318.61 Aligned_cols=343 Identities=17% Similarity=0.263 Sum_probs=283.0
Q ss_pred CCCCcccceeEEec--cC-CCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC----------CCCCC-Ccc
Q 018158 4 TTPNHTQSVVGWAA--HD-PSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG----------ITMYP-VVP 69 (360)
Q Consensus 4 ~~~~~~~~~~~~~~--~~-~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~----------~~~~p-~~~ 69 (360)
-+|++ |+|.++.. ++ +++.+.+.+++.|.|.++||+||++++++|++|++...+... ....| .++
T Consensus 3 ~~~~~-~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 81 (398)
T TIGR01751 3 VVPET-MYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHII 81 (398)
T ss_pred ccchh-hhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceec
Confidence 35767 78888754 43 457899999999999999999999999999999887655321 11223 379
Q ss_pred ccccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeE
Q 018158 70 GHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVV 149 (360)
Q Consensus 70 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~ 149 (360)
|||++|+|+++|++++.|++||+|++.+ ...|++|.+|..|..++|....+ .|.. ...|+|++|+.++++.++
T Consensus 82 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~g~~----~~~g~~ae~~~v~~~~~~ 154 (398)
T TIGR01751 82 GSDASGVVWRVGPGVTRWKVGDEVVASC-LQVDLTAPDGRVGDPMLSSEQRI--WGYE----TNFGSFAEFALVKDYQLM 154 (398)
T ss_pred ccceEEEEEEeCCCCCCCCCCCEEEEcc-ccccCCchhhccCcccccccccc--cccc----CCCccceEEEEechHHeE
Confidence 9999999999999999999999998764 45789999999999999976421 1111 246899999999999999
Q ss_pred ECCCCCCccccccccchhhhhhchhhc--cCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHH
Q 018158 150 HVPENIAMDAAAPLLCAGITVFCPMKD--NNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKE 226 (360)
Q Consensus 150 ~iP~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~ 226 (360)
++|+++++++++.+.+.+.+||+++.. ... +.++++++|+|+ |++|++++|+|+.+|++++++++++++++.+++
T Consensus 155 ~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~--~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~ 232 (398)
T TIGR01751 155 PKPKHLTWEEAACPGLTGATAYRQLVGWNPAT--VKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRE 232 (398)
T ss_pred ECCCCCCHHHHhhccchHHHHHHHHhhhhccC--CCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH
Confidence 999999999999999999999999865 233 449999999999 999999999999999999988889999999988
Q ss_pred HcCCCeEeeCccHH----------------------H---HHhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeC
Q 018158 227 LLGADEFILSTNAM----------------------Q---MQAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 227 ~~g~~~~v~~~~~~----------------------~---~~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 279 (360)
+|++.++|+++.+ . .... ++++|++|||+|.. .+..++++++++|+++.+|
T Consensus 233 -~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g 310 (398)
T TIGR01751 233 -LGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRA-TFPTSVFVCRRGGMVVICG 310 (398)
T ss_pred -cCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHH-HHHHHHHhhccCCEEEEEc
Confidence 9999999865421 0 1111 46799999999874 5789999999999999999
Q ss_pred CCCC-CcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEecCCC
Q 018158 280 APEA-PFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDIAGG 357 (360)
Q Consensus 280 ~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~ 357 (360)
.... ...++...+..++.++.++.....++++.+++++.++.+.+.+ +++++++++++++.+.+++..||+|+++..+
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~~ 390 (398)
T TIGR01751 311 GTTGYNHDYDNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVLVLAP 390 (398)
T ss_pred cccCCCCCcCHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEEeCCC
Confidence 7653 2445556666778888888777777788999999999998765 8999999999999999999999999998765
Q ss_pred c
Q 018158 358 A 358 (360)
Q Consensus 358 ~ 358 (360)
.
T Consensus 391 ~ 391 (398)
T TIGR01751 391 R 391 (398)
T ss_pred C
Confidence 3
|
The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. |
| >cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-41 Score=310.29 Aligned_cols=331 Identities=21% Similarity=0.333 Sum_probs=279.0
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|||.++..++ ..+++++.+.|.+.+++|+||+.++++|++|+....|.++...+|.++|+|++|+|+++|+++..|++
T Consensus 1 m~a~~~~~~~--~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~ 78 (345)
T cd08260 1 MRAAVYEEFG--EPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRV 78 (345)
T ss_pred CeeEEEecCC--CCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCC
Confidence 4555554333 45899999999999999999999999999999999887655566889999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecc--eeEECCCCCCccccccccchh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYR--FVVHVPENIAMDAAAPLLCAG 167 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~aa~l~~~~ 167 (360)
||+|++ ++...|+.|.+|..|..++|....+ . +....|+|++|+.++.. .++++|+++++++++.++..+
T Consensus 79 Gd~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~ 150 (345)
T cd08260 79 GDRVTV-PFVLGCGTCPYCRAGDSNVCEHQVQ--P-----GFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRF 150 (345)
T ss_pred CCEEEE-CCCCCCCCCccccCcCcccCCCCcc--c-----ccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccch
Confidence 999988 5556899999999999999997432 1 11346999999999974 899999999999999999999
Q ss_pred hhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCcc-HHHH---H
Q 018158 168 ITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN-AMQM---Q 243 (360)
Q Consensus 168 ~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~-~~~~---~ 243 (360)
.+||+++.....+. ++++++|+|+|++|++++|+|+..|++|+++++++++.+.+++ +|+++++++++ .+.. .
T Consensus 151 ~ta~~~l~~~~~~~--~~~~vlV~g~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~ 227 (345)
T cd08260 151 ATAFRALVHQARVK--PGEWVAVHGCGGVGLSAVMIASALGARVIAVDIDDDKLELARE-LGAVATVNASEVEDVAAAVR 227 (345)
T ss_pred HHHHHHHHHccCCC--CCCEEEEECCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH-hCCCEEEccccchhHHHHHH
Confidence 99999987666554 9999999999999999999999999999999999999999987 99999998776 3222 1
Q ss_pred hc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC---cccChhhHhccCcEEEEeecCCHHHHHHHHHHHhc
Q 018158 244 AG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP---FELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGK 319 (360)
Q Consensus 244 ~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~ 319 (360)
.. ..++|++||++|....+...+++++++|+++.+|..... ..++...+..+++++.++.....+.++.+++++++
T Consensus 228 ~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 307 (345)
T cd08260 228 DLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIAS 307 (345)
T ss_pred HHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHc
Confidence 12 237999999998755678999999999999999976432 34455556678889998877777889999999999
Q ss_pred CCCccc--e-EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 320 YNITCN--I-EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 320 ~~l~~~--i-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
+.+.+. + +.++++++++|++.+++++..||+|++
T Consensus 308 ~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 308 GKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred CCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 988652 3 899999999999999999988998864
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty |
| >PRK13771 putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-41 Score=310.38 Aligned_cols=328 Identities=24% Similarity=0.378 Sum_probs=274.9
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|+++.+ ..+...++++++|.|.+.++|++||++++++|++|++...|.++...+|.++|||++|+|+++|++++.+++
T Consensus 1 m~a~~~--~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 78 (334)
T PRK13771 1 MKAVIL--PGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKP 78 (334)
T ss_pred CeeEEE--cCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCC
Confidence 344443 344346999999999999999999999999999999988887655566788999999999999999989999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
||+|++.+. ..|+.|.+|..|.++.|.+..+ .+....|+|++|+.++.+.++++|+++++.+++.+++.+.+
T Consensus 79 G~~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~ 150 (334)
T PRK13771 79 GDRVASLLY-APDGTCEYCRSGEEAYCKNRLG-------YGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGM 150 (334)
T ss_pred CCEEEECCC-CCCcCChhhcCCCcccCccccc-------cccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHH
Confidence 999988655 5899999999999999987432 12245799999999999999999999999999999999999
Q ss_pred hhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH-HHHHhcCC
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA-MQMQAGKR 247 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~-~~~~~~~~ 247 (360)
||+++... .. .++++++|+|+ |.+|++++|+|+.+|++|+++++++++++.+++ + ++++++..+. ...... .
T Consensus 151 a~~~~~~~-~~--~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~v~~~-~ 224 (334)
T PRK13771 151 VYRGLRRA-GV--KKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSK-Y-ADYVIVGSKFSEEVKKI-G 224 (334)
T ss_pred HHHHHHhc-CC--CCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-H-HHHhcCchhHHHHHHhc-C
Confidence 99999877 54 49999999999 999999999999999999999999999998877 7 7666665522 122223 3
Q ss_pred CcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCc--ccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccc
Q 018158 248 TLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPF--ELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCN 325 (360)
Q Consensus 248 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~ 325 (360)
++|+++||+|+. ....++++++++|+++.+|...... .......+.+++++.+.....+++++.+++++.++.+++.
T Consensus 225 ~~d~~ld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 303 (334)
T PRK13771 225 GADIVIETVGTP-TLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKIKPV 303 (334)
T ss_pred CCcEEEEcCChH-HHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCCCcce
Confidence 799999999986 5789999999999999999764322 2334444567888888766677889999999999999865
Q ss_pred e-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 326 I-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 326 i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+ +.|+++++++|++.++++...||+++++
T Consensus 304 ~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 304 IGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred EeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 5 8999999999999999988889999864
|
|
| >cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-41 Score=313.11 Aligned_cols=328 Identities=22% Similarity=0.369 Sum_probs=270.2
Q ss_pred cCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEecc
Q 018158 18 HDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97 (360)
Q Consensus 18 ~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 97 (360)
...++++++++++.|++.+++|+||+.++++|++|++.+.|.+ ...+|.++|||++|+|+++|++++.+++||+|++.+
T Consensus 7 ~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~-~~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~Vv~~~ 85 (365)
T cd05279 7 WEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKL-PTPLPVILGHEGAGIVESIGPGVTTLKPGDKVIPLF 85 (365)
T ss_pred ecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCC-CCCCCcccccceeEEEEEeCCCcccCCCCCEEEEcC
Confidence 4455679999999999999999999999999999999998876 345678999999999999999999999999998865
Q ss_pred CccCCCCChhhhCCCCCCccccccc-ccccccCC-------------CccccceeeEEEeecceeEECCCCCCccccccc
Q 018158 98 LAAACMECEFCKDSQENYCDKIQFT-YNGIFWDG-------------SITYGGYSEMLVADYRFVVHVPENIAMDAAAPL 163 (360)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~c~~~~~~-~~g~~~~~-------------~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l 163 (360)
. ..|+.|.+|..+.+++|+...+. ..|....| ....|+|++|+.++++.++++|+++++++++.+
T Consensus 86 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~ 164 (365)
T cd05279 86 G-PQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLI 164 (365)
T ss_pred C-CCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHHHhhHh
Confidence 4 58999999999999999885433 23322111 113479999999999999999999999999999
Q ss_pred cchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccH--H
Q 018158 164 LCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNA--M 240 (360)
Q Consensus 164 ~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--~ 240 (360)
++++.+||+++.....+. +|++++|+|+|++|++++|+|+.+|++ |+++++++++++.+++ +|++++++..+. +
T Consensus 165 ~~~~~ta~~al~~~~~~~--~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~v~~~~~~~~ 241 (365)
T cd05279 165 GCGFSTGYGAAVNTAKVT--PGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQ-LGATECINPRDQDKP 241 (365)
T ss_pred ccchhHHHHHHHhccCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-hCCCeecccccccch
Confidence 999999999887666655 999999998899999999999999996 7788889999999977 999988876553 2
Q ss_pred H---HHh-cCCCcCEEEEcCCCcccHHHHHHHhc-cCCEEEEeCCCC--CCcccChhhHhccCcEEEEeec---CCHHHH
Q 018158 241 Q---MQA-GKRTLDFILDTVSAKHSLGPILELLK-VNGTLSVVGAPE--APFELPSFPLIFGKRSVKGSMT---GGMRET 310 (360)
Q Consensus 241 ~---~~~-~~~~~d~vid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~---~~~~~~ 310 (360)
. ... .++++|++||++|....+..++++++ ++|+++.+|... ....++...+ .++.++.++.. ...+.+
T Consensus 242 ~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~~~~~~~ 320 (365)
T cd05279 242 IVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGGWKSKDSV 320 (365)
T ss_pred HHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccCCchHhHH
Confidence 1 111 25689999999987667889999999 999999998754 3455556566 67778877643 345678
Q ss_pred HHHHHHHhcCCCcc---ceEEECCccHHHHHHHHHcCCCceeEEE
Q 018158 311 QEMMNVCGKYNITC---NIEVIKPDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 311 ~~~~~~l~~~~l~~---~i~~~~~~~~~~a~~~~~~~~~~gkvvi 352 (360)
..+++++.++.+++ .+++|+++++++|++.+.+++.. |+++
T Consensus 321 ~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~ 364 (365)
T cd05279 321 PKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL 364 (365)
T ss_pred HHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence 89999999998864 24899999999999999887654 7665
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall |
| >cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=305.49 Aligned_cols=323 Identities=41% Similarity=0.732 Sum_probs=276.3
Q ss_pred CCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccC
Q 018158 19 DPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCL 98 (360)
Q Consensus 19 ~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 98 (360)
+..+.+++++.+.|.+.+++|+|++.++++|++|++.+.|.+....+|.++|||++|+|+++|+++++|++||+|++.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~ 86 (330)
T cd08245 7 AAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVGWL 86 (330)
T ss_pred cCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCEEEEccc
Confidence 44368999999999999999999999999999999999887644456788999999999999999999999999988777
Q ss_pred ccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccC
Q 018158 99 AAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNN 178 (360)
Q Consensus 99 ~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~ 178 (360)
..+|+.|.+|.++.++.|.+..+... ...|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~~- 158 (330)
T cd08245 87 VGSCGRCEYCRRGLENLCQKAVNTGY-------TTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRDA- 158 (330)
T ss_pred cCCCCCChhhhCcCcccCcCccccCc-------ccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHhh-
Confidence 67899999999999999998544221 2468999999999999999999999999999999999999998764
Q ss_pred CCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 179 LIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 179 ~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
. ++++++++|+|+|.+|++++++|+.+|++|+++++++++.+.+++ +|++.+++...........+++|+++|+++.
T Consensus 159 ~--~~~~~~vlI~g~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~d~vi~~~~~ 235 (330)
T cd08245 159 G--PRPGERVAVLGIGGLGHLAVQYARAMGFETVAITRSPDKRELARK-LGADEVVDSGAELDEQAAAGGADVILVTVVS 235 (330)
T ss_pred C--CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hCCcEEeccCCcchHHhccCCCCEEEECCCc
Confidence 3 459999999988889999999999999999999999999999977 9988888765543322233579999999887
Q ss_pred cccHHHHHHHhccCCEEEEeCCCCCC-cccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccceEEECCccHHHH
Q 018158 259 KHSLGPILELLKVNGTLSVVGAPEAP-FELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIEVIKPDQINEA 337 (360)
Q Consensus 259 ~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~a 337 (360)
......++++++++|+++.+|..... .......++.++.++.++.......++.+++++.++.+.+.++.|++++++++
T Consensus 236 ~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~a 315 (330)
T cd08245 236 GAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVKPMIETFPLDQANEA 315 (330)
T ss_pred HHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCcceEEEEcHHHHHHH
Confidence 66788999999999999999865432 22224456778889988888777889999999999999876689999999999
Q ss_pred HHHHHcCCCceeEEE
Q 018158 338 LDRLARNDVRYRFVI 352 (360)
Q Consensus 338 ~~~~~~~~~~gkvvi 352 (360)
++.+.+++..||+|+
T Consensus 316 ~~~~~~~~~~~~~v~ 330 (330)
T cd08245 316 YERMEKGDVRFRFVL 330 (330)
T ss_pred HHHHHcCCCCcceeC
Confidence 999999998888874
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an |
| >cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=303.82 Aligned_cols=314 Identities=30% Similarity=0.525 Sum_probs=269.1
Q ss_pred CCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCccC
Q 018158 22 GKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAA 101 (360)
Q Consensus 22 ~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 101 (360)
+.+.+++.+.|.+.++||+||+.++++|++|++.+.|.++....|.++|||++|+|+++|+++.+|++||+|++.+....
T Consensus 15 ~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 94 (329)
T cd08298 15 NPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGST 94 (329)
T ss_pred CCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCCcCCCEEEEeccCCC
Confidence 47888888888899999999999999999999999887654556789999999999999999999999999988777778
Q ss_pred CCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCCC
Q 018158 102 CMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLID 181 (360)
Q Consensus 102 ~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~ 181 (360)
|+.|.+|..+..++|....+. | ...+|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++ ...+++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~--~-----~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~ 166 (329)
T cd08298 95 CGECRYCRSGRENLCDNARFT--G-----YTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLK 166 (329)
T ss_pred CCCChhHhCcChhhCCCcccc--c-----cccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH-HhhCCC
Confidence 999999999999999875432 2 23468999999999999999999999999999999999999998 555555
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
++++++|+|+|++|++++++++..|++|+++++++++++.+++ +|++.+++.... .++++|+++++.+....
T Consensus 167 --~~~~vlV~g~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~-----~~~~vD~vi~~~~~~~~ 238 (329)
T cd08298 167 --PGQRLGLYGFGASAHLALQIARYQGAEVFAFTRSGEHQELARE-LGADWAGDSDDL-----PPEPLDAAIIFAPVGAL 238 (329)
T ss_pred --CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHH-hCCcEEeccCcc-----CCCcccEEEEcCCcHHH
Confidence 9999999988999999999999999999999999999999977 999887776543 24579999998776667
Q ss_pred HHHHHHHhccCCEEEEeCCCCCCc-ccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccceEEECCccHHHHHHH
Q 018158 262 LGPILELLKVNGTLSVVGAPEAPF-ELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIEVIKPDQINEALDR 340 (360)
Q Consensus 262 ~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~a~~~ 340 (360)
+..++++++++|+++.+|...... .++.. .+.++..+.++.....+.++.+++++.++.+++.++.|+++++++|++.
T Consensus 239 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~a~~~ 317 (329)
T cd08298 239 VPAALRAVKKGGRVVLAGIHMSDIPAFDYE-LLWGEKTIRSVANLTRQDGEEFLKLAAEIPIKPEVETYPLEEANEALQD 317 (329)
T ss_pred HHHHHHHhhcCCEEEEEcCCCCCCCccchh-hhhCceEEEEecCCCHHHHHHHHHHHHcCCCCceEEEEeHHHHHHHHHH
Confidence 899999999999999988543222 12222 2456777877777777888999999999998876789999999999999
Q ss_pred HHcCCCceeEEE
Q 018158 341 LARNDVRYRFVI 352 (360)
Q Consensus 341 ~~~~~~~gkvvi 352 (360)
+++++..||+++
T Consensus 318 ~~~~~~~~~~v~ 329 (329)
T cd08298 318 LKEGRIRGAAVL 329 (329)
T ss_pred HHcCCCcceeeC
Confidence 999998899874
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-40 Score=306.31 Aligned_cols=335 Identities=22% Similarity=0.377 Sum_probs=273.2
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|+|+.+... .+.+++++++.|+++++||+||+.++++|+.|+.++.|.++ ..+|.++|+|++|+|+++|++++.|++
T Consensus 1 m~a~~~~~~--~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~ 77 (363)
T cd08279 1 MRAAVLHEV--GKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKP 77 (363)
T ss_pred CeEEEEecC--CCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCC
Confidence 455555433 35789999999999999999999999999999999888763 456778999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCccccccccc-------------ccccCCCccccceeeEEEeecceeEECCCCCC
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYN-------------GIFWDGSITYGGYSEMLVADYRFVVHVPENIA 156 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~-------------g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~ 156 (360)
||+|++.+ ..+|++|.+|.+++.+.|.+..++-. |.........|+|++|+.++.+.++++|++++
T Consensus 78 Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~ 156 (363)
T cd08279 78 GDHVVLSW-IPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIP 156 (363)
T ss_pred CCEEEECC-CCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCC
Confidence 99998764 45999999999999999987533211 11111123468999999999999999999999
Q ss_pred ccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEee
Q 018158 157 MDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFIL 235 (360)
Q Consensus 157 ~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~ 235 (360)
+++++.+++.+.+||.++.....+. ++++++|+|+|.+|++++++|+.+|++ |+++++++++.+.+++ +|++++++
T Consensus 157 ~~~aa~~~~~~~ta~~~~~~~~~~~--~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~-~g~~~vv~ 233 (363)
T cd08279 157 LDRAALLGCGVTTGVGAVVNTARVR--PGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARR-FGATHTVN 233 (363)
T ss_pred hHHeehhcchhHHHHHHHHhccCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHH-hCCeEEeC
Confidence 9999999999999999987766655 999999997799999999999999996 9999999999988877 99988887
Q ss_pred CccHHH---HHhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC--CCcccChhhHhccCcEEEEeec---C
Q 018158 236 STNAMQ---MQAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE--APFELPSFPLIFGKRSVKGSMT---G 305 (360)
Q Consensus 236 ~~~~~~---~~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~---~ 305 (360)
.+.... .... ++++|+++|+++....+..++++++++|+++.+|... ....+....+..++..+.++.. .
T Consensus 234 ~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (363)
T cd08279 234 ASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSAN 313 (363)
T ss_pred CCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcC
Confidence 765322 2222 5679999999997667899999999999999998654 2344555566666777666643 2
Q ss_pred CHHHHHHHHHHHhcCCCcc--ce-EEECCccHHHHHHHHHcCCCceeEE
Q 018158 306 GMRETQEMMNVCGKYNITC--NI-EVIKPDQINEALDRLARNDVRYRFV 351 (360)
Q Consensus 306 ~~~~~~~~~~~l~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~gkvv 351 (360)
..+.++++++++.++.+++ .+ ++|+++++++|++.+.+++..+.++
T Consensus 314 ~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 314 PRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred cHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 3567889999999999875 24 8899999999999999888765554
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me |
| >cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=306.76 Aligned_cols=328 Identities=19% Similarity=0.274 Sum_probs=264.1
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC---------CCCCCCccccccceEEEEe
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG---------ITMYPVVPGHEITGIITKV 80 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---------~~~~p~~~G~e~~G~V~~v 80 (360)
||++++ + .++.+++++.+.|++++++|+||+.++++|++|++...|... ..++|.++|||++|+|+++
T Consensus 1 mka~~~--~-~~~~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~v 77 (350)
T cd08256 1 MRAVVC--H-GPQDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVEL 77 (350)
T ss_pred CeeEEE--e-cCCceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEe
Confidence 355554 3 346799999999999999999999999999999998887531 1145778999999999999
Q ss_pred cCCCC--CCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecc-eeEECCCCCCc
Q 018158 81 GSNVK--NFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYR-FVVHVPENIAM 157 (360)
Q Consensus 81 G~~v~--~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~-~~~~iP~~~~~ 157 (360)
|+.++ .|++||+|++. ....|+.|..|..|..++|... .+.|.. ....|+|++|+.++++ .++++|+++++
T Consensus 78 G~~v~~~~~~~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~g~~---~~~~g~~~~~~~~~~~~~~~~lP~~~~~ 151 (350)
T cd08256 78 GEGAEERGVKVGDRVISE-QIVPCWNCRFCNRGQYWMCQKH--DLYGFQ---NNVNGGMAEYMRFPKEAIVHKVPDDIPP 151 (350)
T ss_pred CCCcccCCCCCCCEEEEC-CcCCCCCChHHhCcCcccCcCc--cceeec---cCCCCcceeeEEcccccceEECCCCCCH
Confidence 99999 89999999875 4568999999999999999653 222321 0246999999999988 57899999999
Q ss_pred cccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeC
Q 018158 158 DAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILS 236 (360)
Q Consensus 158 ~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~ 236 (360)
++++.+ ..+.++|+++. ..++ .++++|+|.|+|.+|++++|+|+.+|++ ++++++++++.+.+.+ +|+++++++
T Consensus 152 ~~aa~~-~~~~ta~~a~~-~~~~--~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~g~~~v~~~ 226 (350)
T cd08256 152 EDAILI-EPLACALHAVD-RANI--KFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARK-FGADVVLNP 226 (350)
T ss_pred HHHhhh-hHHHHHHHHHH-hcCC--CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHH-cCCcEEecC
Confidence 999888 88899999984 4444 4999999977799999999999999985 7788888888887777 999888877
Q ss_pred ccHHH---HHhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhH-hccCcEEEEeecCCHHHH
Q 018158 237 TNAMQ---MQAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPL-IFGKRSVKGSMTGGMRET 310 (360)
Q Consensus 237 ~~~~~---~~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~ 310 (360)
.+.+. .... +.++|++||++|....+..++++++++|+++.+|.......+....+ ..+++++.++.... ..+
T Consensus 227 ~~~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~ 305 (350)
T cd08256 227 PEVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGP-YCY 305 (350)
T ss_pred CCcCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCc-hhH
Confidence 65322 2222 45799999999975567889999999999999987654444444333 35677777766543 468
Q ss_pred HHHHHHHhcCCCcc---ceEEECCccHHHHHHHHHcCCCceeEEE
Q 018158 311 QEMMNVCGKYNITC---NIEVIKPDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 311 ~~~~~~l~~~~l~~---~i~~~~~~~~~~a~~~~~~~~~~gkvvi 352 (360)
.++++++.++.+++ ..+.|+++++++|++.+++++..+|+++
T Consensus 306 ~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 306 PIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred HHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 88999999999976 3489999999999999999888888874
|
This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, |
| >cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-40 Score=304.56 Aligned_cols=323 Identities=23% Similarity=0.346 Sum_probs=268.0
Q ss_pred CCCceEEEEeCCCC-CCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCc
Q 018158 21 SGKITPYIFKRREN-GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLA 99 (360)
Q Consensus 21 ~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 99 (360)
++.+++++.+.|+| .++||+||++++++|++|+..+.|.+....+|.++|||++|+|+++|++++.+++||+|++.+..
T Consensus 9 ~~~~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~ 88 (345)
T cd08286 9 PGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCIS 88 (345)
T ss_pred CCceeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCCCEEEECCcC
Confidence 45699999999986 89999999999999999999999877555567899999999999999999999999999876554
Q ss_pred cCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecc--eeEECCCCCCccccccccchhhhhhchhhcc
Q 018158 100 AACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYR--FVVHVPENIAMDAAAPLLCAGITVFCPMKDN 177 (360)
Q Consensus 100 ~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~ 177 (360)
.|+.|++|..++++.|....+ + .+....|++++|+.++.+ .++++|++++..+++.+++.+.+||.++...
T Consensus 89 -~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~ 161 (345)
T cd08286 89 -SCGTCGYCRKGLYSHCESGGW-I-----LGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLN 161 (345)
T ss_pred -CCCCChHHHCcCcccCCCccc-c-----cccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHHHHhh
Confidence 799999999999999986422 1 123456999999999987 8999999999999999999999999876555
Q ss_pred CCCCCCCCcEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---Hh--cCCCcCE
Q 018158 178 NLIDSPAKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNAMQM---QA--GKRTLDF 251 (360)
Q Consensus 178 ~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~--~~~~~d~ 251 (360)
..++ ++++++|.|+|.+|++++|+|+.+| .+|+++++++++...+++ +|+++++++.+.+.. .. .++++|+
T Consensus 162 ~~~~--~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~v~~~~~~~~~~i~~~~~~~~~d~ 238 (345)
T cd08286 162 GKVK--PGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKK-LGATHTVNSAKGDAIEQVLELTDGRGVDV 238 (345)
T ss_pred cCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-hCCCceeccccccHHHHHHHHhCCCCCCE
Confidence 5544 9999999988999999999999999 689999888888888887 999998887654221 11 2467999
Q ss_pred EEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc---ceEE
Q 018158 252 ILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC---NIEV 328 (360)
Q Consensus 252 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~---~i~~ 328 (360)
+||++|....+..+++.++++|+++.+|.......++...++.+++++.+.... .+.++.++++++++.+++ .+++
T Consensus 239 vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~ 317 (345)
T cd08286 239 VIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVD-TNTTPMLLKLVSSGKLDPSKLVTHR 317 (345)
T ss_pred EEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCc-hhhHHHHHHHHHcCCCChHHcEEeE
Confidence 999998766788999999999999999976544555555667788888875443 256788889999998865 2389
Q ss_pred ECCccHHHHHHHHHcCC--CceeEEEec
Q 018158 329 IKPDQINEALDRLARND--VRYRFVIDI 354 (360)
Q Consensus 329 ~~~~~~~~a~~~~~~~~--~~gkvvi~~ 354 (360)
|+++++++|++.+.... ...|++|++
T Consensus 318 ~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 318 FKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred eeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 99999999999998763 335999864
|
This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers ( |
| >KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-41 Score=281.82 Aligned_cols=309 Identities=22% Similarity=0.288 Sum_probs=260.8
Q ss_pred cceeEEecc-CCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCC
Q 018158 10 QSVVGWAAH-DPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNF 87 (360)
Q Consensus 10 ~~~~~~~~~-~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~ 87 (360)
-++++|..+ .|.+.+++++.++|....++|+||.+|+.|||+|+-.++|.|+ .+.+|.+-|.|++|+|+.+|+++++|
T Consensus 20 ~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~vkgf 99 (354)
T KOG0025|consen 20 SKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSNVKGF 99 (354)
T ss_pred cceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCCcCcc
Confidence 677888887 5666999999999998888899999999999999999999997 45678999999999999999999999
Q ss_pred CCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchh
Q 018158 88 KVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAG 167 (360)
Q Consensus 88 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~ 167 (360)
++||+|+... ...|+|++|.+.+++.++++++.+++++||++..+.
T Consensus 100 k~Gd~VIp~~----------------------------------a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP 145 (354)
T KOG0025|consen 100 KPGDWVIPLS----------------------------------ANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNP 145 (354)
T ss_pred CCCCeEeecC----------------------------------CCCccceeeEeecccceEEcCCcCChhhhheeccCc
Confidence 9999998532 456999999999999999999999999999999999
Q ss_pred hhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeEeeCccHHHH-
Q 018158 168 ITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEFILSTNAMQM- 242 (360)
Q Consensus 168 ~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~v~~~~~~~~- 242 (360)
.|||.+|.+.-.+. +||+|+..|+ +++|++.+|+||.+|++-+-+.|+....+.+++. +||++++...+....
T Consensus 146 ~TAyrmL~dfv~L~--~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~ 223 (354)
T KOG0025|consen 146 CTAYRMLKDFVQLN--KGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRK 223 (354)
T ss_pred hHHHHHHHHHHhcC--CCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchh
Confidence 99999998877755 9999999999 9999999999999999988888887665555443 899999865443211
Q ss_pred ----HhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC-CCcccChhhHhccCcEEEEeecCCH----------
Q 018158 243 ----QAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE-APFELPSFPLIFGKRSVKGSMTGGM---------- 307 (360)
Q Consensus 243 ----~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~~---------- 307 (360)
.....++.+.|||+|+..+ ..+.+.|.+||.++.+|.++ .+..++...++++.+.+.|++...+
T Consensus 224 ~~k~~~~~~~prLalNcVGGksa-~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~ 302 (354)
T KOG0025|consen 224 MKKFKGDNPRPRLALNCVGGKSA-TEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEER 302 (354)
T ss_pred hhhhhccCCCceEEEeccCchhH-HHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHH
Confidence 1125679999999999865 67779999999999999877 5788899999999999999987432
Q ss_pred -HHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHc-CCCceeEEEecC
Q 018158 308 -RETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLAR-NDVRYRFVIDIA 355 (360)
Q Consensus 308 -~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~-~~~~gkvvi~~~ 355 (360)
+.+.++.++...|+++.+. +..+|++...|++...+ ....||-+|.+.
T Consensus 303 ~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~e 353 (354)
T KOG0025|consen 303 KEMIDELCDLYRRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVLE 353 (354)
T ss_pred HHHHHHHHHHHHcCeeccccceeeechhhhHHHHHHHHHhccCCceEEEec
Confidence 3356777899999998876 88899999998875544 344467777654
|
|
| >cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-40 Score=301.84 Aligned_cols=333 Identities=28% Similarity=0.432 Sum_probs=282.1
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|+++++...+.+. +.+.+.+.|.+++++|+|++.++++|+.|+..+.|.++ ....|.++|+|++|+|+.+|++++.|+
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~ 79 (338)
T cd08254 1 MKAWRFHKGSKGL-LVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFK 79 (338)
T ss_pred CeeEEEecCCCCc-eEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCC
Confidence 3445554433333 78888899999999999999999999999999888764 344577899999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++.+. .+|+.|..|..++.+.|....+ . +....|+|++|+.++.+.++++|+++++++++.++..+.
T Consensus 80 ~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ 151 (338)
T cd08254 80 VGDRVAVPAV-IPCGACALCRRGRGNLCLNQGM--P-----GLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVL 151 (338)
T ss_pred CCCEEEECCC-CCCCCChhhhCcCcccCCCCCc--c-----ccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHH
Confidence 9999987664 5899999999999999965322 1 224569999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---H-Hh
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ---M-QA 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~-~~ 244 (360)
+||+++.....++ +++++||.|+|.+|++++++|+.+|++|+++++++++.+.+++ +|.+++++..+... . ..
T Consensus 152 ta~~~l~~~~~~~--~~~~vli~g~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 228 (338)
T cd08254 152 TPYHAVVRAGEVK--PGETVLVIGLGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKE-LGADEVLNSLDDSPKDKKAAG 228 (338)
T ss_pred HHHHHHHhccCCC--CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-hCCCEEEcCCCcCHHHHHHHh
Confidence 9999998877655 9999999877999999999999999999999999999999977 99888877654322 1 12
Q ss_pred cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc
Q 018158 245 GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC 324 (360)
Q Consensus 245 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~ 324 (360)
.++++|+++||+|....+..++++++++|+++.+|.......+....+..++.++.++.....+.+..++++++++.+.+
T Consensus 229 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~ 308 (338)
T cd08254 229 LGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDP 308 (338)
T ss_pred cCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCcc
Confidence 25679999999987767899999999999999998765555556666778888898887777788999999999999876
Q ss_pred ceEEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 325 NIEVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 325 ~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
.++.+++++++++++.+.+++..||+++++
T Consensus 309 ~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 309 QVETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred cceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 678999999999999999999999999874
|
This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio |
| >cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=304.61 Aligned_cols=328 Identities=21% Similarity=0.236 Sum_probs=264.6
Q ss_pred CCCCCceEEEEeCCCC-CCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEecc
Q 018158 19 DPSGKITPYIFKRREN-GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97 (360)
Q Consensus 19 ~~~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 97 (360)
.+++.++++++|.|.+ +++||+||++++++|++|++.+.|.++ ..+|.++|||++|+|+++|++++.|++||+|++.
T Consensus 7 ~~~~~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~- 84 (375)
T cd08282 7 GGPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVGDRVVVP- 84 (375)
T ss_pred ecCCceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCCCEEEEe-
Confidence 3456899999999996 899999999999999999999988764 4468899999999999999999999999999765
Q ss_pred CccCCCCChhhhCCCCCCcccccccccccc---cCCCccccceeeEEEeecc--eeEECCCCCCcc---ccccccchhhh
Q 018158 98 LAAACMECEFCKDSQENYCDKIQFTYNGIF---WDGSITYGGYSEMLVADYR--FVVHVPENIAMD---AAAPLLCAGIT 169 (360)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~---~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~---~aa~l~~~~~t 169 (360)
...+|+.|..|..+.++.|.+....+.|.. +.....+|+|++|+.++.+ .++++|++++++ +++.++..+.+
T Consensus 85 ~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~~~~~~t 164 (375)
T cd08282 85 FNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPT 164 (375)
T ss_pred CCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhheeeecchHHH
Confidence 556799999999999999987432221111 0111346999999999976 899999999998 56788889999
Q ss_pred hhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---HHh-
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQ---MQA- 244 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~- 244 (360)
||+++ ....+. +|++|+|.|+|++|++++|+|+.+|+ +|+++++++++.+.+++ +|++ .+++.+.+. ...
T Consensus 165 a~~a~-~~~~~~--~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~-~v~~~~~~~~~~i~~~ 239 (375)
T cd08282 165 GWHGL-ELAGVQ--PGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAES-IGAI-PIDFSDGDPVEQILGL 239 (375)
T ss_pred HHHHH-HhcCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-cCCe-EeccCcccHHHHHHHh
Confidence 99998 444444 99999998889999999999999998 79999999999998888 9984 556554322 222
Q ss_pred cCCCcCEEEEcCCCcc-----------cHHHHHHHhccCCEEEEeCCCCC-------------CcccChhhHhccCcEEE
Q 018158 245 GKRTLDFILDTVSAKH-----------SLGPILELLKVNGTLSVVGAPEA-------------PFELPSFPLIFGKRSVK 300 (360)
Q Consensus 245 ~~~~~d~vid~~g~~~-----------~~~~~~~~l~~~G~~v~~g~~~~-------------~~~~~~~~~~~~~~~i~ 300 (360)
..+++|+++||+|... .+..++++++++|+++.+|.... ...++...++.++..+.
T Consensus 240 ~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (375)
T cd08282 240 EPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFG 319 (375)
T ss_pred hCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHHHhcCcEEE
Confidence 1357999999998763 37899999999999998876431 12234455666777777
Q ss_pred EeecCCHHHHHHHHHHHhcCCCcc---ceEEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 301 GSMTGGMRETQEMMNVCGKYNITC---NIEVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 301 ~~~~~~~~~~~~~~~~l~~~~l~~---~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
++.....+.+..+++++.++.+++ .+++|+++++++|++.+.+++ .+|+|+++
T Consensus 320 ~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~~ 375 (375)
T cd08282 320 TGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIKP 375 (375)
T ss_pred EecCCchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence 766656677888999999999986 349999999999999999988 88999863
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo |
| >cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=300.50 Aligned_cols=320 Identities=23% Similarity=0.389 Sum_probs=266.6
Q ss_pred CCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCcc
Q 018158 21 SGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAA 100 (360)
Q Consensus 21 ~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 100 (360)
++.+.+.+++.|++.++||+|||.++++|+.|+....+.++...+|.++|+|++|+|+++|++++.|++||+|+.. ...
T Consensus 9 ~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~-~~~ 87 (337)
T cd08261 9 PGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGDRVVVD-PYI 87 (337)
T ss_pred CCceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCCEEEEC-CCC
Confidence 4689999999999999999999999999999999988876555567889999999999999999999999999875 445
Q ss_pred CCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCC
Q 018158 101 ACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLI 180 (360)
Q Consensus 101 ~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~ 180 (360)
+|+.|..|..+..+.|.+... .+ ....|+|++|+.++++ ++++|+++++++++++ ..+.++++++ ....+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~l 157 (337)
T cd08261 88 SCGECYACRKGRPNCCENLQV--LG-----VHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAGV 157 (337)
T ss_pred CCCCChhhhCcCcccCCCCCe--ee-----ecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcCC
Confidence 899999999999999964321 11 1236899999999999 9999999999998877 5667888887 44454
Q ss_pred CCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---HHhc--CCCcCEEEEc
Q 018158 181 DSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ---MQAG--KRTLDFILDT 255 (360)
Q Consensus 181 ~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~--~~~~d~vid~ 255 (360)
.+++++||+|+|.+|++++|+|+.+|++|+++.+++++.+.+++ +|+++++++.+... +... ++++|+++|+
T Consensus 158 --~~g~~vLI~g~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~-~g~~~v~~~~~~~~~~~l~~~~~~~~vd~vld~ 234 (337)
T cd08261 158 --TAGDTVLVVGAGPIGLGVIQVAKARGARVIVVDIDDERLEFARE-LGADDTINVGDEDVAARLRELTDGEGADVVIDA 234 (337)
T ss_pred --CCCCEEEEECCCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHH-hCCCEEecCcccCHHHHHHHHhCCCCCCEEEEC
Confidence 49999999988999999999999999999999999999998877 99999988776422 2222 4579999999
Q ss_pred CCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc--ce-EEECCc
Q 018158 256 VSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC--NI-EVIKPD 332 (360)
Q Consensus 256 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~--~i-~~~~~~ 332 (360)
+|....+..++++++++|+++.+|.......++...+..+++++.++.....+.++.+++++.++.+++ .+ ..++++
T Consensus 235 ~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~ 314 (337)
T cd08261 235 TGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALITHRFPFE 314 (337)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhhheEEEeeHH
Confidence 987667889999999999999998765444445555566778887775555667889999999999986 44 899999
Q ss_pred cHHHHHHHHHcCC-CceeEEEec
Q 018158 333 QINEALDRLARND-VRYRFVIDI 354 (360)
Q Consensus 333 ~~~~a~~~~~~~~-~~gkvvi~~ 354 (360)
++++|++.+.+++ ..+|+|+++
T Consensus 315 ~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 315 DVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred HHHHHHHHHhcCCCceEEEEEeC
Confidence 9999999999884 678999874
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, |
| >cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=304.42 Aligned_cols=337 Identities=25% Similarity=0.459 Sum_probs=275.4
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCC---
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKN--- 86 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~--- 86 (360)
|++.++... ...+++++.|.|.+.++||+||+.++++|++|+.++.+.++ ..+|.++|||++|+|+.+|+++++
T Consensus 1 ~~a~~~~~~--~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~-~~~p~~~g~e~~G~v~~vG~~~~~~~~ 77 (367)
T cd08263 1 MKAAVLKGP--NPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELP-FPPPFVLGHEISGEVVEVGPNVENPYG 77 (367)
T ss_pred CeeEEEecC--CCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCC-CCCCcccccccceEEEEeCCCCCCCCc
Confidence 355555433 35688999999999999999999999999999999888763 366789999999999999999988
Q ss_pred CCCCCEEEeccCccCCCCChhhhCCCCCCccccccc-c-cccccCC-------------CccccceeeEEEeecceeEEC
Q 018158 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFT-Y-NGIFWDG-------------SITYGGYSEMLVADYRFVVHV 151 (360)
Q Consensus 87 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~-~g~~~~~-------------~~~~g~~~~~~~v~~~~~~~i 151 (360)
|++||+|++.+ ..+|+.|.+|..+..++|.+..++ . .|....| ....|++++|+.++.+.++++
T Consensus 78 ~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 156 (367)
T cd08263 78 LSVGDRVVGSF-IMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPL 156 (367)
T ss_pred CCCCCEEEEcC-CCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEEC
Confidence 99999998744 448999999999999999975421 1 1111000 123689999999999999999
Q ss_pred CCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCC
Q 018158 152 PENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGA 230 (360)
Q Consensus 152 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~ 230 (360)
|+++++.+++.+++.+.|||+++.....+. ++++++|+|+|++|++++++|+.+|++ |++++.++++.+.+++ +|+
T Consensus 157 P~~is~~~aa~l~~~~~tA~~~l~~~~~~~--~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~-~g~ 233 (367)
T cd08263 157 PESLDYTESAVLGCAGFTAYGALKHAADVR--PGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKE-LGA 233 (367)
T ss_pred CCCCCHHHHhHhcchHHHHHHHHHhcccCC--CCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-hCC
Confidence 999999999999999999999998877655 999999997799999999999999998 9999989999998877 999
Q ss_pred CeEeeCccHHHH---Hhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC--CcccChhhHhccCcEEEEee
Q 018158 231 DEFILSTNAMQM---QAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA--PFELPSFPLIFGKRSVKGSM 303 (360)
Q Consensus 231 ~~~v~~~~~~~~---~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~ 303 (360)
++++++++.... ... ++++|++||++++......++++++++|+++.+|.... ...+....++.+++++.++.
T Consensus 234 ~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (367)
T cd08263 234 THTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSY 313 (367)
T ss_pred ceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEecC
Confidence 999887654322 222 56799999999986457899999999999999986542 23344455556788887765
Q ss_pred cCC-HHHHHHHHHHHhcCCCccc--e-EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 304 TGG-MRETQEMMNVCGKYNITCN--I-EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 304 ~~~-~~~~~~~~~~l~~~~l~~~--i-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
... .+.++.+++++.++.+.+. + +.|+++++.+|++.+++++..||+|++
T Consensus 314 ~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 314 GARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred CCCcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 433 4678899999999998763 3 789999999999999999988999874
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu |
| >cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-40 Score=299.32 Aligned_cols=315 Identities=19% Similarity=0.287 Sum_probs=259.5
Q ss_pred ceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCC
Q 018158 11 SVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVG 90 (360)
Q Consensus 11 ~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 90 (360)
+|.++ .+ ++++++++++.|+++++||+||+.++++|++|++...|.++ .|.++|||++|+|+++|++ +++|
T Consensus 2 ~a~~~--~~-~~~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G 72 (319)
T cd08242 2 KALVL--DG-GLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVG 72 (319)
T ss_pred eeEEE--eC-CCcEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCC
Confidence 44444 33 46899999999999999999999999999999999888653 5778999999999999997 7899
Q ss_pred CEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhh
Q 018158 91 DRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITV 170 (360)
Q Consensus 91 d~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta 170 (360)
|+|...+. .+|+.|.+|..|.++.|..... .+. ...+|+|++|+.++.+.++++|++++.++++.+ ....++
T Consensus 73 ~~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~ 144 (319)
T cd08242 73 KRVVGEIN-IACGRCEYCRRGLYTHCPNRTV--LGI----VDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAA 144 (319)
T ss_pred CeEEECCC-cCCCCChhhhCcCcccCCCCcc--cCc----cCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHH
Confidence 99977544 4699999999999999986321 111 023699999999999999999999999888754 444566
Q ss_pred hchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcC
Q 018158 171 FCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLD 250 (360)
Q Consensus 171 ~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d 250 (360)
|.++.. .. ++++++++|+|+|.+|++++|+|+.+|++|+++++++++++.+++ +|++.++++.+. ..+.++|
T Consensus 145 ~~~~~~-~~--~~~g~~vlV~g~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~----~~~~~~d 216 (319)
T cd08242 145 LEILEQ-VP--ITPGDKVAVLGDGKLGLLIAQVLALTGPDVVLVGRHSEKLALARR-LGVETVLPDEAE----SEGGGFD 216 (319)
T ss_pred HHHHHh-cC--CCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-cCCcEEeCcccc----ccCCCCC
Confidence 766644 33 449999999988999999999999999999999999999999998 999888876543 2356799
Q ss_pred EEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCC--ccce-E
Q 018158 251 FILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNI--TCNI-E 327 (360)
Q Consensus 251 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l--~~~i-~ 327 (360)
+++|++|....+..++++++++|+++..+.......++...+..++.++.++.... ++.+++++.++.+ .+.+ +
T Consensus 217 ~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~l~~~~~~~~ 293 (319)
T cd08242 217 VVVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCGP---FAPALRLLRKGLVDVDPLITA 293 (319)
T ss_pred EEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEeccc---HHHHHHHHHcCCCChhhceEE
Confidence 99999988667889999999999999887655555566666777888888876543 7788899999998 3445 8
Q ss_pred EECCccHHHHHHHHHcCCCceeEEEec
Q 018158 328 VIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 328 ~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
.|+++++++|++.+.++. .+|+|+++
T Consensus 294 ~~~l~~~~~a~~~~~~~~-~~k~vi~~ 319 (319)
T cd08242 294 VYPLEEALEAFERAAEPG-ALKVLLRP 319 (319)
T ss_pred EEeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence 999999999999998776 48999863
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta |
| >cd08232 idonate-5-DH L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=300.24 Aligned_cols=328 Identities=23% Similarity=0.378 Sum_probs=265.0
Q ss_pred cCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhc-cCCC--CCCCCCccccccceEEEEecCCCCCCCCCCEEE
Q 018158 18 HDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVK-NDWG--ITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94 (360)
Q Consensus 18 ~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~-g~~~--~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~ 94 (360)
+.+.+.+.+++.+.|+++++||+||+.++++|++|+..++ +.++ ...+|.++|+|++|+|+++|++|+.|++||+|+
T Consensus 3 ~~~~~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~ 82 (339)
T cd08232 3 IHAAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVA 82 (339)
T ss_pred eccCCceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEE
Confidence 3556899999999999999999999999999999998764 3221 224577899999999999999999999999998
Q ss_pred eccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchh
Q 018158 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPM 174 (360)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l 174 (360)
+. ..+.|+.|.+|..|+.+.|.++.+. |....-...+|+|++|+.++.+.++++|+++++++++. ...+.+||+++
T Consensus 83 ~~-~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l 158 (339)
T cd08232 83 VN-PSRPCGTCDYCRAGRPNLCLNMRFL--GSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAV 158 (339)
T ss_pred Ec-cCCcCCCChHHhCcCcccCccccce--eeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHH
Confidence 76 4557999999999999999985331 11000012469999999999999999999999998865 57778999998
Q ss_pred hccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHH--HHhcCCCcCE
Q 018158 175 KDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQ--MQAGKRTLDF 251 (360)
Q Consensus 175 ~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~--~~~~~~~~d~ 251 (360)
..... .++++|||.|+|.+|++++|+|+.+|+ +|+++++++++.+.+++ +|+++++++++... ......++|+
T Consensus 159 ~~~~~---~~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~vd~ 234 (339)
T cd08232 159 NRAGD---LAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARA-MGADETVNLARDPLAAYAADKGDFDV 234 (339)
T ss_pred HhcCC---CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-cCCCEEEcCCchhhhhhhccCCCccE
Confidence 77653 289999998889999999999999999 79999988888887777 99999888765431 1112356999
Q ss_pred EEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc--ce-EE
Q 018158 252 ILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC--NI-EV 328 (360)
Q Consensus 252 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~--~i-~~ 328 (360)
++|+.|....+..++++++++|+++.+|............++.+++++.+.... .+.++.+++++.++.+++ .+ ++
T Consensus 235 vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~ 313 (339)
T cd08232 235 VFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRF-DDEFAEAVRLLAAGRIDVRPLITAV 313 (339)
T ss_pred EEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEecC-HHHHHHHHHHHHcCCCCchhheeEE
Confidence 999998765688999999999999999865433334444456677888776543 457888999999998853 24 89
Q ss_pred ECCccHHHHHHHHHcCCCceeEEEec
Q 018158 329 IKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 329 ~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
|+++++++|++.+.+++..||+|+++
T Consensus 314 ~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 314 FPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred ecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 99999999999999888889999874
|
L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-40 Score=302.63 Aligned_cols=295 Identities=18% Similarity=0.194 Sum_probs=242.0
Q ss_pred CCCCCceEEEEeC----CCCCCCeEEEEEeeeecccchhhhhccCCCC-CCCCCcccccc--ceEEEEecCCCCCCCCCC
Q 018158 19 DPSGKITPYIFKR----RENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEI--TGIITKVGSNVKNFKVGD 91 (360)
Q Consensus 19 ~~~~~l~~~~~~~----p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~--~G~V~~vG~~v~~~~~Gd 91 (360)
.++..|++++.+. |+|++|||||||++++||+.|++.+.|.+.. ..+|.++|++. .|.+..+|+.+++|++||
T Consensus 16 ~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd 95 (338)
T cd08295 16 PKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSGNPDFKVGD 95 (338)
T ss_pred CCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecCCCCCCCCC
Confidence 3345899999887 7899999999999999999999998885432 35678888754 566666888899999999
Q ss_pred EEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeec-ceeEECC-CCCCcc-ccccccchhh
Q 018158 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADY-RFVVHVP-ENIAMD-AAAPLLCAGI 168 (360)
Q Consensus 92 ~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~-~~~~~iP-~~~~~~-~aa~l~~~~~ 168 (360)
+|+. .|+|+||+++++ +.++++| ++++++ +++++++++.
T Consensus 96 ~V~~--------------------------------------~g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~ 137 (338)
T cd08295 96 LVWG--------------------------------------FTGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGL 137 (338)
T ss_pred EEEe--------------------------------------cCCceeEEEecchhceeecCCCCCCHHHHHHhcccHHH
Confidence 9974 268999999999 7999995 678876 7899999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH-HH---HH
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA-MQ---MQ 243 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~-~~---~~ 243 (360)
|||+++.....++ +|++++|+|+ |++|++++|+|+.+|++|+++++++++.+.+++++|+++++++.+. +. ..
T Consensus 138 tA~~~l~~~~~~~--~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~ 215 (338)
T cd08295 138 TAYAGFYEVCKPK--KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALK 215 (338)
T ss_pred HHHHHHHHhcCCC--CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHH
Confidence 9999997766655 9999999999 9999999999999999999999999999998877999999986532 11 12
Q ss_pred h-cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-c-----ccChhhHhccCcEEEEeecCCH-----HHHH
Q 018158 244 A-GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-F-----ELPSFPLIFGKRSVKGSMTGGM-----RETQ 311 (360)
Q Consensus 244 ~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-----~~~~~~~~~~~~~i~~~~~~~~-----~~~~ 311 (360)
. .+.++|++||++|+. .+..++++++++|+++.+|..... . ..+...+..+++++.++..... +.++
T Consensus 216 ~~~~~gvd~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 294 (338)
T cd08295 216 RYFPNGIDIYFDNVGGK-MLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLE 294 (338)
T ss_pred HhCCCCcEEEEECCCHH-HHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHH
Confidence 2 246899999999974 679999999999999999865421 1 1233556677888888654332 3467
Q ss_pred HHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 312 EMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 312 ~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
++++++.++.+++.+ ..|+++++++|++.+++++..||+|+++
T Consensus 295 ~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 295 EMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHHHHHHCCCeEceeecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 888999999998765 7899999999999999999899999874
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=296.92 Aligned_cols=328 Identities=27% Similarity=0.425 Sum_probs=273.4
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|+++++. .+++.+.+++.|.|++.+++|+|+++++++|++|++...|.++....|.++|||++|+|+++|++++.|++
T Consensus 1 m~a~~~~--~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~ 78 (332)
T cd08259 1 MKAAILH--KPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKP 78 (332)
T ss_pred CeEEEEe--cCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCC
Confidence 3444443 35678999999999999999999999999999999999887655556789999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
||+|++.... .|+.|.+|..+..++|.+. ...| ....|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus 79 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~t 150 (332)
T cd08259 79 GDRVILYYYI-PCGKCEYCLSGEENLCRNR--AEYG-----EEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGT 150 (332)
T ss_pred CCEEEECCCC-CCcCChhhhCCCcccCCCc--cccc-----cccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHH
Confidence 9999886544 6999999999999999863 2222 245799999999999999999999999999999999999
Q ss_pred hhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH-HHHHhcCC
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA-MQMQAGKR 247 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~-~~~~~~~~ 247 (360)
||+++.. ..++ ++++++|+|+ |++|++++++++..|++|+++++++++.+.+.+ +|.+.+++..+. +.... ..
T Consensus 151 a~~~l~~-~~~~--~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~ 225 (332)
T cd08259 151 AVHALKR-AGVK--KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKE-LGADYVIDGSKFSEDVKK-LG 225 (332)
T ss_pred HHHHHHH-hCCC--CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH-cCCcEEEecHHHHHHHHh-cc
Confidence 9999987 5544 9999999999 999999999999999999999999998888877 898877765541 11222 23
Q ss_pred CcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCc-ccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccce
Q 018158 248 TLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPF-ELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNI 326 (360)
Q Consensus 248 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i 326 (360)
++|++++++|... ...++++++++|+++.+|...... .+.......++..+.++.....++++.+++++.++.+.+.+
T Consensus 226 ~~d~v~~~~g~~~-~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 304 (332)
T cd08259 226 GADVVIELVGSPT-IEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKIKPVI 304 (332)
T ss_pred CCCEEEECCChHH-HHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCccce
Confidence 7999999998764 688999999999999998754322 22333344567777777666678889999999999987765
Q ss_pred -EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 327 -EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 327 -~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
+.|+++++++|++.+.+++..||++++
T Consensus 305 ~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 305 DRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred eEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 899999999999999998888999874
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=299.36 Aligned_cols=321 Identities=23% Similarity=0.355 Sum_probs=263.1
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|+++++...+ .+.+++++.+.|+++++||+||+.++++|++|++.+.+. ....+|.++|||++|+|+++|++++.|++
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 78 (325)
T cd08264 1 MKALVFEKSG-IENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVKPMPHIPGAEFAGVVEEVGDHVKGVKK 78 (325)
T ss_pred CeeEEeccCC-CCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCCCCCeecccceeEEEEEECCCCCCCCC
Confidence 3455543333 478899998888899999999999999999999887652 22245778999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
||+|++.+.. +|+.|.+|..|.+++|.+..+ .| ....|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus 79 Gd~V~~~~~~-~~~~c~~~~~~~~~~~~~~~~--~~-----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~ 150 (325)
T cd08264 79 GDRVVVYNRV-FDGTCDMCLSGNEMLCRNGGI--IG-----VVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALT 150 (325)
T ss_pred CCEEEECCCc-CCCCChhhcCCCccccCccce--ee-----ccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHH
Confidence 9999887654 899999999999999997432 12 235689999999999999999999999999999999999
Q ss_pred hhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH-HHHHhcCC
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA-MQMQAGKR 247 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~-~~~~~~~~ 247 (360)
||+++.. .. ++++++++|+|+ |++|++++++|+.+|++|+++++ .+.+++ +|++++++.++. .......+
T Consensus 151 a~~~l~~-~~--~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~~-~g~~~~~~~~~~~~~l~~~~~ 222 (325)
T cd08264 151 AYHALKT-AG--LGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLKE-FGADEVVDYDEVEEKVKEITK 222 (325)
T ss_pred HHHHHHh-cC--CCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHHH-hCCCeeecchHHHHHHHHHhC
Confidence 9999876 44 449999999999 99999999999999999988873 366666 999888877642 22222236
Q ss_pred CcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC-CCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccce
Q 018158 248 TLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE-APFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNI 326 (360)
Q Consensus 248 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i 326 (360)
++|+++|++|.. .+..++++++++|+++.+|... ....++...+..++.++.++..+.+++++.+++++...++ ...
T Consensus 223 ~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~ 300 (325)
T cd08264 223 MADVVINSLGSS-FWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAKDLKV-KVW 300 (325)
T ss_pred CCCEEEECCCHH-HHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCHHHHHHHHHHHHcCCc-eeE
Confidence 899999999975 6899999999999999998753 2345566677778889998888788889999999864442 234
Q ss_pred EEECCccHHHHHHHHHcCCCceeE
Q 018158 327 EVIKPDQINEALDRLARNDVRYRF 350 (360)
Q Consensus 327 ~~~~~~~~~~a~~~~~~~~~~gkv 350 (360)
+.|+++++++|++.+.+++..+|+
T Consensus 301 ~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 301 KTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred EEEcHHHHHHHHHHHHcCCCcccc
Confidence 899999999999999988777775
|
This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo |
| >PRK05396 tdh L-threonine 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=299.78 Aligned_cols=328 Identities=22% Similarity=0.297 Sum_probs=262.0
Q ss_pred ceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCC---CCCCCCCccccccceEEEEecCCCCCC
Q 018158 11 SVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDW---GITMYPVVPGHEITGIITKVGSNVKNF 87 (360)
Q Consensus 11 ~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~ 87 (360)
|+.++ .++++.+++.++|.|+|+++||+||++++++|++|++++.+.. ....+|.++|||++|+|+++|++++.|
T Consensus 2 ~~~~~--~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~ 79 (341)
T PRK05396 2 KALVK--LKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGF 79 (341)
T ss_pred ceEEE--ecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcC
Confidence 44444 4455789999999999999999999999999999999766532 122457789999999999999999999
Q ss_pred CCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchh
Q 018158 88 KVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAG 167 (360)
Q Consensus 88 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~ 167 (360)
++||+|++.+. ..|+.|.+|..+.+++|....+ . +...+|+|++|+.++.+.++++|+++++++++.+ ..+
T Consensus 80 ~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~ 150 (341)
T PRK05396 80 KVGDRVSGEGH-IVCGHCRNCRAGRRHLCRNTKG--V-----GVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPF 150 (341)
T ss_pred CCCCEEEECCC-CCCCCChhhhCcChhhCCCcce--e-----eecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHH
Confidence 99999988754 4899999999999999975321 1 1235799999999999999999999999888744 444
Q ss_pred hhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---HH
Q 018158 168 ITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQ---MQ 243 (360)
Q Consensus 168 ~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~ 243 (360)
.++++++.. ... +|++++|.|+|++|++++|+|+.+|+ +|+++++++++.+.+++ +|+++++++++.+. ..
T Consensus 151 ~~~~~~~~~--~~~--~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~ 225 (341)
T PRK05396 151 GNAVHTALS--FDL--VGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARK-MGATRAVNVAKEDLRDVMA 225 (341)
T ss_pred HHHHHHHHc--CCC--CCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-hCCcEEecCccccHHHHHH
Confidence 555544432 223 89999998889999999999999999 68888888888888888 99999988765422 22
Q ss_pred hc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCC-HHHHHHHHHHHhcC
Q 018158 244 AG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGG-MRETQEMMNVCGKY 320 (360)
Q Consensus 244 ~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~l~~~ 320 (360)
.. ++++|++|||.|....+..++++++++|+++.+|.......++...+..+++++.++.... .+.+..+++++.++
T Consensus 226 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 305 (341)
T PRK05396 226 ELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSG 305 (341)
T ss_pred HhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcC
Confidence 22 5689999999998777899999999999999999766555555566777888888765322 34456778888888
Q ss_pred -CCccce-EEECCccHHHHHHHHHcCCCceeEEEecC
Q 018158 321 -NITCNI-EVIKPDQINEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 321 -~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
++.+.+ +.|+++++++|++.+.+++ .||++++++
T Consensus 306 ~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~ 341 (341)
T PRK05396 306 LDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD 341 (341)
T ss_pred CChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence 454444 8999999999999998887 799999875
|
|
| >cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=299.39 Aligned_cols=323 Identities=22% Similarity=0.321 Sum_probs=264.9
Q ss_pred CCCCceEEEEeCCCCC-CCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccC
Q 018158 20 PSGKITPYIFKRRENG-VNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCL 98 (360)
Q Consensus 20 ~~~~l~~~~~~~p~~~-~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 98 (360)
+++.+++++++.|.|. ++||+||+.++++|+.|++...|.++ ..+|.++|+|++|+|+++|++++.+++||+|++.+.
T Consensus 8 ~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 86 (344)
T cd08284 8 GPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFT 86 (344)
T ss_pred cCCCceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCCCEEEEccc
Confidence 3468999999999985 99999999999999999999888763 445788999999999999999999999999988765
Q ss_pred ccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecc--eeEECCCCCCccccccccchhhhhhchhhc
Q 018158 99 AAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYR--FVVHVPENIAMDAAAPLLCAGITVFCPMKD 176 (360)
Q Consensus 99 ~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~ 176 (360)
. .|+.|.+|..+..+.|.+.... |.. .....+|+|++|+.++.+ .++++|+++++++++++++.+.|||+++..
T Consensus 87 ~-~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta~~~~~~ 162 (344)
T cd08284 87 I-ACGECFYCRRGQSGRCAKGGLF--GYA-GSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAKR 162 (344)
T ss_pred C-CCCCChHHhCcCcccCCCCccc--ccc-ccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHHHhhhHh
Confidence 4 7999999999999999864211 100 001246999999999975 999999999999999999999999999976
Q ss_pred cCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccH---HHHHhc--CCCcC
Q 018158 177 NNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNA---MQMQAG--KRTLD 250 (360)
Q Consensus 177 ~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~---~~~~~~--~~~~d 250 (360)
.. +.++++|+|+|+|.+|++++|+|+.+|+ +|+++++++++...+++ +|+. .++.+.. ...... ++++|
T Consensus 163 -~~--~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~-~g~~-~~~~~~~~~~~~l~~~~~~~~~d 237 (344)
T cd08284 163 -AQ--VRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAA-LGAE-PINFEDAEPVERVREATEGRGAD 237 (344)
T ss_pred -cC--CccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH-hCCe-EEecCCcCHHHHHHHHhCCCCCC
Confidence 34 4499999999889999999999999997 89999888888888877 9975 3444432 122222 46899
Q ss_pred EEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc---ce
Q 018158 251 FILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC---NI 326 (360)
Q Consensus 251 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~---~i 326 (360)
++||++|....+..++++++++|+++.+|.... .........+.+++++.+......+.++++++++.++.+++ .+
T Consensus 238 vvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 317 (344)
T cd08284 238 VVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGRLDLEFLID 317 (344)
T ss_pred EEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHHcCCCChHHhEe
Confidence 999999976678999999999999999997652 33344445667788877655555678899999999999875 34
Q ss_pred EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 327 EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 327 ~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
+.|++++++++++.+.+++. ||+|++
T Consensus 318 ~~~~~~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 318 HRMPLEEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred eeecHHHHHHHHHHHhcCCc-eEEEec
Confidence 88999999999999998887 999985
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical |
| >cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-39 Score=298.46 Aligned_cols=327 Identities=20% Similarity=0.260 Sum_probs=266.2
Q ss_pred cceeEEeccCCCCCceEEEEeCCCC-CCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRREN-GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|+++++. +++.+++++.|.|.| +++||+||+.++++|++|++.+.|.++ ...|.++|||++|+|+++|++++.++
T Consensus 1 m~~~~~~---~~~~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (345)
T cd08287 1 MRATVIH---GPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP-TRAPAPIGHEFVGVVEEVGSEVTSVK 76 (345)
T ss_pred CceeEEe---cCCceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC-CCCCcccccceEEEEEEeCCCCCccC
Confidence 4555553 346799999999986 899999999999999999998888763 34578999999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecc--eeEECCCCCCccccc-----
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYR--FVVHVPENIAMDAAA----- 161 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~aa----- 161 (360)
+||+|++. ....|+.|..|..|+.+.|.+..+ . +....|+|++|+.++.+ .++++|++++++++.
T Consensus 77 ~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~ 148 (345)
T cd08287 77 PGDFVIAP-FAISDGTCPFCRAGFTTSCVHGGF--W-----GAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLL 148 (345)
T ss_pred CCCEEEec-cccCCCCChhhhCcCcccCCCCCc--c-----cCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhH
Confidence 99999873 455699999999999999986432 1 22467999999999975 899999999882221
Q ss_pred cccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHH
Q 018158 162 PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAM 240 (360)
Q Consensus 162 ~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 240 (360)
++...+.+||+++.. .. ++++++++|.|+|++|++++|+|+.+|++ ++++++++++.+.+++ +|+++++++.+..
T Consensus 149 ~l~~~~~~a~~~~~~-~~--~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~-~ga~~v~~~~~~~ 224 (345)
T cd08287 149 ALSDVMGTGHHAAVS-AG--VRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALARE-FGATDIVAERGEE 224 (345)
T ss_pred hhhcHHHHHHHHHHh-cC--CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-cCCceEecCCccc
Confidence 223567888998863 34 44999999988899999999999999996 8888888888888887 9999999887653
Q ss_pred HH---Hhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHH
Q 018158 241 QM---QAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMN 315 (360)
Q Consensus 241 ~~---~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 315 (360)
.. ... +.++|+++|++|....+..++++++++|+++.+|.......++....+.+++++.+......+.++++++
T Consensus 225 ~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (345)
T cd08287 225 AVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLD 304 (345)
T ss_pred HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHH
Confidence 22 222 4579999999987767899999999999999998765444455545677889998876666778999999
Q ss_pred HHhcCCCcc---ceEEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 316 VCGKYNITC---NIEVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 316 ~l~~~~l~~---~i~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
++.++++++ .++.++++++++|++.+.+++.. |++|+
T Consensus 305 ~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 344 (345)
T cd08287 305 DVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLR 344 (345)
T ss_pred HHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeC
Confidence 999999875 23899999999999999887765 99985
|
This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-39 Score=298.09 Aligned_cols=319 Identities=24% Similarity=0.375 Sum_probs=268.9
Q ss_pred CCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCcc
Q 018158 21 SGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAA 100 (360)
Q Consensus 21 ~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 100 (360)
++.+.+++.+.|++.+++|+||++++++|+.|+..+.|.+....+|.++|+|++|+|+++|++++.|++||+|++.+ ..
T Consensus 9 ~~~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd~V~~~~-~~ 87 (343)
T cd08235 9 PNDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGDRVFVAP-HV 87 (343)
T ss_pred CCceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCCEEEEcc-CC
Confidence 35799999999999999999999999999999999888664345577899999999999999999999999998864 55
Q ss_pred CCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecce-----eEECCCCCCccccccccchhhhhhchhh
Q 018158 101 ACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRF-----VVHVPENIAMDAAAPLLCAGITVFCPMK 175 (360)
Q Consensus 101 ~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~-----~~~iP~~~~~~~aa~l~~~~~ta~~~l~ 175 (360)
+|+.|.+|..|+.++|.+..+ . +....|+|++|+.++.+. ++++|+++++.+++.+ ..+.+||+++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l~ 159 (343)
T cd08235 88 PCGECHYCLRGNENMCPNYKK--F-----GNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCINAQR 159 (343)
T ss_pred CCCCChHHHCcCcccCCCcce--e-----ccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHHHHHHH
Confidence 788999999999999987422 1 224569999999999998 9999999999998766 78889999997
Q ss_pred ccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHHHHH---hc--CCCc
Q 018158 176 DNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAMQMQ---AG--KRTL 249 (360)
Q Consensus 176 ~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~---~~--~~~~ 249 (360)
.. . +.+|++|+|+|+|.+|++++|+|+..|++ |+++++++++.+.+++ +|.++++++++.+... .. ++++
T Consensus 160 ~~-~--~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~-~g~~~~~~~~~~~~~~~i~~~~~~~~v 235 (343)
T cd08235 160 KA-G--IKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKK-LGADYTIDAAEEDLVEKVRELTDGRGA 235 (343)
T ss_pred hc-C--CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hCCcEEecCCccCHHHHHHHHhCCcCC
Confidence 65 4 44999999998899999999999999999 9999999999998877 9998888877653222 12 4679
Q ss_pred CEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC--cccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc--c
Q 018158 250 DFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP--FELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC--N 325 (360)
Q Consensus 250 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~--~ 325 (360)
|+++|+++....+...+++++++|+++.+|..... ..+....+..+++++.++.....+.++.+++++.++.+.+ .
T Consensus 236 d~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~ 315 (343)
T cd08235 236 DVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIASGKIDVKDL 315 (343)
T ss_pred CEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHHcCCCChHHh
Confidence 99999999766678999999999999999865432 3444456677888888887777778899999999999863 3
Q ss_pred e-EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 326 I-EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 326 i-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
+ ..|+++++.+|++.+.+++ .||+|+.
T Consensus 316 ~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 316 ITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred eeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 3 7899999999999999999 8999873
|
Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i |
| >cd05285 sorbitol_DH Sorbitol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=298.77 Aligned_cols=321 Identities=23% Similarity=0.365 Sum_probs=261.5
Q ss_pred CCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccC-CC--CCCCCCccccccceEEEEecCCCCCCCCCCEEEe
Q 018158 19 DPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKND-WG--ITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAV 95 (360)
Q Consensus 19 ~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~-~~--~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 95 (360)
.++..+.+++.+.|.+.++||+||+.++++|+.|++.+.+. .+ ....|.++|+|++|+|+++|++++.|++||+|++
T Consensus 5 ~~~~~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 84 (343)
T cd05285 5 HGPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAI 84 (343)
T ss_pred ecCCceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEE
Confidence 34478999999999999999999999999999999876432 11 1235678999999999999999999999999987
Q ss_pred ccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhh
Q 018158 96 GCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMK 175 (360)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~ 175 (360)
.+ ..+|+.|.+|+.|.+++|.+..+. +. ....|+|++|+.++++.++++|+++++++++.+ ..+.+||+++
T Consensus 85 ~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~- 155 (343)
T cd05285 85 EP-GVPCRTCEFCKSGRYNLCPDMRFA--AT----PPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC- 155 (343)
T ss_pred cc-ccCCCCChhHhCcCcccCcCcccc--cc----ccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-
Confidence 64 459999999999999999763221 10 124699999999999999999999999998876 5778888887
Q ss_pred ccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHHH------HHhc--C
Q 018158 176 DNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAMQ------MQAG--K 246 (360)
Q Consensus 176 ~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~------~~~~--~ 246 (360)
....+ +++++++|.|+|++|++++|+|+.+|++ |+++++++++.+.+++ +|+++++++++.+. .... +
T Consensus 156 ~~~~~--~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~~~ 232 (343)
T cd05285 156 RRAGV--RPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKE-LGATHTVNVRTEDTPESAEKIAELLGG 232 (343)
T ss_pred HhcCC--CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-cCCcEEeccccccchhHHHHHHHHhCC
Confidence 44444 4999999998899999999999999997 9999989999998877 99999988765421 2222 4
Q ss_pred CCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCc--c
Q 018158 247 RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNIT--C 324 (360)
Q Consensus 247 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~--~ 324 (360)
+++|++|||.|....+...+++++++|+++.+|.......++...+..+++++.++.... +.++.+++++.++.+. +
T Consensus 233 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~~ 311 (343)
T cd05285 233 KGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYA-NTYPTAIELLASGKVDVKP 311 (343)
T ss_pred CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccCh-HHHHHHHHHHHcCCCCchH
Confidence 679999999998656789999999999999998755444445556677788888765443 6788899999999864 3
Q ss_pred ce-EEECCccHHHHHHHHHcCC-CceeEEE
Q 018158 325 NI-EVIKPDQINEALDRLARND-VRYRFVI 352 (360)
Q Consensus 325 ~i-~~~~~~~~~~a~~~~~~~~-~~gkvvi 352 (360)
.+ +.|+++++.+|++.+.+++ ..+|++|
T Consensus 312 ~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 312 LITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred hEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 33 8899999999999999875 4589998
|
Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=297.66 Aligned_cols=304 Identities=20% Similarity=0.292 Sum_probs=253.1
Q ss_pred cceeEEeccCCC-CCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCC
Q 018158 10 QSVVGWAAHDPS-GKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNF 87 (360)
Q Consensus 10 ~~~~~~~~~~~~-~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~ 87 (360)
|+++++.-.+++ +.++++++|.|.+.++||+|||.++++|++|++.+.|.++ ....|.++|||++|+|+++|++++.|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 455555433322 3588999999999999999999999999999999888764 23457889999999999999999999
Q ss_pred CCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchh
Q 018158 88 KVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAG 167 (360)
Q Consensus 88 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~ 167 (360)
++||+|++. ...|+|++|+.++++.++++|+++++++++.+++.+
T Consensus 81 ~~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~ 125 (324)
T cd08292 81 QVGQRVAVA-----------------------------------PVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMP 125 (324)
T ss_pred CCCCEEEec-----------------------------------cCCCcceeEEEEchHHeEECCCCCCHHHhhhccccH
Confidence 999999862 125999999999999999999999999999999999
Q ss_pred hhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHH---
Q 018158 168 ITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQ--- 243 (360)
Q Consensus 168 ~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~--- 243 (360)
.+||+++.. .. +.+|++++|+|+ |.+|++++|+|+.+|++|+++.+++++.+.+++ +|+++++++.+.+...
T Consensus 126 ~ta~~~~~~-~~--~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~i~ 201 (324)
T cd08292 126 LSALMLLDF-LG--VKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-LGIGPVVSTEQPGWQDKVR 201 (324)
T ss_pred HHHHHHHHh-hC--CCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-cCCCEEEcCCCchHHHHHH
Confidence 999998865 44 449999999998 999999999999999999999999999999988 8998888877643222
Q ss_pred hc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC-CCcccChhhHhccCcEEEEeecCC----------HHHH
Q 018158 244 AG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE-APFELPSFPLIFGKRSVKGSMTGG----------MRET 310 (360)
Q Consensus 244 ~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~----------~~~~ 310 (360)
.. ++++|++||++|.. ....++++++++|+++.+|... ....+....++.++.++.++.... .+.+
T Consensus 202 ~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (324)
T cd08292 202 EAAGGAPISVALDSVGGK-LAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMI 280 (324)
T ss_pred HHhCCCCCcEEEECCCCh-hHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHH
Confidence 22 56899999999986 5689999999999999998753 234455555667889988876532 2457
Q ss_pred HHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 311 QEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 311 ~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
+.+++++.++.+++.+ +.|+++++++|++.+.+....||++++
T Consensus 281 ~~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 281 AELLTLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred HHHHHHHHCCCccCccccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 8888999999998655 899999999999999988878899874
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >PLN02702 L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-39 Score=297.92 Aligned_cols=321 Identities=24% Similarity=0.378 Sum_probs=256.9
Q ss_pred CCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC---CCCCCCccccccceEEEEecCCCCCCCCCCEEEec
Q 018158 20 PSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG---ITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96 (360)
Q Consensus 20 ~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 96 (360)
+++.+++++.+.|+++++||+||++++++|++|++...+... ...+|.++|||++|+|+++|+++++|++||+|++.
T Consensus 25 ~~~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 104 (364)
T PLN02702 25 GVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALE 104 (364)
T ss_pred cCCceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEc
Confidence 347899999999989999999999999999999998876321 22357789999999999999999999999999886
Q ss_pred cCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhc
Q 018158 97 CLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKD 176 (360)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~ 176 (360)
+. .+|+.|..|.+|.++.|.+..+ .+. ....|+|++|+.++.+.++++|+++++++++.. ....++|+++..
T Consensus 105 ~~-~~~~~c~~c~~g~~~~c~~~~~--~~~----~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~~~~~ 176 (364)
T PLN02702 105 PG-ISCWRCNLCKEGRYNLCPEMKF--FAT----PPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVHACRR 176 (364)
T ss_pred CC-CCCCCCcchhCcCcccCCCccc--cCC----CCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHHHHHh
Confidence 55 4899999999999999986322 111 123699999999999999999999999888752 233346777633
Q ss_pred cCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCcc--H---HHHH----hcC
Q 018158 177 NNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTN--A---MQMQ----AGK 246 (360)
Q Consensus 177 ~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~--~---~~~~----~~~ 246 (360)
.. +.++++++|+|+|++|++++|+|+.+|++ |+++++++++.+.+++ +|+++++++.. . .... ..+
T Consensus 177 -~~--~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (364)
T PLN02702 177 -AN--IGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQ-LGADEIVLVSTNIEDVESEVEEIQKAMG 252 (364)
T ss_pred -cC--CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hCCCEEEecCcccccHHHHHHHHhhhcC
Confidence 33 44999999998899999999999999996 7888888888888887 99988776431 1 1111 124
Q ss_pred CCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCc--c
Q 018158 247 RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNIT--C 324 (360)
Q Consensus 247 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~--~ 324 (360)
+++|++||++|....+..++++++++|+++.+|.......+....+..+++++.++... ...++.+++++.++.+. +
T Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~l~~~~ 331 (364)
T PLN02702 253 GGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRY-RNTWPLCLEFLRSGKIDVKP 331 (364)
T ss_pred CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEeccC-hHHHHHHHHHHHcCCCCchH
Confidence 57999999999766789999999999999999975444444556677888999887653 35788899999999885 3
Q ss_pred ce-EEECC--ccHHHHHHHHHcCCCceeEEEe
Q 018158 325 NI-EVIKP--DQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 325 ~i-~~~~~--~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
.+ +.|++ +++++|++.+++++..+|+++.
T Consensus 332 ~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 332 LITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred heEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 34 78665 7999999999998888999985
|
|
| >cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=299.65 Aligned_cols=323 Identities=22% Similarity=0.268 Sum_probs=259.3
Q ss_pred cceeEEeccCCCCCceEEE-EeCCCCCCCeEEEEEeeeecccchhhhhccCCC--------------------CCCCCCc
Q 018158 10 QSVVGWAAHDPSGKITPYI-FKRRENGVNDVTIKILYCGICHTDIHHVKNDWG--------------------ITMYPVV 68 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~-~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~--------------------~~~~p~~ 68 (360)
|++..+...+.+..+.+.+ .+.|++.+++|+|||.++++|++|+++..|.++ ....|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 4555554444445677764 577788999999999999999999998877542 2346789
Q ss_pred cccccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeeccee
Q 018158 69 PGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFV 148 (360)
Q Consensus 69 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~ 148 (360)
+|||++|+|+++|++++.|++||+|++.+. ..|+.|..|. .|.. .+...+|+|++|+.++.+.+
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~-----~~~~----------~~~~~~g~~~~~~~v~~~~~ 144 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPS-IRDPPEDDPA-----DIDY----------IGSERDGGFAEYTVVPAENA 144 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecC-cCCCCccccc-----cccc----------cCCCCCccceEEEEecHHHc
Confidence 999999999999999999999999987543 3466655432 1111 11124599999999999999
Q ss_pred EECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH
Q 018158 149 VHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL 227 (360)
Q Consensus 149 ~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~ 227 (360)
+++|+++++.+++++++.+.|||+++.. ..+ .++++++|+|+ |++|++++++|+.+|++|+++++++ +++.+++
T Consensus 145 ~~ip~~~~~~~~a~l~~~~~ta~~~~~~-~~~--~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~~- 219 (350)
T cd08274 145 YPVNSPLSDVELATFPCSYSTAENMLER-AGV--GAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVRA- 219 (350)
T ss_pred eeCCCCCCHHHHHhcccHHHHHHHHHhh-cCC--CCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHHh-
Confidence 9999999999999999999999999844 444 49999999999 9999999999999999999988665 7888877
Q ss_pred cCCCeEeeCccHHH--H-HhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-cccChhhHhccCcEEEEee
Q 018158 228 LGADEFILSTNAMQ--M-QAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-FELPSFPLIFGKRSVKGSM 303 (360)
Q Consensus 228 ~g~~~~v~~~~~~~--~-~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~ 303 (360)
+|++.+++...... . ...++++|++||++|+. .+..++++++++|+++.+|..... ..++...++.++.++.++.
T Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
T cd08274 220 LGADTVILRDAPLLADAKALGGEPVDVVADVVGGP-LFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGST 298 (350)
T ss_pred cCCeEEEeCCCccHHHHHhhCCCCCcEEEecCCHH-HHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEee
Confidence 99876665443211 1 12256899999999975 679999999999999999865443 4556666678899999988
Q ss_pred cCCHHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 304 TGGMRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 304 ~~~~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
....+.++++++++.++.+++.+ +.|+++++++|++.+.+++..||+++++
T Consensus 299 ~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 299 LGTREVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred cCCHHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 88788899999999999987765 8999999999999999988889999864
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-39 Score=301.48 Aligned_cols=326 Identities=21% Similarity=0.336 Sum_probs=260.8
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCC------C-CCCCCCccccccceEEEEecC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDW------G-ITMYPVVPGHEITGIITKVGS 82 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~------~-~~~~p~~~G~e~~G~V~~vG~ 82 (360)
++++++.. ..++++++|.|+++++||+||++++++|++|++.+.+.. + ...+|.++|||++|+|+++|+
T Consensus 29 ~~~~~~~~----~~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 104 (384)
T cd08265 29 LGSKVWRY----PELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGK 104 (384)
T ss_pred ceeEEEeC----CCEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECC
Confidence 44555542 369999999999999999999999999999998876421 1 134578899999999999999
Q ss_pred CCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCC-------
Q 018158 83 NVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENI------- 155 (360)
Q Consensus 83 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~------- 155 (360)
+++.|++||+|++.+. .+|+.|..|..|.+++|.+..+ .| ...+|+|++|+.++++.++++|+++
T Consensus 105 ~v~~~~~Gd~V~~~~~-~~~~~~~~c~~~~~~~~~~~~~--~g-----~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~ 176 (384)
T cd08265 105 NVKNFEKGDPVTAEEM-MWCGMCRACRSGSPNHCKNLKE--LG-----FSADGAFAEYIAVNARYAWEINELREIYSEDK 176 (384)
T ss_pred CCCCCCCCCEEEECCC-CCCCCChhhhCcCcccCCCcce--ee-----ecCCCcceeeEEechHHeEECCccccccccCC
Confidence 9999999999988765 4899999999999999987432 22 1347999999999999999999863
Q ss_pred Cccccccccchhhhhhchhhcc-CCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeE
Q 018158 156 AMDAAAPLLCAGITVFCPMKDN-NLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEF 233 (360)
Q Consensus 156 ~~~~aa~l~~~~~ta~~~l~~~-~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~ 233 (360)
+.+ +++++..+.+||+++... ..+ ++|++|+|+|+|++|++++|+|+.+|+ +|+++++++++.+.+++ +|++++
T Consensus 177 ~~~-~a~~~~~~~ta~~al~~~~~~~--~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~-~g~~~~ 252 (384)
T cd08265 177 AFE-AGALVEPTSVAYNGLFIRGGGF--RPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKE-MGADYV 252 (384)
T ss_pred CHH-HhhhhhHHHHHHHHHHhhcCCC--CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-cCCCEE
Confidence 444 566777888999998544 444 499999999889999999999999999 79999988888888888 999888
Q ss_pred eeCccH------HHHHhc--CCCcCEEEEcCCCc-ccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeec
Q 018158 234 ILSTNA------MQMQAG--KRTLDFILDTVSAK-HSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMT 304 (360)
Q Consensus 234 v~~~~~------~~~~~~--~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~ 304 (360)
+++++. ..+... ++++|+++|+.|.. ..+..++++++++|+++.+|.......+....+..+..++.++..
T Consensus 253 v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~ 332 (384)
T cd08265 253 FNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQG 332 (384)
T ss_pred EcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeec
Confidence 876632 112222 56899999999863 357889999999999999997654444455556667778887754
Q ss_pred C-CHHHHHHHHHHHhcCCCccc---eEEECCccHHHHHHHHHcCCCceeEEE
Q 018158 305 G-GMRETQEMMNVCGKYNITCN---IEVIKPDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 305 ~-~~~~~~~~~~~l~~~~l~~~---i~~~~~~~~~~a~~~~~~~~~~gkvvi 352 (360)
. ....+.++++++.++.+++. ++.|+++++++|++.+.++ ..||+++
T Consensus 333 ~~~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 333 HSGHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred cCCcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 2 33468899999999998752 3889999999999997665 4688876
|
This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi |
| >cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-39 Score=295.65 Aligned_cols=308 Identities=21% Similarity=0.275 Sum_probs=251.1
Q ss_pred CceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-----------CCCCCCccccccceEEEEecCCCCC-CCCC
Q 018158 23 KITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-----------ITMYPVVPGHEITGIITKVGSNVKN-FKVG 90 (360)
Q Consensus 23 ~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-----------~~~~p~~~G~e~~G~V~~vG~~v~~-~~~G 90 (360)
.+++++++.|+++++||+||+.++++|+.|++...|... ...+|.++|+|++|+|+++|+++++ |++|
T Consensus 10 ~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~~G 89 (341)
T cd08262 10 PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGPGTERKLKVG 89 (341)
T ss_pred ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeCCCCcCCCCCC
Confidence 899999999999999999999999999999998887221 2234778999999999999999997 9999
Q ss_pred CEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhh
Q 018158 91 DRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITV 170 (360)
Q Consensus 91 d~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta 170 (360)
|+|++.+. ..|+.|..|..|+. ....|+|++|+.++.+.++++|+++++++++ ++..+.+|
T Consensus 90 d~V~~~~~-~~~~~~~~~~~~~~-----------------~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a 150 (341)
T cd08262 90 TRVTSLPL-LLCGQGASCGIGLS-----------------PEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVG 150 (341)
T ss_pred CEEEecCC-cCCCCChhhhCCCC-----------------cCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHH
Confidence 99988765 57999999943221 0246999999999999999999999998776 66788899
Q ss_pred hchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHHH------H-
Q 018158 171 FCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAMQ------M- 242 (360)
Q Consensus 171 ~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~------~- 242 (360)
|+++ ...+ ++++++|+|+|+|++|.+++|+|+.+|++ ++++++++++.+.+++ +|++++++++.... .
T Consensus 151 ~~~~-~~~~--~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~ 226 (341)
T cd08262 151 LHAV-RRAR--LTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALA-MGADIVVDPAADSPFAAWAAEL 226 (341)
T ss_pred HHHH-HhcC--CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-cCCcEEEcCCCcCHHHHHHHHH
Confidence 9886 4444 44999999998899999999999999997 6777778888888877 99988888665311 1
Q ss_pred H-hcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCC
Q 018158 243 Q-AGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYN 321 (360)
Q Consensus 243 ~-~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~ 321 (360)
. ..++++|++||++|....+..++++++++|+++.+|...............+++++.++.....+.++++++++.++.
T Consensus 227 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 306 (341)
T cd08262 227 ARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFADALDALAEGK 306 (341)
T ss_pred HHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecccHHHHHHHHHHHHcCC
Confidence 1 125679999999987546788999999999999999764333333333345777877766666678899999999999
Q ss_pred Ccc--c-eEEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 322 ITC--N-IEVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 322 l~~--~-i~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
+.+ . .+.|+++++++|++.+.+++..||+|++
T Consensus 307 i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 307 VDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred CChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 875 2 3899999999999999999988999974
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=293.64 Aligned_cols=333 Identities=24% Similarity=0.344 Sum_probs=277.3
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|+++++...+.++.+.+.+.+.|++.+++|+|++.++++|++|++.+.|.+. ....|.++|||++|+|+++|++++.|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 3555554445667888988888889999999999999999999999888653 234577899999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++.+ ...|+.|.+|..+.++.|+.. .+.| ....|++++|+.++.+.++++|+++++++++.+++.+.
T Consensus 81 ~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~g-----~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ 152 (342)
T cd08266 81 PGQRVVIYP-GISCGRCEYCLAGRENLCAQY--GILG-----EHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFL 152 (342)
T ss_pred CCCEEEEcc-ccccccchhhccccccccccc--cccc-----cccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHH
Confidence 999998754 447999999999999999863 2233 23568999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHh---
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQA--- 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~--- 244 (360)
+||+++.....+. ++++++|+|+ +.+|++++++++..|++|+++++++++++.+.. ++.+.+++..+.+....
T Consensus 153 ~a~~~l~~~~~~~--~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 229 (342)
T cd08266 153 TAWHMLVTRARLR--PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKE-LGADYVIDYRKEDFVREVRE 229 (342)
T ss_pred HHHHHHHHhcCCC--CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCeEEecCChHHHHHHHH
Confidence 9999987666554 9999999999 899999999999999999999999999998877 88877776655322211
Q ss_pred --cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-cccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCC
Q 018158 245 --GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-FELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYN 321 (360)
Q Consensus 245 --~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~ 321 (360)
.++++|+++++.|.. .+..++++++++|+++.+|..... ........+.++.++.+........+..+++++.++.
T Consensus 230 ~~~~~~~d~~i~~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 308 (342)
T cd08266 230 LTGKRGVDVVVEHVGAA-TWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGK 308 (342)
T ss_pred HhCCCCCcEEEECCcHH-HHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCC
Confidence 145799999999876 578899999999999999876532 2333434567888998888877888999999999998
Q ss_pred Cccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 322 ITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 322 l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+.+.+ +.|+++++++|++.+.++...+|+++++
T Consensus 309 l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 309 LKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred cccceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 87765 8999999999999999888889999864
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-39 Score=296.41 Aligned_cols=288 Identities=13% Similarity=0.171 Sum_probs=237.4
Q ss_pred cCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEecc
Q 018158 18 HDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97 (360)
Q Consensus 18 ~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 97 (360)
..++..+++++.+.|+|++|||||||+++++|+.|.. |.+.....|.++|+|++|+|+++|+ .|++||+|+.
T Consensus 13 ~~~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~-- 84 (325)
T TIGR02825 13 YPTDSDFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLA-- 84 (325)
T ss_pred CCCCCceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEE--
Confidence 3566789999999999999999999999999997553 4333334578999999999999874 5999999974
Q ss_pred CccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEEC----CCCCCcccc-ccccchhhhhhc
Q 018158 98 LAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV----PENIAMDAA-APLLCAGITVFC 172 (360)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~i----P~~~~~~~a-a~l~~~~~ta~~ 172 (360)
.++|++|+.++.+.+.++ |++++++++ +++++.+.|||+
T Consensus 85 ------------------------------------~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~ 128 (325)
T TIGR02825 85 ------------------------------------SPGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYF 128 (325)
T ss_pred ------------------------------------ecCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHH
Confidence 146899999999988887 899999987 689999999999
Q ss_pred hhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH----HHhc-C
Q 018158 173 PMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ----MQAG-K 246 (360)
Q Consensus 173 ~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~----~~~~-~ 246 (360)
++.....++ +|++|||+|+ |++|++++|+||.+|++|+++++++++.+.+++ +|+++++++++.+. .... +
T Consensus 129 ~l~~~~~~~--~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~-lGa~~vi~~~~~~~~~~~~~~~~~ 205 (325)
T TIGR02825 129 GLLEICGVK--GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKK-LGFDVAFNYKTVKSLEETLKKASP 205 (325)
T ss_pred HHHHHhCCC--CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCEEEeccccccHHHHHHHhCC
Confidence 987666655 9999999998 999999999999999999999999999999988 99999998775311 1122 4
Q ss_pred CCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-----Ccc--cChhhHhccCcEEEEeecCC------HHHHHHH
Q 018158 247 RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-----PFE--LPSFPLIFGKRSVKGSMTGG------MRETQEM 313 (360)
Q Consensus 247 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~--~~~~~~~~~~~~i~~~~~~~------~~~~~~~ 313 (360)
+++|++||++|+. .+..++++++++|+++.+|.... ... .....+..+++++.++.... .+.++++
T Consensus 206 ~gvdvv~d~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 284 (325)
T TIGR02825 206 DGYDCYFDNVGGE-FSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKEL 284 (325)
T ss_pred CCeEEEEECCCHH-HHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHH
Confidence 6899999999986 46899999999999999986532 121 12334566788888775421 3467889
Q ss_pred HHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 314 MNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 314 ~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
++++.++++++.+ ..|+++++++|++.+++++..||+|++
T Consensus 285 ~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 285 LKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred HHHHHCCCcccceeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 9999999998766 789999999999999999989999974
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=293.97 Aligned_cols=326 Identities=23% Similarity=0.402 Sum_probs=266.0
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|+|+++.- . +.+.+++.+.|++.++||+||+.++++|+.|+....+.+ ...+|.++|+|++|+|+.+|+++..|++
T Consensus 1 ~~a~~~~~--~-~~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~-~~~~~~~~g~~~~G~V~~~g~~v~~~~~ 76 (343)
T cd08236 1 MKALVLTG--P-GDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG-AYHPPLVLGHEFSGTVEEVGSGVDDLAV 76 (343)
T ss_pred CeeEEEec--C-CceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCC-CCCCCcccCcceEEEEEEECCCCCcCCC
Confidence 34555532 2 478999999999999999999999999999999888765 3445788999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
||+|++.+.. .|+.|.+|..++++.|+... +.| ....|+|++|+.++++.++++|+++++++++++ ..+.+
T Consensus 77 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~t 147 (343)
T cd08236 77 GDRVAVNPLL-PCGKCEYCKKGEYSLCSNYD--YIG-----SRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAV 147 (343)
T ss_pred CCEEEEcCCC-CCCCChhHHCcChhhCCCcc--eEe-----cccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHH
Confidence 9999875544 78999999999999998742 222 235799999999999999999999999998887 57789
Q ss_pred hhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHH--HHHhc-
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAM--QMQAG- 245 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~~- 245 (360)
||+++.. .. ++++++++|+|+|.+|++++|+|+.+|++ |+++++++++.+.+++ +|++.++++++.. .+...
T Consensus 148 a~~~l~~-~~--~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~~ 223 (343)
T cd08236 148 ALHAVRL-AG--ITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARE-LGADDTINPKEEDVEKVRELT 223 (343)
T ss_pred HHHHHHh-cC--CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-cCCCEEecCccccHHHHHHHh
Confidence 9999864 34 44999999998899999999999999997 9999999999888877 9998888776543 22222
Q ss_pred -CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcc---cChhhHhccCcEEEEeecCC-----HHHHHHHHHH
Q 018158 246 -KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFE---LPSFPLIFGKRSVKGSMTGG-----MRETQEMMNV 316 (360)
Q Consensus 246 -~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~ 316 (360)
++++|++|||+|....+..++++++++|+++.+|....... .....++.++.++.++.... .+.++.++++
T Consensus 224 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (343)
T cd08236 224 EGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDL 303 (343)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHH
Confidence 45699999999876677899999999999999996654322 23334557788888776543 4567888899
Q ss_pred HhcCCCc--cce-EEECCccHHHHHHHHHc-CCCceeEEE
Q 018158 317 CGKYNIT--CNI-EVIKPDQINEALDRLAR-NDVRYRFVI 352 (360)
Q Consensus 317 l~~~~l~--~~i-~~~~~~~~~~a~~~~~~-~~~~gkvvi 352 (360)
+.++.+. +.+ +.+++++++++++.+.+ ++..||+|+
T Consensus 304 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 304 LASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred HHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 9999885 334 89999999999999998 666788874
|
This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast |
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=293.14 Aligned_cols=260 Identities=23% Similarity=0.321 Sum_probs=217.7
Q ss_pred ccccccceEEEEecCCCC------CCCCCCEEEeccCccCCCCChhhhCCCCCCccccccccccccc--CCCccccceee
Q 018158 68 VPGHEITGIITKVGSNVK------NFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFW--DGSITYGGYSE 139 (360)
Q Consensus 68 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~--~~~~~~g~~~~ 139 (360)
++|||++|+|+++|++|+ +|++||||++.+. .+|+.|.+|+.|.++.|.+..+ .|... .+...+|+|+|
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~-~~cg~C~~C~~g~~~~C~~~~~--~g~~~~~~~~~~~G~~ae 77 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVT-VPCGRCFRCRRGLPQKCDSLRK--YGHEALDSGWPLSGGYAE 77 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCC-CCCCCChhhhCcCcccCCChhh--cCcccccCCcccccccee
Confidence 579999999999999999 8999999987654 4799999999999999987432 12211 11235799999
Q ss_pred EEEeecc-eeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCC
Q 018158 140 MLVADYR-FVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTS 217 (360)
Q Consensus 140 ~~~v~~~-~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~ 217 (360)
|+.++++ +++++|+++++++++++++.+.|+|++++... ..++++|+|+|+|++|++++|+||.+|++ |++++++
T Consensus 78 y~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~---~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~ 154 (280)
T TIGR03366 78 HCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAG---DLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPS 154 (280)
T ss_pred eEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhcc---CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 9999997 79999999999999999999999999997765 34899999999999999999999999996 9999989
Q ss_pred hhHHHHHHHHcCCCeEeeCccHH-HHHh--cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC--CCcccChhhH
Q 018158 218 PSKEKEAKELLGADEFILSTNAM-QMQA--GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE--APFELPSFPL 292 (360)
Q Consensus 218 ~~~~~~~~~~~g~~~~v~~~~~~-~~~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~ 292 (360)
++|++.+++ +|++++++..+.. .... .+.++|++||++|....+..++++++++|+++.+|... ...+++...+
T Consensus 155 ~~r~~~a~~-~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~ 233 (280)
T TIGR03366 155 PDRRELALS-FGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQV 233 (280)
T ss_pred HHHHHHHHH-cCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHH
Confidence 999999988 9999988865532 1222 24679999999998878899999999999999999753 3456777888
Q ss_pred hccCcEEEEeecCCHHHHHHHHHHHhcC--CCc--cce-EEECCccH
Q 018158 293 IFGKRSVKGSMTGGMRETQEMMNVCGKY--NIT--CNI-EVIKPDQI 334 (360)
Q Consensus 293 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~--~l~--~~i-~~~~~~~~ 334 (360)
+.+++++.++.....++++++++++.++ ++. +.+ ++|+++++
T Consensus 234 ~~~~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 234 VRRWLTIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred HhCCcEEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 8999999999888888999999999974 443 345 88999874
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-39 Score=295.88 Aligned_cols=294 Identities=14% Similarity=0.128 Sum_probs=228.6
Q ss_pred CCCceEEEEeCCCC-CCCeEEEEEeeeecccchhhhhccCC---CCCCCCCccccccceEEEEecCCCCCCCCCCEEEec
Q 018158 21 SGKITPYIFKRREN-GVNDVTIKILYCGICHTDIHHVKNDW---GITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96 (360)
Q Consensus 21 ~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 96 (360)
++.+++++.+.|+| ++|||||||++++||+.|........ ....+|.++|||++|+|+++|+++++|++||+|++
T Consensus 20 ~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~- 98 (345)
T cd08293 20 AENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTS- 98 (345)
T ss_pred ccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEe-
Confidence 45788999999987 49999999999999999964332111 12346788999999999999999999999999974
Q ss_pred cCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccc----cccccchhhhhhc
Q 018158 97 CLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDA----AAPLLCAGITVFC 172 (360)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~----aa~l~~~~~ta~~ 172 (360)
..++|+||+.++++.++++|+++++.+ +++++.++.|||+
T Consensus 99 ------------------------------------~~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~ 142 (345)
T cd08293 99 ------------------------------------FNWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALI 142 (345)
T ss_pred ------------------------------------cCCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHH
Confidence 125799999999999999999864432 4567788999999
Q ss_pred hhhccCCCCCCCC--cEEEEEcC-ChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---HHhc
Q 018158 173 PMKDNNLIDSPAK--KRIGIVGL-GGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQ---MQAG 245 (360)
Q Consensus 173 ~l~~~~~~~~~~~--~~vlI~Ga-g~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~ 245 (360)
++.....++ +| ++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.+++.+|+++++++.+.+. ....
T Consensus 143 al~~~~~~~--~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~ 220 (345)
T cd08293 143 GIQEKGHIT--PGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLREL 220 (345)
T ss_pred HHHHhccCC--CCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHH
Confidence 997666554 66 99999999 9999999999999999 79999999999998877699999998776422 2222
Q ss_pred -CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC---Ccc----cCh--hhH-hccCcEEEEeecC-C----HHH
Q 018158 246 -KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA---PFE----LPS--FPL-IFGKRSVKGSMTG-G----MRE 309 (360)
Q Consensus 246 -~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~----~~~--~~~-~~~~~~i~~~~~~-~----~~~ 309 (360)
++++|++||++|+. .+..++++++++|+++.+|.... ... ... ..+ ..+++........ . .+.
T Consensus 221 ~~~gvd~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (345)
T cd08293 221 CPEGVDVYFDNVGGE-ISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEA 299 (345)
T ss_pred CCCCceEEEECCCcH-HHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHH
Confidence 46899999999986 46899999999999999985321 111 111 111 1233333332211 1 234
Q ss_pred HHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 310 TQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 310 ~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
++++++++.++.+++.. ..++++++++|++.+.+++..||+|+++
T Consensus 300 ~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 300 IAQLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred HHHHHHHHHCCCccceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 67778899999998765 5679999999999999999889999875
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=291.31 Aligned_cols=297 Identities=14% Similarity=0.131 Sum_probs=239.2
Q ss_pred cceeEEec-c-CCC--CCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCC
Q 018158 10 QSVVGWAA-H-DPS--GKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVK 85 (360)
Q Consensus 10 ~~~~~~~~-~-~~~--~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~ 85 (360)
|++.++.. + +.+ ..+++++.+.|+|+++||+|||++++||+.|.....+ ...+|.++|+|++|+|++ .++
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~~ 76 (329)
T cd08294 3 AKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KNS 76 (329)
T ss_pred ceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CCC
Confidence 55555555 2 333 6799999999999999999999999999987653221 124578999999999985 456
Q ss_pred CCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecc---eeEECCCCCCc-----
Q 018158 86 NFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYR---FVVHVPENIAM----- 157 (360)
Q Consensus 86 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~---~~~~iP~~~~~----- 157 (360)
.|++||+|+. .++|++|+.++.+ .++++|+++++
T Consensus 77 ~~~~Gd~V~~--------------------------------------~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~ 118 (329)
T cd08294 77 KFPVGTIVVA--------------------------------------SFGWRTHTVSDGKDQPDLYKLPADLPDDLPPS 118 (329)
T ss_pred CCCCCCEEEe--------------------------------------eCCeeeEEEECCccccceEECCccccccCChH
Confidence 7999999974 2578999999999 99999999982
Q ss_pred cccccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeC
Q 018158 158 DAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILS 236 (360)
Q Consensus 158 ~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~ 236 (360)
..++++++.+.|||+++.....++ +|+++||+|+ |++|++++|+|+.+|++|+++++++++.+.+++ +|+++++++
T Consensus 119 ~~~a~~~~~~~ta~~al~~~~~~~--~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~Ga~~vi~~ 195 (329)
T cd08294 119 LALGVLGMPGLTAYFGLLEICKPK--AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-LGFDAVFNY 195 (329)
T ss_pred HHHHhcccHHHHHHHHHHHhcCCC--CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCEEEeC
Confidence 223468889999999997766655 9999999998 999999999999999999999999999999999 999999988
Q ss_pred ccHHHH---Hh-cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC--C--c---ccChhhHhccCcEEEEeecC
Q 018158 237 TNAMQM---QA-GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA--P--F---ELPSFPLIFGKRSVKGSMTG 305 (360)
Q Consensus 237 ~~~~~~---~~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~--~---~~~~~~~~~~~~~i~~~~~~ 305 (360)
.+.+.. .. .++++|++||++|+. .+..++++++++|+++.+|.... . . ......+..+++++.++...
T Consensus 196 ~~~~~~~~v~~~~~~gvd~vld~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 274 (329)
T cd08294 196 KTVSLEEALKEAAPDGIDCYFDNVGGE-FSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVY 274 (329)
T ss_pred CCccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhh
Confidence 764322 22 256899999999985 67999999999999999985421 1 1 12233567788888887653
Q ss_pred CH-----HHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 306 GM-----RETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 306 ~~-----~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
.. +.++.+++++.++++++.. ..|+++++++|++.+++++..||+|+++
T Consensus 275 ~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 275 RWQDRWPEALKQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred hhHHHHHHHHHHHHHHHHCCCCcCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 32 3366788899999998754 7899999999999999999999999874
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >TIGR00692 tdh L-threonine 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=287.64 Aligned_cols=322 Identities=21% Similarity=0.277 Sum_probs=259.1
Q ss_pred cCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCC---CCCCCCCccccccceEEEEecCCCCCCCCCCEEE
Q 018158 18 HDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDW---GITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94 (360)
Q Consensus 18 ~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~ 94 (360)
..+...+++++.|.|+|+++||+||+.++++|++|+..+.+.. ....+|.++|+|++|+|+++|++++.|++||+|+
T Consensus 5 ~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 84 (340)
T TIGR00692 5 TKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS 84 (340)
T ss_pred ccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence 3566789999999999999999999999999999998765532 1223566899999999999999999999999998
Q ss_pred eccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchh
Q 018158 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPM 174 (360)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l 174 (360)
+.+ ...|+.|..|..+.+++|...++ .|. ...|+|++|+.++++.++++|+++++++ ++++..+.+|++++
T Consensus 85 ~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~-----~~~g~~~~~~~~~~~~~~~lp~~~~~~~-a~~~~~~~~a~~~~ 155 (340)
T TIGR00692 85 VET-HIVCGKCYACRRGQYHVCQNTKI--FGV-----DTDGCFAEYAVVPAQNIWKNPKSIPPEY-ATIQEPLGNAVHTV 155 (340)
T ss_pred ECC-cCCCCCChhhhCcChhhCcCcce--Eee-----cCCCcceeEEEeehHHcEECcCCCChHh-hhhcchHHHHHHHH
Confidence 754 45899999999999999998532 121 2568999999999999999999999865 45777888888876
Q ss_pred hccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHHH---HHhc--CCC
Q 018158 175 KDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAMQ---MQAG--KRT 248 (360)
Q Consensus 175 ~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~--~~~ 248 (360)
. .... +|++++|.|+|++|++++|+|+.+|++ |+++++++++.+.+++ +|++.++++.+.+. .... +++
T Consensus 156 ~--~~~~--~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~v~~~~~~~~~~l~~~~~~~~ 230 (340)
T TIGR00692 156 L--AGPI--SGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKK-MGATYVVNPFKEDVVKEVADLTDGEG 230 (340)
T ss_pred H--ccCC--CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hCCcEEEcccccCHHHHHHHhcCCCC
Confidence 2 2333 899999987799999999999999996 8888888888888877 99988887654322 2222 467
Q ss_pred cCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChh-hHhccCcEEEEeecC-CHHHHHHHHHHHhcCCCc--c
Q 018158 249 LDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSF-PLIFGKRSVKGSMTG-GMRETQEMMNVCGKYNIT--C 324 (360)
Q Consensus 249 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~~~~~~-~~~~~~~~~~~l~~~~l~--~ 324 (360)
+|+++|++|....+...+++++++|+++.+|........+.. .++.+++++.+.... ..+.+..+++++.++.++ +
T Consensus 231 ~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 310 (340)
T TIGR00692 231 VDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDP 310 (340)
T ss_pred CCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHH
Confidence 999999998766788999999999999999976443333333 456677777765432 235578888999999986 3
Q ss_pred ce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 325 NI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 325 ~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
.+ +.+++++++++++.+.+++. ||+|+++
T Consensus 311 ~~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~ 340 (340)
T TIGR00692 311 IITHKFKFDKFEKGFELMRSGQT-GKVILSL 340 (340)
T ss_pred heeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence 34 89999999999999998875 9999875
|
E. coli His-90 modulates substrate specificity and is believed part of the active site. |
| >TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-38 Score=289.02 Aligned_cols=304 Identities=19% Similarity=0.287 Sum_probs=245.1
Q ss_pred eeEEecc---CCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCC
Q 018158 12 VVGWAAH---DPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 12 ~~~~~~~---~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|+++..+ +++..+++.++|.|+|+++||+|||+++++|++|+.++.|..+...+|.++|+|++|+|+++|++++.|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 81 (336)
T TIGR02817 2 AVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLFK 81 (336)
T ss_pred ceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCCC
Confidence 4455554 6678999999999999999999999999999999998888664455678899999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|+.... ....|+|++|+.++.+.++++|+++++++++.+++.+.
T Consensus 82 ~Gd~V~~~~~--------------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ 129 (336)
T TIGR02817 82 PGDEVWYAGD--------------------------------IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSI 129 (336)
T ss_pred CCCEEEEcCC--------------------------------CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHH
Confidence 9999985210 02358999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCC-----CcEEEEEcC-ChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHcCCCeEeeCccH--
Q 018158 169 TVFCPMKDNNLIDSPA-----KKRIGIVGL-GGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKELLGADEFILSTNA-- 239 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~-----~~~vlI~Ga-g~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~-- 239 (360)
|||+++....+++ + |++++|+|+ |++|++++|+|+.+ |++|+++++++++.+.+++ +|+++++++...
T Consensus 130 ta~~~l~~~~~~~--~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~-~g~~~~~~~~~~~~ 206 (336)
T TIGR02817 130 TAWELLFDRLGIN--DPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLE-LGAHHVIDHSKPLK 206 (336)
T ss_pred HHHHHHHHhcCCC--CCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHH-cCCCEEEECCCCHH
Confidence 9999987666554 5 999999998 99999999999998 9999999999999999987 999999875442
Q ss_pred HHHHhc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecC------C------
Q 018158 240 MQMQAG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTG------G------ 306 (360)
Q Consensus 240 ~~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~------~------ 306 (360)
..+... ++++|+++|+++........+++++++|+++.++.. ..++...+..++.++.+.... .
T Consensus 207 ~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (336)
T TIGR02817 207 AQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDP---AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQ 283 (336)
T ss_pred HHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEccc---ccccchhhhhcceEEEEEEeecccccchhhhhhh
Confidence 122222 467999999987655688999999999999988532 223333344444554432211 0
Q ss_pred HHHHHHHHHHHhcCCCccce-EEE---CCccHHHHHHHHHcCCCceeEEEe
Q 018158 307 MRETQEMMNVCGKYNITCNI-EVI---KPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 307 ~~~~~~~~~~l~~~~l~~~i-~~~---~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
...++++++++.++.+++.+ +.+ +++++++|++.+.+++..||+++.
T Consensus 284 ~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 284 HHLLNRVARLVDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred HHHHHHHHHHHHCCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 13467888999999987654 555 468999999999999988999874
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model. |
| >cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=281.88 Aligned_cols=289 Identities=26% Similarity=0.397 Sum_probs=243.9
Q ss_pred CCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCc
Q 018158 20 PSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLA 99 (360)
Q Consensus 20 ~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 99 (360)
.++.+++++++.|++++++|+||+.++++|++|.+...|.+.....|.++|+|++|+|+++|++++.|++||+|++.+..
T Consensus 10 ~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 89 (306)
T cd08258 10 GPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTF 89 (306)
T ss_pred CCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCCCEEEEccCc
Confidence 34679999999999999999999999999999999888876444557889999999999999999999999999998878
Q ss_pred cCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCC
Q 018158 100 AACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNL 179 (360)
Q Consensus 100 ~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~ 179 (360)
..|+.|++|..+.++.|..... .| ....|+|++|+.++.+.++++|+++++++++ ++..+.+||+++.....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~~~~~ 161 (306)
T cd08258 90 STCGRCPYCRRGDYNLCPHRKG--IG-----TQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVAERSG 161 (306)
T ss_pred CCCCCCcchhCcCcccCCCCce--ee-----ecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHHHhcC
Confidence 8999999999999999986421 12 2456999999999999999999999999876 77788899999877766
Q ss_pred CCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEe--CChhHHHHHHHHcCCCeEeeCccHHH---HHh--cCCCcCEE
Q 018158 180 IDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVIS--TSPSKEKEAKELLGADEFILSTNAMQ---MQA--GKRTLDFI 252 (360)
Q Consensus 180 ~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~--~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~--~~~~~d~v 252 (360)
+. ++++++|.|+|.+|++++|+|+.+|++|++++ ++.++.+.+++ +|++++ ++...+. ... .++++|++
T Consensus 162 ~~--~g~~vlI~g~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~l~~~~~~~~vd~v 237 (306)
T cd08258 162 IR--PGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKE-LGADAV-NGGEEDLAELVNEITDGDGADVV 237 (306)
T ss_pred CC--CCCEEEEECCCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHH-hCCccc-CCCcCCHHHHHHHHcCCCCCCEE
Confidence 55 99999998779999999999999999988774 34556777777 998877 6654322 221 14679999
Q ss_pred EEcCCCcccHHHHHHHhccCCEEEEeCCCC-CCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcC
Q 018158 253 LDTVSAKHSLGPILELLKVNGTLSVVGAPE-APFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKY 320 (360)
Q Consensus 253 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~ 320 (360)
||++|....+...+++++++|+++.+|... ....++...++.+++++.|+..+..++++++++++++|
T Consensus 238 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 306 (306)
T cd08258 238 IECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTPASWETALRLLASG 306 (306)
T ss_pred EECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCchHhHHHHHHHHhcC
Confidence 999987667889999999999999999865 24556677788899999999999999999999999875
|
This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous |
| >cd05281 TDH Threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=284.13 Aligned_cols=322 Identities=21% Similarity=0.289 Sum_probs=256.9
Q ss_pred cCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCC---CCCCCCCccccccceEEEEecCCCCCCCCCCEEE
Q 018158 18 HDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDW---GITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94 (360)
Q Consensus 18 ~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~ 94 (360)
..+...+++.+.+.|+|.++|++||++++++|+.|+..+.+.. +....|.++|||++|+|+.+|+++..|++||+|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~ 86 (341)
T cd05281 7 TKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKVGDYVS 86 (341)
T ss_pred ecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCCCCCEEE
Confidence 4444579999999999999999999999999999998755421 1234567899999999999999999999999998
Q ss_pred eccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchh
Q 018158 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPM 174 (360)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l 174 (360)
+.+.. +|+.|.+|..+.+++|... ++.|. ...|+|++|+.++.+.++++|++++.++ ++++..+.++++++
T Consensus 87 ~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~g~~~~~v~v~~~~~~~lP~~~~~~~-a~~~~~~~~a~~~~ 157 (341)
T cd05281 87 AETHI-VCGKCYQCRTGNYHVCQNT--KILGV-----DTDGCFAEYVVVPEENLWKNDKDIPPEI-ASIQEPLGNAVHTV 157 (341)
T ss_pred ECCcc-CCCCChHHHCcCcccCccc--ceEec-----cCCCcceEEEEechHHcEECcCCCCHHH-hhhhhHHHHHHHHH
Confidence 87544 8999999999999999753 34442 3568999999999999999999999854 45666777778776
Q ss_pred hccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHH--HHhc--CCCc
Q 018158 175 KDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQ--MQAG--KRTL 249 (360)
Q Consensus 175 ~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~--~~~~--~~~~ 249 (360)
.. . ..++++++|.|+|.+|++++|+|+.+|+ +|+++++++++.+.+++ +|.++++++.+.+. .... ++++
T Consensus 158 ~~--~--~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~v 232 (341)
T cd05281 158 LA--G--DVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKK-MGADVVINPREEDVVEVKSVTDGTGV 232 (341)
T ss_pred Hh--c--CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hCcceeeCcccccHHHHHHHcCCCCC
Confidence 52 2 3489999998889999999999999999 69999888888888887 99988887654322 1211 4689
Q ss_pred CEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChh-hHhccCcEEEEeecCC-HHHHHHHHHHHhcCCCc--cc
Q 018158 250 DFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSF-PLIFGKRSVKGSMTGG-MRETQEMMNVCGKYNIT--CN 325 (360)
Q Consensus 250 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~~~~~~~-~~~~~~~~~~l~~~~l~--~~ 325 (360)
|++||++|.......++++++++|+++.+|........... .+..+++.+.+..... .+.+..+++++.++.+. +.
T Consensus 233 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 312 (341)
T cd05281 233 DVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPV 312 (341)
T ss_pred CEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCChhHh
Confidence 99999998876788999999999999999875543332322 3566777777765322 35677889999999885 33
Q ss_pred e-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 326 I-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 326 i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+ +.++++++++|++.+.+++ .||+|+++
T Consensus 313 ~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 313 ITHKLPLEDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred eEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence 4 7899999999999999998 89999864
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=283.02 Aligned_cols=306 Identities=20% Similarity=0.264 Sum_probs=250.1
Q ss_pred ccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCC
Q 018158 9 TQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 9 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
||+++++...+.++.+++++++.|+++++||+||+.++++|++|++...|.++....|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 58888887777888999999999999999999999999999999999888775445678899999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++.. ...|+|++|+.++.+.++++|+++++++++.+++.+.
T Consensus 81 ~Gd~V~~~~----------------------------------~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ 126 (327)
T PRK10754 81 VGDRVVYAQ----------------------------------SALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGL 126 (327)
T ss_pred CCCEEEECC----------------------------------CCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHH
Confidence 999997421 1348999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---Hh
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM---QA 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~ 244 (360)
+||.++.....++ +|++++|+|+ |.+|++++|+|+.+|++|+++++++++++.+++ +|++++++.++.+.. ..
T Consensus 127 ta~~~l~~~~~~~--~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~ 203 (327)
T PRK10754 127 TVYYLLRKTYEIK--PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKK-AGAWQVINYREENIVERVKE 203 (327)
T ss_pred HHHHHHHhhcCCC--CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-CCCCEEEcCCCCcHHHHHHH
Confidence 9999987766655 9999999987 999999999999999999999999999999977 999888876654222 22
Q ss_pred c--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCc-ccChhhHhccCc------EEEEeecCCHH----HHH
Q 018158 245 G--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPF-ELPSFPLIFGKR------SVKGSMTGGMR----ETQ 311 (360)
Q Consensus 245 ~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~------~i~~~~~~~~~----~~~ 311 (360)
. ++++|++|||+|.. .....+++++++|+++.+|...... .+....+..++. .+.+.. ...+ .+.
T Consensus 204 ~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 281 (327)
T PRK10754 204 ITGGKKVRVVYDSVGKD-TWEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYI-TTREELTEASN 281 (327)
T ss_pred HcCCCCeEEEEECCcHH-HHHHHHHHhccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeeccc-CCHHHHHHHHH
Confidence 2 56799999999875 5788999999999999998765321 222222222221 122221 1222 245
Q ss_pred HHHHHHhcCCCccc---eEEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 312 EMMNVCGKYNITCN---IEVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 312 ~~~~~l~~~~l~~~---i~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
.+++++.++.+++. ++.|++++++++++.+.+++..||+|+.
T Consensus 282 ~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 282 ELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred HHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 67889999998753 4899999999999999999989999985
|
|
| >cd08234 threonine_DH_like L-threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=279.23 Aligned_cols=316 Identities=26% Similarity=0.427 Sum_probs=260.8
Q ss_pred CCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCcc
Q 018158 21 SGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAA 100 (360)
Q Consensus 21 ~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 100 (360)
++++.+.+.+.|++.++||+||++++++|+.|+....|.++ ..+|.++|+|++|+|+++|++++.|++||+|++.+..
T Consensus 9 ~~~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~-~~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~V~~~~~~- 86 (334)
T cd08234 9 PGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFG-AAPPLVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNI- 86 (334)
T ss_pred CCceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCC-CCCCcccccceEEEEEEeCCCCCCCCCCCEEEEcCCc-
Confidence 35899999999999999999999999999999999888764 3377899999999999999999999999999876554
Q ss_pred CCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCC
Q 018158 101 ACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLI 180 (360)
Q Consensus 101 ~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~ 180 (360)
.|+.|.+|..++.++|.... +.| ....|+|++|+.++.+.++++|+++++.+++.+ ..+.++++++ ....+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~~~~~ 157 (334)
T cd08234 87 YCGECFYCRRGRPNLCENLT--AVG-----VTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-DLLGI 157 (334)
T ss_pred CCCCCccccCcChhhCCCcc--eec-----cCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-HhcCC
Confidence 59999999999999998642 111 125699999999999999999999999988766 7778888888 44454
Q ss_pred CCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---HhcCCCcCEEEEcC
Q 018158 181 DSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAMQM---QAGKRTLDFILDTV 256 (360)
Q Consensus 181 ~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~~~~~d~vid~~ 256 (360)
+ ++++++|+|+|.+|.+++++|+..|++ |+++++++++.+.+++ +|++.++++.+.+.. ...++++|++||++
T Consensus 158 ~--~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~vd~v~~~~ 234 (334)
T cd08234 158 K--PGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKK-LGATETVDPSREDPEAQKEDNPYGFDVVIEAT 234 (334)
T ss_pred C--CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hCCeEEecCCCCCHHHHHHhcCCCCcEEEECC
Confidence 4 999999998899999999999999997 8999999999998877 998888776554221 22357899999999
Q ss_pred CCcccHHHHHHHhccCCEEEEeCCCCC--CcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc---ceEEECC
Q 018158 257 SAKHSLGPILELLKVNGTLSVVGAPEA--PFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC---NIEVIKP 331 (360)
Q Consensus 257 g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~---~i~~~~~ 331 (360)
|....+..++++++++|+++.+|.... ...+....+..+++++.++... ...++.+++++.++++.+ ..+.|++
T Consensus 235 ~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 313 (334)
T cd08234 235 GVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN-PYTFPRAIALLESGKIDVKGLVSHRLPL 313 (334)
T ss_pred CChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC-HHHHHHHHHHHHcCCCChhhhEEEEecH
Confidence 876677899999999999999987543 3344444455577888776543 456888999999999864 2378999
Q ss_pred ccHHHHHHHHHcCCCceeEEE
Q 018158 332 DQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 332 ~~~~~a~~~~~~~~~~gkvvi 352 (360)
+++++|++.+.+ ...||+++
T Consensus 314 ~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 314 EEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred HHHHHHHHHHhc-CCceEEEe
Confidence 999999999998 67789886
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >cd08290 ETR 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-37 Score=283.47 Aligned_cols=307 Identities=20% Similarity=0.287 Sum_probs=249.5
Q ss_pred cceeEEeccCCC-CCceEEEEeCCCCCC-CeEEEEEeeeecccchhhhhccCCCCC-C----CCCccccccceEEEEecC
Q 018158 10 QSVVGWAAHDPS-GKITPYIFKRRENGV-NDVTIKILYCGICHTDIHHVKNDWGIT-M----YPVVPGHEITGIITKVGS 82 (360)
Q Consensus 10 ~~~~~~~~~~~~-~~l~~~~~~~p~~~~-~evlVkv~~~~i~~~D~~~~~g~~~~~-~----~p~~~G~e~~G~V~~vG~ 82 (360)
|+|.++...+.+ ..+.+++.|.|+|.+ ++|+||+.++++|++|+..+.|..+.. . .|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 455555433322 258999999999887 999999999999999999988865322 2 567899999999999999
Q ss_pred CCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCcccccc
Q 018158 83 NVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAP 162 (360)
Q Consensus 83 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~ 162 (360)
+++.|++||+|++.. ...|+|++|+.++.+.++++|+++++++++.
T Consensus 81 ~v~~~~~Gd~V~~~~----------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~ 126 (341)
T cd08290 81 GVKSLKPGDWVIPLR----------------------------------PGLGTWRTHAVVPADDLIKVPNDVDPEQAAT 126 (341)
T ss_pred CCCCCCCCCEEEecC----------------------------------CCCccchheEeccHHHeEeCCCCCCHHHHHH
Confidence 999999999998632 1249999999999999999999999999999
Q ss_pred ccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCh----hHHHHHHHHcCCCeEeeCc
Q 018158 163 LLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSP----SKEKEAKELLGADEFILST 237 (360)
Q Consensus 163 l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~----~~~~~~~~~~g~~~~v~~~ 237 (360)
+++.+.|||+++.....++ ++++++|+|+ |++|++++|+|+..|++|+++++++ ++++.+++ +|+++++++.
T Consensus 127 ~~~~~~ta~~~l~~~~~~~--~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~ 203 (341)
T cd08290 127 LSVNPCTAYRLLEDFVKLQ--PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKA-LGADHVLTEE 203 (341)
T ss_pred hhccHHHHHHHHHhhcccC--CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHh-cCCCEEEeCc
Confidence 9999999999997766655 9999999998 9999999999999999998888776 66788877 9999998876
Q ss_pred cH---HH---HHhc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeecCCH--
Q 018158 238 NA---MQ---MQAG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTGGM-- 307 (360)
Q Consensus 238 ~~---~~---~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~~-- 307 (360)
+. .. .... .+++|++|||+|.. .+...+++++++|+++.+|.... ...++...++.++.++.+......
T Consensus 204 ~~~~~~~~~~i~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (341)
T cd08290 204 ELRSLLATELLKSAPGGRPKLALNCVGGK-SATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLK 282 (341)
T ss_pred ccccccHHHHHHHHcCCCceEEEECcCcH-hHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHh
Confidence 53 22 1111 22799999999986 46788999999999999986432 334455456778888888765321
Q ss_pred --------HHHHHHHHHHhcCCCccce-EEE---CCccHHHHHHHHHcCCCceeEEEec
Q 018158 308 --------RETQEMMNVCGKYNITCNI-EVI---KPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 308 --------~~~~~~~~~l~~~~l~~~i-~~~---~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
..+..+++++.++.+.+.. +.+ +++++++|++.+.+++..||+|+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 283 RANPEEKEDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred hcCHHHHHHHHHHHHHHHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 2467788899999987654 677 9999999999999998889999874
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f |
| >cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=278.29 Aligned_cols=312 Identities=22% Similarity=0.285 Sum_probs=246.0
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC-CCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|+|.++...++..++++++.|.|.++++||+||+.++++|++|+..+.|.++. ..+|.++|||++|+|+++ +++.|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 45566655554458999999999999999999999999999999998886532 335778999999999999 457899
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++.+. + .|...+|+|++|+.++.+.++++|+++++++++.+++.+.
T Consensus 79 ~Gd~V~~~~~------------------------~-----~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ 129 (325)
T cd05280 79 EGDEVLVTGY------------------------D-----LGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGF 129 (325)
T ss_pred CCCEEEEccc------------------------c-----cCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHH
Confidence 9999986321 0 1113469999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCC-CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH--HHHh
Q 018158 169 TVFCPMKDNNLIDSPA-KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM--QMQA 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~-~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~ 244 (360)
+||+++..+.+..+.+ +++++|+|+ |++|++++|+|+.+|++|+++++++++++.+++ +|++++++.++.. ....
T Consensus 130 ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~ 208 (325)
T cd05280 130 TAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKS-LGASEVLDREDLLDESKKP 208 (325)
T ss_pred HHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCcEEEcchhHHHHHHHH
Confidence 9999987655432233 579999999 999999999999999999999999999999987 9999888776532 1111
Q ss_pred -cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeecCC--H----HHHHHHHHH
Q 018158 245 -GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTGG--M----RETQEMMNV 316 (360)
Q Consensus 245 -~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~--~----~~~~~~~~~ 316 (360)
..+++|++||++|.. .+..++++++++|+++.+|.... ...+....++.++.++.+..... . +.++.+.++
T Consensus 209 ~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (325)
T cd05280 209 LLKARWAGAIDTVGGD-VLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATE 287 (325)
T ss_pred hcCCCccEEEECCchH-HHHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHH
Confidence 245799999999985 67999999999999999987542 22344444556888888765432 1 223344444
Q ss_pred HhcCCCccceEEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 317 CGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 317 l~~~~l~~~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+..+.....+++|+++++++|++.+.+++..||+|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 288 WKPDLLEIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred HhcCCccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 55554344458999999999999999999999999864
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so |
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=276.87 Aligned_cols=307 Identities=20% Similarity=0.225 Sum_probs=249.7
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC---CCCCCCccccccceEEEEecCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG---ITMYPVVPGHEITGIITKVGSNVKN 86 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~ 86 (360)
|++..+...+....+.+.+.+.|.+.+++|+|++.++++|++|++...|..+ ....|.++|||++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 3555554334456788888887778999999999999999999998877542 2345678999999999999999999
Q ss_pred CCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccch
Q 018158 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCA 166 (360)
Q Consensus 87 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~ 166 (360)
|++||+|++... ...|+|++|+.++.+.++++|+++++++++.+++.
T Consensus 81 ~~~Gd~V~~~~~---------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~ 127 (324)
T cd08244 81 AWLGRRVVAHTG---------------------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHD 127 (324)
T ss_pred CCCCCEEEEccC---------------------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcch
Confidence 999999986310 13699999999999999999999999999999999
Q ss_pred hhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---
Q 018158 167 GITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM--- 242 (360)
Q Consensus 167 ~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~--- 242 (360)
+.|||..+ ....++ ++++++|+|+ |++|++++++|+.+|++|+++++++++.+.+++ +|+++++++.+.+..
T Consensus 128 ~~ta~~~~-~~~~~~--~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~ 203 (324)
T cd08244 128 GRTALGLL-DLATLT--PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRA-LGADVAVDYTRPDWPDQV 203 (324)
T ss_pred HHHHHHHH-HhcCCC--CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCCEEEecCCccHHHHH
Confidence 99996544 444444 9999999997 999999999999999999999999999999977 999888877654222
Q ss_pred Hhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-cccChhhHhccCcEEEEeecCC------HHHHHHH
Q 018158 243 QAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-FELPSFPLIFGKRSVKGSMTGG------MRETQEM 313 (360)
Q Consensus 243 ~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~ 313 (360)
... ++++|+++|++|... ...++++++.+|+++.+|..... ..++...++.++.++.++.... .+.++.+
T Consensus 204 ~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (324)
T cd08244 204 REALGGGGVTVVLDGVGGAI-GRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARA 282 (324)
T ss_pred HHHcCCCCceEEEECCChHh-HHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHH
Confidence 211 467999999999874 58899999999999999876432 2444445567888888765533 2456778
Q ss_pred HHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 314 MNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 314 ~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
++++.++.+.+.+ +.|+++++++|++.+.++...||+++++
T Consensus 283 ~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 283 LAEAAAGRLVPVVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred HHHHHCCCccCccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 8899999887655 8999999999999999999899999864
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=278.62 Aligned_cols=310 Identities=22% Similarity=0.267 Sum_probs=256.4
Q ss_pred ccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCC
Q 018158 9 TQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNF 87 (360)
Q Consensus 9 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~ 87 (360)
||||.++...+....+.+++.+.|++.++||+||+.++++|+.|+....|.++ ....|.++|||++|+|+++|++++.+
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 47888776666556788888888889999999999999999999998887653 23446789999999999999999999
Q ss_pred CCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchh
Q 018158 88 KVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAG 167 (360)
Q Consensus 88 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~ 167 (360)
++||+|+.. ..+|+|++|+.++.+.++++|+++++.+++.+++.+
T Consensus 81 ~~Gd~V~~~-----------------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~ 125 (334)
T PTZ00354 81 KEGDRVMAL-----------------------------------LPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAF 125 (334)
T ss_pred CCCCEEEEe-----------------------------------cCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHH
Confidence 999999752 135899999999999999999999999999999999
Q ss_pred hhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH-HH---
Q 018158 168 ITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM-QM--- 242 (360)
Q Consensus 168 ~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~-~~--- 242 (360)
.+||+++......+ ++++++|+|+ |++|++++++|+.+|++++++.+++++++.+++ +|.+++++....+ ..
T Consensus 126 ~ta~~~l~~~~~~~--~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~ 202 (334)
T PTZ00354 126 LTAWQLLKKHGDVK--KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCKK-LAAIILIRYPDEEGFAPKV 202 (334)
T ss_pred HHHHHHHHHhcCCC--CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcEEEecCChhHHHHHH
Confidence 99999998766655 9999999998 999999999999999998889999999999977 9998888876543 22
Q ss_pred Hhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-Ccc-cChhhHhccCcEEEEeecCCH----------H
Q 018158 243 QAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFE-LPSFPLIFGKRSVKGSMTGGM----------R 308 (360)
Q Consensus 243 ~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~-~~~~~~~~~~~~i~~~~~~~~----------~ 308 (360)
... ++++|++||+.+.. .+..++++++++|+++.+|...+ ... +....+..+..++.++..... +
T Consensus 203 ~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (334)
T PTZ00354 203 KKLTGEKGVNLVLDCVGGS-YLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVAS 281 (334)
T ss_pred HHHhCCCCceEEEECCchH-HHHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHH
Confidence 111 46799999999865 67899999999999999986542 222 555556667778887654331 2
Q ss_pred HHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEecCCC
Q 018158 309 ETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDIAGG 357 (360)
Q Consensus 309 ~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~ 357 (360)
.++.+++++.++.+.+.+ +.+++++++++++.+.+++..||+++++.++
T Consensus 282 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~~ 331 (334)
T PTZ00354 282 FEREVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNEP 331 (334)
T ss_pred HHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHhCCCCceEEEecCCC
Confidence 246677888899887655 8999999999999999888889999988664
|
|
| >cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=274.84 Aligned_cols=295 Identities=19% Similarity=0.317 Sum_probs=245.7
Q ss_pred ceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCC
Q 018158 11 SVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVG 90 (360)
Q Consensus 11 ~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 90 (360)
|+.++.-.+ +..+++++.+.|.++++||+||+.++++|+.|++...+. ..+.++|||++|+|+++|+.++.|++|
T Consensus 2 ~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~G 76 (305)
T cd08270 2 RALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAVG 76 (305)
T ss_pred eEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCCC
Confidence 444453333 567888899999999999999999999999999876532 236789999999999999999999999
Q ss_pred CEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhh
Q 018158 91 DRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITV 170 (360)
Q Consensus 91 d~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta 170 (360)
|+|++. ...|+|++|+.++.+.++++|+++++++++++++.+.+|
T Consensus 77 d~V~~~-----------------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta 121 (305)
T cd08270 77 ARVVGL-----------------------------------GAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTA 121 (305)
T ss_pred CEEEEe-----------------------------------cCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHH
Confidence 999852 125999999999999999999999999999999999999
Q ss_pred hchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCc
Q 018158 171 FCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTL 249 (360)
Q Consensus 171 ~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~ 249 (360)
|+++..... .+|++++|+|+ |++|++++++++..|++|+.+++++++++.+++ +|++..++.... . ..+++
T Consensus 122 ~~~~~~~~~---~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~--~--~~~~~ 193 (305)
T cd08270 122 LRALRRGGP---LLGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRE-LGAAEVVVGGSE--L--SGAPV 193 (305)
T ss_pred HHHHHHhCC---CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcEEEecccc--c--cCCCc
Confidence 999987763 26999999999 999999999999999999999999999999998 998766543321 1 23579
Q ss_pred CEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhc--cCcEEEEeecCC----HHHHHHHHHHHhcCCC
Q 018158 250 DFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIF--GKRSVKGSMTGG----MRETQEMMNVCGKYNI 322 (360)
Q Consensus 250 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~--~~~~i~~~~~~~----~~~~~~~~~~l~~~~l 322 (360)
|+++|++|.. .+..++++++.+|+++.+|.... ...++...+.. ++.++.++.... .+.+..+++++.++++
T Consensus 194 d~vl~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 272 (305)
T cd08270 194 DLVVDSVGGP-QLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRL 272 (305)
T ss_pred eEEEECCCcH-HHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCc
Confidence 9999999986 57899999999999999987542 22344444444 578888776653 3567888899999999
Q ss_pred ccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 323 TCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 323 ~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
++.+ +.++++++++|++.+.+++..||+++++
T Consensus 273 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 273 DPRIGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred cceeccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 8765 8999999999999999999889999875
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-36 Score=274.96 Aligned_cols=327 Identities=21% Similarity=0.273 Sum_probs=267.2
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|+|.++...+....+++++.+.|.++++|++|++.++++|++|++...|.++ ....|.++|||++|+|+++|+.+..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 4566665555557899988888889999999999999999999999887653 234577899999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++.... .|..+.+..|... .+.| ....|+|++|+.++.+.++++|+++++.+++.+++.+.
T Consensus 81 ~Gd~V~~~~~~-------~~~~~~~~~~~~~--~~~~-----~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ 146 (336)
T cd08276 81 VGDRVVPTFFP-------NWLDGPPTAEDEA--SALG-----GPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGL 146 (336)
T ss_pred CCCEEEEeccc-------ccccccccccccc--cccc-----cccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHH
Confidence 99999874432 2344444455321 1222 23478999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCcc-H---HHHHh
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN-A---MQMQA 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~-~---~~~~~ 244 (360)
+||+++.....+. +|++++|+|+|++|++++++++..|++|+++++++++++.+.+ +|.+++++... . .....
T Consensus 147 ~a~~~l~~~~~~~--~g~~vli~g~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 223 (336)
T cd08276 147 TAWNALFGLGPLK--PGDTVLVQGTGGVSLFALQFAKAAGARVIATSSSDEKLERAKA-LGADHVINYRTTPDWGEEVLK 223 (336)
T ss_pred HHHHHHHhhcCCC--CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCEEEcCCcccCHHHHHHH
Confidence 9999998776655 9999999977999999999999999999999999999999988 89988887655 2 11222
Q ss_pred c--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-cccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCC
Q 018158 245 G--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-FELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYN 321 (360)
Q Consensus 245 ~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~ 321 (360)
. ++++|+++|+++.. ....++++++++|+++.+|..... .......++.+++++.+........++++++++.++.
T Consensus 224 ~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 302 (336)
T cd08276 224 LTGGRGVDHVVEVGGPG-TLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHR 302 (336)
T ss_pred HcCCCCCcEEEECCChH-HHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcCC
Confidence 2 46899999999865 578999999999999999876532 2344556678899999988777778899999999888
Q ss_pred Cccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 322 ITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 322 l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+.+.. +.|++++++++++.+.+++..+|+++++
T Consensus 303 l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 303 IRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred cccccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 87654 8999999999999999988889999863
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-36 Score=274.98 Aligned_cols=310 Identities=23% Similarity=0.306 Sum_probs=247.1
Q ss_pred eeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC-CCCCCccccccceEEEEecCCCCCCCCC
Q 018158 12 VVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIITKVGSNVKNFKVG 90 (360)
Q Consensus 12 ~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~G 90 (360)
|.++..++++..++++++|.|.++++||+||++++++|++|++.+.|.++. ...|.++|||++|+|+. +++..|++|
T Consensus 2 a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~G 79 (323)
T TIGR02823 2 ALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFREG 79 (323)
T ss_pred eEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCCC
Confidence 455555676678999999999999999999999999999999998887632 34578899999999998 566789999
Q ss_pred CEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhh
Q 018158 91 DRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITV 170 (360)
Q Consensus 91 d~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta 170 (360)
|+|++.+.. .+....|++++|+.++.+.++++|+++++++++.+++.+.+|
T Consensus 80 d~V~~~~~~-----------------------------~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta 130 (323)
T TIGR02823 80 DEVIVTGYG-----------------------------LGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTA 130 (323)
T ss_pred CEEEEccCC-----------------------------CCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHH
Confidence 999863210 011246899999999999999999999999999999999999
Q ss_pred hchhhccCCCCCCCCc-EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH-HHhc-C
Q 018158 171 FCPMKDNNLIDSPAKK-RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ-MQAG-K 246 (360)
Q Consensus 171 ~~~l~~~~~~~~~~~~-~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~-~~~~-~ 246 (360)
|.++..+.+..+.+++ +++|+|+ |++|++++|+|+.+|++|+++++++++++.+++ +|++++++..+... .... .
T Consensus 131 ~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 209 (323)
T TIGR02823 131 ALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKE-LGASEVIDREDLSPPGKPLEK 209 (323)
T ss_pred HHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHh-cCCcEEEccccHHHHHHHhcC
Confidence 8887655432234888 9999999 999999999999999999999888888888877 99988887765432 2222 3
Q ss_pred CCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeecC--CH----HHHHHHHHHHhc
Q 018158 247 RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTG--GM----RETQEMMNVCGK 319 (360)
Q Consensus 247 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~--~~----~~~~~~~~~l~~ 319 (360)
.++|.++||+|.. .+..++++++++|+++.+|.... ........++.++.++.+.... .. +.+..+.+++..
T Consensus 210 ~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (323)
T TIGR02823 210 ERWAGAVDTVGGH-TLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKP 288 (323)
T ss_pred CCceEEEECccHH-HHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhc
Confidence 4599999999976 57899999999999999997642 2233334555788888876442 11 224555666777
Q ss_pred CCCccceEEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 320 YNITCNIEVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 320 ~~l~~~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+.+.+.++.|+++++++|++.+.+++..||+|+++
T Consensus 289 ~~~~~~~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 289 RNLESITREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred CCCcCceeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 87766568999999999999999999899999864
|
This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc. |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-36 Score=275.51 Aligned_cols=301 Identities=23% Similarity=0.323 Sum_probs=250.9
Q ss_pred cceeEEeccCC--CCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCC
Q 018158 10 QSVVGWAAHDP--SGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKN 86 (360)
Q Consensus 10 ~~~~~~~~~~~--~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~ 86 (360)
|+++++...++ ++.+++++.+.|.+.++||+||+.++++|++|++...|.+. ...+|.++|||++|+|+.+|++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~~ 81 (329)
T cd08250 2 FRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVTD 81 (329)
T ss_pred ceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCCC
Confidence 77888877777 88999999999999999999999999999999998888663 2457889999999999999999999
Q ss_pred CCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccch
Q 018158 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCA 166 (360)
Q Consensus 87 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~ 166 (360)
+++||+|++ ...|+|++|+.++.+.++++|++ ..+++.+++.
T Consensus 82 ~~~Gd~V~~------------------------------------~~~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~ 123 (329)
T cd08250 82 FKVGDAVAT------------------------------------MSFGAFAEYQVVPARHAVPVPEL--KPEVLPLLVS 123 (329)
T ss_pred CCCCCEEEE------------------------------------ecCcceeEEEEechHHeEECCCC--cchhhhcccH
Confidence 999999986 23589999999999999999997 3567889999
Q ss_pred hhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---H
Q 018158 167 GITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ---M 242 (360)
Q Consensus 167 ~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~ 242 (360)
+.+||+++.....++ ++++++|+|+ |.+|++++|+|+..|++|+++++++++.+.+++ +|++.+++..+.+. .
T Consensus 124 ~~ta~~~l~~~~~~~--~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~ 200 (329)
T cd08250 124 GLTASIALEEVGEMK--SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKS-LGCDRPINYKTEDLGEVL 200 (329)
T ss_pred HHHHHHHHHHhcCCC--CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHH-cCCceEEeCCCccHHHHH
Confidence 999999998776655 9999999998 999999999999999999999999999999977 99888877654322 1
Q ss_pred H-hcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-----------cccChhhHhccCcEEEEeecCC----
Q 018158 243 Q-AGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-----------FELPSFPLIFGKRSVKGSMTGG---- 306 (360)
Q Consensus 243 ~-~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~~~~~~~~i~~~~~~~---- 306 (360)
. ..++++|++||++|.. .+..++++++++|+++.+|..... ..++ ...+.++.++.++....
T Consensus 201 ~~~~~~~vd~v~~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 278 (329)
T cd08250 201 KKEYPKGVDVVYESVGGE-MFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLP-PKLLAKSASVRGFFLPHYAKL 278 (329)
T ss_pred HHhcCCCCeEEEECCcHH-HHHHHHHHhccCCeEEEEecccCCcccCccccccccccc-HHHhhcCceEEEEEhHHHHHH
Confidence 1 1256799999999874 678999999999999999875421 1111 23456778888876542
Q ss_pred -HHHHHHHHHHHhcCCCccc---eEEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 307 -MRETQEMMNVCGKYNITCN---IEVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 307 -~~~~~~~~~~l~~~~l~~~---i~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
.+.+.++++++.++.+.+. ++.++++++++|++.+.+++..||++++
T Consensus 279 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 279 IPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred HHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 3456788889999988763 2569999999999999998888899874
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=274.99 Aligned_cols=306 Identities=21% Similarity=0.263 Sum_probs=233.2
Q ss_pred ceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCC----CCCCccccccceEEEEecCC---
Q 018158 11 SVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGIT----MYPVVPGHEITGIITKVGSN--- 83 (360)
Q Consensus 11 ~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~----~~p~~~G~e~~G~V~~vG~~--- 83 (360)
........++......++.++|.|.+++++|++.++++|+.|+++..|.+.+. .+|.++++++.|++..+++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~ 86 (347)
T KOG1198|consen 7 RVSLVSPPGGGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDD 86 (347)
T ss_pred eEEEeccCCCcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccc
Confidence 33333334555555666799999999999999999999999999999987543 35655555555553333322
Q ss_pred -CCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCcccccc
Q 018158 84 -VKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAP 162 (360)
Q Consensus 84 -v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~ 162 (360)
+..+..||++.. ....|+|+||+++|+..++++|++++++++|+
T Consensus 87 ~~~~~~~g~~~~~-----------------------------------~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~ 131 (347)
T KOG1198|consen 87 VVGGWVHGDAVVA-----------------------------------FLSSGGLAEYVVVPEKLLVKIPESLSFEEAAA 131 (347)
T ss_pred cccceEeeeEEee-----------------------------------ccCCCceeeEEEcchhhccCCCCccChhhhhc
Confidence 233555554432 25679999999999999999999999999999
Q ss_pred ccchhhhhhchhhccC------CCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEee
Q 018158 163 LLCAGITVFCPMKDNN------LIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFIL 235 (360)
Q Consensus 163 l~~~~~ta~~~l~~~~------~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~ 235 (360)
+|.++.|||.++.... +.+ +|++|||+|+ |++|++++|+|+..|+..++++.++++.+++++ +|+++++|
T Consensus 132 ~p~~~~tA~~al~~~~~~~~~~~~~--~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~-lGAd~vvd 208 (347)
T KOG1198|consen 132 LPLAALTALSALFQLAPGKRSKKLS--KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKK-LGADEVVD 208 (347)
T ss_pred CchHHHHHHHHHHhccccccccccC--CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHH-cCCcEeec
Confidence 9999999999999888 765 9999999988 999999999999999655555558899999999 99999999
Q ss_pred CccHHHHHhc----CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC---CcccC-hh---------hHhccCcE
Q 018158 236 STNAMQMQAG----KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA---PFELP-SF---------PLIFGKRS 298 (360)
Q Consensus 236 ~~~~~~~~~~----~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~~~-~~---------~~~~~~~~ 298 (360)
|++.+..+.. +.+||+||||+|+. .......++...|+...++...+ ..... .. ....++..
T Consensus 209 y~~~~~~e~~kk~~~~~~DvVlD~vg~~-~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (347)
T KOG1198|consen 209 YKDENVVELIKKYTGKGVDVVLDCVGGS-TLTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVN 287 (347)
T ss_pred CCCHHHHHHHHhhcCCCccEEEECCCCC-ccccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccc
Confidence 9997554433 56899999999986 35677788887776555544331 11111 00 00011111
Q ss_pred -EEEeecCCHHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEecC
Q 018158 299 -VKGSMTGGMRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 299 -i~~~~~~~~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
..+......+.++.+.++++++++++++ +.||++++.+|++.+.+++..||+++.++
T Consensus 288 ~~~~~~~~~~~~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 288 YRWLYFVPSAEYLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD 346 (347)
T ss_pred eeeeeecCCHHHHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence 1222334567789999999999999998 99999999999999999999999999875
|
|
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-36 Score=273.76 Aligned_cols=292 Identities=21% Similarity=0.278 Sum_probs=246.2
Q ss_pred CceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCccC
Q 018158 23 KITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAA 101 (360)
Q Consensus 23 ~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 101 (360)
++.+++.+.|++++++|+||++++++|+.|...+.+.+. ...+|.++|||++|+|+++|++++.+++||+|++.+
T Consensus 13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~---- 88 (323)
T cd05282 13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLG---- 88 (323)
T ss_pred eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeC----
Confidence 788889999999999999999999999999998877653 234577899999999999999999999999998621
Q ss_pred CCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCCC
Q 018158 102 CMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLID 181 (360)
Q Consensus 102 ~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~ 181 (360)
..|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++.......
T Consensus 89 -------------------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~ 137 (323)
T cd05282 89 -------------------------------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLP 137 (323)
T ss_pred -------------------------------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCC
Confidence 1589999999999999999999999999999999999999988777655
Q ss_pred CCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHh---c--CCCcCEEEEc
Q 018158 182 SPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQA---G--KRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~---~--~~~~d~vid~ 255 (360)
++++++|+|+ |.+|++++|+|+.+|++|+++.+++++++.+++ +|+++++++.+...... . ++++|+++||
T Consensus 138 --~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~ 214 (323)
T cd05282 138 --PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKA-LGADEVIDSSPEDLAQRVKEATGGAGARLALDA 214 (323)
T ss_pred --CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHh-cCCCEEecccchhHHHHHHHHhcCCCceEEEEC
Confidence 9999999999 999999999999999999999999999999977 99999988776433222 1 5689999999
Q ss_pred CCCcccHHHHHHHhccCCEEEEeCCCCCC-cccChhhHhccCcEEEEeecCCH----------HHHHHHHHHHhcCCCcc
Q 018158 256 VSAKHSLGPILELLKVNGTLSVVGAPEAP-FELPSFPLIFGKRSVKGSMTGGM----------RETQEMMNVCGKYNITC 324 (360)
Q Consensus 256 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~~l~~~~l~~ 324 (360)
+|+.. ....+++++++|+++.+|..... ..++...+..++.++.+...... +.++.+++++.++.+.+
T Consensus 215 ~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 293 (323)
T cd05282 215 VGGES-ATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTT 293 (323)
T ss_pred CCCHH-HHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCccc
Confidence 99875 57889999999999999876532 34444455557888887655321 34677888999999876
Q ss_pred ce-EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 325 NI-EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 325 ~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
.. +.|+++++++|++.+.+++..||++++
T Consensus 294 ~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 294 PVGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred CccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 65 899999999999999998888999874
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-36 Score=274.07 Aligned_cols=312 Identities=22% Similarity=0.294 Sum_probs=241.4
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCC-CCCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDW-GITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|+|.++...+++..+.+++.+.|.++++||+||+.++++|++|.....+.. ....+|.++|||++|+|+++| ++.|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 566677666655679999999999999999999999999999987665322 123457889999999999964 57899
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++.+.. .|....|+|++|+.++++.++++|+++++++++.+++.+.
T Consensus 79 ~Gd~V~~~~~~-----------------------------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ 129 (326)
T cd08289 79 PGDEVIVTSYD-----------------------------LGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGF 129 (326)
T ss_pred CCCEEEEcccc-----------------------------cCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHH
Confidence 99999863210 1113469999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCC-CCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH--HHHh
Q 018158 169 TVFCPMKDNNLIDS-PAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM--QMQA 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~-~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~ 244 (360)
|||.++..+.+... ..+++++|+|+ |++|++++|+|+.+|++|+++++++++++.+++ +|++++++.++.. ....
T Consensus 130 ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~ 208 (326)
T cd08289 130 TAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKK-LGAKEVIPREELQEESIKP 208 (326)
T ss_pred HHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH-cCCCEEEcchhHHHHHHHh
Confidence 99988865433111 24789999999 999999999999999999999999999999987 9998888776541 1122
Q ss_pred c-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeecCC--HHHHHHHHHHHhc-
Q 018158 245 G-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTGG--MRETQEMMNVCGK- 319 (360)
Q Consensus 245 ~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~l~~- 319 (360)
. ++++|++||++|.. .+..++++++++|+++.+|.... ..+.....++.++.++.+..... ......+++.+.+
T Consensus 209 ~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (326)
T cd08289 209 LEKQRWAGAVDPVGGK-TLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATD 287 (326)
T ss_pred hccCCcCEEEECCcHH-HHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHhh
Confidence 2 46799999999985 67999999999999999997642 23333555667888888874321 1222333333322
Q ss_pred ---CCCccc-eEEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 320 ---YNITCN-IEVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 320 ---~~l~~~-i~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
..+... .++|+++++++|++.+.+++..||+++++
T Consensus 288 ~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 288 LKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred cCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 222233 48999999999999999999999999864
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >cd08249 enoyl_reductase_like enoyl_reductase_like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-36 Score=274.90 Aligned_cols=313 Identities=22% Similarity=0.249 Sum_probs=242.7
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|+|+++...+ ++++++++++.|+++++||+||++++++|++|++...+.+ ....|.++|||++|+|+.+|++++.|++
T Consensus 1 m~a~~~~~~~-~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 78 (339)
T cd08249 1 QKAAVLTGPG-GGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKV 78 (339)
T ss_pred CceEEeccCC-CCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCC
Confidence 4555554444 5889999999999999999999999999999998876654 2335678999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
||+|++.+... |+ +...+|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus 79 Gd~V~~~~~~~-~~--------------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~t 131 (339)
T cd08249 79 GDRVAGFVHGG-NP--------------------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVT 131 (339)
T ss_pred CCEEEEEeccc-cC--------------------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHH
Confidence 99998743210 00 0134699999999999999999999999999999999999
Q ss_pred hhchhhccCCC--------CCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH
Q 018158 170 VFCPMKDNNLI--------DSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240 (360)
Q Consensus 170 a~~~l~~~~~~--------~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 240 (360)
||+++....+. +..++++++|+|+ |++|++++++|+.+|++|+.+. ++++++.+++ +|+++++++.+.+
T Consensus 132 a~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~~-~g~~~v~~~~~~~ 209 (339)
T cd08249 132 AALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVKS-LGADAVFDYHDPD 209 (339)
T ss_pred HHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHHh-cCCCEEEECCCch
Confidence 99998765433 1248999999998 9999999999999999999888 5688888877 9999998876543
Q ss_pred HH---Hh-cCCCcCEEEEcCCCcccHHHHHHHhcc--CCEEEEeCCCCCCcccChhhHhccCcEEEEee-------cCCH
Q 018158 241 QM---QA-GKRTLDFILDTVSAKHSLGPILELLKV--NGTLSVVGAPEAPFELPSFPLIFGKRSVKGSM-------TGGM 307 (360)
Q Consensus 241 ~~---~~-~~~~~d~vid~~g~~~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~-------~~~~ 307 (360)
.. .. .++++|++||++|....+..+++++++ +|+++.+|......... .............. ....
T Consensus 210 ~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (339)
T cd08249 210 VVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETEPR-KGVKVKFVLGYTVFGEIPEDREFGE 288 (339)
T ss_pred HHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccccCC-CCceEEEEEeeeecccccccccchH
Confidence 22 22 256799999999985578999999999 99999998765322111 11111111111110 0112
Q ss_pred HHHHHHHHHHhcCCCccce-EEEC--CccHHHHHHHHHcCC-CceeEEEec
Q 018158 308 RETQEMMNVCGKYNITCNI-EVIK--PDQINEALDRLARND-VRYRFVIDI 354 (360)
Q Consensus 308 ~~~~~~~~~l~~~~l~~~i-~~~~--~~~~~~a~~~~~~~~-~~gkvvi~~ 354 (360)
..+..+++++.++++.+.. ..++ ++++++|++.+.+++ ..+|+|+++
T Consensus 289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 289 VFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred HHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 4567788899999987654 7788 999999999999988 889999874
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de |
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=268.77 Aligned_cols=308 Identities=21% Similarity=0.239 Sum_probs=246.0
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|+++.+.-.+....+.+++.+.|.+.++||+||++++++|++|++...+.++....|.++|||++|+|+++|+ ..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 3455554334445788888888889999999999999999999999888765455678899999999999995 57999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
||+|++.... .+....|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus 79 Gd~V~~~~~~-----------------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~t 129 (320)
T cd08243 79 GQRVATAMGG-----------------------------MGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYT 129 (320)
T ss_pred CCEEEEecCC-----------------------------CCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHH
Confidence 9999863210 01124589999999999999999999999999999999999
Q ss_pred hhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH--HHHHhcC
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA--MQMQAGK 246 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--~~~~~~~ 246 (360)
||+++......+ +|++++|+|+ |.+|++++|+|+.+|++|+++++++++.+.+++ +|++++++.... ......+
T Consensus 130 a~~~l~~~~~~~--~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~i~~~~ 206 (320)
T cd08243 130 AWGSLFRSLGLQ--PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKE-LGADEVVIDDGAIAEQLRAAP 206 (320)
T ss_pred HHHHHHHhcCCC--CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCcEEEecCccHHHHHHHhC
Confidence 999998877655 9999999999 999999999999999999999999999999977 999887654321 1222226
Q ss_pred CCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcc---cChhhH--hccCcEEEEeecCC--HHHHHHHHHHHhc
Q 018158 247 RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFE---LPSFPL--IFGKRSVKGSMTGG--MRETQEMMNVCGK 319 (360)
Q Consensus 247 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~--~~~~~~i~~~~~~~--~~~~~~~~~~l~~ 319 (360)
+++|+++|++|+. .+..++++++++|+++.+|...+... .....+ ..+++.+.++.... ...++.+++++.+
T Consensus 207 ~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (320)
T cd08243 207 GGFDKVLELVGTA-TLKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAA 285 (320)
T ss_pred CCceEEEECCChH-HHHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHHHC
Confidence 7899999999975 67899999999999999987532221 112222 25666766655432 2457788899999
Q ss_pred CCCccce-EEECCccHHHHHHHHHcCCCceeEEE
Q 018158 320 YNITCNI-EVIKPDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 320 ~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi 352 (360)
+.+++.. +.|+++++++|++.+.+++..||+++
T Consensus 286 ~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 286 GHLDIPPSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred CceecccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 9987644 89999999999999999888889886
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08252 AL_MDR Arginate lyase and other MDR family members | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=270.37 Aligned_cols=307 Identities=21% Similarity=0.288 Sum_probs=247.1
Q ss_pred cceeEEeccCCCC---CceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCC
Q 018158 10 QSVVGWAAHDPSG---KITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKN 86 (360)
Q Consensus 10 ~~~~~~~~~~~~~---~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 86 (360)
|+++++.-.+... .+++++++.|++.+++|+||+.++++|++|++.+.+.++....|.++|||++|+|+++|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 3556665544433 4777788888899999999999999999999988876643446778999999999999999999
Q ss_pred CCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccch
Q 018158 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCA 166 (360)
Q Consensus 87 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~ 166 (360)
|++||+|+..... ...|+|++|+.++.+.++++|+++++++++.+++.
T Consensus 81 ~~~Gd~V~~~~~~--------------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~ 128 (336)
T cd08252 81 FKVGDEVYYAGDI--------------------------------TRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLT 128 (336)
T ss_pred CCCCCEEEEcCCC--------------------------------CCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhH
Confidence 9999999852110 24589999999999999999999999999999999
Q ss_pred hhhhhchhhccCCCCCCC-----CcEEEEEcC-ChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 167 GITVFCPMKDNNLIDSPA-----KKRIGIVGL-GGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 167 ~~ta~~~l~~~~~~~~~~-----~~~vlI~Ga-g~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
+.+||+++......+ + +++++|+|+ |++|++++|+|+.+| ++|+++++++++.+.+++ +|++++++....
T Consensus 129 ~~ta~~~l~~~~~~~--~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~ 205 (336)
T cd08252 129 SLTAWEALFDRLGIS--EDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKE-LGADHVINHHQD 205 (336)
T ss_pred HHHHHHHHHHhcCCC--CCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCcEEEeCCcc
Confidence 999999986655544 5 999999997 999999999999999 899999999999999987 999888876632
Q ss_pred --HHHHhc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCC----------
Q 018158 240 --MQMQAG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGG---------- 306 (360)
Q Consensus 240 --~~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~---------- 306 (360)
...... ++++|++||++|....+..++++++++|+++.+|... ..++...+..++.++.+.....
T Consensus 206 ~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (336)
T cd08252 206 LAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMI 283 (336)
T ss_pred HHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--CcccchhhhcccceEEEEEeeccccccccchh
Confidence 112222 3679999999997657899999999999999998653 2333444445677776643321
Q ss_pred --HHHHHHHHHHHhcCCCccce----EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 307 --MRETQEMMNVCGKYNITCNI----EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 307 --~~~~~~~~~~l~~~~l~~~i----~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
...++++++++.++.+.+.. +.++++++++|++.+.++...||++++
T Consensus 284 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 284 EQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred hHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 13467788899999987642 357999999999999999888999874
|
This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil |
| >cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-35 Score=265.32 Aligned_cols=291 Identities=21% Similarity=0.309 Sum_probs=236.2
Q ss_pred CCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhh-ccCCCC--CCCCCccccccceEEEEecCCCCCCCCCCEEEec
Q 018158 20 PSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHV-KNDWGI--TMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96 (360)
Q Consensus 20 ~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~-~g~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 96 (360)
+++.+++++++.|++.++||+||+.++++|++|++.+ .|.... ..+|.++|+|++|+|+++|++++.+++||+|++
T Consensus 3 ~~~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~- 81 (312)
T cd08269 3 GPGRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG- 81 (312)
T ss_pred CCCeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE-
Confidence 4468999999999999999999999999999999987 665421 224778999999999999999999999999986
Q ss_pred cCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhc
Q 018158 97 CLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKD 176 (360)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~ 176 (360)
...|+|++|+.++.+.++++|+++ ..++.....+.++|+++.
T Consensus 82 -----------------------------------~~~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~- 123 (312)
T cd08269 82 -----------------------------------LSGGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR- 123 (312)
T ss_pred -----------------------------------ecCCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-
Confidence 235899999999999999999998 222222367788888887
Q ss_pred cCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHH---HHHhc--CCCcC
Q 018158 177 NNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAM---QMQAG--KRTLD 250 (360)
Q Consensus 177 ~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~---~~~~~--~~~~d 250 (360)
...+ +++++++|+|+|.+|++++|+|+.+|++ |+++.+++++.+.+++ +|++++++....+ ..... +.++|
T Consensus 124 ~~~~--~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~l~~~~~~~~vd 200 (312)
T cd08269 124 RGWI--RAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARE-LGATEVVTDDSEAIVERVRELTGGAGAD 200 (312)
T ss_pred hcCC--CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hCCceEecCCCcCHHHHHHHHcCCCCCC
Confidence 4444 4999999998899999999999999998 9999999888887777 9998888755432 22222 46899
Q ss_pred EEEEcCCCcccHHHHHHHhccCCEEEEeCCCC-CCcccChhhHhccCcEEEEeecCC----HHHHHHHHHHHhcCCCcc-
Q 018158 251 FILDTVSAKHSLGPILELLKVNGTLSVVGAPE-APFELPSFPLIFGKRSVKGSMTGG----MRETQEMMNVCGKYNITC- 324 (360)
Q Consensus 251 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~l~~~~l~~- 324 (360)
+++||.|....+..++++++++|+++.+|... ....++...+..+++++.++.... .+.++.+++++.++.+.+
T Consensus 201 ~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 280 (312)
T cd08269 201 VVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLG 280 (312)
T ss_pred EEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCch
Confidence 99999987667889999999999999998654 233444456677888887765433 357889999999999876
Q ss_pred -ce-EEECCccHHHHHHHHHcCCC-ceeEEE
Q 018158 325 -NI-EVIKPDQINEALDRLARNDV-RYRFVI 352 (360)
Q Consensus 325 -~i-~~~~~~~~~~a~~~~~~~~~-~gkvvi 352 (360)
++ +.|+++++++|++.+.+++. .+|+++
T Consensus 281 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 281 SLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred hheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 23 88999999999999999865 478876
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=263.11 Aligned_cols=310 Identities=21% Similarity=0.307 Sum_probs=245.3
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC-CCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|+|.++...+++..+++++.|.|+|+++||+||+.++++|++|+..+.|.+.. ..+|.++|||++|+|++ +++++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 45666655555568999999999999999999999999999999988876531 33577899999999998 7778899
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++... +.| ....|+|++|+.++.+.++++|+++++++++.+++.+.
T Consensus 79 ~Gd~V~~~~~---------------~~~--------------~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ 129 (324)
T cd08288 79 PGDRVVLTGW---------------GVG--------------ERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGF 129 (324)
T ss_pred CCCEEEECCc---------------cCC--------------CCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHH
Confidence 9999986310 000 12358999999999999999999999999999999999
Q ss_pred hhhchhh---ccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH-H
Q 018158 169 TVFCPMK---DNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM-Q 243 (360)
Q Consensus 169 ta~~~l~---~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~-~ 243 (360)
+|+.++. ..... +++++++|+|+ |++|++++|+|+.+|++|++++.++++.+.+++ +|+++++++++.... .
T Consensus 130 ta~~~~~~~~~~~~~--~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~ 206 (324)
T cd08288 130 TAMLCVMALEDHGVT--PGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLRS-LGASEIIDRAELSEPGR 206 (324)
T ss_pred HHHHHHHHHhhcCcC--CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh-cCCCEEEEcchhhHhhh
Confidence 9887765 33321 25789999999 999999999999999999999999999999977 999999988764331 1
Q ss_pred hc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeecCC------HHHHHHHHH
Q 018158 244 AG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTGG------MRETQEMMN 315 (360)
Q Consensus 244 ~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~ 315 (360)
.. ..++|.++|+++.. .+...+..++.+|+++.+|.... ....+...++.++.++.+..... .+.++.+++
T Consensus 207 ~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (324)
T cd08288 207 PLQKERWAGAVDTVGGH-TLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLAR 285 (324)
T ss_pred hhccCcccEEEECCcHH-HHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHH
Confidence 12 34689999999874 46788889999999999987532 22333444447788888764321 234566667
Q ss_pred HHhcCCCccceEEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 316 VCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 316 ~l~~~~l~~~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
++.++.+.+.++.++++++++|++.+.+++..||+++++
T Consensus 286 ~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 286 DLDPALLEALTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred HHhcCCccccceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 788888876569999999999999999999999999864
|
Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal |
| >cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=266.50 Aligned_cols=309 Identities=24% Similarity=0.287 Sum_probs=238.5
Q ss_pred cceeEEeccCCC-CCceEEEEeCCCC-CCCeEEEEEeeeecccchhhhhccCCC---------------CCCCCCccccc
Q 018158 10 QSVVGWAAHDPS-GKITPYIFKRREN-GVNDVTIKILYCGICHTDIHHVKNDWG---------------ITMYPVVPGHE 72 (360)
Q Consensus 10 ~~~~~~~~~~~~-~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~---------------~~~~p~~~G~e 72 (360)
|+|.++.-++.+ +.+++++.+.|+| +++||+||++++++|++|++.+.|... ....|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 455555434332 2488999999999 499999999999999999998877421 23557899999
Q ss_pred cceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECC
Q 018158 73 ITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVP 152 (360)
Q Consensus 73 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP 152 (360)
++|+|+++|+++++|++||+|++.+.. ...|+|++|+.++.+.++++|
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~--------------------------------~~~g~~~~~~~v~~~~~~~lp 128 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP--------------------------------WSQGTHAEYVVVPENEVSKKP 128 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC--------------------------------CCCccceeEEEecHHHeecCC
Confidence 999999999999999999999863211 235999999999999999999
Q ss_pred CCCCccccccccchhhhhhchhhccCCCCC--CCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC
Q 018158 153 ENIAMDAAAPLLCAGITVFCPMKDNNLIDS--PAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG 229 (360)
Q Consensus 153 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~--~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g 229 (360)
+++++++++.+++.+.+||+++.....+.. ++|++++|+|+ |++|++++++|+.+|++|+++.++ ++.+.+++ +|
T Consensus 129 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~~-~g 206 (350)
T cd08248 129 KNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVKS-LG 206 (350)
T ss_pred CCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHHH-hC
Confidence 999999999999999999999877665431 24999999997 999999999999999999888855 56666666 99
Q ss_pred CCeEeeCccHHHHHh--cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC--C--ccc---------ChhhHh-
Q 018158 230 ADEFILSTNAMQMQA--GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA--P--FEL---------PSFPLI- 293 (360)
Q Consensus 230 ~~~~v~~~~~~~~~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~--~~~---------~~~~~~- 293 (360)
.+++++..+.+.... ..+++|++||++|.. ....++++++++|+++.+|.... . ... ......
T Consensus 207 ~~~~~~~~~~~~~~~l~~~~~vd~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (350)
T cd08248 207 ADDVIDYNNEDFEEELTERGKFDVILDTVGGD-TEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNV 285 (350)
T ss_pred CceEEECCChhHHHHHHhcCCCCEEEECCChH-HHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHH
Confidence 988887765433222 246799999999987 67999999999999999985431 1 011 000000
Q ss_pred ---ccCcEEE-EeecCCHHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 294 ---FGKRSVK-GSMTGGMRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 294 ---~~~~~i~-~~~~~~~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
.+...+. +........+..+++++.++.+.+.+ +.|++++++++++.+.+++..+|++++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 286 KSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred HHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence 0111111 11122356788999999999987655 899999999999999988878888864
|
Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-34 Score=260.31 Aligned_cols=311 Identities=19% Similarity=0.261 Sum_probs=250.5
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|++.++...+.+..+.+++.+.|.+.+++|+|++.++++|++|+..+.|.+. ....|.++|||++|+|+++|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 3555555555556799999999999999999999999999999998877653 235678899999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++.+. |.. ...|++++|+.++.+.++++|+++++++++.+++.+.
T Consensus 81 ~Gd~v~~~~~--------------------------~~~----~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ 130 (325)
T cd08253 81 VGDRVWLTNL--------------------------GWG----RRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPAL 130 (325)
T ss_pred CCCEEEEecc--------------------------ccC----CCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHH
Confidence 9999986421 000 1358999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---Hh
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM---QA 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~ 244 (360)
+||+++.....+. +|++++|+|+ |.+|++++++++..|++|+++++++++.+.+++ +|++++++....+.. ..
T Consensus 131 ~a~~~l~~~~~~~--~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~ 207 (325)
T cd08253 131 TAYRALFHRAGAK--AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQ-AGADAVFNYRAEDLADRILA 207 (325)
T ss_pred HHHHHHHHHhCCC--CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCEEEeCCCcCHHHHHHH
Confidence 9999998766655 9999999998 999999999999999999999999999999977 999888876654222 22
Q ss_pred c--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCC--HH----HHHHHHHH
Q 018158 245 G--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGG--MR----ETQEMMNV 316 (360)
Q Consensus 245 ~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~----~~~~~~~~ 316 (360)
. ++++|+++++++.. .....+++++.+|+++.+|.......++...++.++.++.+..... +. .++.+.++
T Consensus 208 ~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (325)
T cd08253 208 ATAGQGVDVIIEVLANV-NLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAG 286 (325)
T ss_pred HcCCCceEEEEECCchH-HHHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHH
Confidence 1 46899999999886 4678889999999999998754333444444456677776654321 22 24555567
Q ss_pred HhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 317 CGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 317 l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+.++.+++.. +.|++++++++++.+.++...||+++++
T Consensus 287 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 287 LADGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred HHCCCccCccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 7788876654 8999999999999999988889999864
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=244.57 Aligned_cols=294 Identities=20% Similarity=0.174 Sum_probs=238.8
Q ss_pred CCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEec--CCCCCCCCCCEEEeccC
Q 018158 21 SGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVG--SNVKNFKVGDRAAVGCL 98 (360)
Q Consensus 21 ~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG--~~v~~~~~Gd~V~~~~~ 98 (360)
..+|+++|.++|+|+++|||+|+++.++.|. ...+....++--.|.-+|-..+|.++... |...+|++||.|..
T Consensus 24 ~d~F~lee~~vp~p~~GqvLl~~~ylS~DPy-mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~--- 99 (340)
T COG2130 24 PDDFRLEEVDVPEPGEGQVLLRTLYLSLDPY-MRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVG--- 99 (340)
T ss_pred CCCceeEeccCCCCCcCceEEEEEEeccCHH-HeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEe---
Confidence 3479999999999999999999999999983 22233333333456667776666555443 45677999999974
Q ss_pred ccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccc--cccccchhhhhhchhhc
Q 018158 99 AAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDA--AAPLLCAGITVFCPMKD 176 (360)
Q Consensus 99 ~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~--aa~l~~~~~ta~~~l~~ 176 (360)
..+|++|..++.+.+.|++++.-+.. ...|..++.|||.+|.+
T Consensus 100 -----------------------------------~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~ 144 (340)
T COG2130 100 -----------------------------------VSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLD 144 (340)
T ss_pred -----------------------------------cccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHH
Confidence 36899999999999999975543322 23778889999999999
Q ss_pred cCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhc----CCCcCE
Q 018158 177 NNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAG----KRTLDF 251 (360)
Q Consensus 177 ~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~----~~~~d~ 251 (360)
++..+ +|++++|-+| |++|..+.|+||..|+||+.++.++++.+.+++.+|.|.++||+..+..+.+ .+++|+
T Consensus 145 igqpk--~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDv 222 (340)
T COG2130 145 IGQPK--AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDV 222 (340)
T ss_pred hcCCC--CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEE
Confidence 99876 9999999999 9999999999999999999999999999999998999999999998544332 789999
Q ss_pred EEEcCCCcccHHHHHHHhccCCEEEEeCCCCC---C-cc---cChhhHhccCcEEEEeec-CC-----HHHHHHHHHHHh
Q 018158 252 ILDTVSAKHSLGPILELLKVNGTLSVVGAPEA---P-FE---LPSFPLIFGKRSVKGSMT-GG-----MRETQEMMNVCG 318 (360)
Q Consensus 252 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~-~~---~~~~~~~~~~~~i~~~~~-~~-----~~~~~~~~~~l~ 318 (360)
.||++|+. .+..++..|+..+|+..+|..+. . .+ -....++.+.+.+.|+.. .. .+..+++.+|+.
T Consensus 223 yfeNVGg~-v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~ 301 (340)
T COG2130 223 YFENVGGE-VLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVK 301 (340)
T ss_pred EEEcCCch-HHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHH
Confidence 99999998 68999999999999999997652 1 11 122346777899999877 22 245678889999
Q ss_pred cCCCccceE-EECCccHHHHHHHHHcCCCceeEEEecCC
Q 018158 319 KYNITCNIE-VIKPDQINEALDRLARNDVRYRFVIDIAG 356 (360)
Q Consensus 319 ~~~l~~~i~-~~~~~~~~~a~~~~~~~~~~gkvvi~~~~ 356 (360)
+|+++.... .-.|+++++||.-|.+++..||.|+++.+
T Consensus 302 ~GKi~~~eti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 302 EGKIQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred cCceeeEeeehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence 999987653 45699999999999999999999999863
|
|
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=258.50 Aligned_cols=304 Identities=23% Similarity=0.292 Sum_probs=249.0
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
||+.++.-.+.++.+++++.+.|.+.+++|+||+.++++|++|++...+.++ ....|.++|||++|+|+++|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 4555555555567788888888888999999999999999999998877653 234578899999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++. ..+|+|++|+.++.+.++++|+++++.+++.++..+.
T Consensus 81 ~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~ 125 (323)
T cd05276 81 VGDRVCAL-----------------------------------LAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFF 125 (323)
T ss_pred CCCEEEEe-----------------------------------cCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHH
Confidence 99999852 1348999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHH---h
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQ---A 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~---~ 244 (360)
++|+++.....+. ++++++|+|+ |++|++++++++..|++|+++++++++++.+++ +|.+.+++....+... .
T Consensus 126 ~a~~~~~~~~~~~--~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~ 202 (323)
T cd05276 126 TAWQNLFQLGGLK--AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRA-LGADVAINYRTEDFAEEVKE 202 (323)
T ss_pred HHHHHHHHhcCCC--CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-cCCCEEEeCCchhHHHHHHH
Confidence 9999987766655 9999999998 999999999999999999999999999999877 9988887766542221 1
Q ss_pred c--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeecCCH----------HHHH
Q 018158 245 G--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTGGM----------RETQ 311 (360)
Q Consensus 245 ~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~~----------~~~~ 311 (360)
. ++++|+++|++|... ....+++++++|+++.+|.... ...+....++.+++++.++..... ..+.
T Consensus 203 ~~~~~~~d~vi~~~g~~~-~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (323)
T cd05276 203 ATGGRGVDVILDMVGGDY-LARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFRE 281 (323)
T ss_pred HhCCCCeEEEEECCchHH-HHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHH
Confidence 1 467999999999764 6888999999999999986542 233444455568888888765432 2246
Q ss_pred HHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEE
Q 018158 312 EMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 312 ~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi 352 (360)
++++++.++.+.+.. +.|++++++++++.+.++...||+++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 282 HVWPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred HHHHHHHCCCccCCcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 677888888887654 89999999999999998887888774
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=258.65 Aligned_cols=301 Identities=20% Similarity=0.267 Sum_probs=240.4
Q ss_pred ceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC-CCCCCccccccceEEEEecCCCCCCCC
Q 018158 11 SVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 11 ~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|++.+...+.+..+++++.+.|.|.++||+|++.++++|++|+.++.|..+. ..+|.++|||++|+|+.+|++++.|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 81 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV 81 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence 5566666666678999999999999999999999999999999988886532 346788999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
||+|++.+ ..|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus 82 Gd~V~~~~-----------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~t 126 (331)
T cd08273 82 GDRVAALT-----------------------------------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVT 126 (331)
T ss_pred CCEEEEeC-----------------------------------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHH
Confidence 99998631 2489999999999999999999999999999999999
Q ss_pred hhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH--HhcC
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM--QAGK 246 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~--~~~~ 246 (360)
||+++.....+. ++++++|+|+ |++|++++++|+.+|++|+++++ +++.+.+++ +|+.. ++....+.. ....
T Consensus 127 a~~~l~~~~~~~--~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~ 201 (331)
T cd08273 127 AYQMLHRAAKVL--TGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHAALRE-LGATP-IDYRTKDWLPAMLTP 201 (331)
T ss_pred HHHHHHHhcCCC--CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHHHH-cCCeE-EcCCCcchhhhhccC
Confidence 999997766655 9999999998 99999999999999999999997 888888877 99654 333322111 1224
Q ss_pred CCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcc--cCh------------hhH--hccCcEEEEeecC-----
Q 018158 247 RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFE--LPS------------FPL--IFGKRSVKGSMTG----- 305 (360)
Q Consensus 247 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~~------------~~~--~~~~~~i~~~~~~----- 305 (360)
+++|++++++|+.. ...++++++.+|+++.+|....... ... ..+ ..+..........
T Consensus 202 ~~~d~vl~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 280 (331)
T cd08273 202 GGVDVVFDGVGGES-YEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDP 280 (331)
T ss_pred CCceEEEECCchHH-HHHHHHHhcCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCH
Confidence 57999999999875 7899999999999999987643211 110 001 1122222222211
Q ss_pred --CHHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEE
Q 018158 306 --GMRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 306 --~~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi 352 (360)
..+.+..+++++.++.+.+.+ +.|++++++++++.+.+++..||+|+
T Consensus 281 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 281 KLFRQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred HHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 125677888999999987755 89999999999999999888899886
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-33 Score=255.77 Aligned_cols=307 Identities=24% Similarity=0.314 Sum_probs=245.1
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
||+.++.-.+.++.+.+++.+.|++.+++|+|++.++++|++|+....+... ....|.++|||++|+|+++|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 3555554444445688888888889999999999999999999998877653 233477899999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++... |.. ...|+|++|+.++.+.++++|+++++.+++.++..+.
T Consensus 81 ~Gd~V~~~~~--------------------------~~~----~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~ 130 (326)
T cd08272 81 VGDEVYGCAG--------------------------GLG----GLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGI 130 (326)
T ss_pred CCCEEEEccC--------------------------CcC----CCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHH
Confidence 9999986320 000 1358999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH--HHHHhc
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA--MQMQAG 245 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--~~~~~~ 245 (360)
+||+++.+...+. ++++++|+|+ |++|++++++++.+|++|++++++ ++.+.+++ +|.+.+++.... ......
T Consensus 131 ~a~~~l~~~~~~~--~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~~-~g~~~~~~~~~~~~~~~~~~ 206 (326)
T cd08272 131 TAWEGLVDRAAVQ--AGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFARS-LGADPIIYYRETVVEYVAEH 206 (326)
T ss_pred HHHHHHHHhcCCC--CCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHHH-cCCCEEEecchhHHHHHHHh
Confidence 9999987666655 9999999997 999999999999999999999988 88888877 998888776543 111222
Q ss_pred --CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCC-----------HHHHHH
Q 018158 246 --KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGG-----------MRETQE 312 (360)
Q Consensus 246 --~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~ 312 (360)
++++|.++|+++.. .....+++++++|+++.+|... .........+++++.+..... .+.+..
T Consensus 207 ~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (326)
T cd08272 207 TGGRGFDVVFDTVGGE-TLDASFEAVALYGRVVSILGGA---THDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILRE 282 (326)
T ss_pred cCCCCCcEEEECCChH-HHHHHHHHhccCCEEEEEecCC---ccchhhHhhhcceEEEEEcccccccccchhhHHHHHHH
Confidence 46799999999986 5788999999999999998653 222223335667766654321 345677
Q ss_pred HHHHHhcCCCccc-e-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 313 MMNVCGKYNITCN-I-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 313 ~~~~l~~~~l~~~-i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+++++.++.+.+. . +.|++++++++++.+.+++..+|+++++
T Consensus 283 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 283 AARLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred HHHHHHCCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 8888889988765 3 8999999999999999888889999864
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd05286 QOR2 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-33 Score=253.37 Aligned_cols=297 Identities=22% Similarity=0.275 Sum_probs=242.4
Q ss_pred cCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEecc
Q 018158 18 HDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97 (360)
Q Consensus 18 ~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 97 (360)
.+....+.+.+.+.++++++||+|++.++++|++|++...+.++ ..+|.++|||++|+|+.+|+++.+|++||+|++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~-~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~ 86 (320)
T cd05286 8 TGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYP-LPLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG 86 (320)
T ss_pred CCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCC-CCCCccCCcceeEEEEEECCCCCCCCCCCEEEEec
Confidence 34445777888877788999999999999999999998887653 24577899999999999999999999999998521
Q ss_pred CccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhcc
Q 018158 98 LAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDN 177 (360)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~ 177 (360)
..|+|++|+.++.+.++++|++++..+++.+++.+.++|+++...
T Consensus 87 -----------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~ 131 (320)
T cd05286 87 -----------------------------------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRET 131 (320)
T ss_pred -----------------------------------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHh
Confidence 158999999999999999999999999999999999999998776
Q ss_pred CCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---HHhc--CCCcCE
Q 018158 178 NLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ---MQAG--KRTLDF 251 (360)
Q Consensus 178 ~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~--~~~~d~ 251 (360)
..+. ++++++|+|+ |++|++++++++.+|++|+++++++++.+.+++ +|++++++..+... .... ++++|+
T Consensus 132 ~~~~--~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 208 (320)
T cd05286 132 YPVK--PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELARA-AGADHVINYRDEDFVERVREITGGRGVDV 208 (320)
T ss_pred cCCC--CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-CCCCEEEeCCchhHHHHHHHHcCCCCeeE
Confidence 6655 9999999997 999999999999999999999999999999977 99988887665422 2222 467999
Q ss_pred EEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-cccChhhHhccCcEEEEeecC----CH----HHHHHHHHHHhcCCC
Q 018158 252 ILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-FELPSFPLIFGKRSVKGSMTG----GM----RETQEMMNVCGKYNI 322 (360)
Q Consensus 252 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~----~~----~~~~~~~~~l~~~~l 322 (360)
++||+++. ....++++++++|+++.+|..... ..++...+..+++++.+.... .. +.+..+++++.++.+
T Consensus 209 vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 287 (320)
T cd05286 209 VYDGVGKD-TFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKL 287 (320)
T ss_pred EEECCCcH-hHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCC
Confidence 99999875 678999999999999999875432 123333343667777544321 22 224567788888888
Q ss_pred ccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 323 TCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 323 ~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
.+.. +.|++++++++++.+.++...||+++++
T Consensus 288 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 288 KVEIGKRYPLADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred cCcccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 7655 8999999999999999988889999853
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone |
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=257.14 Aligned_cols=290 Identities=18% Similarity=0.167 Sum_probs=234.2
Q ss_pred CCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC---CCCCCCccccccceEEEEecCCCCCCCCCCEEEec
Q 018158 20 PSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG---ITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96 (360)
Q Consensus 20 ~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 96 (360)
+++.+.+++.+.|++.+++|+||+.++++|+.|.....+... +...+.++|+|++|+|+++|++ .|++||+|+.
T Consensus 16 ~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~- 92 (329)
T cd05288 16 PPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSG- 92 (329)
T ss_pred CccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEec-
Confidence 567899999999999999999999999999988665544321 1223567899999999999964 7999999974
Q ss_pred cCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeec-ceeEECCCCCC--cccccc-ccchhhhhhc
Q 018158 97 CLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADY-RFVVHVPENIA--MDAAAP-LLCAGITVFC 172 (360)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~-~~~~~iP~~~~--~~~aa~-l~~~~~ta~~ 172 (360)
.++|++|+.++. +.++++|++++ +.+++. +++.+.+||+
T Consensus 93 -------------------------------------~~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~ 135 (329)
T cd05288 93 -------------------------------------FLGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYF 135 (329)
T ss_pred -------------------------------------ccceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHH
Confidence 258999999999 99999999995 445555 8999999999
Q ss_pred hhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---Hhc-CC
Q 018158 173 PMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM---QAG-KR 247 (360)
Q Consensus 173 ~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~-~~ 247 (360)
++.....+. ++++++|+|+ |++|++++|+|+..|++|+++++++++.+.+++.+|+++++++.+.+.. ... ++
T Consensus 136 ~l~~~~~~~--~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~ 213 (329)
T cd05288 136 GLTEIGKPK--PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPD 213 (329)
T ss_pred HHHhccCCC--CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhccC
Confidence 997766655 9999999997 9999999999999999999999999998888776899888887764322 111 46
Q ss_pred CcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcc------cChhhHhccCcEEEEeecCCH-----HHHHHHHHH
Q 018158 248 TLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFE------LPSFPLIFGKRSVKGSMTGGM-----RETQEMMNV 316 (360)
Q Consensus 248 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~------~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~ 316 (360)
++|++||++|.. .+..++++++++|+++.+|....... .....++.++.++.++..... +.+..++++
T Consensus 214 ~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (329)
T cd05288 214 GIDVYFDNVGGE-ILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKW 292 (329)
T ss_pred CceEEEEcchHH-HHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHH
Confidence 799999999975 67899999999999999986543211 123445677888887665432 456778889
Q ss_pred HhcCCCccc-eEEECCccHHHHHHHHHcCCCceeEEE
Q 018158 317 CGKYNITCN-IEVIKPDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 317 l~~~~l~~~-i~~~~~~~~~~a~~~~~~~~~~gkvvi 352 (360)
+.++.+++. +..+++++++++++.+.+++..||+++
T Consensus 293 ~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 293 LAEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred HHCCCccccccccccHHHHHHHHHHHhcCCCccceeC
Confidence 999998764 477999999999999998888888874
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-33 Score=257.06 Aligned_cols=302 Identities=21% Similarity=0.226 Sum_probs=226.7
Q ss_pred CCCCCceEEEEeCCCC---CCCeEEEEEeeeecccchhhhhccCCCCCC-CCCccccccceEEEEecCCCC-CCCCCCEE
Q 018158 19 DPSGKITPYIFKRREN---GVNDVTIKILYCGICHTDIHHVKNDWGITM-YPVVPGHEITGIITKVGSNVK-NFKVGDRA 93 (360)
Q Consensus 19 ~~~~~l~~~~~~~p~~---~~~evlVkv~~~~i~~~D~~~~~g~~~~~~-~p~~~G~e~~G~V~~vG~~v~-~~~~Gd~V 93 (360)
.+.+.+++++++.|.| ++++|+||+.++++|++|+..+.+...... .|.++|+|++|+|+++|++++ .|++||+|
T Consensus 8 ~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V 87 (352)
T cd08247 8 NNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEWKVGDEV 87 (352)
T ss_pred cCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCCCCCCEE
Confidence 3334555665555544 999999999999999999988754322222 377899999999999999998 89999999
Q ss_pred EeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecc----eeEECCCCCCccccccccchhhh
Q 018158 94 AVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYR----FVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~----~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
++.... .| ...|+|++|+.++.. .++++|+++++++++.+++.+.|
T Consensus 88 ~~~~~~---------------~~---------------~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~t 137 (352)
T cd08247 88 CGIYPH---------------PY---------------GGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGT 137 (352)
T ss_pred EEeecC---------------CC---------------CCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHH
Confidence 863211 00 135899999999987 79999999999999999999999
Q ss_pred hhchhhccC-CCCCCCCcEEEEEcC-ChHHHHHHHHHHHc-CC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHH---HH
Q 018158 170 VFCPMKDNN-LIDSPAKKRIGIVGL-GGLGHVAVKFGKAF-GH-HVTVISTSPSKEKEAKELLGADEFILSTNAM---QM 242 (360)
Q Consensus 170 a~~~l~~~~-~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~-G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~---~~ 242 (360)
||+++.... .++ +|++++|+|+ |.+|++++|+|+.+ |. .|+.+. ++++.+.+++ +|++++++.++.. ..
T Consensus 138 a~~~l~~~~~~~~--~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~-~g~~~~i~~~~~~~~~~~ 213 (352)
T cd08247 138 AYQILEDLGQKLG--PDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKK-LGADHFIDYDAHSGVKLL 213 (352)
T ss_pred HHHHHHHhhhccC--CCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHH-hCCCEEEecCCCcccchH
Confidence 999998776 555 9999999999 89999999999987 55 577766 5565667766 9998888865533 11
Q ss_pred ----Hh-c-CCCcCEEEEcCCCcccHHHHHHHhc---cCCEEEEeCCCC-CCcc-----------cCh----hhHhccCc
Q 018158 243 ----QA-G-KRTLDFILDTVSAKHSLGPILELLK---VNGTLSVVGAPE-APFE-----------LPS----FPLIFGKR 297 (360)
Q Consensus 243 ----~~-~-~~~~d~vid~~g~~~~~~~~~~~l~---~~G~~v~~g~~~-~~~~-----------~~~----~~~~~~~~ 297 (360)
.. . ++++|++|||+|.......++++++ ++|+++.++... .... ... ........
T Consensus 214 ~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (352)
T cd08247 214 KPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSY 293 (352)
T ss_pred HHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCc
Confidence 11 1 5689999999998556788999999 999999874221 1110 000 11112333
Q ss_pred EEEEeec-CCHHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 298 SVKGSMT-GGMRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 298 ~i~~~~~-~~~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
.+..... ...+.++.+++++.++.+.+.. +.++++++++|++.+++++..||+++++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 294 NYQFFLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred ceEEEEecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 3332221 1235678888999999987755 8999999999999999998889999864
|
This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi |
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-33 Score=247.97 Aligned_cols=265 Identities=28% Similarity=0.474 Sum_probs=223.3
Q ss_pred eEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCc
Q 018158 38 DVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYC 116 (360)
Q Consensus 38 evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c 116 (360)
||+|++.++++|+.|++.+.|..+ ...+|.++|||++|+|+++|+.++.|++||+|++.+. ..|+.|.+|.. .|
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~----~~ 75 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPN-LGCGTCELCRE----LC 75 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCC-CCCCCCHHHHh----hC
Confidence 689999999999999999988764 3456788999999999999999999999999988655 58999999997 67
Q ss_pred ccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChH
Q 018158 117 DKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGL 196 (360)
Q Consensus 117 ~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~v 196 (360)
+...+ .+....|+|++|+.++.+.++++|+++++++++.++..+.+||+++.....+. ++++++|+|+|++
T Consensus 76 ~~~~~-------~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~--~~~~vli~g~~~~ 146 (271)
T cd05188 76 PGGGI-------LGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLK--PGDTVLVLGAGGV 146 (271)
T ss_pred CCCCE-------eccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCC--CCCEEEEECCCHH
Confidence 65432 22245799999999999999999999999999999999999999998887655 9999999999559
Q ss_pred HHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHh----cCCCcCEEEEcCCCcccHHHHHHHhccC
Q 018158 197 GHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQA----GKRTLDFILDTVSAKHSLGPILELLKVN 272 (360)
Q Consensus 197 G~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~----~~~~~d~vid~~g~~~~~~~~~~~l~~~ 272 (360)
|++++++++..|.+|+++++++++.+.+++ +|.+++++..+...... .++++|+++++++.......++++++++
T Consensus 147 G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~ 225 (271)
T cd05188 147 GLLAAQLAKAAGARVIVTDRSDEKLELAKE-LGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPG 225 (271)
T ss_pred HHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-hCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccC
Confidence 999999999999999999999999999887 89888887665433222 2578999999999844678999999999
Q ss_pred CEEEEeCCCCCCccc-ChhhHhccCcEEEEeecCCHHHHHHHHHHH
Q 018158 273 GTLSVVGAPEAPFEL-PSFPLIFGKRSVKGSMTGGMRETQEMMNVC 317 (360)
Q Consensus 273 G~~v~~g~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l 317 (360)
|+++.+|........ .....+.+++++.++....+.+++++++++
T Consensus 226 G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (271)
T cd05188 226 GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALDLL 271 (271)
T ss_pred CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCCHHHHHHHHhhC
Confidence 999999976543332 244567889999999988888888887653
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-33 Score=251.53 Aligned_cols=302 Identities=24% Similarity=0.304 Sum_probs=241.6
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC---CCCCCCccccccceEEEEecCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG---ITMYPVVPGHEITGIITKVGSNVKN 86 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~ 86 (360)
|++.++...+....+.+++.+.|+++++||+||+.++++|++|+..+.|... ....|..+|||++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 3445554334444567888888889999999999999999999998877542 2345788999999999999999999
Q ss_pred CCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccch
Q 018158 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCA 166 (360)
Q Consensus 87 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~ 166 (360)
+++||+|++.+.. ...|+|++|+.++.+.++++|+++++.+++.+++.
T Consensus 81 ~~~G~~V~~~~~~--------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 128 (309)
T cd05289 81 FKVGDEVFGMTPF--------------------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLA 128 (309)
T ss_pred CCCCCEEEEccCC--------------------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHH
Confidence 9999999863211 12589999999999999999999999999999999
Q ss_pred hhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH-Hh
Q 018158 167 GITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM-QA 244 (360)
Q Consensus 167 ~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~-~~ 244 (360)
+.++|+++.....+. ++++++|+|+ |.+|++++++++..|++|+++++++ +.+.+++ +|.+.+++....+.. ..
T Consensus 129 ~~~a~~~~~~~~~~~--~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~~-~g~~~~~~~~~~~~~~~~ 204 (309)
T cd05289 129 GLTAWQALFELGGLK--AGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFLRS-LGADEVIDYTKGDFERAA 204 (309)
T ss_pred HHHHHHHHHhhcCCC--CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHHH-cCCCEEEeCCCCchhhcc
Confidence 999999998876655 9999999998 9999999999999999999998777 7787766 998888776554322 12
Q ss_pred cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCC-HHHHHHHHHHHhcCCCc
Q 018158 245 GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGG-MRETQEMMNVCGKYNIT 323 (360)
Q Consensus 245 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~l~~~~l~ 323 (360)
.++++|++++++++. ....++++++++|+++.+|....... ....++..+....... .+.+..+++++.++.+.
T Consensus 205 ~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (309)
T cd05289 205 APGGVDAVLDTVGGE-TLARSLALVKPGGRLVSIAGPPPAEQ----AAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLR 279 (309)
T ss_pred CCCCceEEEECCchH-HHHHHHHHHhcCcEEEEEcCCCcchh----hhhhccceEEEEEecccHHHHHHHHHHHHCCCEE
Confidence 356799999999987 57899999999999999987543211 2233444444433222 56788899999999887
Q ss_pred cce-EEECCccHHHHHHHHHcCCCceeEEE
Q 018158 324 CNI-EVIKPDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 324 ~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi 352 (360)
+.+ +.|++++++++++.+.+++..+|+++
T Consensus 280 ~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 280 PVVDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred EeeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 655 89999999999999998887788774
|
Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et |
| >cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=251.77 Aligned_cols=296 Identities=27% Similarity=0.378 Sum_probs=235.0
Q ss_pred CCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCccC
Q 018158 22 GKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAA 101 (360)
Q Consensus 22 ~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 101 (360)
.++.+++.+.|++.+++|+||+.++++|++|+..+.+......+|.++|||++|+|+.+|++++.+++||+|++.+..
T Consensus 13 ~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~-- 90 (325)
T cd08271 13 LQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKVGDRVAYHASL-- 90 (325)
T ss_pred ceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCCCCEEEeccCC--
Confidence 389999999999999999999999999999999887765333447789999999999999999999999999863211
Q ss_pred CCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCCC
Q 018158 102 CMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLID 181 (360)
Q Consensus 102 ~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~ 181 (360)
...|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++.....+.
T Consensus 91 ------------------------------~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~ 140 (325)
T cd08271 91 ------------------------------ARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIE 140 (325)
T ss_pred ------------------------------CCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCC
Confidence 13589999999999999999999999999999999999999998777655
Q ss_pred CCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---HHh--cCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ---MQA--GKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~--~~~~~d~vid~ 255 (360)
+|++++|+|+ |++|++++++++..|++|+++. ++++.+.+.+ +|++.+++...... ... .++++|+++++
T Consensus 141 --~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 216 (325)
T cd08271 141 --AGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVKS-LGADHVIDYNDEDVCERIKEITGGRGVDAVLDT 216 (325)
T ss_pred --CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHHH-cCCcEEecCCCccHHHHHHHHcCCCCCcEEEEC
Confidence 9999999999 8999999999999999998887 6777788866 99988887655322 222 24679999999
Q ss_pred CCCcccHHHHHHHhccCCEEEEeCCCCCCcccCh--hhHhccCcEEEEeecCC--------HHHHHHHHHHHhcCCCccc
Q 018158 256 VSAKHSLGPILELLKVNGTLSVVGAPEAPFELPS--FPLIFGKRSVKGSMTGG--------MRETQEMMNVCGKYNITCN 325 (360)
Q Consensus 256 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~--~~~~~~~~~i~~~~~~~--------~~~~~~~~~~l~~~~l~~~ 325 (360)
+++.. ....+++++++|+++.+|.......... .....+.+.+....... .+.+..+++++.++.+.+.
T Consensus 217 ~~~~~-~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 295 (325)
T cd08271 217 VGGET-AAALAPTLAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPL 295 (325)
T ss_pred CCcHh-HHHHHHhhccCCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeec
Confidence 98864 5678999999999999875432211111 11222333333322111 1234667788888888764
Q ss_pred -eEEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 326 -IEVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 326 -i~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
++.|+++++.++++.+.++...+|+++++
T Consensus 296 ~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 296 VIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred cceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 48999999999999999988889999864
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-32 Score=247.50 Aligned_cols=306 Identities=22% Similarity=0.280 Sum_probs=247.5
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|++..+...+....+.+++.+.|++++++++||+.++++|++|+....+.+. +..+|.++|||++|+|+.+|+.+..|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 3455554444456688888777778999999999999999999998877653 233467899999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++. ..+|++++|+.++.+.++++|+++++.+++.++..+.
T Consensus 81 ~Gd~V~~~-----------------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ 125 (325)
T TIGR02824 81 VGDRVCAL-----------------------------------VAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFF 125 (325)
T ss_pred CCCEEEEc-----------------------------------cCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHH
Confidence 99999862 1348999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---Hh
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM---QA 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~ 244 (360)
++|+++.....+. ++++++|+|+ |++|++++++++.+|++|+++.+++++.+.+++ +|.+.+++....+.. ..
T Consensus 126 ta~~~~~~~~~~~--~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~ 202 (325)
T TIGR02824 126 TVWSNLFQRGGLK--AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACEA-LGADIAINYREEDFVEVVKA 202 (325)
T ss_pred HHHHHHHHhcCCC--CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcEEEecCchhHHHHHHH
Confidence 9999977666655 9999999998 999999999999999999999999998888866 998777766543222 11
Q ss_pred c--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeecCCH----------HHHH
Q 018158 245 G--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTGGM----------RETQ 311 (360)
Q Consensus 245 ~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~~----------~~~~ 311 (360)
. ++++|++++++|.. .+..++++++++|+++.+|.... ...++...++.+++++.+...... ..+.
T Consensus 203 ~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (325)
T TIGR02824 203 ETGGKGVDVILDIVGGS-YLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELRE 281 (325)
T ss_pred HcCCCCeEEEEECCchH-HHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHH
Confidence 1 45799999999875 57889999999999999986542 224445555578899888765331 2235
Q ss_pred HHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 312 EMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 312 ~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
++++++.++.+.+.. +.|++++++++++.+.++...||+++++
T Consensus 282 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 282 HVWPLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred HHHHHHHCCcccCccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 567788888887654 8899999999999999988889999864
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=250.38 Aligned_cols=301 Identities=24% Similarity=0.282 Sum_probs=233.6
Q ss_pred EeccCCCCCc--eEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC---CCCCCCccccccceEEEEecCCCCCCCC
Q 018158 15 WAAHDPSGKI--TPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG---ITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 15 ~~~~~~~~~l--~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|..+++..++ ++++.+.|+++++||+|+++++++|++|++.+.|.++ ....+..+|||++|+|+++|+++..|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~ 82 (319)
T cd08267 3 YTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKV 82 (319)
T ss_pred eCCCCChhhhhhccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCC
Confidence 3344554555 8889999999999999999999999999998877552 1234678999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
||+|+..... ...|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus 83 Gd~V~~~~~~--------------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~ 130 (319)
T cd08267 83 GDEVFGRLPP--------------------------------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLT 130 (319)
T ss_pred CCEEEEeccC--------------------------------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHH
Confidence 9999863210 13489999999999999999999999999999999999
Q ss_pred hhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH--HhcC
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM--QAGK 246 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~--~~~~ 246 (360)
||+++.....++ ++++++|+|+ |++|++++++|+.+|++|++++++ ++.+.+++ +|.+++++....+.. ...+
T Consensus 131 a~~~~~~~~~~~--~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 206 (319)
T cd08267 131 ALQALRDAGKVK--PGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAELVRS-LGADEVIDYTTEDFVALTAGG 206 (319)
T ss_pred HHHHHHHhcCCC--CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHHHH-cCCCEeecCCCCCcchhccCC
Confidence 999998887665 9999999998 999999999999999999998865 77888877 998888776543221 1225
Q ss_pred CCcCEEEEcCCCc-ccHHHHHHHhccCCEEEEeCCCCCCcccC-----hhh-HhccCcEEEEeecCCHHHHHHHHHHHhc
Q 018158 247 RTLDFILDTVSAK-HSLGPILELLKVNGTLSVVGAPEAPFELP-----SFP-LIFGKRSVKGSMTGGMRETQEMMNVCGK 319 (360)
Q Consensus 247 ~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-----~~~-~~~~~~~i~~~~~~~~~~~~~~~~~l~~ 319 (360)
+++|++++|+|.. .........++++|+++.+|......... ... ...+.+.... .....+.+..+++++.+
T Consensus 207 ~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~ 285 (319)
T cd08267 207 EKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFL-AKPNAEDLEQLAELVEE 285 (319)
T ss_pred CCCcEEEECCCchHHHHHHhhhccCCCCEEEEeccccccccccccccchhhccccceEEEEE-ecCCHHHHHHHHHHHHC
Confidence 6799999999853 12233333499999999998754322111 111 1112222222 22236778999999999
Q ss_pred CCCccce-EEECCccHHHHHHHHHcCCCceeEEE
Q 018158 320 YNITCNI-EVIKPDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 320 ~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi 352 (360)
+++.+.+ +.|+++++++|++.+.+++..+|+++
T Consensus 286 ~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 286 GKLKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred CCeeeeeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 9987655 89999999999999998887788774
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-32 Score=246.54 Aligned_cols=310 Identities=20% Similarity=0.255 Sum_probs=245.9
Q ss_pred ceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCCC
Q 018158 11 SVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 11 ~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|+..+.-.+....+.+++.+.|.+.+++++|++.++++|+.|+....+.+. ...+|.++|||++|+|+.+|+++..|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 81 (328)
T cd08268 2 RAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFAV 81 (328)
T ss_pred eEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCCC
Confidence 444444334456788888888888999999999999999999998877653 2244778999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
||+|++.+.. .....|++++|+.++.+.++++|+++++++++.+++.+.+
T Consensus 82 Gd~V~~~~~~------------------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 131 (328)
T cd08268 82 GDRVSVIPAA------------------------------DLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLT 131 (328)
T ss_pred CCEEEecccc------------------------------ccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHH
Confidence 9999863210 0124589999999999999999999999999999999999
Q ss_pred hhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---Hhc
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM---QAG 245 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~ 245 (360)
+|+++.....+. ++++++|+|+ |.+|++++++++..|++|+.++++.++.+.+++ +|.+.+++....... ...
T Consensus 132 a~~~~~~~~~~~--~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 208 (328)
T cd08268 132 AYGALVELAGLR--PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLA-LGAAHVIVTDEEDLVAEVLRI 208 (328)
T ss_pred HHHHHHHhcCCC--CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-cCCCEEEecCCccHHHHHHHH
Confidence 999987766655 8999999999 999999999999999999999999999999877 898888776553221 111
Q ss_pred --CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeecCC----HHH----HHHHH
Q 018158 246 --KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTGG----MRE----TQEMM 314 (360)
Q Consensus 246 --~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~----~~~----~~~~~ 314 (360)
+.++|+++++.+.. ....++++++++|+++.+|.... ...++....+.++..+.+..... ..+ ++.+.
T Consensus 209 ~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (328)
T cd08268 209 TGGKGVDVVFDPVGGP-QFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFIL 287 (328)
T ss_pred hCCCCceEEEECCchH-hHHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHH
Confidence 45799999999985 57889999999999999986542 22333333567788877765432 223 34445
Q ss_pred HHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 315 NVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 315 ~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+++.++.+.+.. +.|+++++.++++.+.+++..||+++++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 288 DGLASGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328 (328)
T ss_pred HHHHCCCCcCCcccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 567777776654 8899999999999999888889999863
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=244.37 Aligned_cols=304 Identities=25% Similarity=0.371 Sum_probs=244.6
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCC-CCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENG-VNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNF 87 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~-~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~ 87 (360)
|++.++.-.+.+..+.+.+.+ |.+. +++++|++.++++|++|++.+.|.+. ....|.++|||++|+|+.+|+++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 345554434455678887777 6666 59999999999999999998877653 22346689999999999999999999
Q ss_pred CCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchh
Q 018158 88 KVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAG 167 (360)
Q Consensus 88 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~ 167 (360)
++||+|+..+ ..|++++|+.++.+.++++|++++..+++.+...+
T Consensus 80 ~~G~~V~~~~-----------------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 124 (323)
T cd08241 80 KVGDRVVALT-----------------------------------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTY 124 (323)
T ss_pred CCCCEEEEec-----------------------------------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHH
Confidence 9999998621 15899999999999999999999999988899999
Q ss_pred hhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---H
Q 018158 168 ITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM---Q 243 (360)
Q Consensus 168 ~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~ 243 (360)
.+||+++.....+. ++++++|+|+ |++|++++++++..|++|+++++++++.+.+++ +|.+.+++....+.. .
T Consensus 125 ~~a~~~~~~~~~~~--~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~i~ 201 (323)
T cd08241 125 GTAYHALVRRARLQ--PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALARA-LGADHVIDYRDPDLRERVK 201 (323)
T ss_pred HHHHHHHHHhcCCC--CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHH-cCCceeeecCCccHHHHHH
Confidence 99999987666655 9999999999 999999999999999999999999999999987 898877776553221 2
Q ss_pred hc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcc-cChhhHhccCcEEEEeecCC---------HHHHH
Q 018158 244 AG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFE-LPSFPLIFGKRSVKGSMTGG---------MRETQ 311 (360)
Q Consensus 244 ~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~~---------~~~~~ 311 (360)
.. ++++|.+++++|.. ....++++++++|+++.+|....... +.......++.++.+..... .+.+.
T Consensus 202 ~~~~~~~~d~v~~~~g~~-~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (323)
T cd08241 202 ALTGGRGVDVVYDPVGGD-VFEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLA 280 (323)
T ss_pred HHcCCCCcEEEEECccHH-HHHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHH
Confidence 22 46799999999874 57889999999999999987543332 33334556788888765432 14567
Q ss_pred HHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 312 EMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 312 ~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
.+++++.++.+.+.. +.|++++++++++.+.++...||++++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 281 ELFDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred HHHHHHHCCCcccccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 788899999887655 899999999999999988878888864
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >cd08251 polyketide_synthase polyketide synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-31 Score=241.43 Aligned_cols=283 Identities=20% Similarity=0.263 Sum_probs=226.7
Q ss_pred CCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhh
Q 018158 31 RRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCK 109 (360)
Q Consensus 31 ~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~ 109 (360)
.|++.+++|+||+.++++|++|+..+.+.++ ...+|.++|+|++|+|+++|+++++|++||+|++.+.
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----------- 70 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG----------- 70 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC-----------
Confidence 5778999999999999999999999888653 2346778999999999999999999999999986321
Q ss_pred CCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEE
Q 018158 110 DSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIG 189 (360)
Q Consensus 110 ~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vl 189 (360)
...|+|++|+.++.+.++++|+++++++++.++..+.+||+++.. .. +++|++++
T Consensus 71 ----------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~-~~--~~~g~~vl 125 (303)
T cd08251 71 ----------------------ESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFAR-AG--LAKGEHIL 125 (303)
T ss_pred ----------------------CCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHh-cC--CCCCCEEE
Confidence 235899999999999999999999999999999999999999863 44 45999999
Q ss_pred EEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---Hhc--CCCcCEEEEcCCCcccHH
Q 018158 190 IVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM---QAG--KRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 190 I~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~--~~~~d~vid~~g~~~~~~ 263 (360)
|+|+ |++|++++|+++.+|++|+++++++++++.+++ +|++.+++....+.. ... ++++|+++|+++.. ...
T Consensus 126 i~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~-~~~ 203 (303)
T cd08251 126 IQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLKQ-LGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGE-AIQ 203 (303)
T ss_pred EecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-cCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHH-HHH
Confidence 9987 999999999999999999999999999999977 999888876654222 212 46799999999764 578
Q ss_pred HHHHHhccCCEEEEeCCCCC--CcccChhhHhccCcEEEEeec-----CC----HHHHHHHHHHHhcCCCccce-EEECC
Q 018158 264 PILELLKVNGTLSVVGAPEA--PFELPSFPLIFGKRSVKGSMT-----GG----MRETQEMMNVCGKYNITCNI-EVIKP 331 (360)
Q Consensus 264 ~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~-----~~----~~~~~~~~~~l~~~~l~~~i-~~~~~ 331 (360)
..+++++++|+++.+|.... ...+.... +.++..+..... .. .+.+.++++++.++.+++.. +.|++
T Consensus 204 ~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 282 (303)
T cd08251 204 KGLNCLAPGGRYVEIAMTALKSAPSVDLSV-LSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPF 282 (303)
T ss_pred HHHHHhccCcEEEEEeccCCCccCccChhH-hhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcH
Confidence 89999999999999876431 12222222 222222222111 11 13467778888899887654 89999
Q ss_pred ccHHHHHHHHHcCCCceeEEE
Q 018158 332 DQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 332 ~~~~~a~~~~~~~~~~gkvvi 352 (360)
++++++++.+.+++..||+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 283 DDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred HHHHHHHHHHHhCCCcceEeC
Confidence 999999999999888888874
|
Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a |
| >cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-30 Score=238.39 Aligned_cols=296 Identities=23% Similarity=0.327 Sum_probs=235.5
Q ss_pred CCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCCCCCEEEecc
Q 018158 19 DPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGC 97 (360)
Q Consensus 19 ~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 97 (360)
+....+.+.+.+.|++.+++|+||+.++++|++|+..+.|.+. ....|.++|||++|+|+.+|+++.+|++||+|++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~- 87 (337)
T cd08275 9 GGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGL- 87 (337)
T ss_pred CCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEe-
Confidence 3445788888888888999999999999999999998887653 23457789999999999999999999999999862
Q ss_pred CccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhcc
Q 018158 98 LAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDN 177 (360)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~ 177 (360)
...|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++...
T Consensus 88 ----------------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~ 133 (337)
T cd08275 88 ----------------------------------TRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFEL 133 (337)
T ss_pred ----------------------------------cCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHh
Confidence 1248999999999999999999999999999999999999998777
Q ss_pred CCCCCCCCcEEEEEcC-ChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---HHh-cCCCcCE
Q 018158 178 NLIDSPAKKRIGIVGL-GGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ---MQA-GKRTLDF 251 (360)
Q Consensus 178 ~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~-~~~~~d~ 251 (360)
..+. ++++++|+|+ |.+|++++++|+.+ +..++.. .++++.+.+.+ +|++.+++...... ... .++++|+
T Consensus 134 ~~~~--~~~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~d~ 209 (337)
T cd08275 134 GNLR--PGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGT-ASASKHEALKE-NGVTHVIDYRTQDYVEEVKKISPEGVDI 209 (337)
T ss_pred hCCC--CCCEEEEEcCcchHHHHHHHHHHHccCcEEEEe-CCHHHHHHHHH-cCCcEEeeCCCCcHHHHHHHHhCCCceE
Confidence 6655 9999999999 99999999999998 3333322 24557788876 99888887654321 221 2567999
Q ss_pred EEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC----c-------------ccChhhHhccCcEEEEeecCC----H---
Q 018158 252 ILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP----F-------------ELPSFPLIFGKRSVKGSMTGG----M--- 307 (360)
Q Consensus 252 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~-------------~~~~~~~~~~~~~i~~~~~~~----~--- 307 (360)
++|++|+. ....++++++++|+++.+|..... . .+....++.++.++.++.... .
T Consensus 210 v~~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (337)
T cd08275 210 VLDALGGE-DTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELL 288 (337)
T ss_pred EEECCcHH-HHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHH
Confidence 99999976 568899999999999999865421 1 111234567778887765421 1
Q ss_pred -HHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 308 -RETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 308 -~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
..+.++++++.++.+.+.. +.|++++++++++.+.+++..||+++++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 289 TEVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHHHHHHHHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 2356777888899887665 8999999999999999988889999864
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd05195 enoyl_red enoyl reductase of polyketide synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-30 Score=231.27 Aligned_cols=273 Identities=21% Similarity=0.297 Sum_probs=222.3
Q ss_pred CeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCc
Q 018158 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYC 116 (360)
Q Consensus 37 ~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c 116 (360)
+||+||+.++++|++|++...|.. ..+|.++|||++|+|+++|+.++.|++||+|++
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~--------------------- 57 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMG--------------------- 57 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEE---------------------
Confidence 589999999999999999988764 245788999999999999999999999999986
Q ss_pred ccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcC-Ch
Q 018158 117 DKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GG 195 (360)
Q Consensus 117 ~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~ 195 (360)
...|+|++|+.++.+.++++|+++++.+++.+++.+.++|.++.....++ +|++++|+|+ |+
T Consensus 58 ---------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~--~g~~vlv~g~~g~ 120 (293)
T cd05195 58 ---------------LAPGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQ--KGESVLIHAAAGG 120 (293)
T ss_pred ---------------EecCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccC--CCCEEEEecCCCH
Confidence 23589999999999999999999999999999999999999987766655 9999999987 99
Q ss_pred HHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC--CCeEeeCccHHH---HHhc--CCCcCEEEEcCCCcccHHHHHHH
Q 018158 196 LGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG--ADEFILSTNAMQ---MQAG--KRTLDFILDTVSAKHSLGPILEL 268 (360)
Q Consensus 196 vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g--~~~~v~~~~~~~---~~~~--~~~~d~vid~~g~~~~~~~~~~~ 268 (360)
+|++++|+++.+|++|+++++++++.+.+++ .| ++.+++..+.+. .... ++++|++++++|.. .+..++++
T Consensus 121 ~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~ 198 (293)
T cd05195 121 VGQAAIQLAQHLGAEVFATVGSEEKREFLRE-LGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGE-LLRASWRC 198 (293)
T ss_pred HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-hCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCch-HHHHHHHh
Confidence 9999999999999999999999999999888 77 677777655422 2222 56799999999987 68999999
Q ss_pred hccCCEEEEeCCCCCC--cccChhhHhccCcEEEEeecC-----C----HHHHHHHHHHHhcCCCccce-EEECCccHHH
Q 018158 269 LKVNGTLSVVGAPEAP--FELPSFPLIFGKRSVKGSMTG-----G----MRETQEMMNVCGKYNITCNI-EVIKPDQINE 336 (360)
Q Consensus 269 l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~-----~----~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~ 336 (360)
++++|+++.+|..... ..+.... +.++..+...... . .+.+..+++++.++++.+.. +.++++++++
T Consensus 199 l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (293)
T cd05195 199 LAPFGRFVEIGKRDILSNSKLGMRP-FLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEID 277 (293)
T ss_pred cccCceEEEeeccccccCCccchhh-hccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHH
Confidence 9999999999865422 1222222 3344454443221 1 23467788889999987665 7899999999
Q ss_pred HHHHHHcCCCceeEEE
Q 018158 337 ALDRLARNDVRYRFVI 352 (360)
Q Consensus 337 a~~~~~~~~~~gkvvi 352 (360)
+++.+.+++..||+++
T Consensus 278 a~~~~~~~~~~~~ivv 293 (293)
T cd05195 278 AFRLMQSGKHIGKVVL 293 (293)
T ss_pred HHHHHhcCCCCceecC
Confidence 9999999888888764
|
Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase |
| >smart00829 PKS_ER Enoylreductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.7e-30 Score=229.05 Aligned_cols=268 Identities=21% Similarity=0.323 Sum_probs=216.7
Q ss_pred EEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCccccc
Q 018158 41 IKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQ 120 (360)
Q Consensus 41 Vkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~ 120 (360)
||+.++++|++|++...|.++ .|.++|||++|+|+++|+.++.|++||+|++
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~------------------------- 53 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMG------------------------- 53 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEE-------------------------
Confidence 899999999999999887653 3578999999999999999999999999986
Q ss_pred ccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHH
Q 018158 121 FTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHV 199 (360)
Q Consensus 121 ~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~ 199 (360)
...|+|++|+.++.+.++++|+++++.+++.+++.+.++|.++....... +|++++|+|+ |.+|++
T Consensus 54 -----------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~--~g~~vlv~g~~~~~g~~ 120 (288)
T smart00829 54 -----------LAPGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLR--PGESVLIHAAAGGVGQA 120 (288)
T ss_pred -----------EcCCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCC--CCCEEEEecCCcHHHHH
Confidence 23589999999999999999999999999999999999999986655544 9999999997 999999
Q ss_pred HHHHHHHcCCeEEEEeCChhHHHHHHHHcCC--CeEeeCccHHHH---Hhc--CCCcCEEEEcCCCcccHHHHHHHhccC
Q 018158 200 AVKFGKAFGHHVTVISTSPSKEKEAKELLGA--DEFILSTNAMQM---QAG--KRTLDFILDTVSAKHSLGPILELLKVN 272 (360)
Q Consensus 200 aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~--~~~v~~~~~~~~---~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~ 272 (360)
++++++.+|++|+++++++++++.+++ +|+ +.++++.+.+.. ... ++++|+++|+++.. ....++++++++
T Consensus 121 ~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~ 198 (288)
T smart00829 121 AIQLAQHLGAEVFATAGSPEKRDFLRE-LGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGE-FLDASLRCLAPG 198 (288)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHH-HHHHHHHhccCC
Confidence 999999999999999999999999977 997 777776554222 111 45799999999864 678899999999
Q ss_pred CEEEEeCCCCC--CcccChhhHhccCcEEEEeecC----C----HHHHHHHHHHHhcCCCccc-eEEECCccHHHHHHHH
Q 018158 273 GTLSVVGAPEA--PFELPSFPLIFGKRSVKGSMTG----G----MRETQEMMNVCGKYNITCN-IEVIKPDQINEALDRL 341 (360)
Q Consensus 273 G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~----~----~~~~~~~~~~l~~~~l~~~-i~~~~~~~~~~a~~~~ 341 (360)
|+++.+|.... ...++... +.++..+.+.... . .+.+..+++++.++++.+. ++.|++++++++++.+
T Consensus 199 g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (288)
T smart00829 199 GRFVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYM 277 (288)
T ss_pred cEEEEEcCcCCccccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHH
Confidence 99999986531 22222222 3445555443321 1 2345677788888888764 4889999999999999
Q ss_pred HcCCCceeEEE
Q 018158 342 ARNDVRYRFVI 352 (360)
Q Consensus 342 ~~~~~~gkvvi 352 (360)
..++..||+++
T Consensus 278 ~~~~~~~~ivv 288 (288)
T smart00829 278 QQGKHIGKVVL 288 (288)
T ss_pred hcCCCcceEeC
Confidence 99887788764
|
Enoylreductase in Polyketide synthases. |
| >cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-28 Score=217.37 Aligned_cols=245 Identities=24% Similarity=0.360 Sum_probs=196.6
Q ss_pred CCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEE
Q 018158 62 ITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEML 141 (360)
Q Consensus 62 ~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~ 141 (360)
+..+|.++|||++|+|+++|+++++|++||+|+. .+.|++|+
T Consensus 17 ~~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~--------------------------------------~~~~~~~~ 58 (277)
T cd08255 17 KLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFC--------------------------------------FGPHAERV 58 (277)
T ss_pred cCcCCcccCcceeEEEEEeCCCCCCCCCCCEEEe--------------------------------------cCCcceEE
Confidence 4458899999999999999999999999999975 14689999
Q ss_pred EeecceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhH
Q 018158 142 VADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSK 220 (360)
Q Consensus 142 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~ 220 (360)
.++.+.++++|+++++.+++.+ +.+.+||+++.. .. ++++++++|+|+|.+|++++++|+.+|++ |+++++++++
T Consensus 59 ~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~~-~~--~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~ 134 (277)
T cd08255 59 VVPANLLVPLPDGLPPERAALT-ALAATALNGVRD-AE--PRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAAR 134 (277)
T ss_pred EcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHHHh-cC--CCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHH
Confidence 9999999999999999998888 789999999864 44 44999999998899999999999999998 9999999999
Q ss_pred HHHHHHHcC-CCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEE
Q 018158 221 EKEAKELLG-ADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSV 299 (360)
Q Consensus 221 ~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i 299 (360)
.+.+++ +| .+.+++.... ...++++|++||+++........+++++++|+++.+|............+..+..++
T Consensus 135 ~~~~~~-~g~~~~~~~~~~~---~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~ 210 (277)
T cd08255 135 RELAEA-LGPADPVAADTAD---EIGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPI 210 (277)
T ss_pred HHHHHH-cCCCccccccchh---hhcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeE
Confidence 997777 99 5665544321 113568999999998766778999999999999999876543111122344455566
Q ss_pred EEeecCC------------HHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcC-CCceeEEE
Q 018158 300 KGSMTGG------------MRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARN-DVRYRFVI 352 (360)
Q Consensus 300 ~~~~~~~------------~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~-~~~gkvvi 352 (360)
.+..... .+.++++++++.++.+.+.+ +.|+++++++|++.++++ ....|+++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 211 RSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred EeecccccccccccccccccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence 6554321 14578899999999987755 899999999999999877 34467653
|
This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-28 Score=234.20 Aligned_cols=292 Identities=16% Similarity=0.186 Sum_probs=239.5
Q ss_pred CCCCCceEEEEeCC---CCCCCeEEEEEeeeecccchhhhhccCCCCCCCC-------CccccccceEEEEecCCCCCCC
Q 018158 19 DPSGKITPYIFKRR---ENGVNDVTIKILYCGICHTDIHHVKNDWGITMYP-------VVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 19 ~~~~~l~~~~~~~p---~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p-------~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
+.-..++|.+.|.. +..++.=+.-|-|++||..|++...|+.++.-.| .++|-|++|+ .+
T Consensus 1424 GDlsSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~ 1493 (2376)
T KOG1202|consen 1424 GDLSSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DA 1493 (2376)
T ss_pred ccccceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cC
Confidence 33346777776655 3467777999999999999999999988754333 5789999886 45
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
-|.||+++. ..-++++.+.++.+++|.+|++..+++|++.||.|.
T Consensus 1494 ~GrRvM~mv-----------------------------------pAksLATt~l~~rd~lWevP~~WTleeAstVP~VYs 1538 (2376)
T KOG1202|consen 1494 SGRRVMGMV-----------------------------------PAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYS 1538 (2376)
T ss_pred CCcEEEEee-----------------------------------ehhhhhhhhhcchhhhhhCCcccchhhcccCceEee
Confidence 699999754 346788999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC---CCeEeeCccHHHH--
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG---ADEFILSTNAMQM-- 242 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g---~~~~v~~~~~~~~-- 242 (360)
|||++|...+..+ +|+++||+++ |++|++||.+|...|++|+.++.+.+++++++++|+ ..++-|+++.+..
T Consensus 1539 TaYYALVvRG~mk--kGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~ 1616 (2376)
T KOG1202|consen 1539 TAYYALVVRGQMK--KGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQH 1616 (2376)
T ss_pred eehhhhhhhcccc--CCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHH
Confidence 9999998877755 9999999966 999999999999999999999999999999999887 4566676665433
Q ss_pred ---HhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccC-hhhHhccCcEEEEeecC-----CHHHHHHH
Q 018158 243 ---QAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELP-SFPLIFGKRSVKGSMTG-----GMRETQEM 313 (360)
Q Consensus 243 ---~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~i~~~~~~-----~~~~~~~~ 313 (360)
.+.++|+|+|+|....+ .++..++||+.+||+..+|...-....+ ....+.++.+++|.... ..++++++
T Consensus 1617 vl~~T~GrGVdlVLNSLaeE-kLQASiRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev 1695 (2376)
T KOG1202|consen 1617 VLWHTKGRGVDLVLNSLAEE-KLQASIRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREV 1695 (2376)
T ss_pred HHHHhcCCCeeeehhhhhHH-HHHHHHHHHHhcCeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHH
Confidence 22389999999999776 5799999999999999999765333222 23457789999988763 45667777
Q ss_pred HHHHhcC----CCccc-eEEECCccHHHHHHHHHcCCCceeEEEecCCCc
Q 018158 314 MNVCGKY----NITCN-IEVIKPDQINEALDRLARNDVRYRFVIDIAGGA 358 (360)
Q Consensus 314 ~~~l~~~----~l~~~-i~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~~ 358 (360)
..++++| .++|. .++|+-.++++||++|.+++..||+|+++..+.
T Consensus 1696 ~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr~eE 1745 (2376)
T KOG1202|consen 1696 AALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVRAEE 1745 (2376)
T ss_pred HHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEcccc
Confidence 7777654 55664 489999999999999999999999999996654
|
|
| >KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.8e-26 Score=193.06 Aligned_cols=291 Identities=15% Similarity=0.107 Sum_probs=222.0
Q ss_pred CceEEE--EeC-CCCCCCeEEEEEeeeecccchhhhhccCCCC-----CCCCCccccccceEEEEecCCCCCCCCCCEEE
Q 018158 23 KITPYI--FKR-RENGVNDVTIKILYCGICHTDIHHVKNDWGI-----TMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94 (360)
Q Consensus 23 ~l~~~~--~~~-p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-----~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~ 94 (360)
.+.+++ +++ .+++.++||||.++-+.-|.-...+....+. ..+.-+.-..++|+|++. +..+|++||.|.
T Consensus 21 d~~~~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v~ 98 (343)
T KOG1196|consen 21 DFEFTTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLVW 98 (343)
T ss_pred cceeeeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEec--CCCCCCcCceEE
Confidence 444443 443 3568999999999999876543322211111 112222223789999995 457899999997
Q ss_pred eccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecce--eEECCC--CCCccccc-cccchhhh
Q 018158 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRF--VVHVPE--NIAMDAAA-PLLCAGIT 169 (360)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~--~~~iP~--~~~~~~aa-~l~~~~~t 169 (360)
.. -+|.+|..++... .++||. ++++.... .+..++.|
T Consensus 99 g~--------------------------------------~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glT 140 (343)
T KOG1196|consen 99 GI--------------------------------------VGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLT 140 (343)
T ss_pred Ee--------------------------------------ccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhH
Confidence 52 3799999887653 555543 44444333 67788999
Q ss_pred hhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhc---
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAG--- 245 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~--- 245 (360)
||..+.++...+ +|++++|-|| |++|+++.|+||.+|++|+.++.++|+...++.+||.+..+||+++.....+
T Consensus 141 Ay~Gf~ei~~pk--~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r 218 (343)
T KOG1196|consen 141 AYAGFYEICSPK--KGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKR 218 (343)
T ss_pred HHHHHHHhcCCC--CCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHH
Confidence 999999988866 9999999999 9999999999999999999999999999999998999999999998443332
Q ss_pred --CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC---Ccc--c-ChhhHhccCcEEEEeecCCH-----HHHHH
Q 018158 246 --KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA---PFE--L-PSFPLIFGKRSVKGSMTGGM-----RETQE 312 (360)
Q Consensus 246 --~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~--~-~~~~~~~~~~~i~~~~~~~~-----~~~~~ 312 (360)
..++|+.||.+|+. .+...+..|+..||++.+|..+. ..+ + ....++.|++++.++...+. +-++.
T Consensus 219 ~~P~GIDiYfeNVGG~-~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~ 297 (343)
T KOG1196|consen 219 CFPEGIDIYFENVGGK-MLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDF 297 (343)
T ss_pred hCCCcceEEEeccCcH-HHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHH
Confidence 68999999999998 57999999999999999998652 111 1 23457889999999776442 33466
Q ss_pred HHHHHhcCCCccceE-EECCccHHHHHHHHHcCCCceeEEEecCC
Q 018158 313 MMNVCGKYNITCNIE-VIKPDQINEALDRLARNDVRYRFVIDIAG 356 (360)
Q Consensus 313 ~~~~l~~~~l~~~i~-~~~~~~~~~a~~~~~~~~~~gkvvi~~~~ 356 (360)
+..++.+|+++..-. .-.|+..++||.-|.+++..||.++.+..
T Consensus 298 l~~~ikegKI~y~edi~~Glen~P~A~vglf~GkNvGKqiv~va~ 342 (343)
T KOG1196|consen 298 LLPYIKEGKITYVEDIADGLENGPSALVGLFHGKNVGKQLVKVAR 342 (343)
T ss_pred HHHHHhcCceEEehhHHHHHhccHHHHHHHhccCcccceEEEeec
Confidence 677888999976643 34699999999999999999999999865
|
|
| >PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=8e-24 Score=162.15 Aligned_cols=108 Identities=34% Similarity=0.619 Sum_probs=92.8
Q ss_pred CCeEEEEEeeeecccchhhhhcc-CCCCCCCCCccccccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCC
Q 018158 36 VNDVTIKILYCGICHTDIHHVKN-DWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQEN 114 (360)
Q Consensus 36 ~~evlVkv~~~~i~~~D~~~~~g-~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~ 114 (360)
|+||||||++++||++|+++++| ......+|.++|||++|+|+++|+++++|++||+|++.+.. .|+.|.+|..+.++
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~c~~c~~~~~~ 79 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNI-GCGECEYCLSGRPN 79 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEE-ETSSSHHHHTTTGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeeccc-CccCchhhcCCccc
Confidence 79999999999999999999999 34467889999999999999999999999999999885555 59999999999999
Q ss_pred CcccccccccccccCCCccccceeeEEEeecceeEEC
Q 018158 115 YCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV 151 (360)
Q Consensus 115 ~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~i 151 (360)
+|++.... +...+|+|+||+.+++++++|+
T Consensus 80 ~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 80 LCPNPEVL-------GLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp GTTTBEET-------TTSSTCSSBSEEEEEGGGEEEE
T ss_pred cCCCCCEe-------EcCCCCcccCeEEEehHHEEEC
Confidence 99875432 2247899999999999999985
|
1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A .... |
| >PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.9e-17 Score=128.77 Aligned_cols=124 Identities=29% Similarity=0.463 Sum_probs=111.2
Q ss_pred hHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---HHhc--CCCcCEEEEcCCCcccHHHHHHHh
Q 018158 195 GLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ---MQAG--KRTLDFILDTVSAKHSLGPILELL 269 (360)
Q Consensus 195 ~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~--~~~~d~vid~~g~~~~~~~~~~~l 269 (360)
++|++++|+||.+|++|+++++++++++.+++ +|+++++++++.+. ++.. +.++|++|||+|....++.++.++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~-~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l 79 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKE-LGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLL 79 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH-TTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHE
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHh-hcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHh
Confidence 58999999999999999999999999999999 99999999888632 3333 357999999999888899999999
Q ss_pred ccCCEEEEeCCCC-CCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhc
Q 018158 270 KVNGTLSVVGAPE-APFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGK 319 (360)
Q Consensus 270 ~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~ 319 (360)
+++|+++.+|... ...+++...++.+++++.++....+++++++++++++
T Consensus 80 ~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la~ 130 (130)
T PF00107_consen 80 RPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLAQ 130 (130)
T ss_dssp EEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH-
T ss_pred ccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhcC
Confidence 9999999999988 6778889999999999999999999999999998864
|
1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: |
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.2e-13 Score=128.15 Aligned_cols=175 Identities=14% Similarity=0.060 Sum_probs=136.6
Q ss_pred hchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcC
Q 018158 171 FCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLD 250 (360)
Q Consensus 171 ~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d 250 (360)
|.++.+.... .-+|++|+|+|+|++|+.+++.++.+|++|+++++++.|+..++. +|++.+ +. . +.-+++|
T Consensus 189 ~~~i~r~t~~-~l~GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~-~G~~~~-~~--~----e~v~~aD 259 (413)
T cd00401 189 IDGIKRATDV-MIAGKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICALQAAM-EGYEVM-TM--E----EAVKEGD 259 (413)
T ss_pred HHHHHHhcCC-CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHh-cCCEEc-cH--H----HHHcCCC
Confidence 4454443222 238999999999999999999999999999999999999999988 998433 21 1 1235789
Q ss_pred EEEEcCCCcccHHHH-HHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHH-HHH--HHHHHHhcCCC-cc-
Q 018158 251 FILDTVSAKHSLGPI-LELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMR-ETQ--EMMNVCGKYNI-TC- 324 (360)
Q Consensus 251 ~vid~~g~~~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~--~~~~~l~~~~l-~~- 324 (360)
++|+|+|....+... ++.++++|+++.+|.. ...++...+..+++++.++.....+ +++ +.+.++.+|++ +.
T Consensus 260 VVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~ 337 (413)
T cd00401 260 IFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLG 337 (413)
T ss_pred EEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCc
Confidence 999999988777765 9999999999999964 4567778888889999988776433 455 78999999998 32
Q ss_pred -ce-EE-----ECCc-cHHHHHHHHHcCCCc-eeEEEecCC
Q 018158 325 -NI-EV-----IKPD-QINEALDRLARNDVR-YRFVIDIAG 356 (360)
Q Consensus 325 -~i-~~-----~~~~-~~~~a~~~~~~~~~~-gkvvi~~~~ 356 (360)
.+ |. ++|+ ++.++++.+.++... -|+++.+.+
T Consensus 338 ~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~~ 378 (413)
T cd00401 338 CATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPKK 378 (413)
T ss_pred ccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCHH
Confidence 33 66 8899 999999999886543 477776654
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.4e-14 Score=110.76 Aligned_cols=117 Identities=26% Similarity=0.330 Sum_probs=77.8
Q ss_pred cCCCeEeeCccHHHHHhcCCCcCEEEEcCC--CcccHHHHHHHhccCCEEEEeCCCCCCcccChhhH--hccCcEEEEee
Q 018158 228 LGADEFILSTNAMQMQAGKRTLDFILDTVS--AKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPL--IFGKRSVKGSM 303 (360)
Q Consensus 228 ~g~~~~v~~~~~~~~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~--~~~~~~i~~~~ 303 (360)
||+++++||++.+. ....++|+|||++| ....+..+.+++ ++|+++.++. ....... ...........
T Consensus 1 LGAd~vidy~~~~~--~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-----~~~~~~~~~~~~~~~~~~~~ 72 (127)
T PF13602_consen 1 LGADEVIDYRDTDF--AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-----DLPSFARRLKGRSIRYSFLF 72 (127)
T ss_dssp CT-SEEEETTCSHH--HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-----HHHHHHHHHHCHHCEEECCC
T ss_pred CCcCEEecCCCccc--cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-----cccchhhhhcccceEEEEEE
Confidence 68999999996544 44789999999999 544446666777 9999999984 1111111 11222222222
Q ss_pred c-C----CHHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEE
Q 018158 304 T-G----GMRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 304 ~-~----~~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi 352 (360)
. . ..+.++.+.+++++|++++++ ++||++++.+|++.+++++..||+|+
T Consensus 73 ~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 73 SVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp -H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred ecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 1 1 234589999999999999999 79999999999999999999999996
|
|
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=7e-12 Score=119.24 Aligned_cols=141 Identities=13% Similarity=0.199 Sum_probs=108.7
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccH-------------HHH------
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNA-------------MQM------ 242 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~-------------~~~------ 242 (360)
.++++|+|+|+|++|+++++.|+.+|++|++++.++++++.+++ +|++.+ ++..+. +..
T Consensus 163 ~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-lGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~ 241 (509)
T PRK09424 163 VPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-MGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL 241 (509)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence 38999999999999999999999999999999999999999999 999855 544321 000
Q ss_pred -HhcCCCcCEEEEcCCCcc-----c-HHHHHHHhccCCEEEEeCCCC-CC--cccChhhHhc-cCcEEEEeecCCHHHHH
Q 018158 243 -QAGKRTLDFILDTVSAKH-----S-LGPILELLKVNGTLSVVGAPE-AP--FELPSFPLIF-GKRSVKGSMTGGMRETQ 311 (360)
Q Consensus 243 -~~~~~~~d~vid~~g~~~-----~-~~~~~~~l~~~G~~v~~g~~~-~~--~~~~~~~~~~-~~~~i~~~~~~~~~~~~ 311 (360)
....+++|++|+|++.+. . .+++++.++++|+++++|... +. .+.+...++. +++++.|......+...
T Consensus 242 ~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~p~ 321 (509)
T PRK09424 242 FAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRLPT 321 (509)
T ss_pred HHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhHHH
Confidence 111267999999998632 4 499999999999999999853 33 4454556665 89999998765543344
Q ss_pred HHHHHHhcCCCcc
Q 018158 312 EMMNVCGKYNITC 324 (360)
Q Consensus 312 ~~~~~l~~~~l~~ 324 (360)
++.+++.++.+..
T Consensus 322 ~As~lla~~~i~l 334 (509)
T PRK09424 322 QSSQLYGTNLVNL 334 (509)
T ss_pred HHHHHHHhCCccH
Confidence 5888888877643
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.1e-07 Score=88.64 Aligned_cols=120 Identities=16% Similarity=0.224 Sum_probs=87.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe-eCcc-------------HHH-------H
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI-LSTN-------------AMQ-------M 242 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~-------------~~~-------~ 242 (360)
++++++|+|+|.+|++++++++.+|++|+++++++++++.+++ +|++.+. +..+ .+. .
T Consensus 163 p~akVlViGaG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~ 241 (511)
T TIGR00561 163 PPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELF 241 (511)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccccceeecCHHHHHHHHHHH
Confidence 6789999999999999999999999999999999999999998 9987632 2211 000 1
Q ss_pred HhcCCCcCEEEEcC---CCcc---cHHHHHHHhccCCEEEEeCCCCC-CcccCh-hhHh--ccCcEEEEeec
Q 018158 243 QAGKRTLDFILDTV---SAKH---SLGPILELLKVNGTLSVVGAPEA-PFELPS-FPLI--FGKRSVKGSMT 304 (360)
Q Consensus 243 ~~~~~~~d~vid~~---g~~~---~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~-~~~~--~~~~~i~~~~~ 304 (360)
.+..+++|++|+|+ |... ..++.++.|++|+.+++++...+ .+.... ...+ .+++.+.+...
T Consensus 242 ~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn~E~t~p~~~~~~~~GV~~~gv~n 313 (511)
T TIGR00561 242 AAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGNCEYTKPGEVYTTENQVKVIGYTD 313 (511)
T ss_pred HHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCCEEEecCceEEEecCCEEEEeeCC
Confidence 22257899999999 6543 46788999999999999976543 222211 1112 23477777554
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.65 E-value=3.6e-07 Score=81.68 Aligned_cols=166 Identities=14% Similarity=0.190 Sum_probs=100.1
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHH---cCCCeEee-CccHHHHHhcCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKEL---LGADEFIL-STNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~---~g~~~~v~-~~~~~~~~~~~~~~d~vid~ 255 (360)
++++++||.+|+|+ |..++++++..|. +|++++.+++.++.+++. +|...+.. ..+..........+|+|+..
T Consensus 75 ~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~d~~~l~~~~~~fD~Vi~~ 153 (272)
T PRK11873 75 LKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRLGEIEALPVADNSVDVIISN 153 (272)
T ss_pred CCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEcchhhCCCCCCceeEEEEc
Confidence 34999999999987 8888888888775 699999999988888763 33322211 11111111113579999854
Q ss_pred C------CCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc---ce
Q 018158 256 V------SAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC---NI 326 (360)
Q Consensus 256 ~------g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~---~i 326 (360)
. .....+..+.+.|++||+++..+..... ..+ ....+...+.+..........++.+++.+..+.. ..
T Consensus 154 ~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~e~~~~l~~aGf~~v~i~~ 230 (272)
T PRK11873 154 CVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG-ELP--EEIRNDAELYAGCVAGALQEEEYLAMLAEAGFVDITIQP 230 (272)
T ss_pred CcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC-CCC--HHHHHhHHHHhccccCCCCHHHHHHHHHHCCCCceEEEe
Confidence 3 1234588999999999999987654322 111 1111111122111111123445556666544432 22
Q ss_pred -EEECCccHHHHHHHH--HcCCCceeEE
Q 018158 327 -EVIKPDQINEALDRL--ARNDVRYRFV 351 (360)
Q Consensus 327 -~~~~~~~~~~a~~~~--~~~~~~gkvv 351 (360)
..++++++.++++.+ .++...++.+
T Consensus 231 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 258 (272)
T PRK11873 231 KREYRIPDAREFLEDWGIAPGRQLDGYI 258 (272)
T ss_pred ccceecccHHHHHHHhccccccccCceE
Confidence 568899999999988 5555444444
|
|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=3.8e-07 Score=85.26 Aligned_cols=109 Identities=17% Similarity=0.201 Sum_probs=83.1
Q ss_pred hhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCC
Q 018158 168 ITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKR 247 (360)
Q Consensus 168 ~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~ 247 (360)
..+|.++...... .-.|++++|+|.|.+|..+++.++.+|++|+++++++.+...+.. .|.. +.+. .+...
T Consensus 196 ~s~~~ai~rat~~-~l~Gk~VlViG~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~-~G~~-v~~l------~eal~ 266 (425)
T PRK05476 196 ESLLDGIKRATNV-LIAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQAAM-DGFR-VMTM------EEAAE 266 (425)
T ss_pred hhhHHHHHHhccC-CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHh-cCCE-ecCH------HHHHh
Confidence 3346666555222 127999999999999999999999999999999999888766666 6654 3221 12235
Q ss_pred CcCEEEEcCCCcccHH-HHHHHhccCCEEEEeCCCCCCc
Q 018158 248 TLDFILDTVSAKHSLG-PILELLKVNGTLSVVGAPEAPF 285 (360)
Q Consensus 248 ~~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~ 285 (360)
++|++|+++|....+. ..+..|++++.++++|.....+
T Consensus 267 ~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~Ei 305 (425)
T PRK05476 267 LGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDNEI 305 (425)
T ss_pred CCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCCcc
Confidence 7999999999876665 6889999999999999876433
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.4e-06 Score=78.56 Aligned_cols=111 Identities=15% Similarity=0.143 Sum_probs=85.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
.+++++|+|.|.+|+.+++.++.+|++|++++++.++..++++ +|.+.+ .. +...+.-.++|+||+|++......
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~-~G~~~~-~~---~~l~~~l~~aDiVI~t~p~~~i~~ 225 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGANVTVGARKSAHLARITE-MGLSPF-HL---SELAEEVGKIDIIFNTIPALVLTK 225 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCeee-cH---HHHHHHhCCCCEEEECCChhhhhH
Confidence 5899999999999999999999999999999999988888887 886533 21 122333467999999997654446
Q ss_pred HHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEE
Q 018158 264 PILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKG 301 (360)
Q Consensus 264 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~ 301 (360)
..++.+++++.+++++...+...+ ...-.+++...+
T Consensus 226 ~~l~~~~~g~vIIDla~~pggtd~--~~a~~~Gv~~~~ 261 (296)
T PRK08306 226 EVLSKMPPEALIIDLASKPGGTDF--EYAEKRGIKALL 261 (296)
T ss_pred HHHHcCCCCcEEEEEccCCCCcCe--eehhhCCeEEEE
Confidence 778889999999999987766554 233345556654
|
|
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=98.44 E-value=3.1e-06 Score=79.53 Aligned_cols=103 Identities=19% Similarity=0.136 Sum_probs=79.7
Q ss_pred hchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcC
Q 018158 171 FCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLD 250 (360)
Q Consensus 171 ~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d 250 (360)
+.++.+...+ .-.|++++|+|.|.+|..+++.++.+|++|+++++++.+...+.. .|... ++ . .+.-...|
T Consensus 241 ~d~i~r~t~i-~LaGKtVvViGyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~-~G~~v-v~---l---eEal~~AD 311 (477)
T PLN02494 241 PDGLMRATDV-MIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQALM-EGYQV-LT---L---EDVVSEAD 311 (477)
T ss_pred HHHHHHhcCC-ccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHh-cCCee-cc---H---HHHHhhCC
Confidence 4454444332 127999999999999999999999999999999999887767666 67542 21 1 12234689
Q ss_pred EEEEcCCCcccH-HHHHHHhccCCEEEEeCCCC
Q 018158 251 FILDTVSAKHSL-GPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 251 ~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~ 282 (360)
+++++.|....+ ...+..|++++.++++|...
T Consensus 312 VVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~ 344 (477)
T PLN02494 312 IFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD 344 (477)
T ss_pred EEEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence 999999987654 78999999999999999864
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=98.42 E-value=3.2e-06 Score=78.63 Aligned_cols=98 Identities=17% Similarity=0.295 Sum_probs=74.7
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCC---C--c
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVS---A--K 259 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g---~--~ 259 (360)
+.+++|+|+|.+|+.+++.++.+|++|++++++.++.+.+.+.++........+.+.+.+.-.++|++|+|++ . .
T Consensus 167 ~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~~~p 246 (370)
T TIGR00518 167 PGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGAKAP 246 (370)
T ss_pred CceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCCCCC
Confidence 4558999999999999999999999999999999988888775665322333333344444568999999983 2 1
Q ss_pred c-cHHHHHHHhccCCEEEEeCCCC
Q 018158 260 H-SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 260 ~-~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
. .....++.+++++.+++++...
T Consensus 247 ~lit~~~l~~mk~g~vIvDva~d~ 270 (370)
T TIGR00518 247 KLVSNSLVAQMKPGAVIVDVAIDQ 270 (370)
T ss_pred cCcCHHHHhcCCCCCEEEEEecCC
Confidence 1 1377888999999999998654
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.2e-06 Score=79.80 Aligned_cols=91 Identities=19% Similarity=0.242 Sum_probs=74.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
.|++|+|+|.|.+|+.+++.++.+|++|+++++++.+...+.. .|.. +.+. . +.-.+.|++|+++|....+.
T Consensus 194 ~Gk~VvViG~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~-~G~~-v~~l--e----eal~~aDVVItaTG~~~vI~ 265 (406)
T TIGR00936 194 AGKTVVVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEAAM-DGFR-VMTM--E----EAAKIGDIFITATGNKDVIR 265 (406)
T ss_pred CcCEEEEECCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHh-cCCE-eCCH--H----HHHhcCCEEEECCCCHHHHH
Confidence 8999999999999999999999999999999999887766666 6753 3221 1 12356899999999887676
Q ss_pred -HHHHHhccCCEEEEeCCCC
Q 018158 264 -PILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 264 -~~~~~l~~~G~~v~~g~~~ 282 (360)
..+..+++++.++.+|...
T Consensus 266 ~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 266 GEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred HHHHhcCCCCcEEEEECCCC
Confidence 4889999999999998764
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=6.9e-07 Score=88.18 Aligned_cols=118 Identities=19% Similarity=0.186 Sum_probs=74.4
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCC---------------------hhHHHHHHHHcCCCeEeeCcc-HH
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTS---------------------PSKEKEAKELLGADEFILSTN-AM 240 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~---------------------~~~~~~~~~~~g~~~~v~~~~-~~ 240 (360)
.+|++|+|+|+|+.|+++++.++..|++|++++.. ..+++.+++ +|++..++... .+
T Consensus 135 ~~g~~V~VIGaGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~-~Gv~~~~~~~~~~~ 213 (564)
T PRK12771 135 DTGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILD-LGVEVRLGVRVGED 213 (564)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHH-CCCEEEeCCEECCc
Confidence 48999999999999999999999999999999853 345677777 99876665433 11
Q ss_pred -HHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEe
Q 018158 241 -QMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGS 302 (360)
Q Consensus 241 -~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~ 302 (360)
.......++|+||+++|........+.....+|.+..++......... .....+++.+.|.
T Consensus 214 ~~~~~~~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~~~l~~~~~~~-~~~~gk~v~ViGg 275 (564)
T PRK12771 214 ITLEQLEGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVDFLRAVGEGE-PPFLGKRVVVIGG 275 (564)
T ss_pred CCHHHHHhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHHHHHHHhhccC-CcCCCCCEEEECC
Confidence 112224579999999997644333333344445554443221111111 1233456666664
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=98.19 E-value=3e-07 Score=86.93 Aligned_cols=160 Identities=13% Similarity=0.182 Sum_probs=101.7
Q ss_pred ccccccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecce
Q 018158 68 VPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRF 147 (360)
Q Consensus 68 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~ 147 (360)
.-|.|+++.+.+|++++++.-+|+- .. |+-|-+| |+.|..... .|...++.|++++.++. .
T Consensus 89 ~~~~~a~~hl~~Va~GldS~V~GE~-----qI--~gQvk~a----~~~a~~~~~-------~g~~l~~lf~~a~~~~k-~ 149 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDSMVVGET-----QI--LGQVKNA----YKVAQEEKT-------VGKVLERLFQKAFSVGK-R 149 (417)
T ss_pred cCchHHHHHHHHHHhhhhhhhcCCh-----HH--HHHHHHH----HHHHHHcCC-------chHHHHHHHHHHHHHhh-h
Confidence 4689999999999999877433332 22 5555555 555554322 12245688999988775 3
Q ss_pred eEE---C-CCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHH
Q 018158 148 VVH---V-PENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEK 222 (360)
Q Consensus 148 ~~~---i-P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~ 222 (360)
+.. | +..+|...+| .-.+....+. .++++++|+|+|.+|..+++.++..| .+|+++.++.++..
T Consensus 150 vr~~t~i~~~~vSv~~~A--------v~la~~~~~~---l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~ 218 (417)
T TIGR01035 150 VRTETDISAGAVSISSAA--------VELAERIFGS---LKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAE 218 (417)
T ss_pred hhhhcCCCCCCcCHHHHH--------HHHHHHHhCC---ccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHH
Confidence 222 3 2233322221 0111222221 27899999999999999999999999 47999999988866
Q ss_pred HHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 223 EAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 223 ~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
.+.+.+|.. .+... ...+.-.++|+||+|++....
T Consensus 219 ~la~~~g~~-~i~~~---~l~~~l~~aDvVi~aT~s~~~ 253 (417)
T TIGR01035 219 DLAKELGGE-AVKFE---DLEEYLAEADIVISSTGAPHP 253 (417)
T ss_pred HHHHHcCCe-EeeHH---HHHHHHhhCCEEEECCCCCCc
Confidence 555547764 33322 222334579999999987644
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=98.17 E-value=6e-05 Score=67.57 Aligned_cols=110 Identities=15% Similarity=0.143 Sum_probs=81.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
.|++++|+|.|.+|.+++..++.+|++|++++++.++...+.+ +|...+ .. +...+.-.++|+++++++....-.
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~-~g~~~~-~~---~~l~~~l~~aDiVint~P~~ii~~ 224 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGARVFVGARSSADLARITE-MGLIPF-PL---NKLEEKVAEIDIVINTIPALVLTA 224 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-CCCeee-cH---HHHHHHhccCCEEEECCChHHhCH
Confidence 5789999999999999999999999999999999988777766 675322 21 122333468999999997653335
Q ss_pred HHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEE
Q 018158 264 PILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVK 300 (360)
Q Consensus 264 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~ 300 (360)
..++.++++..+++++..++..++ ...-..++...
T Consensus 225 ~~l~~~k~~aliIDlas~Pg~tdf--~~Ak~~G~~a~ 259 (287)
T TIGR02853 225 DVLSKLPKHAVIIDLASKPGGTDF--EYAKKRGIKAL 259 (287)
T ss_pred HHHhcCCCCeEEEEeCcCCCCCCH--HHHHHCCCEEE
Confidence 677889999899999887766555 33334444444
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.7e-05 Score=74.73 Aligned_cols=91 Identities=20% Similarity=0.272 Sum_probs=74.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
.|++++|+|.|.+|..+++.++.+|++|+++++++.+...+.. .|...+ + +.+.-+..|+++.++|....+.
T Consensus 253 aGKtVgVIG~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~-~G~~~~-~------leell~~ADIVI~atGt~~iI~ 324 (476)
T PTZ00075 253 AGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQAAM-EGYQVV-T------LEDVVETADIFVTATGNKDIIT 324 (476)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHh-cCceec-c------HHHHHhcCCEEEECCCcccccC
Confidence 7999999999999999999999999999999988777655555 565322 1 1223457999999998776664
Q ss_pred -HHHHHhccCCEEEEeCCCC
Q 018158 264 -PILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 264 -~~~~~l~~~G~~v~~g~~~ 282 (360)
..++.|++++.++++|...
T Consensus 325 ~e~~~~MKpGAiLINvGr~d 344 (476)
T PTZ00075 325 LEHMRRMKNNAIVGNIGHFD 344 (476)
T ss_pred HHHHhccCCCcEEEEcCCCc
Confidence 8999999999999998764
|
|
| >PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.11 E-value=2.5e-05 Score=68.81 Aligned_cols=134 Identities=19% Similarity=0.245 Sum_probs=83.4
Q ss_pred eeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEe
Q 018158 137 YSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVIS 215 (360)
Q Consensus 137 ~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~ 215 (360)
|.+|.. +...++++++++++..+. -+.+.. .+..+... ..++++||-+|+|. |..++.+++ .|+ +|++++
T Consensus 79 ~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~~~----~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giD 149 (250)
T PRK00517 79 WEDPPD-PDEINIELDPGMAFGTGT-HPTTRL-CLEALEKL----VLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVD 149 (250)
T ss_pred CcCCCC-CCeEEEEECCCCccCCCC-CHHHHH-HHHHHHhh----cCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEE
Confidence 344433 667789999998887654 221211 12233321 23889999999987 887776655 566 599999
Q ss_pred CChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCc---ccHHHHHHHhccCCEEEEeCCCC
Q 018158 216 TSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAK---HSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 216 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.++...+.+++.+....+-+.. ........+|+|+...... ..++.+.+.|+++|+++..|...
T Consensus 150 is~~~l~~A~~n~~~~~~~~~~---~~~~~~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~~ 216 (250)
T PRK00517 150 IDPQAVEAARENAELNGVELNV---YLPQGDLKADVIVANILANPLLELAPDLARLLKPGGRLILSGILE 216 (250)
T ss_pred CCHHHHHHHHHHHHHcCCCceE---EEccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECcH
Confidence 9999888877743211110000 0000011699998655432 23568889999999999887543
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=98.10 E-value=2.4e-07 Score=87.80 Aligned_cols=163 Identities=15% Similarity=0.209 Sum_probs=99.6
Q ss_pred ccccccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecce
Q 018158 68 VPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRF 147 (360)
Q Consensus 68 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~ 147 (360)
.-|||+++.+.+|+++.++.-+|+.= -|.+|+ +.+..|..... .|...++.|++.+.++
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE~q----------IlgQvk-~a~~~a~~~g~-------~g~~l~~lf~~a~~~~--- 149 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGEPQ----------ILGQVK-DAYALAQEAGT-------VGTILNRLFQKAFSVA--- 149 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCChH----------HHHHHH-HHHHHHHHcCC-------chHHHHHHHHHHHHHH---
Confidence 45999999999999998774444432 256666 33444433211 0113345565554443
Q ss_pred eEECCCCCCccccccccchhhhhhchhhccCCC-CCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHH
Q 018158 148 VVHVPENIAMDAAAPLLCAGITVFCPMKDNNLI-DSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAK 225 (360)
Q Consensus 148 ~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~-~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~ 225 (360)
+.+..+.+. ...+...+++++...... .-.++++++|+|+|.+|.++++.++..|+ +|+++.++.++...+.
T Consensus 150 -----k~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la 223 (423)
T PRK00045 150 -----KRVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELA 223 (423)
T ss_pred -----hhHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHH
Confidence 333322221 111233335555433211 01278999999999999999999999998 7999999998877555
Q ss_pred HHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 226 ELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 226 ~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
+.+|.+ +++.. .....-.++|+||+|+|....
T Consensus 224 ~~~g~~-~~~~~---~~~~~l~~aDvVI~aT~s~~~ 255 (423)
T PRK00045 224 EEFGGE-AIPLD---ELPEALAEADIVISSTGAPHP 255 (423)
T ss_pred HHcCCc-EeeHH---HHHHHhccCCEEEECCCCCCc
Confidence 548854 33332 222334579999999987643
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.10 E-value=3.4e-05 Score=77.93 Aligned_cols=135 Identities=16% Similarity=0.147 Sum_probs=90.5
Q ss_pred cceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEE
Q 018158 135 GGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTV 213 (360)
Q Consensus 135 g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~ 213 (360)
-++++|..+++..++.+ +.++.+++... +.......+|+++||+|+ |++|..+++.+...|++|++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~------------~~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl 451 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQ------------RMPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVL 451 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhh------------cCCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEE
Confidence 45678888888777777 66666665421 110111226899999998 99999999999999999999
Q ss_pred EeCChhHHHHHHHHcCC--C---eEeeCccHHHHHhc-------CCCcCEEEEcCCCc----------------------
Q 018158 214 ISTSPSKEKEAKELLGA--D---EFILSTNAMQMQAG-------KRTLDFILDTVSAK---------------------- 259 (360)
Q Consensus 214 ~~~~~~~~~~~~~~~g~--~---~~v~~~~~~~~~~~-------~~~~d~vid~~g~~---------------------- 259 (360)
++++.++.+.+.+.++. . ...|..+.+..... ..++|++|+++|..
T Consensus 452 ~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~ 531 (681)
T PRK08324 452 ADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT 531 (681)
T ss_pred EeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 99999887776664543 1 11244443332221 34799999999831
Q ss_pred ---ccHHHHHHHhcc---CCEEEEeCCCC
Q 018158 260 ---HSLGPILELLKV---NGTLSVVGAPE 282 (360)
Q Consensus 260 ---~~~~~~~~~l~~---~G~~v~~g~~~ 282 (360)
..++.++..+++ +|+++.++...
T Consensus 532 g~~~l~~~~~~~l~~~~~~g~iV~vsS~~ 560 (681)
T PRK08324 532 GHFLVAREAVRIMKAQGLGGSIVFIASKN 560 (681)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEECCcc
Confidence 113444666665 68999998754
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=98.10 E-value=9.1e-06 Score=73.94 Aligned_cols=111 Identities=16% Similarity=0.194 Sum_probs=78.0
Q ss_pred ceeEECCCCCCccccccccchhhhhhchhhccCCCC-CCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHH
Q 018158 146 RFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLID-SPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKE 223 (360)
Q Consensus 146 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~-~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~ 223 (360)
...+++|+.+..+.++... +...++.++....... --++++|+|+|+|.+|..+++.++..|+ +|++++++.++...
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 4577888988888777554 3344455554433210 0168999999999999999999998876 69999999888766
Q ss_pred HHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 224 AKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 224 ~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
+.+++|.. +++..+ ..+.-..+|+||.|++....
T Consensus 218 la~~~g~~-~~~~~~---~~~~l~~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPLDE---LLELLNEADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeHHH---HHHHHhcCCEEEECCCCCch
Confidence 65658873 333322 22334568999999998754
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.08 E-value=6.8e-05 Score=63.98 Aligned_cols=75 Identities=15% Similarity=0.203 Sum_probs=59.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC----CeEeeCccHHH-------HHhcCCCcCE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA----DEFILSTNAMQ-------MQAGKRTLDF 251 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~----~~~v~~~~~~~-------~~~~~~~~d~ 251 (360)
.++.++|+|| +++|.+.++.+...|++|+.++|..++++.++.+++. -..+|-.+.+. ....-..+|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 5688999999 9999999999999999999999999999999998983 12234444422 1222567999
Q ss_pred EEEcCCC
Q 018158 252 ILDTVSA 258 (360)
Q Consensus 252 vid~~g~ 258 (360)
+++..|.
T Consensus 85 LvNNAGl 91 (246)
T COG4221 85 LVNNAGL 91 (246)
T ss_pred EEecCCC
Confidence 9999984
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.98 E-value=2.4e-05 Score=61.97 Aligned_cols=95 Identities=17% Similarity=0.291 Sum_probs=66.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCC--eEeeCccHHHHHhcCCCcCEEEEcCCCcc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGAD--EFILSTNAMQMQAGKRTLDFILDTVSAKH 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~~~~~~~~~~d~vid~~g~~~ 260 (360)
.+++++|+|+|++|.+++..+...|++ |+++.|+.++.+.+.+.++.. ..+...+. ...-..+|++|+|++...
T Consensus 11 ~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~---~~~~~~~DivI~aT~~~~ 87 (135)
T PF01488_consen 11 KGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDL---EEALQEADIVINATPSGM 87 (135)
T ss_dssp TTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGH---CHHHHTESEEEE-SSTTS
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHH---HHHHhhCCeEEEecCCCC
Confidence 689999999999999999999999995 999999999988888877432 23444333 223457999999998653
Q ss_pred c--HHHHHHHhcc-CCEEEEeCCC
Q 018158 261 S--LGPILELLKV-NGTLSVVGAP 281 (360)
Q Consensus 261 ~--~~~~~~~l~~-~G~~v~~g~~ 281 (360)
. ....+..... -+.+++++.+
T Consensus 88 ~~i~~~~~~~~~~~~~~v~Dla~P 111 (135)
T PF01488_consen 88 PIITEEMLKKASKKLRLVIDLAVP 111 (135)
T ss_dssp TSSTHHHHTTTCHHCSEEEES-SS
T ss_pred cccCHHHHHHHHhhhhceeccccC
Confidence 2 1222222222 1577888754
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00023 Score=57.30 Aligned_cols=95 Identities=21% Similarity=0.361 Sum_probs=68.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL- 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~- 262 (360)
.|++++|+|-|-+|.-.++.++.+|++|++++.++-+.-++.. -|.. +. ...+.-...|++|.++|....+
T Consensus 22 ~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~-dGf~-v~------~~~~a~~~adi~vtaTG~~~vi~ 93 (162)
T PF00670_consen 22 AGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQAAM-DGFE-VM------TLEEALRDADIFVTATGNKDVIT 93 (162)
T ss_dssp TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHH-TT-E-EE-------HHHHTTT-SEEEE-SSSSSSB-
T ss_pred CCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHhhh-cCcE-ec------CHHHHHhhCCEEEECCCCccccC
Confidence 8999999999999999999999999999999999977666655 4542 22 1233456789999999987643
Q ss_pred HHHHHHhccCCEEEEeCCCCCCcc
Q 018158 263 GPILELLKVNGTLSVVGAPEAPFE 286 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~~~~~~~ 286 (360)
.+-++.|+++..+..+|.....+.
T Consensus 94 ~e~~~~mkdgail~n~Gh~d~Eid 117 (162)
T PF00670_consen 94 GEHFRQMKDGAILANAGHFDVEID 117 (162)
T ss_dssp HHHHHHS-TTEEEEESSSSTTSBT
T ss_pred HHHHHHhcCCeEEeccCcCceeEe
Confidence 588899999988888887654443
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00018 Score=63.01 Aligned_cols=75 Identities=13% Similarity=0.135 Sum_probs=58.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe-----E--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE-----F--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-----~--v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|| +++|...+..+-..|++|+.++|+.+++..+++++.-.+ + +|..+.+..... +..
T Consensus 5 ~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~ 84 (265)
T COG0300 5 KGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGP 84 (265)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCc
Confidence 6889999999 999999999999999999999999999988877665222 2 244444333221 357
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|+.+|++|.
T Consensus 85 IdvLVNNAG~ 94 (265)
T COG0300 85 IDVLVNNAGF 94 (265)
T ss_pred ccEEEECCCc
Confidence 9999999984
|
|
| >COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00046 Score=57.87 Aligned_cols=94 Identities=20% Similarity=0.243 Sum_probs=69.7
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHH----HHHHHHcCCCeEe-eCccHHHHHhcCCCcCEEEEcC
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKE----KEAKELLGADEFI-LSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~----~~~~~~~g~~~~v-~~~~~~~~~~~~~~~d~vid~~ 256 (360)
++++++||=+|+| .|..++-+++..| +|+.+++.++=. ++++. +|...+. ...+...--.....||.|+-+.
T Consensus 70 ~~~g~~VLEIGtG-sGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~-lg~~nV~v~~gDG~~G~~~~aPyD~I~Vta 146 (209)
T COG2518 70 LKPGDRVLEIGTG-SGYQAAVLARLVG-RVVSIERIEELAEQARRNLET-LGYENVTVRHGDGSKGWPEEAPYDRIIVTA 146 (209)
T ss_pred CCCCCeEEEECCC-chHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHH-cCCCceEEEECCcccCCCCCCCcCEEEEee
Confidence 5699999999986 4999999999988 999999988733 34444 7864443 2222211111246799999888
Q ss_pred CCcccHHHHHHHhccCCEEEEe
Q 018158 257 SAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 257 g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
+....-...++.|++||+++..
T Consensus 147 aa~~vP~~Ll~QL~~gGrlv~P 168 (209)
T COG2518 147 AAPEVPEALLDQLKPGGRLVIP 168 (209)
T ss_pred ccCCCCHHHHHhcccCCEEEEE
Confidence 8877778999999999999765
|
|
| >COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00029 Score=61.97 Aligned_cols=96 Identities=18% Similarity=0.328 Sum_probs=79.4
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcC---CCc---
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTV---SAK--- 259 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~---g~~--- 259 (360)
.+|.|+|+|.+|.-++.+|..+|++|++.+.+.+|++.+...|+..-...++....+.+.-.+.|++|.++ |..
T Consensus 169 ~kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgakaPk 248 (371)
T COG0686 169 AKVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAKAPK 248 (371)
T ss_pred ccEEEECCccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCCCce
Confidence 45778899999999999999999999999999999999988777664555667777777788999999866 221
Q ss_pred ccHHHHHHHhccCCEEEEeCCC
Q 018158 260 HSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 260 ~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
...++.++.|++|+.++++..-
T Consensus 249 Lvt~e~vk~MkpGsVivDVAiD 270 (371)
T COG0686 249 LVTREMVKQMKPGSVIVDVAID 270 (371)
T ss_pred ehhHHHHHhcCCCcEEEEEEEc
Confidence 2357889999999999998643
|
|
| >PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00057 Score=51.93 Aligned_cols=94 Identities=22% Similarity=0.281 Sum_probs=66.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHH-HcCCeEEEEeCChhHHHHHHHHc---CC-CeE-eeCccHHHHHhcCCCcCEEEEcC-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGK-AFGHHVTVISTSPSKEKEAKELL---GA-DEF-ILSTNAMQMQAGKRTLDFILDTV- 256 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~-~~G~~V~~~~~~~~~~~~~~~~~---g~-~~~-v~~~~~~~~~~~~~~~d~vid~~- 256 (360)
|+.+||-+|+|. |..++.+++ ..+++|++++.+++..+.+++++ +. +.+ +...+.........++|+|+...
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~ 79 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDAEFDPDFLEPFDLVICSGF 79 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCCHGGTTTSSCEEEEEECSG
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECccccCcccCCCCCEEEECCC
Confidence 678999999965 778888888 57889999999999998888876 22 222 11222212233356799999876
Q ss_pred CCc---------ccHHHHHHHhccCCEEEEe
Q 018158 257 SAK---------HSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 257 g~~---------~~~~~~~~~l~~~G~~v~~ 278 (360)
... ..++.+.+.|+++|+++..
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 80 TLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp SGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 221 1267899999999998753
|
... |
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0011 Score=59.22 Aligned_cols=74 Identities=18% Similarity=0.224 Sum_probs=55.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHh--------cCCCcCEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQA--------GKRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~--------~~~~~d~vi 253 (360)
.+++++|+|+ |++|..+++.+...|++|++++++.++++.+.. .+.+.+ .|..+.+.... .+.++|+++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~-~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA-EGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 5688999999 999999999988899999999999988877766 554332 34444432211 135799999
Q ss_pred EcCCC
Q 018158 254 DTVSA 258 (360)
Q Consensus 254 d~~g~ 258 (360)
++.|.
T Consensus 82 ~~Ag~ 86 (277)
T PRK05993 82 NNGAY 86 (277)
T ss_pred ECCCc
Confidence 98863
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00055 Score=63.28 Aligned_cols=97 Identities=20% Similarity=0.220 Sum_probs=75.8
Q ss_pred cEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcC--C-CeEeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLG--A-DEFILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g--~-~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
.++||+|+|.+|..+++.+-+.| .+|++.+|+.++.+++....+ . ...+|..+.+...+.-+++|+||++.+....
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~~ 81 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFVD 81 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchhh
Confidence 46899999999999999988888 699999999999999877322 1 3446666666666666778999999998766
Q ss_pred HHHHHHHhccCCEEEEeCCCC
Q 018158 262 LGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 262 ~~~~~~~l~~~G~~v~~g~~~ 282 (360)
...+-.+++.+=.++++....
T Consensus 82 ~~i~ka~i~~gv~yvDts~~~ 102 (389)
T COG1748 82 LTILKACIKTGVDYVDTSYYE 102 (389)
T ss_pred HHHHHHHHHhCCCEEEcccCC
Confidence 666667777777777776554
|
|
| >PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0011 Score=56.12 Aligned_cols=95 Identities=17% Similarity=0.198 Sum_probs=67.0
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHH---cC-CCeE--eeCccHHHHHhcCCCcCEEE
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFG--HHVTVISTSPSKEKEAKEL---LG-ADEF--ILSTNAMQMQAGKRTLDFIL 253 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G--~~V~~~~~~~~~~~~~~~~---~g-~~~~--v~~~~~~~~~~~~~~~d~vi 253 (360)
+.++++++.+|+|. |.+++++++..+ .+|++++.+++..+.++++ +| .+.+ +..+..+........+|.||
T Consensus 38 ~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~~~D~V~ 116 (198)
T PRK00377 38 LRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINEKFDRIF 116 (198)
T ss_pred CCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCCCCCEEE
Confidence 45999999999987 999999988764 5899999999888766543 55 3322 22222222233346799999
Q ss_pred EcCCC---cccHHHHHHHhccCCEEEE
Q 018158 254 DTVSA---KHSLGPILELLKVNGTLSV 277 (360)
Q Consensus 254 d~~g~---~~~~~~~~~~l~~~G~~v~ 277 (360)
...+. ...+..+.+.|+++|+++.
T Consensus 117 ~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (198)
T PRK00377 117 IGGGSEKLKEIISASWEIIKKGGRIVI 143 (198)
T ss_pred ECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence 85543 2346788889999999975
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00038 Score=57.62 Aligned_cols=74 Identities=18% Similarity=0.149 Sum_probs=57.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC--CCeEeeCccHHHHHhc-------CCCcCEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG--ADEFILSTNAMQMQAG-------KRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g--~~~~v~~~~~~~~~~~-------~~~~d~vi 253 (360)
.|.+|||.|+ +++|+..++-...+|-+|++..|++++++.++.... ...+.|-.+.+..++. -...++++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 5889999988 999999999999999999999999999999988443 2344444444332222 34579999
Q ss_pred EcCC
Q 018158 254 DTVS 257 (360)
Q Consensus 254 d~~g 257 (360)
+++|
T Consensus 84 NNAG 87 (245)
T COG3967 84 NNAG 87 (245)
T ss_pred eccc
Confidence 9988
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00071 Score=60.05 Aligned_cols=97 Identities=14% Similarity=0.193 Sum_probs=74.5
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcCCh-HHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGG-LGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~-vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+..+.+..+++..--- .|++++|+|.|. +|.-++.++...|++|+++.+....+
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~l--~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l------------------ 195 (286)
T PRK14175 136 TFVPCTPLGIMEILKHADIDL--EGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDM------------------ 195 (286)
T ss_pred CCCCCcHHHHHHHHHHcCCCC--CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhH------------------
Confidence 457888777777787765333 799999999954 99999999999999999998653221
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
...-+.+|++|.++|....+.. ++++++..++++|...
T Consensus 196 ---~~~~~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 196 ---ASYLKDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP 233 (286)
T ss_pred ---HHHHhhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence 1123578999999998765544 5789998999999764
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.002 Score=57.47 Aligned_cols=72 Identities=15% Similarity=0.170 Sum_probs=53.8
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhc-------CCCcCEEEEcC
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAG-------KRTLDFILDTV 256 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~-------~~~~d~vid~~ 256 (360)
+++||+|+ |++|..+++.+...|++|++++++.++.+.+.. .+...+ .|..+.+..... ..++|++|++.
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA-AGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 47899999 999999999999999999999999887776665 554333 355444333221 35799999999
Q ss_pred CC
Q 018158 257 SA 258 (360)
Q Consensus 257 g~ 258 (360)
|.
T Consensus 81 g~ 82 (274)
T PRK05693 81 GY 82 (274)
T ss_pred CC
Confidence 83
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0015 Score=56.73 Aligned_cols=99 Identities=15% Similarity=0.165 Sum_probs=65.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHcCCCeE-eeCccHHHHHhc---CCCcCEEEEcCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIST-SPSKEKEAKELLGADEF-ILSTNAMQMQAG---KRTLDFILDTVS 257 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~-~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~---~~~~d~vid~~g 257 (360)
.++++||+|+ |++|..+++.+...|++|+++.+ +.++.+.+.+.++...+ .|..+.+..... ..++|++|++.|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag 84 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAG 84 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence 5789999999 99999999999999999888765 45555555444664433 344333322221 346999999987
Q ss_pred Ccc---c----------------------HHHHHHHhccCCEEEEeCCCC
Q 018158 258 AKH---S----------------------LGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 258 ~~~---~----------------------~~~~~~~l~~~G~~v~~g~~~ 282 (360)
... . ...+...++..|+++.++...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~ 134 (237)
T PRK12742 85 IAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN 134 (237)
T ss_pred CCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence 421 0 123344566678999887654
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00035 Score=58.11 Aligned_cols=120 Identities=22% Similarity=0.319 Sum_probs=80.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCc----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAK---- 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~---- 259 (360)
.|++|.|+|.|.+|...+++++.+|++|++.+++......... .+.. ..+. .+.-...|+|+.+....
T Consensus 35 ~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~-~~~~----~~~l---~ell~~aDiv~~~~plt~~T~ 106 (178)
T PF02826_consen 35 RGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADE-FGVE----YVSL---DELLAQADIVSLHLPLTPETR 106 (178)
T ss_dssp TTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH-TTEE----ESSH---HHHHHH-SEEEE-SSSSTTTT
T ss_pred CCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhhccc-ccce----eeeh---hhhcchhhhhhhhhccccccc
Confidence 6899999999999999999999999999999999876654444 4431 1122 22334689999888732
Q ss_pred -ccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccce-EEECCccHH
Q 018158 260 -HSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNI-EVIKPDQIN 335 (360)
Q Consensus 260 -~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~ 335 (360)
..-.+.+..|+++..+++++.-. .=+-+.+++.+.+|++.-.. .+|.-|.++
T Consensus 107 ~li~~~~l~~mk~ga~lvN~aRG~------------------------~vde~aL~~aL~~g~i~ga~lDV~~~EP~~ 160 (178)
T PF02826_consen 107 GLINAEFLAKMKPGAVLVNVARGE------------------------LVDEDALLDALESGKIAGAALDVFEPEPLP 160 (178)
T ss_dssp TSBSHHHHHTSTTTEEEEESSSGG------------------------GB-HHHHHHHHHTTSEEEEEESS-SSSSSS
T ss_pred eeeeeeeeeccccceEEEeccchh------------------------hhhhhHHHHHHhhccCceEEEECCCCCCCC
Confidence 12368889999999999886432 11456677778888876432 555544333
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0014 Score=63.69 Aligned_cols=101 Identities=12% Similarity=0.114 Sum_probs=68.8
Q ss_pred CCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc--------CC------C-eEeeCccHHHHHhc
Q 018158 182 SPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL--------GA------D-EFILSTNAMQMQAG 245 (360)
Q Consensus 182 ~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~--------g~------~-~~v~~~~~~~~~~~ 245 (360)
.+.|+++||+|+ |.+|..+++.+...|++|++++|+.++.+.+.+.+ |. . ...|..+.+.+...
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a 156 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA 156 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence 448999999999 99999999999889999999999988776543321 21 1 11244444455445
Q ss_pred CCCcCEEEEcCCCcc---------------cHHHHHHHhcc--CCEEEEeCCCC
Q 018158 246 KRTLDFILDTVSAKH---------------SLGPILELLKV--NGTLSVVGAPE 282 (360)
Q Consensus 246 ~~~~d~vid~~g~~~---------------~~~~~~~~l~~--~G~~v~~g~~~ 282 (360)
-+++|+||+++|... ....+++.+.. .++||.++...
T Consensus 157 LggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 157 LGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred hcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 568999999987531 11233444433 36899887653
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0011 Score=58.60 Aligned_cols=106 Identities=16% Similarity=0.233 Sum_probs=72.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cC-CCeEe----eCccHHHHH-------hcCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LG-ADEFI----LSTNAMQMQ-------AGKR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g-~~~~v----~~~~~~~~~-------~~~~ 247 (360)
.|+.|+|+|| +++|.+.+.-.-..|++++.+.+..++++.+.+. .+ .+.++ |-.+.++.. ..-+
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 6899999999 9999987777777899999999888887777222 33 33121 222222222 2267
Q ss_pred CcCEEEEcCCCc-------------------------ccHHHHHHHhccC--CEEEEeCCCCCCcccCh
Q 018158 248 TLDFILDTVSAK-------------------------HSLGPILELLKVN--GTLSVVGAPEAPFELPS 289 (360)
Q Consensus 248 ~~d~vid~~g~~-------------------------~~~~~~~~~l~~~--G~~v~~g~~~~~~~~~~ 289 (360)
++|+.+|..|-. ...+.++..|++. |+|+.+++..+...++.
T Consensus 91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~ 159 (282)
T KOG1205|consen 91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPF 159 (282)
T ss_pred CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCc
Confidence 899999998832 1235666677643 99999988776555444
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0016 Score=56.57 Aligned_cols=99 Identities=21% Similarity=0.294 Sum_probs=68.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC---CCeEe--eCccHHHHHh-------cCCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG---ADEFI--LSTNAMQMQA-------GKRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g---~~~~v--~~~~~~~~~~-------~~~~~d 250 (360)
.+++++|+|+ |.+|..+++.+...|++|+++++++++.+.+.+.+. ..+.+ |-.+.+.... ...++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 5789999999 999999999999999999999999988776643232 11222 2233222211 134689
Q ss_pred EEEEcCCCcc-----------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 251 FILDTVSAKH-----------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 251 ~vid~~g~~~-----------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.++.+.|... .++.....++++|+++.++...
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 9999887421 1345556667788999887654
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0015 Score=54.44 Aligned_cols=105 Identities=18% Similarity=0.194 Sum_probs=72.3
Q ss_pred CCcEEEEEcC--ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-eEeeCccHHHHHhc--------CCCcCEE
Q 018158 184 AKKRIGIVGL--GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-EFILSTNAMQMQAG--------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga--g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~--------~~~~d~v 252 (360)
..+.|||+|+ |++|.+.+.-...-|+.|+++.|.-++-..+..++|.. .-+|-.+++...+. .++.|+.
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 5678999877 99999998888889999999999999888887558842 22344444333221 4678999
Q ss_pred EEcCCCc----------c------------c--HHH--HHHHhccCCEEEEeCCCCCCcccC
Q 018158 253 LDTVSAK----------H------------S--LGP--ILELLKVNGTLSVVGAPEAPFELP 288 (360)
Q Consensus 253 id~~g~~----------~------------~--~~~--~~~~l~~~G~~v~~g~~~~~~~~~ 288 (360)
+|..|.. . . +.+ .--+.+..|+||.+|...+-.+++
T Consensus 86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfp 147 (289)
T KOG1209|consen 86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFP 147 (289)
T ss_pred EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccc
Confidence 9988732 0 0 111 122456789999999876544444
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0021 Score=57.36 Aligned_cols=74 Identities=19% Similarity=0.268 Sum_probs=55.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhc-------CCCcCEEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAG-------KRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~-------~~~~d~vid 254 (360)
.+++++|+|+ |++|..+++.+...|++|++++++.++++.+.. .+...+ .|-.+.+..... ..++|++|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS-LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 4678999999 999999999988899999999999888776655 454322 344444333222 357999999
Q ss_pred cCCC
Q 018158 255 TVSA 258 (360)
Q Consensus 255 ~~g~ 258 (360)
+.|.
T Consensus 81 ~ag~ 84 (273)
T PRK06182 81 NAGY 84 (273)
T ss_pred CCCc
Confidence 9984
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0014 Score=53.66 Aligned_cols=98 Identities=17% Similarity=0.203 Sum_probs=69.7
Q ss_pred cccccchhhhhhchhhccCCCCCCCCcEEEEEcCCh-HHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCcc
Q 018158 160 AAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGG-LGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN 238 (360)
Q Consensus 160 aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~-vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~ 238 (360)
....||...++...++....-- .+++++|+|+|. +|..++..++..|++|+++.++.+++..
T Consensus 21 ~~~~p~~~~a~v~l~~~~~~~l--~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~--------------- 83 (168)
T cd01080 21 PGFIPCTPAGILELLKRYGIDL--AGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKE--------------- 83 (168)
T ss_pred CCccCChHHHHHHHHHHcCCCC--CCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHH---------------
Confidence 3456666666666666554323 799999999986 5999999999999999999977432221
Q ss_pred HHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 239 AMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 239 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.-..+|+||.+++....+.. +.++++-.+++++.+.
T Consensus 84 ------~l~~aDiVIsat~~~~ii~~--~~~~~~~viIDla~pr 119 (168)
T cd01080 84 ------HTKQADIVIVAVGKPGLVKG--DMVKPGAVVIDVGINR 119 (168)
T ss_pred ------HHhhCCEEEEcCCCCceecH--HHccCCeEEEEccCCC
Confidence 22468999999998654333 3567777778888765
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0031 Score=51.84 Aligned_cols=98 Identities=18% Similarity=0.193 Sum_probs=67.2
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHH---HcCCC--eEeeCccHHHHHhcCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKE---LLGAD--EFILSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~---~~g~~--~~v~~~~~~~~~~~~~~~d~vid~ 255 (360)
+++|+.++=+|+|. |-.++++++.. ..+||++++++++.+..+. +||.+ .++....++...... .+|.+|--
T Consensus 32 ~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~-~~daiFIG 109 (187)
T COG2242 32 PRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLP-SPDAIFIG 109 (187)
T ss_pred CCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCC-CCCEEEEC
Confidence 56999888889953 66777888433 3489999999987655433 38865 334444443333323 79999965
Q ss_pred CCC--cccHHHHHHHhccCCEEEEeCCC
Q 018158 256 VSA--KHSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 256 ~g~--~~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
-|. ...++.++..|+++|++|.-...
T Consensus 110 Gg~~i~~ile~~~~~l~~ggrlV~nait 137 (187)
T COG2242 110 GGGNIEEILEAAWERLKPGGRLVANAIT 137 (187)
T ss_pred CCCCHHHHHHHHHHHcCcCCeEEEEeec
Confidence 543 23578999999999999876543
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.001 Score=55.44 Aligned_cols=91 Identities=22% Similarity=0.258 Sum_probs=67.2
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhcCCCcCEEEEcCCC----ccc
Q 018158 188 IGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAGKRTLDFILDTVSA----KHS 261 (360)
Q Consensus 188 vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g~----~~~ 261 (360)
|+|+|+ |.+|..+++.+...|.+|+++.|++++.+. . .+.+.+ .|..+.+.+...-.++|+||.+.|. ...
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~-~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~ 77 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--S-PGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDA 77 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--C-TTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--c-cccccceeeehhhhhhhhhhhhcchhhhhhhhhcccccc
Confidence 689999 999999999999999999999999997776 2 343322 3455555566666799999999984 223
Q ss_pred HHHHHHHhccCC--EEEEeCCC
Q 018158 262 LGPILELLKVNG--TLSVVGAP 281 (360)
Q Consensus 262 ~~~~~~~l~~~G--~~v~~g~~ 281 (360)
...+++.++..| +++.++..
T Consensus 78 ~~~~~~a~~~~~~~~~v~~s~~ 99 (183)
T PF13460_consen 78 AKNIIEAAKKAGVKRVVYLSSA 99 (183)
T ss_dssp HHHHHHHHHHTTSSEEEEEEET
T ss_pred cccccccccccccccceeeecc
Confidence 566667776554 77766543
|
... |
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0032 Score=55.77 Aligned_cols=99 Identities=14% Similarity=0.131 Sum_probs=67.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe-E--eeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE-F--ILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-~--v~~~~~~~~~~~-------~~~~d~v 252 (360)
.+++++|+|+ |++|..+++.+...|++|++++++.++.+.+.+.++... . .|..+.+..... ...+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5789999999 999999999998999999999999887776666455321 1 244443322221 3568999
Q ss_pred EEcCCCcc------------------------cHHHHHHHh-ccCCEEEEeCCCC
Q 018158 253 LDTVSAKH------------------------SLGPILELL-KVNGTLSVVGAPE 282 (360)
Q Consensus 253 id~~g~~~------------------------~~~~~~~~l-~~~G~~v~~g~~~ 282 (360)
+++.|... ..+.+...| +.+|+++.++...
T Consensus 85 v~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~ 139 (261)
T PRK08265 85 VNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSIS 139 (261)
T ss_pred EECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchh
Confidence 99987420 122334444 5678999887643
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0056 Score=54.32 Aligned_cols=99 Identities=13% Similarity=0.103 Sum_probs=66.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc----CCC---eEeeCccHHHHHhc------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL----GAD---EFILSTNAMQMQAG------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g~~---~~v~~~~~~~~~~~------~~~~ 249 (360)
.++++||+|+ +++|.++++.+...|++|++++++.++.+.+.+.+ +.+ ...|-.+.+..... -.++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 5789999999 99999999999999999999999988776655433 322 11233333222221 2469
Q ss_pred CEEEEcCCCcc-------------------------cHHHHHHHhcc--CCEEEEeCCCC
Q 018158 250 DFILDTVSAKH-------------------------SLGPILELLKV--NGTLSVVGAPE 282 (360)
Q Consensus 250 d~vid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~ 282 (360)
|+++++.|... ..+.++..|+. .|+++.++...
T Consensus 87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~ 146 (263)
T PRK08339 87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVA 146 (263)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCcc
Confidence 99999987421 12445556643 48999887654
|
|
| >PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0066 Score=54.47 Aligned_cols=113 Identities=17% Similarity=0.019 Sum_probs=74.5
Q ss_pred hhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHH-Hc-CCeEEEEeCChhHHHHHHHHcC-CCeEeeCccHHH
Q 018158 166 AGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGK-AF-GHHVTVISTSPSKEKEAKELLG-ADEFILSTNAMQ 241 (360)
Q Consensus 166 ~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~-~~-G~~V~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~ 241 (360)
-+.|.|..-+.+..-.....+.|||..| +-.++.++..++ .. +.+++.+.+. ......++ +| .+.++.|++.+.
T Consensus 117 Lf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~-~N~~Fve~-lg~Yd~V~~Yd~i~~ 194 (314)
T PF11017_consen 117 LFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSA-RNVAFVES-LGCYDEVLTYDDIDS 194 (314)
T ss_pred HHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEecC-cchhhhhc-cCCceEEeehhhhhh
Confidence 3455554433332221335577888888 888888888888 33 4578888844 44567777 99 588888877644
Q ss_pred HHhcCCCcCEEEEcCCCcccHHHHHHHhccC-CEEEEeCCCC
Q 018158 242 MQAGKRTLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPE 282 (360)
Q Consensus 242 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~ 282 (360)
+. ...--+++|..|+......+...+.+. -..+.+|...
T Consensus 195 l~--~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th 234 (314)
T PF11017_consen 195 LD--APQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH 234 (314)
T ss_pred cc--CCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence 32 245677889999988777777777764 3456677644
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.004 Score=55.24 Aligned_cols=74 Identities=22% Similarity=0.204 Sum_probs=51.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe---EeeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE---FILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~ 249 (360)
++++++|+|+ |++|..+++.+...|++|++++++.++.+...+.+ +... ..|..+.+..... ..++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i 87 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI 87 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 6789999999 99999999998899999999999887665443322 2221 1244443322221 3468
Q ss_pred CEEEEcCC
Q 018158 250 DFILDTVS 257 (360)
Q Consensus 250 d~vid~~g 257 (360)
|++|.+.|
T Consensus 88 D~vi~~ag 95 (264)
T PRK07576 88 DVLVSGAA 95 (264)
T ss_pred CEEEECCC
Confidence 99998876
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0038 Score=54.61 Aligned_cols=75 Identities=19% Similarity=0.204 Sum_probs=54.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHH-------hcCCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQ-------AGKRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~-------~~~~~~d~v 252 (360)
++++++|+|+ |.+|..+++.+...|++|++++++.++.+.+.+.++.... .|..+.+... ....++|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5789999999 9999999999999999999999988777666655664322 2333332221 113579999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|++.|.
T Consensus 85 i~~ag~ 90 (249)
T PRK06500 85 FINAGV 90 (249)
T ss_pred EECCCC
Confidence 999874
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0065 Score=56.01 Aligned_cols=99 Identities=15% Similarity=0.207 Sum_probs=67.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.+++++|+|+ |++|..+++.+...|++|+++++++++++.+.+. .|.+.. .|..+.+..... -.++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 5688999999 9999999999988999999999998876655432 343322 244444333222 3479
Q ss_pred CEEEEcCCCcc-------------------------cHHHHHHHhcc--CCEEEEeCCCC
Q 018158 250 DFILDTVSAKH-------------------------SLGPILELLKV--NGTLSVVGAPE 282 (360)
Q Consensus 250 d~vid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~ 282 (360)
|++|++.|... ....++..+++ .|+++.++...
T Consensus 87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~ 146 (334)
T PRK07109 87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSAL 146 (334)
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChh
Confidence 99999998421 11234555554 58999987654
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0037 Score=57.52 Aligned_cols=75 Identities=20% Similarity=0.232 Sum_probs=55.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|.++++.+...|++|+++++++++++.+.+. .|.+.. .|-.+.+..... ..++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999999 9999999999999999999999999887655442 454322 244444333222 3579
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|++.|.
T Consensus 86 D~lVnnAG~ 94 (330)
T PRK06139 86 DVWVNNVGV 94 (330)
T ss_pred CEEEECCCc
Confidence 999999983
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0025 Score=51.57 Aligned_cols=96 Identities=21% Similarity=0.209 Sum_probs=65.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcCCCe-EeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADE-FILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
.+++++|+|+|.+|...++.+...| .+|++++++.++.+.+.+.++... .....+. .+...++|+|+.|++....
T Consensus 18 ~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dvvi~~~~~~~~ 94 (155)
T cd01065 18 KGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDL---EELLAEADLIINTTPVGMK 94 (155)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecch---hhccccCCEEEeCcCCCCC
Confidence 5788999999999999999888886 689999999888777666466421 0111121 2225789999999986532
Q ss_pred ----HHHHHHHhccCCEEEEeCCCC
Q 018158 262 ----LGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 262 ----~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.......++++..+++++...
T Consensus 95 ~~~~~~~~~~~~~~~~~v~D~~~~~ 119 (155)
T cd01065 95 PGDELPLPPSLLKPGGVVYDVVYNP 119 (155)
T ss_pred CCCCCCCCHHHcCCCCEEEEcCcCC
Confidence 111224467777777776543
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0017 Score=58.29 Aligned_cols=76 Identities=24% Similarity=0.203 Sum_probs=54.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCe-EeeCccHHHHHhcCCCcCEEEEcCCCc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADE-FILSTNAMQMQAGKRTLDFILDTVSAK 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~d~vid~~g~~ 259 (360)
.+++++|+|+|+.+.+++..+..+|+ +|+++.|+.++.+.+.+.++... +......+.....-..+|+||+|++..
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g 201 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPAD 201 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCC
Confidence 57899999999999999999999998 69999999998888777565321 111111111122235799999999765
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0062 Score=59.75 Aligned_cols=99 Identities=17% Similarity=0.282 Sum_probs=71.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~d~v 252 (360)
.++++||+|+ +++|..+++.+...|++|++++++.++.+.+.+.++.... .|-.+.+..... ...+|++
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 347 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL 347 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6789999999 9999999999989999999999999888877765664322 344443332221 3569999
Q ss_pred EEcCCCcc--------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 253 LDTVSAKH--------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 253 id~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
|+++|... ..+.++..|+.+|+++.++...
T Consensus 348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~ 403 (520)
T PRK06484 348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIA 403 (520)
T ss_pred EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchh
Confidence 99887420 1244455666679999987654
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0031 Score=53.23 Aligned_cols=77 Identities=17% Similarity=0.215 Sum_probs=55.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc----CCCe-EeeCccHHHHHhcCCCcCEEEEcCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL----GADE-FILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g~~~-~v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
.+++++|+|+ |.+|..++..+...|++|+++.|+.++.+.+.+.+ +... ..+..+.+.....-.++|+||.+++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at~ 106 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAGA 106 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECCC
Confidence 5789999998 99999888888888999999999988877665533 2221 1233333333344568999999987
Q ss_pred Ccc
Q 018158 258 AKH 260 (360)
Q Consensus 258 ~~~ 260 (360)
...
T Consensus 107 ~g~ 109 (194)
T cd01078 107 AGV 109 (194)
T ss_pred CCc
Confidence 654
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.00084 Score=64.78 Aligned_cols=75 Identities=16% Similarity=0.233 Sum_probs=54.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh---------------------hHHHHHHHHcCCCeEeeCccHH--
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP---------------------SKEKEAKELLGADEFILSTNAM-- 240 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~---------------------~~~~~~~~~~g~~~~v~~~~~~-- 240 (360)
.+++|+|+|+|+.|+.++..++..|.+|++++..+ ...+.+++ +|.+..++..-..
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~-~Gv~~~~~~~v~~~~ 218 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTA-MGIEFHLNCEVGRDI 218 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHH-CCCEEECCCEeCCcc
Confidence 68899999999999999999999999999998654 23455666 8876554432111
Q ss_pred HHHhcCCCcCEEEEcCCCc
Q 018158 241 QMQAGKRTLDFILDTVSAK 259 (360)
Q Consensus 241 ~~~~~~~~~d~vid~~g~~ 259 (360)
.......++|.||.++|..
T Consensus 219 ~~~~~~~~~D~vilAtGa~ 237 (467)
T TIGR01318 219 SLDDLLEDYDAVFLGVGTY 237 (467)
T ss_pred CHHHHHhcCCEEEEEeCCC
Confidence 1112224799999999965
|
This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli. |
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0017 Score=57.71 Aligned_cols=71 Identities=18% Similarity=0.287 Sum_probs=54.1
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCe----EeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADE----FILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~----~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
++++++|+|+|+.+.+++..++..|+ +|+++.|+.+|.+.+.+.++... .....+.+ . ...+|++|||++.
T Consensus 125 ~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~---~-~~~~dliINaTp~ 200 (283)
T COG0169 125 TGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLE---G-LEEADLLINATPV 200 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccccccc---c-ccccCEEEECCCC
Confidence 58999999999999999999999997 79999999999888887666322 11111111 0 1169999999974
|
|
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0013 Score=54.11 Aligned_cols=96 Identities=15% Similarity=0.255 Sum_probs=66.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeC-------------------cc-HHHHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILS-------------------TN-AMQMQ 243 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~-------------------~~-~~~~~ 243 (360)
+..+++|+|+|.+|+-|+.+++.+|++|++.+...++.+.... .+...+... .. ...+.
T Consensus 19 ~p~~vvv~G~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGAGRVGQGAAEIAKGLGAEVVVPDERPERLRQLES-LGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHH-TTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhc-ccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 4478999999999999999999999999999999998888877 665433321 11 11222
Q ss_pred hcCCCcCEEEEcC---CCc---ccHHHHHHHhccCCEEEEeCC
Q 018158 244 AGKRTLDFILDTV---SAK---HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 244 ~~~~~~d~vid~~---g~~---~~~~~~~~~l~~~G~~v~~g~ 280 (360)
+.-..+|++|.+. +.. ..-.+.++.|+++..++++..
T Consensus 98 ~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~ 140 (168)
T PF01262_consen 98 EFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISC 140 (168)
T ss_dssp HHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTG
T ss_pred HHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEe
Confidence 2345689998643 211 123678899999988988854
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0026 Score=57.01 Aligned_cols=95 Identities=23% Similarity=0.255 Sum_probs=64.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS- 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~- 261 (360)
.+++++|+|+|++|.+++..+...| .+|+++.|+.++.+.+.+.++....+.. +. .....-.++|+||+|++....
T Consensus 122 ~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~-~~~~~~~~~DivInaTp~g~~~ 199 (278)
T PRK00258 122 KGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DL-ELQEELADFDLIINATSAGMSG 199 (278)
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cc-cchhccccCCEEEECCcCCCCC
Confidence 5788999999999999999999999 5899999999988777765552210111 10 111223679999999975421
Q ss_pred ----HHHHHHHhccCCEEEEeCC
Q 018158 262 ----LGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 262 ----~~~~~~~l~~~G~~v~~g~ 280 (360)
.......++++..++++-.
T Consensus 200 ~~~~~~~~~~~l~~~~~v~DivY 222 (278)
T PRK00258 200 ELPLPPLPLSLLRPGTIVYDMIY 222 (278)
T ss_pred CCCCCCCCHHHcCCCCEEEEeec
Confidence 0112356666666666643
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0032 Score=56.94 Aligned_cols=75 Identities=19% Similarity=0.219 Sum_probs=56.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC--CeE---eeCccHHHHHhc-------CCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA--DEF---ILSTNAMQMQAG-------KRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~--~~~---v~~~~~~~~~~~-------~~~~d 250 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++++.+.+.++. ... .|-.+.+..... ..++|
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 87 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID 87 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999999 9999999999999999999999999888776665652 111 344444332221 35799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|++.|.
T Consensus 88 ~vI~nAG~ 95 (296)
T PRK05872 88 VVVANAGI 95 (296)
T ss_pred EEEECCCc
Confidence 99999984
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0069 Score=58.29 Aligned_cols=75 Identities=16% Similarity=0.144 Sum_probs=52.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC--hhHHHHHHHHcCCCe-EeeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTS--PSKEKEAKELLGADE-FILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~--~~~~~~~~~~~g~~~-~v~~~~~~~~~~~-------~~~~d~v 252 (360)
+++++||+|+ |++|..+++.+...|++|++++++ .++...+.+.++... ..|..+.+..... ..++|++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v 288 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV 288 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 5789999999 999999999999999999999874 334444444356432 2354444332221 3479999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|++.|.
T Consensus 289 i~~AG~ 294 (450)
T PRK08261 289 VHNAGI 294 (450)
T ss_pred EECCCc
Confidence 999983
|
|
| >TIGR00406 prmA ribosomal protein L11 methyltransferase | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0065 Score=54.69 Aligned_cols=96 Identities=21% Similarity=0.196 Sum_probs=64.2
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHc---CCC-eEeeCccHHHHHhcCCCcCEEEEcCC
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELL---GAD-EFILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~---g~~-~~v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
.++++||-+|+|. |..++.+++ .|+ +|++++.++...+.+++.+ +.. .+...... .......++|+|+....
T Consensus 158 ~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~-~~~~~~~~fDlVvan~~ 234 (288)
T TIGR00406 158 LKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIY-LEQPIEGKADVIVANIL 234 (288)
T ss_pred CCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecc-cccccCCCceEEEEecC
Confidence 3789999999987 887777776 465 8999999998877776643 221 11111110 11112457999986543
Q ss_pred Cc---ccHHHHHHHhccCCEEEEeCCC
Q 018158 258 AK---HSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 258 ~~---~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
.. ..+..+.+.|+++|.++..|..
T Consensus 235 ~~~l~~ll~~~~~~LkpgG~li~sgi~ 261 (288)
T TIGR00406 235 AEVIKELYPQFSRLVKPGGWLILSGIL 261 (288)
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence 22 2456788999999999988754
|
Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis. |
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.01 Score=52.84 Aligned_cols=75 Identities=20% Similarity=0.253 Sum_probs=54.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC-CCe-EeeCccHHHHH-------hcCCCcCEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG-ADE-FILSTNAMQMQ-------AGKRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g-~~~-~v~~~~~~~~~-------~~~~~~d~vi 253 (360)
.++++||+|+ |++|..+++.+...|++|+++++++++.+.+.+.++ ... ..|..+.+... ..-.++|++|
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV 83 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4678999999 999999998888889999999999988776655455 221 12444443321 1135799999
Q ss_pred EcCCC
Q 018158 254 DTVSA 258 (360)
Q Consensus 254 d~~g~ 258 (360)
++.|.
T Consensus 84 ~~ag~ 88 (273)
T PRK07825 84 NNAGV 88 (273)
T ss_pred ECCCc
Confidence 99874
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0041 Score=54.27 Aligned_cols=75 Identities=12% Similarity=0.188 Sum_probs=56.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhc---CCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAG---KRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~---~~~~d~vid~~g~ 258 (360)
.+++++|+|+ |.+|..+++.+...|++|++++++.++.+.+.+..+...+ .|..+.+..... ..++|++|++.|.
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~ 87 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGI 87 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCC
Confidence 5789999999 9999999999999999999999998887776664554322 344444332222 3578999999974
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0093 Score=54.44 Aligned_cols=75 Identities=20% Similarity=0.260 Sum_probs=53.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC-CC-eEeeCccHHHHHhc-------CCCcCEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG-AD-EFILSTNAMQMQAG-------KRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g-~~-~~v~~~~~~~~~~~-------~~~~d~vi 253 (360)
.+++++|+|+ |++|..++..+...|++|++++|+.++.+.+.+.+. .. ...|-.+.+..... ..++|++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 5689999999 999999998888899999999999887665544332 11 11244444332221 35799999
Q ss_pred EcCCC
Q 018158 254 DTVSA 258 (360)
Q Consensus 254 d~~g~ 258 (360)
+++|.
T Consensus 105 ~nAg~ 109 (315)
T PRK06196 105 NNAGV 109 (315)
T ss_pred ECCCC
Confidence 99873
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.01 Score=51.94 Aligned_cols=75 Identities=13% Similarity=0.144 Sum_probs=53.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC--CC---eEeeCccHHHHHhc-------CCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG--AD---EFILSTNAMQMQAG-------KRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g--~~---~~v~~~~~~~~~~~-------~~~~d 250 (360)
.++++||+|+ |.+|..+++.+...|++|++++|++++.+.+...+. .. ...|..+.+..... ..++|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 5679999999 999999999888889999999999887766655343 11 11233333333221 34689
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|.+.|.
T Consensus 84 ~vi~~ag~ 91 (251)
T PRK07231 84 ILVNNAGT 91 (251)
T ss_pred EEEECCCC
Confidence 99999874
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0036 Score=55.85 Aligned_cols=95 Identities=17% Similarity=0.128 Sum_probs=66.7
Q ss_pred ccchhhhhhchhhccCCCCCCCCcEEEEEcCCh-HHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH
Q 018158 163 LLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGG-LGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ 241 (360)
Q Consensus 163 l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~-vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~ 241 (360)
.+|+.......++..+..- .|++++|+|.|. +|..++.++...|++|+++.+... .+.+
T Consensus 139 ~p~T~~gii~~L~~~~i~l--~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~---~L~~--------------- 198 (283)
T PRK14192 139 GSATPAGIMRLLKAYNIEL--AGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ---NLPE--------------- 198 (283)
T ss_pred cCCcHHHHHHHHHHcCCCC--CCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch---hHHH---------------
Confidence 3444444444455544323 799999999966 999999999999999998886322 2222
Q ss_pred HHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 242 MQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 242 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.-+++|++++++|.+..+. .++++++..++++|...
T Consensus 199 ---~~~~aDIvI~AtG~~~~v~--~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 199 ---LVKQADIIVGAVGKPELIK--KDWIKQGAVVVDAGFHP 234 (283)
T ss_pred ---HhccCCEEEEccCCCCcCC--HHHcCCCCEEEEEEEee
Confidence 1257999999998765433 36789998998998654
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0099 Score=58.29 Aligned_cols=75 Identities=20% Similarity=0.376 Sum_probs=56.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe---EeeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE---FILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~d~v 252 (360)
.++++||+|+ +++|.++++.+...|++|++++++.++++.+.+.++... ..|..+.+..... ..++|++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL 83 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 6789999999 999999999999999999999999988877766566432 2344444332221 3579999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|++.|.
T Consensus 84 i~nag~ 89 (520)
T PRK06484 84 VNNAGV 89 (520)
T ss_pred EECCCc
Confidence 999874
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.006 Score=51.90 Aligned_cols=95 Identities=11% Similarity=0.049 Sum_probs=65.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS-KEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~-~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
.|++|||+|+|.+|..-++.+...|++|++++.... .+..+.+ .|.-..+. .+.. ...-.++++||-+++.....
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~-~~~i~~~~-~~~~--~~dl~~~~lVi~at~d~~ln 83 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLLAE-QGGITWLA-RCFD--ADILEGAFLVIAATDDEELN 83 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHH-cCCEEEEe-CCCC--HHHhCCcEEEEECCCCHHHH
Confidence 578999999999999999999999999999987643 3344444 34212221 1111 11135799999999987655
Q ss_pred HHHHHHhccCCEEEEeCCCC
Q 018158 263 GPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~~~ 282 (360)
..+....+..|..+++....
T Consensus 84 ~~i~~~a~~~~ilvn~~d~~ 103 (205)
T TIGR01470 84 RRVAHAARARGVPVNVVDDP 103 (205)
T ss_pred HHHHHHHHHcCCEEEECCCc
Confidence 67777777788887665433
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0023 Score=47.97 Aligned_cols=89 Identities=20% Similarity=0.209 Sum_probs=62.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
.|++|||+|+|.+|..-++.+...|++|+++++.. ...+ +.-... ... +...-.++++||.+++....-.
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~---~~~~---~~i~~~-~~~---~~~~l~~~~lV~~at~d~~~n~ 75 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEI---EFSE---GLIQLI-RRE---FEEDLDGADLVFAATDDPELNE 75 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSE---HHHH---TSCEEE-ESS----GGGCTTESEEEE-SS-HHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCch---hhhh---hHHHHH-hhh---HHHHHhhheEEEecCCCHHHHH
Confidence 68999999999999999999999999999999885 1111 211111 111 1223567999999999887667
Q ss_pred HHHHHhccCCEEEEeCCCC
Q 018158 264 PILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 264 ~~~~~l~~~G~~v~~g~~~ 282 (360)
.+....+.-|.++.+...+
T Consensus 76 ~i~~~a~~~~i~vn~~D~p 94 (103)
T PF13241_consen 76 AIYADARARGILVNVVDDP 94 (103)
T ss_dssp HHHHHHHHTTSEEEETT-C
T ss_pred HHHHHHhhCCEEEEECCCc
Confidence 7777788888998886654
|
|
| >PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4) | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0045 Score=55.07 Aligned_cols=92 Identities=26% Similarity=0.330 Sum_probs=57.0
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCC-eE-eeCccHHHHHhcCCCcCEEEEc-
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGAD-EF-ILSTNAMQMQAGKRTLDFILDT- 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~-~~-v~~~~~~~~~~~~~~~d~vid~- 255 (360)
+++|++||-+|+| -|-.++.+++..|++|++++.+++..+.++++ .|.. .+ +...+ .......+|.|+..
T Consensus 60 l~~G~~vLDiGcG-wG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D---~~~~~~~fD~IvSi~ 135 (273)
T PF02353_consen 60 LKPGDRVLDIGCG-WGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQD---YRDLPGKFDRIVSIE 135 (273)
T ss_dssp --TT-EEEEES-T-TSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES----GGG---S-SEEEEES
T ss_pred CCCCCEEEEeCCC-ccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEee---ccccCCCCCEEEEEe
Confidence 5699999999997 46677788888899999999999988888665 3421 11 22222 22334489998763
Q ss_pred ----CCCc---ccHHHHHHHhccCCEEEE
Q 018158 256 ----VSAK---HSLGPILELLKVNGTLSV 277 (360)
Q Consensus 256 ----~g~~---~~~~~~~~~l~~~G~~v~ 277 (360)
+|.. ..+..+.++|+|+|+++.
T Consensus 136 ~~Ehvg~~~~~~~f~~~~~~LkpgG~~~l 164 (273)
T PF02353_consen 136 MFEHVGRKNYPAFFRKISRLLKPGGRLVL 164 (273)
T ss_dssp EGGGTCGGGHHHHHHHHHHHSETTEEEEE
T ss_pred chhhcChhHHHHHHHHHHHhcCCCcEEEE
Confidence 2221 237889999999999863
|
All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: |
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.014 Score=52.04 Aligned_cols=99 Identities=18% Similarity=0.147 Sum_probs=63.9
Q ss_pred CCcEEEEEcC-C--hHHHHHHHHHHHcCCeEEEEeCChhH---HHHHHHHcCCCeE--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-G--GLGHVAVKFGKAFGHHVTVISTSPSK---EKEAKELLGADEF--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g--~vG~~aiqla~~~G~~V~~~~~~~~~---~~~~~~~~g~~~~--v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ + ++|.++++.+...|++|++++++.+. .+.+.+.+|.... .|-.+.+..... ..+
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 5789999999 5 89999999998899999999877532 2333222453322 244443332221 357
Q ss_pred cCEEEEcCCCcc-----------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 249 LDFILDTVSAKH-----------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 249 ~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+|+++++.|... ..+.++..|+.+|+++.++...
T Consensus 86 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~ 148 (271)
T PRK06505 86 LDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGG 148 (271)
T ss_pred CCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCC
Confidence 999999987320 0123445566678999887654
|
|
| >PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2 | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0022 Score=54.61 Aligned_cols=96 Identities=22% Similarity=0.294 Sum_probs=63.8
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHH---cCCCeE-eeCccHHHHHhcCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKEL---LGADEF-ILSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~---~g~~~~-v~~~~~~~~~~~~~~~d~vid~ 255 (360)
+++|++||-+|+|. |..++.+++..|. +|+.++++++-.+.+++. +|.+.+ +...+..........||.|+-+
T Consensus 70 l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~~~apfD~I~v~ 148 (209)
T PF01135_consen 70 LKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWPEEAPFDRIIVT 148 (209)
T ss_dssp C-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTGGG-SEEEEEES
T ss_pred cCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhccccCCCcCEEEEe
Confidence 45999999999863 8888888888875 699999988766555554 444322 2222221111124579999998
Q ss_pred CCCcccHHHHHHHhccCCEEEEe
Q 018158 256 VSAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 256 ~g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
.+....-...++.|++||+++..
T Consensus 149 ~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 149 AAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp SBBSS--HHHHHTEEEEEEEEEE
T ss_pred eccchHHHHHHHhcCCCcEEEEE
Confidence 88776668899999999999874
|
1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A .... |
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.013 Score=51.14 Aligned_cols=75 Identities=20% Similarity=0.166 Sum_probs=53.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe---EeeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE---FILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~ 249 (360)
++++++|+|+ |++|..++..+...|++|+++++++++.+.+.+.+ +... ..|-.+.+..... ..++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 99999999999999999999999888666554432 3221 1244443332221 2579
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|.++|.
T Consensus 86 d~vi~~ag~ 94 (250)
T PRK12939 86 DGLVNNAGI 94 (250)
T ss_pred CEEEECCCC
Confidence 999999985
|
|
| >PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0064 Score=55.37 Aligned_cols=96 Identities=22% Similarity=0.184 Sum_probs=67.5
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHH---cCCCeEeeC-ccHHHHHhcCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKEL---LGADEFILS-TNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~---~g~~~~v~~-~~~~~~~~~~~~~d~vid~ 255 (360)
++++++||.+|+| .|..++.+++..+. +|++++.+++..+.++++ .|.+.+... .+..........+|+|+.+
T Consensus 78 i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~gD~~~~~~~~~~fD~Ii~~ 156 (322)
T PRK13943 78 LDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCGDGYYGVPEFAPYDVIFVT 156 (322)
T ss_pred CCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCChhhcccccCCccEEEEC
Confidence 4489999999997 49999999998864 699999999876665543 555433221 1211111112469999998
Q ss_pred CCCcccHHHHHHHhccCCEEEEe
Q 018158 256 VSAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 256 ~g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
.+........++.++++|+++..
T Consensus 157 ~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 157 VGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred CchHHhHHHHHHhcCCCCEEEEE
Confidence 87665566788999999998763
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0029 Score=56.78 Aligned_cols=71 Identities=17% Similarity=0.288 Sum_probs=52.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCC----CeEeeCccHHHHHhcCCCcCEEEEcCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGA----DEFILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~----~~~v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
.+++++|+|+|++|.+++..+...|+ +|++++|+.++.+.+.+.++. ..+....+ ....-..+|+||+|+.
T Consensus 126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~---~~~~~~~aDiVInaTp 201 (284)
T PRK12549 126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSD---LAAALAAADGLVHATP 201 (284)
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccc---hHhhhCCCCEEEECCc
Confidence 56899999999999999999999998 799999999888777664531 12222211 1122357999999975
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0062 Score=53.66 Aligned_cols=75 Identities=21% Similarity=0.177 Sum_probs=55.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhc-------CCCcCEEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAG-------KRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~-------~~~~d~vid 254 (360)
.+++++|+|+ |++|..+++.+...|++|++++++..+.+...+.++...+ .|..+.+..... ..++|+++.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5789999999 9999999999999999999999988776665554554222 344444333221 357899999
Q ss_pred cCCC
Q 018158 255 TVSA 258 (360)
Q Consensus 255 ~~g~ 258 (360)
+.|.
T Consensus 86 ~ag~ 89 (255)
T PRK06057 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 8874
|
|
| >PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0063 Score=59.10 Aligned_cols=72 Identities=15% Similarity=0.243 Sum_probs=54.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~ 260 (360)
++++++|+|.|..|++++++++..|++|++.+..+++.+.+++ +|... +...... ..-..+|+|+.+.|.+.
T Consensus 11 ~~~~v~V~G~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~-~g~~~-~~~~~~~---~~l~~~D~VV~SpGi~~ 82 (488)
T PRK03369 11 PGAPVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRPHAE-RGVAT-VSTSDAV---QQIADYALVVTSPGFRP 82 (488)
T ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHh-CCCEE-EcCcchH---hHhhcCCEEEECCCCCC
Confidence 7899999999999999999999999999999987777666666 78643 3222211 11246899999998653
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.012 Score=49.84 Aligned_cols=81 Identities=19% Similarity=0.176 Sum_probs=59.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
.|++++|+|.|.+|..+++.+...|++|++++++.++.+.+++.+|+. .++..+ .....+|+++.|......-.
T Consensus 27 ~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~-----l~~~~~Dv~vp~A~~~~I~~ 100 (200)
T cd01075 27 EGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT-VVAPEE-----IYSVDADVFAPCALGGVIND 100 (200)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEcchh-----hccccCCEEEecccccccCH
Confidence 678999999999999999999999999999999998888887756753 333211 12236899997665443445
Q ss_pred HHHHHhc
Q 018158 264 PILELLK 270 (360)
Q Consensus 264 ~~~~~l~ 270 (360)
..++.++
T Consensus 101 ~~~~~l~ 107 (200)
T cd01075 101 DTIPQLK 107 (200)
T ss_pred HHHHHcC
Confidence 5556665
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0043 Score=58.12 Aligned_cols=111 Identities=18% Similarity=0.135 Sum_probs=73.3
Q ss_pred ccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHH
Q 018158 163 LLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQ 241 (360)
Q Consensus 163 l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~ 241 (360)
+..+....+..+.+... ++++++||-+|+| .|..+..+++..|++|++++.+++..+.++++.....+ +...+
T Consensus 148 L~~Aq~~k~~~l~~~l~--l~~g~rVLDIGcG-~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D--- 221 (383)
T PRK11705 148 LEEAQEAKLDLICRKLQ--LKPGMRVLDIGCG-WGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQD--- 221 (383)
T ss_pred HHHHHHHHHHHHHHHhC--CCCCCEEEEeCCC-ccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECc---
Confidence 33344444444433333 4499999999985 47778888988899999999999999998885421111 11111
Q ss_pred HHhcCCCcCEEEEc-----CCC---cccHHHHHHHhccCCEEEEeC
Q 018158 242 MQAGKRTLDFILDT-----VSA---KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 242 ~~~~~~~~d~vid~-----~g~---~~~~~~~~~~l~~~G~~v~~g 279 (360)
.......+|.|+.. +|. ...++.+.+.|+++|.++...
T Consensus 222 ~~~l~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 222 YRDLNGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred hhhcCCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 12224579998753 232 234788889999999998653
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0045 Score=58.29 Aligned_cols=92 Identities=15% Similarity=0.137 Sum_probs=64.6
Q ss_pred EEEEcCChHHHHHHHHHHHcC-C-eEEEEeCChhHHHHHHHHcC-C---CeEeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 188 IGIVGLGGLGHVAVKFGKAFG-H-HVTVISTSPSKEKEAKELLG-A---DEFILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 188 vlI~Gag~vG~~aiqla~~~G-~-~V~~~~~~~~~~~~~~~~~g-~---~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
|+|+|+|.+|..+++.+...+ . +|++.+++.++.+.+.+++. . ...+|..+.+.+...-++.|+|++|+|....
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~~ 80 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFFG 80 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGGH
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccchh
Confidence 688999999999999888776 4 89999999999888765422 1 2335666665566666788999999987655
Q ss_pred HHHHHHHhccCCEEEEeC
Q 018158 262 LGPILELLKVNGTLSVVG 279 (360)
Q Consensus 262 ~~~~~~~l~~~G~~v~~g 279 (360)
..-+..+++.+-++++.+
T Consensus 81 ~~v~~~~i~~g~~yvD~~ 98 (386)
T PF03435_consen 81 EPVARACIEAGVHYVDTS 98 (386)
T ss_dssp HHHHHHHHHHT-EEEESS
T ss_pred HHHHHHHHHhCCCeeccc
Confidence 566667778888888843
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.012 Score=45.22 Aligned_cols=96 Identities=14% Similarity=0.179 Sum_probs=65.1
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHH---cCCC--eEeeCccHHHHHhcCCCcCEEEEcC
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKEL---LGAD--EFILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~---~g~~--~~v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
.++++++-+|+|. |..+..+++..+ .+|++++.++...+.+++. ++.. .++..+-..........+|+|+...
T Consensus 18 ~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~ 96 (124)
T TIGR02469 18 RPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPDRVFIGG 96 (124)
T ss_pred CCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCCEEEECC
Confidence 3778899999976 888888998864 5899999999877776543 3432 2222211111112235899999755
Q ss_pred CCc---ccHHHHHHHhccCCEEEEeC
Q 018158 257 SAK---HSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 257 g~~---~~~~~~~~~l~~~G~~v~~g 279 (360)
+.. ..++.+.+.|+++|+++...
T Consensus 97 ~~~~~~~~l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 97 SGGLLQEILEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred cchhHHHHHHHHHHHcCCCCEEEEEe
Confidence 332 35788999999999997653
|
This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL. |
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.012 Score=51.87 Aligned_cols=73 Identities=21% Similarity=0.206 Sum_probs=52.8
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC-CC---eEeeCccHHHHHh----c----CCCcCEE
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG-AD---EFILSTNAMQMQA----G----KRTLDFI 252 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g-~~---~~v~~~~~~~~~~----~----~~~~d~v 252 (360)
+++||+|+ |.+|..+++.+...|++|++++++.++.+.+.+.++ .. ...|-.+.+.... . ..++|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 57899999 999999999888899999999999988777765443 11 1234444332221 1 3578999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
+.+.|.
T Consensus 82 i~~ag~ 87 (260)
T PRK08267 82 FNNAGI 87 (260)
T ss_pred EECCCC
Confidence 999984
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0047 Score=55.62 Aligned_cols=75 Identities=12% Similarity=0.242 Sum_probs=50.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCh---hHHHHHHHHcC---CC---eEeeCccHHHHHhcCCCcCEEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSP---SKEKEAKELLG---AD---EFILSTNAMQMQAGKRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~---~~~~~~~~~~g---~~---~~v~~~~~~~~~~~~~~~d~vi 253 (360)
.+++++|+|+|++|.+++..+...|++ |+++.|+. ++.+.+.+.+. .. ...+..+.+.....-..+|+++
T Consensus 125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~DilI 204 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDILV 204 (289)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEEE
Confidence 578999999999999999888889995 99999986 55544443342 11 1123333222333335679999
Q ss_pred EcCCC
Q 018158 254 DTVSA 258 (360)
Q Consensus 254 d~~g~ 258 (360)
+|+..
T Consensus 205 NaTp~ 209 (289)
T PRK12548 205 NATLV 209 (289)
T ss_pred EeCCC
Confidence 99863
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0086 Score=51.98 Aligned_cols=75 Identities=19% Similarity=0.112 Sum_probs=52.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC---CeE--eeCccHHHHHh-------cCCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA---DEF--ILSTNAMQMQA-------GKRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~---~~~--v~~~~~~~~~~-------~~~~~d 250 (360)
++++++|+|+ |.+|..+++.+...|++|+++++++++.+.+.+.+.. -+. .|..+...... ...++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999999 9999999888888899999999998877666543431 111 23333322211 124799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|++.|.
T Consensus 85 ~vi~~ag~ 92 (237)
T PRK07326 85 VLIANAGV 92 (237)
T ss_pred EEEECCCC
Confidence 99998874
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.015 Score=47.25 Aligned_cols=88 Identities=20% Similarity=0.124 Sum_probs=56.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
.|++|+|+|+|.+|..-++.+...|++|++++ ++..+.+.+ ++... ...... ....-.++|+|+-+++.... +
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIs--p~~~~~l~~-l~~i~-~~~~~~--~~~dl~~a~lViaaT~d~e~-N 84 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGAFVTVVS--PEICKEMKE-LPYIT-WKQKTF--SNDDIKDAHLIYAATNQHAV-N 84 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEc--CccCHHHHh-ccCcE-EEeccc--ChhcCCCceEEEECCCCHHH-H
Confidence 68999999999999999999888999999885 333344444 54211 111111 11124679999999988764 4
Q ss_pred HHHHHhccCCEEEEe
Q 018158 264 PILELLKVNGTLSVV 278 (360)
Q Consensus 264 ~~~~~l~~~G~~v~~ 278 (360)
..+...+..+.++..
T Consensus 85 ~~i~~~a~~~~~vn~ 99 (157)
T PRK06719 85 MMVKQAAHDFQWVNV 99 (157)
T ss_pred HHHHHHHHHCCcEEE
Confidence 444444433345444
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0049 Score=54.60 Aligned_cols=75 Identities=21% Similarity=0.147 Sum_probs=54.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-eE--eeCccHHHHHh-------cCCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-EF--ILSTNAMQMQA-------GKRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~--v~~~~~~~~~~-------~~~~~d~v 252 (360)
+++++||+|+ |++|..+++.+...|++|+++++++++.+.+.+.++.. .. .|-.+.+.... ...++|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 5789999999 99999999999999999999999988887776655532 11 23333322211 13479999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|++.|.
T Consensus 85 i~~ag~ 90 (263)
T PRK06200 85 VGNAGI 90 (263)
T ss_pred EECCCC
Confidence 999873
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.024 Score=50.50 Aligned_cols=73 Identities=16% Similarity=0.214 Sum_probs=50.6
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCC--e--EeeCccHHHHHh-------cCCCcC
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGAD--E--FILSTNAMQMQA-------GKRTLD 250 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~--~--~v~~~~~~~~~~-------~~~~~d 250 (360)
++++|+|+ |++|..+++.+...|++|+++++++++.+.+.+. .+.. . ..|..+.+.... ...++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 36899999 9999999998888999999999988765554332 2332 1 234444432211 135699
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|++.|.
T Consensus 81 ~lv~~ag~ 88 (272)
T PRK07832 81 VVMNIAGI 88 (272)
T ss_pred EEEECCCC
Confidence 99999974
|
|
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0052 Score=54.52 Aligned_cols=97 Identities=16% Similarity=0.179 Sum_probs=73.7
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+....+..++..+--- .|++++|+|. ..+|.-.+.++...|++|++..+....+
T Consensus 136 ~~~PcTp~aii~lL~~~~i~l--~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l------------------ 195 (285)
T PRK14189 136 LFRPCTPYGVMKMLESIGIPL--RGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDL------------------ 195 (285)
T ss_pred CCcCCCHHHHHHHHHHcCCCC--CCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCH------------------
Confidence 356777777777777765333 7999999999 6669999999999999999876432211
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
...-+..|+++-++|....+.. ++++++..++++|...
T Consensus 196 ---~~~~~~ADIVV~avG~~~~i~~--~~ik~gavVIDVGin~ 233 (285)
T PRK14189 196 ---AAHTRQADIVVAAVGKRNVLTA--DMVKPGATVIDVGMNR 233 (285)
T ss_pred ---HHHhhhCCEEEEcCCCcCccCH--HHcCCCCEEEEccccc
Confidence 1224578999999998765444 8999999999999754
|
|
| >PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.01 Score=50.81 Aligned_cols=95 Identities=23% Similarity=0.321 Sum_probs=65.3
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHc---CCCe--EeeCccHHHHHhcCCCcCEEEE
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFG--HHVTVISTSPSKEKEAKELL---GADE--FILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G--~~V~~~~~~~~~~~~~~~~~---g~~~--~v~~~~~~~~~~~~~~~d~vid 254 (360)
++++++||-+|+|. |..+..+++..+ .+|+.++.+++-.+.+++++ |... ++..+..... .....||+|+-
T Consensus 74 ~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~-~~~~~fD~I~~ 151 (212)
T PRK13942 74 LKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGY-EENAPYDRIYV 151 (212)
T ss_pred CCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC-CcCCCcCEEEE
Confidence 44999999999863 777777887765 58999999998877776643 4322 2222111111 11357999986
Q ss_pred cCCCcccHHHHHHHhccCCEEEEe
Q 018158 255 TVSAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 255 ~~g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
............+.|++||+++..
T Consensus 152 ~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 152 TAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred CCCcccchHHHHHhhCCCcEEEEE
Confidence 655555668899999999998765
|
|
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0098 Score=47.12 Aligned_cols=97 Identities=12% Similarity=0.030 Sum_probs=72.8
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||........+++.+.-- .|++++|+|. ..+|.-++.++...|++|+.+.++...++.
T Consensus 6 ~~~p~t~~a~~~ll~~~~~~~--~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~---------------- 67 (140)
T cd05212 6 LFVSPVAKAVKELLNKEGVRL--DGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS---------------- 67 (140)
T ss_pred cccccHHHHHHHHHHHcCCCC--CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH----------------
Confidence 356677666666676665322 7999999999 999999999999999999999865432221
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.-+..|+++.++|....+. -+++++|-.++++|...
T Consensus 68 -----~v~~ADIVvsAtg~~~~i~--~~~ikpGa~Vidvg~~~ 103 (140)
T cd05212 68 -----KVHDADVVVVGSPKPEKVP--TEWIKPGATVINCSPTK 103 (140)
T ss_pred -----HHhhCCEEEEecCCCCccC--HHHcCCCCEEEEcCCCc
Confidence 2356899999999874433 47899999999888654
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >PRK08618 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0066 Score=55.67 Aligned_cols=93 Identities=19% Similarity=0.205 Sum_probs=66.6
Q ss_pred CCcEEEEEcCChHHHHHHHHH-HHcCC-eEEEEeCChhHHHHHHHHc----CCCeEeeCccHHHHHhcCCCcCEEEEcCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFG-KAFGH-HVTVISTSPSKEKEAKELL----GADEFILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla-~~~G~-~V~~~~~~~~~~~~~~~~~----g~~~~v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
..+++.|+|+|..|...+..+ ...++ +|.++++++++.+.+.+.+ +.+ +....+. .+.-...|+|+.|++
T Consensus 126 ~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~~~---~~~~~~aDiVi~aT~ 201 (325)
T PRK08618 126 DAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVNSA---DEAIEEADIIVTVTN 201 (325)
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeCCH---HHHHhcCCEEEEccC
Confidence 467899999999998776554 45677 6999999998877666533 432 2222332 223367999999998
Q ss_pred CcccHHHHHHHhccCCEEEEeCCCC
Q 018158 258 AKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 258 ~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
....+-. +++++|-++..+|...
T Consensus 202 s~~p~i~--~~l~~G~hV~~iGs~~ 224 (325)
T PRK08618 202 AKTPVFS--EKLKKGVHINAVGSFM 224 (325)
T ss_pred CCCcchH--HhcCCCcEEEecCCCC
Confidence 7754333 8999999999999765
|
|
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0083 Score=54.59 Aligned_cols=91 Identities=21% Similarity=0.335 Sum_probs=64.4
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc--
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS-- 261 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~-- 261 (360)
.+|.|+|+|.+|...+..++..|. +|+++++++++.+.+++ .|....+.. +. .......|+||.|+.....
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~-~g~~~~~~~-~~---~~~~~~aDvViiavp~~~~~~ 81 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARE-LGLGDRVTT-SA---AEAVKGADLVILCVPVGASGA 81 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHh-CCCCceecC-CH---HHHhcCCCEEEECCCHHHHHH
Confidence 579999999999999999888885 79999999998888877 775322211 11 1223578999999986432
Q ss_pred -HHHHHHHhccCCEEEEeCCC
Q 018158 262 -LGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 262 -~~~~~~~l~~~G~~v~~g~~ 281 (360)
+..+...++++..++++|..
T Consensus 82 v~~~l~~~l~~~~iv~dvgs~ 102 (307)
T PRK07502 82 VAAEIAPHLKPGAIVTDVGSV 102 (307)
T ss_pred HHHHHHhhCCCCCEEEeCccc
Confidence 23344456677777777653
|
|
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.006 Score=54.11 Aligned_cols=97 Identities=15% Similarity=0.074 Sum_probs=74.4
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
...||+..+.+..++..+.-- .|++++|+|- ..+|.-+++++...|++|++..+....+
T Consensus 137 ~~~PcTp~av~~ll~~~~i~l--~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l------------------ 196 (285)
T PRK10792 137 LLRPCTPRGIMTLLERYGIDT--YGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNL------------------ 196 (285)
T ss_pred CCCCCCHHHHHHHHHHcCCCC--CCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCH------------------
Confidence 356888777788887765322 6999999999 6699999999999999999998543221
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.+..+.+|+++.++|....+.. ++++++..++++|...
T Consensus 197 ---~~~~~~ADIvi~avG~p~~v~~--~~vk~gavVIDvGin~ 234 (285)
T PRK10792 197 ---RHHVRNADLLVVAVGKPGFIPG--EWIKPGAIVIDVGINR 234 (285)
T ss_pred ---HHHHhhCCEEEEcCCCcccccH--HHcCCCcEEEEccccc
Confidence 1224579999999998865443 8899999999999643
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.022 Score=50.92 Aligned_cols=99 Identities=16% Similarity=0.159 Sum_probs=65.7
Q ss_pred CCcEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCChh---HHHHHHHHcCCCeE--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL---GGLGHVAVKFGKAFGHHVTVISTSPS---KEKEAKELLGADEF--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga---g~vG~~aiqla~~~G~~V~~~~~~~~---~~~~~~~~~g~~~~--v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ +++|.++++.+...|++|++++++.+ +.+.+.+.++.... .|-.+.+..... ..+
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 5789999997 48999999988889999999998753 34444333553322 344443322211 357
Q ss_pred cCEEEEcCCCcc-----------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 249 LDFILDTVSAKH-----------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 249 ~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+|+++++.|... ..+.++..|+.+|+++.++...
T Consensus 84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~ 146 (274)
T PRK08415 84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG 146 (274)
T ss_pred CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence 999999988410 1345566677789999887644
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.016 Score=50.85 Aligned_cols=74 Identities=20% Similarity=0.082 Sum_probs=52.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc----CCC---e-EeeCccHHHHHhc-------CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL----GAD---E-FILSTNAMQMQAG-------KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g~~---~-~v~~~~~~~~~~~-------~~ 247 (360)
.+++++|+|+ |.+|...+..+...|++|++++++.++.+.+.+.+ +.. . ..|-.+.+..... ..
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5789999999 99999999999999999999999888766554433 221 1 2244444333222 24
Q ss_pred CcCEEEEcCC
Q 018158 248 TLDFILDTVS 257 (360)
Q Consensus 248 ~~d~vid~~g 257 (360)
++|++|++.+
T Consensus 83 ~id~vi~~A~ 92 (256)
T PRK09186 83 KIDGAVNCAY 92 (256)
T ss_pred CccEEEECCc
Confidence 5899999885
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.019 Score=50.24 Aligned_cols=97 Identities=19% Similarity=0.138 Sum_probs=61.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHH---cCCCe---EeeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPS-KEKEAKEL---LGADE---FILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~-~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~ 248 (360)
.+++++|+|+ |.+|..++..+...|++|+++.++.+ +.+.+... .+... ..|..+.+..... ..+
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 5689999999 99999999988889999999888653 33333221 23221 1244444332211 246
Q ss_pred cCEEEEcCCCc-------------------ccHHHHHHHhccCCEEEEeCC
Q 018158 249 LDFILDTVSAK-------------------HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 249 ~d~vid~~g~~-------------------~~~~~~~~~l~~~G~~v~~g~ 280 (360)
+|+++.+.|.. ..++.+...++..|+++.++.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 89999887642 123445555556688888865
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.012 Score=49.99 Aligned_cols=93 Identities=18% Similarity=0.096 Sum_probs=58.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS-KEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~-~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
.|++|||+|+|.+|...+..+...|++|+++.+... .+..+.. -+.- ....... ....-.++|+||-+++....-
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~-~~~i-~~~~~~~--~~~~l~~adlViaaT~d~elN 84 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTENLVKLVE-EGKI-RWKQKEF--EPSDIVDAFLVIAATNDPRVN 84 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHh-CCCE-EEEecCC--ChhhcCCceEEEEcCCCHHHH
Confidence 688999999999999999988889999999986532 2233222 2211 1111111 111235799999999988654
Q ss_pred HHHHHHhccCCEEEEeCCC
Q 018158 263 GPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~~ 281 (360)
..+.... ..+.++.....
T Consensus 85 ~~i~~~a-~~~~lvn~~d~ 102 (202)
T PRK06718 85 EQVKEDL-PENALFNVITD 102 (202)
T ss_pred HHHHHHH-HhCCcEEECCC
Confidence 4444444 44566666443
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0063 Score=54.40 Aligned_cols=97 Identities=16% Similarity=0.124 Sum_probs=74.6
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+....+..|+..+.-- .|++|.|+|. +.+|.-.+.++...|++|++..+.....
T Consensus 137 ~~~PcTp~aii~lL~~~~i~l--~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l------------------ 196 (301)
T PRK14194 137 VLTPCTPSGCLRLLEDTCGDL--TGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDA------------------ 196 (301)
T ss_pred CCCCCcHHHHHHHHHHhCCCC--CCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCH------------------
Confidence 457888777787887765323 7999999999 6999999999999999999997554311
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.+..+..|+|+-++|....+... ++++|..++++|...
T Consensus 197 ---~e~~~~ADIVIsavg~~~~v~~~--~ik~GaiVIDvgin~ 234 (301)
T PRK14194 197 ---KALCRQADIVVAAVGRPRLIDAD--WLKPGAVVIDVGINR 234 (301)
T ss_pred ---HHHHhcCCEEEEecCChhcccHh--hccCCcEEEEecccc
Confidence 12235689999999988665554 489999999998653
|
|
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0064 Score=54.07 Aligned_cols=78 Identities=15% Similarity=0.267 Sum_probs=55.5
Q ss_pred hhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCC
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRT 248 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~ 248 (360)
.+.+++..+ ...+++++|+|+|+.+.+++..+...|+ +|+++.|+.++.+.+.+.++... .+ .. ....
T Consensus 110 f~~~L~~~~---~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~----~~--~~--~~~~ 178 (272)
T PRK12550 110 IAKLLASYQ---VPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEW----RP--DL--GGIE 178 (272)
T ss_pred HHHHHHhcC---CCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcc----hh--hc--cccc
Confidence 344554433 2256789999999999999999999998 59999999998887776554211 10 11 1245
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|+++||+..
T Consensus 179 ~dlvINaTp~ 188 (272)
T PRK12550 179 ADILVNVTPI 188 (272)
T ss_pred CCEEEECCcc
Confidence 8999999863
|
|
| >COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.015 Score=50.26 Aligned_cols=99 Identities=20% Similarity=0.260 Sum_probs=73.3
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCC---CeE-eeCccHHHHHhcCCCcCEEEEcCC
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGA---DEF-ILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~---~~~-v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
.+|++||=+|+| .|-.+..+++..|- +|++++.+++-++.++++... ..+ +...+.+.+.-....+|+|..+.|
T Consensus 50 ~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LPf~D~sFD~vt~~fg 128 (238)
T COG2226 50 KPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLPFPDNSFDAVTISFG 128 (238)
T ss_pred CCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhCCCCCCccCEEEeeeh
Confidence 389999988876 48899999999874 799999999999999887542 111 112222233323677999988777
Q ss_pred C------cccHHHHHHHhccCCEEEEeCCCC
Q 018158 258 A------KHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 258 ~------~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
- ..++.++.+.++|+|+++.+-...
T Consensus 129 lrnv~d~~~aL~E~~RVlKpgG~~~vle~~~ 159 (238)
T COG2226 129 LRNVTDIDKALKEMYRVLKPGGRLLVLEFSK 159 (238)
T ss_pred hhcCCCHHHHHHHHHHhhcCCeEEEEEEcCC
Confidence 2 346899999999999998887654
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.013 Score=53.46 Aligned_cols=94 Identities=17% Similarity=0.182 Sum_probs=64.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe-eCccHHHHHhcCCCcCEEEEcCCCcc----
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI-LSTNAMQMQAGKRTLDFILDTVSAKH---- 260 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~~~~~d~vid~~g~~~---- 260 (360)
+|+|+|+ |-+|..+++.+...|.+|++++|+.++...+.. .+.+.+. |..+.+.....-.++|+||++++...
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~-~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~ 80 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKE-WGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLY 80 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhh-cCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCcc
Confidence 6899999 999999999998899999999998766554444 4543332 44444455555568999999876321
Q ss_pred --------cHHHHHHHhccCC--EEEEeCCC
Q 018158 261 --------SLGPILELLKVNG--TLSVVGAP 281 (360)
Q Consensus 261 --------~~~~~~~~l~~~G--~~v~~g~~ 281 (360)
....+++.++..| +++.++..
T Consensus 81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred chhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 1134455555544 78877653
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.009 Score=52.86 Aligned_cols=75 Identities=17% Similarity=0.104 Sum_probs=53.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe-E--eeCccHHHHHh----c---CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE-F--ILSTNAMQMQA----G---KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-~--v~~~~~~~~~~----~---~~~~d~v 252 (360)
.+++++|+|+ |++|..+++.+...|++|++++++.++.+.+++..+... . .|..+.+.... . ..++|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5789999999 999999999999999999999999887777766344221 1 23333322211 1 3578999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
+++.|.
T Consensus 84 i~~Ag~ 89 (262)
T TIGR03325 84 IPNAGI 89 (262)
T ss_pred EECCCC
Confidence 999873
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.021 Score=50.92 Aligned_cols=74 Identities=18% Similarity=0.165 Sum_probs=52.7
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe-E--eeCccHHHHHhc-------CCCcCEEE
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE-F--ILSTNAMQMQAG-------KRTLDFIL 253 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-~--v~~~~~~~~~~~-------~~~~d~vi 253 (360)
+++++|+|+ |.+|..+++.+...|++|++++++.++++.+.+.++... . .|..+.+..... -.++|++|
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999999 999999988888889999999999888777666444221 1 233333222111 34789999
Q ss_pred EcCCC
Q 018158 254 DTVSA 258 (360)
Q Consensus 254 d~~g~ 258 (360)
.+.|.
T Consensus 83 ~~ag~ 87 (275)
T PRK08263 83 NNAGY 87 (275)
T ss_pred ECCCC
Confidence 99984
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.025 Score=49.55 Aligned_cols=72 Identities=18% Similarity=0.307 Sum_probs=52.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHh-------cCCCcCEEEEc
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQA-------GKRTLDFILDT 255 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~-------~~~~~d~vid~ 255 (360)
+++|+|+ |++|..++..+...|++|+++++++++.+.+...++.+.. .|-.+.+.... ...++|.++.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 6899999 9999999999999999999999998887776654553321 23333322221 13579999998
Q ss_pred CCC
Q 018158 256 VSA 258 (360)
Q Consensus 256 ~g~ 258 (360)
.|.
T Consensus 82 ag~ 84 (248)
T PRK10538 82 AGL 84 (248)
T ss_pred CCc
Confidence 874
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0085 Score=52.91 Aligned_cols=76 Identities=16% Similarity=0.149 Sum_probs=54.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC----eEeeCccHHHHHhc-------CCCcCE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD----EFILSTNAMQMQAG-------KRTLDF 251 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~----~~v~~~~~~~~~~~-------~~~~d~ 251 (360)
+++++||+|+ |.+|..+++.+...|++|++++++.+..+.+.+.++.. ...|..+.+..... -.++|+
T Consensus 10 ~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 89 (264)
T PRK12829 10 DGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLDV 89 (264)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 7799999999 99999999999999999999999887776665533322 12244443322211 247999
Q ss_pred EEEcCCCc
Q 018158 252 ILDTVSAK 259 (360)
Q Consensus 252 vid~~g~~ 259 (360)
||.+.|..
T Consensus 90 vi~~ag~~ 97 (264)
T PRK12829 90 LVNNAGIA 97 (264)
T ss_pred EEECCCCC
Confidence 99988753
|
|
| >PRK04457 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.027 Score=49.89 Aligned_cols=94 Identities=21% Similarity=0.275 Sum_probs=66.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHcCC----C--eEeeCccHHHHHhcCCCcCEEE-Ec
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKELLGA----D--EFILSTNAMQMQAGKRTLDFIL-DT 255 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~~g~----~--~~v~~~~~~~~~~~~~~~d~vi-d~ 255 (360)
++++||++|.|+ |.++..+++.. +.+|++++.+++-.+.+++.++. . .++..+..+.......++|+|+ |.
T Consensus 66 ~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~Da~~~l~~~~~~yD~I~~D~ 144 (262)
T PRK04457 66 RPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEADGAEYIAVHRHSTDVILVDG 144 (262)
T ss_pred CCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEECCHHHHHHhCCCCCCEEEEeC
Confidence 567899999964 77777787776 56899999999999998886652 1 2333332333444456899997 44
Q ss_pred CCC---------cccHHHHHHHhccCCEEEEe
Q 018158 256 VSA---------KHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 256 ~g~---------~~~~~~~~~~l~~~G~~v~~ 278 (360)
... ...+..+.+.|+++|.++..
T Consensus 145 ~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin 176 (262)
T PRK04457 145 FDGEGIIDALCTQPFFDDCRNALSSDGIFVVN 176 (262)
T ss_pred CCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence 321 23468889999999999763
|
|
| >PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0032 Score=63.29 Aligned_cols=75 Identities=15% Similarity=0.225 Sum_probs=55.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChh---------------------HHHHHHHHcCCCeEeeCccH--H
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS---------------------KEKEAKELLGADEFILSTNA--M 240 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~---------------------~~~~~~~~~g~~~~v~~~~~--~ 240 (360)
.+++|+|+|+|+.|+.++..++..|++|+++++.+. +.+.+++ +|.+..++..-. .
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~-~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTA-MGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHH-CCeEEEcCCccCCcC
Confidence 489999999999999999999999999999987652 4455566 887655443211 1
Q ss_pred HHHhcCCCcCEEEEcCCCc
Q 018158 241 QMQAGKRTLDFILDTVSAK 259 (360)
Q Consensus 241 ~~~~~~~~~d~vid~~g~~ 259 (360)
.+.....++|+||.++|..
T Consensus 388 ~~~~l~~~~DaV~latGa~ 406 (639)
T PRK12809 388 TFSDLTSEYDAVFIGVGTY 406 (639)
T ss_pred CHHHHHhcCCEEEEeCCCC
Confidence 1222345799999999864
|
|
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0074 Score=54.00 Aligned_cols=74 Identities=14% Similarity=0.233 Sum_probs=51.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcC----CCeEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLG----ADEFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g----~~~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
.+++++|+|+|+.+.+++..+...|+ +++++.|+.++.+.+.+.+. ...+. ..+..........+|+|+||+..
T Consensus 126 ~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~-~~~~~~~~~~~~~~divINaTp~ 204 (283)
T PRK14027 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV-GVDARGIEDVIAAADGVVNATPM 204 (283)
T ss_pred CCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE-ecCHhHHHHHHhhcCEEEEcCCC
Confidence 57899999999999999888888998 69999999998877766443 21111 11111111122468999999864
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.025 Score=50.05 Aligned_cols=75 Identities=19% Similarity=0.227 Sum_probs=49.1
Q ss_pred CCcEEEEEcC-C--hHHHHHHHHHHHcCCeEEEEeCChh---HHHHHHHHcCCCeE--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-G--GLGHVAVKFGKAFGHHVTVISTSPS---KEKEAKELLGADEF--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g--~vG~~aiqla~~~G~~V~~~~~~~~---~~~~~~~~~g~~~~--v~~~~~~~~~~~-------~~~ 248 (360)
.+++++|+|+ + ++|.++++.+...|++|+++++++. ..+.+.+..|.... .|-.+.+..... ..+
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999 5 7999998888888999999887742 23333332453322 344444332211 356
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|+++++.|.
T Consensus 87 iDilVnnag~ 96 (260)
T PRK06603 87 FDFLLHGMAF 96 (260)
T ss_pred ccEEEEcccc
Confidence 9999998873
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0089 Score=53.31 Aligned_cols=94 Identities=18% Similarity=0.119 Sum_probs=63.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC---CeEeeCccHHHHHhcCCCcCEEEEcCCCcc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA---DEFILSTNAMQMQAGKRTLDFILDTVSAKH 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~---~~~v~~~~~~~~~~~~~~~d~vid~~g~~~ 260 (360)
.+++++|+|+|++|.+++..+...|++|+++.|+.++.+.+.+.++. ...+. .+. .....+|++|+|++...
T Consensus 116 ~~k~vliiGaGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~---~~~--~~~~~~DivInatp~gm 190 (270)
T TIGR00507 116 PNQRVLIIGAGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFS---MDE--LPLHRVDLIINATSAGM 190 (270)
T ss_pred cCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEec---hhh--hcccCccEEEECCCCCC
Confidence 57899999999999999888888899999999998887666654432 12211 111 12246999999998531
Q ss_pred --cH---HHHHHHhccCCEEEEeCCCC
Q 018158 261 --SL---GPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 261 --~~---~~~~~~l~~~G~~v~~g~~~ 282 (360)
.. ......++++..++++...+
T Consensus 191 ~~~~~~~~~~~~~l~~~~~v~D~~y~p 217 (270)
T TIGR00507 191 SGNIDEPPVPAEKLKEGMVVYDMVYNP 217 (270)
T ss_pred CCCCCCCCCCHHHcCCCCEEEEeccCC
Confidence 01 11235567777777775433
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0071 Score=57.10 Aligned_cols=75 Identities=13% Similarity=0.216 Sum_probs=57.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
.+++++|+|+|.+|.+++..+...|+ +++++.|+.++.+.+.+.++...++... .....-..+|+||+|++.+..
T Consensus 180 ~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~---~l~~~l~~aDiVI~aT~a~~~ 255 (414)
T PRK13940 180 SSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS---ELPQLIKKADIIIAAVNVLEY 255 (414)
T ss_pred cCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH---HHHHHhccCCEEEECcCCCCe
Confidence 57899999999999999999999997 6999999988887777767632333322 223334679999999997653
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0072 Score=53.07 Aligned_cols=73 Identities=23% Similarity=0.262 Sum_probs=50.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHcCCCe--EeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPS-KEKEAKELLGADE--FILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~-~~~~~~~~~g~~~--~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
.+++++|+|+ |++|..+++.+...|++|++++++.. +..... .+... ..|-.+.+.....-.++|++|+++|.
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~ 89 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND--ESPNEWIKWECGKEESLDKQLASLDVLILNHGI 89 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc--cCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence 4789999999 99999999999999999999998762 222211 12111 23444444444444579999999974
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.028 Score=49.49 Aligned_cols=98 Identities=13% Similarity=0.095 Sum_probs=63.0
Q ss_pred CCcEEEEEcCC---hHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe----EeeCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGLG---GLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE----FILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Gag---~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~----~v~~~~~~~~~~-------~~~~~ 249 (360)
.+++++|+|++ ++|.++++.+...|++|++++++++..+.+++ +.... ..|-.+.+.... ...++
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQK-LVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHh-hccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999984 89999988888899999999987543344444 32111 123333322221 13569
Q ss_pred CEEEEcCCCcc-----------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 250 DFILDTVSAKH-----------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 250 d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
|+++++.|... ..+.++..++.+|+++.++...
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~ 146 (252)
T PRK06079 85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFG 146 (252)
T ss_pred CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccC
Confidence 99999887320 0233455666778998886544
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.042 Score=48.54 Aligned_cols=99 Identities=21% Similarity=0.206 Sum_probs=63.6
Q ss_pred CCcEEEEEcCC---hHHHHHHHHHHHcCCeEEEEeCChhH---HHHHHHHcCCCeE--eeCccHHHHHh-------cCCC
Q 018158 184 AKKRIGIVGLG---GLGHVAVKFGKAFGHHVTVISTSPSK---EKEAKELLGADEF--ILSTNAMQMQA-------GKRT 248 (360)
Q Consensus 184 ~~~~vlI~Gag---~vG~~aiqla~~~G~~V~~~~~~~~~---~~~~~~~~g~~~~--v~~~~~~~~~~-------~~~~ 248 (360)
.++++||+|++ ++|.++++.+...|++|++++++.+. .+.+.+.++.... .|-.+.+.... ...+
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 57899999983 89999998888899999999987543 2333332443222 23333322221 1357
Q ss_pred cCEEEEcCCCcc-----------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 249 LDFILDTVSAKH-----------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 249 ~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+|+++++.|... ..+.++..|+.+|+++.++...
T Consensus 89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~ 151 (258)
T PRK07533 89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYG 151 (258)
T ss_pred CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence 999999887310 1244566677778998876543
|
|
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0058 Score=49.52 Aligned_cols=98 Identities=15% Similarity=0.183 Sum_probs=64.4
Q ss_pred cccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCcc
Q 018158 160 AAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN 238 (360)
Q Consensus 160 aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~ 238 (360)
...+||+....+..++..+--- .|++++|+|. ..+|.-+..++...|++|+........++.
T Consensus 13 ~~~~PcTp~aii~lL~~~~~~l--~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~--------------- 75 (160)
T PF02882_consen 13 PGFVPCTPLAIIELLEYYGIDL--EGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE--------------- 75 (160)
T ss_dssp TSS--HHHHHHHHHHHHTT-ST--TT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH---------------
T ss_pred CCCcCCCHHHHHHHHHhcCCCC--CCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc---------------
Confidence 3567777777777787765333 7999999999 789999999999999999998865433222
Q ss_pred HHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 239 AMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 239 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.-+..|+|+.++|....+. -++++++..++++|...
T Consensus 76 ------~~~~ADIVVsa~G~~~~i~--~~~ik~gavVIDvG~~~ 111 (160)
T PF02882_consen 76 ------ITRRADIVVSAVGKPNLIK--ADWIKPGAVVIDVGINY 111 (160)
T ss_dssp ------HHTTSSEEEE-SSSTT-B---GGGS-TTEEEEE--CEE
T ss_pred ------eeeeccEEeeeeccccccc--cccccCCcEEEecCCcc
Confidence 1246899999999875433 25889998889998754
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.012 Score=52.81 Aligned_cols=75 Identities=11% Similarity=0.152 Sum_probs=49.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCh---hHHHHHHHHcCCC-----eEeeCccHHHHHhcCCCcCEEEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSP---SKEKEAKELLGAD-----EFILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~---~~~~~~~~~~g~~-----~~v~~~~~~~~~~~~~~~d~vid 254 (360)
.+++++|+|+|+.+.+++..+...|+ +|+++.|+. ++.+.+.+.++.. .+....+...+.....++|+|++
T Consensus 123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivIN 202 (288)
T PRK12749 123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTN 202 (288)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEEE
Confidence 57899999998889987777777898 799999984 4555555545421 11111111112223457999999
Q ss_pred cCCC
Q 018158 255 TVSA 258 (360)
Q Consensus 255 ~~g~ 258 (360)
|+..
T Consensus 203 aTp~ 206 (288)
T PRK12749 203 GTKV 206 (288)
T ss_pred CCCC
Confidence 9864
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.026 Score=49.90 Aligned_cols=75 Identities=16% Similarity=0.242 Sum_probs=52.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc--CCC-eE--eeCccHHHHHhc------CCCcCE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL--GAD-EF--ILSTNAMQMQAG------KRTLDF 251 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~--g~~-~~--v~~~~~~~~~~~------~~~~d~ 251 (360)
+++++||+|+ |++|...++.+...|++|+++++++++.+.+.+.+ +.. .. .|-.+.+..... .+++|+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 4678999999 99999999888889999999999988776665433 211 11 233333222111 357899
Q ss_pred EEEcCCC
Q 018158 252 ILDTVSA 258 (360)
Q Consensus 252 vid~~g~ 258 (360)
++.++|.
T Consensus 84 lv~~ag~ 90 (263)
T PRK09072 84 LINNAGV 90 (263)
T ss_pred EEECCCC
Confidence 9999874
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.035 Score=48.76 Aligned_cols=75 Identities=17% Similarity=0.178 Sum_probs=52.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe---EeeCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE---FILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~-------~~~~~ 249 (360)
.++++||+|+ |.+|...++.+...|++|++++++.++.+.+...+ +... ..|..+.+.... ...++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999 99999999988888999999999988765554322 3221 123333332221 13479
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|.++|.
T Consensus 83 d~vi~~a~~ 91 (258)
T PRK12429 83 DILVNNAGI 91 (258)
T ss_pred CEEEECCCC
Confidence 999998873
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.026 Score=44.14 Aligned_cols=87 Identities=24% Similarity=0.210 Sum_probs=62.1
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
++.+++++|.| .|...++.+...|.+|++++.+++..+.+++ .+.+.+.+.-- +.-...-+++|+++..-.......
T Consensus 16 ~~~kileIG~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~-~~~~~v~dDlf-~p~~~~y~~a~liysirpp~el~~ 92 (134)
T PRK04148 16 KNKKIVELGIG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKK-LGLNAFVDDLF-NPNLEIYKNAKLIYSIRPPRDLQP 92 (134)
T ss_pred cCCEEEEEEec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH-hCCeEEECcCC-CCCHHHHhcCCEEEEeCCCHHHHH
Confidence 56889999999 8875566666789999999999999998888 66543332111 111123568999999888777666
Q ss_pred HHHHHhccCC
Q 018158 264 PILELLKVNG 273 (360)
Q Consensus 264 ~~~~~l~~~G 273 (360)
.+++..+.-+
T Consensus 93 ~~~~la~~~~ 102 (134)
T PRK04148 93 FILELAKKIN 102 (134)
T ss_pred HHHHHHHHcC
Confidence 7777766544
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.015 Score=51.48 Aligned_cols=75 Identities=20% Similarity=0.248 Sum_probs=53.3
Q ss_pred CCcEEEEEcC-C-hHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH----cCCCeE----eeCccHHHHHhc-------C
Q 018158 184 AKKRIGIVGL-G-GLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL----LGADEF----ILSTNAMQMQAG-------K 246 (360)
Q Consensus 184 ~~~~vlI~Ga-g-~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~----~g~~~~----v~~~~~~~~~~~-------~ 246 (360)
.+++++|+|+ | ++|.++++.+...|++|++++++.++++...+. +|...+ .|..+.+..... .
T Consensus 16 ~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 95 (262)
T PRK07831 16 AGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERL 95 (262)
T ss_pred CCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 6899999998 6 799999999999999999999988776555432 343222 244443322211 3
Q ss_pred CCcCEEEEcCCC
Q 018158 247 RTLDFILDTVSA 258 (360)
Q Consensus 247 ~~~d~vid~~g~ 258 (360)
.++|++|++.|.
T Consensus 96 g~id~li~~ag~ 107 (262)
T PRK07831 96 GRLDVLVNNAGL 107 (262)
T ss_pred CCCCEEEECCCC
Confidence 578999999984
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.011 Score=52.39 Aligned_cols=75 Identities=17% Similarity=0.181 Sum_probs=53.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC-eE--eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD-EF--ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~~--v~~~~~~~~~~~-------~~~~ 249 (360)
+++++||+|+ |++|...++.+...|++|++++++.++.+.+.+.+ +.. .+ .|..+.+..... ..++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 88 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL 88 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 99999999999889999999999987766554432 321 11 344444333211 3479
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|+++|.
T Consensus 89 d~vi~~Ag~ 97 (263)
T PRK07814 89 DIVVNNVGG 97 (263)
T ss_pred CEEEECCCC
Confidence 999999873
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0067 Score=54.81 Aligned_cols=75 Identities=17% Similarity=0.219 Sum_probs=52.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe-E--eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE-F--ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~-~--v~~~~~~~~~~~-------~~~~ 249 (360)
.+++++|+|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +.+. . .|-.+.+..... ..++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999999 99999999988888999999999988776654432 3221 1 233333222111 3479
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|+++++.|.
T Consensus 119 d~li~~AG~ 127 (293)
T PRK05866 119 DILINNAGR 127 (293)
T ss_pred CEEEECCCC
Confidence 999999874
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.011 Score=52.47 Aligned_cols=75 Identities=13% Similarity=0.180 Sum_probs=53.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc----CCCeE----eeCccHHHHHh-------cCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL----GADEF----ILSTNAMQMQA-------GKR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g~~~~----v~~~~~~~~~~-------~~~ 247 (360)
.+++++|+|+ +++|..+++.+...|++|++++++.++.+.+.+.+ +...+ .|-.+.+.... ...
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 5789999999 99999999999999999999999988766544322 21111 24444433221 135
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|++++++|.
T Consensus 87 ~id~li~~Ag~ 97 (265)
T PRK07062 87 GVDMLVNNAGQ 97 (265)
T ss_pred CCCEEEECCCC
Confidence 69999999984
|
|
| >PRK10258 biotin biosynthesis protein BioC; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.035 Score=48.86 Aligned_cols=96 Identities=16% Similarity=0.269 Sum_probs=63.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCC-----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSA----- 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~----- 258 (360)
++.+||-+|+|. |..+..+++ .|.+|++++.+++.++.++++......+..+ .....-....+|+|+....-
T Consensus 42 ~~~~vLDiGcG~-G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d-~~~~~~~~~~fD~V~s~~~l~~~~d 118 (251)
T PRK10258 42 KFTHVLDAGCGP-GWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAGD-IESLPLATATFDLAWSNLAVQWCGN 118 (251)
T ss_pred CCCeEEEeeCCC-CHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEcC-cccCcCCCCcEEEEEECchhhhcCC
Confidence 567899999965 665555554 5889999999999999888844332222211 11111124569999865431
Q ss_pred -cccHHHHHHHhccCCEEEEeCCCC
Q 018158 259 -KHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 259 -~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
...+.++.+.++++|.++......
T Consensus 119 ~~~~l~~~~~~Lk~gG~l~~~~~~~ 143 (251)
T PRK10258 119 LSTALRELYRVVRPGGVVAFTTLVQ 143 (251)
T ss_pred HHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 234788899999999998775433
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.01 Score=52.39 Aligned_cols=75 Identities=19% Similarity=0.169 Sum_probs=53.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC-----CC---eEeeCccHHHHHhc-------CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG-----AD---EFILSTNAMQMQAG-------KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g-----~~---~~v~~~~~~~~~~~-------~~ 247 (360)
.+++++|+|+ |++|..+++.+...|++|+++++++++.+.+.+.+. .. ...|..+.+..... ..
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 5789999999 999999999998999999999998887766554332 11 11233333322221 35
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|++|++.|.
T Consensus 86 ~id~li~~ag~ 96 (260)
T PRK07063 86 PLDVLVNNAGI 96 (260)
T ss_pred CCcEEEECCCc
Confidence 79999999883
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.017 Score=56.01 Aligned_cols=98 Identities=21% Similarity=0.302 Sum_probs=66.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS- 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~- 261 (360)
.+.+|+|+|+|.+|.+++..+...|+ +|+++.++.++.+.+.+.++...+ .....+.....-.+.|+||.|++....
T Consensus 265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~~~dl~~al~~aDVVIsAT~s~~pv 343 (519)
T PLN00203 265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKPLDEMLACAAEADVVFTSTSSETPL 343 (519)
T ss_pred CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-EeecHhhHHHHHhcCCEEEEccCCCCCe
Confidence 37899999999999999999999998 699999999998888776642211 111112222334689999999876543
Q ss_pred -HHHHHHHhcc-----CC--EEEEeCCCC
Q 018158 262 -LGPILELLKV-----NG--TLSVVGAPE 282 (360)
Q Consensus 262 -~~~~~~~l~~-----~G--~~v~~g~~~ 282 (360)
....+..+.+ +. .+++++.+.
T Consensus 344 I~~e~l~~~~~~~~~~~~~~~~IDLAvPR 372 (519)
T PLN00203 344 FLKEHVEALPPASDTVGGKRLFVDISVPR 372 (519)
T ss_pred eCHHHHHHhhhcccccCCCeEEEEeCCCC
Confidence 2344444422 12 467777654
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.04 Score=49.12 Aligned_cols=99 Identities=18% Similarity=0.141 Sum_probs=63.6
Q ss_pred CCcEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCCh---hHHHHHHHHcCCCeE--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL---GGLGHVAVKFGKAFGHHVTVISTSP---SKEKEAKELLGADEF--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga---g~vG~~aiqla~~~G~~V~~~~~~~---~~~~~~~~~~g~~~~--v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ +++|.++++.+...|++|+++.+++ ++.+.+.+++|.... .|-.+.+..... ..+
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 88 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGK 88 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 5789999997 4899999999888999999888764 344444443553222 233333222221 356
Q ss_pred cCEEEEcCCCc-----------------------------ccHHHHHHHhccCCEEEEeCCCC
Q 018158 249 LDFILDTVSAK-----------------------------HSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 249 ~d~vid~~g~~-----------------------------~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+|+++++.|.. ...+.++..++.+|+++.++...
T Consensus 89 iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~ 151 (272)
T PRK08159 89 LDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYG 151 (272)
T ss_pred CcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence 99999998731 01233455566778998886543
|
|
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.011 Score=53.06 Aligned_cols=96 Identities=16% Similarity=0.112 Sum_probs=72.3
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHHcCCCeEeeCcc
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIS-TSPSKEKEAKELLGADEFILSTN 238 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~-~~~~~~~~~~~~~g~~~~v~~~~ 238 (360)
..+||+..+.+..|+...--- .|++|+|+|- +.+|.-.+.++...|++|++.. ++.+ +
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~~--~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~-l----------------- 195 (296)
T PRK14188 136 ALVPCTPLGCMMLLRRVHGDL--SGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD-L----------------- 195 (296)
T ss_pred CCcCCCHHHHHHHHHHhCCCC--CCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC-H-----------------
Confidence 456777777777777665322 7999999996 9999999999999999999995 4321 1
Q ss_pred HHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 239 AMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 239 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.+..+..|+|+-++|....+... ++++|..++++|...
T Consensus 196 ----~e~~~~ADIVIsavg~~~~v~~~--~lk~GavVIDvGin~ 233 (296)
T PRK14188 196 ----PAVCRRADILVAAVGRPEMVKGD--WIKPGATVIDVGINR 233 (296)
T ss_pred ----HHHHhcCCEEEEecCChhhcchh--eecCCCEEEEcCCcc
Confidence 12235689999999987655554 489999999998754
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.015 Score=51.92 Aligned_cols=75 Identities=19% Similarity=0.214 Sum_probs=54.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe---EeeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE---FILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~d~v 252 (360)
.++++||+|+ |++|..+++.+...|++|+++++++++.+.+.+..+... ..|..+.+..... -.++|++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4678999999 999999999988899999999999988777666333211 1244443332221 2468999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
+++.|.
T Consensus 83 v~~ag~ 88 (277)
T PRK06180 83 VNNAGY 88 (277)
T ss_pred EECCCc
Confidence 999885
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0076 Score=46.86 Aligned_cols=82 Identities=24% Similarity=0.377 Sum_probs=53.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVIS-TSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~-~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
+.-+|-|+|+|-+|..+..+++..|.+|..+. ++.+..+++...++...+.+.. +.....|++|-++.+. .+
T Consensus 9 ~~l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~------~~~~~aDlv~iavpDd-aI 81 (127)
T PF10727_consen 9 ARLKIGIIGAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLE------EILRDADLVFIAVPDD-AI 81 (127)
T ss_dssp ---EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TT------GGGCC-SEEEE-S-CC-HH
T ss_pred CccEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccc------cccccCCEEEEEechH-HH
Confidence 44578999999999999999999999988775 5555667776656654444332 2346799999999987 46
Q ss_pred HHHHHHhccC
Q 018158 263 GPILELLKVN 272 (360)
Q Consensus 263 ~~~~~~l~~~ 272 (360)
..+.+.|...
T Consensus 82 ~~va~~La~~ 91 (127)
T PF10727_consen 82 AEVAEQLAQY 91 (127)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHHHh
Confidence 8777877755
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.013 Score=53.56 Aligned_cols=74 Identities=24% Similarity=0.247 Sum_probs=53.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC---C-eE--eeCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA---D-EF--ILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~---~-~~--v~~~~~~~~~~-------~~~~~ 249 (360)
.+++++|+|+ |++|..+++.+...|++|++++++.++.+.+.+.+.. . .. .|-.+.+.... ...++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 5788999999 9999999998888899999999998877666554421 1 11 24333332221 13469
Q ss_pred CEEEEcCC
Q 018158 250 DFILDTVS 257 (360)
Q Consensus 250 d~vid~~g 257 (360)
|++|+++|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999987
|
|
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.016 Score=51.48 Aligned_cols=97 Identities=13% Similarity=0.102 Sum_probs=73.1
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+..+.+..|+..+--- .|++++|+|. ..+|.-++.++...|++|++.......+.
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l--~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~----------------- 195 (285)
T PRK14191 135 GFVPATPMGVMRLLKHYHIEI--KGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLS----------------- 195 (285)
T ss_pred CCCCCcHHHHHHHHHHhCCCC--CCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHH-----------------
Confidence 456788777777777665322 6999999999 59999999999999999998864432221
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+.-+.+|+++-++|....+. -+++++|..++++|...
T Consensus 196 ----~~~~~ADIvV~AvG~p~~i~--~~~vk~GavVIDvGi~~ 232 (285)
T PRK14191 196 ----FYTQNADIVCVGVGKPDLIK--ASMVKKGAVVVDIGINR 232 (285)
T ss_pred ----HHHHhCCEEEEecCCCCcCC--HHHcCCCcEEEEeeccc
Confidence 12356899999999876433 36789999999999743
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.011 Score=53.96 Aligned_cols=75 Identities=19% Similarity=0.222 Sum_probs=52.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc----C-CC-e--EeeCccHHHHHh-------cCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL----G-AD-E--FILSTNAMQMQA-------GKR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g-~~-~--~v~~~~~~~~~~-------~~~ 247 (360)
.+++++|+|+ +++|.++++.+...|++|++++|+.++.+.+.+.+ + .. . ..|-.+.+..+. ...
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 5789999999 99999999888889999999999987765544322 2 11 1 124444433322 145
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|++|+++|.
T Consensus 93 ~iD~li~nAG~ 103 (313)
T PRK05854 93 PIHLLINNAGV 103 (313)
T ss_pred CccEEEECCcc
Confidence 79999998873
|
|
| >PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.027 Score=47.94 Aligned_cols=95 Identities=21% Similarity=0.181 Sum_probs=64.2
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHH---cCCC---eEeeCccHHHHHhcCCCcCEEE
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFG--HHVTVISTSPSKEKEAKEL---LGAD---EFILSTNAMQMQAGKRTLDFIL 253 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G--~~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~~~~~~~~~~~~d~vi 253 (360)
+++++++|-+|+|. |..++.+++..+ .+|+.++.+++-.+.++++ .+.. .++..+-.+... ....+|.|+
T Consensus 70 ~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~-~~~~fD~Ii 147 (205)
T PRK13944 70 PRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLE-KHAPFDAII 147 (205)
T ss_pred CCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCc-cCCCccEEE
Confidence 44889999999864 777777777664 5899999998877666654 3422 222222111111 135799999
Q ss_pred EcCCCcccHHHHHHHhccCCEEEEe
Q 018158 254 DTVSAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 254 d~~g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
-+.......+.+.+.|++||+++..
T Consensus 148 ~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 148 VTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred EccCcchhhHHHHHhcCcCcEEEEE
Confidence 7766555557888999999999764
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.038 Score=48.18 Aligned_cols=72 Identities=14% Similarity=0.008 Sum_probs=48.7
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe--EeeCccHHHHHhc----CCCcCEEEEcCC
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE--FILSTNAMQMQAG----KRTLDFILDTVS 257 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~--~v~~~~~~~~~~~----~~~~d~vid~~g 257 (360)
.+++|+|+ |++|...+..+...|++|+++++++++.+.+........ ..|-.+.+..... ....|.++.+.|
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag 80 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAG 80 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCc
Confidence 56899999 999998888888889999999999888777665222111 1344444333222 334677776665
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.026 Score=52.67 Aligned_cols=91 Identities=18% Similarity=0.211 Sum_probs=66.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc--
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS-- 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~-- 261 (360)
.|++|.|+|.|.+|...++.++.+|++|++.+++....+..+. +|.... .+ ..+.-...|+|+.+......
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~-~g~~~~---~~---l~ell~~aDvV~l~lPlt~~T~ 263 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQE-LGLTYH---VS---FDSLVSVCDVVTIHCPLHPETE 263 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhh-cCceec---CC---HHHHhhcCCEEEEcCCCCHHHH
Confidence 5789999999999999999999999999999987643333334 553211 11 23345678999988874321
Q ss_pred --H-HHHHHHhccCCEEEEeCCC
Q 018158 262 --L-GPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 262 --~-~~~~~~l~~~G~~v~~g~~ 281 (360)
+ ...+..|+++..+++++.-
T Consensus 264 ~li~~~~l~~mk~ga~lIN~aRG 286 (385)
T PRK07574 264 HLFDADVLSRMKRGSYLVNTARG 286 (385)
T ss_pred HHhCHHHHhcCCCCcEEEECCCC
Confidence 1 4678889999999888753
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.012 Score=51.73 Aligned_cols=75 Identities=15% Similarity=0.124 Sum_probs=53.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe---EeeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE---FILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +.+. ..|..+.+..... ..++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999 99999999999999999999999988776665433 3221 1244443332221 3579
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|+++++.|.
T Consensus 88 d~lv~~ag~ 96 (253)
T PRK05867 88 DIAVCNAGI 96 (253)
T ss_pred CEEEECCCC
Confidence 999998873
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.047 Score=48.06 Aligned_cols=75 Identities=16% Similarity=0.211 Sum_probs=52.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |.+|..+++.+...|++|+++++++++.+.+.+. .+.... .|..+.+..... ..++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 9999999999999999999999998766554432 343322 233333322211 2468
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|.+.|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999999874
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.014 Score=51.27 Aligned_cols=75 Identities=20% Similarity=0.250 Sum_probs=52.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |.+|..+++.+...|++|+++++++++.+.+.+.+ |.... .|..+.+..... ..++
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999999 99999999988888999999999987665544433 32111 244443332221 3568
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|++.|.
T Consensus 89 d~li~~ag~ 97 (255)
T PRK07523 89 DILVNNAGM 97 (255)
T ss_pred CEEEECCCC
Confidence 999999974
|
|
| >TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.023 Score=48.79 Aligned_cols=95 Identities=22% Similarity=0.264 Sum_probs=63.7
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHH---cCCCeE--eeCccHHHHHhcCCCcCEEEE
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKEL---LGADEF--ILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~---~g~~~~--v~~~~~~~~~~~~~~~d~vid 254 (360)
++++++||-+|+|. |..++.+++..+. +|+.++.+++..+.++++ +|.+.+ +.. +..........||+|+-
T Consensus 75 ~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~-d~~~~~~~~~~fD~Ii~ 152 (215)
T TIGR00080 75 LKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG-DGTQGWEPLAPYDRIYV 152 (215)
T ss_pred CCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC-CcccCCcccCCCCEEEE
Confidence 44899999998863 6677778887654 699999999877776654 343222 211 11111111357999986
Q ss_pred cCCCcccHHHHHHHhccCCEEEEe
Q 018158 255 TVSAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 255 ~~g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
..........+.+.|+++|+++..
T Consensus 153 ~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 153 TAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred cCCcccccHHHHHhcCcCcEEEEE
Confidence 555555567888999999998764
|
Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt. |
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.013 Score=51.76 Aligned_cols=70 Identities=17% Similarity=0.177 Sum_probs=48.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhc-------CCCcCEEEEc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAG-------KRTLDFILDT 255 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~-------~~~~d~vid~ 255 (360)
.++++||+|+ |++|.+++..+...|++|++++++.++... +- ....|-.+.+..... ..++|++|++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~----~~-~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~ 79 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYND----VD-YFKVDVSNKEQVIKGIDYVISKYGRIDILVNN 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCc----eE-EEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 5789999999 999999999999999999999987653221 10 011233333222221 3469999998
Q ss_pred CCC
Q 018158 256 VSA 258 (360)
Q Consensus 256 ~g~ 258 (360)
.|.
T Consensus 80 Ag~ 82 (258)
T PRK06398 80 AGI 82 (258)
T ss_pred CCC
Confidence 873
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.014 Score=51.42 Aligned_cols=75 Identities=20% Similarity=0.267 Sum_probs=53.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC-eE--eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD-EF--ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~~--v~~~~~~~~~~~-------~~~~ 249 (360)
.+++++|+|+ |.+|..++..+...|++|++++++.++++.+.+.+ +.. .+ .|..+.+..... ..++
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTI 87 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 5799999999 99999999999989999999999988876655432 211 12 233333222221 3478
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|++.|.
T Consensus 88 d~li~~ag~ 96 (258)
T PRK06949 88 DILVNNSGV 96 (258)
T ss_pred CEEEECCCC
Confidence 999999983
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.019 Score=50.29 Aligned_cols=75 Identities=23% Similarity=0.245 Sum_probs=52.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCe---EeeCccHHHHHh----c---CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADE---FILSTNAMQMQA----G---KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~----~---~~~~ 249 (360)
++++++|+|+ |++|..+++.+...|++|++++++.++.+.+... .+... ..|-.+.+.... . ..++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 9999999999998999999999988766554332 24321 223333322211 1 2568
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|++.|.
T Consensus 84 d~vi~~ag~ 92 (253)
T PRK08217 84 NGLINNAGI 92 (253)
T ss_pred CEEEECCCc
Confidence 999999873
|
|
| >TIGR02992 ectoine_eutC ectoine utilization protein EutC | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.015 Score=53.26 Aligned_cols=94 Identities=16% Similarity=0.196 Sum_probs=65.1
Q ss_pred CCcEEEEEcCChHHHHHHHHHH-HcCC-eEEEEeCChhHHHHHHHHc----CCCeEeeCccHHHHHhcCCCcCEEEEcCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGK-AFGH-HVTVISTSPSKEKEAKELL----GADEFILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~-~~G~-~V~~~~~~~~~~~~~~~~~----g~~~~v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
..++++|+|+|..+.+.+..+. ..+. +|++..|+.++.+.+.+++ |.+ +....+ ..+.-.+.|+|+.|++
T Consensus 128 ~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~~~---~~~av~~aDiVvtaT~ 203 (326)
T TIGR02992 128 DSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAATD---PRAAMSGADIIVTTTP 203 (326)
T ss_pred CCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEeCC---HHHHhccCCEEEEecC
Confidence 5678999999999988777776 4676 6999999999877766544 322 222222 2233468999999998
Q ss_pred CcccHHHHHHHhccCCEEEEeCCCC
Q 018158 258 AKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 258 ~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
....+- -.++++++-++..+|...
T Consensus 204 s~~p~i-~~~~l~~g~~i~~vg~~~ 227 (326)
T TIGR02992 204 SETPIL-HAEWLEPGQHVTAMGSDA 227 (326)
T ss_pred CCCcEe-cHHHcCCCcEEEeeCCCC
Confidence 754321 125788888888888653
|
Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423). |
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.046 Score=48.19 Aligned_cols=75 Identities=21% Similarity=0.225 Sum_probs=49.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHH--HcCCCe---EeeCccHHHHHhc-------CCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKE--LLGADE---FILSTNAMQMQAG-------KRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~--~~g~~~---~v~~~~~~~~~~~-------~~~~d 250 (360)
.++++||+|+ |++|.++++.+...|++|+++++++...+...+ ..+.+. ..|..+.+..... ..++|
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence 5789999999 999999999998899999999987543222222 024321 1344443222111 35799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++++++|.
T Consensus 87 ~lv~nAg~ 94 (260)
T PRK12823 87 VLINNVGG 94 (260)
T ss_pred EEEECCcc
Confidence 99999873
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.022 Score=41.80 Aligned_cols=86 Identities=26% Similarity=0.358 Sum_probs=58.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcC---CeEEEE-eCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFG---HHVTVI-STSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G---~~V~~~-~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
++.|+|+|.+|.+.+.-+...| .+|+++ .+++++.+.++++++...... +..+ .-+..|++|-|+.... +
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~-~~~~----~~~~advvilav~p~~-~ 74 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD-DNEE----AAQEADVVILAVKPQQ-L 74 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE-EHHH----HHHHTSEEEE-S-GGG-H
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC-ChHH----hhccCCEEEEEECHHH-H
Confidence 4678899999999999999999 788855 999999999888787543321 1111 2236899999997653 3
Q ss_pred HHHHHH---hccCCEEEEe
Q 018158 263 GPILEL---LKVNGTLSVV 278 (360)
Q Consensus 263 ~~~~~~---l~~~G~~v~~ 278 (360)
..+++. ..++..++++
T Consensus 75 ~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 75 PEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp HHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHhhccCCCEEEEe
Confidence 444443 4456666665
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.015 Score=51.02 Aligned_cols=72 Identities=18% Similarity=0.171 Sum_probs=53.5
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHH----hc----CCCcCEEEEc
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQ----AG----KRTLDFILDT 255 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~----~~----~~~~d~vid~ 255 (360)
++++|+|+ |++|..+++.+...|++|++++++.++.+.+++ .+.+.+ .|..+.+... .. ...+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS-LGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh-CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 57999999 999999999999999999999999988887776 675433 2333332221 11 3568999988
Q ss_pred CCC
Q 018158 256 VSA 258 (360)
Q Consensus 256 ~g~ 258 (360)
.|.
T Consensus 82 ag~ 84 (256)
T PRK08017 82 AGF 84 (256)
T ss_pred CCC
Confidence 774
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.015 Score=51.23 Aligned_cols=74 Identities=20% Similarity=0.206 Sum_probs=52.5
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCC---eEeeCccHHHHHhc-CCCcCEEEEcC
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGAD---EFILSTNAMQMQAG-KRTLDFILDTV 256 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~~~~~~~~-~~~~d~vid~~ 256 (360)
++++||+|+ |.+|..+++.+...|++|++++++.++...+.+. .+.. ...|..+....... ..++|++|++.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 467999999 9999999999999999999999987765554432 2322 11244444343333 45899999998
Q ss_pred CC
Q 018158 257 SA 258 (360)
Q Consensus 257 g~ 258 (360)
|.
T Consensus 82 g~ 83 (257)
T PRK09291 82 GI 83 (257)
T ss_pred Cc
Confidence 73
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.017 Score=51.74 Aligned_cols=75 Identities=21% Similarity=0.300 Sum_probs=52.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++++.+.+.+ +.... .|..+.+..... ..++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999999 99999999988889999999999877665554333 32211 233333333221 3468
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|++.|.
T Consensus 85 d~vi~~Ag~ 93 (287)
T PRK06194 85 HLLFNNAGV 93 (287)
T ss_pred CEEEECCCC
Confidence 999999985
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.016 Score=47.39 Aligned_cols=91 Identities=26% Similarity=0.353 Sum_probs=62.7
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC--CCeEeeCccHHHHHhcCCCcCEEEEcCCCcc---
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG--ADEFILSTNAMQMQAGKRTLDFILDTVSAKH--- 260 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g--~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~--- 260 (360)
+|.|+|+ |-+|...++=|+.+|.+|++++|++++....+. .- -..+++ .+.....-.++|+||++.|...
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~-~~i~q~Difd---~~~~a~~l~g~DaVIsA~~~~~~~~ 77 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQG-VTILQKDIFD---LTSLASDLAGHDAVISAFGAGASDN 77 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccccc-ceeecccccC---hhhhHhhhcCCceEEEeccCCCCCh
Confidence 4778899 999999999999999999999999987654322 11 012222 2222334679999999998551
Q ss_pred ------cHHHHHHHhccCC--EEEEeCCC
Q 018158 261 ------SLGPILELLKVNG--TLSVVGAP 281 (360)
Q Consensus 261 ------~~~~~~~~l~~~G--~~v~~g~~ 281 (360)
..+.++..++..| |+..+|.-
T Consensus 78 ~~~~~k~~~~li~~l~~agv~RllVVGGA 106 (211)
T COG2910 78 DELHSKSIEALIEALKGAGVPRLLVVGGA 106 (211)
T ss_pred hHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence 1234667777643 77777753
|
|
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.025 Score=52.85 Aligned_cols=95 Identities=19% Similarity=0.332 Sum_probs=69.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS- 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~- 261 (360)
.++++||+|+|-+|..++..+...|. +|++..|+.++...+.+++|+..+ ...+ ....-..+|+||.+++.+..
T Consensus 177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l~e---l~~~l~~~DvVissTsa~~~i 252 (414)
T COG0373 177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-ALEE---LLEALAEADVVISSTSAPHPI 252 (414)
T ss_pred ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cHHH---HHHhhhhCCEEEEecCCCccc
Confidence 68899999999999999999999997 699999999998888887995433 2222 22334679999999987643
Q ss_pred --HHHHHHHhccCC--EEEEeCCCC
Q 018158 262 --LGPILELLKVNG--TLSVVGAPE 282 (360)
Q Consensus 262 --~~~~~~~l~~~G--~~v~~g~~~ 282 (360)
.....+.++.-- -+++++.+.
T Consensus 253 i~~~~ve~a~~~r~~~livDiavPR 277 (414)
T COG0373 253 ITREMVERALKIRKRLLIVDIAVPR 277 (414)
T ss_pred cCHHHHHHHHhcccCeEEEEecCCC
Confidence 234445554332 356777654
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.054 Score=47.83 Aligned_cols=99 Identities=9% Similarity=0.063 Sum_probs=63.2
Q ss_pred CCcEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCCh---hHHHHHHHHcC-CC---eEeeCccHHHHHhc-------C
Q 018158 184 AKKRIGIVGL---GGLGHVAVKFGKAFGHHVTVISTSP---SKEKEAKELLG-AD---EFILSTNAMQMQAG-------K 246 (360)
Q Consensus 184 ~~~~vlI~Ga---g~vG~~aiqla~~~G~~V~~~~~~~---~~~~~~~~~~g-~~---~~v~~~~~~~~~~~-------~ 246 (360)
.+++++|+|+ +++|.++++.+...|++|++++++. ++++.+.+.+. .. ...|-.+.+..... -
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 5789999997 4999999888888999999987643 44454544342 21 11244443322211 3
Q ss_pred CCcCEEEEcCCCcc-----------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 247 RTLDFILDTVSAKH-----------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 247 ~~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.++|+++++.|... ..+.++..|+++|+++.++...
T Consensus 86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~ 150 (257)
T PRK08594 86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLG 150 (257)
T ss_pred CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccC
Confidence 57999999886310 0123455566779999887654
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.056 Score=46.91 Aligned_cols=75 Identities=15% Similarity=0.168 Sum_probs=51.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
+++++||+|+ |.+|..+++.+...|.+|+++++++++.+.+... .+.... .|..+....... ...+
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999999 9999999998888899999999998775544332 232222 233333222111 2468
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|.++.+.|.
T Consensus 84 d~vi~~ag~ 92 (246)
T PRK05653 84 DILVNNAGI 92 (246)
T ss_pred CEEEECCCc
Confidence 999999874
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.021 Score=50.24 Aligned_cols=75 Identities=15% Similarity=0.159 Sum_probs=52.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe---EeeCccHHHHH----hc---CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE---FILSTNAMQMQ----AG---KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~----~~---~~~~d~v 252 (360)
.|++++|+|+ |.+|..++..+...|++|++++++.++...+.+.++... ..|-.+.+... .. -.++|++
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 88 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL 88 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5789999999 999999999888899999999988776665544355321 12333332221 11 2468999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|.+.|.
T Consensus 89 i~~ag~ 94 (255)
T PRK05717 89 VCNAAI 94 (255)
T ss_pred EECCCc
Confidence 998874
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.034 Score=48.87 Aligned_cols=74 Identities=14% Similarity=0.127 Sum_probs=50.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhH--HHHHHHHcCCCe---EeeCccHHHHHhc-------CCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSK--EKEAKELLGADE---FILSTNAMQMQAG-------KRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~--~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~d 250 (360)
.++++||+|+ +++|.++++.+...|++|++++++... .+.+++ .+.+. ..|-.+.+..... ..++|
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEA-LGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHH-cCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999999 999999999999999999998876432 122233 45321 1344444333221 35799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
+++++.|.
T Consensus 86 ~lv~~ag~ 93 (251)
T PRK12481 86 ILINNAGI 93 (251)
T ss_pred EEEECCCc
Confidence 99999873
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.015 Score=51.05 Aligned_cols=75 Identities=19% Similarity=0.156 Sum_probs=53.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.+++++|+|+ |++|..++..+...|++|+++++++++.+.+.+++ +.+.. .|-.+.+..... ..++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4689999999 99999999988889999999999988776655433 32221 233333222211 3479
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|+++|.
T Consensus 85 d~li~~ag~ 93 (254)
T PRK07478 85 DIAFNNAGT 93 (254)
T ss_pred CEEEECCCC
Confidence 999999874
|
|
| >PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.017 Score=51.33 Aligned_cols=97 Identities=15% Similarity=0.144 Sum_probs=74.1
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+....+..++..+--- .|++++|+|. ..+|.-++.++...|++|++.......+
T Consensus 142 ~~~PcTp~av~~ll~~~~i~l--~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l------------------ 201 (287)
T PRK14176 142 GLVPCTPHGVIRALEEYGVDI--EGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDL------------------ 201 (287)
T ss_pred CCCCCcHHHHHHHHHHcCCCC--CCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCH------------------
Confidence 456787777777787765322 7999999999 6699999999999999999988543221
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
....+.+|+++.++|.+..+. -++++++..++++|...
T Consensus 202 ---~~~~~~ADIvv~AvG~p~~i~--~~~vk~gavVIDvGin~ 239 (287)
T PRK14176 202 ---KKYTLDADILVVATGVKHLIK--ADMVKEGAVIFDVGITK 239 (287)
T ss_pred ---HHHHhhCCEEEEccCCccccC--HHHcCCCcEEEEecccc
Confidence 112357899999999876542 36899999999999753
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.02 Score=50.37 Aligned_cols=74 Identities=18% Similarity=0.262 Sum_probs=51.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe----EeeCccHHHHHhc-------CCCcCE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE----FILSTNAMQMQAG-------KRTLDF 251 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~----~v~~~~~~~~~~~-------~~~~d~ 251 (360)
.++++||+|+ |.+|..+++.+...|++|++++++.+......+ ..... ..|-.+.+..... ..++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQ-LLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 5789999999 999999998888899999999998775544444 32211 1233333222211 347899
Q ss_pred EEEcCCC
Q 018158 252 ILDTVSA 258 (360)
Q Consensus 252 vid~~g~ 258 (360)
+|.+.|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9999974
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.04 Score=49.23 Aligned_cols=96 Identities=17% Similarity=0.216 Sum_probs=61.2
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe-E--eeCccHHHHHhc------CCCcCEE
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE-F--ILSTNAMQMQAG------KRTLDFI 252 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~-~--v~~~~~~~~~~~------~~~~d~v 252 (360)
+++++|.|+|++|..++..+. .|++|++++++.++++.+.+.+ |.+. . .|-.+.+..... ..++|++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l 80 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL 80 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence 367889999999999888875 7999999999887665554323 3221 1 244343222111 2569999
Q ss_pred EEcCCCcc------------------cHHHHHHHhccCCEEEEeCCC
Q 018158 253 LDTVSAKH------------------SLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 253 id~~g~~~------------------~~~~~~~~l~~~G~~v~~g~~ 281 (360)
|++.|... .++.+...++.+|+++.++..
T Consensus 81 i~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~ 127 (275)
T PRK06940 81 VHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQ 127 (275)
T ss_pred EECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEec
Confidence 99998431 123444556666777776544
|
|
| >cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.025 Score=48.89 Aligned_cols=101 Identities=14% Similarity=0.167 Sum_probs=63.0
Q ss_pred hchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe---EEEEeCC----hhHH--------HHHHHHcCCCeEee
Q 018158 171 FCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH---VTVISTS----PSKE--------KEAKELLGADEFIL 235 (360)
Q Consensus 171 ~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~---V~~~~~~----~~~~--------~~~~~~~g~~~~v~ 235 (360)
+.+++..+.-- .+.+++|+|+|+.|..++..+...|++ +++++++ .++. ..++. ++... .+
T Consensus 13 ~~al~~~g~~l--~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~-~~~~~-~~ 88 (226)
T cd05311 13 LNALKLVGKKI--EEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKE-TNPEK-TG 88 (226)
T ss_pred HHHHHHhCCCc--cCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHH-hccCc-cc
Confidence 34454443222 578999999999999999988888984 9999988 3432 22333 43221 11
Q ss_pred CccHHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeC
Q 018158 236 STNAMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 236 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 279 (360)
.+ ..+.-+++|++|++++....-...++.|.+...+..+.
T Consensus 89 -~~---l~~~l~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 89 -GT---LKEALKGADVFIGVSRPGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred -CC---HHHHHhcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence 11 11222459999999974322246777787776555443
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph |
| >COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.076 Score=45.21 Aligned_cols=118 Identities=15% Similarity=0.048 Sum_probs=76.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP-SKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~-~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
.|+.|||+|+|.+|.-=+.++...|++|+++..+. +++..+....+.+ .+. ... ....-.++++||-++++...-
T Consensus 11 ~~k~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~-~~~-~~~--~~~~~~~~~lviaAt~d~~ln 86 (210)
T COG1648 11 EGKKVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIK-WIE-REF--DAEDLDDAFLVIAATDDEELN 86 (210)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcc-hhh-ccc--ChhhhcCceEEEEeCCCHHHH
Confidence 68899999999999999999999999999999776 4455554422211 111 111 111123499999999988766
Q ss_pred HHHHHHhccCCEEEEeCCCCCCcccChhh-HhccCcEEEEeecC
Q 018158 263 GPILELLKVNGTLSVVGAPEAPFELPSFP-LIFGKRSVKGSMTG 305 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~~ 305 (360)
..+....++.+.++.+.......++-... +-...+.+.-+..+
T Consensus 87 ~~i~~~a~~~~i~vNv~D~p~~~~f~~Pa~~~r~~l~iaIsT~G 130 (210)
T COG1648 87 ERIAKAARERRILVNVVDDPELCDFIFPAIVDRGPLQIAISTGG 130 (210)
T ss_pred HHHHHHHHHhCCceeccCCcccCceecceeeccCCeEEEEECCC
Confidence 78888888888888886554332322222 23334555444444
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.016 Score=50.94 Aligned_cols=74 Identities=20% Similarity=0.197 Sum_probs=51.8
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC-eEe--eCccHHHHHhc-------CCCcC
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD-EFI--LSTNAMQMQAG-------KRTLD 250 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~~v--~~~~~~~~~~~-------~~~~d 250 (360)
+++++|+|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +.. ..+ |-.+.+..... ..++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 478999999 99999999999999999999999987766654433 221 122 33333222221 35789
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|++.|.
T Consensus 81 ~lI~~ag~ 88 (252)
T PRK07677 81 ALINNAAG 88 (252)
T ss_pred EEEECCCC
Confidence 99999873
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.015 Score=50.20 Aligned_cols=72 Identities=17% Similarity=0.195 Sum_probs=50.7
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe--EeeCccHHHHHhc-----CCCcCEEEEcCC
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE--FILSTNAMQMQAG-----KRTLDFILDTVS 257 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~--~v~~~~~~~~~~~-----~~~~d~vid~~g 257 (360)
++++|+|+ |++|...+..+...|++|+++++++++.+.+.+ ++... ..|-.+.+..... ..++|++|.+.|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-ccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 46899999 999999888888889999999999877666655 43221 2333333322221 347999999886
Q ss_pred C
Q 018158 258 A 258 (360)
Q Consensus 258 ~ 258 (360)
.
T Consensus 81 ~ 81 (225)
T PRK08177 81 I 81 (225)
T ss_pred c
Confidence 4
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.035 Score=50.28 Aligned_cols=99 Identities=11% Similarity=0.102 Sum_probs=62.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChh--HHHHHHH---HcCCCeE---eeCccHHHHHh-------cCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPS--KEKEAKE---LLGADEF---ILSTNAMQMQA-------GKR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~--~~~~~~~---~~g~~~~---v~~~~~~~~~~-------~~~ 247 (360)
.++++||+|+ |++|..++..+...|++|+++.++.+ +.+.+.+ ..|.... .|-.+.+.... ...
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 5789999999 99999999988889999988876532 2222211 1443222 23333322221 135
Q ss_pred CcCEEEEcCCCcc--------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 248 TLDFILDTVSAKH--------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 248 ~~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
++|++|++.|... ..+.++..|+.+|+++.++...
T Consensus 134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~ 194 (300)
T PRK06128 134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQ 194 (300)
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcc
Confidence 7999999987320 1234445566778999887644
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.02 Score=53.96 Aligned_cols=75 Identities=13% Similarity=0.124 Sum_probs=52.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC--CC-eEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG--AD-EFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g--~~-~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
.+++++|+|+ |++|.+.++.+...|++|+++++++++........+ .. ...|..+.+...+.-+++|++|++.|.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi 255 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGI 255 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCc
Confidence 5789999999 999999999888899999999988776543322111 11 113444554444445689999998874
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.019 Score=50.58 Aligned_cols=75 Identities=12% Similarity=0.158 Sum_probs=53.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc-----CCCe---EeeCccHHHH-------HhcCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL-----GADE---FILSTNAMQM-------QAGKR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~-----g~~~---~v~~~~~~~~-------~~~~~ 247 (360)
.+++++|+|+ |++|..+++.+...|++|++++++.++.+.+.+++ +.+. ..|..+.+.. ...-.
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5789999999 99999999999999999999999988766655433 2211 1233333222 11135
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|+++.+.|.
T Consensus 88 ~id~li~~ag~ 98 (257)
T PRK09242 88 GLHILVNNAGG 98 (257)
T ss_pred CCCEEEECCCC
Confidence 79999999984
|
|
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.03 Score=51.53 Aligned_cols=89 Identities=28% Similarity=0.379 Sum_probs=65.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc---
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH--- 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~--- 260 (360)
.|+++.|+|.|.+|...++.++..|++|++.+++.... .... +|.. ..+ ..+.-...|+|+.++....
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~-~~~~----~~~---l~ell~~aDiV~l~lP~t~~T~ 219 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPE-AEKE-LGAE----YRP---LEELLRESDFVSLHVPLTKETY 219 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChh-hHHH-cCCE----ecC---HHHHHhhCCEEEEeCCCChHHh
Confidence 68999999999999999999999999999999876432 2223 4432 111 2233457899999887432
Q ss_pred --cHHHHHHHhccCCEEEEeCCC
Q 018158 261 --SLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 261 --~~~~~~~~l~~~G~~v~~g~~ 281 (360)
.-...+..|+++..+++++.-
T Consensus 220 ~~i~~~~~~~mk~ga~lIN~aRg 242 (333)
T PRK13243 220 HMINEERLKLMKPTAILVNTARG 242 (333)
T ss_pred hccCHHHHhcCCCCeEEEECcCc
Confidence 125778899999999888653
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.027 Score=49.65 Aligned_cols=74 Identities=12% Similarity=0.140 Sum_probs=51.8
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-eE----eeCccHHHHHhc-------CCCcCE
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-EF----ILSTNAMQMQAG-------KRTLDF 251 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~----v~~~~~~~~~~~-------~~~~d~ 251 (360)
+++++|+|+ |++|..+++.+...|++|++++++.++.+.+.+.+... .+ .|-.+.+..... ...+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 468999999 99999999888888999999999988877665534321 11 233333222111 245899
Q ss_pred EEEcCCC
Q 018158 252 ILDTVSA 258 (360)
Q Consensus 252 vid~~g~ 258 (360)
++++.|.
T Consensus 82 lv~~ag~ 88 (257)
T PRK07024 82 VIANAGI 88 (257)
T ss_pred EEECCCc
Confidence 9998873
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.017 Score=51.55 Aligned_cols=75 Identities=15% Similarity=0.100 Sum_probs=52.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe---EeeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE---FILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|.+++..+...|++|++++++.++++.+.+.+ |... ..|-.+.+..... ..++
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 99999999998889999999999887766554323 3221 1233333332221 3468
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|++.|.
T Consensus 85 d~li~nAg~ 93 (275)
T PRK05876 85 DVVFSNAGI 93 (275)
T ss_pred CEEEECCCc
Confidence 999999873
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.017 Score=50.88 Aligned_cols=75 Identities=16% Similarity=0.153 Sum_probs=53.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC---eEeeCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD---EFILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~-------~~~~~ 249 (360)
.+++++|+|+ |++|..+++.+...|++|+++++++++.+.+.+.+ +.. ...|..+.+.... .-.++
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV 83 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence 6789999999 99999999988899999999999887766655433 221 1223333322211 12468
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|.+.|.
T Consensus 84 d~vi~~ag~ 92 (258)
T PRK07890 84 DALVNNAFR 92 (258)
T ss_pred cEEEECCcc
Confidence 999998874
|
|
| >PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.023 Score=50.26 Aligned_cols=96 Identities=18% Similarity=0.207 Sum_probs=72.9
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+....+..++..+--- .|++++|+|- ..+|.-++.++...|++|++..+....+..
T Consensus 130 ~~~PcTp~av~~ll~~~~i~l--~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~---------------- 191 (279)
T PRK14178 130 GFAPCTPNGIMTLLHEYKISI--AGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKA---------------- 191 (279)
T ss_pred CCCCCCHHHHHHHHHHcCCCC--CCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHH----------------
Confidence 356777777777777765333 7999999999 699999999999999999998866532221
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
.-+.+|+++.++|....+.. +++++|..++++|..
T Consensus 192 -----~~~~ADIvI~Avgk~~lv~~--~~vk~GavVIDVgi~ 226 (279)
T PRK14178 192 -----ELRQADILVSAAGKAGFITP--DMVKPGATVIDVGIN 226 (279)
T ss_pred -----HHhhCCEEEECCCcccccCH--HHcCCCcEEEEeecc
Confidence 23468999999986644332 457999999999875
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.061 Score=47.50 Aligned_cols=99 Identities=14% Similarity=0.142 Sum_probs=61.9
Q ss_pred CCcEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCCh------hHHHHHHHHcCCCeE--eeCccHHHHHhc-------
Q 018158 184 AKKRIGIVGL---GGLGHVAVKFGKAFGHHVTVISTSP------SKEKEAKELLGADEF--ILSTNAMQMQAG------- 245 (360)
Q Consensus 184 ~~~~vlI~Ga---g~vG~~aiqla~~~G~~V~~~~~~~------~~~~~~~~~~g~~~~--v~~~~~~~~~~~------- 245 (360)
.+++++|+|+ +++|.++++.+...|++|+++.++. +..+.+.+..+.... .|-.+.+.....
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 5789999996 4899999988888999998876432 223333331221111 244443333211
Q ss_pred CCCcCEEEEcCCCcc-----------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 246 KRTLDFILDTVSAKH-----------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 246 ~~~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
..++|+++++.|... ..+.++..|+++|+++.++...
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~ 150 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLG 150 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence 357999999987320 1244566677789998887643
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.023 Score=48.98 Aligned_cols=71 Identities=20% Similarity=0.224 Sum_probs=51.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHh----cCCCcCEEEEcCC
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQA----GKRTLDFILDTVS 257 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~----~~~~~d~vid~~g 257 (360)
+++|+|+ |++|..+++.+...|++|++++++.++.+.+.+.++...+ .|..+.+.... ...++|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence 4899999 9999999999988999999999998887766554554322 34444433322 2346899999865
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.081 Score=46.89 Aligned_cols=74 Identities=15% Similarity=0.149 Sum_probs=47.8
Q ss_pred CCcEEEEEcC-C--hHHHHHHHHHHHcCCeEEEEeCChh---HHHHHHHHcCCCeE--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-G--GLGHVAVKFGKAFGHHVTVISTSPS---KEKEAKELLGADEF--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g--~vG~~aiqla~~~G~~V~~~~~~~~---~~~~~~~~~g~~~~--v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ + ++|.++++.+-..|++|+++++++. ..+.+....+.... .|-.+.+..... ..+
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 5789999998 4 7999988888889999998887632 22333321232111 244443333221 346
Q ss_pred cCEEEEcCC
Q 018158 249 LDFILDTVS 257 (360)
Q Consensus 249 ~d~vid~~g 257 (360)
+|++|++.|
T Consensus 85 iD~linnAg 93 (262)
T PRK07984 85 FDGFVHSIG 93 (262)
T ss_pred CCEEEECCc
Confidence 899999997
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.024 Score=52.98 Aligned_cols=91 Identities=16% Similarity=0.139 Sum_probs=65.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc--
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS-- 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~-- 261 (360)
.|++|.|+|.|.+|...++.++.+|++|++.+++....+...+ .|...+ .+ ..+.-...|+|+.+......
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~-~g~~~~---~~---l~ell~~sDvV~l~lPlt~~T~ 270 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKE-TGAKFE---ED---LDAMLPKCDVVVINTPLTEKTR 270 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhh-cCceec---CC---HHHHHhhCCEEEEeCCCCHHHH
Confidence 6889999999999999999999999999999887544344344 554321 11 22334568999988874211
Q ss_pred ---HHHHHHHhccCCEEEEeCCC
Q 018158 262 ---LGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 262 ---~~~~~~~l~~~G~~v~~g~~ 281 (360)
-...+..|+++..+++++.-
T Consensus 271 ~li~~~~l~~mk~ga~lIN~aRG 293 (386)
T PLN03139 271 GMFNKERIAKMKKGVLIVNNARG 293 (386)
T ss_pred HHhCHHHHhhCCCCeEEEECCCC
Confidence 24678899999999888753
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.02 Score=49.61 Aligned_cols=75 Identities=20% Similarity=0.176 Sum_probs=50.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE-eeCccHHHHHh-------cCCCcCE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF-ILSTNAMQMQA-------GKRTLDF 251 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~-v~~~~~~~~~~-------~~~~~d~ 251 (360)
+++++||+|+ |.+|..+++.+...|++|++++++.++.....+. .+...+ .|..+.+.... ...++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 5789999999 9999999998888899999999977654332221 232211 23333322211 1347999
Q ss_pred EEEcCCC
Q 018158 252 ILDTVSA 258 (360)
Q Consensus 252 vid~~g~ 258 (360)
++.+.|.
T Consensus 86 vi~~ag~ 92 (239)
T PRK12828 86 LVNIAGA 92 (239)
T ss_pred EEECCcc
Confidence 9998874
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.029 Score=48.59 Aligned_cols=74 Identities=15% Similarity=0.149 Sum_probs=52.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHhc--------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG--------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~--------~~~ 248 (360)
.+++++|+|+ +++|.+.+..+...|++|+++.++.++++.+.+. .+.+.. .|-.+.+..... +.+
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999 9999998888888999999999998877655432 343211 233333333211 337
Q ss_pred cCEEEEcCC
Q 018158 249 LDFILDTVS 257 (360)
Q Consensus 249 ~d~vid~~g 257 (360)
+|++|++.|
T Consensus 84 iD~li~nag 92 (227)
T PRK08862 84 PDVLVNNWT 92 (227)
T ss_pred CCEEEECCc
Confidence 999999986
|
|
| >COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.028 Score=48.10 Aligned_cols=91 Identities=25% Similarity=0.274 Sum_probs=61.8
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeEeeCccH--HHHHhcCCCcCEEEEc---
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEFILSTNA--MQMQAGKRTLDFILDT--- 255 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~v~~~~~--~~~~~~~~~~d~vid~--- 255 (360)
+|.+||=+|+|+ |+++.-+|+ +|++|++++.+++..+.++.+ -|.. ++|... +.....+..||+|+.-
T Consensus 59 ~g~~vLDvGCGg-G~Lse~mAr-~Ga~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~~~~edl~~~~~~FDvV~cmEVl 134 (243)
T COG2227 59 PGLRVLDVGCGG-GILSEPLAR-LGASVTGIDASEKPIEVAKLHALESGVN--IDYRQATVEDLASAGGQFDVVTCMEVL 134 (243)
T ss_pred CCCeEEEecCCc-cHhhHHHHH-CCCeeEEecCChHHHHHHHHhhhhcccc--ccchhhhHHHHHhcCCCccEEEEhhHH
Confidence 789999999943 555555554 589999999999988888753 2222 445444 2223335789999852
Q ss_pred --CCCcc-cHHHHHHHhccCCEEEEe
Q 018158 256 --VSAKH-SLGPILELLKVNGTLSVV 278 (360)
Q Consensus 256 --~g~~~-~~~~~~~~l~~~G~~v~~ 278 (360)
+..+. .+..+..+++|+|.+...
T Consensus 135 EHv~dp~~~~~~c~~lvkP~G~lf~S 160 (243)
T COG2227 135 EHVPDPESFLRACAKLVKPGGILFLS 160 (243)
T ss_pred HccCCHHHHHHHHHHHcCCCcEEEEe
Confidence 22322 356788999999988665
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.028 Score=50.21 Aligned_cols=75 Identities=17% Similarity=0.205 Sum_probs=52.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC--C-e--EeeCccHHHHHhc-------CCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA--D-E--FILSTNAMQMQAG-------KRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~--~-~--~v~~~~~~~~~~~-------~~~~d 250 (360)
.++++||+|+ |++|.++++.+...|++|++++++.+..+.+.+.++. . . ..|-.+.+..... ..++|
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id 96 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 4789999999 9999999988888899999999887766555443432 1 1 1244444333221 34799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|++.|.
T Consensus 97 ~li~~Ag~ 104 (280)
T PLN02253 97 IMVNNAGL 104 (280)
T ss_pred EEEECCCc
Confidence 99999874
|
|
| >PRK06141 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.023 Score=51.81 Aligned_cols=95 Identities=24% Similarity=0.221 Sum_probs=64.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHH-cCC-eEEEEeCChhHHHHHHHHcCCC--eEeeCccHHHHHhcCCCcCEEEEcCCCc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKA-FGH-HVTVISTSPSKEKEAKELLGAD--EFILSTNAMQMQAGKRTLDFILDTVSAK 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~-~G~-~V~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~~~~~~~~~~d~vid~~g~~ 259 (360)
..++++|+|+|.+|...+..+.. .+. +|++..|+.++.+.+.+.+... .+....+. .+.-.+.|+|+.+++..
T Consensus 124 ~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~---~~av~~aDIVi~aT~s~ 200 (314)
T PRK06141 124 DASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDL---EAAVRQADIISCATLST 200 (314)
T ss_pred CCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCH---HHHHhcCCEEEEeeCCC
Confidence 56889999999999988764443 564 7999999999887777655321 12211222 22346899999988865
Q ss_pred ccHHHHHHHhccCCEEEEeCCCC
Q 018158 260 HSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 260 ~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
..+-. -+.++++-.+..+|...
T Consensus 201 ~pvl~-~~~l~~g~~i~~ig~~~ 222 (314)
T PRK06141 201 EPLVR-GEWLKPGTHLDLVGNFT 222 (314)
T ss_pred CCEec-HHHcCCCCEEEeeCCCC
Confidence 43211 26788888777777654
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.023 Score=50.01 Aligned_cols=74 Identities=18% Similarity=0.223 Sum_probs=51.7
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHh-------cCCCcC
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQA-------GKRTLD 250 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~-------~~~~~d 250 (360)
++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +.... .|..+.+.... ...++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999 99999999999999999999999887765554433 22211 23333332211 135799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|.+.|.
T Consensus 82 ~vi~~ag~ 89 (256)
T PRK08643 82 VVVNNAGV 89 (256)
T ss_pred EEEECCCC
Confidence 99999874
|
|
| >PRK07340 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.026 Score=51.17 Aligned_cols=101 Identities=14% Similarity=0.078 Sum_probs=70.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHH-cCC-eEEEEeCChhHHHHHHHHcCCC--eEeeCccHHHHHhcCCCcCEEEEcCCCc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKA-FGH-HVTVISTSPSKEKEAKELLGAD--EFILSTNAMQMQAGKRTLDFILDTVSAK 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~-~G~-~V~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~~~~~~~~~~d~vid~~g~~ 259 (360)
..++++|+|+|..|.+.++.+.. .+. +|.+..++.++.+.+.+++... .+. ..+ ..+.-.++|+|+.|++..
T Consensus 124 ~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~~~---~~~av~~aDiVitaT~s~ 199 (304)
T PRK07340 124 PPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-PLD---GEAIPEAVDLVVTATTSR 199 (304)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-ECC---HHHHhhcCCEEEEccCCC
Confidence 56789999999999998888764 566 6999999999887777766421 111 112 222346899999999876
Q ss_pred ccHHHHHHHhccCCEEEEeCCCCC-CcccChh
Q 018158 260 HSLGPILELLKVNGTLSVVGAPEA-PFELPSF 290 (360)
Q Consensus 260 ~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~ 290 (360)
..+-.. .+++|-++..+|.... ...++..
T Consensus 200 ~Pl~~~--~~~~g~hi~~iGs~~p~~~El~~~ 229 (304)
T PRK07340 200 TPVYPE--AARAGRLVVAVGAFTPDMAELAPR 229 (304)
T ss_pred CceeCc--cCCCCCEEEecCCCCCCcccCCHH
Confidence 543333 4799999999997653 3344433
|
|
| >PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.024 Score=50.26 Aligned_cols=97 Identities=16% Similarity=0.148 Sum_probs=74.6
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+....+..++..+.-- .|++++|+|- ..+|.-+..++...|++|++..+....+.
T Consensus 137 ~~~PcTp~avi~ll~~y~i~l--~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~----------------- 197 (284)
T PRK14177 137 TYLPCTPYGMVLLLKEYGIDV--TGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLP----------------- 197 (284)
T ss_pred CCCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH-----------------
Confidence 456777777777777665333 7999999999 99999999999999999998885433222
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+..+..|+++-++|....+. -+++++|..++++|...
T Consensus 198 ----~~~~~ADIvIsAvGk~~~i~--~~~ik~gavVIDvGin~ 234 (284)
T PRK14177 198 ----SIVRQADIIVGAVGKPEFIK--ADWISEGAVLLDAGYNP 234 (284)
T ss_pred ----HHHhhCCEEEEeCCCcCccC--HHHcCCCCEEEEecCcc
Confidence 12357899999999876433 47999999999999754
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.023 Score=50.08 Aligned_cols=75 Identities=21% Similarity=0.284 Sum_probs=52.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc----CCC-eE--eeCccHHHHHhc---CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL----GAD-EF--ILSTNAMQMQAG---KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g~~-~~--v~~~~~~~~~~~---~~~~d~v 252 (360)
.+++++|.|+ +++|..+++.+...|++|++++++.++.+.+.+.+ +.. .. .|-.+.+..... ..++|++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l 85 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL 85 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 4789999999 99999999988889999999999988766544322 321 11 233333332221 3579999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|++.|.
T Consensus 86 v~~ag~ 91 (259)
T PRK06125 86 VNNAGA 91 (259)
T ss_pred EECCCC
Confidence 999873
|
|
| >PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.023 Score=50.36 Aligned_cols=97 Identities=12% Similarity=0.133 Sum_probs=74.7
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+..+.+..|+..+.-- .|++++|+|. ..+|.=++.++...|++|++..+....+. +
T Consensus 136 ~~~PcTp~aii~lL~~y~i~l--~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~---~------------- 197 (282)
T PRK14180 136 CLESCTPKGIMTMLREYGIKT--EGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLK---S------------- 197 (282)
T ss_pred CcCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHH---H-------------
Confidence 457887777777787765433 7999999999 99999999999999999998875432211 1
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
..+..|+++-++|....+. -+++++|..++++|...
T Consensus 198 -----~~k~ADIvIsAvGkp~~i~--~~~vk~gavVIDvGin~ 233 (282)
T PRK14180 198 -----HTTKADILIVAVGKPNFIT--ADMVKEGAVVIDVGINH 233 (282)
T ss_pred -----HhhhcCEEEEccCCcCcCC--HHHcCCCcEEEEecccc
Confidence 2357899999999876544 37899999999999754
|
|
| >PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.019 Score=50.99 Aligned_cols=96 Identities=14% Similarity=0.171 Sum_probs=72.7
Q ss_pred cccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH
Q 018158 162 PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240 (360)
Q Consensus 162 ~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 240 (360)
.+||+..+....|+..+.-- .|++++|+|. +.+|.-.+.++...|++|++.......
T Consensus 137 ~~PcTp~avi~lL~~~~i~l--~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~-------------------- 194 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVEL--EGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRN-------------------- 194 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCC--CCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCC--------------------
Confidence 56777777777777665333 7999999999 999999999999999999987422211
Q ss_pred HHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 241 QMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 241 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
..+..+..|+|+-++|....+... ++++|..++++|...
T Consensus 195 -l~~~~~~ADIVI~avg~~~~v~~~--~ik~GavVIDvgin~ 233 (284)
T PRK14179 195 -LAEVARKADILVVAIGRGHFVTKE--FVKEGAVVIDVGMNR 233 (284)
T ss_pred -HHHHHhhCCEEEEecCccccCCHH--HccCCcEEEEeccee
Confidence 122345799999999988766554 599999999998754
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.024 Score=49.96 Aligned_cols=75 Identities=16% Similarity=0.227 Sum_probs=53.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHh-------cCCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQA-------GKRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~-------~~~~~d~v 252 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.++.... .|-.+.+.... ....+|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4688999999 9999999999998999999999999887776654542211 23333322221 13578999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
+.+.|.
T Consensus 85 i~~ag~ 90 (257)
T PRK07067 85 FNNAAL 90 (257)
T ss_pred EECCCc
Confidence 998873
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.08 Score=47.22 Aligned_cols=75 Identities=16% Similarity=0.182 Sum_probs=51.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCC--C-e--EeeCccHHHHH---h---cCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGA--D-E--FILSTNAMQMQ---A---GKRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~--~-~--~v~~~~~~~~~---~---~~~~ 248 (360)
.++++||+|+ |.+|...+..+...|++|++++++.++.+.+.+. .+. . . ..|..+.+... . ...+
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 81 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR 81 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence 3578999999 9999999998888899999999988766554332 221 1 1 12444433221 1 1357
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|+++.+.|.
T Consensus 82 id~vv~~ag~ 91 (280)
T PRK06914 82 IDLLVNNAGY 91 (280)
T ss_pred eeEEEECCcc
Confidence 8999999874
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.055 Score=47.47 Aligned_cols=99 Identities=14% Similarity=0.149 Sum_probs=61.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHH---cCCCeE---eeCccHHHH-------Hh----
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIS-TSPSKEKEAKEL---LGADEF---ILSTNAMQM-------QA---- 244 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~-~~~~~~~~~~~~---~g~~~~---v~~~~~~~~-------~~---- 244 (360)
.+++++|+|+ |++|.++++.+...|++|+++. ++.++.+.+... .+.... .|-.+.+.. ..
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 5789999999 9999999999999999998875 454444333221 232211 122222111 11
Q ss_pred c-C-CCcCEEEEcCCCcc-------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 245 G-K-RTLDFILDTVSAKH-------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 245 ~-~-~~~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
. + .++|+++++.|... ..+.++..++..|+++.++...
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~ 147 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAA 147 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcc
Confidence 0 1 37999999987320 1234556666778999988654
|
|
| >COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.024 Score=50.57 Aligned_cols=130 Identities=19% Similarity=0.244 Sum_probs=77.2
Q ss_pred cceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHH
Q 018158 145 YRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKE 223 (360)
Q Consensus 145 ~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~ 223 (360)
....+++.+++.+-. .....|++ +++.+... +++|+++|=+|+|. |.++|..+|. |+ +|++++.++...+.
T Consensus 129 ~~~~i~lDPGlAFGT----G~HpTT~l-cL~~Le~~-~~~g~~vlDvGcGS-GILaIAa~kL-GA~~v~g~DiDp~AV~a 200 (300)
T COG2264 129 DELNIELDPGLAFGT----GTHPTTSL-CLEALEKL-LKKGKTVLDVGCGS-GILAIAAAKL-GAKKVVGVDIDPQAVEA 200 (300)
T ss_pred CceEEEEccccccCC----CCChhHHH-HHHHHHHh-hcCCCEEEEecCCh-hHHHHHHHHc-CCceEEEecCCHHHHHH
Confidence 356778877775532 23333322 33333222 34899999999953 7777766665 66 69999999876655
Q ss_pred HHHH---cCCCeEeeCccHHHH-HhcCCCcCEEEEcC-CC--cccHHHHHHHhccCCEEEEeCCCC
Q 018158 224 AKEL---LGADEFILSTNAMQM-QAGKRTLDFILDTV-SA--KHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 224 ~~~~---~g~~~~v~~~~~~~~-~~~~~~~d~vid~~-g~--~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
++++ .+.+..+........ ...++.+|+|+-.+ .. .....++.+.++++|+++..|...
T Consensus 201 a~eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl~ 266 (300)
T COG2264 201 ARENARLNGVELLVQAKGFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGILE 266 (300)
T ss_pred HHHHHHHcCCchhhhcccccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeehH
Confidence 5553 233211100000000 11146899998544 11 123578889999999999999765
|
|
| >PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.026 Score=49.98 Aligned_cols=96 Identities=17% Similarity=0.172 Sum_probs=73.9
Q ss_pred cccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH
Q 018158 162 PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240 (360)
Q Consensus 162 ~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 240 (360)
.+||+..+.+..++...--- .|++++|+|- ..+|.=+..++...|++|++..+....+.
T Consensus 137 ~~PcTp~av~~lL~~~~i~l--~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~------------------ 196 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDI--EGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLK------------------ 196 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCC--CCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHH------------------
Confidence 56787777777777765323 7999999999 99999999999999999999875432221
Q ss_pred HHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 241 QMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 241 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+..+..|+++-++|....+. -+++++|..++++|...
T Consensus 197 ---~~~~~ADIvIsAvGkp~~i~--~~~ik~gavVIDvGin~ 233 (278)
T PRK14172 197 ---EVCKKADILVVAIGRPKFID--EEYVKEGAIVIDVGTSS 233 (278)
T ss_pred ---HHHhhCCEEEEcCCCcCccC--HHHcCCCcEEEEeeccc
Confidence 12356899999999876443 36799999999998764
|
|
| >TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.041 Score=47.14 Aligned_cols=96 Identities=15% Similarity=0.095 Sum_probs=62.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe--------------e--CccHHHHH-hcC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI--------------L--STNAMQMQ-AGK 246 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v--------------~--~~~~~~~~-~~~ 246 (360)
++.+||+.|+|. |.-++-+|. .|.+|++++.++...+.+.++.+..... . ..+..... ...
T Consensus 34 ~~~rvLd~GCG~-G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~ 111 (213)
T TIGR03840 34 AGARVFVPLCGK-SLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAADL 111 (213)
T ss_pred CCCeEEEeCCCc-hhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcccC
Confidence 778999999963 777777775 6999999999999888764434421100 0 00000000 112
Q ss_pred CCcCEEEEcCCC--------cccHHHHHHHhccCCEEEEeCCC
Q 018158 247 RTLDFILDTVSA--------KHSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 247 ~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
..+|.++|+..- ...++.+.++|+++|++..++..
T Consensus 112 ~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~~ 154 (213)
T TIGR03840 112 GPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITLD 154 (213)
T ss_pred CCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEEE
Confidence 468999997642 12367899999999987666543
|
Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity. |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.066 Score=47.06 Aligned_cols=98 Identities=15% Similarity=0.068 Sum_probs=62.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc-CCCeE-eeCcc-HHHH-HhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL-GADEF-ILSTN-AMQM-QAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~-g~~~~-v~~~~-~~~~-~~~~~~~d~vid~~g~ 258 (360)
.+.+++|+|+ |.+|..+++.+...|++|+++.|+.++........ +...+ .|..+ ...+ .....++|++|.+.|.
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~ 95 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGF 95 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCC
Confidence 4678999999 99999999888888999999999887654332211 12111 23333 2222 2223589999998774
Q ss_pred cc-------------cHHHHHHHhccC--CEEEEeCCC
Q 018158 259 KH-------------SLGPILELLKVN--GTLSVVGAP 281 (360)
Q Consensus 259 ~~-------------~~~~~~~~l~~~--G~~v~~g~~ 281 (360)
.. ....+++.++.. ++++.++..
T Consensus 96 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 96 RRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred CcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 21 123445555433 588887654
|
|
| >COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.021 Score=50.56 Aligned_cols=96 Identities=17% Similarity=0.203 Sum_probs=66.9
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCC-eE-eeCccHHHHHhcCCCcCEEEE--
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGAD-EF-ILSTNAMQMQAGKRTLDFILD-- 254 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~-~~-v~~~~~~~~~~~~~~~d~vid-- 254 (360)
++||+++|=+|+|- |-+++-+|+..|++|++++.|++..+.++++ .|.+ .+ +... ..+.....||-|+.
T Consensus 70 L~~G~~lLDiGCGW-G~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~---d~rd~~e~fDrIvSvg 145 (283)
T COG2230 70 LKPGMTLLDIGCGW-GGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQ---DYRDFEEPFDRIVSVG 145 (283)
T ss_pred CCCCCEEEEeCCCh-hHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEec---cccccccccceeeehh
Confidence 66999999999964 7778899999999999999999988877764 4533 11 1111 11223344888764
Q ss_pred ---cCCC---cccHHHHHHHhccCCEEEEeCCC
Q 018158 255 ---TVSA---KHSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 255 ---~~g~---~~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
-+|. ..-+..+.++|+++|++..-...
T Consensus 146 mfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~ 178 (283)
T COG2230 146 MFEHVGKENYDDFFKKVYALLKPGGRMLLHSIT 178 (283)
T ss_pred hHHHhCcccHHHHHHHHHhhcCCCceEEEEEec
Confidence 2333 22368889999999998765443
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.032 Score=49.60 Aligned_cols=75 Identities=24% Similarity=0.170 Sum_probs=56.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-----------eeCccHHHH----HhcCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-----------ILSTNAMQM----QAGKR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-----------v~~~~~~~~----~~~~~ 247 (360)
+...++|+|. .++|++.+.-++..|+.|+++.|+.+++..+++.++.... .+|...+.. +....
T Consensus 32 ~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~ 111 (331)
T KOG1210|consen 32 PRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEG 111 (331)
T ss_pred ccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccC
Confidence 5578899988 9999999999999999999999999999999887763211 122222221 22245
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
.+|.+|.|.|.
T Consensus 112 ~~d~l~~cAG~ 122 (331)
T KOG1210|consen 112 PIDNLFCCAGV 122 (331)
T ss_pred CcceEEEecCc
Confidence 78999999984
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.052 Score=49.02 Aligned_cols=99 Identities=12% Similarity=0.110 Sum_probs=62.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCh--hHHHHHHHH---cCCCe---EeeCccHHHHH-------hcCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSP--SKEKEAKEL---LGADE---FILSTNAMQMQ-------AGKR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~--~~~~~~~~~---~g~~~---~v~~~~~~~~~-------~~~~ 247 (360)
.++++||+|+ |++|.++++.+...|++|+++.++. ++.+.+.+. .|... ..|-.+.+... ...+
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 5789999999 9999999999989999999887543 233333321 34221 12333332221 1145
Q ss_pred CcCEEEEcCCCc--------------------------ccHHHHHHHhccCCEEEEeCCCC
Q 018158 248 TLDFILDTVSAK--------------------------HSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 248 ~~d~vid~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
++|+++++.|.. ..++.++..|+.+|+++.++...
T Consensus 128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~ 188 (294)
T PRK07985 128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQ 188 (294)
T ss_pred CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCch
Confidence 789999988731 11234555566778999887644
|
|
| >PRK05562 precorrin-2 dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.061 Score=46.10 Aligned_cols=93 Identities=17% Similarity=0.045 Sum_probs=62.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS-KEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~-~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
.+.+|||+|+|.++.-=+..+...|++|++++..-. ....+.+ .|.-..+. .+.+ ...-.++++||-|++.....
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~~-~~~i~~~~-r~~~--~~dl~g~~LViaATdD~~vN 99 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLKK-YGNLKLIK-GNYD--KEFIKDKHLIVIATDDEKLN 99 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHh-CCCEEEEe-CCCC--hHHhCCCcEEEECCCCHHHH
Confidence 678999999999999888888889999999986542 2333333 34222221 1110 11135799999999988765
Q ss_pred HHHHHHhccCCEEEEeCC
Q 018158 263 GPILELLKVNGTLSVVGA 280 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~ 280 (360)
..+....+..+.++....
T Consensus 100 ~~I~~~a~~~~~lvn~vd 117 (223)
T PRK05562 100 NKIRKHCDRLYKLYIDCS 117 (223)
T ss_pred HHHHHHHHHcCCeEEEcC
Confidence 666666666677766543
|
|
| >PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.035 Score=49.34 Aligned_cols=97 Identities=15% Similarity=0.159 Sum_probs=73.5
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+..+.+..|+..+--- .|++++|+|. ..+|.-++.++...|++|++.......+
T Consensus 136 ~~~PcTp~av~~lL~~~~i~l--~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l------------------ 195 (284)
T PRK14190 136 TFLPCTPHGILELLKEYNIDI--SGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNL------------------ 195 (284)
T ss_pred CCCCCCHHHHHHHHHHcCCCC--CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhH------------------
Confidence 356787777777777765333 7999999999 9999999999999999999876433211
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.+.-+..|+++-++|....+. -+++++|..++++|...
T Consensus 196 ---~~~~~~ADIvI~AvG~p~~i~--~~~ik~gavVIDvGi~~ 233 (284)
T PRK14190 196 ---AELTKQADILIVAVGKPKLIT--ADMVKEGAVVIDVGVNR 233 (284)
T ss_pred ---HHHHHhCCEEEEecCCCCcCC--HHHcCCCCEEEEeeccc
Confidence 122356899999999875433 36789999999999764
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.029 Score=49.15 Aligned_cols=75 Identities=23% Similarity=0.280 Sum_probs=52.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC-eE--eeCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD-EF--ILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~~--v~~~~~~~~~~-------~~~~~ 249 (360)
.+++++|+|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +.. .. .|..+.+.... .-..+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5688999999 99999999999999999999999887665554432 321 11 23333322221 13468
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|+++++.|.
T Consensus 87 d~li~~ag~ 95 (252)
T PRK07035 87 DILVNNAAA 95 (252)
T ss_pred CEEEECCCc
Confidence 999998873
|
|
| >PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.087 Score=40.33 Aligned_cols=87 Identities=18% Similarity=0.265 Sum_probs=61.0
Q ss_pred EEEEEcCChHHHHHHHHHHHc--CCeEE-EEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAF--GHHVT-VISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~--G~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
++.|+|.|.+|......++.. +.++. ++++++++.+.+.+++|.. . +.+.+.+.. ..++|+|+.++.......
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~--~~~~~~ll~-~~~~D~V~I~tp~~~h~~ 77 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-V--YTDLEELLA-DEDVDAVIIATPPSSHAE 77 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-E--ESSHHHHHH-HTTESEEEEESSGGGHHH
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-c--hhHHHHHHH-hhcCCEEEEecCCcchHH
Confidence 578999999998877666655 44654 6677777777777768866 3 233322221 247999999999888778
Q ss_pred HHHHHhccCCEEEEe
Q 018158 264 PILELLKVNGTLSVV 278 (360)
Q Consensus 264 ~~~~~l~~~G~~v~~ 278 (360)
.+..+++.|- .+.+
T Consensus 78 ~~~~~l~~g~-~v~~ 91 (120)
T PF01408_consen 78 IAKKALEAGK-HVLV 91 (120)
T ss_dssp HHHHHHHTTS-EEEE
T ss_pred HHHHHHHcCC-EEEE
Confidence 8888888876 4444
|
GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A .... |
| >PRK08317 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.042 Score=47.61 Aligned_cols=98 Identities=21% Similarity=0.244 Sum_probs=65.4
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHc-C--CCeEeeCccHHHHHhcCCCcCEEEEcC
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFG--HHVTVISTSPSKEKEAKELL-G--ADEFILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G--~~V~~~~~~~~~~~~~~~~~-g--~~~~v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
+.++++||-+|+|. |..+..+++..+ .++++++.+++.++.++++. . ....+...+..........+|+|+...
T Consensus 17 ~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 95 (241)
T PRK08317 17 VQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLPFPDGSFDAVRSDR 95 (241)
T ss_pred CCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCCCCCCCceEEEEec
Confidence 44899999999976 888888888873 58999999999888887741 1 111111111111111245789988543
Q ss_pred C------CcccHHHHHHHhccCCEEEEeCC
Q 018158 257 S------AKHSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 257 g------~~~~~~~~~~~l~~~G~~v~~g~ 280 (360)
. -...+..+.++|+++|.++....
T Consensus 96 ~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 125 (241)
T PRK08317 96 VLQHLEDPARALAEIARVLRPGGRVVVLDT 125 (241)
T ss_pred hhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence 2 12357899999999999987653
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.02 Score=52.93 Aligned_cols=95 Identities=18% Similarity=0.172 Sum_probs=63.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC----C-CeEee-CccHHHHHhcCCCcCEEEEcCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG----A-DEFIL-STNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g----~-~~~v~-~~~~~~~~~~~~~~d~vid~~g 257 (360)
.|+++.|+|.|.+|..+++.++.+|++|++++++..+... .. ++ . ....+ ......+.+.-...|+|+.+..
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~lP 235 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGVKLLATRRSWTSEPE-DG-LLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCCT 235 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCChhhh-hh-hccccccccccccccCcccCHHHHHhhCCEEEECCC
Confidence 5899999999999999999999999999999986332111 10 10 0 00000 0011223344567899998876
Q ss_pred Ccc-----cHHHHHHHhccCCEEEEeCC
Q 018158 258 AKH-----SLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 258 ~~~-----~~~~~~~~l~~~G~~v~~g~ 280 (360)
... .-...++.|+++..+++++.
T Consensus 236 lt~~T~~li~~~~l~~Mk~ga~lINvaR 263 (347)
T PLN02928 236 LTKETAGIVNDEFLSSMKKGALLVNIAR 263 (347)
T ss_pred CChHhhcccCHHHHhcCCCCeEEEECCC
Confidence 321 22578899999999998874
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.029 Score=49.94 Aligned_cols=74 Identities=15% Similarity=0.203 Sum_probs=50.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC---eEeeCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD---EFILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~-------~~~~~ 249 (360)
.++++||+|+ +++|.++++.+...|++|++++++ ++.+.+.+.+ +.. ...|-.+.+.... ...++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 5789999999 999999998888889999999998 5444333223 321 1134333322221 13568
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|++.|.
T Consensus 84 d~li~~Ag~ 92 (272)
T PRK08589 84 DVLFNNAGV 92 (272)
T ss_pred CEEEECCCC
Confidence 999999874
|
|
| >PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.014 Score=58.92 Aligned_cols=75 Identities=19% Similarity=0.248 Sum_probs=52.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChh---------------------HHHHHHHHcCCCeEeeCcc--HH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS---------------------KEKEAKELLGADEFILSTN--AM 240 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~---------------------~~~~~~~~~g~~~~v~~~~--~~ 240 (360)
.+++|+|+|+|+.|+.++..+...|++|+++++.+. +.+.+++ +|.+...+..- .-
T Consensus 326 ~~~~VaIIGaGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~-~Gv~~~~~~~v~~~i 404 (654)
T PRK12769 326 SDKRVAIIGAGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSA-MGIEFELNCEVGKDI 404 (654)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHH-CCeEEECCCEeCCcC
Confidence 689999999999999999999999999999987532 3445555 77543332211 00
Q ss_pred HHHhcCCCcCEEEEcCCCc
Q 018158 241 QMQAGKRTLDFILDTVSAK 259 (360)
Q Consensus 241 ~~~~~~~~~d~vid~~g~~ 259 (360)
.......++|.+|.++|..
T Consensus 405 ~~~~~~~~~DavilAtGa~ 423 (654)
T PRK12769 405 SLESLLEDYDAVFVGVGTY 423 (654)
T ss_pred CHHHHHhcCCEEEEeCCCC
Confidence 1122235799999999853
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.033 Score=49.09 Aligned_cols=75 Identities=19% Similarity=0.179 Sum_probs=53.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC---eEeeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD---EFILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~-------~~~~ 249 (360)
+++++||+|+ |.+|..+++.+...|++|++++++.++.+.+.+.+ +.. ...|..+.+..... ..++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i 90 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV 90 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999 99999999998889999999999988766554322 222 12344444333211 2468
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|.+|.+.|.
T Consensus 91 d~vi~~ag~ 99 (259)
T PRK08213 91 DILVNNAGA 99 (259)
T ss_pred CEEEECCCC
Confidence 999999874
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.034 Score=48.22 Aligned_cols=74 Identities=19% Similarity=0.067 Sum_probs=49.4
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHh----c---CCCcCEEEEc
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQA----G---KRTLDFILDT 255 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~----~---~~~~d~vid~ 255 (360)
++++||+|+ |++|..+++.+...|++|+++++++++.....+..|...+ .|..+.+.... . ..++|+++++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ 81 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN 81 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence 468999999 9999999998888999999999877543322222553211 23333322211 1 3469999999
Q ss_pred CCC
Q 018158 256 VSA 258 (360)
Q Consensus 256 ~g~ 258 (360)
.|.
T Consensus 82 ag~ 84 (236)
T PRK06483 82 ASD 84 (236)
T ss_pred Ccc
Confidence 874
|
|
| >COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.03 Score=50.98 Aligned_cols=98 Identities=16% Similarity=0.183 Sum_probs=69.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHc-CC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAF-GH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~-G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
...++.|+|+|..+...++.++.. +. +|.+.+++++..+.+.+.+....-..-...+..++.-.+.|+|+-|+.....
T Consensus 129 da~~laiIGaG~qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~P 208 (330)
T COG2423 129 DASTLAIIGAGAQARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTEP 208 (330)
T ss_pred CCcEEEEECCcHHHHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCCC
Confidence 467889999999999988888864 66 6999999998877666433321111111122334556889999999987764
Q ss_pred HHHHHHHhccCCEEEEeCCCC
Q 018158 262 LGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 262 ~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+-.. +++++|-++..+|...
T Consensus 209 il~~-~~l~~G~hI~aiGad~ 228 (330)
T COG2423 209 VLKA-EWLKPGTHINAIGADA 228 (330)
T ss_pred eecH-hhcCCCcEEEecCCCC
Confidence 3333 7899999999998643
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.029 Score=49.10 Aligned_cols=75 Identities=15% Similarity=0.241 Sum_probs=51.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe---EeeCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE---FILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~-------~~~~~ 249 (360)
.+++++|+|+ |.+|...++.+...|++|++++++.+....+.+.+ +... ..|..+.+.... ...++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 5688999999 99999999988888999999999876654443322 2211 233333332211 13469
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|.++|.
T Consensus 85 d~vi~~ag~ 93 (250)
T PRK07774 85 DYLVNNAAI 93 (250)
T ss_pred CEEEECCCC
Confidence 999999984
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.03 Score=49.95 Aligned_cols=73 Identities=19% Similarity=0.201 Sum_probs=52.5
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe---EeeCccHHHHHh-------cCCCcCEEEE
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE---FILSTNAMQMQA-------GKRTLDFILD 254 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~-------~~~~~d~vid 254 (360)
+++||+|+ |.+|..+++.+...|++|++++++.++.+.+++..+... ..|..+.+.... ...++|++|.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 57999999 999999998888889999999999888777766444321 123333322211 1356899999
Q ss_pred cCCC
Q 018158 255 TVSA 258 (360)
Q Consensus 255 ~~g~ 258 (360)
+.|.
T Consensus 83 ~ag~ 86 (276)
T PRK06482 83 NAGY 86 (276)
T ss_pred CCCC
Confidence 9874
|
|
| >PLN03075 nicotianamine synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.031 Score=49.98 Aligned_cols=96 Identities=13% Similarity=0.211 Sum_probs=66.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHcCC----CeEeeCc--cHHHHHhcCCCcCEEEEc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAF--GHHVTVISTSPSKEKEAKELLGA----DEFILST--NAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~--G~~V~~~~~~~~~~~~~~~~~g~----~~~v~~~--~~~~~~~~~~~~d~vid~ 255 (360)
++++|+-+|+|+.++.++.+++.+ +.+++.++.+++..+.+++.+.. ...+... +.........++|+||-.
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l~~FDlVF~~ 202 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESLKEYDVVFLA 202 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhcccccCCcCEEEEe
Confidence 678999999999999888888755 34799999999988888875522 1111111 111111113679999876
Q ss_pred CC-------CcccHHHHHHHhccCCEEEEeC
Q 018158 256 VS-------AKHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 256 ~g-------~~~~~~~~~~~l~~~G~~v~~g 279 (360)
+= -...+..+.+.|++||.++.-.
T Consensus 203 ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 203 ALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred cccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 41 1234688899999999887664
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.025 Score=51.37 Aligned_cols=75 Identities=21% Similarity=0.236 Sum_probs=51.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc----C-CC-e--EeeCccHHHHHhc-------CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL----G-AD-E--FILSTNAMQMQAG-------KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g-~~-~--~v~~~~~~~~~~~-------~~ 247 (360)
.+++++|+|+ |++|..+++.+...|++|++++++.++.+.+.+.+ + .. . ..|-.+.+..... ..
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 94 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP 94 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence 5789999999 99999999888888999999999887655433222 1 11 1 1243343322221 34
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|++|+++|.
T Consensus 95 ~iD~li~nAg~ 105 (306)
T PRK06197 95 RIDLLINNAGV 105 (306)
T ss_pred CCCEEEECCcc
Confidence 69999999873
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.031 Score=49.03 Aligned_cols=75 Identities=20% Similarity=0.260 Sum_probs=51.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCe-E--eeCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADE-F--ILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~-~--v~~~~~~~~~~-------~~~~~ 249 (360)
.+++++|+|+ |++|..+++.+...|++|++++++.++.+.+.+. .+... . .|..+.+.... ...++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999 9999999988888899999999998765544332 33221 1 23333322221 12468
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|+++++.|.
T Consensus 86 d~li~~ag~ 94 (253)
T PRK06172 86 DYAFNNAGI 94 (253)
T ss_pred CEEEECCCC
Confidence 999999874
|
|
| >PRK14967 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.1 Score=45.04 Aligned_cols=94 Identities=21% Similarity=0.208 Sum_probs=61.5
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHH---cCCCeEeeCccHHHHHhcCCCcCEEEEcCC
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKEL---LGADEFILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~---~g~~~~v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
+++++++|-.|+|. |..++.+++. ++ +|++++.+++..+.++++ .+....+...+.... .....+|+|+...+
T Consensus 34 ~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~-~~~~~fD~Vi~npP 110 (223)
T PRK14967 34 LGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA-VEFRPFDVVVSNPP 110 (223)
T ss_pred cCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh-ccCCCeeEEEECCC
Confidence 34889999999986 8888888875 65 899999999887766553 333222222222111 12457999997532
Q ss_pred Cc---------------------------ccHHHHHHHhccCCEEEEe
Q 018158 258 AK---------------------------HSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 258 ~~---------------------------~~~~~~~~~l~~~G~~v~~ 278 (360)
.. ..+..+.+.|+++|+++.+
T Consensus 111 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~ 158 (223)
T PRK14967 111 YVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV 158 (223)
T ss_pred CCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 10 1245677899999998865
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.034 Score=49.03 Aligned_cols=72 Identities=13% Similarity=0.060 Sum_probs=50.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE--eeCccHHHHHhc-------CCCcCEEE
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF--ILSTNAMQMQAG-------KRTLDFIL 253 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~--v~~~~~~~~~~~-------~~~~d~vi 253 (360)
++||+|+ +++|.++++.+...|++|+++++++++.+.+.+.+ +..+. .|-.+.+..... ..++|++|
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 5899999 99999999988889999999999988766554433 31111 233333222211 35799999
Q ss_pred EcCCC
Q 018158 254 DTVSA 258 (360)
Q Consensus 254 d~~g~ 258 (360)
++.|.
T Consensus 82 ~naG~ 86 (259)
T PRK08340 82 WNAGN 86 (259)
T ss_pred ECCCC
Confidence 99874
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.029 Score=49.05 Aligned_cols=74 Identities=15% Similarity=0.136 Sum_probs=49.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhH--HHHHHHHcCCCe-E--eeCccHHHHHh-------cCCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSK--EKEAKELLGADE-F--ILSTNAMQMQA-------GKRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~--~~~~~~~~g~~~-~--v~~~~~~~~~~-------~~~~~d 250 (360)
.++++||+|+ |++|..++..+...|++|++++++... .+.+.+ .+... . .|..+.+.... ...++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEA-LGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999999 999999999888899999999987531 222233 44321 1 23333332221 135799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
+++++.|.
T Consensus 83 ~li~~ag~ 90 (248)
T TIGR01832 83 ILVNNAGI 90 (248)
T ss_pred EEEECCCC
Confidence 99999874
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.073 Score=40.55 Aligned_cols=89 Identities=20% Similarity=0.214 Sum_probs=60.7
Q ss_pred EEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe--eCccHHHHHhc-CCCcCEEEEcCCCcccHHH
Q 018158 188 IGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI--LSTNAMQMQAG-KRTLDFILDTVSAKHSLGP 264 (360)
Q Consensus 188 vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v--~~~~~~~~~~~-~~~~d~vid~~g~~~~~~~ 264 (360)
++|+|.|.+|...++.++..+.+|++++.++++.+.+++ .|.. ++ |..+.+.++.. -.+++.++-+++.....-.
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~-~~~~-~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~n~~ 78 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGIDVVVIDRDPERVEELRE-EGVE-VIYGDATDPEVLERAGIEKADAVVILTDDDEENLL 78 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH-TTSE-EEES-TTSHHHHHHTTGGCESEEEEESSSHHHHHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh-cccc-cccccchhhhHHhhcCccccCEEEEccCCHHHHHH
Confidence 578999999999999999977799999999999999988 6643 33 34444444444 4679999988876643223
Q ss_pred HHHHh---ccCCEEEEe
Q 018158 265 ILELL---KVNGTLSVV 278 (360)
Q Consensus 265 ~~~~l---~~~G~~v~~ 278 (360)
+...+ .+..+++..
T Consensus 79 ~~~~~r~~~~~~~ii~~ 95 (116)
T PF02254_consen 79 IALLARELNPDIRIIAR 95 (116)
T ss_dssp HHHHHHHHTTTSEEEEE
T ss_pred HHHHHHHHCCCCeEEEE
Confidence 32333 334455443
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.029 Score=56.75 Aligned_cols=110 Identities=16% Similarity=0.173 Sum_probs=70.8
Q ss_pred ceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEE
Q 018158 136 GYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVI 214 (360)
Q Consensus 136 ~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~ 214 (360)
+...|..+++...+.+ +..+.+++=.- .......-.++++||+|+ |++|.++++.+...|++|+++
T Consensus 378 ~~~~~~~~~~~~~f~~-eyw~~e~~kl~------------~~~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~ 444 (676)
T TIGR02632 378 AVSEYVSLPEQEAFDI-EYWPLEEAKLR------------RMPKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLA 444 (676)
T ss_pred cccceecCchhhccch-hhhhhhHHhhc------------cCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEE
Confidence 3466777777777777 66666654211 111111115789999999 999999999888899999999
Q ss_pred eCChhHHHHHHHHc----CCCe----EeeCccHHHHHhc-------CCCcCEEEEcCCC
Q 018158 215 STSPSKEKEAKELL----GADE----FILSTNAMQMQAG-------KRTLDFILDTVSA 258 (360)
Q Consensus 215 ~~~~~~~~~~~~~~----g~~~----~v~~~~~~~~~~~-------~~~~d~vid~~g~ 258 (360)
+++.++.+.+.+.+ +... ..|-.+.+..... ..++|++|++.|.
T Consensus 445 ~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~ 503 (676)
T TIGR02632 445 DLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGI 503 (676)
T ss_pred eCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence 99987766554332 3211 1243333333221 3479999999984
|
|
| >COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.061 Score=49.07 Aligned_cols=89 Identities=26% Similarity=0.288 Sum_probs=65.8
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCC-cc--
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSA-KH-- 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~-~~-- 260 (360)
.|+++-|+|.|.+|.+.++.++..|++|+..++++. .+..+. .++.++- ..+.-...|++.-..+. ..
T Consensus 145 ~gktvGIiG~GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~~~-~~~~y~~-------l~ell~~sDii~l~~Plt~~T~ 215 (324)
T COG1052 145 RGKTLGIIGLGRIGQAVARRLKGFGMKVLYYDRSPN-PEAEKE-LGARYVD-------LDELLAESDIISLHCPLTPETR 215 (324)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCCC-hHHHhh-cCceecc-------HHHHHHhCCEEEEeCCCChHHh
Confidence 589999999999999999999999999999998875 233333 4444331 22344678998766553 22
Q ss_pred --cHHHHHHHhccCCEEEEeCCC
Q 018158 261 --SLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 261 --~~~~~~~~l~~~G~~v~~g~~ 281 (360)
.-...+..|++++.+|.++.-
T Consensus 216 hLin~~~l~~mk~ga~lVNtaRG 238 (324)
T COG1052 216 HLINAEELAKMKPGAILVNTARG 238 (324)
T ss_pred hhcCHHHHHhCCCCeEEEECCCc
Confidence 135788999999999999753
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.074 Score=47.91 Aligned_cols=99 Identities=15% Similarity=0.154 Sum_probs=61.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhH-HHHHHHH---cCCCeE---eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSK-EKEAKEL---LGADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~-~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |.+|..++..+...|++|++++++.++ .+.+... .|.... .|..+.+..... ..+
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~ 124 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGR 124 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999 999999888888889999999877532 2222221 243221 233333222211 357
Q ss_pred cCEEEEcCCCcc--------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 249 LDFILDTVSAKH--------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 249 ~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+|++|.+.|... ..+.+...+++.|+++.++...
T Consensus 125 iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~ 184 (290)
T PRK06701 125 LDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSIT 184 (290)
T ss_pred CCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence 899999887420 1223345556678999887643
|
|
| >PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms [] | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.18 Score=39.24 Aligned_cols=91 Identities=15% Similarity=0.305 Sum_probs=60.6
Q ss_pred EEEEcC-ChHHHHHHHHHHHcC--CeEEEEe--CChhHHHHHHHHcCCCeEeeCccH--HHH------------------
Q 018158 188 IGIVGL-GGLGHVAVKFGKAFG--HHVTVIS--TSPSKEKEAKELLGADEFILSTNA--MQM------------------ 242 (360)
Q Consensus 188 vlI~Ga-g~vG~~aiqla~~~G--~~V~~~~--~~~~~~~~~~~~~g~~~~v~~~~~--~~~------------------ 242 (360)
+.|+|+ |.+|..++.+.+... ++|++.. ++-+.+.....+|.+..++..++. ...
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~ 80 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE 80 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence 578999 999999999999987 5666555 344454444444888777655443 111
Q ss_pred --Hhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEe
Q 018158 243 --QAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 243 --~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
.+. ...+|+++++..+...+...+..++.+-++...
T Consensus 81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaLA 120 (129)
T PF02670_consen 81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIALA 120 (129)
T ss_dssp HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE-
T ss_pred HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEEe
Confidence 111 367999999998888899999999988776543
|
In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A .... |
| >PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.081 Score=49.02 Aligned_cols=93 Identities=15% Similarity=0.251 Sum_probs=67.4
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHc--CCeEEEEe--CChhHHHHHHHHcCCCeEeeCccH--HHHHh--------------
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAF--GHHVTVIS--TSPSKEKEAKELLGADEFILSTNA--MQMQA-------------- 244 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~--G~~V~~~~--~~~~~~~~~~~~~g~~~~v~~~~~--~~~~~-------------- 244 (360)
++|.|+|+ |.+|..++...+.. .++|++++ ++.+++....++|++..++..++. ...+.
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~ 81 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE 81 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence 57899998 99999999988765 46777775 566666666666998877644432 11111
Q ss_pred ----c--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEe
Q 018158 245 ----G--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 245 ----~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
. ...+|+|++++++...+...+..++.|.++...
T Consensus 82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLA 121 (385)
T PRK05447 82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALA 121 (385)
T ss_pred HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEe
Confidence 0 235999999999887888899999998777664
|
|
| >PRK08291 ectoine utilization protein EutC; Validated | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.047 Score=50.19 Aligned_cols=94 Identities=15% Similarity=0.197 Sum_probs=63.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHH-cCC-eEEEEeCChhHHHHHHHHc----CCCeEeeCccHHHHHhcCCCcCEEEEcCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKA-FGH-HVTVISTSPSKEKEAKELL----GADEFILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~-~G~-~V~~~~~~~~~~~~~~~~~----g~~~~v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
..++++|+|+|..|.+.+..+.. .+. +|.+..++.++.+.+.+++ |.. +....+. .+.-.+.|+|+.+++
T Consensus 131 ~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~~d~---~~al~~aDiVi~aT~ 206 (330)
T PRK08291 131 DASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVARDV---HEAVAGADIIVTTTP 206 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEeCCH---HHHHccCCEEEEeeC
Confidence 45789999999999987776664 565 6999999999887776644 322 2222222 223356899999998
Q ss_pred CcccHHHHHHHhccCCEEEEeCCCC
Q 018158 258 AKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 258 ~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
....+-.. .+++++-++..+|...
T Consensus 207 s~~p~i~~-~~l~~g~~v~~vg~d~ 230 (330)
T PRK08291 207 SEEPILKA-EWLHPGLHVTAMGSDA 230 (330)
T ss_pred CCCcEecH-HHcCCCceEEeeCCCC
Confidence 65432222 4578887888887643
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.034 Score=48.70 Aligned_cols=75 Identities=17% Similarity=0.163 Sum_probs=52.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc--CCC-eE--eeCccHHHHHhc-------CCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL--GAD-EF--ILSTNAMQMQAG-------KRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~--g~~-~~--v~~~~~~~~~~~-------~~~~d 250 (360)
++++++|+|+ |.+|..+++.+...|++|++++++.++.+...+.+ +.. .. .|..+.+..... ..++|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999999 99999988888888999999999987665554433 321 11 233333332221 35799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
+++.+.|.
T Consensus 84 ~vi~~ag~ 91 (252)
T PRK06138 84 VLVNNAGF 91 (252)
T ss_pred EEEECCCC
Confidence 99999984
|
|
| >PRK00811 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.078 Score=47.60 Aligned_cols=95 Identities=18% Similarity=0.232 Sum_probs=64.1
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCC-------C---eEeeCccHHHHHhcCCCcCEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGA-------D---EFILSTNAMQMQAGKRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~-------~---~~v~~~~~~~~~~~~~~~d~v 252 (360)
..++||++|+|. |.++..+++..+. +|++++.+++-.+.+++.+.. + .++..+.........+.+|+|
T Consensus 76 ~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDvI 154 (283)
T PRK00811 76 NPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKFVAETENSFDVI 154 (283)
T ss_pred CCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECchHHHHhhCCCcccEE
Confidence 568899999865 6677777887665 799999999988888875531 1 122222223333335689999
Q ss_pred EEcCCC----------cccHHHHHHHhccCCEEEEeC
Q 018158 253 LDTVSA----------KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 253 id~~g~----------~~~~~~~~~~l~~~G~~v~~g 279 (360)
+.-... ...+..+.+.|+++|.++.-.
T Consensus 155 i~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~ 191 (283)
T PRK00811 155 IVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQS 191 (283)
T ss_pred EECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeC
Confidence 853321 123568889999999998653
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.04 Score=48.38 Aligned_cols=75 Identities=19% Similarity=0.276 Sum_probs=52.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe-E--eeCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE-F--ILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~-~--v~~~~~~~~~~-------~~~~~ 249 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +... . .|-.+.+.... ...++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999999 99999999998889999999999887765554333 3211 1 23333322221 13569
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|+++.+.|.
T Consensus 88 d~vi~~ag~ 96 (254)
T PRK08085 88 DVLINNAGI 96 (254)
T ss_pred CEEEECCCc
Confidence 999999974
|
|
| >PLN02366 spermidine synthase | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.076 Score=48.12 Aligned_cols=95 Identities=16% Similarity=0.228 Sum_probs=62.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCC------C---eEeeCccHHHHHhc-CCCcCEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGA------D---EFILSTNAMQMQAG-KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~------~---~~v~~~~~~~~~~~-~~~~d~v 252 (360)
..++||++|+|. |.++..++++.+. +|++++.+++-.+.+++.++. + .++..+....++.. .+.+|+|
T Consensus 91 ~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yDvI 169 (308)
T PLN02366 91 NPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYDAI 169 (308)
T ss_pred CCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCCEE
Confidence 678999999865 5567788887665 799999998877777775431 1 11222222233333 4579999
Q ss_pred EEcCCC----------cccHHHHHHHhccCCEEEEeC
Q 018158 253 LDTVSA----------KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 253 id~~g~----------~~~~~~~~~~l~~~G~~v~~g 279 (360)
|.-... ...+..+.+.|+++|.++.-+
T Consensus 170 i~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~ 206 (308)
T PLN02366 170 IVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA 206 (308)
T ss_pred EEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence 853322 123678889999999997643
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.039 Score=48.59 Aligned_cols=75 Identities=16% Similarity=0.131 Sum_probs=52.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHH---cCCCe---EeeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKEL---LGADE---FILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~ 248 (360)
.+++++|+|+ |++|..+++.+...|++ |++++++.++.....+. .+... ..|..+.+..... -.+
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5788999999 99999999999999998 99999987655433221 34321 2344444332221 246
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|++.|.
T Consensus 85 id~li~~ag~ 94 (260)
T PRK06198 85 LDALVNAAGL 94 (260)
T ss_pred CCEEEECCCc
Confidence 9999999974
|
|
| >PRK11207 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.055 Score=45.76 Aligned_cols=92 Identities=18% Similarity=0.222 Sum_probs=59.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE-eeCccHHHHHhcCCCcCEEEEcCCC-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF-ILSTNAMQMQAGKRTLDFILDTVSA- 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~-v~~~~~~~~~~~~~~~d~vid~~g~- 258 (360)
++.+||-+|+|. |..+..+++. |.+|++++.+++-.+.+++.. +...+ +...+.... .....+|+|+.....
T Consensus 30 ~~~~vLDiGcG~-G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~I~~~~~~~ 106 (197)
T PRK11207 30 KPGKTLDLGCGN-GRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNNL-TFDGEYDFILSTVVLM 106 (197)
T ss_pred CCCcEEEECCCC-CHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhhC-CcCCCcCEEEEecchh
Confidence 667899999864 7777788875 889999999998776665532 22211 111111111 124569999976431
Q ss_pred -------cccHHHHHHHhccCCEEEEe
Q 018158 259 -------KHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 259 -------~~~~~~~~~~l~~~G~~v~~ 278 (360)
...+..+.+.|+++|.++.+
T Consensus 107 ~~~~~~~~~~l~~i~~~LkpgG~~~~~ 133 (197)
T PRK11207 107 FLEAKTIPGLIANMQRCTKPGGYNLIV 133 (197)
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 13467888899999996544
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.1 Score=47.54 Aligned_cols=91 Identities=19% Similarity=0.192 Sum_probs=58.4
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH----------cCCC--e---EeeCccHHHHHhcCCCc
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL----------LGAD--E---FILSTNAMQMQAGKRTL 249 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~----------~g~~--~---~v~~~~~~~~~~~~~~~ 249 (360)
=++|.|+|+|.+|...++.+...|.+|++.+++++..+.+++. .|.. . .+... ....+.-.+.
T Consensus 7 i~~VaVIGaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~--~~l~~av~~a 84 (321)
T PRK07066 7 IKTFAAIGSGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFV--ATIEACVADA 84 (321)
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceec--CCHHHHhcCC
Confidence 3679999999999998888888999999999998866554331 1110 0 00000 1122334789
Q ss_pred CEEEEcCCCcc-----cHHHHHHHhccCCEEEEe
Q 018158 250 DFILDTVSAKH-----SLGPILELLKVNGTLSVV 278 (360)
Q Consensus 250 d~vid~~g~~~-----~~~~~~~~l~~~G~~v~~ 278 (360)
|+|++++.... .+..+-+.++++ .++..
T Consensus 85 DlViEavpE~l~vK~~lf~~l~~~~~~~-aIlaS 117 (321)
T PRK07066 85 DFIQESAPEREALKLELHERISRAAKPD-AIIAS 117 (321)
T ss_pred CEEEECCcCCHHHHHHHHHHHHHhCCCC-eEEEE
Confidence 99999998543 244555566666 44443
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.025 Score=46.24 Aligned_cols=90 Identities=22% Similarity=0.330 Sum_probs=58.7
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHHH
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPI 265 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 265 (360)
.+|-++|.|.+|...++-+...|++|++.++++++.+.+.+ .|+..+ .+. .+.....|+||-|+........+
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~-~g~~~~---~s~---~e~~~~~dvvi~~v~~~~~v~~v 74 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE-AGAEVA---DSP---AEAAEQADVVILCVPDDDAVEAV 74 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH-TTEEEE---SSH---HHHHHHBSEEEE-SSSHHHHHHH
T ss_pred CEEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH-hhhhhh---hhh---hhHhhcccceEeecccchhhhhh
Confidence 36789999999999988888899999999999999999888 664322 122 12233469999999875544444
Q ss_pred H------HHhccCCEEEEeCCCC
Q 018158 266 L------ELLKVNGTLSVVGAPE 282 (360)
Q Consensus 266 ~------~~l~~~G~~v~~g~~~ 282 (360)
+ ..++++..+++.+..+
T Consensus 75 ~~~~~i~~~l~~g~iiid~sT~~ 97 (163)
T PF03446_consen 75 LFGENILAGLRPGKIIIDMSTIS 97 (163)
T ss_dssp HHCTTHGGGS-TTEEEEE-SS--
T ss_pred hhhhHHhhccccceEEEecCCcc
Confidence 3 3345566666665443
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.036 Score=49.38 Aligned_cols=75 Identities=17% Similarity=0.194 Sum_probs=51.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC-----CC-eE--eeCccHHHHHhc-------CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG-----AD-EF--ILSTNAMQMQAG-------KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g-----~~-~~--v~~~~~~~~~~~-------~~ 247 (360)
+++++||+|+ |.+|..+++.+...|++|++++++.++.+...+.+. .. .+ .|-.+.+..... ..
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4789999999 999999999999999999999998776554433221 11 11 233333222211 34
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|++|.+.|.
T Consensus 86 ~~d~li~~ag~ 96 (276)
T PRK05875 86 RLHGVVHCAGG 96 (276)
T ss_pred CCCEEEECCCc
Confidence 78999999873
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.053 Score=47.65 Aligned_cols=74 Identities=20% Similarity=0.274 Sum_probs=52.0
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC--e--EeeCccHHHHHhc-------CCCcCEE
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD--E--FILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~--~--~v~~~~~~~~~~~-------~~~~d~v 252 (360)
+++++|+|+ |.+|...+..+...|++|++++++.++.+.+.+.+... + ..|..+.+..... ..++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999999 99999988888888999999999988776655434211 1 1244443333211 2468999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
+.+.|.
T Consensus 82 i~~ag~ 87 (257)
T PRK07074 82 VANAGA 87 (257)
T ss_pred EECCCC
Confidence 999974
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.096 Score=46.08 Aligned_cols=74 Identities=12% Similarity=0.131 Sum_probs=48.0
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHH---cCCCeE---eeCccHHHHHh-------cCCCc
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIST-SPSKEKEAKEL---LGADEF---ILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~-~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~-------~~~~~ 249 (360)
++++||+|+ |++|..+++.+...|++|+++.+ +.++.+.+.+. .|.... .|-.+.+.... ...++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999 99999999999999999988764 44443333221 453222 23333322211 13578
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|.+.|.
T Consensus 82 d~li~~ag~ 90 (256)
T PRK12743 82 DVLVNNAGA 90 (256)
T ss_pred CEEEECCCC
Confidence 999998874
|
|
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.04 Score=55.16 Aligned_cols=76 Identities=16% Similarity=0.347 Sum_probs=61.4
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhc-CCCcCEEEEcCCCccc
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAG-KRTLDFILDTVSAKHS 261 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~-~~~~d~vid~~g~~~~ 261 (360)
.++++|+|.|.+|+..++.++..|.++++++.++++.+.+++ .|...+ -|..+.+..++. -.++|.++-++++...
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~-~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~d~~~ 477 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRK-FGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQT 477 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh-cCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeCCHHH
Confidence 468999999999999999999999999999999999999988 885433 255555555544 4689999999987654
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.055 Score=48.16 Aligned_cols=75 Identities=17% Similarity=0.226 Sum_probs=53.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC------eEeeCccHHHHHh-------c-
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD------EFILSTNAMQMQA-------G- 245 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~------~~v~~~~~~~~~~-------~- 245 (360)
.|+.+||+|+ .++|.+++..+-..|++|+++++++++.+..+..+ +.. ...|-.+.+.... .
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~ 86 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKF 86 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHh
Confidence 6899999999 99999999999999999999999999876655432 221 1123332222211 1
Q ss_pred CCCcCEEEEcCCC
Q 018158 246 KRTLDFILDTVSA 258 (360)
Q Consensus 246 ~~~~d~vid~~g~ 258 (360)
.++.|++++..|.
T Consensus 87 ~GkidiLvnnag~ 99 (270)
T KOG0725|consen 87 FGKIDILVNNAGA 99 (270)
T ss_pred CCCCCEEEEcCCc
Confidence 4679999998874
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.041 Score=47.86 Aligned_cols=75 Identities=17% Similarity=0.252 Sum_probs=53.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe-E--eeCccHHHHHh-------cCCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE-F--ILSTNAMQMQA-------GKRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-~--v~~~~~~~~~~-------~~~~~d~v 252 (360)
++++++|+|+ |.+|..+++.+...|++|+...++.++++.+...++... . .|-.+.+.... ...++|++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4689999999 999999999988899999999888877776655454321 1 23333322221 13579999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|.+.|.
T Consensus 85 i~~ag~ 90 (245)
T PRK12936 85 VNNAGI 90 (245)
T ss_pred EECCCC
Confidence 999884
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.043 Score=54.33 Aligned_cols=73 Identities=25% Similarity=0.263 Sum_probs=58.5
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe-eCccHHHHHhc-CCCcCEEEEcCCCc
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI-LSTNAMQMQAG-KRTLDFILDTVSAK 259 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~-~~~~d~vid~~g~~ 259 (360)
+.++|+|.|.+|..+++.++..|.+|++++.++++.+.+++ .|...+. |..+.+..++. -+++|.++-+++++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~-~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~~~ 492 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE-RGIRAVLGNAANEEIMQLAHLDCARWLLLTIPNG 492 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-CCCeEEEcCCCCHHHHHhcCccccCEEEEEcCCh
Confidence 78899999999999999999999999999999999999987 7754333 44444444544 36899888777664
|
|
| >PTZ00098 phosphoethanolamine N-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.03 Score=49.72 Aligned_cols=98 Identities=18% Similarity=0.196 Sum_probs=64.7
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-eE-eeCccHHHHHhcCCCcCEEEEcC---
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-EF-ILSTNAMQMQAGKRTLDFILDTV--- 256 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~-v~~~~~~~~~~~~~~~d~vid~~--- 256 (360)
++++.+||=+|+|. |..+..+++..+++|++++.+++..+.+++++... .+ +...+.....-....+|+|+..-
T Consensus 50 l~~~~~VLDiGcG~-G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D~~~~~~~~~~FD~V~s~~~l~ 128 (263)
T PTZ00098 50 LNENSKVLDIGSGL-GGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEANDILKKDFPENTFDMIYSRDAIL 128 (263)
T ss_pred CCCCCEEEEEcCCC-ChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEECCcccCCCCCCCeEEEEEhhhHH
Confidence 45899999999863 55566777777899999999999888888754421 11 11111111111135699998621
Q ss_pred --C---CcccHHHHHHHhccCCEEEEeCC
Q 018158 257 --S---AKHSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 257 --g---~~~~~~~~~~~l~~~G~~v~~g~ 280 (360)
+ ....+..+.+.|++||+++....
T Consensus 129 h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 129 HLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 1 12346788899999999987754
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.04 Score=48.64 Aligned_cols=74 Identities=12% Similarity=0.129 Sum_probs=50.5
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCe---EeeCccHHHHHhc-------CCCcC
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADE---FILSTNAMQMQAG-------KRTLD 250 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~d 250 (360)
++++||+|+ |.+|..+++.+...|++|++++++.++.+.+.+. .+... ..|..+.+..... ..++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 357999999 9999999999889999999999987765544332 23321 1233333322211 24799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|.+.|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999874
|
|
| >PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.042 Score=48.77 Aligned_cols=97 Identities=18% Similarity=0.207 Sum_probs=73.7
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+..+.+..|+..+--- .|++++|+|- ..+|.=++.++...|++|++..+....+.
T Consensus 134 ~~~PcTp~avi~lL~~~~i~l--~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~----------------- 194 (282)
T PRK14169 134 TVVASTPYGIMALLDAYDIDV--AGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLK----------------- 194 (282)
T ss_pred CCCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHH-----------------
Confidence 356777777777777665333 7999999999 99999999999999999998864432221
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
...+..|+++-++|....+. -+++++|..++++|...
T Consensus 195 ----~~~~~ADIvI~AvG~p~~i~--~~~vk~GavVIDvGin~ 231 (282)
T PRK14169 195 ----QLTKEADILVVAVGVPHFIG--ADAVKPGAVVIDVGISR 231 (282)
T ss_pred ----HHHhhCCEEEEccCCcCccC--HHHcCCCcEEEEeeccc
Confidence 12356899999999876433 36899999999999754
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.034 Score=48.26 Aligned_cols=88 Identities=18% Similarity=0.301 Sum_probs=62.3
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChh--HHHHHHHHcCCCeE-eeCccHHHHHhcCCCcCEEEEcCCCc---c
Q 018158 188 IGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPS--KEKEAKELLGADEF-ILSTNAMQMQAGKRTLDFILDTVSAK---H 260 (360)
Q Consensus 188 vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~--~~~~~~~~~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g~~---~ 260 (360)
|+|+|+ |.+|..+++.+...+.+|.++.|+.. ..+.++. .|++.+ .|+.+.+.+...-+++|.||.+++.. .
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~-~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~~~~ 79 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQA-LGAEVVEADYDDPESLVAALKGVDAVFSVTPPSHPSE 79 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHH-TTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSCCCH
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhc-ccceEeecccCCHHHHHHHHcCCceEEeecCcchhhh
Confidence 689999 99999999999998999999999864 3455566 787543 35656666666678999999999832 1
Q ss_pred --cHHHHHHHhccCC--EEE
Q 018158 261 --SLGPILELLKVNG--TLS 276 (360)
Q Consensus 261 --~~~~~~~~l~~~G--~~v 276 (360)
....++++.+.-| +++
T Consensus 80 ~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 80 LEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp HHHHHHHHHHHHHHT-SEEE
T ss_pred hhhhhhHHHhhhccccceEE
Confidence 1234555555544 454
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.11 Score=44.58 Aligned_cols=73 Identities=15% Similarity=0.145 Sum_probs=49.6
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE--eeCccHHHHHhc---CCCcCEEEEcCCC
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF--ILSTNAMQMQAG---KRTLDFILDTVSA 258 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~--v~~~~~~~~~~~---~~~~d~vid~~g~ 258 (360)
.+++||+|+ |.+|..++..+... .+|++++++.++.+.+.+.+...++ .|-.+.+..... ..++|++|.+.|.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 81 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV 81 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 357999999 99999888777766 8999999998876666542321122 233333333322 2379999999874
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.018 Score=52.32 Aligned_cols=89 Identities=19% Similarity=0.212 Sum_probs=63.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc--
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS-- 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~-- 261 (360)
.|+++.|+|.|.+|...++.++..|++|++.+++.++.. +.+.+. ......+.-.+.|+|+.+......
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~---~~~~l~e~l~~aDvvv~~lPlt~~T~ 205 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA---GREELSAFLSQTRVLINLLPNTPETV 205 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec---ccccHHHHHhcCCEEEECCCCCHHHH
Confidence 679999999999999999999999999999987653211 212221 112233445678999988874322
Q ss_pred ---HHHHHHHhccCCEEEEeCCC
Q 018158 262 ---LGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 262 ---~~~~~~~l~~~G~~v~~g~~ 281 (360)
-...++.|+++..++++|.-
T Consensus 206 ~li~~~~l~~mk~ga~lIN~aRG 228 (312)
T PRK15469 206 GIINQQLLEQLPDGAYLLNLARG 228 (312)
T ss_pred HHhHHHHHhcCCCCcEEEECCCc
Confidence 24577889999988888753
|
|
| >PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+) | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.042 Score=49.11 Aligned_cols=97 Identities=14% Similarity=0.128 Sum_probs=74.1
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
+.+||+....+..++..+.-- .|++++|+|- ..+|.=+..++...|++|++.......+
T Consensus 145 ~~~PcTp~avi~lL~~~~i~l--~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl------------------ 204 (299)
T PLN02516 145 LFLPCTPKGCLELLSRSGIPI--KGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDP------------------ 204 (299)
T ss_pred CCCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCH------------------
Confidence 457888777777787765322 6999999999 9999999999999999999997543221
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.+..+..|+++-++|....+. -+++++|..++++|...
T Consensus 205 ---~~~~~~ADIvv~AvGk~~~i~--~~~vk~gavVIDvGin~ 242 (299)
T PLN02516 205 ---ESIVREADIVIAAAGQAMMIK--GDWIKPGAAVIDVGTNA 242 (299)
T ss_pred ---HHHHhhCCEEEEcCCCcCccC--HHHcCCCCEEEEeeccc
Confidence 122357899999999864333 47899999999999754
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.04 Score=49.17 Aligned_cols=74 Identities=16% Similarity=0.169 Sum_probs=51.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe---EeeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE---FILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~ 249 (360)
.+++++|+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ +... ..|..+.+..... -.++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 99999999999899999999999887665544422 3221 1233333222111 3579
Q ss_pred CEEEEcCC
Q 018158 250 DFILDTVS 257 (360)
Q Consensus 250 d~vid~~g 257 (360)
|++|+++|
T Consensus 89 d~li~~ag 96 (278)
T PRK08277 89 DILINGAG 96 (278)
T ss_pred CEEEECCC
Confidence 99999987
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.056 Score=44.48 Aligned_cols=41 Identities=20% Similarity=0.157 Sum_probs=34.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHH
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEA 224 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~ 224 (360)
.+++++|.|+ +++|...+..+...|++|++++++.++.+..
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~ 56 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQAT 56 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 5789999999 8999999888888899999999887765443
|
|
| >PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.042 Score=48.86 Aligned_cols=96 Identities=19% Similarity=0.166 Sum_probs=73.5
Q ss_pred cccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH
Q 018158 162 PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240 (360)
Q Consensus 162 ~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 240 (360)
.+||+..+.+..|+..+--- .|++++|+|. ..+|.=+..++...|++|++..+....+.
T Consensus 134 ~~PcTp~avi~lL~~~~i~l--~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~------------------ 193 (287)
T PRK14173 134 LEPCTPAGVVRLLKHYGIPL--AGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLP------------------ 193 (287)
T ss_pred CCCCCHHHHHHHHHHcCCCC--CCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHH------------------
Confidence 56777777777777665322 7999999999 99999999999999999998875443221
Q ss_pred HHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 241 QMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 241 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
...+..|+++-++|....+ --+++++|..++++|...
T Consensus 194 ---~~~~~ADIvIsAvGkp~~i--~~~~vk~GavVIDVGin~ 230 (287)
T PRK14173 194 ---AVTRRADVLVVAVGRPHLI--TPEMVRPGAVVVDVGINR 230 (287)
T ss_pred ---HHHhhCCEEEEecCCcCcc--CHHHcCCCCEEEEccCcc
Confidence 1235689999999987544 247899999999999764
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.061 Score=46.50 Aligned_cols=83 Identities=19% Similarity=0.264 Sum_probs=61.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHH-HcCCCe-EeeCccHHHHHhc-CCCcCEEEEcCCCcccHH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKE-LLGADE-FILSTNAMQMQAG-KRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~-~~g~~~-~v~~~~~~~~~~~-~~~~d~vid~~g~~~~~~ 263 (360)
+++|+|+|.+|...++.+...|..|+++++++++..+..+ .+.... +.+..+.+.++.+ -..+|+++-++|... .+
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~-~N 80 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDE-VN 80 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCH-HH
Confidence 5889999999999999999999999999999998777333 244322 2355555666666 478999999998864 34
Q ss_pred HHHHHhc
Q 018158 264 PILELLK 270 (360)
Q Consensus 264 ~~~~~l~ 270 (360)
.++..+.
T Consensus 81 ~i~~~la 87 (225)
T COG0569 81 SVLALLA 87 (225)
T ss_pred HHHHHHH
Confidence 4444443
|
|
| >COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.044 Score=48.47 Aligned_cols=120 Identities=14% Similarity=0.190 Sum_probs=86.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH------------------HHHHhc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA------------------MQMQAG 245 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~------------------~~~~~~ 245 (360)
++.++++.|.|..|+.++-.++..|+-|+..+....+.+..++ +|++..-..++. ....+.
T Consensus 163 ~pA~vlv~G~Gvagl~aiata~~lG~iVt~rdlrm~~Keqv~s-~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a~~ 241 (356)
T COG3288 163 SPAKVLVIGAGVAGLAAIATAVRLGAIVTARDLRMFKKEQVES-LGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVAEQ 241 (356)
T ss_pred cchhhhhhhHHHHHHHHHHHHhhcceEEehhhhhhHHhhhhhh-cccccccccccccCCCccccCCHHHHHHHHHHHHHH
Confidence 5677899999999999999999999999999999998888888 886533211110 011222
Q ss_pred CCCcCEEEEcC---CCcc---cHHHHHHHhccCCEEEEeCCCC-CCc--ccChhhHhccCcEEEEeec
Q 018158 246 KRTLDFILDTV---SAKH---SLGPILELLKVNGTLSVVGAPE-APF--ELPSFPLIFGKRSVKGSMT 304 (360)
Q Consensus 246 ~~~~d~vid~~---g~~~---~~~~~~~~l~~~G~~v~~g~~~-~~~--~~~~~~~~~~~~~i~~~~~ 304 (360)
.+++|+||-+. |.+. ....+.+.|++|+.++++.... +.. +.+-.....+++++.|...
T Consensus 242 ~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~n 309 (356)
T COG3288 242 AKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTN 309 (356)
T ss_pred hcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecC
Confidence 68899999876 2221 2478899999999999986543 233 3333445678889988755
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.049 Score=47.35 Aligned_cols=75 Identities=17% Similarity=0.219 Sum_probs=52.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe-E--eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE-F--ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~-~--v~~~~~~~~~~~-------~~~~ 249 (360)
.+++++|+|+ |.+|..++..+...|++|+++++++++.+.+.+.+ +... . .|-.+.+..... ..++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5678999999 99999999999889999999999987765554322 2211 1 233333222111 3469
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|+++++.|.
T Consensus 85 d~lv~~ag~ 93 (241)
T PRK07454 85 DVLINNAGM 93 (241)
T ss_pred CEEEECCCc
Confidence 999999984
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.047 Score=47.69 Aligned_cols=73 Identities=21% Similarity=0.231 Sum_probs=50.5
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc-----CCC-eE--eeCccHHHHHh-------cCCC
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL-----GAD-EF--ILSTNAMQMQA-------GKRT 248 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~-----g~~-~~--v~~~~~~~~~~-------~~~~ 248 (360)
+++++|+|+ |++|..+++.+...|++|+++++++++.+.+...+ +.. ++ .|..+.+.... .-.+
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 468999999 99999888888888999999999988776554322 211 11 24444432211 1357
Q ss_pred cCEEEEcCC
Q 018158 249 LDFILDTVS 257 (360)
Q Consensus 249 ~d~vid~~g 257 (360)
+|++|.+.|
T Consensus 82 id~vi~~ag 90 (248)
T PRK08251 82 LDRVIVNAG 90 (248)
T ss_pred CCEEEECCC
Confidence 999999987
|
|
| >PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.044 Score=49.01 Aligned_cols=96 Identities=18% Similarity=0.175 Sum_probs=72.6
Q ss_pred cccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH
Q 018158 162 PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240 (360)
Q Consensus 162 ~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 240 (360)
..||+..+.+..|+..+--- .|++++|+|- ..+|.=+..++...|++|++..+....+.
T Consensus 137 ~~PcTp~aii~lL~~~~i~l--~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~------------------ 196 (297)
T PRK14186 137 LRSCTPAGVMRLLRSQQIDI--AGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLA------------------ 196 (297)
T ss_pred CCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHH------------------
Confidence 46777777777777665322 7999999999 99999999999999999998875432222
Q ss_pred HHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 241 QMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 241 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
...+..|+++-++|....+. -+++++|..++++|...
T Consensus 197 ---~~~~~ADIvIsAvGkp~~i~--~~~ik~gavVIDvGin~ 233 (297)
T PRK14186 197 ---SITREADILVAAAGRPNLIG--AEMVKPGAVVVDVGIHR 233 (297)
T ss_pred ---HHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEecccc
Confidence 12356899999999875433 47899999999999764
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.032 Score=48.50 Aligned_cols=75 Identities=16% Similarity=0.194 Sum_probs=51.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCe---EeeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADE---FILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~ 249 (360)
.+++++|.|+ |.+|..++..+...|++|+++++++++.+.+.+. .+... ..|..+.+..... ..++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 4678999999 9999999988888999999999988765544332 23221 1233333322221 2479
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|.+.|.
T Consensus 86 d~vi~~ag~ 94 (239)
T PRK07666 86 DILINNAGI 94 (239)
T ss_pred cEEEEcCcc
Confidence 999998874
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.12 Score=44.85 Aligned_cols=99 Identities=15% Similarity=0.110 Sum_probs=61.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHH---cCCC-eE--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPS-KEKEAKEL---LGAD-EF--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~-~~~~~~~~---~g~~-~~--v~~~~~~~~~~~-------~~~ 248 (360)
++++++|+|+ |++|..+++.+...|++|+++.++.. +.+.+.+. .+.. .. .|-.+.+..... -.+
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999 99999999999999999888776533 22222221 3322 11 233333222221 347
Q ss_pred cCEEEEcCCCcc-------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 249 LDFILDTVSAKH-------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 249 ~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+|++|.+.|... ..+.++..++.+|+++.++...
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 142 (245)
T PRK12937 84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSV 142 (245)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecc
Confidence 999999987421 1233445556678998887543
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.053 Score=46.57 Aligned_cols=72 Identities=21% Similarity=0.223 Sum_probs=51.7
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-eEeeCccHHHHHh----c-CCCcCEEEEcCCC
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-EFILSTNAMQMQA----G-KRTLDFILDTVSA 258 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~----~-~~~~d~vid~~g~ 258 (360)
++++|+|+ |.+|..+++.+...|++|++++++.+..+.++. .+.. ...|-.+.+.... . ..++|+++.+.|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA-LGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh-ccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 46899999 999999888887889999999999887777665 5543 2234444333222 1 3469999998874
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.041 Score=48.45 Aligned_cols=75 Identities=13% Similarity=0.084 Sum_probs=49.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHc-CCeEEEEeCChhH-HHHHHHH---cCC-C-eE--eeCccHHHH----Hhc--CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAF-GHHVTVISTSPSK-EKEAKEL---LGA-D-EF--ILSTNAMQM----QAG--KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~-G~~V~~~~~~~~~-~~~~~~~---~g~-~-~~--v~~~~~~~~----~~~--~~ 247 (360)
.+++++|+|+ |++|...++.+... |++|++++++.++ ++.+.+. .+. + ++ .|..+.+.. ... ..
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g 86 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG 86 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence 6789999999 99999988876666 5899999998775 4443222 232 1 22 233333221 111 24
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|+++++.|.
T Consensus 87 ~id~li~~ag~ 97 (253)
T PRK07904 87 DVDVAIVAFGL 97 (253)
T ss_pred CCCEEEEeeec
Confidence 79999988764
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.084 Score=45.90 Aligned_cols=75 Identities=16% Similarity=0.232 Sum_probs=50.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHc---CCCe-E--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVI-STSPSKEKEAKELL---GADE-F--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~-~~~~~~~~~~~~~~---g~~~-~--v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |.+|..++..+...|++|+++ .++.++.+.+...+ +... + .|..+.+..... ..+
T Consensus 4 ~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK05565 4 MGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK 83 (247)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4578999999 999999888888889999998 88877665444322 2211 1 233333322221 237
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|.+.|.
T Consensus 84 id~vi~~ag~ 93 (247)
T PRK05565 84 IDILVNNAGI 93 (247)
T ss_pred CCEEEECCCc
Confidence 9999998874
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.057 Score=48.37 Aligned_cols=88 Identities=24% Similarity=0.252 Sum_probs=60.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc---HH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS---LG 263 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~---~~ 263 (360)
+|.|+|.|.+|...+..++..|.+|+++++++++.+.+++ .|...... .+. +.....|+||.|+..... ++
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~-~g~~~~~~-~~~----~~~~~aDlVilavp~~~~~~~~~ 75 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIE-RGLVDEAS-TDL----SLLKDCDLVILALPIGLLLPPSE 75 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CCCccccc-CCH----hHhcCCCEEEEcCCHHHHHHHHH
Confidence 5789999999998888888889999999999998888887 66421111 111 123578999999875432 23
Q ss_pred HHHHHhccCCEEEEeCC
Q 018158 264 PILELLKVNGTLSVVGA 280 (360)
Q Consensus 264 ~~~~~l~~~G~~v~~g~ 280 (360)
.+...++++..+.+++.
T Consensus 76 ~l~~~l~~~~ii~d~~S 92 (279)
T PRK07417 76 QLIPALPPEAIVTDVGS 92 (279)
T ss_pred HHHHhCCCCcEEEeCcc
Confidence 34444455555555554
|
|
| >PRK13255 thiopurine S-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.063 Score=46.13 Aligned_cols=93 Identities=15% Similarity=0.089 Sum_probs=59.1
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe----------------eCccHHHH-HhcC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI----------------LSTNAMQM-QAGK 246 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v----------------~~~~~~~~-~~~~ 246 (360)
++.+||+.|+| .|.-++-||. .|++|++++.++...+.+.++.+..... ...+.... ....
T Consensus 37 ~~~rvL~~gCG-~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~~~~~ 114 (218)
T PRK13255 37 AGSRVLVPLCG-KSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALTAADL 114 (218)
T ss_pred CCCeEEEeCCC-ChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCCcccC
Confidence 67899999986 3677777775 6999999999999888765434421100 00000000 0112
Q ss_pred CCcCEEEEcCCC--------cccHHHHHHHhccCCEEEEe
Q 018158 247 RTLDFILDTVSA--------KHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 247 ~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~ 278 (360)
..+|.|+|...- ...+..+.++|+++|++..+
T Consensus 115 ~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~ 154 (218)
T PRK13255 115 ADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV 154 (218)
T ss_pred CCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 468999996631 12368889999999875443
|
|
| >PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.048 Score=48.29 Aligned_cols=97 Identities=12% Similarity=0.159 Sum_probs=72.1
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+....+..|+..+--- .|++++|+|. ..+|.=.+.++...|++|++..+....+
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l--~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l------------------ 194 (281)
T PRK14183 135 GFVPCTPLGVMELLEEYEIDV--KGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDL------------------ 194 (281)
T ss_pred CCCCCcHHHHHHHHHHcCCCC--CCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCH------------------
Confidence 356777777777777665323 7999999999 7999999999999999998665332211
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
....+.+|+++-++|....+. -+++++|..++++|...
T Consensus 195 ---~~~~~~ADIvV~AvGkp~~i~--~~~vk~gavvIDvGin~ 232 (281)
T PRK14183 195 ---KAHTKKADIVIVGVGKPNLIT--EDMVKEGAIVIDIGINR 232 (281)
T ss_pred ---HHHHhhCCEEEEecCcccccC--HHHcCCCcEEEEeeccc
Confidence 112357899999999876433 37899999999999654
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.11 Score=45.42 Aligned_cols=71 Identities=18% Similarity=0.177 Sum_probs=47.7
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHcC----CCe----EeeCccHHHHHh-------cCCCcC
Q 018158 188 IGIVGL-GGLGHVAVKFGKAFGHHVTVISTS-PSKEKEAKELLG----ADE----FILSTNAMQMQA-------GKRTLD 250 (360)
Q Consensus 188 vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~-~~~~~~~~~~~g----~~~----~v~~~~~~~~~~-------~~~~~d 250 (360)
++|+|+ |.+|...++.+...|++|++++++ .++.+.+.+.+. ... ..|..+.+.... .-.++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 789998 999999988888889999999987 555555443332 111 124444333221 135689
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
+++.+.|.
T Consensus 82 ~vi~~ag~ 89 (251)
T PRK07069 82 VLVNNAGV 89 (251)
T ss_pred EEEECCCc
Confidence 99999873
|
|
| >COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.41 Score=44.05 Aligned_cols=133 Identities=17% Similarity=0.187 Sum_probs=81.6
Q ss_pred cEEEEEcCChHH-HHHHHHHHHcC--Ce-EEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 186 KRIGIVGLGGLG-HVAVKFGKAFG--HH-VTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 186 ~~vlI~Gag~vG-~~aiqla~~~G--~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
-++.|+|+|.++ ...+..++..+ +. |.++++++++.+.+.+++|.... +.+.+.+-. ...+|+|+.++....+
T Consensus 4 irvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~~~--~~~~~~ll~-~~~iD~V~Iatp~~~H 80 (342)
T COG0673 4 IRVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEFGIAKA--YTDLEELLA-DPDIDAVYIATPNALH 80 (342)
T ss_pred eEEEEEcccHHHHHHhHHHHHhCCCceEEEEEecCCHHHHHHHHHHcCCCcc--cCCHHHHhc-CCCCCEEEEcCCChhh
Confidence 468899997554 55666666654 45 55667888888877777986633 333322221 3459999999999888
Q ss_pred HHHHHHHhccCCEEEEeCCCCCCcccChhh------Hhcc-CcEE-EEeecCCHHHHHHHHHHHhcCCCccc
Q 018158 262 LGPILELLKVNGTLSVVGAPEAPFELPSFP------LIFG-KRSV-KGSMTGGMRETQEMMNVCGKYNITCN 325 (360)
Q Consensus 262 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~------~~~~-~~~i-~~~~~~~~~~~~~~~~~l~~~~l~~~ 325 (360)
...+...|+.|-+ |.+-. ++..+..+ +..+ ++.+ .+....-...++.+-+++.+|.+-.+
T Consensus 81 ~e~~~~AL~aGkh-Vl~EK---Pla~t~~ea~~l~~~a~~~~~~l~v~~~~Rf~p~~~~~k~li~~g~lG~v 148 (342)
T COG0673 81 AELALAALEAGKH-VLCEK---PLALTLEEAEELVELARKAGVKLMVGFNRRFDPAVQALKELIDSGALGEV 148 (342)
T ss_pred HHHHHHHHhcCCE-EEEcC---CCCCCHHHHHHHHHHHHHcCCceeeehhhhcCHHHHHHHHHHhcCCcCce
Confidence 8889888888854 44432 33333321 2222 2222 23333333457777788888877443
|
|
| >PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.052 Score=48.17 Aligned_cols=97 Identities=19% Similarity=0.162 Sum_probs=74.2
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+..+.+..++..+.-- .|++++|+|- ..+|.=++.++...|++|++..+....+.
T Consensus 135 ~~~PcTp~avi~lL~~y~i~l--~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~----------------- 195 (282)
T PRK14166 135 GFLPCTPLGVMKLLKAYEIDL--EGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLS----------------- 195 (282)
T ss_pred CCcCCCHHHHHHHHHHhCCCC--CCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH-----------------
Confidence 457787777777777765323 7999999999 99999999999999999998875442222
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+..+.+|+++-++|....+. -+++++|..++++|...
T Consensus 196 ----~~~~~ADIvIsAvGkp~~i~--~~~vk~GavVIDvGin~ 232 (282)
T PRK14166 196 ----LYTRQADLIIVAAGCVNLLR--SDMVKEGVIVVDVGINR 232 (282)
T ss_pred ----HHHhhCCEEEEcCCCcCccC--HHHcCCCCEEEEecccc
Confidence 12356899999999876443 36899999999999654
|
|
| >PLN02233 ubiquinone biosynthesis methyltransferase | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.075 Score=47.09 Aligned_cols=98 Identities=16% Similarity=0.162 Sum_probs=64.6
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHcC------CC--eEeeCccHHHHHhcCCCcCE
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFG--HHVTVISTSPSKEKEAKELLG------AD--EFILSTNAMQMQAGKRTLDF 251 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G--~~V~~~~~~~~~~~~~~~~~g------~~--~~v~~~~~~~~~~~~~~~d~ 251 (360)
++++++||-+|+|. |..+..+++..+ .+|++++.+++-++.++++.. .+ ..+.. +.....-....+|+
T Consensus 71 ~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~-d~~~lp~~~~sfD~ 148 (261)
T PLN02233 71 AKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEG-DATDLPFDDCYFDA 148 (261)
T ss_pred CCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEc-ccccCCCCCCCEeE
Confidence 34889999999854 556777887765 489999999998888876432 11 11111 11111112356999
Q ss_pred EEEcCCC------cccHHHHHHHhccCCEEEEeCCC
Q 018158 252 ILDTVSA------KHSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 252 vid~~g~------~~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
|+-..+- ...++++.+.|++||+++.+-..
T Consensus 149 V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~ 184 (261)
T PLN02233 149 ITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFN 184 (261)
T ss_pred EEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECC
Confidence 9864431 23478999999999999877543
|
|
| >PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.049 Score=48.36 Aligned_cols=96 Identities=13% Similarity=0.115 Sum_probs=73.3
Q ss_pred cccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH
Q 018158 162 PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240 (360)
Q Consensus 162 ~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 240 (360)
.+||+....+..++..+.-- .|++++|+|. ..+|.=+..++...|++|++..+....+.
T Consensus 136 ~~PcTp~avi~lL~~~~i~l--~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~------------------ 195 (284)
T PRK14170 136 FVPCTPAGIIELIKSTGTQI--EGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLP------------------ 195 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH------------------
Confidence 57788777777777665322 6999999999 99999999999999999998875432211
Q ss_pred HHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 241 QMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 241 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+..+.+|+++-++|....+. -+++++|..++++|...
T Consensus 196 ---~~~~~ADIvI~AvG~~~~i~--~~~vk~GavVIDvGin~ 232 (284)
T PRK14170 196 ---QVAKEADILVVATGLAKFVK--KDYIKPGAIVIDVGMDR 232 (284)
T ss_pred ---HHHhhCCEEEEecCCcCccC--HHHcCCCCEEEEccCcc
Confidence 12356899999999875433 37899999999999764
|
|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.049 Score=54.36 Aligned_cols=93 Identities=20% Similarity=0.175 Sum_probs=69.1
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhc-CCCcCEEEEcCCCcccH
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAG-KRTLDFILDTVSAKHSL 262 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~-~~~~d~vid~~g~~~~~ 262 (360)
.+.++|+|.|.+|+..++.++..|.++++++.++++.+.+++ .|...+ -|..+.+..+.. -.++|.++-++++....
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~-~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~d~~~n 478 (601)
T PRK03659 400 KPQVIIVGFGRFGQVIGRLLMANKMRITVLERDISAVNLMRK-YGYKVYYGDATQLELLRAAGAEKAEAIVITCNEPEDT 478 (601)
T ss_pred cCCEEEecCchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh-CCCeEEEeeCCCHHHHHhcCCccCCEEEEEeCCHHHH
Confidence 367999999999999999999999999999999999999988 885433 355555555555 46899999999886543
Q ss_pred HHHHHH---hccCCEEEEe
Q 018158 263 GPILEL---LKVNGTLSVV 278 (360)
Q Consensus 263 ~~~~~~---l~~~G~~v~~ 278 (360)
..+... ..+.-+++.-
T Consensus 479 ~~i~~~~r~~~p~~~IiaR 497 (601)
T PRK03659 479 MKIVELCQQHFPHLHILAR 497 (601)
T ss_pred HHHHHHHHHHCCCCeEEEE
Confidence 333333 3445555544
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.051 Score=49.57 Aligned_cols=75 Identities=27% Similarity=0.292 Sum_probs=52.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcCC--C--eE--eeCccHHHHHh-------cCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGA--D--EF--ILSTNAMQMQA-------GKRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g~--~--~~--v~~~~~~~~~~-------~~~~ 248 (360)
.+++++|+|+ +++|..+++.+...| ++|++++++.++.+.+.+.++. . .+ .|-.+.+.... ...+
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 81 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP 81 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 3678999999 999999888888889 8999999998877666554431 1 11 24434332211 1357
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|++.|.
T Consensus 82 iD~lI~nAG~ 91 (314)
T TIGR01289 82 LDALVCNAAV 91 (314)
T ss_pred CCEEEECCCc
Confidence 9999998873
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.084 Score=47.97 Aligned_cols=99 Identities=18% Similarity=0.227 Sum_probs=69.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC----CCeE----eeCccHHHH-------HhcCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG----ADEF----ILSTNAMQM-------QAGKR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g----~~~~----v~~~~~~~~-------~~~~~ 247 (360)
.+.+++|+|+ +++|..++..+-..|++|+..+|+.++.+.+++.+. ...+ .|-.+...+ .....
T Consensus 34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~ 113 (314)
T KOG1208|consen 34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEG 113 (314)
T ss_pred CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCC
Confidence 6789999999 999999999999999999999999987776666543 2222 233333222 22366
Q ss_pred CcCEEEEcCCCc-----------------------ccHHHHHHHhccC--CEEEEeCCCC
Q 018158 248 TLDFILDTVSAK-----------------------HSLGPILELLKVN--GTLSVVGAPE 282 (360)
Q Consensus 248 ~~d~vid~~g~~-----------------------~~~~~~~~~l~~~--G~~v~~g~~~ 282 (360)
..|+.|+.+|.. ...+.++..|+.. +|+|.++...
T Consensus 114 ~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~ 173 (314)
T KOG1208|consen 114 PLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSIL 173 (314)
T ss_pred CccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCcc
Confidence 789999988832 1235566666655 7999887644
|
|
| >TIGR00417 speE spermidine synthase | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.13 Score=45.77 Aligned_cols=95 Identities=16% Similarity=0.186 Sum_probs=60.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCC---------CeEeeCccHHHHHhcCCCcCEEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGA---------DEFILSTNAMQMQAGKRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~---------~~~v~~~~~~~~~~~~~~~d~vi 253 (360)
..++||++|+|. |..+..+++.... ++++++.+++-.+.+++.+.. -.++..+.........+.+|+|+
T Consensus 72 ~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~~~~yDvIi 150 (270)
T TIGR00417 72 NPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADTENTFDVII 150 (270)
T ss_pred CCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhCCCCccEEE
Confidence 456999999865 4455666676544 799999998877777774421 11222111222333356899997
Q ss_pred EcCCC----------cccHHHHHHHhccCCEEEEeC
Q 018158 254 DTVSA----------KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 254 d~~g~----------~~~~~~~~~~l~~~G~~v~~g 279 (360)
--... ...++.+.+.|+++|.++...
T Consensus 151 ~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~ 186 (270)
T TIGR00417 151 VDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQS 186 (270)
T ss_pred EeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcC
Confidence 43321 123568889999999998763
|
the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM. |
| >PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.073 Score=46.99 Aligned_cols=92 Identities=27% Similarity=0.383 Sum_probs=62.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC---eEeeCccHHHHH-hcCCCcCEEEEcC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD---EFILSTNAMQMQ-AGKRTLDFILDTV 256 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~-~~~~~~d~vid~~ 256 (360)
++.+||-+|+|. |..+..+++. |.+|++++.+++.++.++++. |.. .++.. +..... .....+|+|+...
T Consensus 44 ~~~~vLDiGcG~-G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~-d~~~l~~~~~~~fD~V~~~~ 120 (255)
T PRK11036 44 RPLRVLDAGGGE-GQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC-AAQDIAQHLETPVDLILFHA 120 (255)
T ss_pred CCCEEEEeCCCc-hHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEc-CHHHHhhhcCCCCCEEEehh
Confidence 567888888853 6777777775 889999999999888877643 321 22222 222221 2346799998543
Q ss_pred C-----C-cccHHHHHHHhccCCEEEEe
Q 018158 257 S-----A-KHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 257 g-----~-~~~~~~~~~~l~~~G~~v~~ 278 (360)
. . ...+..+.+.|++||.++.+
T Consensus 121 vl~~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (255)
T PRK11036 121 VLEWVADPKSVLQTLWSVLRPGGALSLM 148 (255)
T ss_pred HHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence 2 1 23478899999999999765
|
|
| >PRK07402 precorrin-6B methylase; Provisional | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.17 Score=42.61 Aligned_cols=97 Identities=16% Similarity=0.151 Sum_probs=59.3
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHH---cCCCe--EeeCccHHHHHhcCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKEL---LGADE--FILSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~---~g~~~--~v~~~~~~~~~~~~~~~d~vid~ 255 (360)
.+++++||=+|+|. |..++.+++.. +.+|++++.+++..+.++++ ++... ++..+..+........+|.++-.
T Consensus 38 ~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~d~v~~~ 116 (196)
T PRK07402 38 LEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLAPAPDRVCIE 116 (196)
T ss_pred CCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCCCCCCEEEEE
Confidence 34888888888743 55556666554 56899999999887777653 45332 23222222222222334555432
Q ss_pred CCC--cccHHHHHHHhccCCEEEEeC
Q 018158 256 VSA--KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 256 ~g~--~~~~~~~~~~l~~~G~~v~~g 279 (360)
.+. ...+..+.+.|+++|+++...
T Consensus 117 ~~~~~~~~l~~~~~~LkpgG~li~~~ 142 (196)
T PRK07402 117 GGRPIKEILQAVWQYLKPGGRLVATA 142 (196)
T ss_pred CCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 222 245788889999999998774
|
|
| >PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.051 Score=48.50 Aligned_cols=97 Identities=11% Similarity=0.066 Sum_probs=73.9
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+..+.+..|+..+.-- .|++++|+|. ..+|.=+..++...|++|++..+....+.
T Consensus 138 ~~~PcTp~avi~lL~~~~i~l--~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~----------------- 198 (294)
T PRK14187 138 CLIPCTPKGCLYLIKTITRNL--SGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLA----------------- 198 (294)
T ss_pred CccCcCHHHHHHHHHHhCCCC--CCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHH-----------------
Confidence 456777777777777665333 7999999999 99999999999999999998885432221
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+..+.+|+++-++|....+. -+++++|..++++|...
T Consensus 199 ----~~~~~ADIvVsAvGkp~~i~--~~~ik~gaiVIDVGin~ 235 (294)
T PRK14187 199 ----DYCSKADILVAAVGIPNFVK--YSWIKKGAIVIDVGINS 235 (294)
T ss_pred ----HHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEecccc
Confidence 12357899999999875433 37899999999999754
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.1 Score=45.43 Aligned_cols=75 Identities=15% Similarity=0.158 Sum_probs=47.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-ChhHHHH-HHH--HcCCCeE---eeCccHHHHHh-------cCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIST-SPSKEKE-AKE--LLGADEF---ILSTNAMQMQA-------GKRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~-~~~~~~~-~~~--~~g~~~~---v~~~~~~~~~~-------~~~~ 248 (360)
.+++++|+|+ |++|..+++.+...|++|++..+ +..+... +.+ ..+.... .|..+.+.... ...+
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4688999999 99999999999999999887543 3333222 221 1343322 23333322211 1357
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|+++++.|.
T Consensus 82 id~li~~ag~ 91 (246)
T PRK12938 82 IDVLVNNAGI 91 (246)
T ss_pred CCEEEECCCC
Confidence 9999999985
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.06 Score=47.29 Aligned_cols=75 Identities=21% Similarity=0.225 Sum_probs=52.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCe-E--eeCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADE-F--ILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~-~--v~~~~~~~~~~-------~~~~~ 249 (360)
.+++++|+|+ |.+|..++..+...|++|++++++.++.+.+.+. .+... . .|..+.+.... .-.++
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 89 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL 89 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 6889999999 9999999988888899999999998765554332 34221 1 23333322211 13468
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|.+|.+.|.
T Consensus 90 d~vi~~ag~ 98 (256)
T PRK06124 90 DILVNNVGA 98 (256)
T ss_pred CEEEECCCC
Confidence 999999884
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.055 Score=47.20 Aligned_cols=75 Identities=17% Similarity=0.215 Sum_probs=50.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCe-E--eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADE-F--ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~-~--v~~~~~~~~~~~-------~~~~ 249 (360)
.+++++|+|+ |.+|..++..+...|++|++++|+.++...+... .+... + .|-.+.+..... ..++
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 5689999999 9999999988888899999999986654443322 23211 1 233333222221 2479
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (251)
T PRK12826 85 DILVANAGI 93 (251)
T ss_pred CEEEECCCC
Confidence 999999864
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.059 Score=49.41 Aligned_cols=75 Identities=17% Similarity=0.186 Sum_probs=51.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHcCC-C-eE--eeCccHHHHHhcCCCcCEEEEcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFG--HHVTVISTSPSKEKEAKELLGA-D-EF--ILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G--~~V~~~~~~~~~~~~~~~~~g~-~-~~--v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
.++++||+|+ |.+|..+++.+...| .+|++++++..+...+...+.. . .. .|-.+.+.....-.++|+||.++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A 82 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA 82 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence 4788999999 999998888777765 6899998876655444332321 1 11 24444444444445799999988
Q ss_pred CC
Q 018158 257 SA 258 (360)
Q Consensus 257 g~ 258 (360)
|.
T Consensus 83 g~ 84 (324)
T TIGR03589 83 AL 84 (324)
T ss_pred cc
Confidence 74
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.051 Score=47.89 Aligned_cols=74 Identities=15% Similarity=0.141 Sum_probs=49.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCe---EeeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADE---FILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|...++.+...|++|++++++ ++.+.+.+. .+... ..|-.+.+..... ..++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 999999999999999999999987 333333221 34221 1233333322211 3478
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|+++.+.|.
T Consensus 93 d~li~~ag~ 101 (258)
T PRK06935 93 DILVNNAGT 101 (258)
T ss_pred CEEEECCCC
Confidence 999998874
|
|
| >COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.077 Score=49.18 Aligned_cols=132 Identities=14% Similarity=0.106 Sum_probs=81.8
Q ss_pred ccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChh-----------------
Q 018158 157 MDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS----------------- 219 (360)
Q Consensus 157 ~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~----------------- 219 (360)
..+|....+.+.+- .++...+.-- .|.+|.|.|.|.+|..+++.+...|++|++++.+..
T Consensus 182 r~~aTg~Gv~~~~~-~a~~~~g~~l--~G~rVaVQG~GNVg~~aa~~l~~~GAkvva~sds~g~i~~~~Gld~~~l~~~~ 258 (411)
T COG0334 182 RSEATGYGVFYAIR-EALKALGDDL--EGARVAVQGFGNVGQYAAEKLHELGAKVVAVSDSKGGIYDEDGLDVEALLELK 258 (411)
T ss_pred CCcccceehHHHHH-HHHHHcCCCc--CCCEEEEECccHHHHHHHHHHHHcCCEEEEEEcCCCceecCCCCCHHHHHHHh
Confidence 44555566555554 5565555322 799999999999999999999999999999998776
Q ss_pred -HHHHHHHHcCCCeEeeCccH------------------HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCC
Q 018158 220 -KEKEAKELLGADEFILSTNA------------------MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 220 -~~~~~~~~~g~~~~v~~~~~------------------~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 280 (360)
+...+...+|++.+-+..-. +.+. .-+.++|.+.+.++.. .++.+.+...|.++.-..
T Consensus 259 ~~~~~v~~~~ga~~i~~~e~~~~~cDIl~PcA~~n~I~~~na~--~l~ak~V~EgAN~P~t-~eA~~i~~erGIl~~PD~ 335 (411)
T COG0334 259 ERRGSVAEYAGAEYITNEELLEVDCDILIPCALENVITEDNAD--QLKAKIVVEGANGPTT-PEADEILLERGILVVPDI 335 (411)
T ss_pred hhhhhHHhhcCceEccccccccccCcEEcccccccccchhhHH--HhhhcEEEeccCCCCC-HHHHHHHHHCCCEEcChh
Confidence 55566664554433210000 0000 1235577777776644 566666666666654433
Q ss_pred C--CCCcccChhhHhc
Q 018158 281 P--EAPFELPSFPLIF 294 (360)
Q Consensus 281 ~--~~~~~~~~~~~~~ 294 (360)
. .+.+..+...+..
T Consensus 336 laNAGGV~vS~~E~~q 351 (411)
T COG0334 336 LANAGGVIVSYLEWVQ 351 (411)
T ss_pred hccCcCeeeehHHHHh
Confidence 2 2455555555543
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.096 Score=54.91 Aligned_cols=96 Identities=15% Similarity=0.132 Sum_probs=69.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHc-CCe-------------EEEEeCChhHHHHHHHHc-CCC-eEeeCccHHHHHhcCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAF-GHH-------------VTVISTSPSKEKEAKELL-GAD-EFILSTNAMQMQAGKR 247 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~-G~~-------------V~~~~~~~~~~~~~~~~~-g~~-~~v~~~~~~~~~~~~~ 247 (360)
..++|+|+|+|-+|...+..+... +++ |++.+++.++.+.+.+.+ +.+ ..+|..+.+.+...-.
T Consensus 568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~ 647 (1042)
T PLN02819 568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS 647 (1042)
T ss_pred cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence 467999999999999888887654 334 888888888777776645 432 2345666555555445
Q ss_pred CcCEEEEcCCCcccHHHHHHHhccCCEEEEeC
Q 018158 248 TLDFILDTVSAKHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 248 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 279 (360)
++|+|+.|++...+...+..+++.+-+++...
T Consensus 648 ~~DaVIsalP~~~H~~VAkaAieaGkHvv~ek 679 (1042)
T PLN02819 648 QVDVVISLLPASCHAVVAKACIELKKHLVTAS 679 (1042)
T ss_pred CCCEEEECCCchhhHHHHHHHHHcCCCEEECc
Confidence 69999999998766677777777777776554
|
|
| >COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.063 Score=49.02 Aligned_cols=89 Identities=24% Similarity=0.238 Sum_probs=59.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCc----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAK---- 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~---- 259 (360)
.|+++-|+|.|.+|...++.++.+|++|++.++...+. .... .+ +.-.. .+.+.-...|++...+.-.
T Consensus 141 ~gkTvGIiG~G~IG~~va~~l~afgm~v~~~d~~~~~~-~~~~-~~---~~~~~---~Ld~lL~~sDiv~lh~PlT~eT~ 212 (324)
T COG0111 141 AGKTVGIIGLGRIGRAVAKRLKAFGMKVIGYDPYSPRE-RAGV-DG---VVGVD---SLDELLAEADILTLHLPLTPETR 212 (324)
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEECCCCchh-hhcc-cc---ceecc---cHHHHHhhCCEEEEcCCCCcchh
Confidence 38899999999999999999999999999999833221 1111 11 11111 2223345678887766521
Q ss_pred -ccHHHHHHHhccCCEEEEeCC
Q 018158 260 -HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 260 -~~~~~~~~~l~~~G~~v~~g~ 280 (360)
..-.+.+..|+++..+++++.
T Consensus 213 g~i~~~~~a~MK~gailIN~aR 234 (324)
T COG0111 213 GLINAEELAKMKPGAILINAAR 234 (324)
T ss_pred cccCHHHHhhCCCCeEEEECCC
Confidence 112577788998888877754
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.06 Score=47.66 Aligned_cols=75 Identities=16% Similarity=0.133 Sum_probs=52.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe---EeeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE---FILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~ 249 (360)
.+++++|+|+ +++|..++..+...|++|++++++.++.+.+...+ |... ..|-.+.+..... -.++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5789999999 99999988888888999999999887765554322 4321 1233333322221 2568
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|.+.|.
T Consensus 89 d~li~~ag~ 97 (265)
T PRK07097 89 DILVNNAGI 97 (265)
T ss_pred CEEEECCCC
Confidence 999999984
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.11 Score=45.60 Aligned_cols=75 Identities=12% Similarity=0.131 Sum_probs=48.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHc---CCCe-E--eeCccHHHHHhc----------
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVI-STSPSKEKEAKELL---GADE-F--ILSTNAMQMQAG---------- 245 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~-~~~~~~~~~~~~~~---g~~~-~--v~~~~~~~~~~~---------- 245 (360)
.+++++|+|+ |.+|..+++.+...|++|+++ .++.++.+.+...+ +... + .|-.+.+.....
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 4678999999 999999999888889998775 67766554443322 2221 1 243343322111
Q ss_pred ---CCCcCEEEEcCCC
Q 018158 246 ---KRTLDFILDTVSA 258 (360)
Q Consensus 246 ---~~~~d~vid~~g~ 258 (360)
..++|++|.+.|.
T Consensus 85 ~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 85 RVGTSEIDILVNNAGI 100 (254)
T ss_pred ccCCCCccEEEECCCC
Confidence 1469999999874
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.065 Score=49.21 Aligned_cols=90 Identities=17% Similarity=0.187 Sum_probs=64.3
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-----------eEeeCccHHHHHhcCCCcCEEEE
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-----------EFILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-----------~~v~~~~~~~~~~~~~~~d~vid 254 (360)
-+|.|+|+|.+|.+.+..+...|.+|++.++++++.+.+.+ .+.. .+....+ ..+.....|+||-
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~-~~~~~~~~~g~~~~~~~~~~~~---~~e~~~~aD~Vi~ 80 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAALAA-ERENREYLPGVALPAELYPTAD---PEEALAGADFAVV 80 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-hCcccccCCCCcCCCCeEEeCC---HHHHHcCCCEEEE
Confidence 46899999999999999888889999999999887777665 3210 0111111 1222357899999
Q ss_pred cCCCcccHHHHHHHhccCCEEEEeCC
Q 018158 255 TVSAKHSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 255 ~~g~~~~~~~~~~~l~~~G~~v~~g~ 280 (360)
++.... +..+++.++++-.++++..
T Consensus 81 ~v~~~~-~~~v~~~l~~~~~vi~~~~ 105 (328)
T PRK14618 81 AVPSKA-LRETLAGLPRALGYVSCAK 105 (328)
T ss_pred ECchHH-HHHHHHhcCcCCEEEEEee
Confidence 998874 5777788888766666643
|
|
| >PRK08410 2-hydroxyacid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.095 Score=47.70 Aligned_cols=86 Identities=29% Similarity=0.325 Sum_probs=62.8
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCc----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAK---- 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~---- 259 (360)
.|+++.|+|.|.+|...+++++.+|++|++.++..... . .+.. +. .+.+.-...|+|..+....
T Consensus 144 ~gktvGIiG~G~IG~~vA~~~~~fgm~V~~~d~~~~~~----~-~~~~----~~---~l~ell~~sDvv~lh~Plt~~T~ 211 (311)
T PRK08410 144 KGKKWGIIGLGTIGKRVAKIAQAFGAKVVYYSTSGKNK----N-EEYE----RV---SLEELLKTSDIISIHAPLNEKTK 211 (311)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhcCCEEEEECCCcccc----c-cCce----ee---cHHHHhhcCCEEEEeCCCCchhh
Confidence 68999999999999999999999999999999753211 1 1111 11 2334456789998877632
Q ss_pred -ccHHHHHHHhccCCEEEEeCCC
Q 018158 260 -HSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 260 -~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
..-.+.++.|+++..+++++.-
T Consensus 212 ~li~~~~~~~Mk~~a~lIN~aRG 234 (311)
T PRK08410 212 NLIAYKELKLLKDGAILINVGRG 234 (311)
T ss_pred cccCHHHHHhCCCCeEEEECCCc
Confidence 1236888999999999999753
|
|
| >PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities [] | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.018 Score=50.01 Aligned_cols=99 Identities=18% Similarity=0.270 Sum_probs=61.5
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHcC---CCeE-eeCccHHHHHhcCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFG--HHVTVISTSPSKEKEAKELLG---ADEF-ILSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G--~~V~~~~~~~~~~~~~~~~~g---~~~~-v~~~~~~~~~~~~~~~d~vid~ 255 (360)
.++|++||=+|+|+ |..+..+++..+ .+|++++-+++-++.++++.. ...+ ....+.+...-....+|+|..+
T Consensus 45 ~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~lp~~d~sfD~v~~~ 123 (233)
T PF01209_consen 45 LRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDLPFPDNSFDAVTCS 123 (233)
T ss_dssp --S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB--S-TT-EEEEEEE
T ss_pred CCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHhcCCCCceeEEEHH
Confidence 34889999988864 778888888876 489999999998888887632 2211 1111222222224679999987
Q ss_pred CCC------cccHHHHHHHhccCCEEEEeCCC
Q 018158 256 VSA------KHSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 256 ~g~------~~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
.|- ...+.++.+.|+|||+++.+...
T Consensus 124 fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~ 155 (233)
T PF01209_consen 124 FGLRNFPDRERALREMYRVLKPGGRLVILEFS 155 (233)
T ss_dssp S-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hhHHhhCCHHHHHHHHHHHcCCCeEEEEeecc
Confidence 763 23578999999999999877543
|
Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C. |
| >PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.058 Score=47.96 Aligned_cols=97 Identities=20% Similarity=0.198 Sum_probs=72.8
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHH----cCCeEEEEeCChhHHHHHHHHcCCCeEee
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKA----FGHHVTVISTSPSKEKEAKELLGADEFIL 235 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~----~G~~V~~~~~~~~~~~~~~~~~g~~~~v~ 235 (360)
..+||+....+..|+..+--- .|++++|+|- ..+|.=+..++.. .+++|+........+..
T Consensus 135 ~~~PcTp~av~~lL~~~~i~l--~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~------------ 200 (286)
T PRK14184 135 GFRPCTPAGVMTLLERYGLSP--AGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAE------------ 200 (286)
T ss_pred CCCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHH------------
Confidence 356787777777777765333 7999999999 9999988888887 78999988855432222
Q ss_pred CccHHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 236 STNAMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 236 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.-+..|+++-++|.+..+. -+++++|..++++|...
T Consensus 201 ---------~~~~ADIVI~AvG~p~li~--~~~vk~GavVIDVGi~~ 236 (286)
T PRK14184 201 ---------ECREADFLFVAIGRPRFVT--ADMVKPGAVVVDVGINR 236 (286)
T ss_pred ---------HHHhCCEEEEecCCCCcCC--HHHcCCCCEEEEeeeec
Confidence 2346899999999876543 36779999999998654
|
|
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.18 Score=44.98 Aligned_cols=89 Identities=21% Similarity=0.271 Sum_probs=66.3
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhH-HHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHHH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSK-EKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPI 265 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~-~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 265 (360)
+|-++|.|.+|.-.++-+...|.+|++.++++++ .+.++. .|+...-+. .+.....|+||-++++......+
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~-~Ga~~a~s~------~eaa~~aDvVitmv~~~~~V~~V 74 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAA-AGATVAASP------AEAAAEADVVITMLPDDAAVRAV 74 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHH-cCCcccCCH------HHHHHhCCEEEEecCCHHHHHHH
Confidence 5778899999999999899999999999999998 666666 787544222 22356799999999877554444
Q ss_pred H-------HHhccCCEEEEeCCCC
Q 018158 266 L-------ELLKVNGTLSVVGAPE 282 (360)
Q Consensus 266 ~-------~~l~~~G~~v~~g~~~ 282 (360)
+ ..++++..+++....+
T Consensus 75 ~~g~~g~~~~~~~G~i~IDmSTis 98 (286)
T COG2084 75 LFGENGLLEGLKPGAIVIDMSTIS 98 (286)
T ss_pred HhCccchhhcCCCCCEEEECCCCC
Confidence 3 3445777777776544
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.095 Score=44.49 Aligned_cols=34 Identities=24% Similarity=0.460 Sum_probs=30.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTS 217 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~ 217 (360)
.+.+|+|+|+|++|..+++.+...|. ++++++.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 46789999999999999999999998 79999876
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.041 Score=50.36 Aligned_cols=75 Identities=19% Similarity=0.221 Sum_probs=50.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CC--C-eE--eeCccHHHHHhcCCCcCEEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GA--D-EF--ILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~--~-~~--v~~~~~~~~~~~~~~~d~vid 254 (360)
.++++||+|+ |.+|..++..+...|++|+++.++.++.......+ +. . .. .|..+.+.....-.++|+||.
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih 83 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH 83 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence 6789999999 99999999999889999998887765433322211 11 1 11 233444344444457999999
Q ss_pred cCCC
Q 018158 255 TVSA 258 (360)
Q Consensus 255 ~~g~ 258 (360)
+++.
T Consensus 84 ~A~~ 87 (325)
T PLN02989 84 TASP 87 (325)
T ss_pred eCCC
Confidence 9873
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.037 Score=49.08 Aligned_cols=72 Identities=18% Similarity=0.235 Sum_probs=49.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe-EeeCccHHHHHhc-------CCCcCEEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE-FILSTNAMQMQAG-------KRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~-------~~~~d~vid 254 (360)
.+++++|+|+ |++|..+++.+...|++|++++++.++.+.. .+... ..|..+.+..... ...+|++|+
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc---CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 4578999999 9999999988888899999999987654321 12221 2244444333222 346899999
Q ss_pred cCCC
Q 018158 255 TVSA 258 (360)
Q Consensus 255 ~~g~ 258 (360)
+.|.
T Consensus 80 ~ag~ 83 (270)
T PRK06179 80 NAGV 83 (270)
T ss_pred CCCC
Confidence 9984
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.12 Score=51.25 Aligned_cols=75 Identities=19% Similarity=0.214 Sum_probs=52.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.+.++||+|+ |++|...++.+...|++|++++++.++.+.+.+. .|.... .|-.+.+..... ..++
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999999 9999999888888999999999998776655432 243211 244443322221 3569
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|+++|.
T Consensus 394 d~lv~~Ag~ 402 (582)
T PRK05855 394 DIVVNNAGI 402 (582)
T ss_pred cEEEECCcc
Confidence 999999984
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.082 Score=46.63 Aligned_cols=75 Identities=21% Similarity=0.298 Sum_probs=50.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH--cCCCe---EeeCccHHHHHhc-------CCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL--LGADE---FILSTNAMQMQAG-------KRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~--~g~~~---~v~~~~~~~~~~~-------~~~~d 250 (360)
.+++++|+|+ |++|..+++.+...|++|++++++.+..+.+.+. .+... ..|..+.+..... ...+|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999999 9999999998888999999999887533333221 23221 1233333222221 35689
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|.+.|.
T Consensus 85 ~vi~~ag~ 92 (263)
T PRK08226 85 ILVNNAGV 92 (263)
T ss_pred EEEECCCc
Confidence 99998883
|
|
| >PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1 | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.04 Score=44.24 Aligned_cols=89 Identities=28% Similarity=0.334 Sum_probs=56.7
Q ss_pred EEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-------eeCccH-HHHHhcCCCcCEEEEcCCCc
Q 018158 188 IGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-------ILSTNA-MQMQAGKRTLDFILDTVSAK 259 (360)
Q Consensus 188 vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-------v~~~~~-~~~~~~~~~~d~vid~~g~~ 259 (360)
|+|+|+|.+|...+..++..|.+|..+.+.+ +.+.+++ -|..-. +..... .........+|++|-|+=..
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa~ 78 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKE-QGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVKAY 78 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHH-HCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SSGG
T ss_pred CEEECcCHHHHHHHHHHHHCCCceEEEEccc-cHHhhhh-eeEEEEecccceecccccccCcchhccCCCcEEEEEeccc
Confidence 6899999999998888888999999999888 7777766 452111 111000 00112357899999998554
Q ss_pred ccHHHHHHHhc----cCCEEEEeC
Q 018158 260 HSLGPILELLK----VNGTLSVVG 279 (360)
Q Consensus 260 ~~~~~~~~~l~----~~G~~v~~g 279 (360)
. ...+++.++ ++..++.+.
T Consensus 79 ~-~~~~l~~l~~~~~~~t~iv~~q 101 (151)
T PF02558_consen 79 Q-LEQALQSLKPYLDPNTTIVSLQ 101 (151)
T ss_dssp G-HHHHHHHHCTGEETTEEEEEES
T ss_pred c-hHHHHHHHhhccCCCcEEEEEe
Confidence 3 344444444 455666653
|
1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B .... |
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.084 Score=47.68 Aligned_cols=87 Identities=18% Similarity=0.218 Sum_probs=62.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc--
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS-- 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~-- 261 (360)
.|++|.|+|.|.+|.+.++.++..|.+|++..+.....+.+.. .|.. +. ...+.-...|+|+-+......
T Consensus 15 kgKtVGIIG~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~-~G~~-v~------sl~Eaak~ADVV~llLPd~~t~~ 86 (335)
T PRK13403 15 QGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKA-DGFE-VM------SVSEAVRTAQVVQMLLPDEQQAH 86 (335)
T ss_pred CcCEEEEEeEcHHHHHHHHHHHHCcCEEEEEECcchhhHHHHH-cCCE-EC------CHHHHHhcCCEEEEeCCChHHHH
Confidence 6899999999999999999999999999998766554455555 6653 21 223445678999998875432
Q ss_pred -H-HHHHHHhccCCEEEEe
Q 018158 262 -L-GPILELLKVNGTLSVV 278 (360)
Q Consensus 262 -~-~~~~~~l~~~G~~v~~ 278 (360)
+ ...+..|+++..++..
T Consensus 87 V~~~eil~~MK~GaiL~f~ 105 (335)
T PRK13403 87 VYKAEVEENLREGQMLLFS 105 (335)
T ss_pred HHHHHHHhcCCCCCEEEEC
Confidence 2 3466777887655444
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.063 Score=47.18 Aligned_cols=75 Identities=17% Similarity=0.184 Sum_probs=52.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCe---EeeCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADE---FILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~-------~~~~~ 249 (360)
.+++++|+|+ |++|..++..+...|++|++++++.++.+.+.+. .+.+. ..|..+.+.... ...++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4799999999 9999999998888999999999888776554332 23221 134444433222 13578
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|+++.+.|.
T Consensus 90 d~li~~ag~ 98 (255)
T PRK06113 90 DILVNNAGG 98 (255)
T ss_pred CEEEECCCC
Confidence 999999874
|
|
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.089 Score=47.62 Aligned_cols=89 Identities=21% Similarity=0.203 Sum_probs=58.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe---EeeC--ccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE---FILS--TNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---~v~~--~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
++.|+|+|.+|.+.+..+...|.+|+.+++++++.+.+++ .|... .... ......... ..+|++|-|+....
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila~k~~~- 78 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGHDVTLVARRGAHLDALNE-NGLRLEDGEITVPVLAADDPAEL-GPQDLVILAVKAYQ- 78 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECChHHHHHHHH-cCCcccCCceeecccCCCChhHc-CCCCEEEEeccccc-
Confidence 5889999999998888888889999999998888777776 45321 0000 000111222 67999999987653
Q ss_pred HHHHHHHhc----cCCEEEEe
Q 018158 262 LGPILELLK----VNGTLSVV 278 (360)
Q Consensus 262 ~~~~~~~l~----~~G~~v~~ 278 (360)
+..++..++ ++..++.+
T Consensus 79 ~~~~~~~l~~~l~~~~~iv~~ 99 (304)
T PRK06522 79 LPAALPSLAPLLGPDTPVLFL 99 (304)
T ss_pred HHHHHHHHhhhcCCCCEEEEe
Confidence 344444444 34456554
|
|
| >PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.068 Score=47.69 Aligned_cols=97 Identities=13% Similarity=0.129 Sum_probs=72.4
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHc----CCeEEEEeCChhHHHHHHHHcCCCeEee
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAF----GHHVTVISTSPSKEKEAKELLGADEFIL 235 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~----G~~V~~~~~~~~~~~~~~~~~g~~~~v~ 235 (360)
..+||+....+..|+..+--- .|++++|+|- ..+|.=+..++... +++|++..+....+.
T Consensus 135 ~~~PcTp~av~~lL~~~~i~l--~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~nl~------------- 199 (293)
T PRK14185 135 CFVSATPNGILELLKRYHIET--SGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRSKNLK------------- 199 (293)
T ss_pred CCCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCCCCHH-------------
Confidence 356777777777777665322 7999999999 99999888888877 688888764432221
Q ss_pred CccHHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 236 STNAMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 236 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
...+.+|+++-++|....+. -+++++|..++++|...
T Consensus 200 --------~~~~~ADIvIsAvGkp~~i~--~~~vk~gavVIDvGin~ 236 (293)
T PRK14185 200 --------KECLEADIIIAALGQPEFVK--ADMVKEGAVVIDVGTTR 236 (293)
T ss_pred --------HHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEecCcc
Confidence 12356899999999876543 38999999999999754
|
|
| >PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.061 Score=47.83 Aligned_cols=97 Identities=13% Similarity=0.148 Sum_probs=72.9
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+....+..++..+--- .|++++|+|- ..+|.=+..++...|++|++..+....+
T Consensus 137 ~~~PcTp~av~~lL~~y~i~l--~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L------------------ 196 (288)
T PRK14171 137 GFIPCTALGCLAVIKKYEPNL--TGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNL------------------ 196 (288)
T ss_pred CCcCCCHHHHHHHHHHhCCCC--CCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCH------------------
Confidence 356777777777777665323 7999999999 9999999999999999999877443221
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.+..+.+|+++-++|....+. -+++++|..++++|...
T Consensus 197 ---~~~~~~ADIvV~AvGkp~~i~--~~~vk~GavVIDvGin~ 234 (288)
T PRK14171 197 ---SSITSKADIVVAAIGSPLKLT--AEYFNPESIVIDVGINR 234 (288)
T ss_pred ---HHHHhhCCEEEEccCCCCccC--HHHcCCCCEEEEeeccc
Confidence 122356899999999775333 37899999999999654
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.065 Score=48.14 Aligned_cols=75 Identities=16% Similarity=0.137 Sum_probs=49.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCh---------hHHHHHHHH---cCCCeE---eeCccHHHHHh---
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSP---------SKEKEAKEL---LGADEF---ILSTNAMQMQA--- 244 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~---------~~~~~~~~~---~g~~~~---v~~~~~~~~~~--- 244 (360)
.++++||+|+ +++|.++++.+...|++|++++++. ++.+.+.+. .|.... .|-.+.+....
T Consensus 5 ~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~ 84 (286)
T PRK07791 5 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVD 84 (286)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence 6889999999 9999999988888999999988654 443333322 232211 23333322211
Q ss_pred ----cCCCcCEEEEcCCC
Q 018158 245 ----GKRTLDFILDTVSA 258 (360)
Q Consensus 245 ----~~~~~d~vid~~g~ 258 (360)
...++|++|++.|.
T Consensus 85 ~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 85 AAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHhcCCCCEEEECCCC
Confidence 13579999999874
|
|
| >PRK01683 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.12 Score=45.54 Aligned_cols=95 Identities=22% Similarity=0.267 Sum_probs=65.3
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCC--
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSA-- 258 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~-- 258 (360)
++++++||=+|+|. |..+..+++.. +.+|++++.+++..+.+++++....++..+-. .. .....+|+|+....-
T Consensus 29 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d~~-~~-~~~~~fD~v~~~~~l~~ 105 (258)
T PRK01683 29 LENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEADIA-SW-QPPQALDLIFANASLQW 105 (258)
T ss_pred CcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECchh-cc-CCCCCccEEEEccChhh
Confidence 34789999999853 66677777776 56899999999988888875542233322211 11 123579999865441
Q ss_pred ----cccHHHHHHHhccCCEEEEeC
Q 018158 259 ----KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 259 ----~~~~~~~~~~l~~~G~~v~~g 279 (360)
...+..+.+.|++||.++...
T Consensus 106 ~~d~~~~l~~~~~~LkpgG~~~~~~ 130 (258)
T PRK01683 106 LPDHLELFPRLVSLLAPGGVLAVQM 130 (258)
T ss_pred CCCHHHHHHHHHHhcCCCcEEEEEC
Confidence 234788999999999998753
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.066 Score=47.04 Aligned_cols=75 Identities=15% Similarity=0.122 Sum_probs=49.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHH---cCCCe-E--eeCccHHHHHh-------cCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPS-KEKEAKEL---LGADE-F--ILSTNAMQMQA-------GKRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~-~~~~~~~~---~g~~~-~--v~~~~~~~~~~-------~~~~ 248 (360)
.++++||+|+ +++|.++++.+...|++|++++++.+ ..+.+.+. .+... . .|-.+.+.... ...+
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999 99999999999999999999998653 22222221 34221 1 23333322221 1356
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|++.|.
T Consensus 87 id~li~~ag~ 96 (254)
T PRK06114 87 LTLAVNAAGI 96 (254)
T ss_pred CCEEEECCCC
Confidence 8999999984
|
|
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.064 Score=52.57 Aligned_cols=94 Identities=17% Similarity=0.110 Sum_probs=61.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc--
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS-- 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~-- 261 (360)
.+++++|+|+|++|.+++..+...|++|+++.++.++.+.+.+.++.. .+...+.. .......|++++|++....
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~-~~~~~~~~--~~~~~~~diiINtT~vGm~~~ 454 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQ-ALTLADLE--NFHPEEGMILANTTSVGMQPN 454 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCc-eeeHhHhh--hhccccCeEEEecccCCCCCC
Confidence 468999999999999999999999999999999988887777656532 22222111 1112357899998864311
Q ss_pred ---HHHHHHHhccCCEEEEeCC
Q 018158 262 ---LGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 262 ---~~~~~~~l~~~G~~v~~g~ 280 (360)
..--...+++.+.+.++-.
T Consensus 455 ~~~~pl~~~~l~~~~~v~D~vY 476 (529)
T PLN02520 455 VDETPISKHALKHYSLVFDAVY 476 (529)
T ss_pred CCCCcccHhhCCCCCEEEEecc
Confidence 0111244555555555533
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.054 Score=50.17 Aligned_cols=75 Identities=17% Similarity=0.197 Sum_probs=50.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC--C--C-eEeeCccHHHHHhc--CCCcCEEEEc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG--A--D-EFILSTNAMQMQAG--KRTLDFILDT 255 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g--~--~-~~v~~~~~~~~~~~--~~~~d~vid~ 255 (360)
.++++||+|+ |.+|..+++.+...|.+|++++++..........++ . . ...|-.+.+..... ..++|+||.+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence 4789999999 999999999999999999999987654332221122 1 1 11233343333333 2368999999
Q ss_pred CCC
Q 018158 256 VSA 258 (360)
Q Consensus 256 ~g~ 258 (360)
++.
T Consensus 83 A~~ 85 (349)
T TIGR02622 83 AAQ 85 (349)
T ss_pred Ccc
Confidence 873
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.076 Score=46.39 Aligned_cols=42 Identities=19% Similarity=0.242 Sum_probs=36.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHH
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAK 225 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~ 225 (360)
++++++|+|+ |.+|...++.+...|++|++++++.++.+.+.
T Consensus 11 ~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~ 53 (247)
T PRK08945 11 KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVY 53 (247)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHH
Confidence 7899999999 99999988888888999999999987655443
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.1 Score=42.41 Aligned_cols=73 Identities=21% Similarity=0.218 Sum_probs=47.0
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCC-eEEEEeCC--hhHHHHHHHH---cCCCeE---eeCccHHHHHh-------cCCC
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGH-HVTVISTS--PSKEKEAKEL---LGADEF---ILSTNAMQMQA-------GKRT 248 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~-~V~~~~~~--~~~~~~~~~~---~g~~~~---v~~~~~~~~~~-------~~~~ 248 (360)
+++||+|+ +++|...++.+-..|. +|+.+.++ .++.+.+.++ .+..-. .|..+.+..+. ....
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 57899999 9999988777777776 68888888 4544444332 342211 13333322222 2567
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999999884
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.073 Score=47.22 Aligned_cols=96 Identities=15% Similarity=0.136 Sum_probs=72.6
Q ss_pred cccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH
Q 018158 162 PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240 (360)
Q Consensus 162 ~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 240 (360)
.+||+....+..++..+--- .|++++|+|- ..+|.=+..++...+++|++..+....+.
T Consensus 136 ~~PcTp~avi~ll~~~~i~l--~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~------------------ 195 (282)
T PRK14182 136 PRPCTPAGVMRMLDEARVDP--KGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLA------------------ 195 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH------------------
Confidence 46777777777777665322 7999999999 99999999999999999998865432211
Q ss_pred HHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 241 QMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 241 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
...+.+|+++-++|....+. -+++++|..++++|...
T Consensus 196 ---~~~~~ADIvI~AvGk~~~i~--~~~ik~gaiVIDvGin~ 232 (282)
T PRK14182 196 ---GEVGRADILVAAIGKAELVK--GAWVKEGAVVIDVGMNR 232 (282)
T ss_pred ---HHHhhCCEEEEecCCcCccC--HHHcCCCCEEEEeecee
Confidence 12356899999999765333 37899999999999754
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.11 Score=46.23 Aligned_cols=75 Identities=13% Similarity=0.150 Sum_probs=51.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
+.++++|+|+ |.+|..+++.+...|++|++++++.++.+.+... .+.... .|..+.+..... ..++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 4578999999 9999999988888899999999887765544332 233221 243333332211 2468
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|.+.|.
T Consensus 89 d~vi~~Ag~ 97 (274)
T PRK07775 89 EVLVSGAGD 97 (274)
T ss_pred CEEEECCCc
Confidence 999999874
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.24 Score=43.24 Aligned_cols=98 Identities=12% Similarity=0.118 Sum_probs=60.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC-hhHHH----HHHHHcCCCe-E--eeCccHHHHHh-------cCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTS-PSKEK----EAKELLGADE-F--ILSTNAMQMQA-------GKR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~-~~~~~----~~~~~~g~~~-~--v~~~~~~~~~~-------~~~ 247 (360)
.++++||+|+ |.+|...++.+...|++|+++.++ .++.. .+++ .+... . .|..+.+.... .-.
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKE-NGGEGIGVLADVSTREGCETLAKATIDRYG 83 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHH-cCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence 4688999999 999999988888899998776643 23222 2222 33321 1 23333322211 135
Q ss_pred CcCEEEEcCCCcc-------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 248 TLDFILDTVSAKH-------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 248 ~~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
++|++|.+.|... ..+.+...++..|+++.++...
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~ 143 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVA 143 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchh
Confidence 7899999998410 1234455666778999887654
|
|
| >PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.065 Score=48.71 Aligned_cols=97 Identities=12% Similarity=0.090 Sum_probs=73.7
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+.......|++.+.-- .|++++|+|- ..+|.=+..++...|++|++..+....+
T Consensus 192 ~~~PCTp~avi~LL~~~~i~l--~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl------------------ 251 (345)
T PLN02897 192 LFVSCTPKGCVELLIRSGVEI--AGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDP------------------ 251 (345)
T ss_pred CCcCCCHHHHHHHHHHhCCCC--CCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCH------------------
Confidence 456777777777777665323 7999999999 9999999999999999998887543221
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
....+..|+++-++|....+. -+++++|..++++|...
T Consensus 252 ---~~~~~~ADIvIsAvGkp~~v~--~d~vk~GavVIDVGin~ 289 (345)
T PLN02897 252 ---EQITRKADIVIAAAGIPNLVR--GSWLKPGAVVIDVGTTP 289 (345)
T ss_pred ---HHHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEccccc
Confidence 122457899999999875433 47899999999999754
|
|
| >PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.068 Score=43.05 Aligned_cols=87 Identities=22% Similarity=0.221 Sum_probs=56.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc--
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS-KEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH-- 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~-~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~-- 260 (360)
++++|.|+|.|..|.+.++-+|..|.+|++..+... ..+.+++ -|.+. . ...+.-+..|+|+-.+.+..
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~-~Gf~v-~------~~~eAv~~aDvV~~L~PD~~q~ 74 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKA-DGFEV-M------SVAEAVKKADVVMLLLPDEVQP 74 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHH-TT-EC-C------EHHHHHHC-SEEEE-S-HHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHH-CCCee-c------cHHHHHhhCCEEEEeCChHHHH
Confidence 589999999999999999999999999998888777 6777777 77431 1 12233457999999887652
Q ss_pred -cH-HHHHHHhccCCEEEEe
Q 018158 261 -SL-GPILELLKVNGTLSVV 278 (360)
Q Consensus 261 -~~-~~~~~~l~~~G~~v~~ 278 (360)
.+ +++...|+++-.+++.
T Consensus 75 ~vy~~~I~p~l~~G~~L~fa 94 (165)
T PF07991_consen 75 EVYEEEIAPNLKPGATLVFA 94 (165)
T ss_dssp HHHHHHHHHHS-TT-EEEES
T ss_pred HHHHHHHHhhCCCCCEEEeC
Confidence 23 4455677777666544
|
This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C. |
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.068 Score=48.93 Aligned_cols=93 Identities=18% Similarity=0.289 Sum_probs=65.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHH-cCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKA-FGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH 260 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~-~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~ 260 (360)
.+++++|+|+ |.+|..+++.+.. .|. +++++.++.+++..+...++...+. .....-.+.|+|+.+++...
T Consensus 154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~------~l~~~l~~aDiVv~~ts~~~ 227 (340)
T PRK14982 154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL------SLEEALPEADIVVWVASMPK 227 (340)
T ss_pred CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH------hHHHHHccCCEEEECCcCCc
Confidence 6789999999 9999988887764 465 7999999988887776655422221 12233457999999998754
Q ss_pred cHHHHHHHhccCCEEEEeCCCC
Q 018158 261 SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 261 ~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.+..-...+++.-.+++++.+.
T Consensus 228 ~~~I~~~~l~~~~~viDiAvPR 249 (340)
T PRK14982 228 GVEIDPETLKKPCLMIDGGYPK 249 (340)
T ss_pred CCcCCHHHhCCCeEEEEecCCC
Confidence 3211224567777888888765
|
|
| >COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.056 Score=48.91 Aligned_cols=91 Identities=22% Similarity=0.280 Sum_probs=68.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL- 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~- 262 (360)
+|+.++|.|-|-+|.-.++.++.+|++|+++.-++-+.-++.- =|. .+. ...++....|+++-|+|+...+
T Consensus 208 aGK~vVV~GYG~vGrG~A~~~rg~GA~ViVtEvDPI~AleA~M-dGf-~V~------~m~~Aa~~gDifiT~TGnkdVi~ 279 (420)
T COG0499 208 AGKNVVVAGYGWVGRGIAMRLRGMGARVIVTEVDPIRALEAAM-DGF-RVM------TMEEAAKTGDIFVTATGNKDVIR 279 (420)
T ss_pred cCceEEEecccccchHHHHHhhcCCCeEEEEecCchHHHHHhh-cCc-EEE------EhHHhhhcCCEEEEccCCcCccC
Confidence 8999999999999999999999999999999988865433322 232 222 1223345569999999987654
Q ss_pred HHHHHHhccCCEEEEeCCCC
Q 018158 263 GPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~~~ 282 (360)
..-+..|+++..+...|-..
T Consensus 280 ~eh~~~MkDgaIl~N~GHFd 299 (420)
T COG0499 280 KEHFEKMKDGAILANAGHFD 299 (420)
T ss_pred HHHHHhccCCeEEecccccc
Confidence 46678899998888888544
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.13 Score=44.43 Aligned_cols=69 Identities=19% Similarity=0.211 Sum_probs=47.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-eEeeCccHHHHHhc------CCCcCEEEEc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-EFILSTNAMQMQAG------KRTLDFILDT 255 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~------~~~~d~vid~ 255 (360)
.+++++|+|+ |.+|..+++.+...|++|++++++.++ . +..+ ...|..+.+..... ..+.|++|.+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-----~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ 75 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----D-FPGELFACDLADIEQTAATLAQINEIHPVDAIVNN 75 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-----c-cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEEC
Confidence 4678999999 999999999999999999999987654 1 2211 22344443322211 2368999998
Q ss_pred CCC
Q 018158 256 VSA 258 (360)
Q Consensus 256 ~g~ 258 (360)
.|.
T Consensus 76 ag~ 78 (234)
T PRK07577 76 VGI 78 (234)
T ss_pred CCC
Confidence 874
|
|
| >PLN02244 tocopherol O-methyltransferase | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.092 Score=48.49 Aligned_cols=96 Identities=21% Similarity=0.306 Sum_probs=63.3
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCC-eE-eeCccHHHHHhcCCCcCEEEEcCC
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGAD-EF-ILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~-~~-v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
+++++||=+|+|. |..+..+++..|++|++++.++...+.++++ .|.. .+ +...+.....-....+|+|+....
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~~~~~~~FD~V~s~~~ 195 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQPFEDGQFDLVWSMES 195 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccCCCCCCCccEEEECCc
Confidence 3788999999864 6677788887899999999999877766553 2321 11 111111111112457999986433
Q ss_pred C------cccHHHHHHHhccCCEEEEeC
Q 018158 258 A------KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 258 ~------~~~~~~~~~~l~~~G~~v~~g 279 (360)
. ...+.++.+.|++||+++...
T Consensus 196 ~~h~~d~~~~l~e~~rvLkpGG~lvi~~ 223 (340)
T PLN02244 196 GEHMPDKRKFVQELARVAAPGGRIIIVT 223 (340)
T ss_pred hhccCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 1 134678899999999998764
|
|
| >PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.071 Score=47.68 Aligned_cols=97 Identities=14% Similarity=0.120 Sum_probs=71.8
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHc----CCeEEEEeCChhHHHHHHHHcCCCeEee
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAF----GHHVTVISTSPSKEKEAKELLGADEFIL 235 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~----G~~V~~~~~~~~~~~~~~~~~g~~~~v~ 235 (360)
...||+..+.+..|+..+--- .|++++|+|. ..+|.=++.++... +++|++..+....+
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l--~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~~l-------------- 198 (297)
T PRK14167 135 RFKPCTPHGIQKLLAAAGVDT--EGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRTDDL-------------- 198 (297)
T ss_pred CCCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCCCCH--------------
Confidence 356777777777777665323 7999999999 99999888888877 78898865433211
Q ss_pred CccHHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 236 STNAMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 236 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
....+.+|+++-++|....+.. +++++|..++++|...
T Consensus 199 -------~~~~~~ADIvIsAvGkp~~i~~--~~ik~gaiVIDvGin~ 236 (297)
T PRK14167 199 -------AAKTRRADIVVAAAGVPELIDG--SMLSEGATVIDVGINR 236 (297)
T ss_pred -------HHHHhhCCEEEEccCCcCccCH--HHcCCCCEEEEccccc
Confidence 1123578999999998764432 7899999999999654
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.052 Score=49.60 Aligned_cols=74 Identities=20% Similarity=0.219 Sum_probs=49.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CC--C-eEe--eCccHHHHHhcCCCcCEEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GA--D-EFI--LSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~--~-~~v--~~~~~~~~~~~~~~~d~vid 254 (360)
.|++++|+|+ |.+|..++..+...|.+|+++.++.++.+.+...+ +. . ..+ |..+...+...-.++|+||.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 6789999999 99999999988888999998888765443332211 11 1 111 33333333444457999999
Q ss_pred cCC
Q 018158 255 TVS 257 (360)
Q Consensus 255 ~~g 257 (360)
+++
T Consensus 84 ~A~ 86 (322)
T PLN02986 84 TAS 86 (322)
T ss_pred eCC
Confidence 886
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.074 Score=46.82 Aligned_cols=74 Identities=15% Similarity=0.086 Sum_probs=50.1
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH----cCCCeE----eeCccHHHHHhc-------CCC
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL----LGADEF----ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~----~g~~~~----v~~~~~~~~~~~-------~~~ 248 (360)
++++||+|+ |.+|..++..+...|++|++++++.++.+.+.+. .+...+ .|..+.+..... -.+
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999999 9999999998888899999999987765544332 231111 133333222211 257
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|+++++.|.
T Consensus 82 id~vv~~ag~ 91 (259)
T PRK12384 82 VDLLVYNAGI 91 (259)
T ss_pred CCEEEECCCc
Confidence 8999999873
|
|
| >PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.068 Score=48.82 Aligned_cols=97 Identities=15% Similarity=0.145 Sum_probs=73.5
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+.......|+..+.-- .|++++|+|- ..+|.=+..++...+++|++.......+.
T Consensus 209 ~f~PCTp~avielL~~y~i~l--~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~----------------- 269 (364)
T PLN02616 209 LFVPCTPKGCIELLHRYNVEI--KGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPE----------------- 269 (364)
T ss_pred CCCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHH-----------------
Confidence 356777777777776665322 7999999999 99999999999999999999875432211
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+..+.+|+++-++|....+. -+++++|..++++|...
T Consensus 270 ----~~~r~ADIVIsAvGkp~~i~--~d~vK~GAvVIDVGIn~ 306 (364)
T PLN02616 270 ----EITREADIIISAVGQPNMVR--GSWIKPGAVVIDVGINP 306 (364)
T ss_pred ----HHHhhCCEEEEcCCCcCcCC--HHHcCCCCEEEeccccc
Confidence 22357899999999875433 37899999999999754
|
|
| >cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.076 Score=44.21 Aligned_cols=117 Identities=13% Similarity=0.010 Sum_probs=76.5
Q ss_pred ccccchhhhhhchhhccCCC--------CCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC
Q 018158 161 APLLCAGITVFCPMKDNNLI--------DSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD 231 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~--------~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~ 231 (360)
..+||+....+..|+..+.. . -.|++++|+|- ..+|.=++.++...|++|++.+.+.... ...-+..
T Consensus 31 ~~~PCTp~avi~lL~~~~i~~~~~~~~~~-l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~---~~~~~~~ 106 (197)
T cd01079 31 SILPCTPLAIVKILEFLGIYNKILPYGNR-LYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQV---FTRGESI 106 (197)
T ss_pred CccCCCHHHHHHHHHHhCCcccccccCCC-CCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccc---ccccccc
Confidence 45677777777777665320 1 27999999999 9999999999999999999886443211 0101100
Q ss_pred -eEee-Ccc-HHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 232 -EFIL-STN-AMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 232 -~~v~-~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+--- ..+ .....+.-+.+|+++-++|.... .---+++++|..++++|...
T Consensus 107 ~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~~~~-~i~~d~ik~GavVIDVGi~~ 159 (197)
T cd01079 107 RHEKHHVTDEEAMTLDCLSQSDVVITGVPSPNY-KVPTELLKDGAICINFASIK 159 (197)
T ss_pred ccccccccchhhHHHHHhhhCCEEEEccCCCCC-ccCHHHcCCCcEEEEcCCCc
Confidence 0000 001 11133446789999999998754 12247899999999999754
|
The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional |
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.058 Score=48.29 Aligned_cols=94 Identities=14% Similarity=0.125 Sum_probs=68.7
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe-eCccHHHHHhcCCCcCEEEEcCCCcc--
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI-LSTNAMQMQAGKRTLDFILDTVSAKH-- 260 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~~~~~d~vid~~g~~~-- 260 (360)
...++|+|+ |-.|-+.+..+++.|.+.....||..+++.+...+|.+..+ .-..++...+...++++|++|+|-..
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVlncvGPyt~~ 85 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVLNCVGPYTRY 85 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEEecccccccc
Confidence 345788999 99999999999999999888999999999999989954332 22224455666789999999998321
Q ss_pred cHHHHHHHhccCCEEEEe
Q 018158 261 SLGPILELLKVNGTLSVV 278 (360)
Q Consensus 261 ~~~~~~~~l~~~G~~v~~ 278 (360)
....+-.|++.|-.++++
T Consensus 86 g~plv~aC~~~GTdY~Di 103 (382)
T COG3268 86 GEPLVAACAAAGTDYADI 103 (382)
T ss_pred ccHHHHHHHHhCCCeeec
Confidence 123444455555455544
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.07 Score=46.94 Aligned_cols=75 Identities=17% Similarity=0.162 Sum_probs=50.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH--cCCCe---EeeCccHHHHHhc-------CCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL--LGADE---FILSTNAMQMQAG-------KRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~--~g~~~---~v~~~~~~~~~~~-------~~~~d 250 (360)
.++++||+|+ |++|...++.+...|++|+++++++++.+...+. .+... ..|..+.+..... ..++|
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID 85 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 5789999999 9999999888888999999999888765333220 23221 1233333222111 24799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|.+.|.
T Consensus 86 ~vi~~ag~ 93 (258)
T PRK08628 86 GLVNNAGV 93 (258)
T ss_pred EEEECCcc
Confidence 99999983
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.12 Score=50.31 Aligned_cols=70 Identities=20% Similarity=0.238 Sum_probs=49.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChh-H----HHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS-K----EKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~-~----~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
.+++++|+|+|.+|+.++.+++..|++|+++++++. . .+.+++ .|....... ... ....+|+|+-+.|.
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~-~gv~~~~~~-~~~----~~~~~D~Vv~s~Gi 88 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEA-LGATVRLGP-GPT----LPEDTDLVVTSPGW 88 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHH-cCCEEEECC-Ccc----ccCCCCEEEECCCc
Confidence 577899999999999999999999999999986542 1 233444 665433322 111 23568999988885
Q ss_pred c
Q 018158 259 K 259 (360)
Q Consensus 259 ~ 259 (360)
.
T Consensus 89 ~ 89 (480)
T PRK01438 89 R 89 (480)
T ss_pred C
Confidence 4
|
|
| >PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.085 Score=46.90 Aligned_cols=96 Identities=18% Similarity=0.218 Sum_probs=71.8
Q ss_pred cccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHH--cCCeEEEEeCChhHHHHHHHHcCCCeEeeCcc
Q 018158 162 PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKA--FGHHVTVISTSPSKEKEAKELLGADEFILSTN 238 (360)
Q Consensus 162 ~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~--~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~ 238 (360)
.+||+..+.+..++..+--- .|++++|+|. ..+|.=++.++.. .+++|++..+....+
T Consensus 137 ~~PcTp~av~~ll~~~~i~l--~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l----------------- 197 (284)
T PRK14193 137 PLPCTPRGIVHLLRRYDVEL--AGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDL----------------- 197 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCH-----------------
Confidence 46777777777777665322 6999999999 9999988888877 789998887543211
Q ss_pred HHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 239 AMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 239 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
....+..|+++-++|....+. -+++++|..++++|...
T Consensus 198 ----~~~~k~ADIvV~AvGkp~~i~--~~~ik~GavVIDvGin~ 235 (284)
T PRK14193 198 ----AAHTRRADIIVAAAGVAHLVT--ADMVKPGAAVLDVGVSR 235 (284)
T ss_pred ----HHHHHhCCEEEEecCCcCccC--HHHcCCCCEEEEccccc
Confidence 122356899999999875433 47899999999999764
|
|
| >PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.038 Score=40.00 Aligned_cols=86 Identities=23% Similarity=0.328 Sum_probs=56.1
Q ss_pred EcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhcCCCcCEEEEcCCCc------ccHH
Q 018158 191 VGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAGKRTLDFILDTVSAK------HSLG 263 (360)
Q Consensus 191 ~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g~~------~~~~ 263 (360)
+|+| .|..+..+++..+.+|++++.+++.++.++++.....+ +...+.....-....+|+|+....-. ..+.
T Consensus 3 iG~G-~G~~~~~l~~~~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~sfD~v~~~~~~~~~~~~~~~l~ 81 (95)
T PF08241_consen 3 IGCG-TGRFAAALAKRGGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAEDLPFPDNSFDVVFSNSVLHHLEDPEAALR 81 (95)
T ss_dssp ET-T-TSHHHHHHHHTTTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTTSSSS-TT-EEEEEEESHGGGSSHHHHHHH
T ss_pred ecCc-CCHHHHHHHhccCCEEEEEeCCHHHHHHHHhcccccCchheeehHHhCccccccccccccccceeeccCHHHHHH
Confidence 4555 58888888888677999999999999999886543221 21222222222256799998755321 3468
Q ss_pred HHHHHhccCCEEEE
Q 018158 264 PILELLKVNGTLSV 277 (360)
Q Consensus 264 ~~~~~l~~~G~~v~ 277 (360)
++.+.|+++|+++.
T Consensus 82 e~~rvLk~gG~l~~ 95 (95)
T PF08241_consen 82 EIYRVLKPGGRLVI 95 (95)
T ss_dssp HHHHHEEEEEEEEE
T ss_pred HHHHHcCcCeEEeC
Confidence 99999999999864
|
The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B .... |
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.072 Score=46.62 Aligned_cols=74 Identities=19% Similarity=0.192 Sum_probs=51.3
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe---EeeCccHHHH-------HhcCCCcC
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE---FILSTNAMQM-------QAGKRTLD 250 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~-------~~~~~~~d 250 (360)
++++||+|+ |.+|...+..+...|++|++++++.++.+.+.+.+ +... ..|..+.+.. .+...+.|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 357999999 99999999888888999999999987766655422 2211 1244444322 22245689
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|.+.+.
T Consensus 81 ~vi~~a~~ 88 (255)
T TIGR01963 81 ILVNNAGI 88 (255)
T ss_pred EEEECCCC
Confidence 99988864
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.2 Score=41.97 Aligned_cols=94 Identities=21% Similarity=0.278 Sum_probs=60.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHH-cCCeEEEEeCChhHHHHHHHH---cCCCeE-eeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKA-FGHHVTVISTSPSKEKEAKEL---LGADEF-ILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~-~G~~V~~~~~~~~~~~~~~~~---~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
++.++|-+|+|. |..++.+++. .+++|++++.+++..+.+++. .+.+.+ +...+...... ...+|+|+.....
T Consensus 45 ~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~~~~~-~~~fDlV~~~~~~ 122 (187)
T PRK00107 45 GGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAEEFGQ-EEKFDVVTSRAVA 122 (187)
T ss_pred CCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHhhCCC-CCCccEEEEcccc
Confidence 688999998853 5555555554 467999999998876655543 444322 11111112222 4579999964322
Q ss_pred --cccHHHHHHHhccCCEEEEeC
Q 018158 259 --KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 259 --~~~~~~~~~~l~~~G~~v~~g 279 (360)
...+..+.+.++++|+++.+-
T Consensus 123 ~~~~~l~~~~~~LkpGG~lv~~~ 145 (187)
T PRK00107 123 SLSDLVELCLPLLKPGGRFLALK 145 (187)
T ss_pred CHHHHHHHHHHhcCCCeEEEEEe
Confidence 235678889999999998773
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.1 Score=45.79 Aligned_cols=74 Identities=22% Similarity=0.194 Sum_probs=49.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHcCCCeE-eeCccHHHHHhc-------CCCcCEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPS-KEKEAKELLGADEF-ILSTNAMQMQAG-------KRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~-~~~~~~~~~g~~~~-v~~~~~~~~~~~-------~~~~d~vi 253 (360)
.+++++|+|+ |++|...++.+...|++|+++.++.+ ..+.++. .+...+ .|-.+.+..... ..++|++|
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE-KGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh-CCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 5789999999 99999999998889999988765443 3344443 332211 244443332221 35799999
Q ss_pred EcCCC
Q 018158 254 DTVSA 258 (360)
Q Consensus 254 d~~g~ 258 (360)
.+.|.
T Consensus 85 ~~ag~ 89 (255)
T PRK06463 85 NNAGI 89 (255)
T ss_pred ECCCc
Confidence 99874
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.063 Score=46.56 Aligned_cols=71 Identities=18% Similarity=0.251 Sum_probs=50.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCC-eE--eeCccHHHHHhc---CCCcCEEEEc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGAD-EF--ILSTNAMQMQAG---KRTLDFILDT 255 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~-~~--v~~~~~~~~~~~---~~~~d~vid~ 255 (360)
.+++++|+|+ |.+|..+++.+...|+ +|++++++.++.+. .+.. .. .|-.+.+..... ...+|++|.+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 80 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNN 80 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 5688999999 9999999999999999 99999998776543 3321 11 233343333222 3468999999
Q ss_pred CCC
Q 018158 256 VSA 258 (360)
Q Consensus 256 ~g~ 258 (360)
.|.
T Consensus 81 ag~ 83 (238)
T PRK08264 81 AGI 83 (238)
T ss_pred CCc
Confidence 886
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.16 Score=45.24 Aligned_cols=74 Identities=18% Similarity=0.202 Sum_probs=52.8
Q ss_pred CCcEEEEEcC-ChHHHH-HHHHHHHcCCeEEEEeCChhHHHHHHHHc----CC---CeEeeCccHHH----HHhc--CCC
Q 018158 184 AKKRIGIVGL-GGLGHV-AVKFGKAFGHHVTVISTSPSKEKEAKELL----GA---DEFILSTNAMQ----MQAG--KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~-aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g~---~~~v~~~~~~~----~~~~--~~~ 248 (360)
.|++.+|.|+ .++|.+ +-+||+ .|.+|+.+.|+.+|++..++.. +. ..++|..+.+. .... +-.
T Consensus 48 ~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~ 126 (312)
T KOG1014|consen 48 LGSWAVVTGATDGIGKAYARELAK-RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD 126 (312)
T ss_pred cCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence 5799999999 999986 666776 8999999999999998887653 32 13356555532 2222 445
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+-+.+|++|.
T Consensus 127 VgILVNNvG~ 136 (312)
T KOG1014|consen 127 VGILVNNVGM 136 (312)
T ss_pred eEEEEecccc
Confidence 6677888883
|
|
| >PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.093 Score=46.67 Aligned_cols=97 Identities=14% Similarity=0.175 Sum_probs=72.1
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHc----CCeEEEEeCChhHHHHHHHHcCCCeEee
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAF----GHHVTVISTSPSKEKEAKELLGADEFIL 235 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~----G~~V~~~~~~~~~~~~~~~~~g~~~~v~ 235 (360)
..+||+....+..|+..+--- .|++++|+|- ..+|.=+..++... +++|++..+....+.
T Consensus 131 ~~~PcTp~avi~lL~~~~i~l--~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T~~l~------------- 195 (287)
T PRK14181 131 GFIPCTPAGIIELLKYYEIPL--HGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQSENLT------------- 195 (287)
T ss_pred CCCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCCCCHH-------------
Confidence 467787777777777665333 6999999999 99999888888887 788887764332111
Q ss_pred CccHHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 236 STNAMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 236 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+..+..|+++-++|....+. -+++++|..++++|...
T Consensus 196 --------~~~~~ADIvV~AvG~p~~i~--~~~ik~GavVIDvGin~ 232 (287)
T PRK14181 196 --------EILKTADIIIAAIGVPLFIK--EEMIAEKAVIVDVGTSR 232 (287)
T ss_pred --------HHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEecccc
Confidence 12356899999999875433 47899999999999754
|
|
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.074 Score=47.94 Aligned_cols=85 Identities=22% Similarity=0.248 Sum_probs=58.0
Q ss_pred EEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHHH--
Q 018158 188 IGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPI-- 265 (360)
Q Consensus 188 vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~-- 265 (360)
|.|+|.|.+|...+..+...|.+|++.++++++.+.+.+ .|.... .+. .+.-...|+||.|+.........
T Consensus 2 IgvIG~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~~---~~~---~~~~~~aDivi~~vp~~~~~~~v~~ 74 (291)
T TIGR01505 2 VGFIGLGIMGSPMSINLAKAGYQLHVTTIGPEVADELLA-AGAVTA---ETA---RQVTEQADVIFTMVPDSPQVEEVAF 74 (291)
T ss_pred EEEEEecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-CCCccc---CCH---HHHHhcCCEEEEecCCHHHHHHHHc
Confidence 678899999998888888889999999999999888877 665322 111 12235688999888765333332
Q ss_pred -----HHHhccCCEEEEeC
Q 018158 266 -----LELLKVNGTLSVVG 279 (360)
Q Consensus 266 -----~~~l~~~G~~v~~g 279 (360)
...++++..+++.+
T Consensus 75 ~~~~~~~~~~~g~iivd~s 93 (291)
T TIGR01505 75 GENGIIEGAKPGKTLVDMS 93 (291)
T ss_pred CcchHhhcCCCCCEEEECC
Confidence 23345555555554
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.16 Score=43.97 Aligned_cols=99 Identities=21% Similarity=0.258 Sum_probs=67.5
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHc---CCCeEeeCccHHHHH-hcCCCcCEEE-E
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKELL---GADEFILSTNAMQMQ-AGKRTLDFIL-D 254 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~~---g~~~~v~~~~~~~~~-~~~~~~d~vi-d 254 (360)
+.||++|+=.|.| .|.+++-||+..|- +|+..+..++..+.|++++ |....+.....+... .....+|++| |
T Consensus 92 i~pg~rVlEAGtG-SG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv~~~~~~~~vDav~LD 170 (256)
T COG2519 92 ISPGSRVLEAGTG-SGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDVREGIDEEDVDAVFLD 170 (256)
T ss_pred CCCCCEEEEcccC-chHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEeccccccccccccCEEEEc
Confidence 5599998887775 38888889988875 7999999999887776653 433222111111111 1145899987 4
Q ss_pred cCCCcccHHHHHHHhccCCEEEEeCCC
Q 018158 255 TVSAKHSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 255 ~~g~~~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
----...++.+.+.|++||.++.+-..
T Consensus 171 mp~PW~~le~~~~~Lkpgg~~~~y~P~ 197 (256)
T COG2519 171 LPDPWNVLEHVSDALKPGGVVVVYSPT 197 (256)
T ss_pred CCChHHHHHHHHHHhCCCcEEEEEcCC
Confidence 443345678999999999999988544
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.088 Score=46.26 Aligned_cols=74 Identities=15% Similarity=0.108 Sum_probs=48.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChh--HHHHHHHHcCCCeE---eeCccHHHHHh-------cCCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPS--KEKEAKELLGADEF---ILSTNAMQMQA-------GKRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~--~~~~~~~~~g~~~~---v~~~~~~~~~~-------~~~~~d 250 (360)
.++++||+|+ |++|.++++.+...|++|+.++++.. ..+.+.+ .+.... .|-.+.+.... ...++|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTA-LGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 5789999999 99999999999999999998876432 2233333 442211 23333322211 135799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|++.|.
T Consensus 88 ~li~~Ag~ 95 (253)
T PRK08993 88 ILVNNAGL 95 (253)
T ss_pred EEEECCCC
Confidence 99999974
|
|
| >COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.064 Score=47.20 Aligned_cols=97 Identities=15% Similarity=0.170 Sum_probs=76.0
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+....+..+++.+.-- .|++++|+|. ..+|.=..+++...+++|++..+....+..
T Consensus 134 ~~~PCTp~gi~~ll~~~~i~l--~Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T~~l~~---------------- 195 (283)
T COG0190 134 GFLPCTPAGIMTLLEEYGIDL--RGKNVVVVGRSNIVGKPLALLLLNANATVTVCHSRTKDLAS---------------- 195 (283)
T ss_pred CCCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCCcCcHHHHHHHHhCCCEEEEEcCCCCCHHH----------------
Confidence 466888888888888777433 7999999999 899999999999999999998865422221
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
..+..|+++-++|.+..+. -+++++|..++++|...
T Consensus 196 -----~~k~ADIvv~AvG~p~~i~--~d~vk~gavVIDVGinr 231 (283)
T COG0190 196 -----ITKNADIVVVAVGKPHFIK--ADMVKPGAVVIDVGINR 231 (283)
T ss_pred -----HhhhCCEEEEecCCccccc--cccccCCCEEEecCCcc
Confidence 2356899999999875444 37899999999999764
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.28 Score=42.50 Aligned_cols=75 Identities=16% Similarity=0.211 Sum_probs=48.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhH-HHHHHHH---cCCCeE-e--eCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSK-EKEAKEL---LGADEF-I--LSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~-~~~~~~~---~g~~~~-v--~~~~~~~~~~~-------~~~ 248 (360)
.+++++|+|+ |.+|..++..+...|++|+++.++... .+..... .+.... + |..+.+..... ..+
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999999 999999999999999999887766542 2222211 232211 1 44443322221 247
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|.++.+.|.
T Consensus 84 id~vi~~ag~ 93 (248)
T PRK05557 84 VDILVNNAGI 93 (248)
T ss_pred CCEEEECCCc
Confidence 8999998874
|
|
| >COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.2 Score=44.71 Aligned_cols=92 Identities=20% Similarity=0.285 Sum_probs=63.9
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCe---------EeeCccHHHHHhcCCCcCEEE-E
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADE---------FILSTNAMQMQAGKRTLDFIL-D 254 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~---------~v~~~~~~~~~~~~~~~d~vi-d 254 (360)
++|||+|.|. |-.+-.++|+... ++++++-+++=.+.+++.|+..+ ++..+....++....++|+|| |
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~~fDvIi~D 156 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEEKFDVIIVD 156 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCCcCCEEEEc
Confidence 6999998754 4556677777765 79999999998888888766322 222222234444456899997 5
Q ss_pred cCCC---------cccHHHHHHHhccCCEEEEe
Q 018158 255 TVSA---------KHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 255 ~~g~---------~~~~~~~~~~l~~~G~~v~~ 278 (360)
++.. ..-++.+.++|+++|.++.-
T Consensus 157 ~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q 189 (282)
T COG0421 157 STDPVGPAEALFTEEFYEGCRRALKEDGIFVAQ 189 (282)
T ss_pred CCCCCCcccccCCHHHHHHHHHhcCCCcEEEEe
Confidence 5543 23368899999999999876
|
|
| >PRK06436 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.1 Score=47.28 Aligned_cols=87 Identities=22% Similarity=0.343 Sum_probs=63.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc---
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH--- 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~--- 260 (360)
.|+++.|+|.|.+|...+++++.+|++|++.+++... .+.... ..+ ..+.-...|+|+.+.....
T Consensus 121 ~gktvgIiG~G~IG~~vA~~l~afG~~V~~~~r~~~~-------~~~~~~--~~~---l~ell~~aDiv~~~lp~t~~T~ 188 (303)
T PRK06436 121 YNKSLGILGYGGIGRRVALLAKAFGMNIYAYTRSYVN-------DGISSI--YME---PEDIMKKSDFVLISLPLTDETR 188 (303)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcc-------cCcccc--cCC---HHHHHhhCCEEEECCCCCchhh
Confidence 6899999999999999999999999999999986321 222211 112 2334457899999887432
Q ss_pred --cHHHHHHHhccCCEEEEeCCCC
Q 018158 261 --SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 261 --~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.-...++.|+++..+++++.-.
T Consensus 189 ~li~~~~l~~mk~ga~lIN~sRG~ 212 (303)
T PRK06436 189 GMINSKMLSLFRKGLAIINVARAD 212 (303)
T ss_pred cCcCHHHHhcCCCCeEEEECCCcc
Confidence 1256789999999998887543
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.088 Score=50.34 Aligned_cols=88 Identities=26% Similarity=0.417 Sum_probs=58.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc---H
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS---L 262 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~---~ 262 (360)
++.|+|+ |.+|.+.+..++..|.+|+++++++++.......+|.. . ..+. .+.....|+||-|+..... +
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~-~--~~~~---~e~~~~aDvVIlavp~~~~~~vl 75 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVE-Y--ANDN---IDAAKDADIVIISVPINVTEDVI 75 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCe-e--ccCH---HHHhccCCEEEEecCHHHHHHHH
Confidence 5788985 99999999999999999999999987754433337752 1 1111 1223467888888875422 2
Q ss_pred HHHHHHhccCCEEEEeCC
Q 018158 263 GPILELLKVNGTLSVVGA 280 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~ 280 (360)
..+...++++..+++++.
T Consensus 76 ~~l~~~l~~~~iViDvsS 93 (437)
T PRK08655 76 KEVAPHVKEGSLLMDVTS 93 (437)
T ss_pred HHHHhhCCCCCEEEEccc
Confidence 333444556666777764
|
|
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.061 Score=43.64 Aligned_cols=88 Identities=19% Similarity=0.311 Sum_probs=59.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC-----CC-----eEeeCccHHHHHhcCCCcCEEEEcC
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG-----AD-----EFILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g-----~~-----~~v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
+|.|+|+|..|.+++..+...|.+|+...++++..+.+++.-. .+ .+.-. ++..+.-++.|+++-++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t---~dl~~a~~~ad~Iiiav 77 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKAT---TDLEEALEDADIIIIAV 77 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEE---SSHHHHHTT-SEEEE-S
T ss_pred CEEEECcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccc---cCHHHHhCcccEEEecc
Confidence 4789999999999999999999999999999988887776311 11 11111 12233456899999999
Q ss_pred CCcccHHHHHHHhcc---CCEEEEe
Q 018158 257 SAKHSLGPILELLKV---NGTLSVV 278 (360)
Q Consensus 257 g~~~~~~~~~~~l~~---~G~~v~~ 278 (360)
.... +...++.+++ .+..+..
T Consensus 78 Ps~~-~~~~~~~l~~~l~~~~~ii~ 101 (157)
T PF01210_consen 78 PSQA-HREVLEQLAPYLKKGQIIIS 101 (157)
T ss_dssp -GGG-HHHHHHHHTTTSHTT-EEEE
T ss_pred cHHH-HHHHHHHHhhccCCCCEEEE
Confidence 8764 5777777766 3444444
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.079 Score=51.25 Aligned_cols=72 Identities=11% Similarity=0.212 Sum_probs=53.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~ 260 (360)
.+++++|+|+|++|.+++..+...|++|+++.++.++.+.+.+.++.. .+...+ ... -..+|++++|++...
T Consensus 331 ~~k~vlIiGaGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~-~~~~~~---~~~-l~~~DiVInatP~g~ 402 (477)
T PRK09310 331 NNQHVAIVGAGGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGK-AFPLES---LPE-LHRIDIIINCLPPSV 402 (477)
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc-eechhH---hcc-cCCCCEEEEcCCCCC
Confidence 578899999999999999999999999999999988877766645422 222111 111 247999999997654
|
|
| >PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.02 Score=51.37 Aligned_cols=128 Identities=23% Similarity=0.256 Sum_probs=73.4
Q ss_pred ecceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHH
Q 018158 144 DYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEK 222 (360)
Q Consensus 144 ~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~ 222 (360)
+.+.++.|.+++.+-... ...| ..+++.+... .++|++||=+|+|. |.+++..+|. |+ +|++++.++...+
T Consensus 127 ~~~~~I~idPg~AFGTG~----H~TT-~lcl~~l~~~-~~~g~~vLDvG~GS-GILaiaA~kl-GA~~v~a~DiDp~Av~ 198 (295)
T PF06325_consen 127 PDEIVIEIDPGMAFGTGH----HPTT-RLCLELLEKY-VKPGKRVLDVGCGS-GILAIAAAKL-GAKKVVAIDIDPLAVE 198 (295)
T ss_dssp TTSEEEEESTTSSS-SSH----CHHH-HHHHHHHHHH-SSTTSEEEEES-TT-SHHHHHHHHT-TBSEEEEEESSCHHHH
T ss_pred CCcEEEEECCCCcccCCC----CHHH-HHHHHHHHHh-ccCCCEEEEeCCcH-HHHHHHHHHc-CCCeEEEecCCHHHHH
Confidence 345577777777655432 1112 2223322222 34889999998853 6666665554 87 6999999988766
Q ss_pred HHHHH---cCC-CeEeeCccHHHHHhcCCCcCEEEEcCCCcc---cHHHHHHHhccCCEEEEeCCCC
Q 018158 223 EAKEL---LGA-DEFILSTNAMQMQAGKRTLDFILDTVSAKH---SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 223 ~~~~~---~g~-~~~v~~~~~~~~~~~~~~~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.+++. .|. +.+...... .....+||+|+-..-... ....+.+.++++|.++..|...
T Consensus 199 ~a~~N~~~N~~~~~~~v~~~~---~~~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl~ 262 (295)
T PF06325_consen 199 AARENAELNGVEDRIEVSLSE---DLVEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSGILE 262 (295)
T ss_dssp HHHHHHHHTT-TTCEEESCTS---CTCCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEEG
T ss_pred HHHHHHHHcCCCeeEEEEEec---ccccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEccccH
Confidence 66553 232 222111111 112378999996554331 2356677889999999998765
|
Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A .... |
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.2 Score=43.80 Aligned_cols=69 Identities=13% Similarity=0.108 Sum_probs=47.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe---EeeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE---FILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~d~v 252 (360)
.++++||+|+ |.+|...++.+...|++|++++++. ... .+... ..|-.+.+..... ..++|++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LTQ-EDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hhh-cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999999 9999999998888999999999876 122 23211 1233333222221 3568999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|++.|.
T Consensus 81 i~~ag~ 86 (252)
T PRK08220 81 VNAAGI 86 (252)
T ss_pred EECCCc
Confidence 999874
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.099 Score=46.40 Aligned_cols=72 Identities=22% Similarity=0.287 Sum_probs=49.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHh-------cCCCcCEE
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQA-------GKRTLDFI 252 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~-------~~~~~d~v 252 (360)
+++|+|+ |++|..+++.+...|++|++++++.++.+.+.+. .+.+.. .|-.+.+.... ...++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899999 9999999888888899999999988776554332 232221 13333222211 13579999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|++.|.
T Consensus 82 I~~ag~ 87 (270)
T PRK05650 82 VNNAGV 87 (270)
T ss_pred EECCCC
Confidence 999884
|
|
| >PRK06823 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.15 Score=46.47 Aligned_cols=94 Identities=19% Similarity=0.224 Sum_probs=66.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHc-CC-eEEEEeCChhHHHHHHHHc---CCCeEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAF-GH-HVTVISTSPSKEKEAKELL---GADEFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~-G~-~V~~~~~~~~~~~~~~~~~---g~~~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
..+++.|+|+|..+...++.+... .. +|.+.+++.++.+.+.+.+ +....+. +..++.-.+.|+|+-|++.
T Consensus 127 d~~~l~iiG~G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~~----~~~~~av~~ADIV~taT~s 202 (315)
T PRK06823 127 HVSAIGIVGTGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNTT----LDAAEVAHAANLIVTTTPS 202 (315)
T ss_pred CCCEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEE----CCHHHHhcCCCEEEEecCC
Confidence 567889999999998877766653 44 6999999999877655433 3322111 1223445789999998876
Q ss_pred cccHHHHHHHhccCCEEEEeCCCC
Q 018158 259 KHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 259 ~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
...+-. .+++++|-++..+|...
T Consensus 203 ~~P~~~-~~~l~~G~hi~~iGs~~ 225 (315)
T PRK06823 203 REPLLQ-AEDIQPGTHITAVGADS 225 (315)
T ss_pred CCceeC-HHHcCCCcEEEecCCCC
Confidence 654322 36899999999999765
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.15 Score=45.76 Aligned_cols=40 Identities=25% Similarity=0.423 Sum_probs=34.7
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHH
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAK 225 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~ 225 (360)
++|.|+|+|.+|.-.++.+...|.+|++.+++++.++.+.
T Consensus 6 ~~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~ 45 (286)
T PRK07819 6 QRVGVVGAGQMGAGIAEVCARAGVDVLVFETTEELATAGR 45 (286)
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence 4788999999999888888888999999999999877643
|
|
| >PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.093 Score=46.96 Aligned_cols=97 Identities=14% Similarity=0.146 Sum_probs=72.5
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHc----CCeEEEEeCChhHHHHHHHHcCCCeEee
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAF----GHHVTVISTSPSKEKEAKELLGADEFIL 235 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~----G~~V~~~~~~~~~~~~~~~~~g~~~~v~ 235 (360)
..+||+.......|+..+.-- .|++++|+|. ..+|.-.+.++... +++|++..+....+
T Consensus 139 ~~~PcTp~avi~lL~~~~i~l--~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~T~~l-------------- 202 (297)
T PRK14168 139 KFLPCTPAGIQEMLVRSGVET--SGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTRSKNL-------------- 202 (297)
T ss_pred CCcCCCHHHHHHHHHHhCCCC--CCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCCCcCH--------------
Confidence 457888777777777765433 7999999999 99999888888877 68898876433211
Q ss_pred CccHHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 236 STNAMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 236 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
....+..|+++-++|....+. -+++++|..++++|...
T Consensus 203 -------~~~~~~ADIvVsAvGkp~~i~--~~~ik~gavVIDvGin~ 240 (297)
T PRK14168 203 -------ARHCQRADILIVAAGVPNLVK--PEWIKPGATVIDVGVNR 240 (297)
T ss_pred -------HHHHhhCCEEEEecCCcCccC--HHHcCCCCEEEecCCCc
Confidence 122357899999999875433 47899999999999654
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.11 Score=45.15 Aligned_cols=75 Identities=15% Similarity=0.057 Sum_probs=49.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHc---CC-C---eEeeCccHHHHHhc-------CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSP-SKEKEAKELL---GA-D---EFILSTNAMQMQAG-------KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~-~~~~~~~~~~---g~-~---~~v~~~~~~~~~~~-------~~ 247 (360)
.++++||+|+ |.+|..+++.+...|++|++++++. ++.+.+.+.+ +. . ...|..+.+..... ..
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5688999999 9999998888888899999999863 3333332211 11 1 11244443333221 24
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|++|.+.|.
T Consensus 85 ~~d~vi~~ag~ 95 (249)
T PRK09135 85 RLDALVNNASS 95 (249)
T ss_pred CCCEEEECCCC
Confidence 68999999873
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.23 Score=39.02 Aligned_cols=91 Identities=20% Similarity=0.249 Sum_probs=54.4
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCh-------------------hH----HHHHHHHcCCCeEeeCcc--
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSP-------------------SK----EKEAKELLGADEFILSTN-- 238 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~-------------------~~----~~~~~~~~g~~~~v~~~~-- 238 (360)
..+|+|+|+|++|..++..+-..|. ++++++.+. .| .+.+++..+..++.....
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 81 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI 81 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence 4689999999999999999988899 688888542 11 122233122222221111
Q ss_pred -HHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEE
Q 018158 239 -AMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTL 275 (360)
Q Consensus 239 -~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~ 275 (360)
.......-+++|+||+|......-..+.+..+..+.-
T Consensus 82 ~~~~~~~~~~~~d~vi~~~d~~~~~~~l~~~~~~~~~p 119 (135)
T PF00899_consen 82 DEENIEELLKDYDIVIDCVDSLAARLLLNEICREYGIP 119 (135)
T ss_dssp SHHHHHHHHHTSSEEEEESSSHHHHHHHHHHHHHTT-E
T ss_pred ccccccccccCCCEEEEecCCHHHHHHHHHHHHHcCCC
Confidence 1222333468999999998765544555555555543
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.16 Score=46.05 Aligned_cols=38 Identities=29% Similarity=0.250 Sum_probs=31.8
Q ss_pred CCcEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCChhHHH
Q 018158 184 AKKRIGIVGL---GGLGHVAVKFGKAFGHHVTVISTSPSKEK 222 (360)
Q Consensus 184 ~~~~vlI~Ga---g~vG~~aiqla~~~G~~V~~~~~~~~~~~ 222 (360)
.|+++||+|+ +++|.++++.+...|++|++ +++.++++
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~ 48 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALN 48 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhh
Confidence 6899999999 89999999999999999988 55544443
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.015 Score=55.85 Aligned_cols=90 Identities=17% Similarity=0.114 Sum_probs=56.0
Q ss_pred CCCcEEE----EEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-eEeeCccHHHHHhcCCCcCEEEEcC
Q 018158 183 PAKKRIG----IVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-EFILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 183 ~~~~~vl----I~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
++|+.+| |+|+ |++|.+++|+++..|++|+++.+.+.+....+. .+.+ .++|...........
T Consensus 32 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~l~---------- 100 (450)
T PRK08261 32 RPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWG-DRFGALVFDATGITDPADLK---------- 100 (450)
T ss_pred CCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCcC-CcccEEEEECCCCCCHHHHH----------
Confidence 3888887 8877 999999999999999999998866553222111 2222 233332221111100
Q ss_pred CCcccHHHHHHHhccCCEEEEeCCCCC
Q 018158 257 SAKHSLGPILELLKVNGTLSVVGAPEA 283 (360)
Q Consensus 257 g~~~~~~~~~~~l~~~G~~v~~g~~~~ 283 (360)
+-...+...++.|.++|+++.++....
T Consensus 101 ~~~~~~~~~l~~l~~~griv~i~s~~~ 127 (450)
T PRK08261 101 ALYEFFHPVLRSLAPCGRVVVLGRPPE 127 (450)
T ss_pred HHHHHHHHHHHhccCCCEEEEEccccc
Confidence 001234667788889999999987653
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.073 Score=48.99 Aligned_cols=35 Identities=26% Similarity=0.305 Sum_probs=30.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCh
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSP 218 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~ 218 (360)
.+.+|+|+|+|++|..++..+-..|. ++++++++.
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 45789999999999999999999998 788888763
|
|
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.22 Score=45.08 Aligned_cols=89 Identities=17% Similarity=0.190 Sum_probs=57.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHH--
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGP-- 264 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~-- 264 (360)
+|-|+|.|.+|...+..+...|.+|++.++++++.+.+.+ .|.... .+.....+.....|+|+-++... ....
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~-~g~~~~---~s~~~~~~~~~~~dvIi~~vp~~-~~~~v~ 76 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKE-DRTTGV---ANLRELSQRLSAPRVVWVMVPHG-IVDAVL 76 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCccc---CCHHHHHhhcCCCCEEEEEcCch-HHHHHH
Confidence 4788999999998888888889999999999999888887 664322 12212222224567777777654 2333
Q ss_pred --HHHHhccCCEEEEeCC
Q 018158 265 --ILELLKVNGTLSVVGA 280 (360)
Q Consensus 265 --~~~~l~~~G~~v~~g~ 280 (360)
+...++++-.+++.+.
T Consensus 77 ~~l~~~l~~g~ivid~st 94 (298)
T TIGR00872 77 EELAPTLEKGDIVIDGGN 94 (298)
T ss_pred HHHHhhCCCCCEEEECCC
Confidence 3333445545555543
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.078 Score=46.49 Aligned_cols=70 Identities=17% Similarity=0.147 Sum_probs=48.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC---eEeeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD---EFILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~~-------~~~~d~v 252 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++ .. .+.. ...|..+.+..... ..++|++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 79 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----TV-DGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----hh-cCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999999 999999999998899999999988754 11 2221 11243443322221 3568999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|.+.|.
T Consensus 80 i~~ag~ 85 (252)
T PRK07856 80 VNNAGG 85 (252)
T ss_pred EECCCC
Confidence 999873
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.11 Score=46.82 Aligned_cols=87 Identities=21% Similarity=0.276 Sum_probs=59.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHHH-
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPI- 265 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~- 265 (360)
+|.|+|.|.+|...+..+...|.+|++.++++++.+.+.+ .|.... .+. .+.....|+||.|+.........
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~-~g~~~~---~~~---~e~~~~~d~vi~~vp~~~~~~~v~ 76 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIA-AGAETA---STA---KAVAEQCDVIITMLPNSPHVKEVA 76 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-CCCeec---CCH---HHHHhcCCEEEEeCCCHHHHHHHH
Confidence 5889999999998888777889999999999988887777 664311 111 12234689999988755433333
Q ss_pred ------HHHhccCCEEEEeCC
Q 018158 266 ------LELLKVNGTLSVVGA 280 (360)
Q Consensus 266 ------~~~l~~~G~~v~~g~ 280 (360)
...++++..+++.+.
T Consensus 77 ~~~~~~~~~~~~g~iiid~st 97 (296)
T PRK11559 77 LGENGIIEGAKPGTVVIDMSS 97 (296)
T ss_pred cCcchHhhcCCCCcEEEECCC
Confidence 234455555665554
|
|
| >PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.17 Score=43.22 Aligned_cols=94 Identities=23% Similarity=0.200 Sum_probs=60.4
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe--EeeCccHHHHHhcCCCcCEEEEcC
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE--FILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~--~v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
.+++++||-+|+|. |..+..+++.. .+|+.++.+++..+.+++++ |... ++........ .....+|+|+...
T Consensus 76 ~~~~~~VLeiG~Gs-G~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~I~~~~ 152 (212)
T PRK00312 76 LKPGDRVLEIGTGS-GYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGW-PAYAPFDRILVTA 152 (212)
T ss_pred CCCCCEEEEECCCc-cHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcccCC-CcCCCcCEEEEcc
Confidence 34889999998853 55555566553 48999999988777766643 4322 1211111111 1135799998765
Q ss_pred CCcccHHHHHHHhccCCEEEEe
Q 018158 257 SAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 257 g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
........+.+.|+++|+++..
T Consensus 153 ~~~~~~~~l~~~L~~gG~lv~~ 174 (212)
T PRK00312 153 AAPEIPRALLEQLKEGGILVAP 174 (212)
T ss_pred CchhhhHHHHHhcCCCcEEEEE
Confidence 5555567888999999998755
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.12 Score=45.67 Aligned_cols=75 Identities=15% Similarity=0.152 Sum_probs=50.0
Q ss_pred CCcEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCCh--hHHHHHHHHcCCC---eEeeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL---GGLGHVAVKFGKAFGHHVTVISTSP--SKEKEAKELLGAD---EFILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga---g~vG~~aiqla~~~G~~V~~~~~~~--~~~~~~~~~~g~~---~~v~~~~~~~~~~~-------~~~ 248 (360)
.+++++|+|+ +++|.++++.+...|++|++++++. +..+.+.+.++.. ...|-.+.+..... ..+
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999985 7999999988888999999998653 3344444435421 11243333322211 357
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|+++++.|.
T Consensus 86 iD~li~nAG~ 95 (256)
T PRK07889 86 LDGVVHSIGF 95 (256)
T ss_pred CcEEEEcccc
Confidence 9999998874
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.1 Score=46.09 Aligned_cols=74 Identities=15% Similarity=0.127 Sum_probs=48.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHH----cCCC-e--EeeCccHHHHHhc-------CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIST-SPSKEKEAKEL----LGAD-E--FILSTNAMQMQAG-------KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~-~~~~~~~~~~~----~g~~-~--~v~~~~~~~~~~~-------~~ 247 (360)
.++++||+|+ +++|.+++..+...|++|+++.+ +.++.+.+.+. .|.. . ..|-.+.+..... ..
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 5789999999 99999999988899999988864 44444333221 2322 1 1244443322211 35
Q ss_pred CcCEEEEcCC
Q 018158 248 TLDFILDTVS 257 (360)
Q Consensus 248 ~~d~vid~~g 257 (360)
++|+++++.|
T Consensus 87 ~id~lv~nAg 96 (260)
T PRK08416 87 RVDFFISNAI 96 (260)
T ss_pred CccEEEECcc
Confidence 6899999885
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.081 Score=49.01 Aligned_cols=86 Identities=14% Similarity=0.143 Sum_probs=54.9
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhH----HHHHHHHcCC------CeE-eeC
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSK----EKEAKELLGA------DEF-ILS 236 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~----~~~~~~~~g~------~~~-v~~ 236 (360)
|||.-++....+ ++++|+|+|+ |-+|..++..+...|.+|+++++.... ...+....+. ..+ .|-
T Consensus 2 ~~~~~~~~~~~~---~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di 78 (348)
T PRK15181 2 TAYEELRTKLVL---APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI 78 (348)
T ss_pred chhhhhhhcccc---cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccC
Confidence 566666544422 5688999999 999999999999999999999875432 1111111111 111 233
Q ss_pred ccHHHHHhcCCCcCEEEEcCC
Q 018158 237 TNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 237 ~~~~~~~~~~~~~d~vid~~g 257 (360)
.+...+...-.++|+||.+++
T Consensus 79 ~d~~~l~~~~~~~d~ViHlAa 99 (348)
T PRK15181 79 RKFTDCQKACKNVDYVLHQAA 99 (348)
T ss_pred CCHHHHHHHhhCCCEEEECcc
Confidence 333344444457999999886
|
|
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.12 Score=47.55 Aligned_cols=86 Identities=19% Similarity=0.268 Sum_probs=61.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc---
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH--- 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~--- 260 (360)
.|.++.|+|.|.+|...++.++..|.+|++.+++.+......+ .. ....+.-...|+|+.+.....
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~---------~~--~~l~ell~~aDiVil~lP~t~~t~ 213 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDFLT---------YK--DSVKEAIKDADIISLHVPANKESY 213 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhh---------cc--CCHHHHHhcCCEEEEeCCCcHHHH
Confidence 5789999999999999999999999999999988654221111 10 112334467899998887542
Q ss_pred --cHHHHHHHhccCCEEEEeCC
Q 018158 261 --SLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 261 --~~~~~~~~l~~~G~~v~~g~ 280 (360)
.....+..|+++..+++++.
T Consensus 214 ~li~~~~l~~mk~gavlIN~aR 235 (330)
T PRK12480 214 HLFDKAMFDHVKKGAILVNAAR 235 (330)
T ss_pred HHHhHHHHhcCCCCcEEEEcCC
Confidence 12466778888888888864
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.1 Score=46.21 Aligned_cols=75 Identities=23% Similarity=0.151 Sum_probs=49.0
Q ss_pred CCcEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCC---hhHHHHHHHHcCCCe--EeeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL---GGLGHVAVKFGKAFGHHVTVISTS---PSKEKEAKELLGADE--FILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga---g~vG~~aiqla~~~G~~V~~~~~~---~~~~~~~~~~~g~~~--~v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ +++|.++++.+...|++|+++.+. .++.+.+.+.++... ..|-.+.+..... .++
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 5789999994 689999988888899999987643 344444444355322 2344443322211 357
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|+++++.|.
T Consensus 85 iD~lvnnAG~ 94 (260)
T PRK06997 85 LDGLVHSIGF 94 (260)
T ss_pred CcEEEEcccc
Confidence 9999998874
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.097 Score=45.59 Aligned_cols=73 Identities=14% Similarity=0.133 Sum_probs=49.5
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc----CCC-eE--eeCccHHHHH----hcCCCcCEEE
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL----GAD-EF--ILSTNAMQMQ----AGKRTLDFIL 253 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g~~-~~--v~~~~~~~~~----~~~~~~d~vi 253 (360)
++++|+|+ |++|...++.+...|++|+++++++++.+.+.+.+ +.. ++ .|..+..... .....+|+++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv 81 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL 81 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence 57899999 99999999988889999999999987765543322 111 11 2333332222 2234679999
Q ss_pred EcCCC
Q 018158 254 DTVSA 258 (360)
Q Consensus 254 d~~g~ 258 (360)
.+.|.
T Consensus 82 ~~ag~ 86 (243)
T PRK07102 82 IAVGT 86 (243)
T ss_pred ECCcC
Confidence 88774
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.12 Score=47.90 Aligned_cols=75 Identities=16% Similarity=0.147 Sum_probs=52.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc--CCC-eEe--eCccHHHHHhcCCCcCEEEEcCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL--GAD-EFI--LSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~--g~~-~~v--~~~~~~~~~~~~~~~d~vid~~g 257 (360)
.+.+|||+|+ |.+|..+++.+...|.+|++++++.++.+.+.+.+ +.. .++ |..+.+.....-.++|+||.+++
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~ 88 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVAA 88 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECCc
Confidence 6789999999 99999999999889999999988876555443322 111 111 33333344444457999999886
Q ss_pred C
Q 018158 258 A 258 (360)
Q Consensus 258 ~ 258 (360)
.
T Consensus 89 ~ 89 (353)
T PLN02896 89 S 89 (353)
T ss_pred c
Confidence 3
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.12 Score=45.11 Aligned_cols=75 Identities=15% Similarity=0.169 Sum_probs=51.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCe-E--eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADE-F--ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~-~--v~~~~~~~~~~~-------~~~~ 249 (360)
+++++||+|+ |.+|..+++.+...|++|++++++.++.+.+.+. .+... . .|..+.+..... ..++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5788999999 9999999999988999999999988776554432 23221 1 233333222221 2468
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|.+.|.
T Consensus 82 d~vi~~ag~ 90 (250)
T TIGR03206 82 DVLVNNAGW 90 (250)
T ss_pred CEEEECCCC
Confidence 999999973
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK13302 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.17 Score=45.07 Aligned_cols=89 Identities=17% Similarity=0.182 Sum_probs=60.3
Q ss_pred CcEEEEEcCChHHHHHHHHHHH--cCCeEE-EEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKA--FGHHVT-VISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~--~G~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
.-++-|+|.|.+|...++.+.. .++++. +.++++++.+.+.+++|....+. +.+. .....|+|+.|++...+
T Consensus 6 ~irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~~--~~ee---ll~~~D~Vvi~tp~~~h 80 (271)
T PRK13302 6 ELRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPVV--PLDQ---LATHADIVVEAAPASVL 80 (271)
T ss_pred eeEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCcccC--CHHH---HhcCCCEEEECCCcHHH
Confidence 3578999999999987776665 367765 55667777666655576432222 2222 22458999999998766
Q ss_pred HHHHHHHhccCCEEEEe
Q 018158 262 LGPILELLKVNGTLSVV 278 (360)
Q Consensus 262 ~~~~~~~l~~~G~~v~~ 278 (360)
.+....+++.|..++..
T Consensus 81 ~e~~~~aL~aGk~Vi~~ 97 (271)
T PRK13302 81 RAIVEPVLAAGKKAIVL 97 (271)
T ss_pred HHHHHHHHHcCCcEEEe
Confidence 66677788877666654
|
|
| >PRK05708 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.11 Score=47.19 Aligned_cols=92 Identities=15% Similarity=0.133 Sum_probs=57.1
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH------HhcCCCcCEEEEcCCCc
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM------QAGKRTLDFILDTVSAK 259 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~------~~~~~~~d~vid~~g~~ 259 (360)
.+++|+|+|++|....-.+...|.+|+.+++..++.+.+++.-|. .+......... ......+|++|-|+=..
T Consensus 3 m~I~IiGaGaiG~~~a~~L~~~G~~V~lv~r~~~~~~~i~~~~Gl-~i~~~g~~~~~~~~~~~~~~~~~~D~viv~vK~~ 81 (305)
T PRK05708 3 MTWHILGAGSLGSLWACRLARAGLPVRLILRDRQRLAAYQQAGGL-TLVEQGQASLYAIPAETADAAEPIHRLLLACKAY 81 (305)
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCeEEEEechHHHHHHhhcCCe-EEeeCCcceeeccCCCCcccccccCEEEEECCHH
Confidence 368999999999987777777899999999988888777652232 11111110000 01124689999887433
Q ss_pred c---cHHHHHHHhccCCEEEEe
Q 018158 260 H---SLGPILELLKVNGTLSVV 278 (360)
Q Consensus 260 ~---~~~~~~~~l~~~G~~v~~ 278 (360)
. .+..+...+.++..++.+
T Consensus 82 ~~~~al~~l~~~l~~~t~vv~l 103 (305)
T PRK05708 82 DAEPAVASLAHRLAPGAELLLL 103 (305)
T ss_pred hHHHHHHHHHhhCCCCCEEEEE
Confidence 2 234444455666666655
|
|
| >PRK01581 speE spermidine synthase; Validated | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.37 Score=44.42 Aligned_cols=95 Identities=17% Similarity=0.155 Sum_probs=62.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcC------------CC-eEeeCccHHHHHhcCCCc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLG------------AD-EFILSTNAMQMQAGKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g------------~~-~~v~~~~~~~~~~~~~~~ 249 (360)
..++|||+|+| .|.++..+++..+ .+|++++.+++-.+.+++ +. .. .++..+....+......+
T Consensus 150 ~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~-~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~~~~~Y 227 (374)
T PRK01581 150 DPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARN-VPELVSLNKSAFFDNRVNVHVCDAKEFLSSPSSLY 227 (374)
T ss_pred CCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh-ccccchhccccCCCCceEEEECcHHHHHHhcCCCc
Confidence 56799999975 4667777777655 489999999998888885 21 11 112222223334446689
Q ss_pred CEEEEcCCCc-----------ccHHHHHHHhccCCEEEEeCC
Q 018158 250 DFILDTVSAK-----------HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 250 d~vid~~g~~-----------~~~~~~~~~l~~~G~~v~~g~ 280 (360)
|+||--...+ ..+..+.+.|+++|.++.-..
T Consensus 228 DVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs~ 269 (374)
T PRK01581 228 DVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQSN 269 (374)
T ss_pred cEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 9998443221 236788999999999877643
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.11 Score=47.16 Aligned_cols=34 Identities=26% Similarity=0.117 Sum_probs=31.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTS 217 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~ 217 (360)
.+++++|+|+ +++|.++++.+...|++|++++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 5789999999 999999999999999999999987
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.19 Score=48.36 Aligned_cols=71 Identities=23% Similarity=0.317 Sum_probs=49.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh-hHH----HHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP-SKE----KEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~-~~~----~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
.+++++|+|+|.+|+.++..+...|++|++++++. +.. +.+.+ .|.. ++..+..+ ....++|+|+.+.|.
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~-~~~~-~~~~~~~~---~~~~~~d~vv~~~g~ 78 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE-LGIE-LVLGEYPE---EFLEGVDLVVVSPGV 78 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-cCCE-EEeCCcch---hHhhcCCEEEECCCC
Confidence 47899999998899999999999999999999874 222 33333 4544 22221111 223569999999885
Q ss_pred c
Q 018158 259 K 259 (360)
Q Consensus 259 ~ 259 (360)
.
T Consensus 79 ~ 79 (450)
T PRK14106 79 P 79 (450)
T ss_pred C
Confidence 4
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.11 Score=43.13 Aligned_cols=74 Identities=16% Similarity=0.204 Sum_probs=51.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC--CeEe---eCccHHH----HHhc---CCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA--DEFI---LSTNAMQ----MQAG---KRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~--~~~v---~~~~~~~----~~~~---~~~~d 250 (360)
..+.++|.|+ +++|.+..|++-..|++|.+.+.+.+..+.....+|. +|.- |-.+... +++. -..++
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ps 92 (256)
T KOG1200|consen 13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPS 92 (256)
T ss_pred hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCc
Confidence 3466788888 9999999999999999999999887765555554764 3321 2222211 1221 34799
Q ss_pred EEEEcCC
Q 018158 251 FILDTVS 257 (360)
Q Consensus 251 ~vid~~g 257 (360)
++++|.|
T Consensus 93 vlVncAG 99 (256)
T KOG1200|consen 93 VLVNCAG 99 (256)
T ss_pred EEEEcCc
Confidence 9999999
|
|
| >PLN02490 MPBQ/MSBQ methyltransferase | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.15 Score=46.79 Aligned_cols=96 Identities=21% Similarity=0.290 Sum_probs=63.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhcCCCcCEEEEcCC----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAGKRTLDFILDTVS---- 257 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g---- 257 (360)
++.+||-+|+|. |..+..+++..+ .+|++++.+++-++.++++.....+ +...+..........+|+|+.+..
T Consensus 113 ~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~gD~e~lp~~~~sFDvVIs~~~L~~~ 191 (340)
T PLN02490 113 RNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIEGDAEDLPFPTDYADRYVSAGSIEYW 191 (340)
T ss_pred CCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEeccHHhCCCCCCceeEEEEcChhhhC
Confidence 678899999865 667777777764 5899999999888888775432111 111111111111356999986432
Q ss_pred --CcccHHHHHHHhccCCEEEEeCC
Q 018158 258 --AKHSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 258 --~~~~~~~~~~~l~~~G~~v~~g~ 280 (360)
....++++.+.|+++|+++.++.
T Consensus 192 ~d~~~~L~e~~rvLkPGG~LvIi~~ 216 (340)
T PLN02490 192 PDPQRGIKEAYRVLKIGGKACLIGP 216 (340)
T ss_pred CCHHHHHHHHHHhcCCCcEEEEEEe
Confidence 12356889999999999987753
|
|
| >PRK10637 cysG siroheme synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.19 Score=48.44 Aligned_cols=117 Identities=10% Similarity=-0.042 Sum_probs=73.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP-SKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~-~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
.|++|||+|+|.++.-=++.+...|++|+++...- +.+..+.+ .|.-..+. .+. ....-.++++||-|+++....
T Consensus 11 ~~~~vlvvGgG~vA~rk~~~ll~~ga~v~visp~~~~~~~~l~~-~~~i~~~~-~~~--~~~dl~~~~lv~~at~d~~~n 86 (457)
T PRK10637 11 RDRDCLLVGGGDVAERKARLLLDAGARLTVNALAFIPQFTAWAD-AGMLTLVE-GPF--DESLLDTCWLAIAATDDDAVN 86 (457)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHh-CCCEEEEe-CCC--ChHHhCCCEEEEECCCCHHHh
Confidence 68999999999999988888888999999997642 23333333 33222221 111 111135789999999988766
Q ss_pred HHHHHHhccCCEEEEeCCCCCCcccChhh-HhccCcEEEEeec
Q 018158 263 GPILELLKVNGTLSVVGAPEAPFELPSFP-LIFGKRSVKGSMT 304 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~ 304 (360)
.++....+..|.++++.......++-... +....+++.-+..
T Consensus 87 ~~i~~~a~~~~~lvN~~d~~~~~~f~~pa~~~~g~l~iaisT~ 129 (457)
T PRK10637 87 QRVSEAAEARRIFCNVVDAPKAASFIMPSIIDRSPLMVAVSSG 129 (457)
T ss_pred HHHHHHHHHcCcEEEECCCcccCeEEEeeEEecCCEEEEEECC
Confidence 67777777888888876554322222222 2233455544433
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.18 Score=44.32 Aligned_cols=75 Identities=13% Similarity=0.148 Sum_probs=48.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHc---CCCe-E--eeCccHHHHHh-------cCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTS-PSKEKEAKELL---GADE-F--ILSTNAMQMQA-------GKRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~-~~~~~~~~~~~---g~~~-~--v~~~~~~~~~~-------~~~~ 248 (360)
.++++||+|+ |.+|..+++.+...|++|+++.+. .++.+.+.+.+ +... . .|..+.+.... ...+
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5678999999 999999998888899998887653 44444333322 3321 1 23333322221 1357
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|.+.|.
T Consensus 88 iD~vi~~ag~ 97 (258)
T PRK09134 88 ITLLVNNASL 97 (258)
T ss_pred CCEEEECCcC
Confidence 9999999873
|
|
| >TIGR00438 rrmJ cell division protein FtsJ | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.17 Score=42.35 Aligned_cols=92 Identities=18% Similarity=0.187 Sum_probs=55.8
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHH---HH--hcCCCcCEEEE-
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQ---MQ--AGKRTLDFILD- 254 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~---~~--~~~~~~d~vid- 254 (360)
++|++||.+|+|+-+.+.....+..+ .+|++++.++.+ ...+.+.+ .|..+... .. ....++|+|+.
T Consensus 31 ~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~-----~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D~V~~~ 105 (188)
T TIGR00438 31 KPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK-----PIENVDFIRGDFTDEEVLNKIRERVGDDKVDVVMSD 105 (188)
T ss_pred CCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc-----cCCCceEEEeeCCChhHHHHHHHHhCCCCccEEEcC
Confidence 49999999999765554444333323 479999998754 11233222 13322211 11 12457999995
Q ss_pred cC----CC------------cccHHHHHHHhccCCEEEEeC
Q 018158 255 TV----SA------------KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 255 ~~----g~------------~~~~~~~~~~l~~~G~~v~~g 279 (360)
.. |. ...+..+.++|+++|+++...
T Consensus 106 ~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 106 AAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred CCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 22 21 235677899999999998764
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.1 Score=49.12 Aligned_cols=98 Identities=17% Similarity=0.194 Sum_probs=61.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHH------HHHHHc-CCCeE-eeCccHHHHHhcC----CCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEK------EAKELL-GADEF-ILSTNAMQMQAGK----RTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~------~~~~~~-g~~~~-v~~~~~~~~~~~~----~~~d 250 (360)
.+.+++|+|+ |.+|..+++.+...|.+|++++++..+.. ...... +.+.+ .|..+.+.+...- .++|
T Consensus 59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~D 138 (390)
T PLN02657 59 KDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPVD 138 (390)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCCc
Confidence 6789999999 99999999999889999999998875421 111112 22222 2444444443331 2799
Q ss_pred EEEEcCCCcc------------cHHHHHHHhccC--CEEEEeCCC
Q 018158 251 FILDTVSAKH------------SLGPILELLKVN--GTLSVVGAP 281 (360)
Q Consensus 251 ~vid~~g~~~------------~~~~~~~~l~~~--G~~v~~g~~ 281 (360)
+||+|.+... ....+++.++.. ++++.++..
T Consensus 139 ~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~ 183 (390)
T PLN02657 139 VVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI 183 (390)
T ss_pred EEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence 9999886321 112344544443 478877654
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 360 | ||||
| 1yqd_A | 366 | Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ | 1e-110 | ||
| 1uuf_A | 369 | Crystal Structure Of A Zinc-Type Alcohol Dehydrogen | 2e-77 | ||
| 2cf5_A | 357 | Crystal Structures Of The Arabidopsis Cinnamyl Alco | 3e-75 | ||
| 3two_A | 348 | The Crystal Structure Of Cad From Helicobacter Pylo | 3e-59 | ||
| 1ps0_A | 360 | Crystal Structure Of The Nadp(H)-Dependent Cinnamyl | 8e-41 | ||
| 1llu_A | 342 | The Ternary Complex Of Pseudomonas Aeruginosa Alcoh | 1e-37 | ||
| 1rjw_A | 339 | Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd | 3e-36 | ||
| 3s1l_A | 340 | Crystal Structure Of Apo-Form Furx Length = 340 | 4e-36 | ||
| 3pii_A | 339 | Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog | 4e-36 | ||
| 3meq_A | 365 | Crystal Structure Of Alcohol Dehydrogenase From Bru | 3e-34 | ||
| 2hcy_A | 347 | Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi | 8e-31 | ||
| 4eex_A | 348 | Crystal Structure Of Lactococcus Lactis Alcohol Deh | 4e-23 | ||
| 4eez_A | 348 | Crystal Structure Of Lactococcus Lactis Alcohol Deh | 7e-23 | ||
| 1h2b_A | 359 | Crystal Structure Of The Alcohol Dehydrogenase From | 5e-22 | ||
| 3i4c_A | 347 | Crystal Structure Of Sulfolobus Solfataricus Adh(Ss | 9e-17 | ||
| 2eer_A | 347 | Structural Study Of Project Id St2577 From Sulfolob | 9e-17 | ||
| 1r37_A | 347 | Alcohol Dehydrogenase From Sulfolobus Solfataricus | 3e-16 | ||
| 1nto_A | 347 | N249y Mutant Of Alcohol Dehydrogenase From The Arch | 4e-16 | ||
| 1jvb_A | 347 | Alcohol Dehydrogenase From The Archaeon Sulfolobus | 5e-14 | ||
| 2xaa_A | 345 | Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube | 6e-13 | ||
| 3uog_A | 363 | Crystal Structure Of Putative Alcohol Dehydrogenase | 1e-12 | ||
| 1e3j_A | 352 | Ketose Reductase (Sorbitol Dehydrogenase) From Silv | 2e-12 | ||
| 1hdy_A | 374 | Three-Dimensional Structures Of Three Human Alcohol | 3e-12 | ||
| 1cdo_A | 374 | Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co | 3e-12 | ||
| 1d1t_A | 373 | Mutant Of Human Sigma Alcohol Dehydrogenase With Le | 3e-12 | ||
| 1agn_A | 373 | X-Ray Structure Of Human Sigma Alcohol Dehydrogenas | 3e-12 | ||
| 3uko_A | 378 | Crystal Structure Of S-Nitrosoglutathione Reductase | 6e-12 | ||
| 2h6e_A | 344 | Crystal Structure Of The D-Arabinose Dehydrogenase | 9e-12 | ||
| 4dl9_A | 396 | Crystal Structure Of S-nitrosoglutathione Reductase | 2e-11 | ||
| 1hdx_A | 374 | Three-Dimensional Structures Of Three Human Alcohol | 2e-11 | ||
| 1htb_A | 374 | Crystallization Of Human Beta3 Alcohol Dehydrogenas | 2e-11 | ||
| 1f8f_A | 371 | Crystal Structure Of Benzyl Alcohol Dehydrogenase F | 3e-11 | ||
| 4a2c_A | 346 | Crystal Structure Of Galactitol-1-Phosphate Dehydro | 3e-11 | ||
| 1hdz_A | 374 | Three-Dimensional Structures Of Three Human Alcohol | 3e-11 | ||
| 4ej6_A | 370 | Crystal Structure Of A Putative Zinc-Binding Dehydr | 3e-11 | ||
| 1ht0_A | 374 | Human Gamma-2 Alcohol Dehydrogense Length = 374 | 2e-10 | ||
| 1vj0_A | 380 | Crystal Structure Of Alcohol Dehydrogenase (Tm0436) | 3e-10 | ||
| 3cos_A | 381 | Crystal Structure Of Human Class Ii Alcohol Dehydro | 4e-10 | ||
| 1mc5_A | 374 | Ternary Complex Of Human Glutathione-Dependent Form | 5e-10 | ||
| 1teh_A | 373 | Structure Of Human Liver Chichi Alcohol Dehydrogena | 5e-10 | ||
| 3qj5_A | 374 | S-Nitrosoglutathione Reductase (Gsnor) In Complex W | 5e-10 | ||
| 1hso_A | 374 | Human Alpha Alcohol Dehydrogenase (Adh1a) Length = | 5e-10 | ||
| 2eih_A | 343 | Crystal Structure Of Nad-Dependent Alcohol Dehydrog | 2e-09 | ||
| 1e3l_A | 376 | P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase | 2e-09 | ||
| 4ilk_A | 359 | Crystal Structure Of Short Chain Alcohol Dehydrogen | 3e-09 | ||
| 2fzw_A | 373 | Structure Of The Binary Complex Of The E67l Mutant | 4e-09 | ||
| 1p0c_A | 373 | Crystal Structure Of The Nadp(H)-Dependent Vertebra | 8e-09 | ||
| 1pl7_A | 356 | Human Sorbitol Dehydrogenase (Apo) Length = 356 | 1e-08 | ||
| 1axg_A | 374 | Crystal Structure Of The Val203->ala Mutant Of Live | 1e-08 | ||
| 1ju9_A | 374 | Horse Liver Alcohol Dehydrogenase Val292ser Mutant | 1e-08 | ||
| 1n8k_A | 374 | Horse Liver Alcohol Dehydrogenase Val292thr Mutant | 1e-08 | ||
| 6adh_A | 374 | Structure Of Triclinic Ternary Complex Of Horse Liv | 1e-08 | ||
| 1qlh_A | 374 | Horse Liver Alcohol Dehydrogenase Complexed To Nad | 1e-08 | ||
| 3oq6_A | 374 | Horse Liver Alcohol Dehydrogenase A317c Mutant Comp | 1e-08 | ||
| 1mgo_A | 374 | Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L | 2e-08 | ||
| 1pl6_A | 356 | Human SdhNADHINHIBITOR COMPLEX Length = 356 | 2e-08 | ||
| 1e3e_A | 376 | Mouse Class Ii Alcohol Dehydrogenase Complex With N | 2e-08 | ||
| 1a71_A | 374 | Ternary Complex Of An Active Site Double Mutant Of | 2e-08 | ||
| 1axe_A | 374 | Crystal Structure Of The Active-Site Mutant Phe93-> | 2e-08 | ||
| 3ip1_A | 404 | Structure Of Putative Alcohol Dehydrogenase (Tm_042 | 3e-08 | ||
| 3qe3_A | 355 | Sheep Liver Sorbitol Dehydrogenase Length = 355 | 7e-08 | ||
| 1ee2_A | 373 | The Structure Of Steroid-Active Alcohol Dehydrogena | 7e-08 | ||
| 1ee2_B | 373 | The Structure Of Steroid-Active Alcohol Dehydrogena | 7e-08 | ||
| 1qv6_A | 374 | Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG | 8e-08 | ||
| 2dfv_A | 347 | Hyperthermophilic Threonine Dehydrogenase From Pyro | 1e-07 | ||
| 2d8a_A | 348 | Crystal Structure Of Ph0655 From Pyrococcus Horikos | 1e-07 | ||
| 2dq4_A | 343 | Crystal Structure Of Threonine 3-Dehydrogenase Leng | 2e-07 | ||
| 3gfb_A | 350 | L-Threonine Dehydrogenase (Tktdh) From The Hyperthe | 6e-07 | ||
| 1kol_A | 398 | Crystal Structure Of Formaldehyde Dehydrogenase Len | 2e-06 | ||
| 3m6i_A | 363 | L-Arabinitol 4-Dehydrogenase Length = 363 | 1e-05 | ||
| 2dph_A | 398 | Crystal Structure Of Formaldehyde Dismutase Length | 8e-05 | ||
| 3fpl_A | 351 | Chimera Of Alcohol Dehydrogenase By Exchange Of The | 2e-04 | ||
| 1ykf_A | 352 | Nadp-Dependent Alcohol Dehydrogenase From Thermoana | 2e-04 | ||
| 2nvb_A | 352 | Contribution Of Pro275 To The Thermostability Of Th | 2e-04 | ||
| 1jqb_A | 351 | Alcohol Dehydrogenase From Clostridium Beijerinckii | 2e-04 | ||
| 3ftn_A | 352 | Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDRO | 2e-04 | ||
| 3fsr_A | 352 | Chimera Of Alcohol Dehydrogenase By Exchange Of The | 2e-04 | ||
| 1ped_A | 351 | Bacterial Secondary Alcohol Dehydrogenase (Apo-Form | 3e-04 | ||
| 3jyl_A | 325 | Crystal Structures Of Pseudomonas Syringae Pv. Toma | 3e-04 | ||
| 3fpc_A | 352 | Chimera Of Alcohol Dehydrogenase By Exchange Of The | 4e-04 | ||
| 2b83_A | 351 | A Single Amino Acid Substitution In The Clostridium | 9e-04 |
| >pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ Length = 366 | Back alignment and structure |
|
| >pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol Dehydrogenase-Like Protein Yahk Length = 369 | Back alignment and structure |
|
| >pdb|2CF5|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol Dehydrogenases, Atcad5 Length = 357 | Back alignment and structure |
|
| >pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori Complexed With Nadp(H) Length = 348 | Back alignment and structure |
|
| >pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl Alcohol Dehydrogenase From Saccharomyces Cerevisiae Length = 360 | Back alignment and structure |
|
| >pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342 | Back alignment and structure |
|
| >pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339 | Back alignment and structure |
|
| >pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340 | Back alignment and structure |
|
| >pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339 | Back alignment and structure |
|
| >pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365 | Back alignment and structure |
|
| >pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347 | Back alignment and structure |
|
| >pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348 | Back alignment and structure |
|
| >pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348 | Back alignment and structure |
|
| >pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution Length = 359 | Back alignment and structure |
|
| >pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347 | Back alignment and structure |
|
| >pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347 | Back alignment and structure |
|
| >pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347 | Back alignment and structure |
|
| >pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347 | Back alignment and structure |
|
| >pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347 | Back alignment and structure |
|
| >pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345 | Back alignment and structure |
|
| >pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363 | Back alignment and structure |
|
| >pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352 | Back alignment and structure |
|
| >pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374 | Back alignment and structure |
|
| >pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374 | Back alignment and structure |
|
| >pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373 | Back alignment and structure |
|
| >pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373 | Back alignment and structure |
|
| >pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378 | Back alignment and structure |
|
| >pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344 | Back alignment and structure |
|
| >pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396 | Back alignment and structure |
|
| >pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374 | Back alignment and structure |
|
| >pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374 | Back alignment and structure |
|
| >pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371 | Back alignment and structure |
|
| >pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346 | Back alignment and structure |
|
| >pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374 | Back alignment and structure |
|
| >pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370 | Back alignment and structure |
|
| >pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374 | Back alignment and structure |
|
| >pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380 | Back alignment and structure |
|
| >pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381 | Back alignment and structure |
|
| >pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374 | Back alignment and structure |
|
| >pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373 | Back alignment and structure |
|
| >pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374 | Back alignment and structure |
|
| >pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374 | Back alignment and structure |
|
| >pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343 | Back alignment and structure |
|
| >pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376 | Back alignment and structure |
|
| >pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359 | Back alignment and structure |
|
| >pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373 | Back alignment and structure |
|
| >pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373 | Back alignment and structure |
|
| >pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356 | Back alignment and structure |
|
| >pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374 | Back alignment and structure |
|
| >pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374 | Back alignment and structure |
|
| >pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374 | Back alignment and structure |
|
| >pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374 | Back alignment and structure |
|
| >pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374 | Back alignment and structure |
|
| >pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374 | Back alignment and structure |
|
| >pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374 | Back alignment and structure |
|
| >pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356 | Back alignment and structure |
|
| >pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376 | Back alignment and structure |
|
| >pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374 | Back alignment and structure |
|
| >pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374 | Back alignment and structure |
|
| >pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From Thermotoga Maritima Length = 404 | Back alignment and structure |
|
| >pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355 | Back alignment and structure |
|
| >pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373 | Back alignment and structure |
|
| >pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373 | Back alignment and structure |
|
| >pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374 | Back alignment and structure |
|
| >pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347 | Back alignment and structure |
|
| >pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348 | Back alignment and structure |
|
| >pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343 | Back alignment and structure |
|
| >pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350 | Back alignment and structure |
|
| >pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase Length = 398 | Back alignment and structure |
|
| >pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase Length = 363 | Back alignment and structure |
|
| >pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase Length = 398 | Back alignment and structure |
|
| >pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351 | Back alignment and structure |
|
| >pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium Brockii Length = 352 | Back alignment and structure |
|
| >pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The Alcohol Dehydrogenases (Adhs) Length = 352 | Back alignment and structure |
|
| >pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351 | Back alignment and structure |
|
| >pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352 | Back alignment and structure |
|
| >pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352 | Back alignment and structure |
|
| >pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351 | Back alignment and structure |
|
| >pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325 | Back alignment and structure |
|
| >pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By E. Histolytica Adh Length = 352 | Back alignment and structure |
|
| >pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization Length = 351 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366 | Back alignment and structure |
|---|
Score = 587 bits (1516), Expect = 0.0
Identities = 201/357 (56%), Positives = 254/357 (71%), Gaps = 3/357 (0%)
Query: 1 MAQTT-PNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKND 59
M+++ H GWAA D SG ++P+ F RR G DV K+LYCG+CH+D+H +KND
Sbjct: 5 MSKSPEEEHPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKND 64
Query: 60 WGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKI 119
WG +MYP+VPGHEI G +T+VGS VK VGD+ VGCL AC CE C + ENYC K+
Sbjct: 65 WGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKM 124
Query: 120 QFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNL 179
TY I+ DG+ITYGGYS +VA+ R+++ P+N+ +D APLLCAGITV+ P+K L
Sbjct: 125 ILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGL 184
Query: 180 IDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239
K IGIVGLGGLGHVAVKF KAFG VTVISTSPSK++EA + GAD F++S +
Sbjct: 185 --DEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQ 242
Query: 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSV 299
QMQA TLD I+DTVSA H L P+ LLK +G L +VGAPE P ELP+F LI G++ V
Sbjct: 243 EQMQAAAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIV 302
Query: 300 KGSMTGGMRETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIAG 356
GS GGM+ETQEM++ K+NIT +IEVI D +N A++RLA+NDVRYRFVID+
Sbjct: 303 AGSGIGGMKETQEMIDFAAKHNITADIEVISTDYLNTAMERLAKNDVRYRFVIDVGN 359
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357 | Back alignment and structure |
|---|
Score = 572 bits (1477), Expect = 0.0
Identities = 157/349 (44%), Positives = 228/349 (65%), Gaps = 2/349 (0%)
Query: 8 HTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPV 67
+ GWAA DPSG ++PY + RE G DV I+I+ CGICHTD+H KND G++ YP+
Sbjct: 6 AERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPM 65
Query: 68 VPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIF 127
VPGHE+ G + +VGS+V F VGD VGCL C C C+ E YC K ++YN ++
Sbjct: 66 VPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVY 125
Query: 128 WDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKR 187
+G T GG+++ V +FVV +PE +A++ AAPLLCAG+TV+ P+ L R
Sbjct: 126 INGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGL--KQPGLR 183
Query: 188 IGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKR 247
GI+GLGG+GH+ VK KA GHHVTVIS+S K +EA + LGAD++++ ++ +M
Sbjct: 184 GGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELAD 243
Query: 248 TLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGM 307
+LD+++DTV H+L P L LLK++G L ++G P + + L+ G++ + GS G M
Sbjct: 244 SLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSM 303
Query: 308 RETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIAG 356
+ET+EM+ C + ++ IEV+K D +N A +RL +NDVRYRFV+D+ G
Sbjct: 304 KETEEMLEFCKEKGLSSIIEVVKMDYVNTAFERLEKNDVRYRFVVDVEG 352
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369 | Back alignment and structure |
|---|
Score = 557 bits (1437), Expect = 0.0
Identities = 155/357 (43%), Positives = 217/357 (60%), Gaps = 7/357 (1%)
Query: 2 AQTTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG 61
+ A+ + P RRE G NDV I+I YCG+CH+D+H V+++W
Sbjct: 13 TSLYKKAGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWA 72
Query: 62 ITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQF 121
T+YP VPGHEI G + VG V+ + GD VGC+ +C CE C+D ENYCD +
Sbjct: 73 GTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTG 132
Query: 122 TYNGIFWDG-SITYGGYSEMLVADYRFVVHVPENIA-MDAAAPLLCAGITVFCPMKDNNL 179
TYN D T GGYS+ +V R+V+ + + A APLLCAGIT + P++
Sbjct: 133 TYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQA 192
Query: 180 IDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239
K++G+VG+GGLGH+ +K A G HV +TS +K + AK LGADE + S NA
Sbjct: 193 ---GPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-LGADEVVNSRNA 248
Query: 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPS-FPLIFGKRS 298
+M A ++ DFIL+TV+A H+L LLK +GT+++VGAP P + P F LI +R+
Sbjct: 249 DEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRA 308
Query: 299 VKGSMTGGMRETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIA 355
+ GSM GG+ ETQEM++ C ++ I +IE+I+ DQINEA +R+ R DV+YRFVID
Sbjct: 309 IAGSMIGGIPETQEMLDFCAEHGIVADIEMIRADQINEAYERMLRGDVKYRFVIDNR 365
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360 | Back alignment and structure |
|---|
Score = 540 bits (1395), Expect = 0.0
Identities = 113/354 (31%), Positives = 174/354 (49%), Gaps = 12/354 (3%)
Query: 8 HTQSVVGWAAHDPS--GKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMY 65
+ + G A + + +D+ IKI CG+C +DIH WG
Sbjct: 3 YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKM 62
Query: 66 PVVPGHEITGIITKVGSNV-KNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYN 124
P+V GHEI G + K+G KVG R VG +C+EC+ CK+ E YC K TY+
Sbjct: 63 PLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYS 122
Query: 125 GIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPA 184
+ DG ++ GGY+ + FVV +PENI AAPLLC G+TV+ P+ N P
Sbjct: 123 QPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVRNGC--GPG 180
Query: 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN-AMQMQ 243
KK +GIVGLGG+G + KA G VIS S K ++A + +GAD +I + +
Sbjct: 181 KK-VGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK-MGADHYIATLEEGDWGE 238
Query: 244 AGKRTLDFILDTVSAKHSL--GPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKG 301
T D I+ S+ + + + +KV G + + PE L P S+
Sbjct: 239 KYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISY 298
Query: 302 SMTGGMRETQEMMNVCGKYNITCNIEVIKPDQ--INEALDRLARNDVRYRFVID 353
S G ++E +++ + + +I +E + + ++EA +R+ + DVRYRF +
Sbjct: 299 SALGSIKELNQLLKLVSEKDIKIWVETLPVGEAGVHEAFERMEKGDVRYRFTLV 352
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348 | Back alignment and structure |
|---|
Score = 535 bits (1381), Expect = 0.0
Identities = 134/353 (37%), Positives = 192/353 (54%), Gaps = 14/353 (3%)
Query: 9 TQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVV 68
G+A P+ F R G DV I ILY GICH+DIH ++W +YP++
Sbjct: 2 RVQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMI 61
Query: 69 PGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGI-- 126
PGHEI GII +VG VK FK+GD VGC +C C+ CK+ QE +C K+ FTY+ +
Sbjct: 62 PGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDS 121
Query: 127 FWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKK 186
F D GGYS +V D +V+ V +N ++ APLLCAGIT + P+K + +
Sbjct: 122 FHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLKFSKV---TKGT 178
Query: 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGK 246
++G+ G GGLG +AVK+ A G V+V + + K+++A +G F K
Sbjct: 179 KVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-MGVKHFYTDPKQC-----K 232
Query: 247 RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP--FELPSFPLI-FGKRSVKGSM 303
LDFI+ T+ + L L+LL NG L++VG P L F I G R V GS+
Sbjct: 233 EELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSL 292
Query: 304 TGGMRETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIAG 356
GG++ETQEM++ K+NI I++I I+ A L ++R+VID+
Sbjct: 293 IGGIKETQEMVDFSIKHNIYPEIDLILGKDIDTAYHNLTHGKAKFRYVIDMKK 345
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347 | Back alignment and structure |
|---|
Score = 445 bits (1146), Expect = e-157
Identities = 94/350 (26%), Positives = 164/350 (46%), Gaps = 19/350 (5%)
Query: 14 GWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHE 72
G ++ GK+ + N++ I + Y G+CHTD+H DW + P+V GHE
Sbjct: 8 GVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHE 67
Query: 73 ITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSI 132
G++ +G NVK +K+GD A + L +CM CE+C+ E+ C + G
Sbjct: 68 GAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLS-------GYT 120
Query: 133 TYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVG 192
G + + AD H+P+ + AP+LCAGITV+ +K NL + I G
Sbjct: 121 HDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSANL--MAGHW-VAISG 177
Query: 193 L-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN-----AMQMQAGK 246
GGLG +AV++ KA G+ V I KE+ + + G + FI T ++A
Sbjct: 178 AAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSI-GGEVFIDFTKEKDIVGAVLKATD 236
Query: 247 RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAP-EAPFELPSFPLIFGKRSVKGSMTG 305
+++ ++ ++ ++ NGT +VG P A F + S+ GS G
Sbjct: 237 GGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVG 296
Query: 306 GMRETQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIA 355
+T+E ++ + + I+V+ + E +++ + + R+V+D +
Sbjct: 297 NRADTREALDFFARGLVKSPIKVVGLSTLPEIYEKMEKGQIVGRYVVDTS 346
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339 | Back alignment and structure |
|---|
Score = 435 bits (1120), Expect = e-154
Identities = 99/345 (28%), Positives = 163/345 (47%), Gaps = 15/345 (4%)
Query: 14 GWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHE 72
+ ++ +V ++I CG+CHTD+H DW + P++PGHE
Sbjct: 3 AAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHE 62
Query: 73 ITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSI 132
GI+ +VG V + KVGDR + L +AC C++C QE C+ + G
Sbjct: 63 GVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNA-------GYS 115
Query: 133 TYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVG 192
GGY+E A +VV +P+N++ + AAP+ CAG+T + +K + + I G
Sbjct: 116 VDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGA---KPGEWVAIYG 172
Query: 193 LGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN---AMQMQAGKRTL 249
+GGLGHVAV++ KA G +V + K + AKEL GAD + A M+ +
Sbjct: 173 IGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKEL-GADLVVNPLKEDAAKFMKEKVGGV 231
Query: 250 DFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRE 309
+ T +K + ++ G +VG P +P F + + GS+ G ++
Sbjct: 232 HAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKD 291
Query: 310 TQEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDI 354
QE + + + IEV ++INE DR+ + + R V+ +
Sbjct: 292 LQEALQFAAEGKVKTIIEVQPLEKINEVFDRMLKGQINGRVVLTL 336
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340 | Back alignment and structure |
|---|
Score = 431 bits (1110), Expect = e-152
Identities = 102/344 (29%), Positives = 163/344 (47%), Gaps = 15/344 (4%)
Query: 16 AAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEIT 74
+T + G V +KI G+CHTD+H DW + P +PGHE
Sbjct: 7 VVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGV 66
Query: 75 GIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITY 134
G ++ VGS V K GDR V L +AC CE C E C+K Q T G
Sbjct: 67 GYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNT-------GYSVN 119
Query: 135 GGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLG 194
GGY E +VAD +V +P+ + AP+LCAG+TV+ +K + P + + I G+G
Sbjct: 120 GGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKVTDT--RPGQW-VVISGIG 176
Query: 195 GLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN---AMQMQAGKRTLDF 251
GLGHVAV++ +A G V + +K A+ L GA+ + + + A +Q
Sbjct: 177 GLGHVAVQYARAMGLRVAAVDIDDAKLNLARRL-GAEVAVNARDTDPAAWLQKEIGGAHG 235
Query: 252 ILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQ 311
+L T + + + +++ GT+++ G P F P F ++ +++GS+ G + Q
Sbjct: 236 VLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQ 295
Query: 312 EMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIA 355
E ++ ++ + K D +N+ RL V R V+D +
Sbjct: 296 ESLDFAAHGDVKATVSTAKLDDVNDVFGRLREGKVEGRVVLDFS 339
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359 | Back alignment and structure |
|---|
Score = 255 bits (654), Expect = 4e-83
Identities = 90/329 (27%), Positives = 155/329 (47%), Gaps = 22/329 (6%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMY---PVVPGHEITGIITKVGSNVKNFKVGD 91
G DV ++I G+CHTD+H V+ W + P GHE G I +V V+ + GD
Sbjct: 40 GRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGD 99
Query: 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV 151
+ A C C+ ++ +C+ ++F G+ DG G++E + +R V+ +
Sbjct: 100 PVIL-HPAVTDGTCLACRAGEDMHCENLEFP--GLNIDG-----GFAEFMRTSHRSVIKL 151
Query: 152 PENI---AMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFG 208
P++I + APL AGIT + +K + IVG+GGLGH+AV+ K
Sbjct: 152 PKDISREKLVEMAPLADAGITAYRAVK-KAARTLYPGAYVAIVGVGGLGHIAVQLLKVMT 210
Query: 209 H-HVTVISTSPSKEKEAKELLGADEFILSTN----AMQMQAGKRTLDFILDTVSAKHSLG 263
V + K K A+ L GAD + + + R ++ +D V ++ ++
Sbjct: 211 PATVIALDVKEEKLKLAERL-GADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVD 269
Query: 264 PILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNIT 323
LL G L +VG P+ +I + S +GS+ G E E++ + + +
Sbjct: 270 YTPYLLGRMGRLIIVGYG-GELRFPTIRVISSEVSFEGSLVGNYVELHELVTLALQGKVR 328
Query: 324 CNIEVIKPDQINEALDRLARNDVRYRFVI 352
+++ K D+IN+ L+RL + +V R V+
Sbjct: 329 VEVDIHKLDEINDVLERLEKGEVLGRAVL 357
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344 | Back alignment and structure |
|---|
Score = 250 bits (642), Expect = 2e-81
Identities = 76/326 (23%), Positives = 130/326 (39%), Gaps = 18/326 (5%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGI--TMYPVVPGHEITGIITKVGSNVKNFKVGDR 92
+V I+I G+C TD+ K P++ GHE G I +VG + K GD
Sbjct: 27 QGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGE-LAKVKKGDN 85
Query: 93 AAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVP 152
V + C +C++ + N C G +G G+SE ++ +
Sbjct: 86 VVVY-ATWGDLTCRYCREGKFNICKNQIIP--GQTTNG-----GFSEYMLVKSSRWLVKL 137
Query: 153 ENIAMDAAAPLLCAGITVFCPMKD-NNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHV 211
+++ AAPL AG T ++ I A+ + + G+GGL ++ KA ++
Sbjct: 138 NSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNI 197
Query: 212 TVI--STSPSKEKEAKELLGADEFILSTN---AMQMQAGKRTLDFILDTVSAKHSLGPIL 266
T++ S S A EL GAD + + +D V + + +
Sbjct: 198 TIVGISRSKKHRDFALEL-GADYVSEMKDAESLINKLTDGLGASIAIDLVGTEETTYNLG 256
Query: 267 ELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNI 326
+LL G + +VG L +F + + GS G + + ++++ + I I
Sbjct: 257 KLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSESGKIKPYI 316
Query: 327 EVIKPDQINEALDRLARNDVRYRFVI 352
+ D IN+A L V R VI
Sbjct: 317 IKVPLDDINKAFTNLDEGRVDGRQVI 342
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347 | Back alignment and structure |
|---|
Score = 245 bits (628), Expect = 3e-79
Identities = 83/334 (24%), Positives = 145/334 (43%), Gaps = 28/334 (8%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITM--------YPVVPGHEITGIITKVGSNVKN 86
V IK+ G+CH+D+H + +G PV GHEI G I +VG V
Sbjct: 24 KGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVG 83
Query: 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYR 146
+ GD AV C +C+ +E+ CD ++ GI +D G Y+E ++ +
Sbjct: 84 YSKGDLVAVNPW-QGEGNCYYCRIGEEHLCDSPRWL--GINFD-----GAYAEYVIVPHY 135
Query: 147 FVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVG-LGGLGHVAVKFGK 205
++ + AAPL C+GIT + ++ +L K + +VG GGLG +AV+ K
Sbjct: 136 KYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLD---PTKTLLVVGAGGGLGTMAVQIAK 192
Query: 206 A-FGHHVTVISTSPSKEKEAKELLGADEFILSTN-----AMQMQAGKRTLDFILDTVSAK 259
A G + + + AK GAD I ++ ++ + +D ++D +++
Sbjct: 193 AVSGATIIGVDVREEAVEAAKR-AGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSE 251
Query: 260 HSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGK 319
+L + L G +VG A + + + GS+ G + +M +
Sbjct: 252 KTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEA 311
Query: 320 YNITCNI-EVIKPDQINEALDRLARNDVRYRFVI 352
+ I + +K ++ NEA+D L R V+
Sbjct: 312 GKVKPMITKTMKLEEANEAIDNLENFKAIGRQVL 345
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345 | Back alignment and structure |
|---|
Score = 243 bits (623), Expect = 2e-78
Identities = 83/325 (25%), Positives = 138/325 (42%), Gaps = 12/325 (3%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGI--TMYPVVPGHEITGIITKVGSNVKNFKVGDR 92
G ++ +K+ G+CH+DI + P+ GHE G + ++G V F VGD
Sbjct: 24 GPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDA 83
Query: 93 AAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVP 152
AV C C C +ENYC + GI G + G +E ++ D +
Sbjct: 84 VAV-YGPWGCGACHACARGRENYCTRAADL--GITPPGLGSPGSMAEYMIVDSARHLVPI 140
Query: 153 ENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HV 211
++ AAAPL AG+T + + L ++G+GGLGHV ++ +A V
Sbjct: 141 GDLDPVAAAPLTDAGLTPYHAIS-RVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARV 199
Query: 212 TVISTSPSKEKEAKELLGADEFILSTN----AMQMQAGKRTLDFILDTVSAKHSLGPILE 267
+ + A+E +GAD + S A++ G + + D V A+ ++ +
Sbjct: 200 IAVDLDDDRLALARE-VGADAAVKSGAGAADAIRELTGGQGATAVFDFVGAQSTIDTAQQ 258
Query: 268 LLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIE 327
++ V+G +SVVG F +I SV G E E++ + + + E
Sbjct: 259 VVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTPYWGTRSELMEVVALARAGRLDIHTE 318
Query: 328 VIKPDQINEALDRLARNDVRYRFVI 352
D+ A RL +R R V+
Sbjct: 319 TFTLDEGPAAYRRLREGSIRGRGVV 343
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380 | Back alignment and structure |
|---|
Score = 167 bits (424), Expect = 1e-48
Identities = 81/338 (23%), Positives = 136/338 (40%), Gaps = 39/338 (11%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKN-----FKV 89
+ ++IL G+C +D+H + + P++ GHE G + +V ++ K
Sbjct: 41 PRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLNGELLKP 100
Query: 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITY---GGYSE-MLVADY 145
GD V C EC +CK S+E Y + Y GI S G YS +++
Sbjct: 101 GDL-IVWNRGITCGECYWCKVSKEPYLCPNRKVY-GINRGCSEYPHLRGCYSSHIVLDPE 158
Query: 146 RFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIG----IVGLGGLGHVAV 201
V+ V E +D A +C+G T + + D + G I G G LG V
Sbjct: 159 TDVLKVSEKDDLDVLAMAMCSGATAY------HAFDEYPESFAGKTVVIQGAGPLGLFGV 212
Query: 202 KFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTN--------AMQMQAGKRTLDFI 252
++ G +V VI+ SP++ K A+E +GAD + A+ R DFI
Sbjct: 213 VIARSLGAENVIVIAGSPNRLKLAEE-IGADLTLNRRETSVEERRKAIMDITHGRGADFI 271
Query: 253 LDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPL----IFGKRSVKGSMTGGMR 308
L+ +L ELL+ G SV G +P F + + + KG
Sbjct: 272 LEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVP-FKVYEWLVLKNATFKGIWVSDTS 330
Query: 309 ETQEMMNVC--GKYNITCNI-EVIKPDQINEALDRLAR 343
+ +++ ++ I + + N+AL+ +
Sbjct: 331 HFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMES 368
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370 | Back alignment and structure |
|---|
Score = 163 bits (414), Expect = 3e-47
Identities = 72/325 (22%), Positives = 131/325 (40%), Gaps = 34/325 (10%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94
G +D+ +K+ CGIC TD H + ++ T PV GHE GI+ + GS V++ G R
Sbjct: 46 GPDDLLVKVEACGICGTDRHLLHGEFPST-PPVTLGHEFCGIVVEAGSAVRDIAPGARIT 104
Query: 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPEN 154
+C C C+ + N C ++ G GG++E ++ + +P
Sbjct: 105 G-DPNISCGRCPQCQAGRVNLCRNLRAI-------GIHRDGGFAEYVLVPRKQAFEIPLT 156
Query: 155 IAMDAAA---PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFG-HH 210
+ A PL C V +L A + I+G G +G + V+ + G
Sbjct: 157 LDPVHGAFCEPLACCLHGV-------DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATT 209
Query: 211 VTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTL-------DFILDTVSAKHSLG 263
V + + +K + A+E +GA + + ++A + D +++ ++
Sbjct: 210 VILSTRQATKRRLAEE-VGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAETVK 268
Query: 264 PILELLKVNGTLSVVG--APEAPFELPSFPLIFGKRSVKGSM--TGGMRETQEMMNVCGK 319
L K GT+ ++G E+ F ++F + V GS R +++ G
Sbjct: 269 QSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPFVHRRAADLVA-TGA 327
Query: 320 YNITCNI-EVIKPDQINEALDRLAR 343
I I I D+ + + A
Sbjct: 328 IEIDRMISRRISLDEAPDVISNPAA 352
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346 | Back alignment and structure |
|---|
Score = 155 bits (393), Expect = 2e-44
Identities = 77/332 (23%), Positives = 125/332 (37%), Gaps = 45/332 (13%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++V +KI G+C +D+ + + G YP+ GHE +G I VGS V + GD A
Sbjct: 26 DEVRVKIASSGLCGSDLPRIFKN-GAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVAC- 83
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIA 156
C C C + C K F GS GG++E +V + V +P ++
Sbjct: 84 VPLLPCFTCPECLKGFYSQCAKYDFI-------GSRRDGGFAEYIVVKRKNVFALPTDMP 136
Query: 157 MDAAA---PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFG-HHVT 212
++ A P+ +L K + I+G G +G +A++ A G VT
Sbjct: 137 IEDGAFIEPITVGLHAF-------HLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVT 189
Query: 213 VISTSPSKEKEAKELLGADEFILSTN-----AMQMQAGKRTLDFILDTVSAKHSLGPILE 267
I S K AK GA + S+ + R IL+T ++ +E
Sbjct: 190 AIDISSEKLALAKS-FGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAGVPQTVELAVE 248
Query: 268 LLKVNGTLSVVGAPEAPFELPSFPL--IFGK-RSVKGS--------MTGGMRETQEMMNV 316
+ + L++VG L S I K +V GS ++
Sbjct: 249 IAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLT- 307
Query: 317 CGKYN----ITCNIEVIKPDQINEALDRLARN 344
K + I + +A+ +ARN
Sbjct: 308 ERKLSLEPLIA---HRGSFESFAQAVRDIARN 336
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 2e-43
Identities = 59/339 (17%), Positives = 115/339 (33%), Gaps = 36/339 (10%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYP-----VVPGHEITGIITKVGSNVKNFKV 89
+ I+ +Y GIC D V ++ P +V GHE G++ + F
Sbjct: 25 SYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEES---YHGFSQ 81
Query: 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVV 149
GD C C C + ++C+ +F GI G E D +++V
Sbjct: 82 GDLVMPVNR-RGCGICRNCLVGRPDFCETGEFGEAGIH----KMDGFMREWWYDDPKYLV 136
Query: 150 HVPENIAMDAA--APLLCA-------GITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVA 200
+P++I PL + +++ +VG G +G +
Sbjct: 137 KIPKSIEDIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLF 196
Query: 201 VKFGKAFGHHVTVISTSPSKEKEAKEL--LGADEFILSTNAMQMQAGKRTLDFILDTV-S 257
+ +G V + + E E + + + S +++ D I+D +
Sbjct: 197 TLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGA 256
Query: 258 AKHSLGPILELLKVNGTLSVVG-APEAPFELPSFP---LIFGKRSVKGSMTGGMRETQEM 313
+ LG ++ LL NG L + G + L ++ +++ G + G Q+
Sbjct: 257 DVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLVNGQKPHFQQA 316
Query: 314 MNV--CGKYNITCNIE-----VIKPDQINEALDRLARND 345
+ K + + + E L L +
Sbjct: 317 VVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKE 355
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348 | Back alignment and structure |
|---|
Score = 148 bits (375), Expect = 1e-41
Identities = 73/289 (25%), Positives = 120/289 (41%), Gaps = 30/289 (10%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKND-WGITM--YPVVPGHEITGIITKVGSNVKNFKVGD 91
G +V IK+L IC TD+H + + W + P + GHE+ G + ++G V+ +VGD
Sbjct: 28 GPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEGIEVGD 87
Query: 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV 151
+V C +C C+ Q + C + G T G ++E V + +
Sbjct: 88 YVSV-ETHIVCGKCYACRRGQYHVCQNTKIF-------GVDTDGVFAEYAVVPAQNIWKN 139
Query: 152 PENIAMDAAA---PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFG 208
P++I + A PL A TV L + K + I G G LG + + KA G
Sbjct: 140 PKSIPPEYATLQEPLGNAVDTV--------LAGPISGKSVLITGAGPLGLLGIAVAKASG 191
Query: 209 -HHVTVISTSPSKEKEAKELLGADEFILSTN-----AMQMQAGKRTLDFILDTVSAKHSL 262
+ V V S + + AK+ +GAD I + +D L+ A +L
Sbjct: 192 AYPVIVSEPSDFRRELAKK-VGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGAPKAL 250
Query: 263 GPILELLKVNGTLSVVGAPEAPFELPSFPLIFGK-RSVKGSMTGGMRET 310
L+ + G +S++G + LI K ++ G + ET
Sbjct: 251 EQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWET 299
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 2e-40
Identities = 74/355 (20%), Positives = 137/355 (38%), Gaps = 51/355 (14%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++V +K++ G+CHTD+ + P V GHE +GII +G NV +VGD V
Sbjct: 32 DEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTELQVGDH--VV 88
Query: 97 CLAAACMECEFCKDSQENYCDKIQFT-YNGIFWDGS--ITYGG-------------YSEM 140
C +C C YC + ++G +G+ + ++
Sbjct: 89 LSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATY 148
Query: 141 LVADYRFVVHVPENIAMDAAAPLLCAGIT----VFCPMKDNNLIDSPAKKRIGIVGLGGL 196
++ V V +++ ++ PL C T N + G G +
Sbjct: 149 ALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACI------NALKVTPASSFVTWGAGAV 202
Query: 197 GHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNA------MQMQAGKRTL 249
G A+ K G + + S+ + AK+ LGA I S ++ G +
Sbjct: 203 GLSALLAAKVCGASIIIAVDIVESRLELAKQ-LGATHVINSKTQDPVAAIKEITDG--GV 259
Query: 250 DFILDTVSAKHSLGPILELLKVNGTLSVVGAP--EAPFELPSFPLIFGKRSVKGSMTGGM 307
+F L++ + L ++ L + G ++VVGAP + L+ G +++ G + G
Sbjct: 260 NFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSG 319
Query: 308 RETQEM-------MNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIA 355
+ + GK+ ++ D+IN+A + + +I IA
Sbjct: 320 SPKKFIPELVRLYQQ--GKFPFDQLVKFYAFDEINQAAIDSRKGIT-LKPIIKIA 371
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 8e-40
Identities = 70/344 (20%), Positives = 132/344 (38%), Gaps = 49/344 (14%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITM-YPVVPGHEITGIITKVGSNVKNFKVGDRA 93
G +V +++ + H D+ K + P V G + +G++ VG V+ F GD
Sbjct: 26 GPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFAPGDE- 84
Query: 94 AVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPE 153
V +C CE C ++N C + Q G +G Y+E +V + P+
Sbjct: 85 VVINPGLSCGRCERCLAGEDNLCPRYQIL-------GEHRHGTYAEYVVLPEANLAPKPK 137
Query: 154 NIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIG----IVG-LGGLGHVAVKFGKAFG 208
N++ + AA + +T + ++D R G ++ G+ A++ K FG
Sbjct: 138 NLSFEEAAAIPLTFLTAW-----QMVVDK-LGVRPGDDVLVMAAGSGVSVAAIQIAKLFG 191
Query: 209 HHVTVISTSPSKEKEAKELLGADEFILSTN-----AMQMQAGKRTLDFILDTVSAKHSLG 263
V + S K + AK LGADE + T+ ++ G + D ++D A +
Sbjct: 192 ARVIATAGSEDKLRRAKA-LGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTGALY-FE 249
Query: 264 PILELLKVNGTLSVVGA---PEAPFELPSFPLIFGKR-SVKGSMTGGMRETQEMMNVCGK 319
+++ G +++ GA E +F ++ S+ GS ++ +
Sbjct: 250 GVIKATANGGRIAIAGASSGYEGTLPF---AHVFYRQLSILGSTMASKSRLFPILRFVEE 306
Query: 320 YNITCNIEVIKP--------DQINEALDRLARNDVRYRFVIDIA 355
+KP + E L V + V+ +
Sbjct: 307 GK-------LKPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQVG 343
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 5e-39
Identities = 58/288 (20%), Positives = 108/288 (37%), Gaps = 29/288 (10%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKND-WGITM--YPVVPGHEITGIITKVGSNVKNFKVGD 91
G ++ +++ IC TD+H K D W P+V GHE +G++ VG V+ +VGD
Sbjct: 24 GPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGD 83
Query: 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV 151
++ C C C+ + C Q G GG++E +V
Sbjct: 84 HVSLES-HIVCHACPACRTGNYHVCLNTQIL-------GVDRDGGFAEYVVVPAENAWVN 135
Query: 152 PENIAMDAAA---PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFG 208
P+++ + AA P A + + K + I G G +G +A +A G
Sbjct: 136 PKDLPFEVAAILEPFGNA-------VHTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASG 188
Query: 209 -HHVTVISTSPSKEKEAKELLGADEFILSTN----AMQMQAGKRTLDFILDTVSAKHSLG 263
+ V +P + A+ AD + + + ++ +L+ + ++
Sbjct: 189 AGPILVSDPNPYRLAFARPY--ADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNEAAIH 246
Query: 264 PILELLKVNGTLSVVGAPEAPFELPSFPLIFGK-RSVKGSMTGGMRET 310
L L G ++G P P + + + G + +T
Sbjct: 247 QGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQT 294
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 1e-38
Identities = 68/285 (23%), Positives = 119/285 (41%), Gaps = 32/285 (11%)
Query: 35 GVNDVTIKILYCGICHTDIH---HVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGD 91
++V +++ Y GIC +D+H H + I P+V GHE +G + KVG NVK+ K GD
Sbjct: 27 KEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGD 86
Query: 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITY-GGYSEMLVADYRFVVH 150
R AV C C+FCK+ + N C + F + G + V F
Sbjct: 87 RVAVEP-GVPCRRCQFCKEGKYNLCPDLTFC-------ATPPDDGNLARYYVHAADFCHK 138
Query: 151 VPENIAMDAAA---PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAF 207
+P+N++++ A PL + + ++G G +G V+V KA+
Sbjct: 139 LPDNVSLEEGALLEPLSVG-------VHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAY 191
Query: 208 GHHVTVISTSPSKEKEAKELLGADEFI--------LSTNAMQMQAGK-RTLDFILDTVSA 258
G V + SP + + AK GAD + S+ ++++ + +D
Sbjct: 192 GAFVVCTARSPRRLEVAKN-CGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGN 250
Query: 259 KHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSM 303
+ + + + + GTL +VG +P + +K
Sbjct: 251 EKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVF 295
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 1e-37
Identities = 74/363 (20%), Positives = 131/363 (36%), Gaps = 51/363 (14%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDW-------GITMYPVVPGHEITGIITKVGSNV--- 84
++ IK+ CGIC +D+H + D G+T +PV GHE +G++ + G
Sbjct: 54 KPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINR 113
Query: 85 ---KNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEML 141
K F++G+ + C C C + N+C+ + G G ++E +
Sbjct: 114 RTNKRFEIGEPVCAEEM-LWCGHCRPCAEGFPNHCENLNEL-------GFNVDGAFAEYV 165
Query: 142 VADYRFVVHVPE-------NIAMDAAA---PLLCAGITVFCPMKDNNLIDSPAKKRIGIV 191
D ++ + E + A + P A V D+ I+
Sbjct: 166 KVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVV-----IL 220
Query: 192 GLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTN-----AMQMQAG 245
G G +G AV K G V + S + AKE LGAD I T A+
Sbjct: 221 GGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKE-LGADHVIDPTKENFVEAVLDYTN 279
Query: 246 KRTLDFILDTVSAKHSLGPILELLK-----VNGTLSVVGAPEAPFELPSFPLIFGKRSVK 300
L+ + P +E + +N T+++V +A L + +
Sbjct: 280 GLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIV 339
Query: 301 GSMTGGMRETQEMM--NVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDIAGG 357
GS T + + ++T I + + ++I E + RL + + + G
Sbjct: 340 GSQGHSGHGTFPRVISLMASGMDMTKIISKTVSMEEIPEYIKRLQTDKSLVKVTMLNEGH 399
Query: 358 ARE 360
Sbjct: 400 HHH 402
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373 | Back alignment and structure |
|---|
Score = 136 bits (346), Expect = 2e-37
Identities = 85/355 (23%), Positives = 132/355 (37%), Gaps = 54/355 (15%)
Query: 39 VTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCL 98
V IKI+ +CHTD + + +PV+ GH GI+ VG V K GD +
Sbjct: 34 VRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLKAGDT-VIPLY 92
Query: 99 AAACMECEFCKDSQENYCDKIQFT-YNGIFWDGS--ITYGG-----------YSEMLVAD 144
C EC+FC + + N C KI+ T G+ DG+ T G +SE V
Sbjct: 93 IPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVA 152
Query: 145 YRFVVHVPENIAMDAAAPLLCAGIT----VFCPMKDNNLIDSPAKKRIGIVGLGGLGHVA 200
V + +D L C T N + GLGG+G
Sbjct: 153 DISVAKIDPLAPLDKVCLLGCGISTGYGAAV------NTAKLEPGSVCAVFGLGGVGLAV 206
Query: 201 VKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNA--------MQMQAGKRTLDF 251
+ K G + + + K AKE GA E I + ++M G +D+
Sbjct: 207 IMGCKVAGASRIIGVDINKDKFARAKE-FGATECINPQDFSKPIQEVLIEMTDG--GVDY 263
Query: 252 ILDTVSAKHSLGPILELLKVNGTLSV---VGAPEAPFELPSFPLIFGKRSVKGSMTGGMR 308
+ + + LE +SV V A F L+ G R+ KG+ GG +
Sbjct: 264 SFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTG-RTWKGTAFGGWK 322
Query: 309 ETQEMMNVCGKYN---------ITCNIEVIKPDQINEALDRLARNDVRYRFVIDI 354
+ + + +Y +T + D+IN+A + + R V+ I
Sbjct: 323 SVESVPKLVSEYMSKKIKVDEFVT---HNLSFDEINKAFELMHSGKS-IRTVVKI 373
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374 | Back alignment and structure |
|---|
Score = 136 bits (346), Expect = 3e-37
Identities = 84/353 (23%), Positives = 137/353 (38%), Gaps = 47/353 (13%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
N++ IKI+ G+CHTD++H+ +PVV GHE GI+ VG V F+ G++ +
Sbjct: 34 NEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQPGEK-VIP 92
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTY-NGIFWDGS--ITYGG-----------YSEMLV 142
+ C EC FC+ + N C K + T G +S+ V
Sbjct: 93 LFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTV 152
Query: 143 ADYRFVVHVPENIAMDAAAPLLCAGIT----VFCPMKDNNLIDSPAKKRIGIVGLGGLGH 198
+ V + + +D L C T N + GLG +G
Sbjct: 153 VNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAV------NTAKVEPGSTCAVFGLGAVGL 206
Query: 199 VAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTN---AMQMQAGKRT---LDF 251
AV + G + + +P K ++AK GA +F+ + + K T +DF
Sbjct: 207 AAVMGCHSAGAKRIIAVDLNPDKFEKAKV-FGATDFVNPNDHSEPISQVLSKMTNGGVDF 265
Query: 252 ILDTVSAKHSLGPILELL-KVNGTLSVVG-APEAPFELPSFPLIFGKRSVKGSMTGGMRE 309
L+ V + LE K G +VG LI G R+ KGSM GG +
Sbjct: 266 SLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAG-RTWKGSMFGGFKG 324
Query: 310 TQEM-------MNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354
+ ++ K + I + + +N+A+D + R V+ +
Sbjct: 325 KDGVPKMVKAYLD--KKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVLSL 374
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 5e-37
Identities = 76/348 (21%), Positives = 133/348 (38%), Gaps = 54/348 (15%)
Query: 39 VTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCL 98
V I+++ +C TDI+ ++PVV GHE GI+ VG V NFK GD+ +
Sbjct: 36 VRIQVIATCVCPTDINATDPKKK-ALFPVVLGHECAGIVESVGPGVTNFKPGDK-VIPFF 93
Query: 99 AAACMECEFCKDSQENYCDKIQF-----TYNGIFWDGS--ITYGG-----------YSEM 140
A C C+ C N C K++ + D + T G +S+
Sbjct: 94 APQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQY 153
Query: 141 LVADYRFVVHVPENIAMDAAAPLLCAGIT----VFCPMKDNNLIDSPAKKRIGIVGLGGL 196
V + V + ++ + C + N + GLG +
Sbjct: 154 TVVSEANLARVDDEANLERVCLIGCGFSSGYGAAI------NTAKVTPGSTCAVFGLGCV 207
Query: 197 GHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNA--------MQMQAGKR 247
G A+ K G + I + K +AK LGA + + ++ AG
Sbjct: 208 GLSAIIGCKIAGASRIIAIDINGEKFPKAKA-LGATDCLNPRELDKPVQDVITELTAG-- 264
Query: 248 TLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGG 306
+D+ LD +L ++ + G+ +VVGA +P+ +I G RS+ G+ GG
Sbjct: 265 GVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILG-RSINGTFFGG 323
Query: 307 MRETQEM-------MNVCGKYNITCNI-EVIKPDQINEALDRLARNDV 346
+ + N K+++ + + + IN+A+D +
Sbjct: 324 WKSVDSVPNLVSDYKN--KKFDLDLLVTHALPFESINDAIDLMKEGKS 369
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 2e-36
Identities = 70/286 (24%), Positives = 116/286 (40%), Gaps = 31/286 (10%)
Query: 33 ENGVNDVTIKILYCGICHTDIHHVKND-WG--ITMYPVVPGHEITGIITKVGSNVKNFKV 89
E G N+V +++ GIC +D+H+ + G I P+V GHE +G + KVGS+VK+ K
Sbjct: 28 EPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKP 87
Query: 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITY-GGYSEMLVADYRFV 148
GDR A+ A EFCK + N I F + G + F
Sbjct: 88 GDRVAIEP-GAPRENDEFCKMGRYNLSPSIFFC-------ATPPDDGNLCRFYKHNAAFC 139
Query: 149 VHVPENIAMDAAA---PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGK 205
+P+N+ + A PL ++ + G G +G V + K
Sbjct: 140 YKLPDNVTFEEGALIEPLSVGIHAC-------RRGGVTLGHKVLVCGAGPIGMVTLLVAK 192
Query: 206 AFG-HHVTVISTSPSKEKEAKELLGADEFILSTN------AMQMQAGK-RTLDFILDTVS 257
A G V V S ++ +AKE +GAD + + A +++ + ++
Sbjct: 193 AMGAAQVVVTDLSATRLSKAKE-IGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTG 251
Query: 258 AKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSM 303
A+ S+ + + GTL +VG +P + +KG
Sbjct: 252 AEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVF 297
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363 | Back alignment and structure |
|---|
Score = 133 bits (338), Expect = 3e-36
Identities = 75/328 (22%), Positives = 131/328 (39%), Gaps = 45/328 (13%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITM-YPVVPGHEITGIITKVGSNVKNFKVGDRA 93
G +D+ ++ L + + D ++ G+ + +P VP +++G++ VG +V F+ GDR
Sbjct: 52 GEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSVTRFRPGDR- 110
Query: 94 AVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPE 153
+ A ++ + + + G G SE +V + V P+
Sbjct: 111 VISTFAPGWLDGLRPGTGRTPAYETL----------GGAHPGVLSEYVVLPEGWFVAAPK 160
Query: 154 NIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIG----IVGLGGLGHVAVKFGKAFGH 209
++ A+ L CAG+T + L++ R G + G GG+ ++ KA G
Sbjct: 161 SLDAAEASTLPCAGLTAW-----FALVE-KGHLRAGDRVVVQGTGGVALFGLQIAKATGA 214
Query: 210 HVTVISTSPSKEKEAKELLGADEFILSTN-----AMQMQAGKRTLDFILDTVSAKHSLGP 264
V V S+S K A LGAD I + G R D IL+ LG
Sbjct: 215 EVIVTSSSREKLDRAFA-LGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAG-LGQ 272
Query: 265 ILELLKVNGTLSVVGAPEAPFELPSFPLIFGKR-SVKGSMTGGMRETQEMMNVCGKYNIT 323
L+ + +G +SV+G E + K V+G G R ++++ +
Sbjct: 273 SLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALEDLVGAVDRLG-- 330
Query: 324 CNIEVIKP--------DQINEALDRLAR 343
+KP ++ EAL L R
Sbjct: 331 -----LKPVIDMRYKFTEVPEALAHLDR 353
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 2e-34
Identities = 77/346 (22%), Positives = 131/346 (37%), Gaps = 54/346 (15%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
++V IK++ GIC +D H V +T PV+ GHE GI+ +G V + GD+ +
Sbjct: 34 HEVRIKMVATGICRSDDHVVSGT-LVTPLPVIAGHEAAGIVESIGEGVTTVRPGDK-VIP 91
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTY-NGIFWDGS--ITYGG-----------YSEMLV 142
C +C CK + N+C K + G DG+ T G +S+ V
Sbjct: 92 LFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTV 151
Query: 143 ADYRFVVHVPENIAMDAAAPLLCAGIT----VFCPMKDNNLIDSPAKKRIGIVGLGGLGH 198
D V + ++ + C T + + GLGG+G
Sbjct: 152 VDEISVAKIDAASPLEKVCLIGCGFSTGYGSAV------KVAKVTQGSTCAVFGLGGVGL 205
Query: 199 VAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNA--------MQMQAGKRTL 249
+ KA G + + + K +AKE +GA E + + +M G +
Sbjct: 206 SVIMGCKAAGAARIIGVDINKDKFAKAKE-VGATECVNPQDYKKPIQEVLTEMSNGG--V 262
Query: 250 DFILDTVSAKHSLGPILELLKVNGTLSV---VGAPEAPFELPSFPLIFGKRSVKGSMTGG 306
DF + + ++ L + +SV V + L+ G R+ KG++ GG
Sbjct: 263 DFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSG-RTWKGAIFGG 321
Query: 307 MRETQEMMNVCGKYN---------ITCNIEVIKPDQINEALDRLAR 343
+ + + + IT V+ ++INE D L
Sbjct: 322 FKSKDSVPKLVADFMAKKFALDPLIT---HVLPFEKINEGFDLLRS 364
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 3e-34
Identities = 52/329 (15%), Positives = 101/329 (30%), Gaps = 36/329 (10%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITM---YPVVPGHEITGIITKVGSNVKNFKVGDR- 92
+ ++ L G+C TD + G +V GHE G++ V N + GD
Sbjct: 26 GEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVGVV--VDPNDTELEEGDIV 83
Query: 93 AAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVP 152
A E+ + Q + + GI +G SE + +++V +P
Sbjct: 84 VPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVG----AHGYMSEFFTSPEKYLVRIP 139
Query: 153 ENIAMDAAA--PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH 210
+ A P+ + + D ++G G LG + + K
Sbjct: 140 RSQAELGFLIEPISITEKALEHAYASRSAFDWDP-SSAFVLGNGSLGLLTLAMLKVDDKG 198
Query: 211 VTVIST------SPSKEKEAKELLGADEFILSTNAM-QMQAGKRTLDFILDTVSAKHSLG 263
+ +E L A + + +DFI +
Sbjct: 199 YENLYCLGRRDRPDPTIDIIEE-LDATYVDSRQTPVEDVPDVYEQMDFIYEATGFPKHAI 257
Query: 264 PILELLKVNGTLSVVGAP-----EAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNV-- 316
++ L NG +++G P E ++ +++ GS+ + +
Sbjct: 258 QSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSHVEHFEAATVTFT 317
Query: 317 -CGKYN----ITCNIEVIKPDQINEALDR 340
K+ +T V + A D
Sbjct: 318 KLPKWFLEDLVT---GVHPLSEFEAAFDD 343
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 3e-34
Identities = 80/344 (23%), Positives = 134/344 (38%), Gaps = 50/344 (14%)
Query: 39 VTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCL 98
V IKIL GIC +D +K + +PV+ GHE G++ +G+ V K GD+ +
Sbjct: 37 VRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVESIGAGVTCVKPGDK-VIPLF 94
Query: 99 AAACMECEFCKDSQENYCDKIQFT-YNGIFWDGS--ITYGG-----------YSEMLVAD 144
C C CK S N+C+K G+ D + T G ++E V
Sbjct: 95 VPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVA 154
Query: 145 YRFVVHVPENIAMDAAAPLLCAGIT-----VFCPMKDNNLIDSPAKKRIGIVGLGGLGHV 199
V + +++ L+ G N + GLGG+G
Sbjct: 155 DIAVAKIDPKAPLESC--LIGCGFATGYGAAV------NTAKVTPGSTCAVFGLGGVGFS 206
Query: 200 AVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNA--------MQMQAGKRTLD 250
A+ KA G + + T K +A E LGA E + + + G +D
Sbjct: 207 AIVGCKAAGASRIIGVGTHKDKFPKAIE-LGATECLNPKDYDKPIYEVICEKTNG--GVD 263
Query: 251 FILDTVSAKHSLGPILELLKVNGTLSV---VGAPEAPFELPSFPLIFGKRSVKGSMTGGM 307
+ ++ ++ L+ ++V + +P L L+ G RS+KGS+ GG
Sbjct: 264 YAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTG-RSLKGSVFGGF 322
Query: 308 --RETQEMMNVC--GKYNITCNI-EVIKPDQINEALDRLARNDV 346
E +++ K N+ + + DQIN+A + L+
Sbjct: 323 KGEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG 366
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 3e-34
Identities = 58/367 (15%), Positives = 110/367 (29%), Gaps = 77/367 (20%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMY------------------PVVPGHEITGI 76
++V + ++ I + + + T + V G + +G+
Sbjct: 61 APDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATRHDQPYHVLGSDCSGV 120
Query: 77 ITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGG 136
+ + G V+ +K GD V A E E + + W +GG
Sbjct: 121 VVRTGIGVRRWKPGDHVIVHP--AHVDEQEPATHGDGMLGTEQR------AWGFETNFGG 172
Query: 137 YSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLID-SPAKKRIG----IV 191
+E V ++ P ++ + AA T + L+ A+ + G I
Sbjct: 173 LAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAY-----RMLVSDRGAQMKQGDIVLIW 227
Query: 192 GL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI---------------- 234
G GGLG A++F K G + +S KE + LG D I
Sbjct: 228 GASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA-LGCDLVINRAELGITDDIADDPR 286
Query: 235 ------LSTNAMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-FEL 287
+ ++ R D + + G + + + GT+ G+
Sbjct: 287 RVVETGRKLAKLVVEKAGREPDIVFEHTGRVT-FGLSVIVARRGGTVVTCGSSSGYLHTF 345
Query: 288 PSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIEVIKP--------DQINEALD 339
+ L + + GS E Q + + P + EA
Sbjct: 346 DNRYLWMKLKKIVGSHGANHEEQQATNRLFESGA-------VVPAMSAVYPLAEAAEACR 398
Query: 340 RLARNDV 346
+ +
Sbjct: 399 VVQTSRQ 405
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 4e-34
Identities = 61/324 (18%), Positives = 109/324 (33%), Gaps = 38/324 (11%)
Query: 1 MAQTTPNHTQSVVGWAAHDPSGKITPYIFKRREN----GVNDVTIKILYCGICHTDIHHV 56
MA + V HD + + +VT+ + GIC +D+H
Sbjct: 1 MASSASKTNIGVFTNPQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFW 60
Query: 57 KND-WG--ITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQE 113
K+ G I V GHE G + V +VK+ KVGDR A+ C CE C +
Sbjct: 61 KHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVAI-EPQVICNACEPCLTGRY 119
Query: 114 NYCDKIQFTYNGIFWDGSITY-GGYSEMLVADYRFVVHVPENIAMDAAA---PLLCAGIT 169
N C+++ F + G + + + N++ + A PL A
Sbjct: 120 NGCERVDFL-------STPPVPGLLRRYVNHPAVWCHKIG-NMSYENGAMLEPLSVALAG 171
Query: 170 VFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELL 228
+ + I G G +G + + KA G + + + K AKE +
Sbjct: 172 L-------QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-I 223
Query: 229 GADEFILSTN---------AMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVG 279
+ + G L+ + S+ + +K G + V+G
Sbjct: 224 CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIG 283
Query: 280 APEAPFELPSFPLIFGKRSVKGSM 303
+ ++P + ++
Sbjct: 284 VGKNEIQIPFMRASVREVDLQFQY 307
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 1e-32
Identities = 57/368 (15%), Positives = 121/368 (32%), Gaps = 63/368 (17%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGIT------------------MYPVVPGHEITGI 76
G + + ++ + + +H + T + V G ++ G+
Sbjct: 69 GPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLPYHVIGSDLAGV 128
Query: 77 ITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGG 136
+ + G V ++ GD C + +E + W +GG
Sbjct: 129 VLRTGPGVNAWQAGDEVVAHC-LSVELESSDG-------HNDTMLDPEQRIWGFETNFGG 180
Query: 137 YSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLID-SPAKKRIG----IV 191
+E+ + ++ P++++ + AA T + L+ + A + G I
Sbjct: 181 LAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAY-----RQLVSRNGAGMKQGDNVLIW 235
Query: 192 GL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQA------ 244
G GGLG A +F A G + + +SP K + + +GA+ I
Sbjct: 236 GASGGLGSYATQFALAGGANPICVVSSPQKAEICRA-MGAEAIIDRNAEGYRFWKDENTQ 294
Query: 245 ----------------GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-FEL 287
G +D + + + G + + + GT++ + E
Sbjct: 295 DPKEWKRFGKRIRELTGGEDIDIVFEHPGRET-FGASVFVTRKGGTITTCASTSGYMHEY 353
Query: 288 PSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDV 346
+ L + + GS RE E + K I + +V + +A + RN
Sbjct: 354 DNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLH 413
Query: 347 RYRFVIDI 354
+ + +
Sbjct: 414 QGKVGVLC 421
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 1e-27
Identities = 60/361 (16%), Positives = 113/361 (31%), Gaps = 72/361 (19%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94
+ V +++ I +D G + G + VGS+V + +VGDR
Sbjct: 35 PRDQVYVRVEAVAINPSDTSMRG---QFATPWAFLGTDYAGTVVAVGSDVTHIQVGDRV- 90
Query: 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPEN 154
+ + G +S+ V R +P+
Sbjct: 91 --------------------------YGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKG 124
Query: 155 IAMDAAAPLLCAGITVFCPMKDNNL--------IDSPAKKRIGIV---GLGGLGHVAVKF 203
++ + AA L T MK L K + ++ G V ++
Sbjct: 125 LSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQM 184
Query: 204 GKAFGHHVTVISTSPSKEKEAKELLGADEFI--LSTNAMQM--QAGKRTLDFILDTVSAK 259
+ G+ + + SP AK GA+E + N Q K L + LD ++
Sbjct: 185 LRLSGYIP-IATCSPHNFDLAKS-RGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNV 242
Query: 260 HSLGPILELL-KVNGTL-SVVGAPEAPFELPSF-------PLIFGKRSVKGSMTG--GMR 308
S + + G S+ PE P IFG+ S + G G
Sbjct: 243 ESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSE 302
Query: 309 ETQEMMNVCGKYNITCNIE--VIKP----------DQINEALDRLARNDVR-YRFVIDIA 355
E ++ + +E + D I + ++ + + ++ + V+ +
Sbjct: 303 EERQFGEDLWRI-AGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLE 361
Query: 356 G 356
G
Sbjct: 362 G 362
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 2e-26
Identities = 44/254 (17%), Positives = 93/254 (36%), Gaps = 56/254 (22%)
Query: 65 YPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYN 124
VPG + G+I KVG+ V + +G R
Sbjct: 58 NGHVPGVDGAGVIVKVGAKVDSKMLGRR-------------------------------- 85
Query: 125 GIFWDGSIT-YGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDS- 182
+ + S+ +G ++E V + V+ +P+N++ + AA L C +T + +
Sbjct: 86 -VAYHTSLKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAW------QAFEKI 138
Query: 183 --PAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240
++ + IVG G + ++ + G+ V ++S + + A + G + +
Sbjct: 139 PLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAK-RGVRHLYREPSQV 196
Query: 241 QMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTL-SVVGAPEAPFELPSFPLIFGKRSV 299
+ I D V++++ ++ LK NG + + AP + P S
Sbjct: 197 TQK-----YFAIFDAVNSQN-AAALVPSLKANGHIICIQDRIPAPID----PAFTRTISY 246
Query: 300 KGSMTGGMRETQEM 313
G + + +
Sbjct: 247 HEIALGALHDFGDR 260
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 2e-24
Identities = 69/324 (21%), Positives = 119/324 (36%), Gaps = 69/324 (21%)
Query: 66 PVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNG 125
P V G + G++ VG+ V F GD
Sbjct: 60 PRVLGFDAIGVVESVGNEVTMFNQGDI--------------------------------- 86
Query: 126 IFWDGSITYGG-YSEMLVADYRFVVHVPENIAMDAAA--PLLCAGITV----FCPMKDNN 178
+++ GS G +E + + R V P+NI+ + A PL GIT F +
Sbjct: 87 VYYSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPL--TGITAYETLFDVFGISR 144
Query: 179 LIDSPAKKRIGIV-GLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEA--KELLGADEFIL 235
+ K + I+ G GG+G +A + KA+G + VI+T+ E K+ +GAD +
Sbjct: 145 NRNENEGKTLLIINGAGGVGSIATQIAKAYG--LRVITTASRNETIEWTKK-MGADIVLN 201
Query: 236 --STNAMQMQA-GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPL 292
+ Q + G +D++ T + +++L+K G ++ + A E +L L
Sbjct: 202 HKESLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFENDQDLN--AL 259
Query: 293 IFGKRSVKGSM--------TGGMRETQEMMNVCGKY--------NITCNIEVIKPDQINE 336
S T M + E + T IE + + I +
Sbjct: 260 KPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQPTTTKVIEGLTTENIYQ 319
Query: 337 ALDRLARNDVRYRFVIDIAGGARE 360
A L N + + VI++ G
Sbjct: 320 AHQILESNTMIGKLVINLNEGHHH 343
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 2e-24
Identities = 65/348 (18%), Positives = 116/348 (33%), Gaps = 71/348 (20%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITM-YPVVPGHEITGIITKVGSNVKNFKVGDRA 93
+DV +K+L I +DI+ ++ ++G+ P V G+E + VGSNV K GD
Sbjct: 53 RGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWV 112
Query: 94 AVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPE 153
+ G + V ++ VP
Sbjct: 113 IPA----------------------------------NAGLGTWRTEAVFSEEALIQVPS 138
Query: 154 NIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIG---IV--GLGGLGHVAVKFGKAFG 208
+I + +AA L T + L+D + + G I G+G ++ A G
Sbjct: 139 DIPLQSAATLGVNPCTAYR-----MLMDF-EQLQPGDSVIQNASNSGVGQAVIQIAAALG 192
Query: 209 HHV-TVISTSPSKEKEAKEL--LGADEFILSTNAMQMQA-----GKRTLDFILDTVSAKH 260
V+ P +K + L LGA+ I + + L+ V K
Sbjct: 193 LRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGK- 251
Query: 261 SLGPILELLKVNGTLSVVGAP-EAPFELPSFPLIFGKRSVKG------SMTGGMRETQEM 313
S +L L GT+ G + P LIF ++G + +E+
Sbjct: 252 SSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKEL 311
Query: 314 MN------VCGKYNITCNIEVIKP-DQINEALDRLARNDVRYRFVIDI 354
+ G+ +T P AL+ + + + ++ +
Sbjct: 312 ILTLCDLIRRGQ--LTAPACSQVPLQDYQSALEASMKPFISSKQILTM 357
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 4e-24
Identities = 63/354 (17%), Positives = 122/354 (34%), Gaps = 74/354 (20%)
Query: 35 GVNDVTIKI---LYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGD 91
VN + + + + + +P+ G +++G++ + G +VK FK GD
Sbjct: 61 SVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGD 120
Query: 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV 151
+ G SE +V V H
Sbjct: 121 EV-WAAV-------------------------------PPWKQGTLSEFVVVSGNEVSHK 148
Query: 152 PENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAK--KRIGIVG-LGGLGHVAVKFGKAFG 208
P+++ AA L +T + + ++ KR+ I+G GG+G A++ KA+
Sbjct: 149 PKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWD 208
Query: 209 HHVTVISTSPSKEKEAKELLGADEFI--LSTNAMQMQAGKRTLDFILDTVSAKHSLGPIL 266
HVT S + ++ LGAD+ I S + + + DFILD V +
Sbjct: 209 AHVTA-VCSQDASELVRK-LGADDVIDYKSGSVEEQLKSLKPFDFILDNV-GGSTETWAP 265
Query: 267 ELLKVNGTLSVVGAPE----------APFELPSFPLIFGKRSVKGSMTGG------MRET 310
+ LK + V + + G +++K G +
Sbjct: 266 DFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMAS 325
Query: 311 QEMMNVCGKYNITCNIE--VIKP--------DQINEALDRLARNDVRYRFVIDI 354
++ + ++ I+P ++ EA ++ R R + VI++
Sbjct: 326 GPCLDDIAEL-----VDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV 374
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352 | Back alignment and structure |
|---|
Score = 97.2 bits (243), Expect = 6e-23
Identities = 57/307 (18%), Positives = 108/307 (35%), Gaps = 55/307 (17%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
D ++ L C +DIH V + ++ GHE G + +VGS VK+FK GDR V
Sbjct: 25 FDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVP 84
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSE-MLV--ADYRFVVHVPE 153
+ + + + ++ G + E V AD + H+P+
Sbjct: 85 A-ITPDWRTSEVQRGYHQHSGGM----LAGWKFSNVKDGVFGEFFHVNDADMN-LAHLPK 138
Query: 154 NIAMDAAAPL-----------LCAGI----TVFCPMKDNNLIDSPAKKRIGIVGLGGLGH 198
I ++AA + A I TV ++G+G +G
Sbjct: 139 EIPLEAAVMIPDMMTTGFHGAELANIKLGDTV------------------CVIGIGPVGL 180
Query: 199 VAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNA------MQMQAGKRTLDF 251
++V G + + + A E GA + I N ++ G + +D
Sbjct: 181 MSVAGANHLGAGRIFAVGSRKHCCDIALE-YGATDIINYKNGDIVEQILKATDG-KGVDK 238
Query: 252 ILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELP----SFPLIFGKRSVKGSMTGGM 307
++ H+ ++++K + V + + + G + + G + G
Sbjct: 239 VVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGG 298
Query: 308 RETQEMM 314
R E +
Sbjct: 299 RLRMERL 305
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321 | Back alignment and structure |
|---|
Score = 96.1 bits (240), Expect = 1e-22
Identities = 60/337 (17%), Positives = 111/337 (32%), Gaps = 65/337 (19%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMY-----PVVPGHEITGIITKVGSNVKNFKV 89
N + IK+ + D + P G++ +G + ++GS+V N +
Sbjct: 32 RKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGSDVNNVNI 91
Query: 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVV 149
GD+ V G Y+E + A ++
Sbjct: 92 GDK--V-------------------------MGIAGFPDHP----CCYAEYVCASPDTII 120
Query: 150 HVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVG-LGGLGHVAVKFGKAFG 208
E ++ AA L AG+T + + + I GG+GH+A++ K G
Sbjct: 121 QKLEKLSFLQAASLPTAGLTALQALNQAEV---KQGDVVLIHAGAGGVGHLAIQLAKQKG 177
Query: 209 HHVTVIST-SPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPILE 267
TVI+T S K LGA++ I + A +D ++D V ++
Sbjct: 178 --TTVITTASKRNHAFLKA-LGAEQCINYHEEDFLLAISTPVDAVIDLV-GGDVGIQSID 233
Query: 268 LLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNIE 327
LK G + V A + ++ + + E ++ GK +
Sbjct: 234 CLKETGCIVSVPTITAGRVIEVAK----QKHRRAFGL-LKQFNIEELHYLGKL-----VS 283
Query: 328 --VIKP--------DQINEALDRLARNDVRYRFVIDI 354
++ + A + L VR + V +
Sbjct: 284 EDKLRIEISRIFQLSEAVTAHELLETGHVRGKLVFKV 320
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343 | Back alignment and structure |
|---|
Score = 96.1 bits (240), Expect = 1e-22
Identities = 55/268 (20%), Positives = 86/268 (32%), Gaps = 64/268 (23%)
Query: 66 PVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNG 125
P + G ++ G + VG V +F+VGD V F G
Sbjct: 64 PAILGMDLAGTVVAVGPEVDSFRVGDA--V-------------------------FGLTG 96
Query: 126 IFWDGSITYGGYSEMLVADYRFVVHVPENIAMD--AAAPLLCAGITVFCPMKDNNLIDSP 183
G +++ D R + P + M + PL IT + L+D
Sbjct: 97 GVGGLQ---GTHAQFAAVDARLLASKPAALTMRQASVLPL--VFITAW-----EGLVD-- 144
Query: 184 AKKRIGIV---------GLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI 234
R + G GG+GHVA++ A G V + S + ++ LGA
Sbjct: 145 ---RAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFA-TARGSDLEYVRD-LGATPID 199
Query: 235 LSTN---AMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTL-SVVGAPEAPFELPSF 290
S + D + DT+ L +K G + S +G
Sbjct: 200 ASREPEDYAAEHTAGQGFDLVYDTLGGPV-LDASFSAVKRFGHVVSCLGWGTHKL----A 254
Query: 291 PLIFGKRSVKGSMTGGMRETQEMMNVCG 318
PL F + + G T E + G
Sbjct: 255 PLSFKQATYSGVFTLHTLLANEGLAHFG 282
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333 | Back alignment and structure |
|---|
Score = 94.2 bits (235), Expect = 5e-22
Identities = 58/287 (20%), Positives = 106/287 (36%), Gaps = 68/287 (23%)
Query: 35 GVNDVTIKILYCGICHTDIHH---VKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGD 91
G V ++ G+ D +H + + + P+V G E ++ +VG V +F VG+
Sbjct: 27 GPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTDFTVGE 86
Query: 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV 151
R C G YS+ + ++ V
Sbjct: 87 RVC--------------------TC--------------LPPLGAYSQERLYPAEKLIKV 112
Query: 152 PENIAMDAA--APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-----GGLGHVAVKFG 204
P+++ +D A L+ G+T L+ K + G L GG+GH+ V +
Sbjct: 113 PKDLDLDDVHLAGLMLKGMTAQ------YLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWA 166
Query: 205 KAFGHHVTVIST--SPSKEKEAKELLGADEFILSTNA------MQMQAGKRTLDFILDTV 256
+ G TVI T + K + A++ LG I + ++ GK +D + D++
Sbjct: 167 RHLG--ATVIGTVSTEEKAETARK-LGCHHTINYSTQDFAEVVREITGGKG-VDVVYDSI 222
Query: 257 SAKHSLGPILELLKVNGTLSVVGA---PEAPFELPSFPLIFGKRSVK 300
K +L L+ L+ G + G P + + + S+
Sbjct: 223 -GKDTLQKSLDCLRPRGMCAAYGHASGVADPIRVVE--DLGVRGSLF 266
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325 | Back alignment and structure |
|---|
Score = 93.8 bits (234), Expect = 6e-22
Identities = 65/282 (23%), Positives = 108/282 (38%), Gaps = 64/282 (22%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94
G V ++ G+ D ++ + P G E G++ VG V FKVGDR A
Sbjct: 27 GPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFKVGDRVA 86
Query: 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPEN 154
Y + G YSE+ V +V + ++
Sbjct: 87 --------------------YG--------------TGPLGAYSEVHVLPEANLVKLADS 112
Query: 155 IAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-----GGLGHVAVKFGKAFGH 209
++ + AA L+ G+TV L+ + + G + L GG+G +A ++ KA G
Sbjct: 113 VSFEQAAALMLKGLTVQ------YLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALG- 165
Query: 210 HVTVIST--SPSKEKEAKELLGADEFILSTNA------MQMQAGKRTLDFILDTVSAKHS 261
+I T SP K AK LGA E I ++ +++ GK+ + D V + +
Sbjct: 166 -AKLIGTVSSPEKAAHAKA-LGAWETIDYSHEDVAKRVLELTDGKK-CPVVYDGV-GQDT 221
Query: 262 LGPILELLKVNGTLSVVGA---PEAPFELPSFPLIFGKRSVK 300
L+ + G + G P + L ++ K SV
Sbjct: 222 WLTSLDSVAPRGLVVSFGNASGPVSGVNL---GILAQKDSVY 260
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327 | Back alignment and structure |
|---|
Score = 93.8 bits (234), Expect = 7e-22
Identities = 55/269 (20%), Positives = 93/269 (34%), Gaps = 61/269 (22%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94
N++ ++ GI D + + P G E GI++KVGS VK+ K GDR
Sbjct: 27 AENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVV 86
Query: 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPEN 154
Y G YS + +P
Sbjct: 87 --------------------YA--------------QSALGAYSSVHNIIADKAAILPAA 112
Query: 155 IAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-----GGLGHVAVKFGKAFGH 209
I+ + AA G+TV+ L+ + + L GG+G +A ++ KA G
Sbjct: 113 ISFEQAAASFLKGLTVY------YLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALG- 165
Query: 210 HVTVISTSPSKEKE--AKELLGADEFILSTNA------MQMQAGKRTLDFILDTVSAKHS 261
+I T + +K A + GA + I ++ GK+ + + D+V + +
Sbjct: 166 -AKLIGTVGTAQKAQSALK-AGAWQVINYREEDLVERLKEITGGKK-VRVVYDSV-GRDT 221
Query: 262 LGPILELLKVNGTLSVVGA---PEAPFEL 287
L+ L+ G + G L
Sbjct: 222 WERSLDCLQRRGLMVSFGNSSGAVTGVNL 250
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351 | Back alignment and structure |
|---|
Score = 93.8 bits (234), Expect = 9e-22
Identities = 62/285 (21%), Positives = 104/285 (36%), Gaps = 66/285 (23%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPV------VPGHEITGIITKVGSNVKNFK 88
+ V IK+ CG+ + + Y PG ++ G+I VG N FK
Sbjct: 56 KDHQVLIKVHACGVNPVETYIRSG-----TYSRKPLLPYTPGSDVAGVIEAVGDNASAFK 110
Query: 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFV 148
GDR V S GGY+E +A V
Sbjct: 111 KGDR--VFT--------------------------------SSTISGGYAEYALAADHTV 136
Query: 149 VHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIG---IV--GLGGLGHVAVKF 203
+PE + A + T + LI S A + G +V GG+G A +
Sbjct: 137 YKLPEKLDFKQGAAIGIPYFTAY-----RALIHS-ACVKAGESVLVHGASGGVGLAACQI 190
Query: 204 GKAFGHHVTVISTSPSKEK-EAKELLGADEFILSTN-----AMQMQAGKRTLDFILDTVS 257
+A+G + ++ T+ ++E + GA E ++ G++ +D I++ +
Sbjct: 191 ARAYG--LKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEML- 247
Query: 258 AKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGS 302
A +L L LL G + VVG+ E+ + + S+ G
Sbjct: 248 ANVNLSKDLSLLSHGGRVIVVGSR-GTIEINPRDTMAKESSIIGV 291
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 1e-21
Identities = 45/282 (15%), Positives = 82/282 (29%), Gaps = 55/282 (19%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIITKVGSNVK-NFKVGDR 92
G + V IK+ I +D+ +K +G + G E G I G VG R
Sbjct: 48 GPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKR 107
Query: 93 AAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVP 152
A G +G ++E VA+ + +
Sbjct: 108 VAFAT--------------------------------GLSNWGSWAEYAVAEAAACIPLL 135
Query: 153 ENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIG---IV--GLGGLGHVAVKFGKAF 207
+ + + A ++ +T + D K+ ++ G L + + K
Sbjct: 136 DTVRDEDGAAMIVNPLTAIA------MFDI-VKQEGEKAFVMTAGASQLCKLIIGLAKEE 188
Query: 208 GHHVTVISTSPSKEKEAKELLGADEFILSTN-----AMQMQAGKRTLDFILDTVSAKHSL 262
G V + K+ +GA + ++ LD V
Sbjct: 189 GFRPIVTVRRDEQIALLKD-IGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAV-TGPLA 246
Query: 263 GPILELLKVNGTLSVVGA--PEAPFELPSFPLIFGKRSVKGS 302
I + + G P+A LIF + ++G
Sbjct: 247 SAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGF 288
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 5e-21
Identities = 53/264 (20%), Positives = 92/264 (34%), Gaps = 46/264 (17%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94
+D+ +++ + D ++ V G++ GI++ VG +V F+ GD
Sbjct: 51 AGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVSAVGPDVTLFRPGDE-- 108
Query: 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGG-YSEMLVADYRFVVHVPE 153
+F+ GSI G +E + D R V P+
Sbjct: 109 -------------------------------VFYAGSIIRPGTNAEFHLVDERIVGRKPK 137
Query: 154 NIAMDAAAPLLCAGITV----FCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH 209
+ AA L IT F + N + A + + G GG+G +AV+ +
Sbjct: 138 TLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRT- 196
Query: 210 HVTVISTSPSKEKEA--KELLGADEFILSTNAMQMQAGKRTL---DFILDTVSAKHSLGP 264
+TVI+T+ E + K LGA I + + + L F+ T
Sbjct: 197 DLTVIATASRPETQEWVKS-LGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTHTDKHAAE 255
Query: 265 ILELLKVNGTL-SVVGAPEAPFEL 287
I +L+ G + L
Sbjct: 256 IADLIAPQGRFCLIDDPSAFDIML 279
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340 | Back alignment and structure |
|---|
Score = 89.9 bits (224), Expect = 2e-20
Identities = 43/296 (14%), Positives = 90/296 (30%), Gaps = 69/296 (23%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPV------VPGHEITGIITKVGSNVKNFK 88
N+V +++L I +D+ + Y +PG+E GI+ VG+ V
Sbjct: 31 KDNEVFVRMLVRPINPSDLIPITG-----AYAHRIPLPNIPGYEGVGIVENVGAFVSREL 85
Query: 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFV 148
+G R V L G + E + FV
Sbjct: 86 IGKR--VLPLRG---------------------------------EGTWQEYVKTSADFV 110
Query: 149 VHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIG---IV--GLGGLGHVAVKF 203
V +P++I AA + +T + ++ + +V +GH+ +
Sbjct: 111 VPIPDSIDDFTAAQMYINPLTAW-----VTCTET-LNLQRNDVLLVNACGSAIGHLFAQL 164
Query: 204 GKAFGHHVTVIST--SPSKEKEAKELLGADEFILSTN-----AMQMQAGKRTLDFILDTV 256
+ +I+ + +E LGA I ++ + D +D++
Sbjct: 165 SQILN--FRLIAVTRNNKHTEELLR-LGAAYVIDTSTAPLYETVMELTNGIGADAAIDSI 221
Query: 257 SAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQE 312
+ L+ NG +G ++ ++ + +
Sbjct: 222 -GGPDGNELAFSLRPNGHFLTIGLLSGI-QVNWAEIVTKAKVHANIFHLRHWNDEV 275
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 3e-20
Identities = 53/308 (17%), Positives = 95/308 (30%), Gaps = 82/308 (26%)
Query: 35 GVNDVTIKILYCGICHTDIHHVK----------NDWGITMYPVVPGHEITGIITKVGSNV 84
N+V +K L + +DI+ ++ +G T G+E + KVGSNV
Sbjct: 32 APNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNV 91
Query: 85 KNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVAD 144
+ + GD + +G + + +
Sbjct: 92 SSLEAGDWVIPS----------------------------------HVNFGTWRTHALGN 117
Query: 145 YRFVVHV-----------PENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIG---I 190
+ + P + ++ A + +T + L K G
Sbjct: 118 DDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYL-----MLTHY-VKLTPGKDWF 171
Query: 191 V---GLGGLGHVAVKFGKAFGHHV-TVISTSPSKEKEAKEL--LGADEFILSTNAMQMQA 244
+ G +G A + GK + +VI P+ ++ L LGA + I +
Sbjct: 172 IQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREF 231
Query: 245 GKRTLDF----------ILDTVSAKHSLGPILELLKVNGTLSVVGAP-EAPFELPSFPLI 293
G ++ L+ V K S I L NG + G P +P+ I
Sbjct: 232 GPTIKEWIKQSGGEAKLALNCVGGK-SSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYI 290
Query: 294 FGKRSVKG 301
F + G
Sbjct: 291 FKNFTSAG 298
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 86.1 bits (214), Expect = 4e-19
Identities = 48/309 (15%), Positives = 96/309 (31%), Gaps = 80/309 (25%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPV------VPGHEITGIITKVGSNVKNFK 88
++ I++ CG+ D+ + VPG E +GI+ +G +VK ++
Sbjct: 29 QDGELKIRVKACGLNFIDLMVRQG-----NIDNPPKTPLVPGFECSGIVEALGDSVKGYE 83
Query: 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFV 148
+GDR V Y ++E++ FV
Sbjct: 84 IGDR--VMAFVN---------------------------------YNAWAEVVCTPVEFV 108
Query: 149 VHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIG---IV--GLGGLGHVAVKF 203
+P++++ AA +T + L + A R G +V GG+G +
Sbjct: 109 YKIPDDMSFSEAAAFPMNFVTAY-----VMLFEV-ANLREGMSVLVHSAGGGVGQAVAQL 162
Query: 204 GKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN---AMQMQAGKRTLDFILDTVSAKH 260
+ + + S K + +D +LD + +
Sbjct: 163 CSTVPN--VTVFGTASTFKHEAIKDSVTHLFDRNADYVQEVKRISAEGVDIVLDCLCGDN 220
Query: 261 SLGPILELLKVNGTLSVVG--------------APEAPFELPSFPL--IFGKR-SVKGSM 303
G L LLK GT + G ++ +++ ++ + + G
Sbjct: 221 -TGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFS 279
Query: 304 TGGMRETQE 312
+ Q
Sbjct: 280 LLNLLFKQG 288
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334 | Back alignment and structure |
|---|
Score = 83.8 bits (208), Expect = 2e-18
Identities = 57/286 (19%), Positives = 97/286 (33%), Gaps = 72/286 (25%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94
++ IK Y G+ + + + K + P V G E +G + G V NF+VGD+ A
Sbjct: 34 SEEELLIKNKYTGVNYIESYFRKGIYPCEK-PYVLGREASGTVVAKGKGVTNFEVGDQVA 92
Query: 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPEN 154
+ + T+ YS++ V+ +P+
Sbjct: 93 ---------------------------------YISNSTFAQYSKISSQGP--VMKLPKG 117
Query: 155 I----AMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-----GGLGHVAVKFGK 205
AA LL +T + + + G L GG+G + + K
Sbjct: 118 TSDEELKLYAAGLL-QVLTAL------SFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLK 170
Query: 206 AFGHHVTVISTSPSKEKE--AKELLGADEFILSTNA------MQMQAGKRTLDFILDTVS 257
G I+ + + EK AKE GA+ I ++ ++ GK +D D+V
Sbjct: 171 MKG--AHTIAVASTDEKLKIAKE-YGAEYLINASKEDILRQVLKFTNGKG-VDASFDSV- 225
Query: 258 AKHSLGPILELLKVNGTLSVVGA---PEAPFELPSFPLIFGKRSVK 300
K + L LK G G PF +++
Sbjct: 226 GKDTFEISLAALKRKGVFVSFGNASGLIPPFS----ITRLSPKNIT 267
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354 | Back alignment and structure |
|---|
Score = 83.8 bits (208), Expect = 2e-18
Identities = 50/287 (17%), Positives = 95/287 (33%), Gaps = 67/287 (23%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPV------VPGHEITGIITKVGSNVK-NF 87
G +V +K+ + D+ + Y + G E +G + ++G + ++
Sbjct: 48 GEGEVLLKVAASALNRADLMQRQG-----QYDPPPGASNILGLEASGHVAELGPGCQGHW 102
Query: 88 KVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRF 147
K+GD L GG ++ +
Sbjct: 103 KIGDT--AMALLPG---------------------------------GGQAQYVTVPEGL 127
Query: 148 VVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIV----GLGGLGHVAVKF 203
++ +PE + + AA + A +T F L + V GL G+G A++
Sbjct: 128 LMPIPEGLTLTQAAAIPEAWLTAF-----QLLHLVGNVQAGDYVLIHAGLSGVGTAAIQL 182
Query: 204 GKAFGHHVTVISTSPSKEK-EAKELLGADEFILSTN-----AMQMQAGKRTLDFILDTVS 257
+ G + T+ S++K + E LGA A ++ ILD +
Sbjct: 183 TRMAGA--IPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIG 240
Query: 258 AKHSLGPILELLKVNGTLSVVGAPE-APFELPSFPLIFGKR-SVKGS 302
+ + L ++G + G P F + KR S+ S
Sbjct: 241 GSY-WEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITS 286
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353 | Back alignment and structure |
|---|
Score = 83.8 bits (208), Expect = 3e-18
Identities = 68/287 (23%), Positives = 102/287 (35%), Gaps = 69/287 (24%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPV------VPGHEITGIITKVGSNVKNFK 88
G +V ++ G+ DI + YP + G E++G I VG V +
Sbjct: 54 GEGEVLVRAEAIGVNRPDIAQRQG-----SYPPPKDASPILGLELSGEIVGVGPGVSGYA 108
Query: 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFV 148
VGD+ V LA G Y+E + +
Sbjct: 109 VGDK--VCGLANG---------------------------------GAYAEYCLLPAGQI 133
Query: 149 VHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIV----GLGGLGHVAVKFG 204
+ P+ AA L TV+ NL V G G+G A++
Sbjct: 134 LPFPKGYDAVKAAALPETFFTVW-----ANLFQMAGLTEGESVLIHGGTSGIGTTAIQLA 188
Query: 205 KAFGHHVTVISTSPSKEK-EAKELLGADEFILSTN----AMQMQAGKRTLDFILDTVSAK 259
+AFG V +T+ S K EA E LGA I + A+ + +D ILD + A
Sbjct: 189 RAFGA--EVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAA 246
Query: 260 HSLGPILELLKVNGTLSVVGA---PEAPFELPSFPLIFGKR-SVKGS 302
+ + L +G LS++ A E + I KR +V GS
Sbjct: 247 Y-FERNIASLAKDGCLSIIAFLGGAVA--EKVNLSPIMVKRLTVTGS 290
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362 | Back alignment and structure |
|---|
Score = 81.5 bits (202), Expect = 2e-17
Identities = 53/318 (16%), Positives = 89/318 (27%), Gaps = 78/318 (24%)
Query: 15 WAAHDPSGKITPYIFKRREN-----GVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVV 68
S + R+ G D+ ++ + G+ +DI++ + P
Sbjct: 27 LVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFD 86
Query: 69 PGHEITGIITKVG-SNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIF 127
G E G + +G S + VG A
Sbjct: 87 IGFEGIGEVVALGLSASARYTVGQAVA--------------------------------- 113
Query: 128 WDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKR 187
+ G ++E V VP LL +G T + +K+
Sbjct: 114 ---YMAPGSFAEYTVVPASIATPVPS--VKPEYLTLLVSGTTAYISLKE----------- 157
Query: 188 IGIV----------GLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILST 237
+G + GG G A++ K HV +S K K LG D I
Sbjct: 158 LGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-LGCDRPINYK 216
Query: 238 NAMQMQAGKRT----LDFILDTVSAKHSLGPILELLKVNGTLSVVGA-----PEAPFELP 288
K+ +D + ++V ++ L G L V+G
Sbjct: 217 TEPVGTVLKQEYPEGVDVVYESVGGAM-FDLAVDALATKGRLIVIGFISGYQTPTGLSPV 275
Query: 289 SFPLIFGKRSVKG-SMTG 305
+ K K S+ G
Sbjct: 276 KAGTLPAKLLKKSASVQG 293
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342 | Back alignment and structure |
|---|
Score = 80.3 bits (199), Expect = 4e-17
Identities = 51/273 (18%), Positives = 85/273 (31%), Gaps = 66/273 (24%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPV------VPGHEITGIITKVGSNVKNFK 88
G N V + + G+C D K Y + VPG E G++ K
Sbjct: 47 GPNVVVVDVKAAGVCFPDYLMTKG-----EYQLKMEPPFVPGIETAGVVRSAPE-GSGIK 100
Query: 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFV 148
GDR GGY+E + +
Sbjct: 101 PGDRVM-----------------------------------AFNFIGGYAERVAVAPSNI 125
Query: 149 VHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIG---IV--GLGGLGHVAVKF 203
+ P + A L+ T++ + R G +V GG+G A++
Sbjct: 126 LPTPPQLDDAEAVALIANYHTMY-----FAYARR-GQLRAGETVLVLGAAGGIGTAAIQI 179
Query: 204 GKAFGHHVTVISTSPSKEKEAKELLGADEFILST----NAMQMQAGKRTLDFILDTVSAK 259
K G V + + + K +GAD + A++ G +D ++D +
Sbjct: 180 AKGMGAKVIAVVNRTAATEFVKS-VGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGGP 238
Query: 260 HSLGPILELLKVNGTLSVVGAPEAPFELPSFPL 292
+ L G L VVG A +P+ +
Sbjct: 239 A-FDDAVRTLASEGRLLVVGF--AAGGIPTIKV 268
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 4e-17
Identities = 51/220 (23%), Positives = 87/220 (39%), Gaps = 34/220 (15%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPV--VPGHEITGIITKVGSNVKNFKVGDRAA 94
+ V +K++ IC +D H V+ G T V V GHEITG + + G +V+N ++GD +
Sbjct: 34 HGVILKVVSTNICGSDQHMVR---GRTTAQVGLVLGHEITGEVIEKGRDVENLQIGDLVS 90
Query: 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYS----EML---VADYRF 147
V AC C CK+ C + G + G + G ++ E + AD+
Sbjct: 91 VPF-NVACGRCRSCKEMHTGVCLTVNPARAGGAY-GYVDMGDWTGGQAEYVLVPYADFN- 147
Query: 148 VVHVPENIAMDAAAP--LLCAGI-------TVFCPMKDNNLIDSPAKKRIGIVGLGGLGH 198
++ +P+ + I V + + + + G G +G
Sbjct: 148 LLKLPDRDKAMEKIRDLTCLSDILPTGYHGAVTAGVGPG---ST-----VYVAGAGPVGL 199
Query: 199 VAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILST 237
A + G V V +P++ AK G + LS
Sbjct: 200 AAAASARLLGAAVVIVGDLNPARLAHAKA-QGFEIADLSL 238
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 2e-15
Identities = 50/224 (22%), Positives = 83/224 (37%), Gaps = 33/224 (14%)
Query: 26 PYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPV--VPGHEITGIITKVGSN 83
P + + V +K++ IC +D H + G + P V GHEITG + + GS+
Sbjct: 22 PKLEHNNRKLEHAVILKVVSTNICGSDQHIYR---GRFIVPKGHVLGHEITGEVVEKGSD 78
Query: 84 VKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYS----E 139
V+ +GD +V AC C CK+++ + C+ + G+S E
Sbjct: 79 VELMDIGDLVSVPF-NVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAE 137
Query: 140 ML-V--ADYRFVVHVPENIAMDAAAP--LLCAGI-------TVFCPMKDNNLIDSPAKKR 187
+ V ADY ++ + L + I V +K
Sbjct: 138 YVLVPYADYM-LLKFGDKEQAMEKIKDLTLISDILPTGFHGCVSAGVKPG---SH----- 188
Query: 188 IGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGA 230
+ I G G +G A + G V V +P + K + G
Sbjct: 189 VYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD-AGF 231
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 3e-15
Identities = 71/338 (21%), Positives = 131/338 (38%), Gaps = 59/338 (17%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGIT-MYPVVPGHEITGIITKVGSNVKNFKVGDRAAV 95
DV +++ Y + + D D I YP VPG ++ G++ V S F+ GD
Sbjct: 31 GDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVV--VSSQHPRFREGDEVIA 88
Query: 96 GCLAAACMECEFCKDSQENYCDKIQFTYNGIFWD-GSITYGGYSEMLVADYRFVVHVPEN 154
G ++ G +GGYSE ++V +P+
Sbjct: 89 ----------------------------TG--YEIGVTHFGGYSEYARLHGEWLVPLPKG 118
Query: 155 IAMDAAAPLLCAGIT-VFCPMKDNNLIDSPAKKRIGIVG-LGGLGHVAVKFGKAFGHHVT 212
+ + A + AG T + +P + + + G GG+G +AV G+ V
Sbjct: 119 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVE 178
Query: 213 VISTSPSKEKEAKELLGADEFILSTNAMQMQAG----KRTLDFILDTVSAKHSLGPILEL 268
+ ++ + LGA E +L+ + + K+ +D V +L +L
Sbjct: 179 ASTGKAAEHDYLRV-LGAKE-VLAREDVMAERIRPLDKQRWAAAVDPVGG-RTLATVLSR 235
Query: 269 LKVNGTLSVVG-APEAPFELPS--FPLI------FGKRSVKGSMTGGMRET--QEMMNVC 317
++ G ++V G E+P+ P I G SV M +R + +
Sbjct: 236 MRYGGAVAVSGLT--GGAEVPTTVHPFILRGVSLLGIDSVYCPMD--LRLRIWERLAGDL 291
Query: 318 GKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIA 355
K ++ + I ++ +AL R+ R ++R R V+ +A
Sbjct: 292 -KPDLERIAQEISLAELPQALKRILRGELRGRTVVRLA 328
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379 | Back alignment and structure |
|---|
Score = 73.0 bits (179), Expect = 2e-14
Identities = 26/242 (10%), Positives = 56/242 (23%), Gaps = 51/242 (21%)
Query: 66 PVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNG 125
+ G+E G++ + GS+ + +
Sbjct: 91 SMPVGNEGAGVVVEAGSSPAAQALMGKTV------------------------------- 119
Query: 126 IFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDS-PA 184
+I YS+ + +PE A +T ++++
Sbjct: 120 ----AAIGGAMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTAL------GMVETMRL 169
Query: 185 KKRIGIV---GLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN--- 238
+ +V LG + + G + I + K GA + +
Sbjct: 170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA-QGAVHVCNAASPTF 228
Query: 239 AMQMQA--GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGK 296
+ D G IL ++ S ++G
Sbjct: 229 MQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGG 288
Query: 297 RS 298
Sbjct: 289 LD 290
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 2e-14
Identities = 67/334 (20%), Positives = 111/334 (33%), Gaps = 54/334 (16%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGIT-MYPVVPGHEITGIITKVGSNVKNFKVGDRAAV 95
DVT+ + + + + D + I +P++PG + G + S F G +
Sbjct: 28 GDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTV--HASEDPRFHAGQEVLL 85
Query: 96 GCLAAACMECEFCKDSQENYCDKIQFTYNGIFWD-GSITYGGYSEMLVADYRFVVHVPEN 154
G W G +GG +E ++V +P
Sbjct: 86 ----------------------------TG--WGVGENHWGGLAERARVKGDWLVALPAG 115
Query: 155 IAMDAAAPLLCAGIT-VFCPMKDNNLIDSPAKKRIGIVG-LGGLGHVAVKFGKAFGHHVT 212
++ A + AG T + C M + P + + G GG+G AV G+ V
Sbjct: 116 LSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVA 175
Query: 213 VISTSPSKEKEAKELLGADEFILSTNAMQMQA--GKRTLDFILDTVSAKHSLGPILELLK 270
+S S K LGA+ ILS + K+ +DTV L +L +
Sbjct: 176 AVSGRESTHGYLKS-LGANR-ILSRDEFAESRPLEKQLWAGAIDTVGD-KVLAKVLAQMN 232
Query: 271 VNGTLSVVGAPEAPFELPS--FPLI------FGKRSVKGSMTGGMRET--QEMMNVCGKY 320
G ++ G F LP+ P I G SV R ++ +
Sbjct: 233 YGGCVAACG-LAGGFALPTTVMPFILRNVRLQGVDSVMTPPA--RRAEAWARLVKDLPES 289
Query: 321 NITCNIEVIKPDQINEALDRLARNDVRYRFVIDI 354
I + D + N V+ R ++ I
Sbjct: 290 FYAQAATEITLADAPKFADAIINNQVQGRTLVKI 323
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 3e-14
Identities = 71/338 (21%), Positives = 124/338 (36%), Gaps = 59/338 (17%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGIT-MYPVVPGHEITGIITKVGSNVKNFKVGDRAAV 95
+ V IK+ Y GI + D K I YP++ G + G + V SN F GD
Sbjct: 32 DGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTV--VSSNDPRFAEGDEVIA 89
Query: 96 GCLAAACMECEFCKDSQENYCDKIQFTYNGIFWD-GSITYGGYSEMLVADYRFVVHVPEN 154
++ G GG SE ++V +P+N
Sbjct: 90 ----------------------------TS--YELGVSRDGGLSEYASVPGDWLVPLPQN 119
Query: 155 IAMDAAAPLLCAGIT-VFCPMKDNNLIDSPAKKRIGIVG-LGGLGHVAVKFGKAFGHHVT 212
+++ A AG T + SP K + + G GG+G +AV G+ V
Sbjct: 120 LSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVV 179
Query: 213 VISTSPSKEKEAKELLGADEFILSTNAMQMQAG----KRTLDFILDTVSAKHSLGPILEL 268
+ + K+ LGA E ++S + K+ +D V L +L
Sbjct: 180 ASTGNREAADYLKQ-LGASE-VISREDVYDGTLKALSKQQWQGAVDPVGG-KQLASLLSK 236
Query: 269 LKVNGTLSVVG-APEAPFELPS--FPLI------FGKRSVKGSMTGGMRET--QEMMNVC 317
++ G+++V G E+P+ +P I G SV M +R + M +
Sbjct: 237 IQYGGSVAVSGLT--GGGEVPATVYPFILRGVSLLGIDSVYCPMD--VRAAVWERMSSDL 292
Query: 318 GKYNI-TCNIEVIKPDQINEALDRLARNDVRYRFVIDI 354
+ T + ++ AL + +N ++ R ++ +
Sbjct: 293 KPDQLLTIVDREVSLEETPGALKDILQNRIQGRVIVKL 330
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302 | Back alignment and structure |
|---|
Score = 68.3 bits (168), Expect = 4e-13
Identities = 48/289 (16%), Positives = 81/289 (28%), Gaps = 91/289 (31%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPV------VPGHEITGIITKVGSNVKNFK 88
+V +++ G+ D Y +PG E+ G++
Sbjct: 24 EEGEVVLRVEAVGLNFADHLMRLG-----AYLTRLHPPFIPGMEVVGVV----------- 67
Query: 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFV 148
G R L GG +E + +
Sbjct: 68 EGRR--YAALVP---------------------------------QGGLAERVAVPKGAL 92
Query: 149 VHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIV---------GLGGLGHV 199
+ +PE ++ + AA + +T + L KR G LG
Sbjct: 93 LPLPEGLSPEEAAAFPVSFLTAY-----LAL------KRAQARPGEKVLVQAAAGALGTA 141
Query: 200 AVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAK 259
AV+ +A G V ++ P K LGA+E + LD +L+
Sbjct: 142 AVQVARAMGLRVLAAASRPEKLALPLA-LGAEEAATYAEVPERAKAWGGLDLVLEVRGK- 199
Query: 260 HSLGPILELLKVNGTLSVVG-----APEAPFELPSFPLIFGKR-SVKGS 302
+ L LL G L +G P + + +V G
Sbjct: 200 -EVEESLGLLAHGGRLVYIGAAEGEVAPIP-----PLRLMRRNLAVLGF 242
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 3e-10
Identities = 41/229 (17%), Positives = 72/229 (31%), Gaps = 69/229 (30%)
Query: 31 RRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVG 90
G +V I + G+ D G+ G E G++ + G V G
Sbjct: 233 TAPLGDGEVRIAMRAAGVNFRDALIAL---GMYPGVASLGSEGAGVVVETGPGVTGLAPG 289
Query: 91 DRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVH 150
DR V + + + VAD+R V
Sbjct: 290 DR--VMGMIP----------------------------------KAFGPLAVADHRMVTR 313
Query: 151 VPENIAMDAAAPLLCAGITVFCPMKD--------NNLIDSPAKKRIGIVGLGGLGHVAVK 202
+P + AA + +T + + D + L+ S A GG+G A++
Sbjct: 314 IPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAA---------GGVGMAAIQ 364
Query: 203 FGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDF 251
+ G V +T+ + + + + E + S+ RT DF
Sbjct: 365 LARHLG--AEVYATASEDKW--QAVELSREHLASS---------RTCDF 400
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A Length = 315 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 2e-05
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF 233
+ + +GI+G G LG + +A+G + S S + +G +E
Sbjct: 136 TREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREEL 187
|
| >3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} Length = 324 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 4e-05
Identities = 10/48 (20%), Positives = 18/48 (37%)
Query: 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF 233
+++ I G G +G A G HV ++T+ E +
Sbjct: 138 QQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFHETVAFTAT 185
|
| >3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} Length = 324 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 4e-05
Identities = 11/52 (21%), Positives = 19/52 (36%)
Query: 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF 233
+ + I+G G +G GK FG V +S S + ++
Sbjct: 137 GLKGRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFDQVYQLPAL 188
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Length = 293 | Back alignment and structure |
|---|
Score = 41.1 bits (96), Expect = 3e-04
Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Query: 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAG 245
+ ++GLG +G + A G V V + E +G + F +S +
Sbjct: 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAE-MGMEPFHIS----KAAQE 210
Query: 246 KRTLDFILDTVSAK 259
R +D ++T+ A
Sbjct: 211 LRDVDVCINTIPAL 224
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 360 | |||
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 100.0 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 100.0 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 100.0 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 100.0 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 100.0 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 100.0 | |
| 4eez_A | 348 | Alcohol dehydrogenase 1; site-saturation mutagenes | 100.0 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 100.0 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 100.0 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 100.0 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 100.0 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 100.0 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 100.0 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 100.0 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 100.0 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 100.0 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 100.0 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 100.0 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 100.0 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 100.0 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 100.0 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 100.0 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 100.0 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 100.0 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 100.0 | |
| 4a2c_A | 346 | Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc | 100.0 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 100.0 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 100.0 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 100.0 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 100.0 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 100.0 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 100.0 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 100.0 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 100.0 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 100.0 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 100.0 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 100.0 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 100.0 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 100.0 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 100.0 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 100.0 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 100.0 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 100.0 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 100.0 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 100.0 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 100.0 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 100.0 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 100.0 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 100.0 | |
| 3goh_A | 315 | Alcohol dehydrogenase, zinc-containing; NP_718042. | 100.0 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 100.0 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 100.0 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 100.0 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 100.0 | |
| 4a27_A | 349 | Synaptic vesicle membrane protein VAT-1 homolog-L; | 100.0 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 100.0 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 100.0 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 100.0 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 100.0 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 100.0 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 100.0 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 100.0 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 100.0 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 100.0 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 100.0 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 100.0 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 100.0 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 100.0 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 100.0 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 100.0 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 99.85 | |
| 2yvl_A | 248 | TRMI protein, hypothetical protein; tRNA, methyltr | 99.18 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 99.12 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 99.01 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.95 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 98.95 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 98.92 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 98.75 | |
| 3ce6_A | 494 | Adenosylhomocysteinase; protein-substrate complex, | 98.66 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 98.52 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 98.51 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 98.38 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.33 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 98.32 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.29 | |
| 3gvp_A | 435 | Adenosylhomocysteinase 3; protein CO-factor comple | 98.28 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.21 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 98.19 | |
| 1p91_A | 269 | Ribosomal RNA large subunit methyltransferase A; R | 98.19 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 98.15 | |
| 3fpf_A | 298 | Mtnas, putative uncharacterized protein; thermonic | 98.14 | |
| 1o54_A | 277 | SAM-dependent O-methyltransferase; TM0748, structu | 98.12 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 98.1 | |
| 3n58_A | 464 | Adenosylhomocysteinase; ssgcid, hydrolase, structu | 98.09 | |
| 3h9u_A | 436 | Adenosylhomocysteinase; NAD CO-factor complex, str | 97.94 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.88 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 97.86 | |
| 1i9g_A | 280 | Hypothetical protein RV2118C; mtase, adoMet, cryst | 97.78 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 97.77 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 97.77 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 97.75 | |
| 2b25_A | 336 | Hypothetical protein; structural genomics, methyl | 97.75 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 97.74 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 97.73 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 97.72 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 97.72 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 97.72 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 97.72 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 97.71 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 97.71 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 97.7 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 97.69 | |
| 3njr_A | 204 | Precorrin-6Y methylase; methyltransferase, decarbo | 97.69 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 97.68 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 97.68 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 97.66 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 97.66 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 97.66 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.66 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 97.66 | |
| 3mb5_A | 255 | SAM-dependent methyltransferase; RNA methyltransfe | 97.65 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 97.62 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 97.61 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 97.61 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 97.61 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 97.59 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 97.58 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 97.58 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 97.58 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 97.57 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 97.57 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 97.56 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 97.56 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 97.56 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 97.56 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 97.55 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 97.54 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 97.54 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 97.53 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 97.53 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 97.53 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 97.51 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 97.5 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 97.5 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 97.49 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 97.49 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 97.49 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 97.49 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 97.49 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 97.49 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 97.48 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 97.48 | |
| 3hm2_A | 178 | Precorrin-6Y C5,15-methyltransferase; alpha-beta-s | 97.46 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 97.45 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 97.44 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 97.43 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 97.43 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 97.42 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 97.42 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.42 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 97.41 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 97.41 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 97.41 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 97.4 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 97.4 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 97.39 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 97.39 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 97.39 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.39 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 97.39 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 97.39 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 97.39 | |
| 3d64_A | 494 | Adenosylhomocysteinase; structural genomics, ssgci | 97.39 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 97.38 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 97.38 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 97.38 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 97.37 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 97.37 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 97.37 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 97.37 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 97.36 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 97.36 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 97.36 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 97.36 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 97.36 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 97.35 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 97.34 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 97.34 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 97.34 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 97.34 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 97.34 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 97.34 | |
| 1v8b_A | 479 | Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2 | 97.33 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 97.32 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 97.32 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 97.32 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 97.31 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 97.3 | |
| 3e05_A | 204 | Precorrin-6Y C5,15-methyltransferase (decarboxyla; | 97.3 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 97.3 | |
| 2pbf_A | 227 | Protein-L-isoaspartate O-methyltransferase beta-A | 97.3 | |
| 3lbf_A | 210 | Protein-L-isoaspartate O-methyltransferase; modifi | 97.3 | |
| 2yxe_A | 215 | Protein-L-isoaspartate O-methyltransferase; rossma | 97.3 | |
| 4df3_A | 233 | Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; | 97.3 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 97.3 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 97.3 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 97.28 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 97.27 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 97.27 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 97.27 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 97.27 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 97.26 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 97.26 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 97.26 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 97.26 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 97.26 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 97.25 | |
| 1i1n_A | 226 | Protein-L-isoaspartate O-methyltransferase; S-aden | 97.25 | |
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 97.25 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 97.25 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 97.24 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 97.24 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 97.24 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 97.24 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 97.22 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 97.22 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 97.22 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 97.21 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 97.21 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 97.21 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 97.2 | |
| 1jg1_A | 235 | PIMT;, protein-L-isoaspartate O-methyltransferase; | 97.19 | |
| 1r18_A | 227 | Protein-L-isoaspartate(D-aspartate)-O-methyltrans; | 97.19 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.19 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 97.19 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 97.19 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 97.18 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 97.18 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 97.17 | |
| 2pwy_A | 258 | TRNA (adenine-N(1)-)-methyltransferase; mtase, ado | 97.17 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 97.17 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 97.17 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 97.16 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 97.15 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 97.15 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 97.15 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 97.15 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 97.15 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 97.14 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 97.14 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 97.14 | |
| 2fk8_A | 318 | Methoxy mycolic acid synthase 4; S-adenosylmethion | 97.14 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 97.13 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 97.13 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 97.12 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 97.12 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 97.12 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 97.12 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 97.11 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 97.11 | |
| 3hem_A | 302 | Cyclopropane-fatty-acyl-phospholipid synthase 2; p | 97.11 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 97.11 | |
| 3m33_A | 226 | Uncharacterized protein; structural genomics, PSI- | 97.11 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 97.1 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 97.1 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 97.1 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 97.09 | |
| 3ujc_A | 266 | Phosphoethanolamine N-methyltransferase; parasite; | 97.09 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 97.09 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 97.08 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 97.08 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 97.08 | |
| 3cea_A | 346 | MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore | 97.08 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 97.08 | |
| 3eey_A | 197 | Putative rRNA methylase; rRNA methylation, S-adeno | 97.08 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 97.07 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 97.07 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 97.06 | |
| 3mti_A | 185 | RRNA methylase; SAM-dependent, PSI, MCSG, structur | 97.05 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 97.05 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 97.05 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 97.05 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 97.05 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 97.04 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 97.04 | |
| 1c1d_A | 355 | L-phenylalanine dehydrogenase; amino acid dehydrog | 97.04 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 97.03 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 97.03 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 97.02 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 97.02 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 97.02 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 97.02 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 97.01 | |
| 2gpy_A | 233 | O-methyltransferase; structural genomics, PSI, pro | 97.0 | |
| 1fbn_A | 230 | MJ fibrillarin homologue; MJ proteins, ribosomal R | 97.0 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 97.0 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 97.0 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 97.0 | |
| 2ekl_A | 313 | D-3-phosphoglycerate dehydrogenase; structural gen | 97.0 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 97.0 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 96.99 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 96.99 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 96.99 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 96.99 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 96.98 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 96.98 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 96.98 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 96.96 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 96.96 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 96.96 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 96.95 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 96.95 | |
| 2g76_A | 335 | 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor | 96.95 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 96.95 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 96.93 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 96.93 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 96.92 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 96.92 | |
| 3db2_A | 354 | Putative NADPH-dependent oxidoreductase; two domai | 96.92 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 96.92 | |
| 4hkt_A | 331 | Inositol 2-dehydrogenase; structural genomics, nys | 96.91 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 96.91 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 96.9 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 96.9 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 96.9 | |
| 1kpg_A | 287 | CFA synthase;, cyclopropane-fatty-acyl-phospholipi | 96.9 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 96.89 | |
| 1vbf_A | 231 | 231AA long hypothetical protein-L-isoaspartate O- | 96.89 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 96.89 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 96.89 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 96.89 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 96.88 | |
| 2j6i_A | 364 | Formate dehydrogenase; oxidoreductase, D-specific- | 96.88 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 96.88 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 96.87 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 96.87 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 96.87 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 96.87 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 96.86 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 96.86 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 96.86 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 96.84 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 96.83 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 96.83 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 96.83 | |
| 2gb4_A | 252 | Thiopurine S-methyltransferase; 18204406, thiopuri | 96.83 | |
| 3rc1_A | 350 | Sugar 3-ketoreductase; sugar biosynthesis, TDP bin | 96.83 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 96.83 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 96.83 | |
| 2g5c_A | 281 | Prephenate dehydrogenase; TYRA, oxidoreductase; HE | 96.82 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 96.81 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 96.81 | |
| 4hy3_A | 365 | Phosphoglycerate oxidoreductase; PSI-biology, stru | 96.81 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 96.81 | |
| 2glx_A | 332 | 1,5-anhydro-D-fructose reductase; NADP(H) dependen | 96.79 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 96.79 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 96.79 | |
| 2hnk_A | 239 | SAM-dependent O-methyltransferase; modified rossma | 96.79 | |
| 2nac_A | 393 | NAD-dependent formate dehydrogenase; oxidoreductas | 96.78 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 96.77 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 96.77 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 96.76 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 96.76 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 96.75 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 96.75 | |
| 3grz_A | 205 | L11 mtase, ribosomal protein L11 methyltransferase | 96.75 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 96.75 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 96.75 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 96.74 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 96.74 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 96.74 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 96.74 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 96.74 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 96.73 | |
| 3gg9_A | 352 | D-3-phosphoglycerate dehydrogenase oxidoreductase; | 96.73 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 96.72 | |
| 1dl5_A | 317 | Protein-L-isoaspartate O-methyltransferase; isoasp | 96.72 | |
| 3tfw_A | 248 | Putative O-methyltransferase; PSI-biology, nysgrc, | 96.72 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 96.72 | |
| 3euw_A | 344 | MYO-inositol dehydrogenase; protein structure init | 96.71 | |
| 2c2x_A | 281 | Methylenetetrahydrofolate dehydrogenase- methenylt | 96.69 | |
| 1nkv_A | 256 | Hypothetical protein YJHP; structural genomics, PS | 96.68 | |
| 3vc1_A | 312 | Geranyl diphosphate 2-C-methyltransferase; rossman | 96.67 | |
| 2dbq_A | 334 | Glyoxylate reductase; D-3-phosphoglycerate dehydro | 96.67 | |
| 1npy_A | 271 | Hypothetical shikimate 5-dehydrogenase-like protei | 96.66 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 96.66 | |
| 3ou2_A | 218 | SAM-dependent methyltransferase; O-methyltransfera | 96.66 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 96.66 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 96.65 | |
| 4e5n_A | 330 | Thermostable phosphite dehydrogenase; D-2-hydroxya | 96.65 | |
| 2f1k_A | 279 | Prephenate dehydrogenase; tyrosine synthesis, X-RA | 96.64 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 96.64 | |
| 1pjz_A | 203 | Thiopurine S-methyltransferase; polymorphism, S-ad | 96.64 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 96.63 | |
| 2nxc_A | 254 | L11 mtase, ribosomal protein L11 methyltransferase | 96.62 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 96.62 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 96.61 | |
| 3e18_A | 359 | Oxidoreductase; dehydrogenase, NAD-binding, struct | 96.59 | |
| 1iy9_A | 275 | Spermidine synthase; rossmann fold, structural gen | 96.59 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 96.58 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 96.57 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 96.56 | |
| 3q2i_A | 354 | Dehydrogenase; rossmann fold, UDP-sugar binding, N | 96.56 | |
| 3ezy_A | 344 | Dehydrogenase; structural genomics, unknown functi | 96.55 | |
| 2avd_A | 229 | Catechol-O-methyltransferase; structural genomics, | 96.53 | |
| 1gdh_A | 320 | D-glycerate dehydrogenase; oxidoreductase(CHOH (D) | 96.53 | |
| 4fb5_A | 393 | Probable oxidoreductase protein; PSI-biology, nysg | 96.53 | |
| 2d0i_A | 333 | Dehydrogenase; structural genomics, NPPSFA, nation | 96.52 | |
| 1l3i_A | 192 | Precorrin-6Y methyltransferase/putative decarboxyl | 96.52 | |
| 3orh_A | 236 | Guanidinoacetate N-methyltransferase; structura ge | 96.52 | |
| 1g8a_A | 227 | Fibrillarin-like PRE-rRNA processing protein; rRNA | 96.52 | |
| 1yb2_A | 275 | Hypothetical protein TA0852; structural genomics, | 96.51 | |
| 2kw5_A | 202 | SLR1183 protein; structural genomics, northeast st | 96.49 | |
| 2w2k_A | 348 | D-mandelate dehydrogenase; 2-hydroxyacid dehydroge | 96.49 | |
| 1nvm_B | 312 | Acetaldehyde dehydrogenase (acylating), 4-hydroxy- | 96.48 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 96.48 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 96.48 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 96.47 | |
| 1vl6_A | 388 | Malate oxidoreductase; TM0542, NAD-dependent malic | 96.47 | |
| 3dr5_A | 221 | Putative O-methyltransferase; Q8NRD3, CGL1119, PF0 | 96.46 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 96.46 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 96.46 | |
| 3i9f_A | 170 | Putative type 11 methyltransferase; structural gen | 96.46 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 96.45 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 96.45 | |
| 1omo_A | 322 | Alanine dehydrogenase; two-domain, beta-sandwich-d | 96.44 | |
| 4had_A | 350 | Probable oxidoreductase protein; structural genomi | 96.44 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 96.43 | |
| 3iv6_A | 261 | Putative Zn-dependent alcohol dehydrogenase; alpha | 96.43 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 96.43 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 96.43 | |
| 1xea_A | 323 | Oxidoreductase, GFO/IDH/MOCA family; structural ge | 96.43 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 96.39 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 96.38 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 96.38 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 96.36 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 96.36 | |
| 2nyu_A | 196 | Putative ribosomal RNA methyltransferase 2; SAM, s | 96.36 | |
| 3e9m_A | 330 | Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, | 96.34 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 96.34 | |
| 3sm3_A | 235 | SAM-dependent methyltransferases; NESG, structural | 96.34 | |
| 2o57_A | 297 | Putative sarcosine dimethylglycine methyltransfera | 96.34 | |
| 4gek_A | 261 | TRNA (CMO5U34)-methyltransferase; structural genom | 96.33 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 96.32 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 96.3 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 96.3 | |
| 3hnr_A | 220 | Probable methyltransferase BT9727_4108; structural | 96.28 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 96.28 | |
| 1yqg_A | 263 | Pyrroline-5-carboxylate reductase; structural geno | 96.28 | |
| 3f4k_A | 257 | Putative methyltransferase; structural genomics, P | 96.28 | |
| 3evz_A | 230 | Methyltransferase; NYSGXRC, NEW YORK SGX research | 96.27 | |
| 2i99_A | 312 | MU-crystallin homolog; thyroid hormine binding pro | 96.27 | |
| 1ixk_A | 315 | Methyltransferase; open beta sheet; 1.90A {Pyrococ | 96.27 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 96.26 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 96.26 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 96.26 | |
| 2yqz_A | 263 | Hypothetical protein TTHA0223; RNA methyltransfera | 96.24 | |
| 1j4a_A | 333 | D-LDH, D-lactate dehydrogenase; NAD-dependent dehy | 96.24 | |
| 1inl_A | 296 | Spermidine synthase; beta-barrel, rossman fold, st | 96.23 | |
| 1zh8_A | 340 | Oxidoreductase; TM0312, structural genomics, JO ce | 96.21 | |
| 3dty_A | 398 | Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetram | 96.2 | |
| 3e23_A | 211 | Uncharacterized protein RPA2492; alpha-beta protei | 96.19 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 96.19 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 96.19 | |
| 3bus_A | 273 | REBM, methyltransferase; rebeccamycin synthesis; H | 96.19 | |
| 3l8d_A | 242 | Methyltransferase; structural genomics, PSI, nysgr | 96.18 | |
| 3v5n_A | 417 | Oxidoreductase; structural genomics, PSI-biology, | 96.18 | |
| 3ktd_A | 341 | Prephenate dehydrogenase; structural genomics, joi | 96.18 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 96.17 | |
| 4g2n_A | 345 | D-isomer specific 2-hydroxyacid dehydrogenase, Na; | 96.17 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 96.15 | |
| 3mz0_A | 344 | Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; | 96.15 | |
| 1mjf_A | 281 | Spermidine synthase; spermidine synthetase, struct | 96.14 | |
| 2p35_A | 259 | Trans-aconitate 2-methyltransferase; SAM dependent | 96.14 | |
| 2b2c_A | 314 | Spermidine synthase; beta-alpha, transferase; 2.50 | 96.13 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 96.13 | |
| 3cbg_A | 232 | O-methyltransferase; cyanobacterium; HET: SAH FER | 96.12 | |
| 2o07_A | 304 | Spermidine synthase; structural genomics, structur | 96.11 | |
| 3adn_A | 294 | Spermidine synthase; aminopropyltransferase, polya | 96.1 | |
| 4gqa_A | 412 | NAD binding oxidoreductase; structural genomics, P | 96.1 | |
| 3e8s_A | 227 | Putative SAM dependent methyltransferase; NP_74470 | 96.09 | |
| 2cvz_A | 289 | Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; | 96.08 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 96.08 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 96.07 | |
| 2i7c_A | 283 | Spermidine synthase; transferase, structural genom | 96.07 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 96.07 | |
| 3tr6_A | 225 | O-methyltransferase; cellular processes; HET: SAH; | 96.07 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 96.06 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 96.05 | |
| 1mx3_A | 347 | CTBP1, C-terminal binding protein 1; nuclear prote | 96.05 | |
| 3evt_A | 324 | Phosphoglycerate dehydrogenase; structural genomic | 96.04 | |
| 2iz1_A | 474 | 6-phosphogluconate dehydrogenase, decarboxylating; | 96.04 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 96.04 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 96.04 | |
| 3ohs_X | 334 | Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; d | 96.04 | |
| 2pi1_A | 334 | D-lactate dehydrogenase; oxidoreductase, D-LDH, NA | 96.04 | |
| 3cgg_A | 195 | SAM-dependent methyltransferase; NP_600671.1, meth | 96.03 | |
| 3h2b_A | 203 | SAM-dependent methyltransferase; alpha-beta protei | 96.03 | |
| 1zx0_A | 236 | Guanidinoacetate N-methyltransferase; structural g | 96.02 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 96.01 |
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-60 Score=443.58 Aligned_cols=348 Identities=57% Similarity=1.012 Sum_probs=310.9
Q ss_pred CCcccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCC
Q 018158 6 PNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVK 85 (360)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~ 85 (360)
+.+||+++++..+++++.++++++|.|+|+++||+|||.+++||++|++.+.|.++...+|.++|||++|+|+++|++|+
T Consensus 11 ~~~~mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~ 90 (366)
T 1yqd_A 11 EEHPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGEVTEVGSKVK 90 (366)
T ss_dssp HHSSEEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSCCCSSBCCCCCEEEEEEEECTTCC
T ss_pred hhCCeeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCCCCCCEecccceEEEEEEECCCCC
Confidence 34479999999998889999999999999999999999999999999999998775556899999999999999999999
Q ss_pred CCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccc
Q 018158 86 NFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLC 165 (360)
Q Consensus 86 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~ 165 (360)
+|++||||++.+....|+.|.+|+.|+++.|++..+.+.|....+...+|+|+||+.+|+++++++|+++++++||++++
T Consensus 91 ~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~ 170 (366)
T 1yqd_A 91 KVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLC 170 (366)
T ss_dssp SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGT
T ss_pred cCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHhhhhhh
Confidence 99999999887777799999999999999997654444443333445679999999999999999999999999999999
Q ss_pred hhhhhhchhhccCCCCCC-CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHh
Q 018158 166 AGITVFCPMKDNNLIDSP-AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQA 244 (360)
Q Consensus 166 ~~~ta~~~l~~~~~~~~~-~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~ 244 (360)
++.|||+++.... ++ +|++|||+|+|++|++++|+|+.+|++|+++++++++++.+++++|+++++++.+.+....
T Consensus 171 ~~~ta~~al~~~~---~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~ 247 (366)
T 1yqd_A 171 AGITVYSPLKYFG---LDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQA 247 (366)
T ss_dssp HHHHHHHHHHHTT---CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHH
T ss_pred hHHHHHHHHHhcC---cCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHH
Confidence 9999999998766 55 8999999999999999999999999999999999999999884499999999887655555
Q ss_pred cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc
Q 018158 245 GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC 324 (360)
Q Consensus 245 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~ 324 (360)
...++|++||++|....+..++++++++|+++.+|.......++...++.+++++.++.....++++++++++.++++++
T Consensus 248 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~ 327 (366)
T 1yqd_A 248 AAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAGSGIGGMKETQEMIDFAAKHNITA 327 (366)
T ss_dssp TTTCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSCEEECHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHTTCCC
T ss_pred hhCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCCCCcCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCCC
Confidence 55689999999998766799999999999999999876666677777889999999998888889999999999999998
Q ss_pred ceEEECCccHHHHHHHHHcCCCceeEEEecCC
Q 018158 325 NIEVIKPDQINEALDRLARNDVRYRFVIDIAG 356 (360)
Q Consensus 325 ~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~ 356 (360)
.+++|+|+++++|++.+.+++..||+|+++++
T Consensus 328 ~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~~~ 359 (366)
T 1yqd_A 328 DIEVISTDYLNTAMERLAKNDVRYRFVIDVGN 359 (366)
T ss_dssp CEEEECGGGHHHHHHHHHTTCCSSEEEECHHH
T ss_pred ceEEEcHHHHHHHHHHHHcCCcceEEEEEccc
Confidence 88999999999999999999888999999854
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-60 Score=441.43 Aligned_cols=345 Identities=46% Similarity=0.898 Sum_probs=305.8
Q ss_pred ccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCC
Q 018158 9 TQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 9 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
||+++.+..+++++.++++++|.|+|+++||+|||++++||++|++.++|.++...+|.++|||++|+|+++|++|++|+
T Consensus 7 ~m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~ 86 (357)
T 2cf5_A 7 ERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFT 86 (357)
T ss_dssp CCEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTCCCSSBCCCCEEEEEEEEECSSCCSCC
T ss_pred cceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCCC
Confidence 37778888888889999999999999999999999999999999999998765556799999999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||||++.+...+|+.|.+|+.|+++.|.+..+.+.+....+...+|+|+||+++|+++++++|+++++++||++++++.
T Consensus 87 vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~ 166 (357)
T 2cf5_A 87 VGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGV 166 (357)
T ss_dssp TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGGGTHHH
T ss_pred CCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhhhhhhhHH
Confidence 99999887777789999999999999997654443333223344679999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCC-CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCC
Q 018158 169 TVFCPMKDNNLIDSP-AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKR 247 (360)
Q Consensus 169 ta~~~l~~~~~~~~~-~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~ 247 (360)
|||+++.... ++ +|++|||+|+|++|++++|+|+.+|++|+++++++++++.+++++|+++++++++.+...+...
T Consensus 167 ta~~~l~~~~---~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~ 243 (357)
T 2cf5_A 167 TVYSPLSHFG---LKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELAD 243 (357)
T ss_dssp HHHHHHHHTS---TTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTT
T ss_pred HHHHHHHhcC---CCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcC
Confidence 9999998765 56 9999999999999999999999999999999999999999883399999999887655555556
Q ss_pred CcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcc-cChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccce
Q 018158 248 TLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFE-LPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNI 326 (360)
Q Consensus 248 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i 326 (360)
++|++||++|....+..++++++++|+++.+|....... ++.. ++.+++++.++.....+++++++++++++++++.+
T Consensus 244 g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~ 322 (357)
T 2cf5_A 244 SLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPL-LMLGRKVITGSFIGSMKETEEMLEFCKEKGLSSII 322 (357)
T ss_dssp TEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHH-HHHHTCEEEECCSCCHHHHHHHHHHHHHTTCCCCE
T ss_pred CCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHH-HHhCccEEEEEccCCHHHHHHHHHHHHcCCCCCce
Confidence 899999999987678999999999999999998764443 4455 78899999999888888999999999999999888
Q ss_pred EEECCccHHHHHHHHHcCCCceeEEEecCCC
Q 018158 327 EVIKPDQINEALDRLARNDVRYRFVIDIAGG 357 (360)
Q Consensus 327 ~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~ 357 (360)
++|+++++++|++.+++++..||+|+++.++
T Consensus 323 ~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~ 353 (357)
T 2cf5_A 323 EVVKMDYVNTAFERLEKNDVRYRFVVDVEGS 353 (357)
T ss_dssp EEEEGGGHHHHHHHHHTTCSSSEEEEETTSC
T ss_pred EEEeHHHHHHHHHHHHCCCCceEEEEeCCcc
Confidence 9999999999999999998889999999654
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-60 Score=438.91 Aligned_cols=339 Identities=40% Similarity=0.758 Sum_probs=298.5
Q ss_pred ceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCC
Q 018158 11 SVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVG 90 (360)
Q Consensus 11 ~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 90 (360)
+++.+...++++.++++++|.|+|+++||||||++++||++|++.++|.++...+|.++|||++|+|+++|++|++|++|
T Consensus 4 ~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~V~~vG~~v~~~~vG 83 (348)
T 3two_A 4 QSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEIAGIIKEVGKGVKKFKIG 83 (348)
T ss_dssp EEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSCCCSSBCCCCCEEEEEEEECTTCCSCCTT
T ss_pred EEEEEEEccCCCCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCCCCC
Confidence 34455556776789999999999999999999999999999999999988767889999999999999999999999999
Q ss_pred CEEEeccCccCCCCChhhhCCCCCCccccccccccc--ccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 91 DRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGI--FWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 91 d~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~--~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
|||++.+....|+.|.+|+.|++++|......+.+. ...+....|+|+||+.+|+++++++|+++++++||++++++.
T Consensus 84 drV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 163 (348)
T 3two_A 84 DVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGI 163 (348)
T ss_dssp CEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHH
T ss_pred CEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHhhhhhhhHH
Confidence 999987777899999999999999998322222110 111223459999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCC
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRT 248 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~ 248 (360)
|||+++.... +++|++|||+|+|++|++++|+|+.+|++|+++++++++++.+++ +|+++++ . +.+. ...+
T Consensus 164 ta~~~l~~~~---~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~v~-~-~~~~---~~~~ 234 (348)
T 3two_A 164 TTYSPLKFSK---VTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-MGVKHFY-T-DPKQ---CKEE 234 (348)
T ss_dssp HHHHHHHHTT---CCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH-TTCSEEE-S-SGGG---CCSC
T ss_pred HHHHHHHhcC---CCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh-cCCCeec-C-CHHH---HhcC
Confidence 9999998764 559999999999999999999999999999999999999999998 9999988 3 3322 2339
Q ss_pred cCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC-CCcc-cChhhHh-ccCcEEEEeecCCHHHHHHHHHHHhcCCCccc
Q 018158 249 LDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE-APFE-LPSFPLI-FGKRSVKGSMTGGMRETQEMMNVCGKYNITCN 325 (360)
Q Consensus 249 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~-~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~ 325 (360)
+|++||++|....+..++++++++|+++.+|... .... ++...++ .+++++.++.....++++++++++++|++++.
T Consensus 235 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~ 314 (348)
T 3two_A 235 LDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIKETQEMVDFSIKHNIYPE 314 (348)
T ss_dssp EEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCCHHHHHHHHHHHHHTTCCCC
T ss_pred CCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCCHHHHHHHHHHHHhCCCCce
Confidence 9999999999878899999999999999999877 5555 6666777 89999999999999999999999999999998
Q ss_pred eEEECCccHHHHHHHHHcCCCceeEEEecCCCc
Q 018158 326 IEVIKPDQINEALDRLARNDVRYRFVIDIAGGA 358 (360)
Q Consensus 326 i~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~~ 358 (360)
+++|+++++++|++.+.+++..||+|++++++.
T Consensus 315 ~~~~~l~~~~~A~~~~~~~~~~gKvVi~~~~~~ 347 (348)
T 3two_A 315 IDLILGKDIDTAYHNLTHGKAKFRYVIDMKKSF 347 (348)
T ss_dssp EEEECGGGHHHHHHHHHTTCCCSEEEEEGGGCC
T ss_pred EEEEEHHHHHHHHHHHHcCCCceEEEEecCCcC
Confidence 899999999999999999999999999997653
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-60 Score=436.51 Aligned_cols=335 Identities=30% Similarity=0.527 Sum_probs=300.1
Q ss_pred ccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC-CCCCCccccccceEEEEecCCCCCC
Q 018158 9 TQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIITKVGSNVKNF 87 (360)
Q Consensus 9 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~ 87 (360)
||||.++.. ..++++++++|.|+|++|||||||++++||++|++.++|.++. ..+|.++|||++|+|+++|++|++|
T Consensus 2 ~MkA~~~~~--~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~ 79 (340)
T 3s2e_A 2 MMKAAVVRA--FGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRV 79 (340)
T ss_dssp EEEEEEBCS--TTSCCEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECSSCCSC
T ss_pred ceEEEEEec--CCCCCEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEEECCCCCcC
Confidence 477666643 3346999999999999999999999999999999999998753 5689999999999999999999999
Q ss_pred CCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchh
Q 018158 88 KVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAG 167 (360)
Q Consensus 88 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~ 167 (360)
++||||++......|+.|.+|+.|+++.|.+..+ .|...+|+|+||+.+|+++++++|+++++++||++++++
T Consensus 80 ~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~-------~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~ 152 (340)
T 3s2e_A 80 KEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQN-------TGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAG 152 (340)
T ss_dssp CTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEE-------BTTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHH
T ss_pred CCCCEEEecCCCCCCCCChHHhCcCcccCccccc-------cCCCCCCcceeEEEechHHEEECCCCCCHHHhhcccchh
Confidence 9999997666677899999999999999998543 233567999999999999999999999999999999999
Q ss_pred hhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---Hh
Q 018158 168 ITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM---QA 244 (360)
Q Consensus 168 ~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~ 244 (360)
.|||++++... +++|++|||+|+|++|++++|+|+.+|++|+++++++++++.+++ +|+++++|+++.+.. ..
T Consensus 153 ~ta~~~l~~~~---~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~~i~~~~~~~~~~~~~ 228 (340)
T 3s2e_A 153 VTVYKGLKVTD---TRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR-LGAEVAVNARDTDPAAWLQK 228 (340)
T ss_dssp HHHHHHHHTTT---CCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTCSEEEETTTSCHHHHHHH
T ss_pred HHHHHHHHHcC---CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-cCCCEEEeCCCcCHHHHHHH
Confidence 99999997653 559999999999999999999999999999999999999999998 999999998775322 22
Q ss_pred cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCcc
Q 018158 245 GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITC 324 (360)
Q Consensus 245 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~ 324 (360)
...++|++||++|....++.++++++++|+++.+|...+...++...++.+++++.++....+++++++++++++|++++
T Consensus 229 ~~g~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~ 308 (340)
T 3s2e_A 229 EIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESLDFAAHGDVKA 308 (340)
T ss_dssp HHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCC
T ss_pred hCCCCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCCCCCCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhCCCCc
Confidence 23489999999998888999999999999999999887777777788889999999999999999999999999999999
Q ss_pred ceEEECCccHHHHHHHHHcCCCceeEEEecCC
Q 018158 325 NIEVIKPDQINEALDRLARNDVRYRFVIDIAG 356 (360)
Q Consensus 325 ~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~ 356 (360)
.+++|+|+++++|++.+++++..||+|+++++
T Consensus 309 ~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~~~~ 340 (340)
T 3s2e_A 309 TVSTAKLDDVNDVFGRLREGKVEGRVVLDFSR 340 (340)
T ss_dssp CEEEECGGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred eEEEEeHHHHHHHHHHHHcCCCceEEEEecCC
Confidence 88999999999999999999999999999864
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-60 Score=438.20 Aligned_cols=345 Identities=44% Similarity=0.805 Sum_probs=299.0
Q ss_pred ccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCC
Q 018158 9 TQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 9 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
.|++..+...++.+.++++++|.|+|+++||||||++++||++|++.+.|.++...+|.++|||++|+|+++|++|++|+
T Consensus 20 ~~~~~a~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~~ 99 (369)
T 1uuf_A 20 GLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYA 99 (369)
T ss_dssp ---CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred CceEEEEEEcCCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCCCCCCeecccCceEEEEEECCCCCCCC
Confidence 35555666666778999999999999999999999999999999999998765556799999999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccc-cCCCccccceeeEEEeecceeEECCCC-CCccccccccch
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIF-WDGSITYGGYSEMLVADYRFVVHVPEN-IAMDAAAPLLCA 166 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~-~~~~~~~g~~~~~~~v~~~~~~~iP~~-~~~~~aa~l~~~ 166 (360)
+||||++.+....|+.|.+|++|++++|++..+.+.+.. ..|...+|+|+||+.+|+++++++|++ +++++||+++++
T Consensus 100 vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa~l~~~ 179 (369)
T 1uuf_A 100 PGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCA 179 (369)
T ss_dssp TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHHHGGGGTH
T ss_pred CCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHHhhhhhhh
Confidence 999999988888999999999999999997532221111 012245699999999999999999999 999999999999
Q ss_pred hhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcC
Q 018158 167 GITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGK 246 (360)
Q Consensus 167 ~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~ 246 (360)
+.|||+++.... +++|++|||+|+|++|++++|+|+.+|++|+++++++++++.+++ +|+++++++.+.+......
T Consensus 180 ~~tA~~al~~~~---~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-lGa~~vi~~~~~~~~~~~~ 255 (369)
T 1uuf_A 180 GITTYSPLRHWQ---AGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-LGADEVVNSRNADEMAAHL 255 (369)
T ss_dssp HHHHHHHHHHTT---CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HTCSEEEETTCHHHHHTTT
T ss_pred HHHHHHHHHhcC---CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCcEEeccccHHHHHHhh
Confidence 999999998763 559999999999999999999999999999999999999999998 9999999988765555555
Q ss_pred CCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCc-ccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccc
Q 018158 247 RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPF-ELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCN 325 (360)
Q Consensus 247 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~ 325 (360)
.++|++||++|....+..++++++++|+++.+|...... .++...++.+++++.++.....++++++++++++|++++.
T Consensus 256 ~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~ 335 (369)
T 1uuf_A 256 KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVAD 335 (369)
T ss_dssp TCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHHTCCCC
T ss_pred cCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcEEEEeecCCHHHHHHHHHHHHhCCCCcc
Confidence 789999999998767899999999999999999876544 5666778889999999988888899999999999999988
Q ss_pred eEEECCccHHHHHHHHHcCCCceeEEEecCCC
Q 018158 326 IEVIKPDQINEALDRLARNDVRYRFVIDIAGG 357 (360)
Q Consensus 326 i~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~ 357 (360)
+++|+++++++|++.+.+++..||+|+++++.
T Consensus 336 i~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~ 367 (369)
T 1uuf_A 336 IEMIRADQINEAYERMLRGDVKYRFVIDNRTL 367 (369)
T ss_dssp EEEECGGGHHHHHHHHHTTCSSSEEEEEGGGG
T ss_pred eEEEcHHHHHHHHHHHHcCCCceEEEEecCCC
Confidence 88899999999999999988889999998764
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-59 Score=436.50 Aligned_cols=346 Identities=32% Similarity=0.573 Sum_probs=299.0
Q ss_pred CCCCcccceeEEeccCCCCCceEEE--EeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEec
Q 018158 4 TTPNHTQSVVGWAAHDPSGKITPYI--FKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVG 81 (360)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~l~~~~--~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG 81 (360)
++|.+ |++.++.. +.+++++++ +|.|+|+++||||||++++||++|++.++|.++...+|.++|||++|+|+++|
T Consensus 2 ~~p~~-mka~~~~~--~~~~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~GhE~~G~V~~vG 78 (360)
T 1piw_A 2 SYPEK-FEGIAIQS--HEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLG 78 (360)
T ss_dssp CTTTC-EEEEEECC--SSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEEC
T ss_pred CCChh-eEEEEEec--CCCCeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCCCCCCcccCcCceEEEEEeC
Confidence 36777 67666543 334699999 99999999999999999999999999999977555679999999999999999
Q ss_pred CCCC-CCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCcccc
Q 018158 82 SNVK-NFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAA 160 (360)
Q Consensus 82 ~~v~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a 160 (360)
++|+ +|++||||++.+....|+.|.+|+.|+++.|.+....+.+....|...+|+|+||+++|+++++++|+++++++|
T Consensus 79 ~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~a 158 (360)
T 1piw_A 79 PKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLA 158 (360)
T ss_dssp TTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSCHHHH
T ss_pred CCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCCCHHHh
Confidence 9999 999999998777777999999999999999987511111111113345799999999999999999999999999
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH-
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA- 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~- 239 (360)
|++++.+.|||+++... . +++|++|||+|+|++|++++|+|+.+|++|+++++++++++.+++ +|+++++++.+.
T Consensus 159 a~l~~~~~ta~~~l~~~-~--~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-lGa~~v~~~~~~~ 234 (360)
T 1piw_A 159 APLLCGGLTVYSPLVRN-G--CGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK-MGADHYIATLEEG 234 (360)
T ss_dssp GGGGTHHHHHHHHHHHT-T--CSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTCSEEEEGGGTS
T ss_pred hhhhhhHHHHHHHHHHc-C--CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCCCEEEcCcCch
Confidence 99999999999999874 4 459999999999999999999999999999999999999999998 999999998765
Q ss_pred HHHHhcCCCcCEEEEcCCC--cccHHHHHHHhccCCEEEEeCCCCCCc-ccChhhHhccCcEEEEeecCCHHHHHHHHHH
Q 018158 240 MQMQAGKRTLDFILDTVSA--KHSLGPILELLKVNGTLSVVGAPEAPF-ELPSFPLIFGKRSVKGSMTGGMRETQEMMNV 316 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~--~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 316 (360)
+.......++|++||++|. ...+..++++++++|+++.+|.... . .++...++.+++++.++.....+++++++++
T Consensus 235 ~~~~~~~~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l 313 (360)
T 1piw_A 235 DWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKAVSISYSALGSIKELNQLLKL 313 (360)
T ss_dssp CHHHHSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBSCEEEECCCCCHHHHHHHHHH
T ss_pred HHHHHhhcCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccccCHHHHHhCCeEEEEEecCCHHHHHHHHHH
Confidence 4444444689999999998 5677899999999999999998765 4 4555667889999999988888899999999
Q ss_pred HhcCCCccceEEECCcc--HHHHHHHHHcCCCceeEEEecCCC
Q 018158 317 CGKYNITCNIEVIKPDQ--INEALDRLARNDVRYRFVIDIAGG 357 (360)
Q Consensus 317 l~~~~l~~~i~~~~~~~--~~~a~~~~~~~~~~gkvvi~~~~~ 357 (360)
+.++++++.+++|++++ +++|++.+++++..||+|++++++
T Consensus 314 ~~~g~l~~~i~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~~~ 356 (360)
T 1piw_A 314 VSEKDIKIWVETLPVGEAGVHEAFERMEKGDVRYRFTLVGYDK 356 (360)
T ss_dssp HHHTTCCCCEEEEESSHHHHHHHHHHHHHTCCSSEEEEECCHH
T ss_pred HHhCCCcceEEEEeccHhHHHHHHHHHHCCCCceEEEEecCcc
Confidence 99999988789999999 999999999998889999998654
|
| >4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-59 Score=430.19 Aligned_cols=334 Identities=25% Similarity=0.443 Sum_probs=301.4
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|||.++. ..+++.++++|+|.|+|+||||||||.+++||++|+++++|.+ ..++|.++|||++|+|+++|++|++|++
T Consensus 1 MKA~v~~-~~~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~-~~~~p~i~GhE~aG~V~~vG~~V~~~~~ 78 (348)
T 4eez_A 1 MKAAVVR-HNPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDF-GNKAGTVLGHEGIGIVKEIGADVSSLQV 78 (348)
T ss_dssp CEEEEEC-SSCCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTT-CCCTTCBCCSEEEEEEEEECTTCCSCCT
T ss_pred CeEEEEE-cCCCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCC-CCCCCcccceeEEEEEEEECceeeeccc
Confidence 5555443 3566789999999999999999999999999999999999988 4578999999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
||||++.+....|+.|.+|..+.++.|...... +...+|+|+||+.+++++++++|+++++++|+++++++.|
T Consensus 79 GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~t 151 (348)
T 4eez_A 79 GDRVSVAWFFEGCGHCEYCVSGNETFCREVKNA-------GYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVT 151 (348)
T ss_dssp TCEEEEESEEECCSSSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHH
T ss_pred CCeEeecccccccCccccccCCccccccccccc-------ccccCCcceeeccccccceeecCCCCCHHHHhhcccceee
Confidence 999999999999999999999999999875432 2356899999999999999999999999999999999999
Q ss_pred hhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHh---c
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQA---G 245 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~---~ 245 (360)
||++++... +++|++|||+|+|++|.+++|+|+.+ |++|++++++++|++.+++ +|+++++|+++.+.... .
T Consensus 152 a~~~l~~~~---~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~-~Ga~~~i~~~~~~~~~~v~~~ 227 (348)
T 4eez_A 152 TYKAIKVSG---VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK-IGADVTINSGDVNPVDEIKKI 227 (348)
T ss_dssp HHHHHHHHT---CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH-TTCSEEEEC-CCCHHHHHHHH
T ss_pred EEeeecccC---CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh-cCCeEEEeCCCCCHHHHhhhh
Confidence 999997665 55999999999999999999999976 6799999999999999999 99999999887643322 2
Q ss_pred --CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCc
Q 018158 246 --KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNIT 323 (360)
Q Consensus 246 --~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~ 323 (360)
+.++|.++++++....+..++++++++|+++.+|.......++...++.+++++.|+..+++.+++++++++++|+++
T Consensus 228 t~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~~~~~l~~~g~i~ 307 (348)
T 4eez_A 228 TGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGKVK 307 (348)
T ss_dssp TTSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEEEECHHHHHHSCCEEEECCSCCHHHHHHHHHHHHTTSCC
T ss_pred cCCCCceEEEEeccCcchhheeheeecCCceEEEEeccCCCCccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHcCCCE
Confidence 678999999999988899999999999999999988877788888899999999999999999999999999999999
Q ss_pred cceEEECCccHHHHHHHHHcCCCceeEEEecCC
Q 018158 324 CNIEVIKPDQINEALDRLARNDVRYRFVIDIAG 356 (360)
Q Consensus 324 ~~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~ 356 (360)
+.+++|+|+++++|++.+++++..||+||+|+.
T Consensus 308 p~~~~~~l~~~~~A~~~l~~g~~~GKvVl~~sk 340 (348)
T 4eez_A 308 PIVATRKLEEINDIIDEMKAGKIEGRMVIDFTK 340 (348)
T ss_dssp CCEEEECGGGHHHHHHHHHTTCCSSEEEEECC-
T ss_pred EEEEEEeHHHHHHHHHHHHCCCCccEEEEEccc
Confidence 888999999999999999999999999999964
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-58 Score=427.29 Aligned_cols=346 Identities=23% Similarity=0.341 Sum_probs=290.5
Q ss_pred CCCCCCcccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEec
Q 018158 2 AQTTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVG 81 (360)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG 81 (360)
.++.|.| |+|.++ .++.+.++++++|.|+|+++||||||++++||++|+++++|.++...+|.++|||++|+|+++|
T Consensus 2 ~~~~~~t-mkA~v~--~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG 78 (378)
T 3uko_A 2 TQGQVIT-CKAAVA--YEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVG 78 (378)
T ss_dssp CTTSCEE-EEEEEB--CSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEEC
T ss_pred Cccccee-eEEEEE--ecCCCccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCCCCCCccCCccceEEEEEeC
Confidence 4556777 665554 4444459999999999999999999999999999999999987667889999999999999999
Q ss_pred CCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCccccccc-ccccc--------------cCCCccccceeeEEEeecc
Q 018158 82 SNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFT-YNGIF--------------WDGSITYGGYSEMLVADYR 146 (360)
Q Consensus 82 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~g~~--------------~~~~~~~g~~~~~~~v~~~ 146 (360)
++|++|++||||++.+ ...|+.|.+|+.|++++|.+..+. ..|+. .......|+|+||+.++++
T Consensus 79 ~~v~~~~vGdrV~~~~-~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~ 157 (378)
T 3uko_A 79 EGVTEVQAGDHVIPCY-QAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDV 157 (378)
T ss_dssp TTCCSCCTTCEEEECS-SCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGG
T ss_pred CCCCcCCCCCEEEEec-CCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechh
Confidence 9999999999998755 458999999999999999985331 11211 1112234799999999999
Q ss_pred eeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHH
Q 018158 147 FVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAK 225 (360)
Q Consensus 147 ~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~ 225 (360)
+++++|+++++++||++++++.|||+++.+...++ +|++|||+|+|++|++++|+||.+|+ +|+++++++++++.++
T Consensus 158 ~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~--~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~ 235 (378)
T 3uko_A 158 SVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVE--PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK 235 (378)
T ss_dssp GEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCC--TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH
T ss_pred heEECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 99999999999999999999999999987666655 99999999999999999999999999 7999999999999998
Q ss_pred HHcCCCeEeeCcc--H---HHHHhc-CCCcCEEEEcCCCcccHHHHHHHhccC-CEEEEeCCCCC--CcccChhhHhccC
Q 018158 226 ELLGADEFILSTN--A---MQMQAG-KRTLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPEA--PFELPSFPLIFGK 296 (360)
Q Consensus 226 ~~~g~~~~v~~~~--~---~~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~ 296 (360)
+ +|+++++++.+ . +.+... ..++|++|||+|....+..++++++++ |+++.+|.... ...++...++. +
T Consensus 236 ~-lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~-~ 313 (378)
T 3uko_A 236 K-FGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-G 313 (378)
T ss_dssp T-TTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHT-T
T ss_pred H-cCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHhc-C
Confidence 8 99999999873 2 222222 348999999999977889999999996 99999998653 34455555554 8
Q ss_pred cEEEEeecC---CHHHHHHHHHHHhcCCCcc--ce-EEECCccHHHHHHHHHcCCCceeEEEecCC
Q 018158 297 RSVKGSMTG---GMRETQEMMNVCGKYNITC--NI-EVIKPDQINEALDRLARNDVRYRFVIDIAG 356 (360)
Q Consensus 297 ~~i~~~~~~---~~~~~~~~~~~l~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~ 356 (360)
+++.++..+ ..++++++++++.++++++ .+ ++|+|+++++|++.+.+++.. |+|+++++
T Consensus 314 ~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~-Kvvi~~~~ 378 (378)
T 3uko_A 314 RVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCL-RCVLDTSK 378 (378)
T ss_dssp CEEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCS-EEEEETTC
T ss_pred cEEEEEEecCCCchHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCce-EEEEecCC
Confidence 899998764 4578999999999999864 45 899999999999999998875 99999864
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-58 Score=421.33 Aligned_cols=334 Identities=29% Similarity=0.550 Sum_probs=293.1
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|||.++ .++.++++++++|.|+|+++||+|||++++||++|++.+.|.++ ...+|.++|||++|+|+++|++|++|+
T Consensus 1 Mka~~~--~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~ 78 (339)
T 1rjw_A 1 MKAAVV--EQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLK 78 (339)
T ss_dssp CEEEEB--SSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred CeEEEE--cCCCCCcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEECCCCCcCC
Confidence 455444 33333699999999999999999999999999999999998764 246799999999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||||++.+....|+.|.+|+.|++++|.+..+ . |...+|+|+||+.+|+++++++|+++++++||++++++.
T Consensus 79 vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~--~-----g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ 151 (339)
T 1rjw_A 79 VGDRVGIPWLYSACGHCDYCLSGQETLCEHQKN--A-----GYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGV 151 (339)
T ss_dssp TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEE--B-----TTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHH
T ss_pred CCCEEEEecCCCCCCCCchhhCcCcccCCCcce--e-----ecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHH
Confidence 999999876666799999999999999987532 2 224679999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---HHhc
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ---MQAG 245 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~ 245 (360)
|||+++.... +++|++|||+|+|++|++++|+|+.+|++|+++++++++++.+++ +|+++++|+.+.+. ....
T Consensus 152 ta~~~l~~~~---~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~~~d~~~~~~~~~~~~~ 227 (339)
T 1rjw_A 152 TTYKALKVTG---AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE-LGADLVVNPLKEDAAKFMKEK 227 (339)
T ss_dssp HHHHHHHHHT---CCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCSEEECTTTSCHHHHHHHH
T ss_pred HHHHHHHhcC---CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-CCCCEEecCCCccHHHHHHHH
Confidence 9999998774 559999999999889999999999999999999999999999988 99999988765322 2222
Q ss_pred CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccc
Q 018158 246 KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCN 325 (360)
Q Consensus 246 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~ 325 (360)
..++|++||++|....+..++++++++|+++.+|...+...++...++.+++++.++.....++++++++++.++++++.
T Consensus 228 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~ 307 (339)
T 1rjw_A 228 VGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVKTI 307 (339)
T ss_dssp HSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCCC
T ss_pred hCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCCccCHHHHHhCCcEEEEeccCCHHHHHHHHHHHHcCCCCcc
Confidence 25899999999986678999999999999999998776666677778889999999988888899999999999999988
Q ss_pred eEEECCccHHHHHHHHHcCCCceeEEEecCC
Q 018158 326 IEVIKPDQINEALDRLARNDVRYRFVIDIAG 356 (360)
Q Consensus 326 i~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~ 356 (360)
+++|+++++++|++.+.+++..||+|+++++
T Consensus 308 ~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 338 (339)
T 1rjw_A 308 IEVQPLEKINEVFDRMLKGQINGRVVLTLED 338 (339)
T ss_dssp EEEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred EEEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence 8999999999999999998888999999854
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-57 Score=417.78 Aligned_cols=334 Identities=24% Similarity=0.348 Sum_probs=290.7
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC--CCCCCCccccccceEEEEecCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG--ITMYPVVPGHEITGIITKVGSNVKNF 87 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~--~~~~p~~~G~e~~G~V~~vG~~v~~~ 87 (360)
|||.++. ++.+.++++++|.|+|++|||||||++++||++|++.++|.++ ...+|.++|||++|+|+++|++|++|
T Consensus 1 MkA~~~~--~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~ 78 (345)
T 3jv7_A 1 MKAVQYT--EIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGF 78 (345)
T ss_dssp CEEEEEC--STTSCCEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSC
T ss_pred CeEEEEc--CCCCceEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCC
Confidence 5655553 3334499999999999999999999999999999999998764 35688999999999999999999999
Q ss_pred CCCCEEEeccCccCCCCChhhhCCCCCCcc-cccccccccccCCCccccceeeEEEee-cceeEECCCCCCccccccccc
Q 018158 88 KVGDRAAVGCLAAACMECEFCKDSQENYCD-KIQFTYNGIFWDGSITYGGYSEMLVAD-YRFVVHVPENIAMDAAAPLLC 165 (360)
Q Consensus 88 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~-~~~~~~~g~~~~~~~~~g~~~~~~~v~-~~~~~~iP~~~~~~~aa~l~~ 165 (360)
++||||++.+. ..|+.|.+|++|++++|. +..+... ..+...+|+|+||+.+| +++++++|+ +++++||++++
T Consensus 79 ~vGdrV~~~~~-~~cg~C~~c~~g~~~~c~~~~~~~~~---~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~ 153 (345)
T 3jv7_A 79 GVGDAVAVYGP-WGCGACHACARGRENYCTRAADLGIT---PPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTD 153 (345)
T ss_dssp CTTCEEEECCS-CCCSSSHHHHTTCGGGCSSHHHHTCC---CBTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGT
T ss_pred CCCCEEEEecC-CCCCCChHHHCcCcCcCccccccccc---cCCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhh
Confidence 99999988665 589999999999999994 3332211 12335679999999999 999999999 99999999999
Q ss_pred hhhhhhchhhcc-CCCCCCCCcEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHcCCCeEeeCccH--HH
Q 018158 166 AGITVFCPMKDN-NLIDSPAKKRIGIVGLGGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKELLGADEFILSTNA--MQ 241 (360)
Q Consensus 166 ~~~ta~~~l~~~-~~~~~~~~~~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--~~ 241 (360)
++.|||+++... ..+ ++|++|+|+|+|++|++++|+|+.+ |++|+++++++++++.+++ +|+++++++++. +.
T Consensus 154 ~~~ta~~~l~~~~~~~--~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~-lGa~~~i~~~~~~~~~ 230 (345)
T 3jv7_A 154 AGLTPYHAISRVLPLL--GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE-VGADAAVKSGAGAADA 230 (345)
T ss_dssp TTHHHHHHHHTTGGGC--CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH-TTCSEEEECSTTHHHH
T ss_pred hHHHHHHHHHHhccCC--CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-cCCCEEEcCCCcHHHH
Confidence 999999999884 444 4999999999999999999999999 6799999999999999999 999999988763 12
Q ss_pred HHhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeecCCHHHHHHHHHHHh
Q 018158 242 MQAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCG 318 (360)
Q Consensus 242 ~~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~ 318 (360)
..+. ++++|++||++|....+..++++++++|+++.+|...+ ...++. .++.+++++.++.....+++++++++++
T Consensus 231 v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~l~~ 309 (345)
T 3jv7_A 231 IRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGF-FMIPFGASVVTPYWGTRSELMEVVALAR 309 (345)
T ss_dssp HHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEEST-TTSCTTCEEECCCSCCHHHHHHHHHHHH
T ss_pred HHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCH-HHHhCCCEEEEEecCCHHHHHHHHHHHH
Confidence 2222 56899999999998778999999999999999998765 556664 7788999999999999999999999999
Q ss_pred cCCCccceEEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 319 KYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 319 ~~~l~~~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+|++++.+++|+++++++|++.+.+++..||+|+++
T Consensus 310 ~g~l~~~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p 345 (345)
T 3jv7_A 310 AGRLDIHTETFTLDEGPAAYRRLREGSIRGRGVVVP 345 (345)
T ss_dssp TTCCCCCEEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred cCCCceEEEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence 999998779999999999999999999999999974
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-57 Score=422.23 Aligned_cols=332 Identities=27% Similarity=0.423 Sum_probs=286.4
Q ss_pred CCcccceeEEeccCCCCCceEEEEeCCC-CCCCeEEEEEeeeecccchhhhhccCCC---CCCCCCccccccceEEEEec
Q 018158 6 PNHTQSVVGWAAHDPSGKITPYIFKRRE-NGVNDVTIKILYCGICHTDIHHVKNDWG---ITMYPVVPGHEITGIITKVG 81 (360)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~-~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG 81 (360)
|.+ |++.++.. +.++++++++|.|+ |++|||||||++++||++|++.++|.++ ...+|.++|||++|+|+++|
T Consensus 13 ~~~-mka~~~~~--~g~~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG 89 (359)
T 1h2b_A 13 VER-LKAARLHE--YNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVA 89 (359)
T ss_dssp -----CEEEESS--TTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEEC
T ss_pred hhh-ceEEEEec--CCCCcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEEC
Confidence 555 67666533 33469999999999 9999999999999999999999998764 34679999999999999999
Q ss_pred CCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccc
Q 018158 82 SNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAA 161 (360)
Q Consensus 82 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa 161 (360)
++|++|++||||++. ....|+.|.+|+.|++++|++... . |...+|+|+||+.+|+++++++|+++++++||
T Consensus 90 ~~v~~~~vGdrV~~~-~~~~Cg~C~~C~~g~~~~C~~~~~--~-----G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa 161 (359)
T 1h2b_A 90 EGVEGLEKGDPVILH-PAVTDGTCLACRAGEDMHCENLEF--P-----GLNIDGGFAEFMRTSHRSVIKLPKDISREKLV 161 (359)
T ss_dssp TTCCSCCTTCEEEEC-SCBCCSCSHHHHTTCGGGCTTCBC--B-----TTTBCCSSBSEEEECGGGEEECCTTCCHHHHH
T ss_pred CCCCCCCCCCEEEeC-CCCCCCCChhhhCcCcccCCCccc--c-----ccCCCCcccceEEechHhEEECCCCCCHHHHh
Confidence 999999999999664 456899999999999999987532 2 22467999999999999999999999999999
Q ss_pred ---cccchhhhhhchhhcc-CCCCCCCCcEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHcCCCeEeeC
Q 018158 162 ---PLLCAGITVFCPMKDN-NLIDSPAKKRIGIVGLGGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKELLGADEFILS 236 (360)
Q Consensus 162 ---~l~~~~~ta~~~l~~~-~~~~~~~~~~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~~v~~ 236 (360)
++++++.|||+++... .+ +++|++|||+|+|++|++++|+||.+ |++|+++++++++++.+++ +|+++++|+
T Consensus 162 ~~~~l~~~~~ta~~al~~~~~~--~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~vi~~ 238 (359)
T 1h2b_A 162 EMAPLADAGITAYRAVKKAART--LYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-LGADHVVDA 238 (359)
T ss_dssp HTGGGGTHHHHHHHHHHHHHTT--CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-TTCSEEEET
T ss_pred hccchhhhHHHHHHHHHhhccC--CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-hCCCEEEec
Confidence 8999999999999874 44 44999999999999999999999999 9999999999999999998 999999998
Q ss_pred ccH--HHHHhc--CCCcCEEEEcCCCcc--cHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHH
Q 018158 237 TNA--MQMQAG--KRTLDFILDTVSAKH--SLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRET 310 (360)
Q Consensus 237 ~~~--~~~~~~--~~~~d~vid~~g~~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 310 (360)
++. +..... ++++|++||++|... .+..++++ ++|+++.+|...+. .++...++.+++++.++.....+++
T Consensus 239 ~~~~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~ 315 (359)
T 1h2b_A 239 RRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL-RFPTIRVISSEVSFEGSLVGNYVEL 315 (359)
T ss_dssp TSCHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC-CCCHHHHHHTTCEEEECCSCCHHHH
T ss_pred cchHHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC-CCCHHHHHhCCcEEEEecCCCHHHH
Confidence 764 223332 448999999999875 67777777 89999999987655 6677778889999999988888899
Q ss_pred HHHHHHHhcCCCccceEEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 311 QEMMNVCGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 311 ~~~~~~l~~~~l~~~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+++++++.++++++.+++|+|+++++|++.+.+++..||+|+++
T Consensus 316 ~~~~~l~~~g~l~~~i~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 359 (359)
T 1h2b_A 316 HELVTLALQGKVRVEVDIHKLDEINDVLERLEKGEVLGRAVLIP 359 (359)
T ss_dssp HHHHHHHHTTSCCCCEEEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred HHHHHHHHcCCCcceEEEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence 99999999999988779999999999999999998889999974
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-57 Score=417.93 Aligned_cols=337 Identities=28% Similarity=0.505 Sum_probs=293.4
Q ss_pred CCCcccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCC
Q 018158 5 TPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSN 83 (360)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~ 83 (360)
+|++ |+++++.. +.++++++++|.|+|+++||+|||++++||++|++++.|.++ ...+|.++|||++|+|+++|++
T Consensus 2 ~p~~-mka~~~~~--~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~ 78 (347)
T 2hcy_A 2 IPET-QKGVIFYE--SHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGEN 78 (347)
T ss_dssp CCSE-EEEEEESS--TTCCCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEEEECTT
T ss_pred CCcc-cEEEEEeC--CCCCCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEEEECCC
Confidence 5666 67666543 323699999999999999999999999999999999998764 2467899999999999999999
Q ss_pred CCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccc
Q 018158 84 VKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPL 163 (360)
Q Consensus 84 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l 163 (360)
|++|++||||++.+....|+.|.+|+.|++++|.+..+ .| ...+|+|+||+.+|+++++++|+++++++|+++
T Consensus 79 v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~--~g-----~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l 151 (347)
T 2hcy_A 79 VKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADL--SG-----YTHDGSFQQYATADAVQAAHIPQGTDLAQVAPI 151 (347)
T ss_dssp CCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEE--BT-----TTBCCSSBSEEEEETTTSEEECTTCCHHHHGGG
T ss_pred CCCCcCCCEEEEecCCCCCCCChhhhCCCcccCccccc--cc-----cCCCCcceeEEEeccccEEECCCCCCHHHHHHH
Confidence 99999999999876666799999999999999987532 22 246799999999999999999999999999999
Q ss_pred cchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH---
Q 018158 164 LCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA--- 239 (360)
Q Consensus 164 ~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--- 239 (360)
++.+.|||+++.... +++|+++||+|+ |++|++++|+++..|++|+++++++++++.+++ +|+++++|+.+.
T Consensus 152 ~~~~~ta~~~l~~~~---~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~-~g~~~~~d~~~~~~~ 227 (347)
T 2hcy_A 152 LCAGITVYKALKSAN---LMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS-IGGEVFIDFTKEKDI 227 (347)
T ss_dssp GTHHHHHHHHHHTTT---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH-TTCCEEEETTTCSCH
T ss_pred hhhHHHHHHHHHhcC---CCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH-cCCceEEecCccHhH
Confidence 999999999998763 559999999999 999999999999999999999999999988888 999988886632
Q ss_pred -HHHHhc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeecCCHHHHHHHHHH
Q 018158 240 -MQMQAG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTGGMRETQEMMNV 316 (360)
Q Consensus 240 -~~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 316 (360)
+.+... ..++|++||++|....+..++++++++|+++.+|...+ ...++...++.+++++.++.....+++++++++
T Consensus 228 ~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l 307 (347)
T 2hcy_A 228 VGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREALDF 307 (347)
T ss_dssp HHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCCCHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCCCHHHHHHHHHH
Confidence 122221 23899999999986678999999999999999998763 355666778889999999988888899999999
Q ss_pred HhcCCCccceEEECCccHHHHHHHHHcCCCceeEEEecC
Q 018158 317 CGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 317 l~~~~l~~~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
+.++++++.+++|+++++++|++.+.+++..||+|++++
T Consensus 308 ~~~g~l~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 346 (347)
T 2hcy_A 308 FARGLVKSPIKVVGLSTLPEIYEKMEKGQIVGRYVVDTS 346 (347)
T ss_dssp HHTTSCCCCEEEEEGGGHHHHHHHHHTTCCSSEEEEESC
T ss_pred HHhCCCccceEEEcHHHHHHHHHHHHcCCcceeEEEecC
Confidence 999999988899999999999999999888899999886
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-57 Score=417.95 Aligned_cols=328 Identities=24% Similarity=0.321 Sum_probs=269.8
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC--CCCCCCccccccceEEEEecCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG--ITMYPVVPGHEITGIITKVGSNVKNF 87 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~--~~~~p~~~G~e~~G~V~~vG~~v~~~ 87 (360)
||++++.. +.++++++++|.|+|+++||+|||++++||++|++.+.|.++ ...+|.++|||++|+|+++|++ ++|
T Consensus 4 mka~~~~~--~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~~ 80 (344)
T 2h6e_A 4 SKAALLKK--FSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AKV 80 (344)
T ss_dssp EEBCEECS--CCC-----EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CCC
T ss_pred eEEEEEec--CCCCCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CCC
Confidence 66655533 334699999999999999999999999999999999998775 3467999999999999999999 999
Q ss_pred CCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEee-cceeEECCCCCCccccccccch
Q 018158 88 KVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVAD-YRFVVHVPENIAMDAAAPLLCA 166 (360)
Q Consensus 88 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~-~~~~~~iP~~~~~~~aa~l~~~ 166 (360)
++||||+.. ...+|+.|.+|+.|++++|.+... .|...+|+|+||+.+| +++++++ +++++++||+++++
T Consensus 81 ~~GdrV~~~-~~~~Cg~C~~C~~g~~~~C~~~~~-------~G~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~ 151 (344)
T 2h6e_A 81 KKGDNVVVY-ATWGDLTCRYCREGKFNICKNQII-------PGQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADA 151 (344)
T ss_dssp CTTCEEEEC-SCBCCSCSTTGGGTCGGGCTTCBC-------BTTTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTH
T ss_pred CCCCEEEEC-CCCCCCCChhhhCCCcccCCCccc-------cccccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhh
Confidence 999999654 455899999999999999987521 2234679999999999 9999999 99999999999999
Q ss_pred hhhhhchhhcc-----CCCCCCCCcEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHcCCCeEeeCcc-
Q 018158 167 GITVFCPMKDN-----NLIDSPAKKRIGIVGLGGLGHVAVKFGKAF--GHHVTVISTSPSKEKEAKELLGADEFILSTN- 238 (360)
Q Consensus 167 ~~ta~~~l~~~-----~~~~~~~~~~vlI~Gag~vG~~aiqla~~~--G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~- 238 (360)
+.|||+++... . + +|++|||+|+|++|++++|+||.+ |++|+++++++++++.+++ +|+++++++.+
T Consensus 152 ~~ta~~al~~~~~~~~~---~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~vi~~~~~ 226 (344)
T 2h6e_A 152 GTTSMGAIRQALPFISK---F-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE-LGADYVSEMKDA 226 (344)
T ss_dssp HHHHHHHHHHHHHHHTT---C-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH-HTCSEEECHHHH
T ss_pred hHHHHHHHHhhhhcccC---C-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH-hCCCEEeccccc
Confidence 99999999876 4 7 899999999999999999999999 9999999999999999998 99999998876
Q ss_pred HHHHHhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHH
Q 018158 239 AMQMQAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNV 316 (360)
Q Consensus 239 ~~~~~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 316 (360)
.+..... +.++|++||++|....+..++++++++|+++.+|.......++...++.+++++.++.....+++++++++
T Consensus 227 ~~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l 306 (344)
T 2h6e_A 227 ESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRL 306 (344)
T ss_dssp HHHHHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHHHTTCEEEECCSCCHHHHHHHHHH
T ss_pred hHHHHHhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCCcccCHHHHhhCCcEEEEEecCCHHHHHHHHHH
Confidence 4333332 45899999999988678999999999999999998766666777778889999999988888899999999
Q ss_pred HhcCCCccceEEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 317 CGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 317 l~~~~l~~~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+.++++++.+++|+|+++++|++.+++++..||+|+++
T Consensus 307 ~~~g~i~~~i~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 344 (344)
T 2h6e_A 307 SESGKIKPYIIKVPLDDINKAFTNLDEGRVDGRQVITP 344 (344)
T ss_dssp HHTTSSCCCEEEECC----------------CEEEECC
T ss_pred HHcCCCCcceEEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence 99999988779999999999999999988889999864
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-57 Score=421.78 Aligned_cols=337 Identities=20% Similarity=0.325 Sum_probs=287.8
Q ss_pred CCCcccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCC
Q 018158 5 TPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNV 84 (360)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v 84 (360)
+|.+ |||.++. +++.++++++|.|+|++|||+|||++++||++|++++.|.+ ...+|.++|||++|+|+++|++|
T Consensus 20 ~p~~-mkA~v~~---~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~-~~~~p~v~G~e~~G~V~~vG~~v 94 (370)
T 4ej6_A 20 FQSM-MKAVRLE---SVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEF-PSTPPVTLGHEFCGIVVEAGSAV 94 (370)
T ss_dssp -CCE-EEEEEEE---ETTEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSS-CCCSSEECCCSEEEEEEEECTTC
T ss_pred cchh-eEEEEEe---cCCceEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCC-CCCCCeecCcceEEEEEEECCCC
Confidence 5666 6766653 23689999999999999999999999999999999999987 56789999999999999999999
Q ss_pred CCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCcccccccc
Q 018158 85 KNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLL 164 (360)
Q Consensus 85 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~ 164 (360)
++|++||||++.+. ..|+.|.+|..|+++.|.+... .|...+|+|+||+.++++.++++|+++++++|| ++
T Consensus 95 ~~~~vGdrV~~~~~-~~cg~C~~C~~g~~~~C~~~~~-------~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa-l~ 165 (370)
T 4ej6_A 95 RDIAPGARITGDPN-ISCGRCPQCQAGRVNLCRNLRA-------IGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA-FC 165 (370)
T ss_dssp CSSCTTCEEEECCE-ECCSSSHHHHTTCGGGCTTCEE-------BTTTBCCSSBSEEEEEGGGEEEECTTSCTTGGG-GH
T ss_pred CCCCCCCEEEECCC-CCCCCChHHhCcCcccCCCccc-------cCCCCCCcceEEEEEchhhEEECCCCCCHHHHh-hh
Confidence 99999999988665 6899999999999999998532 233567999999999999999999999999987 77
Q ss_pred chhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH-
Q 018158 165 CAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQM- 242 (360)
Q Consensus 165 ~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~- 242 (360)
.++.+||+++.... +++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+++ +|+++++|+.+.+..
T Consensus 166 ~~~~ta~~~l~~~~---~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-lGa~~vi~~~~~~~~~ 241 (370)
T 4ej6_A 166 EPLACCLHGVDLSG---IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEE-VGATATVDPSAGDVVE 241 (370)
T ss_dssp HHHHHHHHHHHHHT---CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH-HTCSEEECTTSSCHHH
T ss_pred hHHHHHHHHHHhcC---CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-cCCCEEECCCCcCHHH
Confidence 78999999996544 5599999999999999999999999999 89999999999999998 999999998765322
Q ss_pred --Hh---c-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC--CcccChhhHhccCcEEEEeecCCHHHHHHHH
Q 018158 243 --QA---G-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA--PFELPSFPLIFGKRSVKGSMTGGMRETQEMM 314 (360)
Q Consensus 243 --~~---~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 314 (360)
.. . ++++|+||||+|....+..++++++++|+++.+|.... ...++...++.+++++.|+.... .++++++
T Consensus 242 ~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~-~~~~~~~ 320 (370)
T 4ej6_A 242 AIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINP-FVHRRAA 320 (370)
T ss_dssp HHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCT-TCHHHHH
T ss_pred HHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEeccCh-HHHHHHH
Confidence 22 1 34899999999987788999999999999999998765 56778888999999999988765 5699999
Q ss_pred HHHhcCCCc--cce-EEECCccHHHHHHHHHcCC-CceeEEEecCCCcCC
Q 018158 315 NVCGKYNIT--CNI-EVIKPDQINEALDRLARND-VRYRFVIDIAGGARE 360 (360)
Q Consensus 315 ~~l~~~~l~--~~i-~~~~~~~~~~a~~~~~~~~-~~gkvvi~~~~~~~~ 360 (360)
+++++|+++ +.+ ++|+|+++++|++.+.+++ ..+|+++++.+-.+|
T Consensus 321 ~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~~ia~~ 370 (370)
T 4ej6_A 321 DLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSAERVAQQ 370 (370)
T ss_dssp HHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC-------
T ss_pred HHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEcccccccC
Confidence 999999995 456 8999999999999998876 458999988776554
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-56 Score=413.53 Aligned_cols=339 Identities=23% Similarity=0.344 Sum_probs=282.3
Q ss_pred CCCcccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCC
Q 018158 5 TPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNV 84 (360)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v 84 (360)
+|.+ |++ +...++.+.++++++|.|+|+++||||||++++||++|+++++|.++ ..+|.++|||++|+|+++|++|
T Consensus 6 ~p~~-mka--~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~v 81 (373)
T 1p0f_A 6 KDIT-CKA--AVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVESIGAGV 81 (373)
T ss_dssp SCEE-EEE--EEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEEEEEEECTTC
T ss_pred Ccce-eEE--EEEEcCCCCeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC-CCCCcccCcCceEEEEEECCCC
Confidence 3444 444 44455445799999999999999999999999999999999998764 5679999999999999999999
Q ss_pred CCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccc-ccccc-------------CCCccccceeeEEEeecceeEE
Q 018158 85 KNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTY-NGIFW-------------DGSITYGGYSEMLVADYRFVVH 150 (360)
Q Consensus 85 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~-~g~~~-------------~~~~~~g~~~~~~~v~~~~~~~ 150 (360)
++|++||||++.+. .+|+.|.+|++|+++.|.+..... .|... .+....|+|+||+.+|++++++
T Consensus 82 ~~~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ 160 (373)
T 1p0f_A 82 TCVKPGDKVIPLFV-PQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAK 160 (373)
T ss_dssp CSCCTTCEEEECSS-CCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEE
T ss_pred CccCCCCEEEECCC-CCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchhhEEE
Confidence 99999999988654 589999999999999999753211 12111 1112359999999999999999
Q ss_pred CCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcC
Q 018158 151 VPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLG 229 (360)
Q Consensus 151 iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g 229 (360)
+|++++++ ||++++++.|||+++....+++ +|++|||+|+|++|++++|+||.+|+ +|+++++++++++.+++ +|
T Consensus 161 iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~--~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-lG 236 (373)
T 1p0f_A 161 IDPKAPLE-SCLIGCGFATGYGAAVNTAKVT--PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-LG 236 (373)
T ss_dssp ECTTCCGG-GGGGGTHHHHHHHHHHTTTCCC--TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-TT
T ss_pred CCCCCChh-hhhhhhHHHHHHHHHHhccCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH-cC
Confidence 99999999 9999999999999986655544 99999999999999999999999999 79999999999999998 99
Q ss_pred CCeEeeCcc--H---HHHHhc-CCCcCEEEEcCCCcccHHHHHHHhccC-CEEEEeCCCCC--CcccChhhHhccCcEEE
Q 018158 230 ADEFILSTN--A---MQMQAG-KRTLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPEA--PFELPSFPLIFGKRSVK 300 (360)
Q Consensus 230 ~~~~v~~~~--~---~~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~ 300 (360)
+++++++.+ . +...+. ..++|+|||++|....+..++++++++ |+++.+|.... ...++...++.++ ++.
T Consensus 237 a~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~ 315 (373)
T 1p0f_A 237 ATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGR-SLK 315 (373)
T ss_dssp CSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTC-EEE
T ss_pred CcEEEecccccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhccCc-eEE
Confidence 999998874 1 122222 348999999999876789999999999 99999997653 3456666676777 999
Q ss_pred EeecC--CHHHHHHHHHHHhcCCCc--cce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 301 GSMTG--GMRETQEMMNVCGKYNIT--CNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 301 ~~~~~--~~~~~~~~~~~l~~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
++... ..++++++++++.+|+++ +.+ ++|+|+++++|++.+++++. +|+|+++
T Consensus 316 g~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~ 373 (373)
T 1p0f_A 316 GSVFGGFKGEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG-VRSIMIY 373 (373)
T ss_dssp ECSGGGCCGGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSC-SEEEEEC
T ss_pred eeccCCcCHHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence 88653 346899999999999986 445 89999999999999988775 6999875
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-56 Score=412.65 Aligned_cols=333 Identities=20% Similarity=0.288 Sum_probs=290.8
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC-CCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|+++++...+.+..+++++++.|+|+++||||||++++||++|++++.|.++. ..+|.++|||++|+|+++|++|++|+
T Consensus 1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~ 80 (343)
T 2eih_A 1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFA 80 (343)
T ss_dssp CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEECSSCCSCC
T ss_pred CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEECCCCCCCC
Confidence 46666655444445999999999999999999999999999999999987643 36789999999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||||++.+ ..+|+.|.+|+.|++++|.+..+ .| ...+|+|+||+.+|+++++++|+++++++|+++++++.
T Consensus 81 vGdrV~~~~-~~~cg~c~~C~~g~~~~C~~~~~--~G-----~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ 152 (343)
T 2eih_A 81 PGDEVVINP-GLSCGRCERCLAGEDNLCPRYQI--LG-----EHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFL 152 (343)
T ss_dssp TTCEEEECC-EECCSCSHHHHTTCGGGCTTCEE--TT-----TSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHH
T ss_pred CCCEEEECC-CCCcccchhhccCcccccccccc--cC-----cCCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHH
Confidence 999999877 66899999999999999987532 22 24579999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---HHh
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ---MQA 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~ 244 (360)
|||+++....+++ +|+++||+|+ |++|++++|+++..|++|+++++++++++.+++ +|+++++|+.+.+. ..+
T Consensus 153 ta~~al~~~~~~~--~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~ga~~~~d~~~~~~~~~~~~ 229 (343)
T 2eih_A 153 TAWQMVVDKLGVR--PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA-LGADETVNYTHPDWPKEVRR 229 (343)
T ss_dssp HHHHHHTTTSCCC--TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HTCSEEEETTSTTHHHHHHH
T ss_pred HHHHHHHHhcCCC--CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cCCCEEEcCCcccHHHHHHH
Confidence 9999998765544 9999999999 999999999999999999999999999999988 99999988766422 222
Q ss_pred c--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCc-ccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCC
Q 018158 245 G--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPF-ELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYN 321 (360)
Q Consensus 245 ~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~ 321 (360)
. +.++|++||++| ...+..++++++++|+++.+|...... .++...++.+++++.++.....++++++++++.+|+
T Consensus 230 ~~~~~~~d~vi~~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~ 308 (343)
T 2eih_A 230 LTGGKGADKVVDHTG-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGK 308 (343)
T ss_dssp HTTTTCEEEEEESSC-SSSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEECCSCCGGGHHHHHHHHHHTS
T ss_pred HhCCCCceEEEECCC-HHHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEEecCccHHHHHHHHHHHHcCC
Confidence 2 358999999999 557899999999999999999876432 456667788999999988777888999999999999
Q ss_pred Cccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 322 ITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 322 l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+++.+ ++|+|+++++|++.+++++..||+|+++
T Consensus 309 l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 342 (343)
T 2eih_A 309 LKPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV 342 (343)
T ss_dssp SCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred CCCceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence 99887 8999999999999999988889999986
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-56 Score=413.66 Aligned_cols=342 Identities=20% Similarity=0.338 Sum_probs=284.7
Q ss_pred CCCCCcccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecC
Q 018158 3 QTTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGS 82 (360)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~ 82 (360)
+.+|.+ |++.++ .++.+.++++++|.|+|+++||||||++++||++|++++.|. +...+|.++|||++|+|+++|+
T Consensus 3 ~~~p~~-mka~~~--~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~~~~P~v~GhE~~G~V~~vG~ 78 (376)
T 1e3i_A 3 QGKVIK-CKAAIA--WKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKALFPVVLGHECAGIVESVGP 78 (376)
T ss_dssp TTSCEE-EEEEEB--CSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-SCCCSSBCCCCEEEEEEEEECT
T ss_pred CCCChh-eeEEEE--ecCCCCeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-CCCCCCcccCccccEEEEEECC
Confidence 445655 454443 444446999999999999999999999999999999999886 4456799999999999999999
Q ss_pred CCCCCCCCCEEEeccCccCCCCChhhhCCCCCCccccc----ccc-cccccCC-------------CccccceeeEEEee
Q 018158 83 NVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQ----FTY-NGIFWDG-------------SITYGGYSEMLVAD 144 (360)
Q Consensus 83 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~----~~~-~g~~~~~-------------~~~~g~~~~~~~v~ 144 (360)
+|++|++||||++.+. ..|+.|.+|++|+++.|.+.. +.. .|....+ ....|+|+||+.+|
T Consensus 79 ~v~~~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~ 157 (376)
T 1e3i_A 79 GVTNFKPGDKVIPFFA-PQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVS 157 (376)
T ss_dssp TCCSCCTTCEEEECSS-CCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEE
T ss_pred CCccCCCCCEEEECCc-CCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEEec
Confidence 9999999999988654 589999999999999998743 100 1221111 11359999999999
Q ss_pred cceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHH
Q 018158 145 YRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKE 223 (360)
Q Consensus 145 ~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~ 223 (360)
+++++++|+++++++||++++++.|||+++.+..+++ +|++|||+|+|++|++++|+||.+|+ +|+++++++++++.
T Consensus 158 ~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~--~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~ 235 (376)
T 1e3i_A 158 EANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVT--PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPK 235 (376)
T ss_dssp GGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCC--TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHH
T ss_pred cccEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence 9999999999999999999999999999986655554 99999999999999999999999999 79999999999999
Q ss_pred HHHHcCCCeEeeCcc--H---HHHHhc-CCCcCEEEEcCCCcccHHHHHHHhccC-CEEEEeCCCCCCcccChhhHhccC
Q 018158 224 AKELLGADEFILSTN--A---MQMQAG-KRTLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPEAPFELPSFPLIFGK 296 (360)
Q Consensus 224 ~~~~~g~~~~v~~~~--~---~~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~ 296 (360)
+++ +|+++++|+.+ . +..... ..++|++||++|....+..++++++++ |+++.+|.......++...++.++
T Consensus 236 a~~-lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~ 314 (376)
T 1e3i_A 236 AKA-LGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGR 314 (376)
T ss_dssp HHH-TTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHTTC
T ss_pred HHH-hCCcEEEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCCccccCHHHhhccC
Confidence 988 99999998874 1 122222 348999999999876789999999999 999999985445566666777788
Q ss_pred cEEEEeecC---CHHHHHHHHHHHhcCCCc--cce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 297 RSVKGSMTG---GMRETQEMMNVCGKYNIT--CNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 297 ~~i~~~~~~---~~~~~~~~~~~l~~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
++.++... ..++++++++++.+++++ +.+ ++|+|+++++|++.+++++. +|+|+++
T Consensus 315 -~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~ 376 (376)
T 1e3i_A 315 -SINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKS-IRTILTF 376 (376)
T ss_dssp -EEEECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred -eEEEEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCCc-ceEEEeC
Confidence 99988653 356899999999999986 355 89999999999999998874 7999875
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-56 Score=415.93 Aligned_cols=337 Identities=18% Similarity=0.234 Sum_probs=284.3
Q ss_pred CCCCCCCcccceeEEeccCCCCCceEEEEeCC--------CCCCCeEEEEEeeeecccchhhhhccCC-C--CCCCCCcc
Q 018158 1 MAQTTPNHTQSVVGWAAHDPSGKITPYIFKRR--------ENGVNDVTIKILYCGICHTDIHHVKNDW-G--ITMYPVVP 69 (360)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p--------~~~~~evlVkv~~~~i~~~D~~~~~g~~-~--~~~~p~~~ 69 (360)
|.+++|.+ |+|+++ .+++.++++++|.| +|+++||||||++++||++|++++++.. + ...+|.++
T Consensus 1 m~~~~~~~-mka~~~---~~~~~l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~ 76 (363)
T 3m6i_A 1 MASSASKT-NIGVFT---NPQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVL 76 (363)
T ss_dssp ----CCSC-CEEEEE---CTTCCEEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEEC
T ss_pred CCCCCccc-ceeEEE---eCCCcEEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCccc
Confidence 55667777 666655 35688999999999 9999999999999999999999887432 2 34678999
Q ss_pred ccccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeE
Q 018158 70 GHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVV 149 (360)
Q Consensus 70 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~ 149 (360)
|||++|+|+++|++|++|++||||++.+. .+|+.|.+|+.|.++.|.+..+. |. ...+|+|+||+.+|+++++
T Consensus 77 G~E~~G~V~~vG~~v~~~~vGdrV~~~~~-~~cg~C~~c~~g~~~~c~~~~~~--g~----~~~~G~~aey~~v~~~~~~ 149 (363)
T 3m6i_A 77 GHESAGEVIAVHPSVKSIKVGDRVAIEPQ-VICNACEPCLTGRYNGCERVDFL--ST----PPVPGLLRRYVNHPAVWCH 149 (363)
T ss_dssp CCEEEEEEEEECTTCCSCCTTCEEEECCE-ECCSCSHHHHTTCGGGCTTCEET--TS----TTSCCSCBSEEEEEGGGEE
T ss_pred CcceEEEEEEECCCCCCCCCCCEEEEecc-cCCCCCHHHHCcCcccCCCcccc--CC----CCCCccceeEEEEehhhEE
Confidence 99999999999999999999999988664 58999999999999999985432 21 1367999999999999999
Q ss_pred ECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHc
Q 018158 150 HVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELL 228 (360)
Q Consensus 150 ~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~ 228 (360)
++|+ +++++||++ ..+.|||++++... +++|++|||+|+|++|++++|+||.+|++ |+++++++++++.+++ +
T Consensus 150 ~iP~-~s~~~aa~~-~~~~ta~~~l~~~~---~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l 223 (363)
T 3m6i_A 150 KIGN-MSYENGAML-EPLSVALAGLQRAG---VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-I 223 (363)
T ss_dssp ECTT-CCHHHHHHH-HHHHHHHHHHHHHT---CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-H
T ss_pred ECCC-CCHHHHHhh-hHHHHHHHHHHHcC---CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h
Confidence 9999 999999987 47789999996544 55999999999999999999999999997 9999999999999999 7
Q ss_pred CCCeEeeCc----c-HH---HHHhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcE
Q 018158 229 GADEFILST----N-AM---QMQAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRS 298 (360)
Q Consensus 229 g~~~~v~~~----~-~~---~~~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 298 (360)
+++++++. + .+ ..... ++++|++||++|....+..++++++++|+++.+|.......++...++.++++
T Consensus 224 -~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~ 302 (363)
T 3m6i_A 224 -CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVD 302 (363)
T ss_dssp -CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSCCCCCHHHHHHHTCE
T ss_pred -chhcccccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCCccccHHHHHhcCcE
Confidence 65555543 1 21 12222 67899999999998778999999999999999998776677788888999999
Q ss_pred EEEeecCCHHHHHHHHHHHhcCCC--ccce-EEECCccHHHHHHHHHcC-CCceeEEEecCC
Q 018158 299 VKGSMTGGMRETQEMMNVCGKYNI--TCNI-EVIKPDQINEALDRLARN-DVRYRFVIDIAG 356 (360)
Q Consensus 299 i~~~~~~~~~~~~~~~~~l~~~~l--~~~i-~~~~~~~~~~a~~~~~~~-~~~gkvvi~~~~ 356 (360)
+.++... .++++++++++++|++ .+.+ ++|+|+++++|++.+.++ ...+|+|++.++
T Consensus 303 i~g~~~~-~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~ 363 (363)
T 3m6i_A 303 LQFQYRY-CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSLE 363 (363)
T ss_dssp EEECCSC-SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC-
T ss_pred EEEccCC-HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence 9998776 6789999999999998 4556 899999999999999997 567899999863
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-56 Score=412.14 Aligned_cols=332 Identities=21% Similarity=0.301 Sum_probs=282.7
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccC-CC--CCCCCCccccccceEEEEecCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKND-WG--ITMYPVVPGHEITGIITKVGSNVKN 86 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~-~~--~~~~p~~~G~e~~G~V~~vG~~v~~ 86 (360)
|++.++. + ++.++++++|.|+|+++||||||++++||++|++++.|. .+ ...+|.++|||++|+|+++|++|++
T Consensus 8 mka~~~~--~-~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~~ 84 (356)
T 1pl8_A 8 NLSLVVH--G-PGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKH 84 (356)
T ss_dssp CEEEEEE--E-TTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCS
T ss_pred ceEEEEe--c-CCcEEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCCC
Confidence 6655553 3 468999999999999999999999999999999988753 21 1356899999999999999999999
Q ss_pred CCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccch
Q 018158 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCA 166 (360)
Q Consensus 87 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~ 166 (360)
|++||||++.+. .+|+.|.+|+.|+++.|.+..+ .|.. ..+|+|+||+.+|+++++++|+++++++|+.+ ..
T Consensus 85 ~~vGdrV~~~~~-~~cg~C~~C~~g~~~~C~~~~~--~g~~----~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~-~~ 156 (356)
T 1pl8_A 85 LKPGDRVAIEPG-APRENDEFCKMGRYNLSPSIFF--CATP----PDDGNLCRFYKHNAAFCYKLPDNVTFEEGALI-EP 156 (356)
T ss_dssp CCTTCEEEECSE-ECSSCCHHHHTTCGGGCTTCEE--TTBT----TBCCSCBSEEEEEGGGEEECCTTSCHHHHHHH-HH
T ss_pred CCCCCEEEEecc-CCCCCChHHHCcCcccCCCccc--cCcC----CCCCccccEEEeehHHEEECcCCCCHHHHHhh-ch
Confidence 999999988655 5799999999999999997532 2211 34699999999999999999999999998865 57
Q ss_pred hhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCc---cHHHH
Q 018158 167 GITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILST---NAMQM 242 (360)
Q Consensus 167 ~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~---~~~~~ 242 (360)
+.|||++++... +++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+++ +|++++++++ +.+..
T Consensus 157 ~~ta~~al~~~~---~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-lGa~~vi~~~~~~~~~~~ 232 (356)
T 1pl8_A 157 LSVGIHACRRGG---VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE-IGADLVLQISKESPQEIA 232 (356)
T ss_dssp HHHHHHHHHHHT---CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-TTCSEEEECSSCCHHHHH
T ss_pred HHHHHHHHHhcC---CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hCCCEEEcCcccccchHH
Confidence 789999996544 5599999999999999999999999999 89999999999999998 9999999987 23222
Q ss_pred H---hc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHh
Q 018158 243 Q---AG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCG 318 (360)
Q Consensus 243 ~---~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~ 318 (360)
. .. ++++|++||++|....+..++++++++|+++.+|.......++...++.+++++.++... .++++++++++.
T Consensus 233 ~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~-~~~~~~~~~l~~ 311 (356)
T 1pl8_A 233 RKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRY-CNTWPVAISMLA 311 (356)
T ss_dssp HHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSC-SSCHHHHHHHHH
T ss_pred HHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHhcceEEEEeccc-HHHHHHHHHHHH
Confidence 1 11 368999999999877789999999999999999986555667777788999999998765 467999999999
Q ss_pred cCCCc--cce-EEECCccHHHHHHHHHcCCCceeEEEecCCCc
Q 018158 319 KYNIT--CNI-EVIKPDQINEALDRLARNDVRYRFVIDIAGGA 358 (360)
Q Consensus 319 ~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~~ 358 (360)
+|+++ +.+ ++|+++++++|++.++++ ..||+|+++++++
T Consensus 312 ~g~i~~~~~i~~~~~l~~~~~A~~~~~~~-~~gKvvi~~~~~~ 353 (356)
T 1pl8_A 312 SKSVNVKPLVTHRFPLEKALEAFETFKKG-LGLKIMLKCDPSD 353 (356)
T ss_dssp TTSCCCGGGEEEEEEGGGHHHHHHHHHTT-CCSEEEEECCTTC
T ss_pred cCCCChHHheEEEecHHHHHHHHHHHhCC-CceEEEEeCCCCC
Confidence 99874 556 899999999999999988 7799999997665
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-56 Score=413.16 Aligned_cols=329 Identities=21% Similarity=0.253 Sum_probs=271.2
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhcc-CCC--CCCCCCccccccceEEEEecCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKN-DWG--ITMYPVVPGHEITGIITKVGSNVKN 86 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g-~~~--~~~~p~~~G~e~~G~V~~vG~~v~~ 86 (360)
|++.++...+ ..++++++|.|+|+++||||||++++||++|+++++| .++ ...+|.++|||++|+|+++|++|++
T Consensus 5 mka~~~~~~g--~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~ 82 (348)
T 2d8a_A 5 MVAIMKTKPG--YGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEG 82 (348)
T ss_dssp EEEEEECSSS--SSCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTCCS
T ss_pred ceEEEEECCC--CCEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCCCc
Confidence 6766653332 2899999999999999999999999999999999998 432 2467899999999999999999999
Q ss_pred CCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccch
Q 018158 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCA 166 (360)
Q Consensus 87 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~ 166 (360)
|++||||++.+. .+|+.|.+|++|++++|++..+ . |...+|+|+||+++|++.++++|+++++++||++. .
T Consensus 83 ~~vGdrV~~~~~-~~cg~C~~C~~g~~~~C~~~~~--~-----g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~-~ 153 (348)
T 2d8a_A 83 IEVGDYVSVETH-IVCGKCYACRRGQYHVCQNTKI--F-----GVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQE-P 153 (348)
T ss_dssp CCTTCEEEECCE-ECCSCCC------------CEE--T-----TTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHH-H
T ss_pred CCCCCEEEEcCC-CCCCCChhhhCcCcccCCCCCe--e-----cCCCCCcCcceEEeChHHeEECCCCCCHHHHHhhh-H
Confidence 999999988664 4899999999999999997532 1 22467999999999999999999999999999875 7
Q ss_pred hhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---H
Q 018158 167 GITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQ---M 242 (360)
Q Consensus 167 ~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~ 242 (360)
+.|||+++.... + +|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+++ +|+++++++++.+. .
T Consensus 154 ~~ta~~~l~~~~---~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-~Ga~~~~~~~~~~~~~~v 228 (348)
T 2d8a_A 154 LGNAVDTVLAGP---I-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK-VGADYVINPFEEDVVKEV 228 (348)
T ss_dssp HHHHHHHHTTSC---C-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH-HTCSEEECTTTSCHHHHH
T ss_pred HHHHHHHHHhcC---C-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hCCCEEECCCCcCHHHHH
Confidence 789999996544 7 99999999999999999999999999 89999999999999988 99999998865422 2
Q ss_pred Hhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccCh-hhHhccCcEEEEeecCC-HHHHHHHHHHHh
Q 018158 243 QAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPS-FPLIFGKRSVKGSMTGG-MRETQEMMNVCG 318 (360)
Q Consensus 243 ~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~~-~~~~~~~~~~l~ 318 (360)
.+. +.++|++||++|....+..++++++++|+++.+|.......++. ..++.+++++.++.... .++++++++++.
T Consensus 229 ~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~ 308 (348)
T 2d8a_A 229 MDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQ 308 (348)
T ss_dssp HHHTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHTTTTTCEEEECCCCCSHHHHHHHHHHHH
T ss_pred HHHcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCcccCchHHHHhCCcEEEEecCCCcHHHHHHHHHHHH
Confidence 222 45899999999986678999999999999999998766566676 67788999999987766 788999999999
Q ss_pred cCCC--ccce-EEEC-CccHHHHHHHHHcCCCceeEEEecC
Q 018158 319 KYNI--TCNI-EVIK-PDQINEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 319 ~~~l--~~~i-~~~~-~~~~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
+|++ ++.+ ++|+ |+++++|++.+++ +..||+|++++
T Consensus 309 ~g~i~~~~~i~~~~~gl~~~~~A~~~~~~-~~~gKvvi~~~ 348 (348)
T 2d8a_A 309 SGKLNLDPIITHKYKGFDKYEEAFELMRA-GKTGKVVFMLK 348 (348)
T ss_dssp HTCCCCTTTEEEEEESSTTHHHHHHHHHT-TCCSEEEEEC-
T ss_pred cCCCChHHhheeeCCCHHHHHHHHHHHhC-CCceEEEEeeC
Confidence 9995 5566 8999 9999999999987 55799999864
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-56 Score=412.31 Aligned_cols=342 Identities=22% Similarity=0.328 Sum_probs=285.4
Q ss_pred CCCCcccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCC
Q 018158 4 TTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSN 83 (360)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~ 83 (360)
++|.+ |++.++ .++.++++++++|.|+|+++||+|||++++||++|++++.|.++...+|.++|||++|+|+++|++
T Consensus 2 ~~p~~-mkA~~~--~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~ 78 (373)
T 2fzw_A 2 NEVIK-CKAAVA--WEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEG 78 (373)
T ss_dssp CCCEE-EEEEEB--CSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTT
T ss_pred CCccc-eEEEEE--ecCCCCcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCCCCCCccccccccEEEEEECCC
Confidence 45655 554443 444457999999999999999999999999999999999997755567999999999999999999
Q ss_pred CCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccc-cccc-------------cCCCccccceeeEEEeecceeE
Q 018158 84 VKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTY-NGIF-------------WDGSITYGGYSEMLVADYRFVV 149 (360)
Q Consensus 84 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~-~g~~-------------~~~~~~~g~~~~~~~v~~~~~~ 149 (360)
|++|++||||++.+. .+|+.|.+|++|+++.|.+..... .|.. ..+....|+|+||+++|+++++
T Consensus 79 V~~~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~ 157 (373)
T 2fzw_A 79 VTKLKAGDTVIPLYI-PQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVA 157 (373)
T ss_dssp CCSCCTTCEEEECSS-CCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEE
T ss_pred CCCCCCCCEEEECCC-CCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhheE
Confidence 999999999988654 589999999999999998743210 0111 1111245999999999999999
Q ss_pred ECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHc
Q 018158 150 HVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELL 228 (360)
Q Consensus 150 ~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~ 228 (360)
++|+++++++||++++++.|||+++.+..+++ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+++ +
T Consensus 158 ~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~--~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~-l 234 (373)
T 2fzw_A 158 KIDPLAPLDKVCLLGCGISTGYGAAVNTAKLE--PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE-F 234 (373)
T ss_dssp ECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCC--TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-H
T ss_pred ECCCCCCHHHHhhhccHHHHHHHHHHhhcCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-c
Confidence 99999999999999999999999986655554 99999999999999999999999999 79999999999999998 9
Q ss_pred CCCeEeeCcc--H---HHHHhc-CCCcCEEEEcCCCcccHHHHHHHhccC-CEEEEeCCCCC--CcccChhhHhccCcEE
Q 018158 229 GADEFILSTN--A---MQMQAG-KRTLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPEA--PFELPSFPLIFGKRSV 299 (360)
Q Consensus 229 g~~~~v~~~~--~---~~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i 299 (360)
|+++++++.+ . +..... ..++|++||++|....+..++++++++ |+++.+|.... ...++...++.++ ++
T Consensus 235 Ga~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i 313 (373)
T 2fzw_A 235 GATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGR-TW 313 (373)
T ss_dssp TCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EE
T ss_pred CCceEeccccccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHhcCC-EE
Confidence 9999998764 1 122222 348999999999876789999999999 99999997653 3456666677777 99
Q ss_pred EEeecC---CHHHHHHHHHHHhcCCCc--cce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 300 KGSMTG---GMRETQEMMNVCGKYNIT--CNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 300 ~~~~~~---~~~~~~~~~~~l~~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
.++... ..++++++++++.+++++ +.+ ++|+|+++++|++.+++++. +|+|+++
T Consensus 314 ~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~ 373 (373)
T 2fzw_A 314 KGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IRTVVKI 373 (373)
T ss_dssp EECSGGGCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SEEEEEC
T ss_pred EEeccCCCCcHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ceEEEeC
Confidence 988654 257899999999999986 455 89999999999999998876 6999875
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-56 Score=412.16 Aligned_cols=336 Identities=21% Similarity=0.333 Sum_probs=283.2
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
||+.++ .++.++++++++|.|+|+++||||||++++||++|++++.|.++ ..+|.++|||++|+|+++|++|++|++
T Consensus 7 mka~~~--~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~v~~~~~ 83 (371)
T 1f8f_A 7 IIAAVT--PCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTELQV 83 (371)
T ss_dssp EEEEEB--CSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCCSCCT
T ss_pred ceEEEE--cCCCCCeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC-CCCCcccCcccceEEEEeCCCCCCCCC
Confidence 555544 44434699999999999999999999999999999999999763 567999999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccc-cccc-----cc----cCC------CccccceeeEEEeecceeEECCC
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQF-TYNG-----IF----WDG------SITYGGYSEMLVADYRFVVHVPE 153 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~-~~~g-----~~----~~~------~~~~g~~~~~~~v~~~~~~~iP~ 153 (360)
||||++.+ .+|+.|.+|++|+++.|.+... .+.| .. ..| ....|+|+||+.+++++++++|+
T Consensus 84 GdrV~~~~--~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~iP~ 161 (371)
T 1f8f_A 84 GDHVVLSY--GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTK 161 (371)
T ss_dssp TCEEEECC--CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECT
T ss_pred CCEEEecC--CCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEECCC
Confidence 99998876 7899999999999999987531 1111 00 001 12369999999999999999999
Q ss_pred CCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCe
Q 018158 154 NIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADE 232 (360)
Q Consensus 154 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~ 232 (360)
++++++||++++++.|||+++.....++ +|++|||+|+|++|++++|+||.+|+ +|+++++++++++.+++ +|+++
T Consensus 162 ~~~~~~aa~l~~~~~ta~~al~~~~~~~--~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~-lGa~~ 238 (371)
T 1f8f_A 162 DVPIELLGPLGCGIQTGAGACINALKVT--PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ-LGATH 238 (371)
T ss_dssp TSCGGGTGGGGTHHHHHHHHHHTTTCCC--TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH-HTCSE
T ss_pred CCCHHHHHHhcchHHHHHHHHHhccCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH-cCCCE
Confidence 9999999999999999999996555544 99999999999999999999999999 69999999999999988 99999
Q ss_pred EeeCccHH---HHHhc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC--CcccChhhHhccCcEEEEeecCC
Q 018158 233 FILSTNAM---QMQAG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA--PFELPSFPLIFGKRSVKGSMTGG 306 (360)
Q Consensus 233 ~v~~~~~~---~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~ 306 (360)
++++.+.+ ..... ..++|++||++|....+..++++++++|+++.+|.... ...++...++.+++++.++....
T Consensus 239 vi~~~~~~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 318 (371)
T 1f8f_A 239 VINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGS 318 (371)
T ss_dssp EEETTTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGG
T ss_pred EecCCccCHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhCCCEEEEeCCCC
Confidence 99987642 22222 23899999999987678999999999999999998652 35667777888999999987542
Q ss_pred ---HHHHHHHHHHHhcCCCcc--ce-EEECCccHHHHHHHHHcCCCceeEEEecC
Q 018158 307 ---MRETQEMMNVCGKYNITC--NI-EVIKPDQINEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 307 ---~~~~~~~~~~l~~~~l~~--~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
.++++++++++++|++++ .+ + |+|+++++|++.+++++. +|+|+++.
T Consensus 319 ~~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~-~Kvvv~~~ 371 (371)
T 1f8f_A 319 GSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT-LKPIIKIA 371 (371)
T ss_dssp SCHHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSC-SEEEEECC
T ss_pred CchHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCc-eEEEEeeC
Confidence 467899999999999975 45 6 999999999999998876 79999863
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-55 Score=409.64 Aligned_cols=342 Identities=20% Similarity=0.320 Sum_probs=284.2
Q ss_pred CCCCCcccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecC
Q 018158 3 QTTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGS 82 (360)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~ 82 (360)
+..|.+ |++.++ .++.++++++++|.|+|+++||||||++++||++|++++.|.++. .+|.++|||++|+|+++|+
T Consensus 3 ~~~~~~-mkA~~~--~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~P~v~GhE~~G~V~~vG~ 78 (374)
T 2jhf_A 3 AGKVIK-CKAAVL--WEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT-PLPVIAGHEAAGIVESIGE 78 (374)
T ss_dssp TTSCEE-EEEEEB--CSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-CSSBCCCCSEEEEEEEECT
T ss_pred CCCcee-EEEEEE--ecCCCceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCC-CCCcccCcCceEEEEEECC
Confidence 345555 554443 444456999999999999999999999999999999999987643 3799999999999999999
Q ss_pred CCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccc-ccccc-------------CCCccccceeeEEEeeccee
Q 018158 83 NVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTY-NGIFW-------------DGSITYGGYSEMLVADYRFV 148 (360)
Q Consensus 83 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~-~g~~~-------------~~~~~~g~~~~~~~v~~~~~ 148 (360)
+|++|++||||++.+. .+|+.|.+|++|++++|.+..... .|... .+....|+|+||+.+|++++
T Consensus 79 ~v~~~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~ 157 (374)
T 2jhf_A 79 GVTTVRPGDKVIPLFT-PQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISV 157 (374)
T ss_dssp TCCSCCTTCEEEECSS-CCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGE
T ss_pred CCCCCCCCCEEEECCC-CCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHe
Confidence 9999999999988664 589999999999999999753211 12111 11123599999999999999
Q ss_pred EECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHH
Q 018158 149 VHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKEL 227 (360)
Q Consensus 149 ~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~ 227 (360)
+++|+++++++||++++++.|||+++.+...++ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+++
T Consensus 158 ~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~--~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~- 234 (374)
T 2jhf_A 158 AKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVT--QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE- 234 (374)
T ss_dssp EECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCC--TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-
T ss_pred EECCCCCCHHHhhhhccHHHHHHHHHHhccCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-
Confidence 999999999999999999999999986655554 99999999999999999999999999 79999999999999988
Q ss_pred cCCCeEeeCcc--H---HHHHhc-CCCcCEEEEcCCCcccHHHHHHHhccC-CEEEEeCCCCC--CcccChhhHhccCcE
Q 018158 228 LGADEFILSTN--A---MQMQAG-KRTLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPEA--PFELPSFPLIFGKRS 298 (360)
Q Consensus 228 ~g~~~~v~~~~--~---~~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~ 298 (360)
+|+++++|+.+ . +..... ..++|++||++|....+..++++++++ |+++.+|.... ...++...++.++ +
T Consensus 235 lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~ 313 (374)
T 2jhf_A 235 VGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGR-T 313 (374)
T ss_dssp TTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-E
T ss_pred hCCceEecccccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhcCC-e
Confidence 99999998764 1 122222 348999999999876789999999999 99999997653 3456666677777 9
Q ss_pred EEEeecC---CHHHHHHHHHHHhcCCCc--cce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 299 VKGSMTG---GMRETQEMMNVCGKYNIT--CNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 299 i~~~~~~---~~~~~~~~~~~l~~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+.++... ..++++++++++.+|+++ +.+ ++|+|+++++|++.+.+++. +|+|+++
T Consensus 314 i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~ 374 (374)
T 2jhf_A 314 WKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-IRTILTF 374 (374)
T ss_dssp EEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred EEEeccCCCChHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence 9988653 256899999999999986 345 89999999999999998875 6999875
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-55 Score=410.07 Aligned_cols=342 Identities=23% Similarity=0.343 Sum_probs=285.2
Q ss_pred CCCCCcccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhh-hhccCCCCCCCCCccccccceEEEEec
Q 018158 3 QTTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIH-HVKNDWGITMYPVVPGHEITGIITKVG 81 (360)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~-~~~g~~~~~~~p~~~G~e~~G~V~~vG 81 (360)
+..|.+ |++.++ .++.++++++++|.|+|+++||||||++++||++|++ ++.|.++ ..+|.++|||++|+|+++|
T Consensus 3 ~~~~~~-mka~~~--~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~P~v~GhE~~G~V~~vG 78 (374)
T 1cdo_A 3 VGKVIK-CKAAVA--WEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK-DGFPVVLGHEGAGIVESVG 78 (374)
T ss_dssp TTSCEE-EEEEEB--CSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT-TSCSEECCCCEEEEEEEEC
T ss_pred CCCcce-eEEEEE--ecCCCCeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC-CCCCcccCccceEEEEEEC
Confidence 445655 555444 4444469999999999999999999999999999999 8888764 5678999999999999999
Q ss_pred CCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccc-cccccCC-------------CccccceeeEEEeecce
Q 018158 82 SNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTY-NGIFWDG-------------SITYGGYSEMLVADYRF 147 (360)
Q Consensus 82 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~-~g~~~~~-------------~~~~g~~~~~~~v~~~~ 147 (360)
++|++|++||||++.+. .+|+.|.+|++|+++.|.+..... .|....+ ....|+|+||+.+|+++
T Consensus 79 ~~V~~~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~ 157 (374)
T 1cdo_A 79 PGVTEFQPGEKVIPLFI-SQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIA 157 (374)
T ss_dssp TTCCSCCTTCEEEECSS-CCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGG
T ss_pred CCCccCCCCCEEEeCCC-CCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhh
Confidence 99999999999988654 589999999999999998753211 1211111 11359999999999999
Q ss_pred eEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHH
Q 018158 148 VVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKE 226 (360)
Q Consensus 148 ~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~ 226 (360)
++++|+++++++||++++++.|||+++.+...++ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+++
T Consensus 158 ~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~--~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 235 (374)
T 1cdo_A 158 VAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVE--PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV 235 (374)
T ss_dssp EEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCC--TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred eEECCCCCCHHHHhhhccHHHHHHHHHHhccCCC--CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 9999999999999999999999999986655544 99999999999999999999999999 79999999999999998
Q ss_pred HcCCCeEeeCcc--H---HHHHhc-CCCcCEEEEcCCCcccHHHHHHHhccC-CEEEEeCCCCC-CcccChhhHhccCcE
Q 018158 227 LLGADEFILSTN--A---MQMQAG-KRTLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPEA-PFELPSFPLIFGKRS 298 (360)
Q Consensus 227 ~~g~~~~v~~~~--~---~~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~ 298 (360)
+|+++++++.+ . +..... ..++|++||++|....+..++++++++ |+++.+|.... ...++...++.++ +
T Consensus 236 -lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~-~ 313 (374)
T 1cdo_A 236 -FGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGR-T 313 (374)
T ss_dssp -TTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTC-E
T ss_pred -hCCceEEeccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHhcCC-e
Confidence 99999998774 1 122222 348999999999876789999999999 99999998764 4556666777777 9
Q ss_pred EEEeecC---CHHHHHHHHHHHhcCCCc--cce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 299 VKGSMTG---GMRETQEMMNVCGKYNIT--CNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 299 i~~~~~~---~~~~~~~~~~~l~~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+.++... ..++++++++++.+++++ +.+ ++|+|+++++|++.+++++. +|+|+++
T Consensus 314 i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~ 374 (374)
T 1cdo_A 314 WKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVLSL 374 (374)
T ss_dssp EEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred EEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-eEEEEeC
Confidence 9988653 356799999999999986 455 89999999999999998875 6999875
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-55 Score=409.01 Aligned_cols=332 Identities=24% Similarity=0.313 Sum_probs=286.5
Q ss_pred CCCcccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCC
Q 018158 5 TPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSN 83 (360)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~ 83 (360)
+|++ |+|.++..+ +++.++++++|.|+|++|||||||++++||++|+++++|.++ ...+|.++|||++|+|+++|++
T Consensus 24 m~~~-mkA~~~~~~-~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~vG~~ 101 (363)
T 3uog_A 24 MSKW-MQEWSTETV-APHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKS 101 (363)
T ss_dssp CCSE-EEEEEBSCT-TTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEEECTT
T ss_pred Cchh-hEEEEEccC-CCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEEECCC
Confidence 3555 777766555 558999999999999999999999999999999999999775 3578999999999999999999
Q ss_pred CCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccc
Q 018158 84 VKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPL 163 (360)
Q Consensus 84 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l 163 (360)
|++|++||||++.+. ..|..|. +.|.+..... ...|...+|+|+||+.+|+++++++|+++++++||++
T Consensus 102 v~~~~vGDrV~~~~~-------~~c~~g~-~~c~~~~~~~---~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l 170 (363)
T 3uog_A 102 VTRFRPGDRVISTFA-------PGWLDGL-RPGTGRTPAY---ETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTL 170 (363)
T ss_dssp CCSCCTTCEEEECSS-------TTCCSSS-CCSCSSCCCC---CCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTT
T ss_pred CCCCCCCCEEEEecc-------ccccccc-cccccccccc---cccCcCCCCcceeEEEechHHeEECCCCCCHHHHhhc
Confidence 999999999987543 3678888 8997521110 0022356799999999999999999999999999999
Q ss_pred cchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH---
Q 018158 164 LCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM--- 240 (360)
Q Consensus 164 ~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~--- 240 (360)
++++.|||+++.....++ +|++|||+|+|++|++++|+|+.+|++|+++++++++++.+++ +|+++++|....+
T Consensus 171 ~~~~~ta~~al~~~~~~~--~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~vi~~~~~~~~~ 247 (363)
T 3uog_A 171 PCAGLTAWFALVEKGHLR--AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFA-LGADHGINRLEEDWVE 247 (363)
T ss_dssp TTHHHHHHHHHTTTTCCC--TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HTCSEEEETTTSCHHH
T ss_pred ccHHHHHHHHHHHhcCCC--CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHH-cCCCEEEcCCcccHHH
Confidence 999999999997666655 9999999999999999999999999999999999999999988 9999999844322
Q ss_pred HHHhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-cccChhhHhccCcEEEEeecCCHHHHHHHHHHH
Q 018158 241 QMQAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-FELPSFPLIFGKRSVKGSMTGGMRETQEMMNVC 317 (360)
Q Consensus 241 ~~~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l 317 (360)
..... ++++|++|||+|. ..+..++++++++|+++.+|...+. ..++...++.+++++.++.....++++++++++
T Consensus 248 ~v~~~~~g~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~ 326 (363)
T 3uog_A 248 RVYALTGDRGADHILEIAGG-AGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALEDLVGAV 326 (363)
T ss_dssp HHHHHHTTCCEEEEEEETTS-SCHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEECCCCCHHHHHHHHHHH
T ss_pred HHHHHhCCCCceEEEECCCh-HHHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEEEecCCHHHHHHHHHHH
Confidence 22222 5689999999995 4689999999999999999987653 566777788999999999998889999999999
Q ss_pred hcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 318 GKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 318 ~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
.++++++.+ ++|+|+++++|++.+.+++ .||+|+++
T Consensus 327 ~~g~l~~~i~~~~~l~~~~~A~~~~~~~~-~gKvvi~~ 363 (363)
T 3uog_A 327 DRLGLKPVIDMRYKFTEVPEALAHLDRGP-FGKVVIEF 363 (363)
T ss_dssp HHHTCCCCEEEEEEGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred HcCCCccceeeEEcHHHHHHHHHHHHcCC-CccEEEeC
Confidence 999999888 8999999999999999999 89999985
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-55 Score=406.41 Aligned_cols=328 Identities=23% Similarity=0.307 Sum_probs=280.5
Q ss_pred cceeEEeccCCCCCceEEEEeCCC-CCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRE-NGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~-~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|||+++ ..++.++++|+|.|+ ++||||||||++++||++|++.+.|.. ...+|.++|||++|+|+++|++|++|+
T Consensus 1 MkAvv~---~~~g~l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~-~~~~P~i~G~E~~G~V~~vG~~V~~~~ 76 (346)
T 4a2c_A 1 MKSVVN---DTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNG-AHYYPITLGHEFSGYIDAVGSGVDDLH 76 (346)
T ss_dssp CEEEEE---CSSSCEEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSC-SSSSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred CCEEEE---ecCCCEEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCC-CCCCCccccEEEEEEEEEECCCccccc
Confidence 566554 445789999999998 589999999999999999999998876 567899999999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++.+ ...|+.|.+|..|.+++|.+..+ .|...+|+|+||+++|+++++++|+++++++||+++. ..
T Consensus 77 ~GdrV~~~~-~~~~g~c~~c~~g~~~~c~~~~~-------~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~-~~ 147 (346)
T 4a2c_A 77 PGDAVACVP-LLPCFTCPECLKGFYSQCAKYDF-------IGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEP-IT 147 (346)
T ss_dssp TTCEEEECC-EECCSCSHHHHTTCGGGCSSCEE-------BTTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHHH-HH
T ss_pred CCCeEEeee-ccCCCCcccccCCccccCCCccc-------ccCCCCcccccccccchheEEECCCCCCHHHHHhchH-HH
Confidence 999998755 45899999999999999998543 2336789999999999999999999999999997763 45
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---H-
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAMQM---Q- 243 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~- 243 (360)
++++++.... +++|++|+|+|+|++|++++|+|+.+|++ +++++++++|++.+++ +|+++++|+++.+.. .
T Consensus 148 ~~~~~~~~~~---~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~-lGa~~~i~~~~~~~~~~~~~ 223 (346)
T 4a2c_A 148 VGLHAFHLAQ---GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS-FGAMQTFNSSEMSAPQMQSV 223 (346)
T ss_dssp HHHHHHHHTT---CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-TTCSEEEETTTSCHHHHHHH
T ss_pred HHHHHHHHhc---cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH-cCCeEEEeCCCCCHHHHHHh
Confidence 5566665544 55999999999999999999999999996 6788889999999999 999999998875322 1
Q ss_pred -hcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCccc---ChhhHhccCcEEEEeecC-----CHHHHHHHH
Q 018158 244 -AGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFEL---PSFPLIFGKRSVKGSMTG-----GMRETQEMM 314 (360)
Q Consensus 244 -~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~---~~~~~~~~~~~i~~~~~~-----~~~~~~~~~ 314 (360)
+.++++|+++|++|....+..++++++++|+++.+|.......+ +...++.+++++.|+... ..+++++++
T Consensus 224 ~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~ 303 (346)
T 4a2c_A 224 LRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETAS 303 (346)
T ss_dssp HGGGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHH
T ss_pred hcccCCcccccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCcchHHHHHHHH
Confidence 22678999999999888889999999999999999987765433 344578899999998653 246799999
Q ss_pred HHHhcCCCc--cce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 315 NVCGKYNIT--CNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 315 ~~l~~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+++.+|+++ +.+ ++|+|+++++|++.+++++..||+||.+
T Consensus 304 ~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P 346 (346)
T 4a2c_A 304 RLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP 346 (346)
T ss_dssp HHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred HHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence 999999884 456 8999999999999999999999999864
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-56 Score=409.85 Aligned_cols=329 Identities=19% Similarity=0.252 Sum_probs=282.4
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC---CCCCCCccccccceEEEEecCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG---ITMYPVVPGHEITGIITKVGSNVKN 86 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~ 86 (360)
|++.++...++ .++++++|.|+|++|||+|||++++||++|++++.|.++ ...+|.++|||++|+|+++|++|++
T Consensus 1 Mka~~~~~~g~--~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~ 78 (343)
T 2dq4_A 1 MRALAKLAPEE--GLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRR 78 (343)
T ss_dssp CEEEEECSSSS--SCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCS
T ss_pred CeEEEEeCCCC--cEEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCc
Confidence 45555543332 399999999999999999999999999999999998654 2467899999999999999999999
Q ss_pred CCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccch
Q 018158 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCA 166 (360)
Q Consensus 87 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~ 166 (360)
|++||||++.+. .+|+.|.+|+.|++++|.+... .| ...+|+|+||+.+++++++++|+++++++|+++ ..
T Consensus 79 ~~vGdrV~~~~~-~~cg~C~~C~~g~~~~C~~~~~--~g-----~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~ 149 (343)
T 2dq4_A 79 PQVGDHVSLESH-IVCHACPACRTGNYHVCLNTQI--LG-----VDRDGGFAEYVVVPAENAWVNPKDLPFEVAAIL-EP 149 (343)
T ss_dssp SCTTCEEEECCE-ECCSCSHHHHTTCGGGCTTCEE--BT-----TTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTH-HH
T ss_pred CCCCCEEEECCC-CCCCCChhhhCcCcccCCCcce--ec-----CCCCCcceeEEEEchHHeEECCCCCCHHHHHhh-hH
Confidence 999999988654 4799999999999999997532 12 245799999999999999999999999999887 46
Q ss_pred hhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---H
Q 018158 167 GITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQ---M 242 (360)
Q Consensus 167 ~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~ 242 (360)
+.|||+++....+ + +|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+++ + +++++++.+.+. .
T Consensus 150 ~~ta~~~l~~~~~--~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l-a~~v~~~~~~~~~~~~ 224 (343)
T 2dq4_A 150 FGNAVHTVYAGSG--V-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y-ADRLVNPLEEDLLEVV 224 (343)
T ss_dssp HHHHHHHHHSTTC--C-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T-CSEEECTTTSCHHHHH
T ss_pred HHHHHHHHHHhCC--C-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-HHhccCcCccCHHHHH
Confidence 6799999973332 6 99999999999999999999999999 89999999999999988 8 999998875422 2
Q ss_pred Hhc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccCh-hhHhccCcEEEEeecC-CHHHHHHHHHHHhc
Q 018158 243 QAG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPS-FPLIFGKRSVKGSMTG-GMRETQEMMNVCGK 319 (360)
Q Consensus 243 ~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~-~~~~~~~~~~~l~~ 319 (360)
.+. +.++|++||++|....+..++++++++|+++.+|.......++. ..++.+++++.++... ..++++++++++++
T Consensus 225 ~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~ 304 (343)
T 2dq4_A 225 RRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYS 304 (343)
T ss_dssp HHHHSSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCEEECHHHHTGGGTCEEEECCSCCTTHHHHHHHHHHHH
T ss_pred HHhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCceeCcHHHHHhCceEEEEeecCCCHHHHHHHHHHHHc
Confidence 211 66899999999986678999999999999999998766666777 7788899999998766 67889999999999
Q ss_pred CCC--ccce-EEECCccHHHHHHHHHcCCCceeEEEecC
Q 018158 320 YNI--TCNI-EVIKPDQINEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 320 ~~l--~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
|++ ++.+ ++|+++++++|++.+.+++. ||+|++++
T Consensus 305 g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvv~~~~ 342 (343)
T 2dq4_A 305 GRVDLSPLLTHRLPLSRYREAFGLLASGQA-VKVILDPK 342 (343)
T ss_dssp TSSCCGGGEEEEEEGGGHHHHHHHHHHSSC-SEEEEETT
T ss_pred CCCChHHheeEEecHHHHHHHHHHHhcCCc-eEEEEeeC
Confidence 995 5666 89999999999999998887 99999875
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-55 Score=404.31 Aligned_cols=330 Identities=21% Similarity=0.321 Sum_probs=281.4
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhcc-CCC--CCCCCCccccccceEEEEecCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKN-DWG--ITMYPVVPGHEITGIITKVGSNVKN 86 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g-~~~--~~~~p~~~G~e~~G~V~~vG~~v~~ 86 (360)
|++.++.. ++.++++++|.|+|+++||||||++++||++|++.+.+ .++ ...+|.++|||++|+|+++|++|++
T Consensus 5 mka~~~~~---~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~ 81 (352)
T 1e3j_A 5 NLSAVLYK---QNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKH 81 (352)
T ss_dssp CEEEEEEE---TTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCS
T ss_pred CEEEEEEc---CCcEEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCCC
Confidence 67666543 46799999999999999999999999999999998874 332 2357899999999999999999999
Q ss_pred CCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccch
Q 018158 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCA 166 (360)
Q Consensus 87 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~ 166 (360)
|++||||++.+. .+|+.|.+|+.|.++.|.+..+ .|.. ..+|+|+||+.+|+++++++|+++++++|+++ ..
T Consensus 82 ~~vGdrV~~~~~-~~cg~C~~C~~g~~~~C~~~~~--~g~~----~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~ 153 (352)
T 1e3j_A 82 LKKGDRVAVEPG-VPCRRCQFCKEGKYNLCPDLTF--CATP----PDDGNLARYYVHAADFCHKLPDNVSLEEGALL-EP 153 (352)
T ss_dssp CCTTCEEEECCE-ECCSSSHHHHTTCGGGCTTCEE--TTBT----TBCCSCBSEEEEEGGGEEECCTTSCHHHHHTH-HH
T ss_pred CCCCCEEEEcCc-CCCCCChhhhCcCcccCCCCcc--cCcC----CCCccceeEEEeChHHeEECcCCCCHHHHHhh-ch
Confidence 999999988654 5799999999999999997532 2221 34699999999999999999999999998865 57
Q ss_pred hhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCcc-HH---HH
Q 018158 167 GITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN-AM---QM 242 (360)
Q Consensus 167 ~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~-~~---~~ 242 (360)
+.|||++++... +++|++|||+|+|++|++++|+|+.+|++|+++++++++++.+++ +|+++++++.+ .+ ..
T Consensus 154 ~~ta~~al~~~~---~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~~~~~~~~~~~~~~i 229 (352)
T 1e3j_A 154 LSVGVHACRRAG---VQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-CGADVTLVVDPAKEEESSI 229 (352)
T ss_dssp HHHHHHHHHHHT---CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTCSEEEECCTTTSCHHHH
T ss_pred HHHHHHHHHhcC---CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-hCCCEEEcCcccccHHHHH
Confidence 789999996543 559999999999999999999999999999999999999999998 99999998774 22 22
Q ss_pred Hhc-----CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHHHHHHH
Q 018158 243 QAG-----KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVC 317 (360)
Q Consensus 243 ~~~-----~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l 317 (360)
... +.++|++||++|....+..++++++++|+++.+|.......++...++.+++++.++... .++++++++++
T Consensus 230 ~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~-~~~~~~~~~l~ 308 (352)
T 1e3j_A 230 IERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRY-CNDYPIALEMV 308 (352)
T ss_dssp HHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSC-SSCHHHHHHHH
T ss_pred HHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccccHHHHHhcCcEEEEeccc-hHHHHHHHHHH
Confidence 221 368999999999876789999999999999999986555667777888999999998765 46799999999
Q ss_pred hcCCCc--cce-EEECCccHHHHHHHHHcCC-CceeEEEecC
Q 018158 318 GKYNIT--CNI-EVIKPDQINEALDRLARND-VRYRFVIDIA 355 (360)
Q Consensus 318 ~~~~l~--~~i-~~~~~~~~~~a~~~~~~~~-~~gkvvi~~~ 355 (360)
.+++++ +.+ ++|+++++++|++.+.+++ ..||+|+++.
T Consensus 309 ~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~ 350 (352)
T 1e3j_A 309 ASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCR 350 (352)
T ss_dssp HTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECC
T ss_pred HcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecC
Confidence 999864 556 8999999999999999987 6899999875
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-55 Score=409.31 Aligned_cols=334 Identities=23% Similarity=0.331 Sum_probs=285.1
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCC----
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVK---- 85 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~---- 85 (360)
|++.++ .++...++++++|.|+|+++||||||++++||++|++++.|.++...+|.++|||++|+|+++| +|+
T Consensus 18 mka~~~--~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~P~v~GhE~~G~V~~vG-~V~~~~~ 94 (380)
T 1vj0_A 18 AHAMVL--EKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVN-GEKRDLN 94 (380)
T ss_dssp EEEEEB--CSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEES-SCCBCTT
T ss_pred eEEEEE--ecCCCCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCCCCCCCcccCcCcEEEEEEeC-Ccccccc
Confidence 554444 3332489999999999999999999999999999999999976545689999999999999999 999
Q ss_pred --CCCCCCEEEeccCccCCCCChhhh-CCCCCCccccccccccccc---CCCccccceeeEEEe-ecceeEECCCCCCcc
Q 018158 86 --NFKVGDRAAVGCLAAACMECEFCK-DSQENYCDKIQFTYNGIFW---DGSITYGGYSEMLVA-DYRFVVHVPENIAMD 158 (360)
Q Consensus 86 --~~~~Gd~V~~~~~~~~~~~~~~~~-~~~~~~c~~~~~~~~g~~~---~~~~~~g~~~~~~~v-~~~~~~~iP~~~~~~ 158 (360)
+|++||||++.+. .+|+.|.+|. .|.+++|.+..+ .|... ......|+|+||+++ |+++++++|++++++
T Consensus 95 ~~~~~vGdrV~~~~~-~~cg~C~~C~~~g~~~~C~~~~~--~g~~~~~~~~~~~~G~~aey~~v~~~~~~~~iP~~l~~~ 171 (380)
T 1vj0_A 95 GELLKPGDLIVWNRG-ITCGECYWCKVSKEPYLCPNRKV--YGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDLD 171 (380)
T ss_dssp SCBCCTTCEEEECSE-ECCSSSHHHHTSCCGGGCTTCEE--TTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTSCHH
T ss_pred CCCCCCCCEEEEccc-CCCCCCHHHhcCCCcccCCCcce--eccccccCCCCCCCccccceEEEcccceEEECCCCCChH
Confidence 9999999988765 4799999999 999999987532 12100 001346999999999 999999999999999
Q ss_pred -ccccccchhhhhhchhhccCC-CCCCCCcEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcCCCeEee
Q 018158 159 -AAAPLLCAGITVFCPMKDNNL-IDSPAKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFIL 235 (360)
Q Consensus 159 -~aa~l~~~~~ta~~~l~~~~~-~~~~~~~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~~v~ 235 (360)
+|+.++ ++.|||+++... . ++ +|++|||+|+|++|++++|+|+.+| ++|+++++++++++.+++ +|++++++
T Consensus 172 ~~Aa~~~-~~~ta~~al~~~-~~~~--~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~-lGa~~vi~ 246 (380)
T 1vj0_A 172 VLAMAMC-SGATAYHAFDEY-PESF--AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE-IGADLTLN 246 (380)
T ss_dssp HHHHHTT-HHHHHHHHHHTC-SSCC--BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH-TTCSEEEE
T ss_pred HhHhhhc-HHHHHHHHHHhc-CCCC--CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH-cCCcEEEe
Confidence 666555 999999999653 4 55 9999999999999999999999999 599999999999999998 99999999
Q ss_pred Cc---cHHH---HHhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC-C-CcccChhh-HhccCcEEEEeec
Q 018158 236 ST---NAMQ---MQAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE-A-PFELPSFP-LIFGKRSVKGSMT 304 (360)
Q Consensus 236 ~~---~~~~---~~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~-~~~~~~~~-~~~~~~~i~~~~~ 304 (360)
+. +.+. +... +.++|++||++|....+..++++++++|+++.+|... + ...++... ++.+++++.++..
T Consensus 247 ~~~~~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~ 326 (380)
T 1vj0_A 247 RRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWV 326 (380)
T ss_dssp TTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCC
T ss_pred ccccCcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchHHHHHhCCeEEEEeec
Confidence 87 4322 2222 4589999999998767899999999999999999876 4 56677777 8889999999988
Q ss_pred CCHHHHHHHHHHHhc--CCCccce-EEECCccHHHHHHHHHcCCCceeEEEecC
Q 018158 305 GGMRETQEMMNVCGK--YNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 305 ~~~~~~~~~~~~l~~--~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
...++++++++++++ |++++.+ ++|+|+++++|++.+++++.. |+|++++
T Consensus 327 ~~~~~~~~~~~l~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~-Kvvl~~~ 379 (380)
T 1vj0_A 327 SDTSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREAL-KVILYPE 379 (380)
T ss_dssp CCHHHHHHHHHHHHTCHHHHGGGCCEEEEGGGHHHHHHHHHHTSCS-CEEEECC
T ss_pred CCHHHHHHHHHHHHhhcCCeeeEEEEEEeHHHHHHHHHHHhcCCCc-eEEEEeC
Confidence 888899999999999 9998777 899999999999999998888 9999875
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-55 Score=405.07 Aligned_cols=329 Identities=24% Similarity=0.371 Sum_probs=286.8
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC--------CCCCCCccccccceEEEEec
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG--------ITMYPVVPGHEITGIITKVG 81 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~--------~~~~p~~~G~e~~G~V~~vG 81 (360)
|++.++.. ..++++++++|.|+|+++||||||++++||++|+++++|.++ ...+|.++|||++|+|+++|
T Consensus 1 Mka~~~~~--~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 78 (347)
T 1jvb_A 1 MRAVRLVE--IGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVG 78 (347)
T ss_dssp CEEEEECS--TTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEEC
T ss_pred CeEEEEec--CCCCeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEEC
Confidence 45555533 334699999999999999999999999999999999988654 24679999999999999999
Q ss_pred CCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeec-ceeEECCCCCCcccc
Q 018158 82 SNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADY-RFVVHVPENIAMDAA 160 (360)
Q Consensus 82 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~-~~~~~iP~~~~~~~a 160 (360)
++|++|++||||++. ...+|+.|.+|+.|++++|.+... .| ...+|+|+||+.+|+ ++++++ +++++++|
T Consensus 79 ~~v~~~~vGdrV~~~-~~~~Cg~C~~C~~g~~~~C~~~~~--~G-----~~~~G~~aey~~v~~~~~~~~i-~~~~~~~a 149 (347)
T 1jvb_A 79 DEVVGYSKGDLVAVN-PWQGEGNCYYCRIGEEHLCDSPRW--LG-----INFDGAYAEYVIVPHYKYMYKL-RRLNAVEA 149 (347)
T ss_dssp TTCCSCCTTCEEEEC-CEECCSSSHHHHTTCGGGCSSCEE--BT-----TTBCCSSBSEEEESCGGGEEEC-SSSCHHHH
T ss_pred CCCCCCCCCCEEEeC-CCCCCCCChhhhCcCcccCccccc--cc-----ccCCCcceeEEEecCccceEEe-CCCCHHHc
Confidence 999999999999654 456899999999999999987532 22 246799999999999 999999 99999999
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHcCCCeEeeCcc
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKELLGADEFILSTN 238 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~ 238 (360)
+++++++.|||+++.+. . +++|+++||+|+ |++|++++|+++.. |++|+++++++++++.+++ +|+++++++.+
T Consensus 150 a~l~~~~~ta~~~l~~~-~--~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~-~g~~~~~~~~~ 225 (347)
T 1jvb_A 150 APLTCSGITTYRAVRKA-S--LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-AGADYVINASM 225 (347)
T ss_dssp GGGGTHHHHHHHHHHHT-T--CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-HTCSEEEETTT
T ss_pred ccchhhHHHHHHHHHhc-C--CCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-hCCCEEecCCC
Confidence 99999999999999864 3 559999999999 69999999999999 9999999999999999988 99999988776
Q ss_pred HHH---HHhc-C-CCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC-CCcccChhhHhccCcEEEEeecCCHHHHHH
Q 018158 239 AMQ---MQAG-K-RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE-APFELPSFPLIFGKRSVKGSMTGGMRETQE 312 (360)
Q Consensus 239 ~~~---~~~~-~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 312 (360)
.+. .... . .++|++||++|....+..++++++++|+++.+|... .. .++...++.+++++.++.....+++++
T Consensus 226 ~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~ 304 (347)
T 1jvb_A 226 QDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL-HYHAPLITLSEIQFVGSLVGNQSDFLG 304 (347)
T ss_dssp SCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC-CCCHHHHHHHTCEEEECCSCCHHHHHH
T ss_pred ccHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-CCCHHHHHhCceEEEEEeccCHHHHHH
Confidence 433 2222 2 589999999998767889999999999999999876 45 667777888999999998888889999
Q ss_pred HHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 313 MMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 313 ~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+++++.++++++.+ ++|+|+++++|++.+++++..||+|+++
T Consensus 305 ~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 347 (347)
T 1jvb_A 305 IMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347 (347)
T ss_dssp HHHHHHTTSSCCCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred HHHHHHcCCCCceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence 99999999999887 8999999999999999998889999974
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-55 Score=403.59 Aligned_cols=333 Identities=17% Similarity=0.232 Sum_probs=280.3
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhh-hhccCCCCCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIH-HVKNDWGITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~-~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|||.++. +++.++++++|.|+|+++||+|||++++||++|++ +..|.+ ...+|.++|||++|+|+++|++|++|+
T Consensus 1 MkA~~~~---~~~~~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~-~~~~p~v~G~E~~G~V~~vG~~v~~~~ 76 (352)
T 3fpc_A 1 MKGFAML---SIGKVGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAI-GERHNMILGHEAVGEVVEVGSEVKDFK 76 (352)
T ss_dssp CEEEEEE---ETTEEEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTT-CCCSSEECCCEEEEEEEEECTTCCSCC
T ss_pred CeEEEEc---cCCCceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCC-CCCCCcccCCcceEEEEEECCCCCcCC
Confidence 4555553 33568999999999999999999999999999999 557776 456799999999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecc--eeEECCCCCCccccccccch
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYR--FVVHVPENIAMDAAAPLLCA 166 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~aa~l~~~ 166 (360)
+||||++.+. .+|+.|.+|..|+++.|...... +..+...+|+|+||+.++++ +++++|+++++++|+++++.
T Consensus 77 vGdrV~~~~~-~~c~~c~~c~~g~~~~~~~~~~~----~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~ 151 (352)
T 3fpc_A 77 PGDRVVVPAI-TPDWRTSEVQRGYHQHSGGMLAG----WKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDM 151 (352)
T ss_dssp TTCEEEECSB-CCCSSSHHHHTTCGGGTTSTTTT----BCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTH
T ss_pred CCCEEEEccc-cCCCCchhhcCCCcCCccccccc----cccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccch
Confidence 9999987554 48999999999999999764221 11233578999999999976 89999999999999999999
Q ss_pred hhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHH--
Q 018158 167 GITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQ-- 243 (360)
Q Consensus 167 ~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~-- 243 (360)
+.|||++++... +++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+++ +|+++++++++.+...
T Consensus 152 ~~ta~~al~~~~---~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~-lGa~~vi~~~~~~~~~~v 227 (352)
T 3fpc_A 152 MTTGFHGAELAN---IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE-YGATDIINYKNGDIVEQI 227 (352)
T ss_dssp HHHHHHHHHHTT---CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH-HTCCEEECGGGSCHHHHH
T ss_pred hHHHHHHHHhcC---CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hCCceEEcCCCcCHHHHH
Confidence 999999996544 5599999999999999999999999999 79999999999999999 9999999987653322
Q ss_pred -hc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccC--hh--hHhccCcEEEEeecC-CHHHHHHHHH
Q 018158 244 -AG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELP--SF--PLIFGKRSVKGSMTG-GMRETQEMMN 315 (360)
Q Consensus 244 -~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~--~~--~~~~~~~~i~~~~~~-~~~~~~~~~~ 315 (360)
+. ++++|++||++|....+..++++++++|+++.+|.......++ .. .+..+++++.++... ..++++++++
T Consensus 228 ~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 307 (352)
T 3fpc_A 228 LKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMERLID 307 (352)
T ss_dssp HHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCHHHHHHHHHH
T ss_pred HHHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccCchhHHHHHHH
Confidence 22 5689999999999777899999999999999999875433222 22 234578899988764 3678999999
Q ss_pred HHhcCCCccc--e-EEEC-CccHHHHHHHHHcCCCc-eeEEEecC
Q 018158 316 VCGKYNITCN--I-EVIK-PDQINEALDRLARNDVR-YRFVIDIA 355 (360)
Q Consensus 316 ~l~~~~l~~~--i-~~~~-~~~~~~a~~~~~~~~~~-gkvvi~~~ 355 (360)
++++|++++. + ++|+ |+++++|++.+.+++.. +|+|++++
T Consensus 308 l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~ 352 (352)
T 3fpc_A 308 LVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA 352 (352)
T ss_dssp HHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred HHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence 9999999763 5 8999 99999999999987654 89999874
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-55 Score=409.68 Aligned_cols=321 Identities=21% Similarity=0.319 Sum_probs=277.8
Q ss_pred CceEEEEeCCC-CCCCeEEEEEeeeecccchhhhhccCCC-------CCCCCCccccccceEEEEecCCC------CCCC
Q 018158 23 KITPYIFKRRE-NGVNDVTIKILYCGICHTDIHHVKNDWG-------ITMYPVVPGHEITGIITKVGSNV------KNFK 88 (360)
Q Consensus 23 ~l~~~~~~~p~-~~~~evlVkv~~~~i~~~D~~~~~g~~~-------~~~~p~~~G~e~~G~V~~vG~~v------~~~~ 88 (360)
.++++++|.|+ |+++||||||.+++||++|++++.|... ...+|.++|||++|+|+++|++| ++|+
T Consensus 41 ~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~~ 120 (404)
T 3ip1_A 41 EVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFE 120 (404)
T ss_dssp EEEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEECTTCEETTTTEECC
T ss_pred ceEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEECCCccccccCCCCC
Confidence 79999999999 9999999999999999999999886421 24678999999999999999999 8999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCC------cccccc
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIA------MDAAAP 162 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~------~~~aa~ 162 (360)
+||||++.+. ..|+.|.+|+.|++++|++... .|...+|+|+||+.++++.++++|++++ +.++++
T Consensus 121 vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~-------~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~~~~~aa~ 192 (404)
T 3ip1_A 121 IGEPVCAEEM-LWCGHCRPCAEGFPNHCENLNE-------LGFNVDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGS 192 (404)
T ss_dssp TTCEEEECSE-ECCSCSHHHHTTCGGGCTTCEE-------BTTTBCCSSBSEEEEEGGGEEECGGGBTTBCTHHHHHHHH
T ss_pred CCCEEEECCc-cCCCCCHHHHCcCcccCccccc-------cCCCCCCCCcceEEechHHeEeccccccccccccchhHHh
Confidence 9999988766 5799999999999999998532 2335679999999999999999999886 345889
Q ss_pred ccchhhhhhchhhccC-CCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHH
Q 018158 163 LLCAGITVFCPMKDNN-LIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAM 240 (360)
Q Consensus 163 l~~~~~ta~~~l~~~~-~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 240 (360)
++.++.|||+++.... .+ ++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+++ +|+++++++.+.+
T Consensus 193 l~~~~~ta~~al~~~~~~~--~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~-lGa~~vi~~~~~~ 269 (404)
T 3ip1_A 193 LVEPTSVAYNAVIVRGGGI--RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKE-LGADHVIDPTKEN 269 (404)
T ss_dssp THHHHHHHHHHHTTTSCCC--CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH-HTCSEEECTTTSC
T ss_pred hhhHHHHHHHHHHHhccCC--CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-cCCCEEEcCCCCC
Confidence 9999999999996432 44 499999999999999999999999999 89999999999999998 9999999987653
Q ss_pred HH---Hhc--CCCcCEEEEcCCCc-ccHHHHHHHh----ccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCC-HHH
Q 018158 241 QM---QAG--KRTLDFILDTVSAK-HSLGPILELL----KVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGG-MRE 309 (360)
Q Consensus 241 ~~---~~~--~~~~d~vid~~g~~-~~~~~~~~~l----~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~ 309 (360)
.. .+. ++++|++|||+|.. ..+..+.+++ +++|+++.+|.......++...++.+++++.++.... .++
T Consensus 270 ~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 349 (404)
T 3ip1_A 270 FVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGSQGHSGHGT 349 (404)
T ss_dssp HHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCSCEEECHHHHHHTTCEEEECCCCCSTTH
T ss_pred HHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCCCCcccHHHHhccceEEEEecCCCchHH
Confidence 22 222 56899999999987 3567777888 9999999999988777888888999999999988644 678
Q ss_pred HHHHHHHHhcCCCc--cce-EEECCccHHHHHHHHHcCCCceeEEEecCCCcC
Q 018158 310 TQEMMNVCGKYNIT--CNI-EVIKPDQINEALDRLARNDVRYRFVIDIAGGAR 359 (360)
Q Consensus 310 ~~~~~~~l~~~~l~--~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~~~ 359 (360)
++++++++++| ++ +.+ ++|+|+++++|++.+. .||+|++++++++
T Consensus 350 ~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~----~GKvvl~~~~~~~ 397 (404)
T 3ip1_A 350 FPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQ----TDKSLVKVTMLNE 397 (404)
T ss_dssp HHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTT----TCTTCSCEEEECC
T ss_pred HHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHh----CCcEEEecCCCCC
Confidence 99999999999 65 455 8999999999999987 5899998876654
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-54 Score=395.06 Aligned_cols=313 Identities=19% Similarity=0.223 Sum_probs=272.8
Q ss_pred CCCCCCCcccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEe
Q 018158 1 MAQTTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKV 80 (360)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~v 80 (360)
||+++|++ ||+.++..++++..+++++.|.|+|++|||||||++++||++|++++.|.++ ..+|.++|||++|+|+++
T Consensus 1 M~~~~p~~-mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~P~i~G~e~~G~V~~v 78 (334)
T 3qwb_A 1 MKCTIPEQ-QKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP-CEKPYVLGREASGTVVAK 78 (334)
T ss_dssp ----CCSE-EEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSC-CCSSEECCSEEEEEEEEE
T ss_pred CCCCCchh-eEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC-CCCCCccccceEEEEEEE
Confidence 88889998 8888877666667799999999999999999999999999999999999874 567999999999999999
Q ss_pred cCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEee-cceeEECCCCCCccc
Q 018158 81 GSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVAD-YRFVVHVPENIAMDA 159 (360)
Q Consensus 81 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~-~~~~~~iP~~~~~~~ 159 (360)
|++|++|++||||++ ..+|+|+||+.++ ++.++++|+++++++
T Consensus 79 G~~v~~~~~GdrV~~------------------------------------~~~G~~aey~~v~~~~~~~~~P~~~~~~~ 122 (334)
T 3qwb_A 79 GKGVTNFEVGDQVAY------------------------------------ISNSTFAQYSKISSQGPVMKLPKGTSDEE 122 (334)
T ss_dssp CTTCCSCCTTCEEEE------------------------------------ECSSCSBSEEEEETTSSEEECCTTCCHHH
T ss_pred CCCCCCCCCCCEEEE------------------------------------eeCCcceEEEEecCcceEEECCCCCCHHH
Confidence 999999999999986 3469999999999 999999999999999
Q ss_pred ---cccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEee
Q 018158 160 ---AAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFIL 235 (360)
Q Consensus 160 ---aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~ 235 (360)
++++++.+.|||+++....+++ +|++|||+|+ |++|++++|+|+..|++|+++++++++++.+++ +|++++++
T Consensus 123 ~~~aa~~~~~~~ta~~~l~~~~~~~--~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~ga~~~~~ 199 (334)
T 3qwb_A 123 LKLYAAGLLQVLTALSFTNEAYHVK--KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE-YGAEYLIN 199 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCCC--TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCSEEEE
T ss_pred hhhhhhhhhHHHHHHHHHHHhccCC--CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCcEEEe
Confidence 8889999999999998776655 9999999996 999999999999999999999999999999988 99999999
Q ss_pred CccHHHHHh---c--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCc-ccChhhHhccCcEEEEeecC----
Q 018158 236 STNAMQMQA---G--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPF-ELPSFPLIFGKRSVKGSMTG---- 305 (360)
Q Consensus 236 ~~~~~~~~~---~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~---- 305 (360)
+.+.+.... . +.++|++|||+|.. .+..++++++++|+++.+|...+.. .++...+..+++++.++...
T Consensus 200 ~~~~~~~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (334)
T 3qwb_A 200 ASKEDILRQVLKFTNGKGVDASFDSVGKD-TFEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIA 278 (334)
T ss_dssp TTTSCHHHHHHHHTTTSCEEEEEECCGGG-GHHHHHHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGGGGSC
T ss_pred CCCchHHHHHHHHhCCCCceEEEECCChH-HHHHHHHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEeccccC
Confidence 876533222 2 56899999999984 6899999999999999999876543 56777788899999875432
Q ss_pred CHHH----HHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEecC
Q 018158 306 GMRE----TQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 306 ~~~~----~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
..++ ++++++++.+|++++.+ ++|+++++++|++.+.+++..||+|+++.
T Consensus 279 ~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~ 333 (334)
T 3qwb_A 279 DPEEWKYYSDEFFGLVNSKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLVLEIP 333 (334)
T ss_dssp SHHHHHHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCCBEEEEECC
T ss_pred CHHHHHHHHHHHHHHHHCCCccCceeeEEcHHHHHHHHHHHHhCCCceEEEEecC
Confidence 3333 46888999999999887 89999999999999999999999999985
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-54 Score=407.50 Aligned_cols=336 Identities=20% Similarity=0.248 Sum_probs=282.1
Q ss_pred cceeEEeccCCCCCceEEEEeCCCC-CC-----CeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRREN-GV-----NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSN 83 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~-~~-----~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~ 83 (360)
|+|.++. + ++.++++++|.|+| ++ +||||||++++||++|+++++|.+ ...+|.++|||++|+|+++|++
T Consensus 3 MkA~~~~--~-~~~l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~-~~~~p~v~GhE~~G~V~~vG~~ 78 (398)
T 2dph_A 3 NKSVVYH--G-TRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRF-IVPKGHVLGHEITGEVVEKGSD 78 (398)
T ss_dssp EEEEEEE--E-TTEEEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSS-CCCTTCBCCCCEEEEEEEECTT
T ss_pred cEEEEEE--c-CCCEEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCC-CCCCCcccCCceEEEEEEECCC
Confidence 6766654 2 36899999999998 78 999999999999999999999875 4567899999999999999999
Q ss_pred CCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccc------cccccccCCCccccceeeEEEeecc--eeEECCCCC
Q 018158 84 VKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQF------TYNGIFWDGSITYGGYSEMLVADYR--FVVHVPENI 155 (360)
Q Consensus 84 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~------~~~g~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~ 155 (360)
|++|++||||++.+ ...|+.|.+|++|.+++|.+... ...|.. .....|+|+||++++++ +++++|+++
T Consensus 79 v~~~~vGDrV~~~~-~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~--~~~~~G~~aey~~v~~~~~~~~~iP~~~ 155 (398)
T 2dph_A 79 VELMDIGDLVSVPF-NVACGRCRNCKEARSDVCENNLVNPDADLGAFGFD--LKGWSGGQAEYVLVPYADYMLLKFGDKE 155 (398)
T ss_dssp CCSCCTTCEEECCS-BCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTT--BSSCCCSSBSEEEESSHHHHCEECSSHH
T ss_pred CCCCCCCCEEEEcC-CCCCCCChhhhCcCcccCCCccccccccccccccc--cCCCCceeeeeEEeccccCeEEECCCCC
Confidence 99999999998765 45899999999999999987211 011210 01246999999999987 899999999
Q ss_pred Cccc----cccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCC
Q 018158 156 AMDA----AAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGA 230 (360)
Q Consensus 156 ~~~~----aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~ 230 (360)
++++ ++++++++.|||++++.. . +++|++|||+|+|++|++++|+||.+|+ +|+++++++++++.+++ +|+
T Consensus 156 ~~~~~~~~aa~l~~~~~ta~~al~~~-~--~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-lGa 231 (398)
T 2dph_A 156 QAMEKIKDLTLISDILPTGFHGCVSA-G--VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD-AGF 231 (398)
T ss_dssp HHHHTHHHHTTTTTHHHHHHHHHHHT-T--CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT-TTC
T ss_pred ChhhhcchhhhhcCHHHHHHHHHHHc-C--CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-cCC
Confidence 9998 899999999999999654 4 5599999999999999999999999999 89999999999999988 999
Q ss_pred CeEeeCccHH----HHHhc--CCCcCEEEEcCCCcc--------------cHHHHHHHhccCCEEEEeCCCC--------
Q 018158 231 DEFILSTNAM----QMQAG--KRTLDFILDTVSAKH--------------SLGPILELLKVNGTLSVVGAPE-------- 282 (360)
Q Consensus 231 ~~~v~~~~~~----~~~~~--~~~~d~vid~~g~~~--------------~~~~~~~~l~~~G~~v~~g~~~-------- 282 (360)
+ ++++.+.+ ..... +.++|++||++|... .+..++++++++|+++.+|...
T Consensus 232 ~-~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~~~~~~ 310 (398)
T 2dph_A 232 E-TIDLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVN 310 (398)
T ss_dssp E-EEETTSSSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSCCSSCSS
T ss_pred c-EEcCCCcchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecccccccccccc
Confidence 5 88876532 22222 458999999999753 5789999999999999999762
Q ss_pred -----CCcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCc--c--ce-EEECCccHHHHHHHHHcCCCceeEEE
Q 018158 283 -----APFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNIT--C--NI-EVIKPDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 283 -----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~--~--~i-~~~~~~~~~~a~~~~~~~~~~gkvvi 352 (360)
....++...++.+++++.++.....++++++++++.+|+++ + .+ ++|+|+++++|++.+.+++. ||+|+
T Consensus 311 ~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvvv 389 (398)
T 2dph_A 311 KDAGSGRLHLDFGKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGSP-AKFVI 389 (398)
T ss_dssp HHHHTTEEEEEHHHHHHTTCEEECSSCCGGGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHHHHHHHTTCS-CEEEE
T ss_pred ccccCCcccccHHHHhhcCCEEEEeccCcHHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHHHHHHhcCCc-eEEEE
Confidence 22345566678899999987766677899999999999998 6 45 89999999999999999888 99999
Q ss_pred ecCCCc
Q 018158 353 DIAGGA 358 (360)
Q Consensus 353 ~~~~~~ 358 (360)
+++...
T Consensus 390 ~~~~~~ 395 (398)
T 2dph_A 390 DPHGML 395 (398)
T ss_dssp CTTSCC
T ss_pred ecCccc
Confidence 997554
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-54 Score=410.22 Aligned_cols=345 Identities=17% Similarity=0.243 Sum_probs=292.6
Q ss_pred CCCCCcccceeEEecc-------------CCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccC----------
Q 018158 3 QTTPNHTQSVVGWAAH-------------DPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKND---------- 59 (360)
Q Consensus 3 ~~~~~~~~~~~~~~~~-------------~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~---------- 59 (360)
+++|+| |+|+++... ++++.++++++|.|+|+++||||||.+++||++|++...+.
T Consensus 25 ~~iP~t-mkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~ 103 (456)
T 3krt_A 25 LPLPES-YRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLER 103 (456)
T ss_dssp SCCCSC-EEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHH
T ss_pred CCCCcc-eEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhh
Confidence 358888 777777653 23468999999999999999999999999999998764321
Q ss_pred ---CC----CCCCC-CccccccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCC
Q 018158 60 ---WG----ITMYP-VVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGS 131 (360)
Q Consensus 60 ---~~----~~~~p-~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~ 131 (360)
.+ ...+| .++|||++|+|+++|++|++|++||||++.+. .|..|..|..+.++.|.+..+ .|. .
T Consensus 104 ~g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~--~c~~~~~~~~~~~~~c~~~~~--~G~----~ 175 (456)
T 3krt_A 104 YGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL--SVELESSDGHNDTMLDPEQRI--WGF----E 175 (456)
T ss_dssp HHTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCE--ECCCCSGGGTTSGGGCTTCEE--TTT----T
T ss_pred ccccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCC--cccccccccccccccCccccc--ccc----C
Confidence 11 12456 68999999999999999999999999998654 688999999999999987432 121 1
Q ss_pred ccccceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCe
Q 018158 132 ITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHH 210 (360)
Q Consensus 132 ~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~ 210 (360)
..+|+|+||+++++++++++|+++++++||++++.+.|||+++.......+++|++|||+|+ |++|++++|+|+.+|++
T Consensus 176 ~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~ 255 (456)
T 3krt_A 176 TNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGAN 255 (456)
T ss_dssp SSSCSSBSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCE
T ss_pred CCCCcccceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCe
Confidence 34599999999999999999999999999999999999999997652222559999999999 99999999999999999
Q ss_pred EEEEeCChhHHHHHHHHcCCCeEeeCccH--------------------HHHHhc--CCCcCEEEEcCCCcccHHHHHHH
Q 018158 211 VTVISTSPSKEKEAKELLGADEFILSTNA--------------------MQMQAG--KRTLDFILDTVSAKHSLGPILEL 268 (360)
Q Consensus 211 V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--------------------~~~~~~--~~~~d~vid~~g~~~~~~~~~~~ 268 (360)
|+++++++++++.+++ +|+++++++.+. +.+... +.++|++||++|. ..+..++++
T Consensus 256 vi~~~~~~~~~~~~~~-lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~-~~~~~~~~~ 333 (456)
T 3krt_A 256 PICVVSSPQKAEICRA-MGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGR-ETFGASVFV 333 (456)
T ss_dssp EEEEESSHHHHHHHHH-HTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCH-HHHHHHHHH
T ss_pred EEEEECCHHHHHHHHh-hCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCc-hhHHHHHHH
Confidence 9999999999999988 999999987663 122222 5799999999998 478999999
Q ss_pred hccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCC
Q 018158 269 LKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDV 346 (360)
Q Consensus 269 l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~ 346 (360)
++++|+++.+|...+ ...++...+..+++++.++.....+++.++++++++|++++.+ ++|+|+++++|++.+.+++.
T Consensus 334 l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~eA~~~l~~~~~ 413 (456)
T 3krt_A 334 TRKGGTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLH 413 (456)
T ss_dssp EEEEEEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCS
T ss_pred hhCCcEEEEEecCCCcccccCHHHHHhcCeEEEEeccCCHHHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHHhCCC
Confidence 999999999998764 3456667788899999999998888899999999999999888 89999999999999999999
Q ss_pred ceeEEEecCCCc
Q 018158 347 RYRFVIDIAGGA 358 (360)
Q Consensus 347 ~gkvvi~~~~~~ 358 (360)
.||+|+.+.++.
T Consensus 414 ~GKvvv~~~~~~ 425 (456)
T 3krt_A 414 QGKVGVLCLAPE 425 (456)
T ss_dssp SSEEEEESSCSS
T ss_pred CCcEEEEeCCCC
Confidence 999999986643
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-54 Score=401.80 Aligned_cols=336 Identities=21% Similarity=0.243 Sum_probs=279.4
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCC-CCe------EEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENG-VND------VTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGS 82 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~-~~e------vlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~ 82 (360)
|+++++. +++.++++++|.|+|+ ++| |||||++++||++|+++++|.+ ...+|.++|||++|+|+++|+
T Consensus 3 Mka~~~~---~~~~l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~-~~~~p~v~GhE~~G~V~~vG~ 78 (398)
T 1kol_A 3 NRGVVYL---GSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRT-TAQVGLVLGHEITGEVIEKGR 78 (398)
T ss_dssp EEEEEEE---ETTEEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCS-CCCTTCBCCCCEEEEEEEECT
T ss_pred cEEEEEe---cCCceEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCC-CCCCCcccCcccEEEEEEECC
Confidence 6766654 2357999999999997 898 9999999999999999999876 345789999999999999999
Q ss_pred CCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCC----ccccceeeEEEeecc--eeEECCCCCC
Q 018158 83 NVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGS----ITYGGYSEMLVADYR--FVVHVPENIA 156 (360)
Q Consensus 83 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~----~~~g~~~~~~~v~~~--~~~~iP~~~~ 156 (360)
+|++|++||||++.+ ..+|+.|.+|++|++++|.+......+. ..|. ...|+|+||+++|++ +++++|++++
T Consensus 79 ~v~~~~vGDrV~~~~-~~~cg~C~~C~~g~~~~C~~~~~~~~~~-~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~~~~ 156 (398)
T 1kol_A 79 DVENLQIGDLVSVPF-NVACGRCRSCKEMHTGVCLTVNPARAGG-AYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDK 156 (398)
T ss_dssp TCCSCCTTCEEECCS-EECCSSSHHHHTTCGGGCSSSCSSSSCE-EBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHH
T ss_pred CCCcCCCCCEEEECC-cCCCCCChHHhCcCcccCCCcccccccc-eeeeccCCCCCceeeeEEEecchhCeEEECCCCcc
Confidence 999999999998754 5689999999999999999753211100 0111 246999999999987 8999999999
Q ss_pred ccc----cccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCC
Q 018158 157 MDA----AAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGAD 231 (360)
Q Consensus 157 ~~~----aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~ 231 (360)
+++ ++++++.+.|||++++.. . +++|++|||+|+|++|++++|+||.+|+ +|+++++++++++.+++ +|++
T Consensus 157 ~~~~~~~aa~l~~~~~ta~~al~~~-~--~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~-lGa~ 232 (398)
T 1kol_A 157 AMEKIRDLTCLSDILPTGYHGAVTA-G--VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA-QGFE 232 (398)
T ss_dssp HHHTHHHHGGGGTHHHHHHHHHHHT-T--CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-TTCE
T ss_pred hhhhcccccccccHHHHHHHHHHHc-C--CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH-cCCc
Confidence 888 789999999999999754 3 5599999999999999999999999999 69999999999999988 9997
Q ss_pred eEeeCccHH----HHHhc--CCCcCEEEEcCCCcc---------------cHHHHHHHhccCCEEEEeCCC-CC------
Q 018158 232 EFILSTNAM----QMQAG--KRTLDFILDTVSAKH---------------SLGPILELLKVNGTLSVVGAP-EA------ 283 (360)
Q Consensus 232 ~~v~~~~~~----~~~~~--~~~~d~vid~~g~~~---------------~~~~~~~~l~~~G~~v~~g~~-~~------ 283 (360)
++++.+.+ .+... +.++|++||++|... .+..++++++++|+++.+|.. .+
T Consensus 233 -~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~ 311 (398)
T 1kol_A 233 -IADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVD 311 (398)
T ss_dssp -EEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSS
T ss_pred -EEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccCCcccccc
Confidence 77776432 22222 468999999999752 578999999999999999975 21
Q ss_pred ------CcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCc---cce-EEECCccHHHHHHHHHcCCCceeEEEe
Q 018158 284 ------PFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNIT---CNI-EVIKPDQINEALDRLARNDVRYRFVID 353 (360)
Q Consensus 284 ------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~---~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 353 (360)
...++...++.+++++.++.....++++++++++.+|+++ +.+ ++|+|+++++|++.+.+++. ||+|++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvvi~ 390 (398)
T 1kol_A 312 AAAKIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGVP-KKFVID 390 (398)
T ss_dssp HHHHTTCCCCCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHHHHHHHTCS-CEEEEC
T ss_pred cccccccccccHHHHhhcccEEEecccChHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHHHHHHhCCCc-eEEEEE
Confidence 2344555678889999987655567788999999999998 344 89999999999999999887 999999
Q ss_pred cCCC
Q 018158 354 IAGG 357 (360)
Q Consensus 354 ~~~~ 357 (360)
++..
T Consensus 391 ~~~~ 394 (398)
T 1kol_A 391 PHKT 394 (398)
T ss_dssp TTCS
T ss_pred eCCc
Confidence 8654
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-54 Score=401.11 Aligned_cols=328 Identities=16% Similarity=0.194 Sum_probs=277.1
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCC---CCccccccceEEEEecCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMY---PVVPGHEITGIITKVGSNVKN 86 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~---p~~~G~e~~G~V~~vG~~v~~ 86 (360)
|||+++.. +...++++++|.|+|+++||||||++++||++|+++++|.++...+ |.++|||++| |+++|++ ++
T Consensus 1 MkA~~~~~--~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G-V~~vG~~-~~ 76 (357)
T 2b5w_A 1 MKAIAVKR--GEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVG-VVVDPND-TE 76 (357)
T ss_dssp CEEEEEET--TCSSCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTTSCTTCSEEECCSEEEE-EEEECTT-SS
T ss_pred CeEEEEeC--CCCceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCCCCCCCCCcccCceeEE-EEEECCC-CC
Confidence 45555533 3235999999999999999999999999999999999997654556 8999999999 9999999 99
Q ss_pred CCCCCEEEeccCccC--CCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCcccccccc
Q 018158 87 FKVGDRAAVGCLAAA--CMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLL 164 (360)
Q Consensus 87 ~~~Gd~V~~~~~~~~--~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~ 164 (360)
|++||||++.+.. . |+.|.+|+.|++++|.+..+...|.. ..+|+|+||+.+|+++++++|++++ + +|+++
T Consensus 77 ~~vGdrV~~~~~~-~~~cg~C~~C~~g~~~~C~~~~~~~~g~~----~~~G~~aey~~v~~~~~~~iP~~~~-~-~aal~ 149 (357)
T 2b5w_A 77 LEEGDIVVPTVRR-PPASGTNEYFERDQPDMAPDGMYFERGIV----GAHGYMSEFFTSPEKYLVRIPRSQA-E-LGFLI 149 (357)
T ss_dssp CCTTCEEEECSEE-CCTTCCCHHHHTTCGGGCCTTSCEEETTB----EECCSCBSEEEEEGGGEEECCGGGS-T-TGGGH
T ss_pred CCCCCEEEECCcC-CCCCCCChHHhCcCcccCCCCcccccCcc----CCCcceeeEEEEchHHeEECCCCcc-h-hhhhh
Confidence 9999999886543 4 99999999999999998543211210 3469999999999999999999999 5 55688
Q ss_pred chhhhhhchhhccCCCCCCCC------cEEEEEcCChHHHHH-HHHH-HHcCCe-EEEEeCChh---HHHHHHHHcCCCe
Q 018158 165 CAGITVFCPMKDNNLIDSPAK------KRIGIVGLGGLGHVA-VKFG-KAFGHH-VTVISTSPS---KEKEAKELLGADE 232 (360)
Q Consensus 165 ~~~~ta~~~l~~~~~~~~~~~------~~vlI~Gag~vG~~a-iqla-~~~G~~-V~~~~~~~~---~~~~~~~~~g~~~ 232 (360)
.++.|||++++.. + +++| ++|||+|+|++|+++ +|+| |.+|++ |++++++++ +++.+++ +|+++
T Consensus 150 ~~~~ta~~al~~~-~--~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~-lGa~~ 225 (357)
T 2b5w_A 150 EPISITEKALEHA-Y--ASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE-LDATY 225 (357)
T ss_dssp HHHHHHHHHHHHH-H--HTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH-TTCEE
T ss_pred chHHHHHHHHHhc-C--CCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH-cCCcc
Confidence 8999999999654 4 4499 999999999999999 9999 999997 999999998 9999988 99998
Q ss_pred EeeCccHHH--HHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC-CCcccChhhH----hccCcEEEEeecC
Q 018158 233 FILSTNAMQ--MQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE-APFELPSFPL----IFGKRSVKGSMTG 305 (360)
Q Consensus 233 ~v~~~~~~~--~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~----~~~~~~i~~~~~~ 305 (360)
+ ++++.+. ..+...++|++||++|....+..++++++++|+++.+|... ....++...+ +.+++++.++...
T Consensus 226 v-~~~~~~~~~i~~~~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 304 (357)
T 2b5w_A 226 V-DSRQTPVEDVPDVYEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNS 304 (357)
T ss_dssp E-ETTTSCGGGHHHHSCCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHTTCEEEECCCC
T ss_pred c-CCCccCHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHhCCeEEEEeccC
Confidence 8 8765322 22223389999999998767899999999999999999876 5556666667 7899999999888
Q ss_pred CHHHHHHHHHHHhcC--C-Cccce-EEECCccHHHHHHHHHcCCCceeEEEecCC
Q 018158 306 GMRETQEMMNVCGKY--N-ITCNI-EVIKPDQINEALDRLARNDVRYRFVIDIAG 356 (360)
Q Consensus 306 ~~~~~~~~~~~l~~~--~-l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~ 356 (360)
..+++++++++++++ + +++.+ ++|+++++++|++.+ +..||+|+++++
T Consensus 305 ~~~~~~~~~~l~~~g~~~~~~~~i~~~~~l~~~~~A~~~~---~~~gKvvi~~~~ 356 (357)
T 2b5w_A 305 HVEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD---DTTIKTAIEFST 356 (357)
T ss_dssp CHHHHHHHHHHHHHSCHHHHHHHEEEEEEGGGGGGGGCCS---TTCCEEEEECCC
T ss_pred CHHHHHHHHHHHHhCchhhhhhhcceeecHHHHHHHHHHh---CCCceEEEEecC
Confidence 888999999999999 8 67777 899999999999988 346899999864
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-53 Score=393.62 Aligned_cols=311 Identities=19% Similarity=0.233 Sum_probs=275.2
Q ss_pred CCCCcccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC-CCCCCccccccceEEEEecC
Q 018158 4 TTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIITKVGS 82 (360)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~ 82 (360)
++|.| |||+++..+++++.+++++.|.|+|+++||+|||++++||++|++.+.|.++. ..+|.++|||++|+|+++|+
T Consensus 24 ~~p~~-MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~ 102 (353)
T 4dup_A 24 SLPQE-MRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVGP 102 (353)
T ss_dssp CCCSS-EEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEEEECT
T ss_pred CCChh-eeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEEEECC
Confidence 47888 88888877777789999999999999999999999999999999999998753 35689999999999999999
Q ss_pred CCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCcccccc
Q 018158 83 NVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAP 162 (360)
Q Consensus 83 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~ 162 (360)
+|++|++||||++. ..+|+|+||+.+|+++++++|+++++++||+
T Consensus 103 ~v~~~~vGdrV~~~-----------------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~ 147 (353)
T 4dup_A 103 GVSGYAVGDKVCGL-----------------------------------ANGGAYAEYCLLPAGQILPFPKGYDAVKAAA 147 (353)
T ss_dssp TCCSCCTTCEEEEE-----------------------------------CSSCCSBSEEEEEGGGEEECCTTCCHHHHHT
T ss_pred CCCCCCCCCEEEEe-----------------------------------cCCCceeeEEEEcHHHcEeCCCCCCHHHHhh
Confidence 99999999999853 2459999999999999999999999999999
Q ss_pred ccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH
Q 018158 163 LLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ 241 (360)
Q Consensus 163 l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~ 241 (360)
+++++.|||+++.....++ +|++|||+|+ |++|++++|+|+..|++|+++++++++++.+++ +|++.++++.+.+.
T Consensus 148 l~~~~~ta~~~l~~~~~~~--~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~~~~~~~~~~ 224 (353)
T 4dup_A 148 LPETFFTVWANLFQMAGLT--EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-LGAKRGINYRSEDF 224 (353)
T ss_dssp SHHHHHHHHHHHTTTTCCC--TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HTCSEEEETTTSCH
T ss_pred hhhHHHHHHHHHHHhcCCC--CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCCEEEeCCchHH
Confidence 9999999999997666655 9999999976 999999999999999999999999999999998 99999998876532
Q ss_pred HHh----cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCc-c-cChhhHhccCcEEEEeecCCHHH------
Q 018158 242 MQA----GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPF-E-LPSFPLIFGKRSVKGSMTGGMRE------ 309 (360)
Q Consensus 242 ~~~----~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~-~~~~~~~~~~~~i~~~~~~~~~~------ 309 (360)
... .++++|++|||+|.. .+..++++++++|+++.+|...+.. . ++...++.+++++.++......+
T Consensus 225 ~~~~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ 303 (353)
T 4dup_A 225 AAVIKAETGQGVDIILDMIGAA-YFERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAI 303 (353)
T ss_dssp HHHHHHHHSSCEEEEEESCCGG-GHHHHHHTEEEEEEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHH
T ss_pred HHHHHHHhCCCceEEEECCCHH-HHHHHHHHhccCCEEEEEEecCCCcccCCCHHHHHhcCceEEEEeccccchhhhHHH
Confidence 221 167899999999986 6799999999999999999876432 3 66777888999999988755332
Q ss_pred ----HHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 310 ----TQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 310 ----~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
++++++++++|++++.+ ++|+++++++|++.+++++..||+|+++
T Consensus 304 ~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 353 (353)
T 4dup_A 304 RDDLLSEVWPLLEAGTVAPVIHKVFAFEDVADAHRLLEEGSHVGKVMLTV 353 (353)
T ss_dssp HHHHHHHTHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred HHHHHHHHHHHHHCCCccCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 67888999999999887 8999999999999999999999999975
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-53 Score=402.27 Aligned_cols=342 Identities=17% Similarity=0.189 Sum_probs=286.2
Q ss_pred CCCCcccceeEEeccC-----------CCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhc---------------
Q 018158 4 TTPNHTQSVVGWAAHD-----------PSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVK--------------- 57 (360)
Q Consensus 4 ~~~~~~~~~~~~~~~~-----------~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~--------------- 57 (360)
++|+| |+|.++...+ +++.++++++|.|+|++|||+|||++++||++|++...
T Consensus 20 ~~p~t-mkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~ 98 (447)
T 4a0s_A 20 PVPDT-YLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNAR 98 (447)
T ss_dssp CCCSE-EEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHT
T ss_pred CCChh-heeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhcc
Confidence 47888 7777666554 23479999999999999999999999999999985432
Q ss_pred -cCCC-CCCCC-CccccccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccc
Q 018158 58 -NDWG-ITMYP-VVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITY 134 (360)
Q Consensus 58 -g~~~-~~~~p-~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~ 134 (360)
|.+. ...+| .++|||++|+|+++|++|++|++||||++.+.. .|+.| +|..+.++.|.+..+ .|.. ...
T Consensus 99 ~g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~-~~~~~-~~~~~~~~~c~~~~~--~G~~----~~~ 170 (447)
T 4a0s_A 99 QGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAH-VDEQE-PATHGDGMLGTEQRA--WGFE----TNF 170 (447)
T ss_dssp TCGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEE-CCTTS-GGGGTCTTCSTTCEE--TTTT----SSS
T ss_pred cCccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCc-CcCcc-ccccccccccccccc--cccc----CCC
Confidence 2211 12455 689999999999999999999999999886543 55555 566788999987532 1221 235
Q ss_pred cceeeEEEeecceeEECCCCCCccccccccchhhhhhchhhcc--CCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeE
Q 018158 135 GGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDN--NLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHV 211 (360)
Q Consensus 135 g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V 211 (360)
|+|+||+++++++++++|+++++++||++++++.|||+++... .. +++|++|||+|+ |++|++++|+|+.+|++|
T Consensus 171 G~~aey~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~--~~~g~~VlV~GasG~iG~~a~qla~~~Ga~v 248 (447)
T 4a0s_A 171 GGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQ--MKQGDIVLIWGASGGLGSYAIQFVKNGGGIP 248 (447)
T ss_dssp CSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTC--CCTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred CceeeeeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccC--CCCCCEEEEECCCCHHHHHHHHHHHHcCCEE
Confidence 9999999999999999999999999999999999999999653 44 459999999999 999999999999999999
Q ss_pred EEEeCChhHHHHHHHHcCCCeEeeCccHH---------------------HHHh-cCCCcCEEEEcCCCcccHHHHHHHh
Q 018158 212 TVISTSPSKEKEAKELLGADEFILSTNAM---------------------QMQA-GKRTLDFILDTVSAKHSLGPILELL 269 (360)
Q Consensus 212 ~~~~~~~~~~~~~~~~~g~~~~v~~~~~~---------------------~~~~-~~~~~d~vid~~g~~~~~~~~~~~l 269 (360)
+++++++++++.+++ +|+++++++.+.+ .+.. .+.++|++||++|.. .+..+++++
T Consensus 249 i~~~~~~~~~~~~~~-lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~-~~~~~~~~l 326 (447)
T 4a0s_A 249 VAVVSSAQKEAAVRA-LGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRV-TFGLSVIVA 326 (447)
T ss_dssp EEEESSHHHHHHHHH-TTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHH-HHHHHHHHS
T ss_pred EEEeCCHHHHHHHHh-cCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCch-HHHHHHHHH
Confidence 999999999999988 9999998865432 1111 167899999999985 689999999
Q ss_pred ccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCc
Q 018158 270 KVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVR 347 (360)
Q Consensus 270 ~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~ 347 (360)
+++|+++.+|...+ ...++...++.+++++.++.....++++++++++++|++++.+ ++|+|+++++|++.+.+++..
T Consensus 327 ~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~ 406 (447)
T 4a0s_A 327 RRGGTVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGANHEEQQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQTSRQV 406 (447)
T ss_dssp CTTCEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCS
T ss_pred hcCCEEEEEecCCCcccccCHHHHHhCCCEEEecCCCCHHHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHhcCCCc
Confidence 99999999998764 3456667788899999999998888999999999999999887 899999999999999999999
Q ss_pred eeEEEecCCCc
Q 018158 348 YRFVIDIAGGA 358 (360)
Q Consensus 348 gkvvi~~~~~~ 358 (360)
||+|+.+.+++
T Consensus 407 GKvvv~~~~~~ 417 (447)
T 4a0s_A 407 GKVAVLCMAPE 417 (447)
T ss_dssp SEEEEESSCCS
T ss_pred eEEEEEeCCCC
Confidence 99999986654
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-52 Score=382.38 Aligned_cols=308 Identities=20% Similarity=0.244 Sum_probs=268.6
Q ss_pred ccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCC
Q 018158 9 TQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 9 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
||||+++..+++++.+++++.+.|+|++|||+|||++++||++|++++.|.++...+|.++|||++|+|+++|++|++|+
T Consensus 1 MMkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~ 80 (325)
T 3jyn_A 1 MAKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFK 80 (325)
T ss_dssp CEEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred CcEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCceeEEEEEEECCCCCCCC
Confidence 68888888778878899999999999999999999999999999999999886667899999999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||||++.. ..+|+|+||+.+|+++++++|+++++++|+++++.+.
T Consensus 81 ~GdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ 126 (325)
T 3jyn_A 81 VGDRVAYGT----------------------------------GPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGL 126 (325)
T ss_dssp TTCEEEESS----------------------------------SSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCEEEEec----------------------------------CCCccccceEEecHHHeEECCCCCCHHHHhhhhhhHH
Confidence 999998632 2469999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHH---h
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQ---A 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~---~ 244 (360)
|||+++....+++ +|++|||+|+ |++|++++|+|+..|++|+++++++++++.+++ +|+++++|+.+.+... +
T Consensus 127 ta~~~l~~~~~~~--~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~Ga~~~~~~~~~~~~~~~~~ 203 (325)
T 3jyn_A 127 TVQYLLRQTYQVK--PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA-LGAWETIDYSHEDVAKRVLE 203 (325)
T ss_dssp HHHHHHHTTSCCC--TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HTCSEEEETTTSCHHHHHHH
T ss_pred HHHHHHHHhcCCC--CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCCEEEeCCCccHHHHHHH
Confidence 9999998876655 9999999996 999999999999999999999999999999998 9999999987653322 2
Q ss_pred c--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCc-ccChhhHhcc-CcEEEEeec----CCHHH----HHH
Q 018158 245 G--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPF-ELPSFPLIFG-KRSVKGSMT----GGMRE----TQE 312 (360)
Q Consensus 245 ~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~-~~~i~~~~~----~~~~~----~~~ 312 (360)
. ++++|++||++|.. .+..++++++++|+++.+|...+.. .++...+..+ ++.+.+... ..+++ +++
T Consensus 204 ~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (325)
T 3jyn_A 204 LTDGKKCPVVYDGVGQD-TWLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADE 282 (325)
T ss_dssp HTTTCCEEEEEESSCGG-GHHHHHTTEEEEEEEEECCCTTCCCCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHH
T ss_pred HhCCCCceEEEECCChH-HHHHHHHHhcCCCEEEEEecCCCCCCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHH
Confidence 2 46899999999984 6899999999999999999876543 4666666666 566654322 22333 458
Q ss_pred HHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 313 MMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 313 ~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+++++.+|++++.+ ++|+++++++|++.+.+++..||+|+.+
T Consensus 283 ~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~p 325 (325)
T 3jyn_A 283 LFDMLASGKLKVDGIEQYALKDAAKAQIELSARRTTGSTILIP 325 (325)
T ss_dssp HHHHHHTTSSCCCCCEEEEGGGHHHHHHHHHTTCCCSCEEEEC
T ss_pred HHHHHHCCCeeCccccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 89999999999887 9999999999999999999999999864
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-52 Score=384.88 Aligned_cols=308 Identities=19% Similarity=0.283 Sum_probs=263.5
Q ss_pred CCCcccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCC
Q 018158 5 TPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSN 83 (360)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~ 83 (360)
+|.+ |||.++..+++++.++++++|.|+|++|||||||++++||++|++.+.|.++ ...+|.++|||++|+|+++|++
T Consensus 18 ~p~~-MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~ 96 (342)
T 4eye_A 18 GPGS-MKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAPEG 96 (342)
T ss_dssp CCCE-EEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEEECCTT
T ss_pred CCcc-eEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEEEECCC
Confidence 5766 7888887777778899999999999999999999999999999999999875 3478999999999999999999
Q ss_pred CCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccc
Q 018158 84 VKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPL 163 (360)
Q Consensus 84 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l 163 (360)
++ |++||||++. ...|+|+||+.+++++++++|+++++++||++
T Consensus 97 v~-~~vGDrV~~~-----------------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l 140 (342)
T 4eye_A 97 SG-IKPGDRVMAF-----------------------------------NFIGGYAERVAVAPSNILPTPPQLDDAEAVAL 140 (342)
T ss_dssp SS-CCTTCEEEEE-----------------------------------CSSCCSBSEEEECGGGEEECCTTSCHHHHHHH
T ss_pred CC-CCCCCEEEEe-----------------------------------cCCCcceEEEEEcHHHeEECCCCCCHHHHHHh
Confidence 99 9999999863 23599999999999999999999999999999
Q ss_pred cchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH--H
Q 018158 164 LCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA--M 240 (360)
Q Consensus 164 ~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--~ 240 (360)
++++.|||+++.....++ +|++|||+|+ |++|++++|+|+.+|++|+++++++++++.+++ +|+++++++.+. +
T Consensus 141 ~~~~~ta~~~l~~~~~~~--~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~ga~~v~~~~~~~~~ 217 (342)
T 4eye_A 141 IANYHTMYFAYARRGQLR--AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-VGADIVLPLEEGWAK 217 (342)
T ss_dssp TTHHHHHHHHHHTTSCCC--TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HTCSEEEESSTTHHH
T ss_pred hhHHHHHHHHHHHhcCCC--CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCcEEecCchhHHH
Confidence 999999999996666655 9999999999 999999999999999999999999999999998 999999988722 1
Q ss_pred HHHhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-cccChhhHhccCcEEEEeecCC---------HH
Q 018158 241 QMQAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-FELPSFPLIFGKRSVKGSMTGG---------MR 308 (360)
Q Consensus 241 ~~~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~---------~~ 308 (360)
..... ++++|++|||+|.. .+..++++++++|+++.+|...+. ..++...++.+++++.++.... .+
T Consensus 218 ~v~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 296 (342)
T 4eye_A 218 AVREATGGAGVDMVVDPIGGP-AFDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYE 296 (342)
T ss_dssp HHHHHTTTSCEEEEEESCC---CHHHHHHTEEEEEEEEEC----------CCCCGGGTTCEEEECCHHHHHHHCTTHHHH
T ss_pred HHHHHhCCCCceEEEECCchh-HHHHHHHhhcCCCEEEEEEccCCCCCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHH
Confidence 12222 45899999999986 689999999999999999976643 3456666788999999987532 24
Q ss_pred HHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 309 ETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 309 ~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+++.+++++++| +++.+ ++|+++++++|++.+.+++..||+|+++
T Consensus 297 ~~~~~~~l~~~g-l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~P 342 (342)
T 4eye_A 297 TQAGLEKLVAEG-MRPPVSARIPLSEGRQALQDFADGKVYGKMVLVP 342 (342)
T ss_dssp HHHHHHHHHHTT-CCCCEEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred HHHHHHHHHHcC-CCCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 688899999999 98887 8999999999999999999999999974
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-52 Score=382.06 Aligned_cols=307 Identities=19% Similarity=0.189 Sum_probs=263.2
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCC-----CCCCCCCccccccceEEEEecCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDW-----GITMYPVVPGHEITGIITKVGSNV 84 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~-----~~~~~p~~~G~e~~G~V~~vG~~v 84 (360)
||+.++..++++..+++++.|.|+|++|||||||++++||++|++.++|.. ....+|.++|||++|+|+++|++|
T Consensus 7 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG~~v 86 (321)
T 3tqh_A 7 MKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGSDV 86 (321)
T ss_dssp EEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEECTTC
T ss_pred ceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeCCCC
Confidence 777777666666779999999999999999999999999999999998831 145678999999999999999999
Q ss_pred CCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCcccccccc
Q 018158 85 KNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLL 164 (360)
Q Consensus 85 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~ 164 (360)
++|++||||++.+..+ ..+|+|+||+++++++++++|+++++++||+++
T Consensus 87 ~~~~~GdrV~~~~~~~-------------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~ 135 (321)
T 3tqh_A 87 NNVNIGDKVMGIAGFP-------------------------------DHPCCYAEYVCASPDTIIQKLEKLSFLQAASLP 135 (321)
T ss_dssp CSCCTTCEEEEECSTT-------------------------------TCCCCSBSEEEECGGGEEECCTTSCHHHHHHSH
T ss_pred CCCCCCCEEEEccCCC-------------------------------CCCCcceEEEEecHHHhccCCCCCCHHHHhhhh
Confidence 9999999998643110 346999999999999999999999999999999
Q ss_pred chhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHH
Q 018158 165 CAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQ 243 (360)
Q Consensus 165 ~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~ 243 (360)
+++.|||++++. .+ +++|++|+|+|+ |++|++++|+|+.+|++|++++ ++++++.+++ +|+++++|+++.+...
T Consensus 136 ~~~~ta~~al~~-~~--~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~-lGa~~~i~~~~~~~~~ 210 (321)
T 3tqh_A 136 TAGLTALQALNQ-AE--VKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKA-LGAEQCINYHEEDFLL 210 (321)
T ss_dssp HHHHHHHHHHHH-TT--CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHH-HTCSEEEETTTSCHHH
T ss_pred hHHHHHHHHHHh-cC--CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHH-cCCCEEEeCCCcchhh
Confidence 999999999954 44 459999999985 9999999999999999999998 5666888888 9999999988765344
Q ss_pred hcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEee-cCCHHHHHHHHHHHhcCCC
Q 018158 244 AGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSM-TGGMRETQEMMNVCGKYNI 322 (360)
Q Consensus 244 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~l~~~~l 322 (360)
+..+++|++|||+|... ...++++++++|+++.+|...... ....+..+++++.++. ....++++++++++.+|++
T Consensus 211 ~~~~g~D~v~d~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l 287 (321)
T 3tqh_A 211 AISTPVDAVIDLVGGDV-GIQSIDCLKETGCIVSVPTITAGR--VIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKL 287 (321)
T ss_dssp HCCSCEEEEEESSCHHH-HHHHGGGEEEEEEEEECCSTTHHH--HHHHHHHTTCEEECCCCCCCHHHHHHHHHHHHTTSS
T ss_pred hhccCCCEEEECCCcHH-HHHHHHhccCCCEEEEeCCCCchh--hhhhhhhcceEEEEEecCCCHHHHHHHHHHHHCCCc
Confidence 44578999999999875 489999999999999998654222 1224567888888854 3457889999999999999
Q ss_pred ccce-EEECCccHHHHHHHHHcCCCceeEEEecC
Q 018158 323 TCNI-EVIKPDQINEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 323 ~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
++.+ ++|+++++++|++.+++++..||+|+++.
T Consensus 288 ~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~~ 321 (321)
T 3tqh_A 288 RIEISRIFQLSEAVTAHELLETGHVRGKLVFKVR 321 (321)
T ss_dssp CCCEEEEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred ccccccEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence 9987 89999999999999999999999999874
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-51 Score=379.76 Aligned_cols=311 Identities=21% Similarity=0.275 Sum_probs=266.4
Q ss_pred cceeEEeccC---CCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCC
Q 018158 10 QSVVGWAAHD---PSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKN 86 (360)
Q Consensus 10 ~~~~~~~~~~---~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 86 (360)
|||+++..++ +++.++++++|.|+|++|||+|||++++||++|++.+.|. ...+|.++|||++|+|+++|++|++
T Consensus 3 MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~--~~~~p~i~G~e~~G~V~~vG~~v~~ 80 (346)
T 3fbg_A 3 LKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD--VSKAPRVLGFDAIGVVESVGNEVTM 80 (346)
T ss_dssp EEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC--CSSSCBCCCCCEEEEEEEECTTCCS
T ss_pred cEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC--CCCCCcCcCCccEEEEEEeCCCCCc
Confidence 7888877665 6789999999999999999999999999999999999886 4567999999999999999999999
Q ss_pred CCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccch
Q 018158 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCA 166 (360)
Q Consensus 87 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~ 166 (360)
|++||||++... ...+|+|+||+.++++.++++|+++++++||+++++
T Consensus 81 ~~~GdrV~~~~~--------------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~ 128 (346)
T 3fbg_A 81 FNQGDIVYYSGS--------------------------------PDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLT 128 (346)
T ss_dssp CCTTCEEEECCC--------------------------------TTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHH
T ss_pred CCCCCEEEEcCC--------------------------------CCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchh
Confidence 999999986321 135699999999999999999999999999999999
Q ss_pred hhhhhchhhccCCCCCC------CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 167 GITVFCPMKDNNLIDSP------AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 167 ~~ta~~~l~~~~~~~~~------~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
+.|||+++....+ ++ +|++|||+|+ |++|++++|+|+.+|++|+++++++++++.+++ +|+++++++++.
T Consensus 129 ~~ta~~~l~~~~~--~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~vi~~~~~ 205 (346)
T 3fbg_A 129 GITAYETLFDVFG--ISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-MGADIVLNHKES 205 (346)
T ss_dssp HHHHHHHHHTTSC--CCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-HTCSEEECTTSC
T ss_pred HHHHHHHHHHhcC--CccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCcEEEECCcc
Confidence 9999999976554 44 8999999966 999999999999999999999999999999999 999999988753
Q ss_pred --HHHHhc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCC----------
Q 018158 240 --MQMQAG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGG---------- 306 (360)
Q Consensus 240 --~~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~---------- 306 (360)
+..... ++++|++|||+|....+..++++++++|+++.+|... ..++...+..+++++.++....
T Consensus 206 ~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (346)
T 3fbg_A 206 LLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFE--NDQDLNALKPKSLSFSHEFMFARPLNQTDDMI 283 (346)
T ss_dssp HHHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEEEEEEESSCCS--SCBCGGGGTTTTCEEEECCTTHHHHTTCTTTH
T ss_pred HHHHHHHhCCCCccEEEECCCchHHHHHHHHHhccCCEEEEECCCC--CCCccccccccceEEEEEEEecccccchhhHH
Confidence 122222 5689999999998777899999999999999998543 3455566778899998865432
Q ss_pred --HHHHHHHHHHHhcCCCccce-EEE---CCccHHHHHHHHHcCCCceeEEEecCCCcC
Q 018158 307 --MRETQEMMNVCGKYNITCNI-EVI---KPDQINEALDRLARNDVRYRFVIDIAGGAR 359 (360)
Q Consensus 307 --~~~~~~~~~~l~~~~l~~~i-~~~---~~~~~~~a~~~~~~~~~~gkvvi~~~~~~~ 359 (360)
.+.++++++++++|++++.+ ++| +++++++|++.+.+++..||+|+++.++++
T Consensus 284 ~~~~~~~~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~~~~~ 342 (346)
T 3fbg_A 284 KHHEYLEDITNKVEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLNEGHH 342 (346)
T ss_dssp HHHHHHHHHHHHHHTTSSCCCEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC-----
T ss_pred HHHHHHHHHHHHHHCCCEECCccceecCCCHHHHHHHHHHHhcCCcceEEEEecCCccc
Confidence 24578899999999999887 777 999999999999999999999999988753
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-51 Score=381.82 Aligned_cols=310 Identities=19% Similarity=0.231 Sum_probs=266.9
Q ss_pred cceeEEecc---CCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCC
Q 018158 10 QSVVGWAAH---DPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKN 86 (360)
Q Consensus 10 ~~~~~~~~~---~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 86 (360)
|||+++..+ ++++.++++++|.|+|+++||+|||++++||++|++.+.|.++...+|.++|||++|+|+++|++|++
T Consensus 23 MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~ 102 (363)
T 4dvj_A 23 MKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVSAVGPDVTL 102 (363)
T ss_dssp EEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC--CCSBCCCCCEEEEEEEECTTCCS
T ss_pred eEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCCCCCCCcccceeEEEEEEeCCCCCC
Confidence 677776655 56789999999999999999999999999999999999998766678999999999999999999999
Q ss_pred CCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccch
Q 018158 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCA 166 (360)
Q Consensus 87 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~ 166 (360)
|++||||+.... ...+|+|+||+.+|++.++++|+++++++||+++++
T Consensus 103 ~~vGdrV~~~~~--------------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~ 150 (363)
T 4dvj_A 103 FRPGDEVFYAGS--------------------------------IIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLT 150 (363)
T ss_dssp CCTTCEEEECCC--------------------------------TTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTSHHH
T ss_pred CCCCCEEEEccC--------------------------------CCCCccceEEEEeCHHHeeECCCCCCHHHHHhhhhH
Confidence 999999986321 135699999999999999999999999999999999
Q ss_pred hhhhhchhhccCCCCCC-----CCcEEEEEcC-ChHHHHHHHHHHH-cCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 167 GITVFCPMKDNNLIDSP-----AKKRIGIVGL-GGLGHVAVKFGKA-FGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 167 ~~ta~~~l~~~~~~~~~-----~~~~vlI~Ga-g~vG~~aiqla~~-~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
+.|||+++....+ ++ +|++|||+|+ |++|++++|+||. .|++|+++++++++++.+++ +|+++++++.+.
T Consensus 151 ~~ta~~al~~~~~--~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~-lGad~vi~~~~~ 227 (363)
T 4dvj_A 151 SITAWEAFFDRLD--VNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS-LGAHHVIDHSKP 227 (363)
T ss_dssp HHHHHHHHHTTSC--TTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH-TTCSEEECTTSC
T ss_pred HHHHHHHHHHhhC--cCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH-cCCCEEEeCCCC
Confidence 9999999965544 44 7999999996 9999999999998 48899999999999999998 999999998753
Q ss_pred --HHHHhc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCC----------
Q 018158 240 --MQMQAG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGG---------- 306 (360)
Q Consensus 240 --~~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~---------- 306 (360)
+..... ++++|++|||+|....+..++++++++|+++.+|.. ..++...+..+++++.++....
T Consensus 228 ~~~~v~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~---~~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~ 304 (363)
T 4dvj_A 228 LAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDP---SAFDIMLFKRKAVSIHHELMFTRPMFGTPDMS 304 (363)
T ss_dssp HHHHHHTTCSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEECSCC---SSCCGGGGTTTTCEEEECCTTHHHHHTCTTTH
T ss_pred HHHHHHHhcCCCceEEEECCCchhhHHHHHHHhcCCCEEEEECCC---CccchHHHhhccceEEEEEeeccccccCcchh
Confidence 222222 568999999999877789999999999999999653 3456667788899998866532
Q ss_pred --HHHHHHHHHHHhcCCCccce-EEE---CCccHHHHHHHHHcCCCceeEEEecCCC
Q 018158 307 --MRETQEMMNVCGKYNITCNI-EVI---KPDQINEALDRLARNDVRYRFVIDIAGG 357 (360)
Q Consensus 307 --~~~~~~~~~~l~~~~l~~~i-~~~---~~~~~~~a~~~~~~~~~~gkvvi~~~~~ 357 (360)
.+.++++++++++|++++.+ ++| +++++++|++.+.+++..||+|+++.+-
T Consensus 305 ~~~~~~~~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~~~~ 361 (363)
T 4dvj_A 305 EQGRLLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVIEGFGL 361 (363)
T ss_dssp HHHHHHHHHHHHHHHTSSCCCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEECSCC
T ss_pred hHHHHHHHHHHHHHCCCeeccccceecCCCHHHHHHHHHHHHhCCCceEEEEeCccc
Confidence 24578999999999999887 666 9999999999999999999999998653
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-52 Score=386.41 Aligned_cols=327 Identities=18% Similarity=0.290 Sum_probs=269.7
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCC-CeEEEEEeeeecccchhhhhcc--CCCCCCC---CCccccccceEEEEecCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGV-NDVTIKILYCGICHTDIHHVKN--DWGITMY---PVVPGHEITGIITKVGSN 83 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~-~evlVkv~~~~i~~~D~~~~~g--~~~~~~~---p~~~G~e~~G~V~~vG~~ 83 (360)
|+|.++...+. +++++++|.|+|++ +||||||++++||++|++++.| .++...+ |.++|||++|+|++ ++
T Consensus 1 MkA~~~~~~g~--~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~--~~ 76 (366)
T 2cdc_A 1 MKAIIVKPPNA--GVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEE--SY 76 (366)
T ss_dssp CEEEEECTTSC--CCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC-------CCSCEECCSEEEEEECS--CC
T ss_pred CeEEEEeCCCC--ceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCCCCcCCCCCcCCcceEEEEEe--CC
Confidence 45555544332 49999999999999 9999999999999999999998 5543456 89999999999999 77
Q ss_pred CCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCc-cccceeeEEEeecceeEECCCCCCcccccc
Q 018158 84 VKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSI-TYGGYSEMLVADYRFVVHVPENIAMDAAAP 162 (360)
Q Consensus 84 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~-~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~ 162 (360)
++|++||||++.+. .+|+.|.+|+.|++++|++..+...| .. .+|+|+||+++++++++++|++++ ++| +
T Consensus 77 -~~~~~GDrV~~~~~-~~cg~C~~C~~g~~~~C~~~~~~~~g-----~~~~~G~~aey~~v~~~~~~~iP~~l~-~~A-a 147 (366)
T 2cdc_A 77 -HGFSQGDLVMPVNR-RGCGICRNCLVGRPDFCETGEFGEAG-----IHKMDGFMREWWYDDPKYLVKIPKSIE-DIG-I 147 (366)
T ss_dssp -SSCCTTCEEEECSE-ECCSSSHHHHTTCGGGCSSSCCEEET-----TBEECCSCBSEEEECGGGEEEECGGGT-TTG-G
T ss_pred -CCCCCCCEEEEcCC-CCCCCChhhhCcCcccCCCCCcccCC-----ccCCCCceeEEEEechHHeEECcCCcc-hhh-h
Confidence 89999999988654 48999999999999999975332112 12 569999999999999999999999 776 4
Q ss_pred ccchhhhhhchhh-----ccCCCCCC--C-------CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh---hHHHHHH
Q 018158 163 LLCAGITVFCPMK-----DNNLIDSP--A-------KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP---SKEKEAK 225 (360)
Q Consensus 163 l~~~~~ta~~~l~-----~~~~~~~~--~-------~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~---~~~~~~~ 225 (360)
++..+.|||+++. ... ++ + |++|||+|+|++|++++|+|+.+|++|+++++++ ++++.++
T Consensus 148 l~~~~~ta~~al~~~~~~~~~---~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~ 224 (366)
T 2cdc_A 148 LAQPLADIEKSIEEILEVQKR---VPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIE 224 (366)
T ss_dssp GHHHHHHHHHHHHHHHHHGGG---SSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHH
T ss_pred hcCcHHHHHHHHHhhhhcccC---ccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHH
Confidence 7788999999998 444 56 7 9999999999999999999999999999999998 8888888
Q ss_pred HHcCCCeEeeCccH--HHHHhcCCCcCEEEEcCCCcccH-HHHHHHhccCCEEEEeCCCCCC-cccChhh---HhccCcE
Q 018158 226 ELLGADEFILSTNA--MQMQAGKRTLDFILDTVSAKHSL-GPILELLKVNGTLSVVGAPEAP-FELPSFP---LIFGKRS 298 (360)
Q Consensus 226 ~~~g~~~~v~~~~~--~~~~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~---~~~~~~~ 298 (360)
+ +|++++ | .+. +.+.....++|++||++|....+ +.++++++++|+++.+|..... ..++... ++.++++
T Consensus 225 ~-~ga~~v-~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~ 301 (366)
T 2cdc_A 225 E-TKTNYY-N-SSNGYDKLKDSVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKT 301 (366)
T ss_dssp H-HTCEEE-E-CTTCSHHHHHHHCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEEEEHHHHHHHHHTTCE
T ss_pred H-hCCcee-c-hHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccccChhhhHHHHhcCcE
Confidence 7 999888 7 441 11111236899999999987677 8999999999999999987654 5566666 8889999
Q ss_pred EEEeecCCHHHHHHHHHHHhcCC------Cccce-EEECCccHHHHHHHH-HcCCCceeEEEecC
Q 018158 299 VKGSMTGGMRETQEMMNVCGKYN------ITCNI-EVIKPDQINEALDRL-ARNDVRYRFVIDIA 355 (360)
Q Consensus 299 i~~~~~~~~~~~~~~~~~l~~~~------l~~~i-~~~~~~~~~~a~~~~-~~~~~~gkvvi~~~ 355 (360)
+.++.....++++++++++.+|+ +++.+ ++|+|+++++|++.+ .+++..||+|++++
T Consensus 302 i~g~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi~~~ 366 (366)
T 2cdc_A 302 IIGLVNGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRILWE 366 (366)
T ss_dssp EEECCCCCHHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEEEECC
T ss_pred EEEecCCCHHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEEEecC
Confidence 99988877889999999999999 55666 899999999999994 33566799999874
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-51 Score=379.93 Aligned_cols=315 Identities=19% Similarity=0.257 Sum_probs=261.6
Q ss_pred CCCCCCCcccceeEEeccCCC-CCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC-CCCCCccccccceEEE
Q 018158 1 MAQTTPNHTQSVVGWAAHDPS-GKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIIT 78 (360)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~ 78 (360)
||+++|.+ |+++++...+.+ ..++++++|.|+|+++||+|||++++||++|++.+.|.++. ..+|.++|||++|+|+
T Consensus 19 ~~~~m~~~-mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~ 97 (357)
T 1zsy_A 19 YFQSMPAR-VRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVV 97 (357)
T ss_dssp CCCCCCCC-EEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEEEEE
T ss_pred hhhhCchh-hEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEEEEE
Confidence 46678887 676666433322 12889999999999999999999999999999999987643 3578999999999999
Q ss_pred EecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCcc
Q 018158 79 KVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMD 158 (360)
Q Consensus 79 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~ 158 (360)
++|++|++|++||||++.+ ...|+|+||+.++++.++++|++++++
T Consensus 98 ~vG~~v~~~~vGdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~iP~~l~~~ 143 (357)
T 1zsy_A 98 AVGSNVTGLKPGDWVIPAN----------------------------------AGLGTWRTEAVFSEEALIQVPSDIPLQ 143 (357)
T ss_dssp EECTTCCSCCTTCEEEESS----------------------------------SCSCCSBSEEEEEGGGEEEECSSSCHH
T ss_pred EeCCCCCCCCCCCEEEEcC----------------------------------CCCccceeEEecCHHHcEECCCCCCHH
Confidence 9999999999999998632 135999999999999999999999999
Q ss_pred ccccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCh----hHHHHHHHHcCCCeE
Q 018158 159 AAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSP----SKEKEAKELLGADEF 233 (360)
Q Consensus 159 ~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~----~~~~~~~~~~g~~~~ 233 (360)
+||++++.+.|||+++....+++ +|++|||+|+ |++|++++|+||.+|++|++++++. ++++.+++ +|++++
T Consensus 144 ~Aa~l~~~~~ta~~~l~~~~~~~--~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~-lGa~~v 220 (357)
T 1zsy_A 144 SAATLGVNPCTAYRMLMDFEQLQ--PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKS-LGAEHV 220 (357)
T ss_dssp HHHHTTSHHHHHHHHHHHSSCCC--TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHH-TTCSEE
T ss_pred HHhhhcccHHHHHHHHHHHhccC--CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHh-cCCcEE
Confidence 99999999999999998766655 9999999999 9999999999999999988777543 24677777 999999
Q ss_pred eeCccH--HHHHhc--C-CCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC-CCcccChhhHhccCcEEEEeecCC-
Q 018158 234 ILSTNA--MQMQAG--K-RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE-APFELPSFPLIFGKRSVKGSMTGG- 306 (360)
Q Consensus 234 v~~~~~--~~~~~~--~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~- 306 (360)
+++++. +...+. + .++|++|||+|... ...++++++++|+++.+|... ....++...++.+++++.++....
T Consensus 221 i~~~~~~~~~~~~~~~~~~~~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 299 (357)
T 1zsy_A 221 ITEEELRRPEMKNFFKDMPQPRLALNCVGGKS-STELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQW 299 (357)
T ss_dssp EEHHHHHSGGGGGTTSSSCCCSEEEESSCHHH-HHHHHTTSCTTCEEEECCCCTTCCBCCCHHHHHHSCCEEEECCHHHH
T ss_pred EecCcchHHHHHHHHhCCCCceEEEECCCcHH-HHHHHHhhCCCCEEEEEecCCCCCCCCCHHHHHhcCceEEEEEcchh
Confidence 987543 122222 2 26999999999775 467899999999999998654 345566667788999999986531
Q ss_pred ---------HHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 307 ---------MRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 307 ---------~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
.+.++++++++.+|++++.+ ++|+|+++++|++.+.+++..||+|+++
T Consensus 300 ~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 357 (357)
T 1zsy_A 300 KKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQILTM 357 (357)
T ss_dssp HHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCCcCccceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence 23568899999999998876 9999999999999999988889999975
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-50 Score=374.27 Aligned_cols=313 Identities=19% Similarity=0.272 Sum_probs=262.8
Q ss_pred CCCCCCcccceeEEeccCCCCCceE-EEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEE
Q 018158 2 AQTTPNHTQSVVGWAAHDPSGKITP-YIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITK 79 (360)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~ 79 (360)
|++.|.+ |+++++..++++..+++ +++|.|+|+++||+|||.+++||++|++++.|.++ ...+|.++|||++|+|++
T Consensus 23 m~~~~~~-Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~ 101 (351)
T 1yb5_A 23 MATGQKL-MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEA 101 (351)
T ss_dssp -----CE-EEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEE
T ss_pred hccCcce-EEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEE
Confidence 4455666 78877766666678999 89999999999999999999999999999998764 346789999999999999
Q ss_pred ecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccc
Q 018158 80 VGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDA 159 (360)
Q Consensus 80 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~ 159 (360)
+|++|++|++||||++.. ...|+|+||+.+++++++++|+++++++
T Consensus 102 vG~~v~~~~vGdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~~P~~l~~~~ 147 (351)
T 1yb5_A 102 VGDNASAFKKGDRVFTSS----------------------------------TISGGYAEYALAADHTVYKLPEKLDFKQ 147 (351)
T ss_dssp ECTTCTTCCTTCEEEESC----------------------------------CSSCSSBSEEEEEGGGEEECCTTSCHHH
T ss_pred ECCCCCCCCCCCEEEEeC----------------------------------CCCCcceeEEEECHHHeEECCCCCCHHH
Confidence 999999999999998632 1259999999999999999999999999
Q ss_pred cccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCcc
Q 018158 160 AAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN 238 (360)
Q Consensus 160 aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~ 238 (360)
||++++++.|||+++....+++ +|++++|+|+ |++|++++|+++..|++|+++++++++++.+++ +|++.++|+.+
T Consensus 148 aA~l~~~~~ta~~al~~~~~~~--~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~ga~~~~d~~~ 224 (351)
T 1yb5_A 148 GAAIGIPYFTAYRALIHSACVK--AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ-NGAHEVFNHRE 224 (351)
T ss_dssp HTTTHHHHHHHHHHHHTTSCCC--TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCSEEEETTS
T ss_pred HHhhhhHHHHHHHHHHHhhCCC--CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-cCCCEEEeCCC
Confidence 9999999999999997655554 9999999999 999999999999999999999999999998888 99999998776
Q ss_pred HHHHHh---c--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeec--CCHHHHH
Q 018158 239 AMQMQA---G--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMT--GGMRETQ 311 (360)
Q Consensus 239 ~~~~~~---~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~ 311 (360)
.+.... . ++++|++||++|.. .+..++++++++|+++.+|.. +...++...++.+++++.++.. ...++++
T Consensus 225 ~~~~~~~~~~~~~~~~D~vi~~~G~~-~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 302 (351)
T 1yb5_A 225 VNYIDKIKKYVGEKGIDIIIEMLANV-NLSKDLSLLSHGGRVIVVGSR-GTIEINPRDTMAKESSIIGVTLFSSTKEEFQ 302 (351)
T ss_dssp TTHHHHHHHHHCTTCEEEEEESCHHH-HHHHHHHHEEEEEEEEECCCC-SCEEECTHHHHTTTCEEEECCGGGCCHHHHH
T ss_pred chHHHHHHHHcCCCCcEEEEECCChH-HHHHHHHhccCCCEEEEEecC-CCCccCHHHHHhCCcEEEEEEeecCCHHHHH
Confidence 533222 1 45899999999876 578999999999999999965 3455666778889999999853 2344554
Q ss_pred ----HHHHHHhcCCCccce-EEECCccHHHHHHH-HHcCCCceeEEEec
Q 018158 312 ----EMMNVCGKYNITCNI-EVIKPDQINEALDR-LARNDVRYRFVIDI 354 (360)
Q Consensus 312 ----~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~-~~~~~~~gkvvi~~ 354 (360)
.+.+++.++++++.+ ++|+++++++|++. +++++..||+|+++
T Consensus 303 ~~~~~l~~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~~gKvvi~~ 351 (351)
T 1yb5_A 303 QYAAALQAGMEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL 351 (351)
T ss_dssp HHHHHHHHHHHHTCCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred HHHHHHHHHHHCCCccCccceEEcHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 455577888998887 89999999999998 66667789999974
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-51 Score=375.14 Aligned_cols=314 Identities=19% Similarity=0.218 Sum_probs=258.3
Q ss_pred CCCCCCcccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC--CCCCCCccccccceEEEE
Q 018158 2 AQTTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG--ITMYPVVPGHEITGIITK 79 (360)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~--~~~~p~~~G~e~~G~V~~ 79 (360)
|+.+|.+ |++.++...+ +.++++++|.|+|+++||||||++++||++|++++.|..+ ...+|.++|||++|+|++
T Consensus 1 Ms~~~~~-mka~~~~~~~--~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~ 77 (343)
T 3gaz_A 1 MSLTTPT-MIAAVVEEAN--GPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVA 77 (343)
T ss_dssp -----CE-EEEEEECSTT--CCEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEE
T ss_pred CCCCchh-heEEEEecCC--CceEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEE
Confidence 4556777 6666654333 3499999999999999999999999999999999988653 256899999999999999
Q ss_pred ecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccc
Q 018158 80 VGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDA 159 (360)
Q Consensus 80 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~ 159 (360)
+|++|++|++||||++... +. ...+|+|+||+.++++.++++|+++++++
T Consensus 78 vG~~v~~~~vGdrV~~~~~------------g~------------------~~~~G~~aey~~v~~~~~~~~P~~~~~~~ 127 (343)
T 3gaz_A 78 VGPEVDSFRVGDAVFGLTG------------GV------------------GGLQGTHAQFAAVDARLLASKPAALTMRQ 127 (343)
T ss_dssp ECTTCCSCCTTCEEEEECC------------SS------------------TTCCCSSBSEEEEEGGGEEECCTTSCHHH
T ss_pred ECCCCCCCCCCCEEEEEeC------------CC------------------CCCCcceeeEEEecHHHeeeCCCCCCHHH
Confidence 9999999999999985211 10 02469999999999999999999999999
Q ss_pred cccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCcc
Q 018158 160 AAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN 238 (360)
Q Consensus 160 aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~ 238 (360)
|+++++++.|||+++.....++ +|++|||+|+ |++|++++|+|+..|++|+++ .++++++.+++ +|++. ++..+
T Consensus 128 aa~l~~~~~ta~~~l~~~~~~~--~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~-lGa~~-i~~~~ 202 (343)
T 3gaz_A 128 ASVLPLVFITAWEGLVDRAQVQ--DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRD-LGATP-IDASR 202 (343)
T ss_dssp HHTSHHHHHHHHHHHTTTTCCC--TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHH-HTSEE-EETTS
T ss_pred HHHhhhhHHHHHHHHHHhcCCC--CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHH-cCCCE-eccCC
Confidence 9999999999999996655555 9999999996 999999999999999999999 78999999988 99988 66222
Q ss_pred H--HHHHh--cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCC--------
Q 018158 239 A--MQMQA--GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGG-------- 306 (360)
Q Consensus 239 ~--~~~~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~-------- 306 (360)
. +.... .+.++|++|||+|.. .+..++++++++|+++.+|... .++...+..+++++.++....
T Consensus 203 ~~~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 278 (343)
T 3gaz_A 203 EPEDYAAEHTAGQGFDLVYDTLGGP-VLDASFSAVKRFGHVVSCLGWG---THKLAPLSFKQATYSGVFTLHTLLANEGL 278 (343)
T ss_dssp CHHHHHHHHHTTSCEEEEEESSCTH-HHHHHHHHEEEEEEEEESCCCS---CCCCHHHHHTTCEEEECCTTHHHHHTCSH
T ss_pred CHHHHHHHHhcCCCceEEEECCCcH-HHHHHHHHHhcCCeEEEEcccC---ccccchhhhcCcEEEEEEeccchhcccch
Confidence 1 11222 256899999999975 6899999999999999998765 345567778999999976532
Q ss_pred ---HHHHHHHHHHHhcCCCccce--EEECCccHHHHHHHHHcCCC----ceeEEEecCCC
Q 018158 307 ---MRETQEMMNVCGKYNITCNI--EVIKPDQINEALDRLARNDV----RYRFVIDIAGG 357 (360)
Q Consensus 307 ---~~~~~~~~~~l~~~~l~~~i--~~~~~~~~~~a~~~~~~~~~----~gkvvi~~~~~ 357 (360)
.++++++++++++|++++.+ ++|+++++++|++.+.+++. .||+++++..+
T Consensus 279 ~~~~~~~~~~~~l~~~g~l~~~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~~~ 338 (343)
T 3gaz_A 279 AHFGEMLREADALVQTGKLAPRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVEGH 338 (343)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEECC--
T ss_pred HHHHHHHHHHHHHHHCCCcccCccCcEecHHHHHHHHHHHHcCCCcccccceEEEEeccc
Confidence 26688999999999998876 49999999999999999865 58999998754
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-51 Score=374.96 Aligned_cols=309 Identities=16% Similarity=0.216 Sum_probs=262.1
Q ss_pred ccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCC-CC--CCCCCccccccceEEEEecCCCC
Q 018158 9 TQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDW-GI--TMYPVVPGHEITGIITKVGSNVK 85 (360)
Q Consensus 9 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~-~~--~~~p~~~G~e~~G~V~~vG~~v~ 85 (360)
|||++++..++.++.+++++.|.|+|+++||+|||.+++||++|+++++|.+ +. ..+|.++|||++|+|+++|++|+
T Consensus 1 ~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~ 80 (333)
T 1wly_A 1 MVMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVT 80 (333)
T ss_dssp -CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCC
T ss_pred CcEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCC
Confidence 5788887766666789999999999999999999999999999999999866 22 45789999999999999999999
Q ss_pred CCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccc--cccc
Q 018158 86 NFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDA--AAPL 163 (360)
Q Consensus 86 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~--aa~l 163 (360)
+|++||||+..+ ...|+|+||+.+|++.++++|+++++++ |+++
T Consensus 81 ~~~~GdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l 126 (333)
T 1wly_A 81 DFTVGERVCTCL----------------------------------PPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGL 126 (333)
T ss_dssp SCCTTCEEEECS----------------------------------SSCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHH
T ss_pred CCCCCCEEEEec----------------------------------CCCCcceeEEEecHHHcEeCCCCCChHHhCccch
Confidence 999999997521 0159999999999999999999999999 9999
Q ss_pred cchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH
Q 018158 164 LCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM 242 (360)
Q Consensus 164 ~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 242 (360)
++++.|||+++....+++ +|++++|+|+ |++|++++|+++..|++|+++++++++++.+++ +|++.++|+.+.+..
T Consensus 127 ~~~~~ta~~~l~~~~~~~--~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~g~~~~~d~~~~~~~ 203 (333)
T 1wly_A 127 MLKGMTAQYLLHQTHKVK--PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-LGCHHTINYSTQDFA 203 (333)
T ss_dssp HHHHHHHHHHHHTTSCCC--TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HTCSEEEETTTSCHH
T ss_pred hhhHHHHHHHHHHhhCCC--CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCCEEEECCCHHHH
Confidence 999999999998665555 9999999998 999999999999999999999999999999988 999999887654222
Q ss_pred ---Hhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChh-hHhccC--cEEEEeecC---CH---
Q 018158 243 ---QAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSF-PLIFGK--RSVKGSMTG---GM--- 307 (360)
Q Consensus 243 ---~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~-~~~~~~--~~i~~~~~~---~~--- 307 (360)
... +.++|++||++|. ..+..++++++++|+++.+|...+ ...++.. .++.++ +++.++... ..
T Consensus 204 ~~i~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 282 (333)
T 1wly_A 204 EVVREITGGKGVDVVYDSIGK-DTLQKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEI 282 (333)
T ss_dssp HHHHHHHTTCCEEEEEECSCT-TTHHHHHHTEEEEEEEEECCCTTCCCCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHH
T ss_pred HHHHHHhCCCCCeEEEECCcH-HHHHHHHHhhccCCEEEEEecCCCCcCCCChhHhhhhcCCcEEEEEeehhhccCHHHH
Confidence 221 4589999999998 578999999999999999998663 3455666 677788 888886441 22
Q ss_pred -HHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEecC
Q 018158 308 -RETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 308 -~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
++++++++++.+|++++.+ ++|+++++++|++.+.+++..||+|+++.
T Consensus 283 ~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~ 332 (333)
T 1wly_A 283 DEGSKCLFDAVKAGVLHSSVAKTFPLREAAAAHKYMGGRQTIGSIVLLPQ 332 (333)
T ss_dssp HHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCSCCSEEEEETT
T ss_pred HHHHHHHHHHHHCCCcCCCcceEEeHHHHHHHHHHHHcCCCceEEEEEeC
Confidence 3688999999999999887 89999999999999999888899999875
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-52 Score=379.31 Aligned_cols=297 Identities=19% Similarity=0.262 Sum_probs=243.0
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
||+.++.. +++.++++++|.|+|++|||||||++++||++|++.++|.++...+|.++|||++|+|+++|++|++|++
T Consensus 5 Mka~~~~~--~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v 82 (315)
T 3goh_A 5 HQVWAYQT--KTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVPGVDGAGVIVKVGAKVDSKML 82 (315)
T ss_dssp EEEEEEET--TTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTCCCTTCCCCSEEEEEEEEECTTSCGGGT
T ss_pred eEEEEEeC--CCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCcCCCCCEeeeeeEEEEEEeCCCCCCCCC
Confidence 66666543 6789999999999999999999999999999999999998876788999999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGIT 169 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 169 (360)
||||++.+. ...+|+|+||+.+|+++++++|+++++++||++++++.|
T Consensus 83 GdrV~~~~~--------------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 130 (315)
T 3goh_A 83 GRRVAYHTS--------------------------------LKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLT 130 (315)
T ss_dssp TCEEEEECC--------------------------------TTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHH
T ss_pred CCEEEEeCC--------------------------------CCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHH
Confidence 999986431 135799999999999999999999999999999999999
Q ss_pred hhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCc
Q 018158 170 VFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTL 249 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~ 249 (360)
||+++ ...++ ++|++|||+|+|++|++++|+||.+|++|++++ ++++++.+++ +|++++++ + ....++++
T Consensus 131 a~~al-~~~~~--~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~-lGa~~v~~--d---~~~v~~g~ 200 (315)
T 3goh_A 131 AWQAF-EKIPL--TKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAK-RGVRHLYR--E---PSQVTQKY 200 (315)
T ss_dssp HHHHH-TTSCC--CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHH-HTEEEEES--S---GGGCCSCE
T ss_pred HHHHH-hhcCC--CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHH-cCCCEEEc--C---HHHhCCCc
Confidence 99999 44554 499999999999999999999999999999999 8999999998 99999885 2 23347899
Q ss_pred CEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeec------CCH-------HHHHHHHHH
Q 018158 250 DFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMT------GGM-------RETQEMMNV 316 (360)
Q Consensus 250 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~------~~~-------~~~~~~~~~ 316 (360)
|++|||+|... ...++++++++|+++.+|........+ .+.+.+.+..... ... +.+++++++
T Consensus 201 Dvv~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 276 (315)
T 3goh_A 201 FAIFDAVNSQN-AAALVPSLKANGHIICIQDRIPAPIDP---AFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTL 276 (315)
T ss_dssp EEEECC--------TTGGGEEEEEEEEEECCC-------------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred cEEEECCCchh-HHHHHHHhcCCCEEEEEeCCCCccccc---hhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHH
Confidence 99999999875 488899999999999998654322221 2223333333222 222 246789999
Q ss_pred HhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEecCC
Q 018158 317 CGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDIAG 356 (360)
Q Consensus 317 l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~ 356 (360)
+++|++++.+ ++|+|+++++|++.+. +..||+|+++++
T Consensus 277 ~~~g~l~~~i~~~~~l~~~~~A~~~~~--~~~gKvvi~~~~ 315 (315)
T 3goh_A 277 IAQGKMEIAAPDIFRFEQMIEALDHSE--QTKLKTVLTLNE 315 (315)
T ss_dssp HHTTSSCCCCCEEEEGGGHHHHHHHHH--HHCCCEEEESCC
T ss_pred HHCCCcccccceEecHHHHHHHHHHHH--hcCCcEEEEecC
Confidence 9999999887 9999999999999998 667999999863
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-50 Score=374.99 Aligned_cols=311 Identities=17% Similarity=0.210 Sum_probs=262.5
Q ss_pred CCCcccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC-CCCCCccccccceEEEEecCC
Q 018158 5 TPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIITKVGSN 83 (360)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~ 83 (360)
+|.+ |+++++...+.+..+++++++.|+|+++||+|||.+++||++|++++.|.++. ..+|.++|||++|+|+++|++
T Consensus 19 ~~~~-Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG~~ 97 (354)
T 2j8z_A 19 YFQS-MLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPG 97 (354)
T ss_dssp --CE-EEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEEEECSC
T ss_pred chhh-eeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEECCC
Confidence 4666 67776655555567999999999999999999999999999999999987653 346899999999999999999
Q ss_pred C-CCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCcccccc
Q 018158 84 V-KNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAP 162 (360)
Q Consensus 84 v-~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~ 162 (360)
| ++|++||||++. ...|+|+||+.+++++++++|+++++++||+
T Consensus 98 v~~~~~vGdrV~~~-----------------------------------~~~G~~aey~~v~~~~~~~iP~~ls~~~aa~ 142 (354)
T 2j8z_A 98 CQGHWKIGDTAMAL-----------------------------------LPGGGQAQYVTVPEGLLMPIPEGLTLTQAAA 142 (354)
T ss_dssp C--CCCTTCEEEEE-----------------------------------CSSCCSBSEEEEEGGGEEECCTTCCHHHHTT
T ss_pred cCCCCCCCCEEEEe-----------------------------------cCCCcceeEEEeCHHHcEECCCCCCHHHHHh
Confidence 9 999999999852 2359999999999999999999999999999
Q ss_pred ccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH
Q 018158 163 LLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQ 241 (360)
Q Consensus 163 l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~ 241 (360)
+++++.|||+++....+++ +|++|||+|+ |++|++++|+++..|++|+++++++++++.+++ +|++.++|+.+.+.
T Consensus 143 l~~~~~tA~~al~~~~~~~--~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~ 219 (354)
T 2j8z_A 143 IPEAWLTAFQLLHLVGNVQ--AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEK-LGAAAGFNYKKEDF 219 (354)
T ss_dssp SHHHHHHHHHHHTTTSCCC--TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HTCSEEEETTTSCH
T ss_pred ccchHHHHHHHHHHhcCCC--CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcEEEecCChHH
Confidence 9999999999997655554 9999999997 999999999999999999999999999999977 99999988766432
Q ss_pred H---Hhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccCh-hhHhccCcEEEEeecCCH-HH----
Q 018158 242 M---QAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPS-FPLIFGKRSVKGSMTGGM-RE---- 309 (360)
Q Consensus 242 ~---~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~-~~~~~~~~~i~~~~~~~~-~~---- 309 (360)
. ... +.++|++|||+|.. .+..++++++++|+++.+|...+ ...++. ..++.+++++.++..... .+
T Consensus 220 ~~~~~~~~~~~~~d~vi~~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~ 298 (354)
T 2j8z_A 220 SEATLKFTKGAGVNLILDCIGGS-YWEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQM 298 (354)
T ss_dssp HHHHHHHTTTSCEEEEEESSCGG-GHHHHHHHEEEEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEECCSTTCCHHHHHH
T ss_pred HHHHHHHhcCCCceEEEECCCch-HHHHHHHhccCCCEEEEEeccCCCccCCChhHHHHhCCCEEEEEEcccccccccHH
Confidence 2 222 45799999999987 68899999999999999998654 345666 677889999999876432 11
Q ss_pred -----HHHHHHHHhcC---CCccce-EEECCccHHHHHHHHHcCCCceeEEEecC
Q 018158 310 -----TQEMMNVCGKY---NITCNI-EVIKPDQINEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 310 -----~~~~~~~l~~~---~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
++++++++.+| ++++.+ ++|+++++++|++.+.+++..||+|+++.
T Consensus 299 ~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 353 (354)
T 2j8z_A 299 LVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELP 353 (354)
T ss_dssp HHHHHHHHTGGGGTC---CCCCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCccccCccceEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence 23577888999 888877 89999999999999999888899999875
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-52 Score=379.56 Aligned_cols=313 Identities=17% Similarity=0.234 Sum_probs=267.2
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC-CCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|||+++..++.+..++++++|.|+|++|||+|||++++||++|++.++|.++. ..+|.++|||++|+|+++| +++|+
T Consensus 1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~G--v~~~~ 78 (324)
T 3nx4_A 1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASE--DPRFH 78 (324)
T ss_dssp CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEES--STTCC
T ss_pred CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEeC--CCCCC
Confidence 67777777776667999999999999999999999999999999999997753 5789999999999999998 57899
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||||++.+.. .+...+|+|+||+.+|+++++++|+++++++||++++.+.
T Consensus 79 vGdrV~~~~~~-----------------------------~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 129 (324)
T 3nx4_A 79 AGQEVLLTGWG-----------------------------VGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGF 129 (324)
T ss_dssp TTCEEEEECTT-----------------------------BTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHH
T ss_pred CCCEEEEcccc-----------------------------cCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHH
Confidence 99999863210 1224679999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCc-EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhc-
Q 018158 169 TVFCPMKDNNLIDSPAKK-RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAG- 245 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~-~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~- 245 (360)
|||++++.+.+..+++++ +|||+|+ |++|++++|+||.+|++|+++++++++++.+++ +|+++++|+++.+..+..
T Consensus 130 ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~vi~~~~~~~~~~~~ 208 (324)
T 3nx4_A 130 TAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS-LGANRILSRDEFAESRPLE 208 (324)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-HTCSEEEEGGGSSCCCSSC
T ss_pred HHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCCEEEecCCHHHHHhhc
Confidence 999988654333244533 4999999 999999999999999999999999999999999 999999998775432222
Q ss_pred CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-cccChhhHhccCcEEEEeecCC------HHHHHHHHHHHh
Q 018158 246 KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-FELPSFPLIFGKRSVKGSMTGG------MRETQEMMNVCG 318 (360)
Q Consensus 246 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~l~ 318 (360)
..++|++|||+|.. .+..++++++++|+++.+|..... .+++...++.+++++.++.... .+.++.+++++.
T Consensus 209 ~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~ 287 (324)
T 3nx4_A 209 KQLWAGAIDTVGDK-VLAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLP 287 (324)
T ss_dssp CCCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTCSEEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHHSC
T ss_pred CCCccEEEECCCcH-HHHHHHHHHhcCCEEEEEecCCCCCCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHHHHH
Confidence 46899999999987 689999999999999999987653 4566677888999999986532 255788889999
Q ss_pred cCCCccceEEECCccHHHHHHHHHcCCCceeEEEecC
Q 018158 319 KYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 319 ~~~l~~~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
+|++++..++|+++++++|++.+.+++..||+|++++
T Consensus 288 ~g~l~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~~ 324 (324)
T 3nx4_A 288 ESFYAQAATEITLADAPKFADAIINNQVQGRTLVKIK 324 (324)
T ss_dssp HHHHHHHEEEEEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred cCCCCCCceeEeHHHHHHHHHHHHhCCCCceEEEecC
Confidence 9999877789999999999999999999999999874
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-52 Score=382.51 Aligned_cols=311 Identities=15% Similarity=0.156 Sum_probs=261.9
Q ss_pred CCCCcccceeEEe--cc-CCCCCceEEEE---------eCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccc
Q 018158 4 TTPNHTQSVVGWA--AH-DPSGKITPYIF---------KRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPG 70 (360)
Q Consensus 4 ~~~~~~~~~~~~~--~~-~~~~~l~~~~~---------~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G 70 (360)
++|.+ |||.++. .+ ++++.++++++ |.|+|++|||||||++++||++|++.++|.++ ...+|.++|
T Consensus 6 ~~p~~-mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G 84 (349)
T 3pi7_A 6 TIPSE-MKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAG 84 (349)
T ss_dssp CCCSE-EEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTTSBCC
T ss_pred CCchh-heEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCCCCcc
Confidence 46777 7777776 44 56788999888 99999999999999999999999999999775 346899999
Q ss_pred cccceEEEEecCCC-CCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeE
Q 018158 71 HEITGIITKVGSNV-KNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVV 149 (360)
Q Consensus 71 ~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~ 149 (360)
||++|+|+++|++| ++|++||||++.. +...+|+|+||+.+|+++++
T Consensus 85 ~E~~G~V~~vG~~v~~~~~vGdrV~~~~--------------------------------g~~~~G~~aey~~v~~~~~~ 132 (349)
T 3pi7_A 85 FEGVGTIVAGGDEPYAKSLVGKRVAFAT--------------------------------GLSNWGSWAEYAVAEAAACI 132 (349)
T ss_dssp SEEEEEEEEECSSHHHHHHTTCEEEEEC--------------------------------TTSSCCSSBSEEEEEGGGEE
T ss_pred ceEEEEEEEECCCccCCCCCCCEEEEec--------------------------------cCCCCccceeeEeechHHeE
Confidence 99999999999999 9999999998632 11457999999999999999
Q ss_pred ECCCCCCccccccccchhhhhhchhhccCCCCCCCC-cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH
Q 018158 150 HVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAK-KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL 227 (360)
Q Consensus 150 ~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~-~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~ 227 (360)
++|+++++++||++++.+.|||++++... + ++ +++||+|+ |++|++++|+|+.+|++|+++++++++++.+++
T Consensus 133 ~iP~~~~~~~aa~l~~~~~ta~~~~~~~~--~--~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~- 207 (349)
T 3pi7_A 133 PLLDTVRDEDGAAMIVNPLTAIAMFDIVK--Q--EGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKD- 207 (349)
T ss_dssp ECCTTCCC--GGGSSHHHHHHHHHHHHHH--H--HCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHH-
T ss_pred ECCCCCCHHHHhhccccHHHHHHHHHHHh--h--CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-
Confidence 99999999999999999999997776654 3 55 78999866 999999999999999999999999999999998
Q ss_pred cCCCeEeeCccHHHHHhc-----CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccCh-hhHhccCcEEE
Q 018158 228 LGADEFILSTNAMQMQAG-----KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPS-FPLIFGKRSVK 300 (360)
Q Consensus 228 ~g~~~~v~~~~~~~~~~~-----~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~-~~~~~~~~~i~ 300 (360)
+|+++++|+++.+..... ++++|++|||+|... +..++++++++|+++.+|.... ...++. ..++.+++++.
T Consensus 208 ~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~ 286 (349)
T 3pi7_A 208 IGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTGPL-ASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIE 286 (349)
T ss_dssp HTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCHHH-HHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCEEE
T ss_pred cCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCChh-HHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccEEE
Confidence 999999998775333222 468999999999874 5889999999999999997553 455666 77888999999
Q ss_pred EeecCC---------HHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 301 GSMTGG---------MRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 301 ~~~~~~---------~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
++.... .++++++++++++|++++.+ ++|+++++++|++.+. ++..||+|+++
T Consensus 287 g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~-~~~~gKvvl~p 349 (349)
T 3pi7_A 287 GFWLSEWMRQFKERRGPAILEAQKRFSDGRWSTDVTAVVPLAEAIAWVPAEL-TKPNGKVFIRP 349 (349)
T ss_dssp ECCHHHHHHHTHHHHHHHHHHC-CTTTTSSCCC-CCEEEEHHHHHHHHHHHH-TSSSSCEEEEC
T ss_pred EEEehhhhhhCcHHHHHHHHHHHHHHHcCCcccccceEEcHHHHHHHHHHHh-CCCCceEEEeC
Confidence 987643 35677888899999998887 9999999999999554 45669999975
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-50 Score=371.49 Aligned_cols=309 Identities=14% Similarity=0.194 Sum_probs=258.8
Q ss_pred cceeEEeccCCC-CCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC-CCCCCccccccceEEEEecCCCCCC
Q 018158 10 QSVVGWAAHDPS-GKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIITKVGSNVKNF 87 (360)
Q Consensus 10 ~~~~~~~~~~~~-~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~ 87 (360)
||++++..++.+ ..++++++|.|+|++|||+|||++++||++|++.++|.++. ..+|.++|||++|+|+++|++|++|
T Consensus 5 mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v~~~ 84 (340)
T 3gms_A 5 GKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAFVSRE 84 (340)
T ss_dssp EEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEEEEECTTSCGG
T ss_pred cEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEEEEeCCCCCCC
Confidence 777777666554 45999999999999999999999999999999999998753 5789999999999999999999999
Q ss_pred CCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchh
Q 018158 88 KVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAG 167 (360)
Q Consensus 88 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~ 167 (360)
++||||+.. ..+|+|+||+.+|+++++++|+++++++||++++.+
T Consensus 85 ~vGdrV~~~-----------------------------------~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~ 129 (340)
T 3gms_A 85 LIGKRVLPL-----------------------------------RGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINP 129 (340)
T ss_dssp GTTCEEEEC-----------------------------------SSSCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHH
T ss_pred CCCCEEEec-----------------------------------CCCccceeEEEcCHHHeEECCCCCCHHHHhhhcchH
Confidence 999999852 246999999999999999999999999999999999
Q ss_pred hhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHH---
Q 018158 168 ITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQ--- 243 (360)
Q Consensus 168 ~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~--- 243 (360)
.|||+++.....++ +|++|||+|+ |++|++++|+|+.+|++|+++++++++++.+++ +|+++++|+.+.+...
T Consensus 130 ~ta~~~~~~~~~~~--~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lga~~~~~~~~~~~~~~~~ 206 (340)
T 3gms_A 130 LTAWVTCTETLNLQ--RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-LGAAYVIDTSTAPLYETVM 206 (340)
T ss_dssp HHHHHHHHTTSCCC--TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTCSEEEETTTSCHHHHHH
T ss_pred HHHHHHHHHhcccC--CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-CCCcEEEeCCcccHHHHHH
Confidence 99999997666655 9999999999 699999999999999999999999999999998 9999999887653322
Q ss_pred hc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHh-ccCcEEEEeec----------CCHHHH
Q 018158 244 AG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLI-FGKRSVKGSMT----------GGMRET 310 (360)
Q Consensus 244 ~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~i~~~~~----------~~~~~~ 310 (360)
.. +.++|++|||+|... ....+++++++|+++.+|...+ ..++...+. ...+.+..+.. ...+++
T Consensus 207 ~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (340)
T 3gms_A 207 ELTNGIGADAAIDSIGGPD-GNELAFSLRPNGHFLTIGLLSG-IQVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETF 284 (340)
T ss_dssp HHTTTSCEEEEEESSCHHH-HHHHHHTEEEEEEEEECCCTTS-CCCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHH
T ss_pred HHhCCCCCcEEEECCCChh-HHHHHHHhcCCCEEEEEeecCC-CCCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHH
Confidence 22 468999999999875 4666799999999999998653 233333333 23455444322 123578
Q ss_pred HHHHHHHhcCCCcc-ce-EEECCccHHHHHHHHHcCCC-ceeEEEecCCCc
Q 018158 311 QEMMNVCGKYNITC-NI-EVIKPDQINEALDRLARNDV-RYRFVIDIAGGA 358 (360)
Q Consensus 311 ~~~~~~l~~~~l~~-~i-~~~~~~~~~~a~~~~~~~~~-~gkvvi~~~~~~ 358 (360)
+++++++++|++++ .+ ++|+++++++|++.+.+++. .||+++++.++.
T Consensus 285 ~~~~~l~~~g~l~~~~i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~~~~~ 335 (340)
T 3gms_A 285 RHLIRLVENEQLRFMKVHSTYELADVKAAVDVVQSAEKTKGKVFLTSYEGH 335 (340)
T ss_dssp HHHHHHHHTTSSCCCCEEEEEEGGGHHHHHHHHHCTTCCSSEEEEECC---
T ss_pred HHHHHHHHcCCCccccccEEEeHHHHHHHHHHHHhcCCCCCeEEEEEeccc
Confidence 89999999999987 35 89999999999999999984 599999997654
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-50 Score=372.86 Aligned_cols=307 Identities=18% Similarity=0.299 Sum_probs=255.6
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|||.++..++++..+++++.+.|+|++|||+|||++++||++|++.+.|.++ ...+|.++|||++|+|+++|++|++|+
T Consensus 4 mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~ 83 (349)
T 4a27_A 4 MRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYE 83 (349)
T ss_dssp EEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECTTCCSCC
T ss_pred eEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEEEeCCCCCCCC
Confidence 7887777666667899999999999999999999999999999999999874 357899999999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||||++. ..+|+|+||+.+++++++++|++++++++|++++++.
T Consensus 84 ~GdrV~~~-----------------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 128 (349)
T 4a27_A 84 IGDRVMAF-----------------------------------VNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFV 128 (349)
T ss_dssp TTCEEEEE-----------------------------------CSSCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHH
T ss_pred CCCEEEEe-----------------------------------cCCCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHH
Confidence 99999863 2459999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcCCCeEeeCccHHH---HH
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNAMQ---MQ 243 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~ 243 (360)
|||+++.+..+++ +|++|||+|+ |++|++++|+|+.+| ++|++++ ++++++.++ +|++++++ .+.+. ..
T Consensus 129 ta~~~l~~~~~~~--~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga~~~~~-~~~~~~~~~~ 202 (349)
T 4a27_A 129 TAYVMLFEVANLR--EGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSVTHLFD-RNADYVQEVK 202 (349)
T ss_dssp HHHHHHHTTSCCC--TTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGSSEEEE-TTSCHHHHHH
T ss_pred HHHHHHHHhcCCC--CCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCCcEEEc-CCccHHHHHH
Confidence 9999997766655 9999999999 999999999999995 5899888 566666654 89999998 43322 22
Q ss_pred h-cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-----------------cccChhhHhccCcEEEEeecC
Q 018158 244 A-GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-----------------FELPSFPLIFGKRSVKGSMTG 305 (360)
Q Consensus 244 ~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----------------~~~~~~~~~~~~~~i~~~~~~ 305 (360)
. .++++|++|||+|... +..++++++++|+++.+|..... ..++...++.++.++.++...
T Consensus 203 ~~~~~g~Dvv~d~~g~~~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~ 281 (349)
T 4a27_A 203 RISAEGVDIVLDCLCGDN-TGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLL 281 (349)
T ss_dssp HHCTTCEEEEEEECC--------CTTEEEEEEEEEEC-------------------------CHHHHHHHTCEEEEECHH
T ss_pred HhcCCCceEEEECCCchh-HHHHHHHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeeh
Confidence 2 2578999999999875 58999999999999999975311 124555677889999988652
Q ss_pred C-----------HHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEecCCCc
Q 018158 306 G-----------MRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDIAGGA 358 (360)
Q Consensus 306 ~-----------~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~~ 358 (360)
. .++++++++++++|++++.+ ++|+++++++|++.+.+++..||+|++++++.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~~~~ 346 (349)
T 4a27_A 282 NLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKTP 346 (349)
T ss_dssp HHHHTSCCHHHHHHHHHHHHHHHHTTSCCCCEEEEECGGGHHHHHHHHHTTCCSSEEEEETTCCC
T ss_pred heeccccchHHHHHHHHHHHHHHHCCCccccccceECHHHHHHHHHHHHhCCCCceEEEecCCCC
Confidence 1 56789999999999999888 89999999999999999999999999998754
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-50 Score=367.40 Aligned_cols=308 Identities=18% Similarity=0.226 Sum_probs=261.9
Q ss_pred ccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCC
Q 018158 9 TQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 9 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
||||+++..++.+..+++++.|.|+|+++||+|||.+++||++|++.+.|.++...+|.++|||++|+|+++|++|++|+
T Consensus 1 ~Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~ 80 (327)
T 1qor_A 1 MATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIK 80 (327)
T ss_dssp -CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred CcEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCCCceeEEEEEEECCCCCCCC
Confidence 47877776666667899999999999999999999999999999999999775456899999999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||||.. +. ..+|+|+||+.+|++.++++|+++++++||++++++.
T Consensus 81 ~GdrV~~-~g---------------------------------~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ 126 (327)
T 1qor_A 81 AGDRVVY-AQ---------------------------------SALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGL 126 (327)
T ss_dssp TTCEEEE-SC---------------------------------CSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCEEEE-CC---------------------------------CCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHH
Confidence 9999942 10 1249999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH---Hh
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM---QA 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~ 244 (360)
|||+++....+++ +|+++||+|+ |++|++++|+++..|++|+++++++++++.+++ +|++.++++.+.+.. ..
T Consensus 127 ta~~al~~~~~~~--~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~ 203 (327)
T 1qor_A 127 TVYYLLRKTYEIK--PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-AGAWQVINYREEDLVERLKE 203 (327)
T ss_dssp HHHHHHHTTSCCC--TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HTCSEEEETTTSCHHHHHHH
T ss_pred HHHHHHHHhhCCC--CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCEEEECCCccHHHHHHH
Confidence 9999998655554 9999999997 999999999999999999999999999999988 999999887654322 22
Q ss_pred c--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-cccChhhHhcc-CcEEEEeec----CC----HHHHHH
Q 018158 245 G--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-FELPSFPLIFG-KRSVKGSMT----GG----MRETQE 312 (360)
Q Consensus 245 ~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~-~~~i~~~~~----~~----~~~~~~ 312 (360)
. +.++|++||++| ...+..++++++++|+++.+|...+. ..++...++.+ ++.+.+... .. .+.+++
T Consensus 204 ~~~~~~~D~vi~~~g-~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (327)
T 1qor_A 204 ITGGKKVRVVYDSVG-RDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNE 282 (327)
T ss_dssp HTTTCCEEEEEECSC-GGGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHH
T ss_pred HhCCCCceEEEECCc-hHHHHHHHHHhcCCCEEEEEecCCCCCCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHH
Confidence 1 457999999999 55789999999999999999986543 34666667777 788775432 11 345788
Q ss_pred HHHHHhcCCCccce---EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 313 MMNVCGKYNITCNI---EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 313 ~~~~l~~~~l~~~i---~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+++++.+|++++.+ ++|+|+++++|++.+++++..||+|+++
T Consensus 283 ~~~l~~~g~l~~~i~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 327 (327)
T 1qor_A 283 LFSLIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP 327 (327)
T ss_dssp HHHHHHTTSSCCCCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred HHHHHHCCCcccccccCcEEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 99999999998765 5999999999999999988889999874
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-50 Score=371.54 Aligned_cols=321 Identities=15% Similarity=0.113 Sum_probs=255.7
Q ss_pred CCCCCcccceeEEeccCCCCCceEE-EEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEec
Q 018158 3 QTTPNHTQSVVGWAAHDPSGKITPY-IFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVG 81 (360)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG 81 (360)
+++|++ |+++++. ++++++++ ++|.|+|+++||||||++++||++|++++.+. ..+|.++|||++|+|+++|
T Consensus 6 m~~p~~-mkA~v~~---~~~~l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~---~~~p~v~G~e~~G~V~~vG 78 (371)
T 3gqv_A 6 FIPPPQ-QTALTVN---DHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF---ATPWAFLGTDYAGTVVAVG 78 (371)
T ss_dssp CCCCSC-EEEEEEC---TTSCEEEEEEECCCCCCTTSEEEEEEEEECCGGGGC--------CCTTSCCCSEEEEEEEEEC
T ss_pred CCCchh-ceeEEEc---CCCceEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC---CCCCccCccccEEEEEEeC
Confidence 346777 6766653 34789999 99999999999999999999999999988763 3468999999999999999
Q ss_pred CCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccc
Q 018158 82 SNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAA 161 (360)
Q Consensus 82 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa 161 (360)
++|++|++||||+.. |..|..+. ..+|+|+||+.+++++++++|+++++++|+
T Consensus 79 ~~v~~~~~GdrV~~~--------~~~~~~~~-------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa 131 (371)
T 3gqv_A 79 SDVTHIQVGDRVYGA--------QNEMCPRT-------------------PDQGAFSQYTVTRGRVWAKIPKGLSFEQAA 131 (371)
T ss_dssp TTCCSCCTTCEEEEE--------CCTTCTTC-------------------TTCCSSBSEEECCTTCEEECCTTCCHHHHH
T ss_pred CCCCCCCCCCEEEEe--------ccCCCCCC-------------------CCCCcCcCeEEEchhheEECCCCCCHHHHh
Confidence 999999999999752 33333321 356999999999999999999999999999
Q ss_pred cccchhhhhhchhhcc-CCC------CC---CCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC
Q 018158 162 PLLCAGITVFCPMKDN-NLI------DS---PAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA 230 (360)
Q Consensus 162 ~l~~~~~ta~~~l~~~-~~~------~~---~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~ 230 (360)
++++++.|||+++.+. .++ .+ ++|++|||+|+ |++|++++|+|+.+|++|+++. ++++++.+++ +|+
T Consensus 132 ~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~-lGa 209 (371)
T 3gqv_A 132 ALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKS-RGA 209 (371)
T ss_dssp TSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH-TTC
T ss_pred hhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHH-cCC
Confidence 9999999999999665 331 01 49999999999 9999999999999999999997 7889999988 999
Q ss_pred CeEeeCccHHHH---Hhc-CCCcCEEEEcCCCcccHHHHHHHh-ccCCEEEEeCCCCCC------ccc---ChhhHhccC
Q 018158 231 DEFILSTNAMQM---QAG-KRTLDFILDTVSAKHSLGPILELL-KVNGTLSVVGAPEAP------FEL---PSFPLIFGK 296 (360)
Q Consensus 231 ~~~v~~~~~~~~---~~~-~~~~d~vid~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~~------~~~---~~~~~~~~~ 296 (360)
++++|+++.+.. ... +.++|++|||+|....+..+++++ +++|+++.+|..... ... ....++.++
T Consensus 210 ~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~ 289 (371)
T 3gqv_A 210 EEVFDYRAPNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEG 289 (371)
T ss_dssp SEEEETTSTTHHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSC
T ss_pred cEEEECCCchHHHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeecccc
Confidence 999998876432 222 446999999999977789999999 599999999965421 211 123466788
Q ss_pred cEEEEeecC--CHH-------HHHHHHHHHhcCCCccce---EEECCccHHHHHHHHHcCCCce-eEEEecCCCcC
Q 018158 297 RSVKGSMTG--GMR-------ETQEMMNVCGKYNITCNI---EVIKPDQINEALDRLARNDVRY-RFVIDIAGGAR 359 (360)
Q Consensus 297 ~~i~~~~~~--~~~-------~~~~~~~~l~~~~l~~~i---~~~~~~~~~~a~~~~~~~~~~g-kvvi~~~~~~~ 359 (360)
+++.++... ..+ .++++++++++|++++.. +.|+++++++|++.+.+++..| |+|++++++.+
T Consensus 290 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~~~~~ 365 (371)
T 3gqv_A 290 STWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLEGPLE 365 (371)
T ss_dssp BSCSTTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEECCC--
T ss_pred ccccccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEeCCccc
Confidence 888776432 221 235788999999998752 5699999999999999998887 67788776654
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-49 Score=369.72 Aligned_cols=307 Identities=17% Similarity=0.215 Sum_probs=255.0
Q ss_pred cceeEEeccCCC-CCceEEEEeCCCCC--CCeEEEEEeeeecccchhhhhccCCCC-CCCC---------CccccccceE
Q 018158 10 QSVVGWAAHDPS-GKITPYIFKRRENG--VNDVTIKILYCGICHTDIHHVKNDWGI-TMYP---------VVPGHEITGI 76 (360)
Q Consensus 10 ~~~~~~~~~~~~-~~l~~~~~~~p~~~--~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p---------~~~G~e~~G~ 76 (360)
|+++++..++.+ ..++++++|.|+|+ ++||+|||++++||++|+++++|.++. ..+| .++|||++|+
T Consensus 4 mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~~G~ 83 (364)
T 1gu7_A 4 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFE 83 (364)
T ss_dssp EEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCEEE
T ss_pred EEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCceeEEE
Confidence 666665433322 23899999998877 999999999999999999999987642 3456 8899999999
Q ss_pred EEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCC---
Q 018158 77 ITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPE--- 153 (360)
Q Consensus 77 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~--- 153 (360)
|+++|++|++|++||||++.. ...|+|+||+.+++++++++|+
T Consensus 84 V~~vG~~v~~~~vGdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~~P~~~~ 129 (364)
T 1gu7_A 84 VIKVGSNVSSLEAGDWVIPSH----------------------------------VNFGTWRTHALGNDDDFIKLPNPAQ 129 (364)
T ss_dssp EEEECTTCCSCCTTCEEEESS----------------------------------SCCCCSBSEEEEEGGGEEEECCHHH
T ss_pred EEEeCCCCCcCCCCCEEEecC----------------------------------CCCCcchheEecCHHHeEEcCCccc
Confidence 999999999999999998632 1359999999999999999998
Q ss_pred --------CCCccccccccchhhhhhchhhccCCCCCCCC-cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhH---
Q 018158 154 --------NIAMDAAAPLLCAGITVFCPMKDNNLIDSPAK-KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSK--- 220 (360)
Q Consensus 154 --------~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~-~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~--- 220 (360)
++++++||++++++.|||+++.+..+++ +| ++|||+|+ |++|++++|+||.+|++|++++++.++
T Consensus 130 ~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~--~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~ 207 (364)
T 1gu7_A 130 SKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLT--PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDE 207 (364)
T ss_dssp HHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCC--TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHH
T ss_pred cccccccCCCCHHHHhhccccHHHHHHHHHHhhccC--CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHH
Confidence 8999999999999999999998875555 99 99999999 999999999999999999988866543
Q ss_pred -HHHHHHHcCCCeEeeCcc---HH---HHHh----cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccC
Q 018158 221 -EKEAKELLGADEFILSTN---AM---QMQA----GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELP 288 (360)
Q Consensus 221 -~~~~~~~~g~~~~v~~~~---~~---~~~~----~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~ 288 (360)
++.+++ +|+++++++++ .+ ...+ .+.++|++|||+|.... ..++++++++|+++.+|.... ...++
T Consensus 208 ~~~~~~~-lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~ 285 (364)
T 1gu7_A 208 VVASLKE-LGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSS-TGIARKLNNNGLMLTYGGMSFQPVTIP 285 (364)
T ss_dssp HHHHHHH-HTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHH-HHHHHTSCTTCEEEECCCCSSCCEEEC
T ss_pred HHHHHHh-cCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchhH-HHHHHHhccCCEEEEecCCCCCCcccC
Confidence 567776 99999998864 21 2222 24689999999998765 488899999999999997653 45566
Q ss_pred hhhHhccCcEEEEeecCC---------HHHHHHHHHHHhcCCCccce-EEECC---ccHHHHHHHHHcCCCceeEEEec
Q 018158 289 SFPLIFGKRSVKGSMTGG---------MRETQEMMNVCGKYNITCNI-EVIKP---DQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 289 ~~~~~~~~~~i~~~~~~~---------~~~~~~~~~~l~~~~l~~~i-~~~~~---~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
...++.+++++.++.... .++++++++++.+|++++.. .+|++ +++++|++.+.+++..||+|+++
T Consensus 286 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 364 (364)
T 1gu7_A 286 TSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY 364 (364)
T ss_dssp HHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred HHHHhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence 667788999999986532 35689999999999998754 66666 59999999999988889999975
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-49 Score=367.84 Aligned_cols=316 Identities=19% Similarity=0.225 Sum_probs=256.7
Q ss_pred CCCCCCcccceeEEeccCCCCCceE-EEEeCCCC-CCCeEEEEEeeeecccchhhhhccCCC---------------CCC
Q 018158 2 AQTTPNHTQSVVGWAAHDPSGKITP-YIFKRREN-GVNDVTIKILYCGICHTDIHHVKNDWG---------------ITM 64 (360)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~---------------~~~ 64 (360)
|+++|.+ |++.++..++.+..+++ +++|.|++ +++||||||++++||++|++++.|..+ ...
T Consensus 15 ~~~~~~~-mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~ 93 (375)
T 2vn8_A 15 TENLYFQ-SMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEE 93 (375)
T ss_dssp ---CCCC-EEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTT
T ss_pred ccccCcc-ceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCcccccccccccccccccccc
Confidence 6777877 66776666565668999 99999985 999999999999999999999987531 123
Q ss_pred CCCccccccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEee
Q 018158 65 YPVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVAD 144 (360)
Q Consensus 65 ~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~ 144 (360)
+|.++|||++|+|+++|++|++|++||||++.+.. ...|+|+||+.++
T Consensus 94 ~P~v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~--------------------------------~~~G~~aey~~v~ 141 (375)
T 2vn8_A 94 FPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPP--------------------------------WKQGTLSEFVVVS 141 (375)
T ss_dssp CSBCCCCEEEEEEEEECTTCCSCCTTCEEEEECCT--------------------------------TSCCSSBSEEEEE
T ss_pred CCcccceeeeEEEEEeCCCCCCCCCCCEEEEecCC--------------------------------CCCccceeEEEEc
Confidence 78999999999999999999999999999864211 2369999999999
Q ss_pred cceeEECCCCCCccccccccchhhhhhchhhccCC----CCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChh
Q 018158 145 YRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNL----IDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPS 219 (360)
Q Consensus 145 ~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~----~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~ 219 (360)
++.++++|+++++++||++++++.|||+++....+ ++ +|++|||+|+ |++|++++|+|+..|++|++++ +++
T Consensus 142 ~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~--~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~ 218 (375)
T 2vn8_A 142 GNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNC--TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQD 218 (375)
T ss_dssp GGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTC--TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGG
T ss_pred HHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccC--CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChH
Confidence 99999999999999999999999999999976655 55 9999999997 9999999999999999999998 678
Q ss_pred HHHHHHHHcCCCeEeeCccHHHHHhc--CCCcCEEEEcCCCc-ccHHHHHHHhccCCEEEEeCCCCCC-cc---cCh---
Q 018158 220 KEKEAKELLGADEFILSTNAMQMQAG--KRTLDFILDTVSAK-HSLGPILELLKVNGTLSVVGAPEAP-FE---LPS--- 289 (360)
Q Consensus 220 ~~~~~~~~~g~~~~v~~~~~~~~~~~--~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~---~~~--- 289 (360)
+++.+++ +|+++++++.+.+..... ..++|++|||+|.. ..+..++++++++|+++.+|..... .. +..
T Consensus 219 ~~~~~~~-lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~ 297 (375)
T 2vn8_A 219 ASELVRK-LGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGML 297 (375)
T ss_dssp GHHHHHH-TTCSEEEETTSSCHHHHHHTSCCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHH
T ss_pred HHHHHHH-cCCCEEEECCchHHHHHHhhcCCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhh
Confidence 8888887 999999988764332222 36899999999987 4567888999999999999975421 10 000
Q ss_pred ---hhHhc-------cCcEEEEeec-CCHHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 290 ---FPLIF-------GKRSVKGSMT-GGMRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 290 ---~~~~~-------~~~~i~~~~~-~~~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
..++. ++..+.+... ...+.++++++++.+|++++.+ ++|+|+++++|++.+++++..||+|+++
T Consensus 298 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~ 374 (375)
T 2vn8_A 298 QTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV 374 (375)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred eeehhhccccccccccCcceEEEEeCCCHHHHHHHHHHHHCCCcccCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence 01111 4455544332 2456789999999999999887 8999999999999999998889999986
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-49 Score=363.30 Aligned_cols=312 Identities=21% Similarity=0.269 Sum_probs=257.7
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC-CCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|++.++..++++..++++++|.|+|+++||+|||++++||++|++.++|.++. ..+|.++|||++|+|+++ ++++|+
T Consensus 5 mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~~--~v~~~~ 82 (330)
T 1tt7_A 5 FQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSS--NDPRFA 82 (330)
T ss_dssp EEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEEC--SSTTCC
T ss_pred ceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEEEc--CCCCCC
Confidence 77777765555568999999999999999999999999999999999987542 357899999999999996 468899
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||||++.... .|...+|+|+||+.+|+++++++|+++++++||++++++.
T Consensus 83 vGdrV~~~~~~-----------------------------~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ 133 (330)
T 1tt7_A 83 EGDEVIATSYE-----------------------------LGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGF 133 (330)
T ss_dssp TTCEEEEESTT-----------------------------BTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHH
T ss_pred CCCEEEEcccc-----------------------------cCCCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHH
Confidence 99999863210 1223569999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCc-EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH--HHHh
Q 018158 169 TVFCPMKDNNLIDSPAKK-RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM--QMQA 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~-~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~ 244 (360)
|||.++..+.+..+++|+ +|||+|+ |++|++++|+|+.+|++|+++++++++++.+++ +|+++++|+++.+ ....
T Consensus 134 ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~-lGa~~v~~~~~~~~~~~~~ 212 (330)
T 1tt7_A 134 TAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ-LGASEVISREDVYDGTLKA 212 (330)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH-HTCSEEEEHHHHCSSCCCS
T ss_pred HHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCcEEEECCCchHHHHHH
Confidence 999887643222245887 9999999 999999999999999999999999999999988 9999999876532 1111
Q ss_pred c-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeec--CCH----HHHHHHHHH
Q 018158 245 G-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMT--GGM----RETQEMMNV 316 (360)
Q Consensus 245 ~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~--~~~----~~~~~~~~~ 316 (360)
. +.++|++|||+|.. .+..++++++++|+++.+|...+ ...++...++.+++++.++.. ... +.++.++++
T Consensus 213 ~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~ 291 (330)
T 1tt7_A 213 LSKQQWQGAVDPVGGK-QLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSD 291 (330)
T ss_dssp SCCCCEEEEEESCCTH-HHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHTTTT
T ss_pred hhcCCccEEEECCcHH-HHHHHHHhhcCCCEEEEEecCCCCccCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHHHHH
Confidence 1 45799999999985 68999999999999999998654 345666677889999999743 222 234556667
Q ss_pred HhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 317 CGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 317 l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+.++++++.+ ++|+|+++++|++.+++++..||+|+++
T Consensus 292 ~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~ 330 (330)
T 1tt7_A 292 LKPDQLLTIVDREVSLEETPGALKDILQNRIQGRVIVKL 330 (330)
T ss_dssp SCCSCSTTSEEEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred HhcCCcccccceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 7788898887 9999999999999999988889999864
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-48 Score=361.98 Aligned_cols=308 Identities=19% Similarity=0.263 Sum_probs=258.7
Q ss_pred CCCcccceeEEeccCCC--CCceE-EEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEe
Q 018158 5 TPNHTQSVVGWAAHDPS--GKITP-YIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKV 80 (360)
Q Consensus 5 ~~~~~~~~~~~~~~~~~--~~l~~-~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~v 80 (360)
+|.+ ||+.++..++++ ..+++ +++|.|+|+++||+|||.+++||++|+++++|.++ ...+|.++|||++|+|+++
T Consensus 20 ~~~~-MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G~V~~v 98 (362)
T 2c0c_A 20 FQSM-MQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVAL 98 (362)
T ss_dssp HCCE-EEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEEEEEEE
T ss_pred chhh-ceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEEEEEEE
Confidence 3555 777766554432 46889 99999999999999999999999999999999764 2467999999999999999
Q ss_pred cCCCC-CCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccc
Q 018158 81 GSNVK-NFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDA 159 (360)
Q Consensus 81 G~~v~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~ 159 (360)
|++|+ +|++||||++ ...|+|+||+++|+++++++|+. + .+
T Consensus 99 G~~V~~~~~vGdrV~~------------------------------------~~~G~~aey~~v~~~~~~~~P~~-~-~~ 140 (362)
T 2c0c_A 99 GLSASARYTVGQAVAY------------------------------------MAPGSFAEYTVVPASIATPVPSV-K-PE 140 (362)
T ss_dssp CTTGGGTCCTTCEEEE------------------------------------ECSCCSBSEEEEEGGGCEECSSS-C-HH
T ss_pred CCCccCCCCCCCEEEE------------------------------------ccCCcceeEEEEcHHHeEECCCC-c-hH
Confidence 99999 9999999986 23599999999999999999996 3 46
Q ss_pred cccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCcc
Q 018158 160 AAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN 238 (360)
Q Consensus 160 aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~ 238 (360)
++++++.+.|||+++.+..+++ +|++|||+|+ |++|++++|+|+..|++|+++++++++++.+++ +|+++++++.+
T Consensus 141 aaal~~~~~ta~~al~~~~~~~--~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~Ga~~~~~~~~ 217 (362)
T 2c0c_A 141 YLTLLVSGTTAYISLKELGGLS--EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-LGCDRPINYKT 217 (362)
T ss_dssp HHTTTTHHHHHHHHHHHHTCCC--TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCSEEEETTT
T ss_pred hhcccchHHHHHHHHHHhcCCC--CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-cCCcEEEecCC
Confidence 7788999999999998766655 9999999997 999999999999999999999999999999998 99999998765
Q ss_pred HHH---HHh-cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCc-----------ccChhhHhccCcEEEEee
Q 018158 239 AMQ---MQA-GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPF-----------ELPSFPLIFGKRSVKGSM 303 (360)
Q Consensus 239 ~~~---~~~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-----------~~~~~~~~~~~~~i~~~~ 303 (360)
.+. ... .+.++|++|||+|.. .+..++++++++|+++.+|...... .+ ...++.+++++.++.
T Consensus 218 ~~~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~g~~ 295 (362)
T 2c0c_A 218 EPVGTVLKQEYPEGVDVVYESVGGA-MFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTL-PAKLLKKSASVQGFF 295 (362)
T ss_dssp SCHHHHHHHHCTTCEEEEEECSCTH-HHHHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTH-HHHHHHHTCEEEECC
T ss_pred hhHHHHHHHhcCCCCCEEEECCCHH-HHHHHHHHHhcCCEEEEEeCCCCcCccccccccccccc-HHHHHhhcceEEEEE
Confidence 422 222 246899999999984 6899999999999999999754211 11 245678899999986
Q ss_pred cCC-----HHHHHHHHHHHhcCCCccce---------EEECCccHHHHHHHHHcCCCceeEEEecCC
Q 018158 304 TGG-----MRETQEMMNVCGKYNITCNI---------EVIKPDQINEALDRLARNDVRYRFVIDIAG 356 (360)
Q Consensus 304 ~~~-----~~~~~~~~~~l~~~~l~~~i---------~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~ 356 (360)
... .++++++++++++|++++.+ +.|+++++++|++.+++++..||+|+++.+
T Consensus 296 ~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~ 362 (362)
T 2c0c_A 296 LNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELPH 362 (362)
T ss_dssp GGGCGGGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECCC
T ss_pred hhhhhhhHHHHHHHHHHHHHCCCeEeeeccccccccccccCHHHHHHHHHHHHcCCCCceEEEEcCC
Confidence 532 45789999999999998754 357999999999999998888999998753
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-49 Score=358.67 Aligned_cols=312 Identities=20% Similarity=0.295 Sum_probs=254.8
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
||+.++..++++..++++++|.|+|+++||+|||++++||++|++.+.|.++ ...+|.++|||++|+|+++ ++++|+
T Consensus 4 mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~--~v~~~~ 81 (328)
T 1xa0_A 4 FQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSS--QHPRFR 81 (328)
T ss_dssp EEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEEC--CSSSCC
T ss_pred ceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEEec--CCCCCC
Confidence 7777776655555799999999999999999999999999999999988653 2357899999999999995 568899
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||||++.... .|....|+|+||+.+|+++++++|+++++++|+++++++.
T Consensus 82 vGdrV~~~~~~-----------------------------~g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ 132 (328)
T 1xa0_A 82 EGDEVIATGYE-----------------------------IGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGF 132 (328)
T ss_dssp TTCEEEEESTT-----------------------------BTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHH
T ss_pred CCCEEEEcccc-----------------------------CCCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHH
Confidence 99999863210 1123569999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCc-EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH--HHHh
Q 018158 169 TVFCPMKDNNLIDSPAKK-RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM--QMQA 244 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~-~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~ 244 (360)
|||.++..+.+..+++|+ +|||+|+ |++|++++|+|+.+|++|+++++++++++.+++ +|+++++|+.+.+ ....
T Consensus 133 ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~-lGa~~~i~~~~~~~~~~~~ 211 (328)
T 1xa0_A 133 TAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-LGAKEVLAREDVMAERIRP 211 (328)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-TTCSEEEECC---------
T ss_pred HHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCcEEEecCCcHHHHHHH
Confidence 999887643222245887 9999999 999999999999999999999999999999988 9999999887642 1222
Q ss_pred c-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeec--CCH----HHHHHHHHH
Q 018158 245 G-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMT--GGM----RETQEMMNV 316 (360)
Q Consensus 245 ~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~--~~~----~~~~~~~~~ 316 (360)
. +.++|++||++|.. .+..++++++++|+++.+|...+ ...++...++.+++++.++.. ... +.++.++++
T Consensus 212 ~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~ 290 (328)
T 1xa0_A 212 LDKQRWAAAVDPVGGR-TLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGD 290 (328)
T ss_dssp CCSCCEEEEEECSTTT-THHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHHTT
T ss_pred hcCCcccEEEECCcHH-HHHHHHHhhccCCEEEEEeecCCCCCCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHHHH
Confidence 2 45799999999985 68999999999999999998654 345566677889999999743 222 334566666
Q ss_pred HhcCCCccceEEECCccHHHHHHHHHcCCCceeEEEecC
Q 018158 317 CGKYNITCNIEVIKPDQINEALDRLARNDVRYRFVIDIA 355 (360)
Q Consensus 317 l~~~~l~~~i~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 355 (360)
+.++ +++.+++|+++++++|++.+++++..||+|++++
T Consensus 291 ~~~g-l~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 328 (328)
T 1xa0_A 291 LKPD-LERIAQEISLAELPQALKRILRGELRGRTVVRLA 328 (328)
T ss_dssp TCCC-HHHHEEEEEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred HHcC-CceeeeEeCHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence 6677 7665699999999999999999888899999863
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-48 Score=354.50 Aligned_cols=303 Identities=17% Similarity=0.149 Sum_probs=258.3
Q ss_pred cccceeEEecc----CCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccc----cceEEEE
Q 018158 8 HTQSVVGWAAH----DPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHE----ITGIITK 79 (360)
Q Consensus 8 ~~~~~~~~~~~----~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e----~~G~V~~ 79 (360)
.||++.++..+ .+++.++++++|.|+|++|||||||++++||++|++.+.+.. ...+|.++||| ++|+|++
T Consensus 6 ~~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~-~~~~p~~~G~e~g~~~~G~V~~ 84 (336)
T 4b7c_A 6 QINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDAR-SYIPPVGIGEVMRALGVGKVLV 84 (336)
T ss_dssp CEEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSC-CSSCCCCTTSBCCCEEEEEEEE
T ss_pred ccccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhccc-ccCCCCCCCcccCCceEEEEEe
Confidence 45787777542 256899999999999999999999999999999998887643 33457777777 7999999
Q ss_pred ecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccc
Q 018158 80 VGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDA 159 (360)
Q Consensus 80 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~ 159 (360)
. ++++|++||||++ .|+|+||+.+|+++++++|+++++.+
T Consensus 85 ~--~v~~~~vGdrV~~--------------------------------------~G~~aey~~v~~~~~~~~P~~~~~~~ 124 (336)
T 4b7c_A 85 S--KHPGFQAGDYVNG--------------------------------------ALGVQDYFIGEPKGFYKVDPSRAPLP 124 (336)
T ss_dssp E--CSTTCCTTCEEEE--------------------------------------ECCSBSEEEECCTTCEEECTTTSCGG
T ss_pred c--CCCCCCCCCEEec--------------------------------------cCCceEEEEechHHeEEcCCCCCchH
Confidence 4 5889999999974 38999999999999999999998877
Q ss_pred c--ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeC
Q 018158 160 A--APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILS 236 (360)
Q Consensus 160 a--a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~ 236 (360)
+ +++++++.|||+++.+..+++ +|++|||+|+ |++|++++|+++..|++|+++++++++++.+.+++|+++++|+
T Consensus 125 ~a~a~l~~~~~tA~~al~~~~~~~--~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~ 202 (336)
T 4b7c_A 125 RYLSALGMTGMTAYFALLDVGQPK--NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDY 202 (336)
T ss_dssp GGGTTTSHHHHHHHHHHHHTTCCC--TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEET
T ss_pred HHhhhcccHHHHHHHHHHHhcCCC--CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEEC
Confidence 6 789999999999996666655 9999999999 9999999999999999999999999999999333999999988
Q ss_pred ccHHHHHh----cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC----C---cccChhhHhccCcEEEEeecC
Q 018158 237 TNAMQMQA----GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA----P---FELPSFPLIFGKRSVKGSMTG 305 (360)
Q Consensus 237 ~~~~~~~~----~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~----~---~~~~~~~~~~~~~~i~~~~~~ 305 (360)
.+.+.... .++++|++||++|.. .+..++++++++|+++.+|.... . ..++...++.+++++.++...
T Consensus 203 ~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 281 (336)
T 4b7c_A 203 KNEDLAAGLKRECPKGIDVFFDNVGGE-ILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVM 281 (336)
T ss_dssp TTSCHHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGG
T ss_pred CCHHHHHHHHHhcCCCceEEEECCCcc-hHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhh
Confidence 76532221 256899999999975 68999999999999999997651 1 345566788899999998875
Q ss_pred CH-----HHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 306 GM-----RETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 306 ~~-----~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
.. ++++++++++++|++++.+ .+|+++++++|++.+.+++..||+|+++
T Consensus 282 ~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~ 336 (336)
T 4b7c_A 282 DYAQRFPEGLKEMATWLAEGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV 336 (336)
T ss_dssp GGGGGHHHHHHHHHHHHHTTSSCCCEEEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred hhhhhhHHHHHHHHHHHHCCCcccceeeecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence 53 6789999999999999887 6799999999999999999999999975
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=348.53 Aligned_cols=311 Identities=14% Similarity=0.115 Sum_probs=257.2
Q ss_pred CCCCcccceeEE-ecc---CCC--CCceEEEEeCCCC-CCCeEEEEEeeeecccchhhhhcc----CCC-CCCCCCcccc
Q 018158 4 TTPNHTQSVVGW-AAH---DPS--GKITPYIFKRREN-GVNDVTIKILYCGICHTDIHHVKN----DWG-ITMYPVVPGH 71 (360)
Q Consensus 4 ~~~~~~~~~~~~-~~~---~~~--~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g----~~~-~~~~p~~~G~ 71 (360)
++|.+ |+++++ ... +.+ +.++++++|.|+| ++|||||||++++||++|++.+.+ .+. +..+|.++||
T Consensus 4 ~~~~~-mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~ 82 (357)
T 2zb4_A 4 AAAMI-VQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDG 82 (357)
T ss_dssp --CCE-EEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEE
T ss_pred ccccc-ceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCccccc
Confidence 45666 666666 333 333 6799999999999 999999999999999999987775 232 3457889999
Q ss_pred ccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEEC
Q 018158 72 EITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV 151 (360)
Q Consensus 72 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~i 151 (360)
|++|+|++ ++|++|++||||++ ..|+|+||+++++++++++
T Consensus 83 E~~G~V~~--~~v~~~~vGdrV~~-------------------------------------~~G~~aey~~v~~~~~~~i 123 (357)
T 2zb4_A 83 GGIGIIEE--SKHTNLTKGDFVTS-------------------------------------FYWPWQTKVILDGNSLEKV 123 (357)
T ss_dssp EEEEEEEE--ECSTTCCTTCEEEE-------------------------------------EEEESBSEEEEEGGGCEEC
T ss_pred cEEEEEEe--cCCCCCCCCCEEEe-------------------------------------cCCCcEEEEEEchHHceec
Confidence 99999999 88999999999985 2389999999999999999
Q ss_pred CCCC-----CccccccccchhhhhhchhhccCCCCCCCC--cEEEEEcC-ChHHHHHHHHHHHcCC-eEEEEeCChhHHH
Q 018158 152 PENI-----AMDAAAPLLCAGITVFCPMKDNNLIDSPAK--KRIGIVGL-GGLGHVAVKFGKAFGH-HVTVISTSPSKEK 222 (360)
Q Consensus 152 P~~~-----~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~--~~vlI~Ga-g~vG~~aiqla~~~G~-~V~~~~~~~~~~~ 222 (360)
|+++ +++ ++++++++.|||+++....+++ +| ++|||+|+ |++|++++|+++..|+ +|+++++++++++
T Consensus 124 P~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~--~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~ 200 (357)
T 2zb4_A 124 DPQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHIT--AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCI 200 (357)
T ss_dssp CGGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCC--TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHH
T ss_pred CcccccCchhHH-HHhcccHHHHHHHHHHHhcCCC--CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHH
Confidence 9999 555 7889999999999996555544 99 99999999 9999999999999999 9999999999988
Q ss_pred HHHHHcCCCeEeeCccHHH---HHhc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC---CcccC-------
Q 018158 223 EAKELLGADEFILSTNAMQ---MQAG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA---PFELP------- 288 (360)
Q Consensus 223 ~~~~~~g~~~~v~~~~~~~---~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~~~------- 288 (360)
.+++.+|+++++|+.+.+. .... ..++|++||++|. ..+..++++++++|+++.+|.... .++.+
T Consensus 201 ~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~d~vi~~~G~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~ 279 (357)
T 2zb4_A 201 LLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGG-NISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAI 279 (357)
T ss_dssp HHHHTSCCSEEEETTTSCHHHHHHHHCTTCEEEEEESCCH-HHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHH
T ss_pred HHHHHcCCceEEecCchHHHHHHHHhcCCCCCEEEECCCH-HHHHHHHHHhccCcEEEEECCccccccCccccccchhhh
Confidence 8876699999988765422 2222 2389999999997 468999999999999999997542 22221
Q ss_pred hhhHhccCcEEEEeecCC-----HHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEecCCCc
Q 018158 289 SFPLIFGKRSVKGSMTGG-----MRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDIAGGA 358 (360)
Q Consensus 289 ~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~~ 358 (360)
...++.+++++.++.... .++++++++++.+|++++.+ .+|+|+++++|++.+.+++..||+|++++++.
T Consensus 280 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~~ 355 (357)
T 2zb4_A 280 EAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEEI 355 (357)
T ss_dssp HHHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEECCCCC
T ss_pred hhhhhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcCccceecCHHHHHHHHHHHHcCCCCceEEEEEeccc
Confidence 145678899999986543 56689999999999998876 78999999999999999988899999997653
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-48 Score=359.97 Aligned_cols=303 Identities=13% Similarity=0.081 Sum_probs=249.4
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC----------------------------
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG---------------------------- 61 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---------------------------- 61 (360)
|++++ ...++..++++++|.|+|++|||||||++++||++|++.++|.++
T Consensus 8 mka~v--~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~~~ 85 (379)
T 3iup_A 8 LRSRI--KSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSMA 85 (379)
T ss_dssp EEEEE--CTTSEEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHHHG
T ss_pred HHHHH--hcCCCCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCccccccccc
Confidence 55443 334556899999999999999999999999999999999988521
Q ss_pred -CCCCCCccccccceEEEEecCCC-CCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceee
Q 018158 62 -ITMYPVVPGHEITGIITKVGSNV-KNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSE 139 (360)
Q Consensus 62 -~~~~p~~~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~ 139 (360)
...+|.++|||++|+|+++|++| ++|++||||++ ..+|+|+|
T Consensus 86 ~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~------------------------------------~~~G~~ae 129 (379)
T 3iup_A 86 GRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAA------------------------------------IGGAMYSQ 129 (379)
T ss_dssp GGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEE------------------------------------CCSCCSBS
T ss_pred cccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEe------------------------------------cCCCccee
Confidence 23468899999999999999999 89999999986 34599999
Q ss_pred EEEeecceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEc--CChHHHHHHHHHHHcCCeEEEEeCC
Q 018158 140 MLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVG--LGGLGHVAVKFGKAFGHHVTVISTS 217 (360)
Q Consensus 140 ~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~G--ag~vG~~aiqla~~~G~~V~~~~~~ 217 (360)
|+++|+++++++|+++++++|+++++.+.|||++++... + +|++|||+| +|++|++++|+|+.+|++|++++++
T Consensus 130 y~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~--~--~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~ 205 (379)
T 3iup_A 130 YRCIPADQCLVLPEGATPADGASSFVNPLTALGMVETMR--L--EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRK 205 (379)
T ss_dssp EEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHHHHHH--H--TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESS
T ss_pred EEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhc--c--CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 999999999999999999999999999999998887654 4 899999994 4999999999999999999999999
Q ss_pred hhHHHHHHHHcCCCeEeeCccHHHHHh---c--CCCcCEEEEcCCCcccHHHHHHHhc-----cC-----------CEEE
Q 018158 218 PSKEKEAKELLGADEFILSTNAMQMQA---G--KRTLDFILDTVSAKHSLGPILELLK-----VN-----------GTLS 276 (360)
Q Consensus 218 ~~~~~~~~~~~g~~~~v~~~~~~~~~~---~--~~~~d~vid~~g~~~~~~~~~~~l~-----~~-----------G~~v 276 (360)
+++++.+++ +|+++++|+++.+.... . ++++|++|||+|....+..++++++ ++ |+++
T Consensus 206 ~~~~~~~~~-lGa~~~~~~~~~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv 284 (379)
T 3iup_A 206 QEQADLLKA-QGAVHVCNAASPTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVY 284 (379)
T ss_dssp HHHHHHHHH-TTCSCEEETTSTTHHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEE
T ss_pred HHHHHHHHh-CCCcEEEeCCChHHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEE
Confidence 999999999 99999999887643322 2 4689999999998777788888885 44 5565
Q ss_pred EeCCCCCCcccChhhHhccCcEEEEeecCC------HHH----HHHHHHHHhcCCCccce-EEECCccH--HHHHHHHHc
Q 018158 277 VVGAPEAPFELPSFPLIFGKRSVKGSMTGG------MRE----TQEMMNVCGKYNITCNI-EVIKPDQI--NEALDRLAR 343 (360)
Q Consensus 277 ~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~----~~~~~~~l~~~~l~~~i-~~~~~~~~--~~a~~~~~~ 343 (360)
.+|... ....+...++.+++++.++.... .++ ++.+++++.+ .+++.+ ++|+|+++ ++|++.+.+
T Consensus 285 ~~G~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~~~~l~~~~~~~A~~~l~~ 362 (379)
T 3iup_A 285 LYGGLD-TSPTEFNRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-TFASHYSKEISLAEVLDLDMIAVYNK 362 (379)
T ss_dssp ECCCSE-EEEEEECCCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TTCCCCSEEEEHHHHTCHHHHHHHTT
T ss_pred EecCCC-CCccccccccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-cCCCcceEEecHHHhhhHHHHHHHhc
Confidence 555533 12233345567889999876532 223 3556666666 577777 99999999 999999999
Q ss_pred CCCceeEEEecCCC
Q 018158 344 NDVRYRFVIDIAGG 357 (360)
Q Consensus 344 ~~~~gkvvi~~~~~ 357 (360)
++..||+|++++..
T Consensus 363 ~~~~gKvVv~~~~g 376 (379)
T 3iup_A 363 RATGEKYLINPNKG 376 (379)
T ss_dssp CCTTCCEEEETTTT
T ss_pred CCCCceEEEeCCCC
Confidence 99999999998754
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=340.60 Aligned_cols=290 Identities=20% Similarity=0.266 Sum_probs=245.4
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC-CCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|++.++...+ ....+++.|.|+|+++||+|||++++||++|++++.|.++. ..+|.++|||++|+|+
T Consensus 1 Mka~~~~~~g--~~~~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~---------- 68 (302)
T 1iz0_A 1 MKAWVLKRLG--GPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE---------- 68 (302)
T ss_dssp CEEEEECSTT--SCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET----------
T ss_pred CeEEEEcCCC--CchheEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE----------
Confidence 4555553333 33346689999999999999999999999999999987643 3678999999999997
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
||||++. ..+|+|+||+.++++.++++|++++++++|++++++.
T Consensus 69 -GdrV~~~-----------------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 112 (302)
T 1iz0_A 69 -GRRYAAL-----------------------------------VPQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFL 112 (302)
T ss_dssp -TEEEEEE-----------------------------------CSSCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHH
T ss_pred -CcEEEEe-----------------------------------cCCcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHH
Confidence 9999863 2359999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCcc-HHHHHhcC
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN-AMQMQAGK 246 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~-~~~~~~~~ 246 (360)
|||+++.... ++ +|++|+|+|+ |++|++++|+|+.+|++|+++++++++++.+++ +|+++++++.+ .+.....
T Consensus 113 ta~~~l~~~~-~~--~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~ga~~~~~~~~~~~~~~~~- 187 (302)
T 1iz0_A 113 TAYLALKRAQ-AR--PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-LGAEEAATYAEVPERAKAW- 187 (302)
T ss_dssp HHHHHHHHTT-CC--TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-TTCSEEEEGGGHHHHHHHT-
T ss_pred HHHHHHHHhc-CC--CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cCCCEEEECCcchhHHHHh-
Confidence 9999998666 55 9999999999 999999999999999999999999999999988 99999999876 4433333
Q ss_pred CCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-cccChhhHhccCcEEEEeecC----CHHHHHHHHH---HHh
Q 018158 247 RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-FELPSFPLIFGKRSVKGSMTG----GMRETQEMMN---VCG 318 (360)
Q Consensus 247 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~---~l~ 318 (360)
+++|++|| +|. ..+..++++++++|+++.+|..... ..++...++.+++++.++... ..++++++++ ++.
T Consensus 188 ~~~d~vid-~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~ 265 (302)
T 1iz0_A 188 GGLDLVLE-VRG-KEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRL 265 (302)
T ss_dssp TSEEEEEE-CSC-TTHHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHHHTTCHHHHHHHHHHHGGGB
T ss_pred cCceEEEE-CCH-HHHHHHHHhhccCCEEEEEeCCCCCCCCcCHHHHHhCCCeEEEEeccchhhhHHHHHHHHhhhHHHH
Confidence 78999999 988 4789999999999999999986543 245666678899999998753 4677899999 999
Q ss_pred cCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 319 KYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 319 ~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
+|++++.+ ++|+++++++|++.+.+++..||+++++
T Consensus 266 ~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 302 (302)
T 1iz0_A 266 GRELRPVVGPVFPFAEAEAAFRALLDRGHTGKVVVRL 302 (302)
T ss_dssp TTTBCCCEEEEEEGGGHHHHHHHTTCTTCCBEEEEEC
T ss_pred cCCcccccceEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 99999887 8999999999999999988889999874
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-44 Score=331.10 Aligned_cols=307 Identities=16% Similarity=0.126 Sum_probs=249.8
Q ss_pred CCcccceeEEecc--CCCC--CceEE--EEeCCC-CCCCeEEEEEeeeecccchhhhhccCCCC----CCCCCccccccc
Q 018158 6 PNHTQSVVGWAAH--DPSG--KITPY--IFKRRE-NGVNDVTIKILYCGICHTDIHHVKNDWGI----TMYPVVPGHEIT 74 (360)
Q Consensus 6 ~~~~~~~~~~~~~--~~~~--~l~~~--~~~~p~-~~~~evlVkv~~~~i~~~D~~~~~g~~~~----~~~p~~~G~e~~ 74 (360)
|.| |++..+..+ ++++ .++++ +++.|. |++|||||||.++++|+.|. ...|.+.. ..+|.++|||++
T Consensus 2 ~~~-mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~ 79 (345)
T 2j3h_A 2 TAT-NKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQ 79 (345)
T ss_dssp EEE-EEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCE
T ss_pred Ccc-ceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeee
Confidence 445 555544443 5556 69998 889886 89999999999999988875 45554422 246889999999
Q ss_pred eEEEE--ecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecce--eEE
Q 018158 75 GIITK--VGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRF--VVH 150 (360)
Q Consensus 75 G~V~~--vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~--~~~ 150 (360)
|++++ +|+++++|++||||++ .|+|+||+.++++. +++
T Consensus 80 G~~~~GvV~~~v~~~~vGdrV~~--------------------------------------~g~~aey~~v~~~~~~~~~ 121 (345)
T 2j3h_A 80 GYGVSRIIESGHPDYKKGDLLWG--------------------------------------IVAWEEYSVITPMTHAHFK 121 (345)
T ss_dssp EEEEEEEEEECSTTCCTTCEEEE--------------------------------------EEESBSEEEECCCTTTCEE
T ss_pred cceEEEEEecCCCCCCCCCEEEe--------------------------------------ecCceeEEEecccccceee
Confidence 99999 9999999999999974 28899999999876 999
Q ss_pred CCC---CCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHH
Q 018158 151 VPE---NIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKE 226 (360)
Q Consensus 151 iP~---~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~ 226 (360)
+|+ +++++ ++++++++.|||+++.+..+++ +|++|||+|+ |++|++++|+++..|++|+++++++++++.+++
T Consensus 122 ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~--~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~ 198 (345)
T 2j3h_A 122 IQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPK--EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKT 198 (345)
T ss_dssp ECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCC--TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred cCCCCCCHHHH-HHhccccHHHHHHHHHHHhCCC--CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 996 45655 6789999999999996655554 9999999998 999999999999999999999999999999984
Q ss_pred HcCCCeEeeCccH----HHHHhc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC------CcccChhhHhcc
Q 018158 227 LLGADEFILSTNA----MQMQAG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA------PFELPSFPLIFG 295 (360)
Q Consensus 227 ~~g~~~~v~~~~~----~~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~ 295 (360)
++|+++++|+.+. +..... ++++|++||++|.. .+..++++++++|+++.+|.... ...++...++.+
T Consensus 199 ~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~ 277 (345)
T 2j3h_A 199 KFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGK-MLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYK 277 (345)
T ss_dssp TSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHH
T ss_pred HcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECCCHH-HHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhh
Confidence 4999999887642 122222 45799999999984 68999999999999999987542 234555677889
Q ss_pred CcEEEEeecCCH-----HHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEecCC
Q 018158 296 KRSVKGSMTGGM-----RETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDIAG 356 (360)
Q Consensus 296 ~~~i~~~~~~~~-----~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~ 356 (360)
++++.++..... +.++++++++++|++++.+ ++|+|+++++|++.+++++..||+|+++++
T Consensus 278 ~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~ 344 (345)
T 2j3h_A 278 RNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVAR 344 (345)
T ss_dssp TCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEEEESGGGSHHHHHHHHTTCCSSEEEEESSC
T ss_pred ceeeceeeehhhhhhHHHHHHHHHHHHHCCCCcCcccccCCHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence 999998765432 3388899999999999877 589999999999999999989999999864
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=363.69 Aligned_cols=296 Identities=17% Similarity=0.190 Sum_probs=249.5
Q ss_pred EeccCCCCCceEEEEeC--CCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCE
Q 018158 15 WAAHDPSGKITPYIFKR--RENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDR 92 (360)
Q Consensus 15 ~~~~~~~~~l~~~~~~~--p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 92 (360)
....+....+++++.+. |+|++|||+|||++++||++|++++.|.++ .|.++|||++|+|+++|++|++|++|||
T Consensus 215 ~~~~G~~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~---~~~~lG~E~aG~V~~vG~~V~~~~vGDr 291 (795)
T 3slk_A 215 ATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP---GVASLGSEGAGVVVETGPGVTGLAPGDR 291 (795)
T ss_dssp ESSTTSSTTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCS---SCCCSCCCEEEEEEEECSSCCSSCTTCE
T ss_pred cCCCCCccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCC---CCccccceeEEEEEEeCCCCCcCCCCCE
Confidence 33456677899988774 578999999999999999999999999763 4567999999999999999999999999
Q ss_pred EEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhc
Q 018158 93 AAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFC 172 (360)
Q Consensus 93 V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~ 172 (360)
|++ ...|+|++|++++.++++++|+++++++||++++.+.|||+
T Consensus 292 V~~------------------------------------~~~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~ 335 (795)
T 3slk_A 292 VMG------------------------------------MIPKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYY 335 (795)
T ss_dssp EEE------------------------------------CCSSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHC
T ss_pred EEE------------------------------------EecCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHH
Confidence 986 34599999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHh-----cC
Q 018158 173 PMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQA-----GK 246 (360)
Q Consensus 173 ~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~-----~~ 246 (360)
++....+++ +|++|||+|+ |++|++++|+||.+|++|+++++++ +++.+ + +|+++++++.+.+.... .+
T Consensus 336 al~~~a~l~--~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l-~-lga~~v~~~~~~~~~~~i~~~t~g 410 (795)
T 3slk_A 336 ALVDLAGLR--PGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAV-E-LSREHLASSRTCDFEQQFLGATGG 410 (795)
T ss_dssp CCCCCTCCC--TTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGS-C-SCGGGEECSSSSTHHHHHHHHSCS
T ss_pred HHHHHhCCC--CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhh-h-cChhheeecCChhHHHHHHHHcCC
Confidence 998877766 9999999998 9999999999999999999999665 54444 3 89999999877643322 26
Q ss_pred CCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCC------HHHHHHHHHHHhcC
Q 018158 247 RTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGG------MRETQEMMNVCGKY 320 (360)
Q Consensus 247 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~l~~~ 320 (360)
+++|+|||++|+. .+..++++++++|+++.+|.......... ....+++++.+..... .+.++++++++++|
T Consensus 411 ~GvDvVld~~gg~-~~~~~l~~l~~~Gr~v~iG~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g 488 (795)
T 3slk_A 411 RGVDVVLNSLAGE-FADASLRMLPRGGRFLELGKTDVRDPVEV-ADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGR 488 (795)
T ss_dssp SCCSEEEECCCTT-TTHHHHTSCTTCEEEEECCSTTCCCHHHH-HHHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTT
T ss_pred CCeEEEEECCCcH-HHHHHHHHhcCCCEEEEeccccccCcccc-cccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcC
Confidence 7899999999886 57999999999999999997653322222 2234667776654421 25678899999999
Q ss_pred CCccce-EEECCccHHHHHHHHHcCCCceeEEEecCC
Q 018158 321 NITCNI-EVIKPDQINEALDRLARNDVRYRFVIDIAG 356 (360)
Q Consensus 321 ~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~ 356 (360)
++++.+ ++|+++++++||+.+++++..||+|+++..
T Consensus 489 ~l~p~~~~~~~l~~~~eA~~~l~~g~~~GKvVl~~~~ 525 (795)
T 3slk_A 489 VLEPLPVTAWDVRQAPEALRHLSQARHVGKLVLTMPP 525 (795)
T ss_dssp SCCCCCEEEEEGGGHHHHHHHHHHTCCCBEEEEECCC
T ss_pred CcCCCcceeEcHHHHHHHHHHHhcCCccceEEEecCc
Confidence 998866 999999999999999999999999999864
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-43 Score=321.80 Aligned_cols=297 Identities=12% Similarity=0.114 Sum_probs=243.5
Q ss_pred cceeEEecc--CC--CCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCC
Q 018158 10 QSVVGWAAH--DP--SGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVK 85 (360)
Q Consensus 10 ~~~~~~~~~--~~--~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~ 85 (360)
|+++++..+ ++ ++.++++++|.|+|++|||||||++++||+.|..+ . .+..+|.++|||++|+|++. +++
T Consensus 8 mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~---~~~~~p~~~g~e~~G~Vv~~--~v~ 81 (333)
T 1v3u_A 8 AKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIA-S---KRLKEGAVMMGQQVARVVES--KNS 81 (333)
T ss_dssp EEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHH-T---TTCCTTSBCCCCEEEEEEEE--SCT
T ss_pred ccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHccc-c---CcCCCCcccccceEEEEEec--CCC
Confidence 455555443 22 36799999999999999999999999999998732 1 13456788999999999995 578
Q ss_pred CCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCC----CCccc-c
Q 018158 86 NFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPEN----IAMDA-A 160 (360)
Q Consensus 86 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~----~~~~~-a 160 (360)
+|++||||++ .|+|+||+.++.++++++|++ +++++ +
T Consensus 82 ~~~vGdrV~~--------------------------------------~g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~ 123 (333)
T 1v3u_A 82 AFPAGSIVLA--------------------------------------QSGWTTHFISDGKGLEKLLTEWPDKLPLSLAL 123 (333)
T ss_dssp TSCTTCEEEE--------------------------------------CCCSBSEEEESSTTEEECC--CCTTSCGGGGG
T ss_pred CCCCCCEEEe--------------------------------------cCceEEEEEechHHeEEcCcccccCCCHHHHH
Confidence 9999999974 288999999999999999997 88887 5
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCcc-
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN- 238 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~- 238 (360)
+++++++.|||+++....+++ +|+++||+|+ |++|++++|+++..|++|+++++++++++.+++ +|++.++|..+
T Consensus 124 a~l~~~~~ta~~al~~~~~~~--~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~-~g~~~~~d~~~~ 200 (333)
T 1v3u_A 124 GTIGMPGLTAYFGLLEVCGVK--GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ-IGFDAAFNYKTV 200 (333)
T ss_dssp TTTSHHHHHHHHHHHTTSCCC--SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCSEEEETTSC
T ss_pred HHhCChHHHHHHHHHHhhCCC--CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cCCcEEEecCCH
Confidence 899999999999996655544 9999999999 999999999999999999999999999999966 99998888765
Q ss_pred HH---HHHhc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC------Cc-ccChhhHhccCcEEEEeecCC-
Q 018158 239 AM---QMQAG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA------PF-ELPSFPLIFGKRSVKGSMTGG- 306 (360)
Q Consensus 239 ~~---~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~-~~~~~~~~~~~~~i~~~~~~~- 306 (360)
.+ ..... ..++|++||++|.. .+..++++++++|+++.+|.... .. ..+...++.+++++.++....
T Consensus 201 ~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 279 (333)
T 1v3u_A 201 NSLEEALKKASPDGYDCYFDNVGGE-FLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRW 279 (333)
T ss_dssp SCHHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGC
T ss_pred HHHHHHHHHHhCCCCeEEEECCChH-HHHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhc
Confidence 22 22222 35799999999975 57899999999999999997653 11 134556788999999986533
Q ss_pred -----HHHHHHHHHHHhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEec
Q 018158 307 -----MRETQEMMNVCGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDI 354 (360)
Q Consensus 307 -----~~~~~~~~~~l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 354 (360)
.+.++++++++.+|++++.. ..++|+++++|++.+++++..||+|+++
T Consensus 280 ~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 333 (333)
T 1v3u_A 280 QGDVREKALRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVVTA 333 (333)
T ss_dssp CTHHHHHHHHHHHHHHHTTSSCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred chHHHHHHHHHHHHHHHCCCccCccccccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence 35678899999999998876 6789999999999999998889999974
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-33 Score=306.36 Aligned_cols=288 Identities=15% Similarity=0.157 Sum_probs=232.6
Q ss_pred CCceEEEEeCCC-C--CCCeEEEEEeeeecccchhhhhccCCCCC-------CCCCccccccceEEEEecCCCCCCCCCC
Q 018158 22 GKITPYIFKRRE-N--GVNDVTIKILYCGICHTDIHHVKNDWGIT-------MYPVVPGHEITGIITKVGSNVKNFKVGD 91 (360)
Q Consensus 22 ~~l~~~~~~~p~-~--~~~evlVkv~~~~i~~~D~~~~~g~~~~~-------~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 91 (360)
.++.+.+.+... + .++||+|||.++++|+.|+++..|.++.. ..|.++|+|++|+|. +||
T Consensus 1542 ~sl~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V~----------vGd 1611 (2512)
T 2vz8_A 1542 SSIRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDA----------SGR 1611 (2512)
T ss_dssp TSEEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEET----------TSC
T ss_pred CceEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEEc----------cCC
Confidence 356666655433 3 37999999999999999999999876422 235689999999872 799
Q ss_pred EEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhh
Q 018158 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVF 171 (360)
Q Consensus 92 ~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~ 171 (360)
+|++. ...|+|++|+++|++.++++|+++++++||++++.+.|||
T Consensus 1612 rV~g~-----------------------------------~~~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~ 1656 (2512)
T 2vz8_A 1612 RVMGM-----------------------------------VPAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAY 1656 (2512)
T ss_dssp CEEEE-----------------------------------CSSCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHH
T ss_pred EEEEe-----------------------------------ecCCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHH
Confidence 99863 2359999999999999999999999999999999999999
Q ss_pred chhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeEeeCccHHHHHh---
Q 018158 172 CPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEFILSTNAMQMQA--- 244 (360)
Q Consensus 172 ~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~v~~~~~~~~~~--- 244 (360)
+++....+++ +|++|||+|+ |++|++++|+||.+|++|++++.++++++.+++. +|+++++++.+.+....
T Consensus 1657 ~al~~~a~l~--~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~ 1734 (2512)
T 2vz8_A 1657 YSLVVRGRMQ--PGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLR 1734 (2512)
T ss_dssp HHHTTTTCCC--TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHH
T ss_pred HHHHHHhcCC--CCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHH
Confidence 9998777755 9999999988 9999999999999999999999999999999874 57899998877543322
Q ss_pred --cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-cccChhhHhccCcEEEEeecC-----CHHHHHHHHHH
Q 018158 245 --GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-FELPSFPLIFGKRSVKGSMTG-----GMRETQEMMNV 316 (360)
Q Consensus 245 --~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~~ 316 (360)
.++++|+|||+++. ..+..++++++++|+++.+|..... .......++.+++++.++... ..+.++.++++
T Consensus 1735 ~t~g~GvDvVld~~g~-~~l~~~l~~L~~~Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~ 1813 (2512)
T 2vz8_A 1735 HTAGKGVDLVLNSLAE-EKLQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSEL 1813 (2512)
T ss_dssp TTTSCCEEEEEECCCH-HHHHHHHTTEEEEEEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHH
T ss_pred hcCCCCceEEEECCCc-hHHHHHHHhcCCCcEEEEeecccccccCcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHH
Confidence 25689999999975 4689999999999999999864311 111223456788999887542 22445555554
Q ss_pred ----HhcCCCccce-EEECCccHHHHHHHHHcCCCceeEEEecCCC
Q 018158 317 ----CGKYNITCNI-EVIKPDQINEALDRLARNDVRYRFVIDIAGG 357 (360)
Q Consensus 317 ----l~~~~l~~~i-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~ 357 (360)
+.++.+++.+ ++|+++++++|++.+.+++..||+|++++.+
T Consensus 1814 l~~~~~~g~l~p~i~~~f~l~ei~eA~~~l~~g~~~GKvVi~~~~~ 1859 (2512)
T 2vz8_A 1814 LKAGIQEGVVQPLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQVREE 1859 (2512)
T ss_dssp HHHHHTTTCSCCCCEEEEESSTHHHHHHHHHTTCCSSEEEEECSCC
T ss_pred HHHHHHcCCcCCCcceEecHHHHHHHHHhhhccCccceEEEECCCc
Confidence 4567888766 9999999999999999999899999999654
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.9e-21 Score=164.47 Aligned_cols=176 Identities=17% Similarity=0.188 Sum_probs=129.8
Q ss_pred ceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHH
Q 018158 146 RFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEA 224 (360)
Q Consensus 146 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~ 224 (360)
++++++|+++++++|+++++++.|||+++....+++ +|++++|+|+ |++|++++|+++..|++|+++++++++.+.+
T Consensus 2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~--~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~ 79 (198)
T 1pqw_A 2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLS--PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML 79 (198)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHTTSCCC--TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH
T ss_pred CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCC--CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 568899999999999999999999999997665554 9999999997 9999999999999999999999999988888
Q ss_pred HHHcCCCeEeeCccHHHH---Hhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC--CcccChhhHhccCc
Q 018158 225 KELLGADEFILSTNAMQM---QAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA--PFELPSFPLIFGKR 297 (360)
Q Consensus 225 ~~~~g~~~~v~~~~~~~~---~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~ 297 (360)
++ +|++.+++..+.+.. ... +.++|++||++|.. .+..++++++++|+++.+|.... ...++.. .+.+++
T Consensus 80 ~~-~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~ 156 (198)
T 1pqw_A 80 SR-LGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGE-AIQRGVQILAPGGRFIELGKKDVYADASLGLA-ALAKSA 156 (198)
T ss_dssp HT-TCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCTH-HHHHHHHTEEEEEEEEECSCGGGTTTCEEEGG-GGTTTC
T ss_pred HH-cCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCchH-HHHHHHHHhccCCEEEEEcCCCCcCcCcCChh-HhcCCc
Confidence 77 999888877654222 221 35799999999864 67999999999999999997542 2222222 346788
Q ss_pred EEEEeec------CC---HHHHHHHHHHHhcCCCccce
Q 018158 298 SVKGSMT------GG---MRETQEMMNVCGKYNITCNI 326 (360)
Q Consensus 298 ~i~~~~~------~~---~~~~~~~~~~l~~~~l~~~i 326 (360)
++.+... .. .+.++++++++.+|++++.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~ 194 (198)
T 1pqw_A 157 SFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLP 194 (198)
T ss_dssp EEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred EEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCCC
Confidence 8876422 11 35678899999999998754
|
| >2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.18 E-value=1.2e-10 Score=101.18 Aligned_cols=170 Identities=15% Similarity=0.083 Sum_probs=109.2
Q ss_pred CCCCCEEEeccC------ccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCcccc
Q 018158 87 FKVGDRAAVGCL------AAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAA 160 (360)
Q Consensus 87 ~~~Gd~V~~~~~------~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a 160 (360)
+++||+|++.+. ...|+.|.+|..|.++.|+.... ..|+.. +...++.|+.....+.
T Consensus 4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g~-----------~~G~~~------~~~~~~~p~~~~~~~~ 66 (248)
T 2yvl_A 4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGK-----------PEGVKI------NGFEVYRPTLEEIILL 66 (248)
T ss_dssp CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTTC-----------CTTEEE------TTEEEECCCHHHHHHH
T ss_pred CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcCC-----------CCCCEE------EEEEEeCCCHHHHHHh
Confidence 899999998763 45788899999998888875321 113222 2334444432222211
Q ss_pred c-----cccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CC-C
Q 018158 161 A-----PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GA-D 231 (360)
Q Consensus 161 a-----~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~-~ 231 (360)
+ .+.. ...+...+.... ++++++||.+|+| .|..++.+++. +.+|++++.+++..+.+++.+ +. .
T Consensus 67 ~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~vldiG~G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~ 140 (248)
T 2yvl_A 67 GFERKTQIIY-PKDSFYIALKLN---LNKEKRVLEFGTG-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGK 140 (248)
T ss_dssp TSCCSSCCCC-HHHHHHHHHHTT---CCTTCEEEEECCT-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCT
T ss_pred cCcCCCCccc-chhHHHHHHhcC---CCCCCEEEEeCCC-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCC
Confidence 1 1111 122223444433 4589999999998 59999999998 889999999999888887742 32 1
Q ss_pred eE-eeCccHHHHHhcCCCcCEEEEcCCCc-ccHHHHHHHhccCCEEEEeC
Q 018158 232 EF-ILSTNAMQMQAGKRTLDFILDTVSAK-HSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 232 ~~-v~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g 279 (360)
.+ +...+.........++|+|+...+.. ..+..+.+.|+++|+++...
T Consensus 141 ~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 190 (248)
T 2yvl_A 141 NVKFFNVDFKDAEVPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLL 190 (248)
T ss_dssp TEEEECSCTTTSCCCTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEE
T ss_pred cEEEEEcChhhcccCCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence 11 11111111100235799999887765 67899999999999998774
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=99.12 E-value=1.8e-12 Score=120.86 Aligned_cols=184 Identities=16% Similarity=0.151 Sum_probs=127.3
Q ss_pred CccccccceEEEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecc
Q 018158 67 VVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYR 146 (360)
Q Consensus 67 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~ 146 (360)
...|+|.++.|.++|++++++.+|+.++.... +.+ +..| ...|++++|+..+..
T Consensus 75 ~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qv----------k~~-~~~~---------------~~~G~~~~~~~~~~~ 128 (404)
T 1gpj_A 75 VKRGSEAVRHLFRVASGLESMMVGEQEILRQV----------KKA-YDRA---------------ARLGTLDEALKIVFR 128 (404)
T ss_dssp EEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHH----------HHH-HHHH---------------HHHTCCCHHHHHHHH
T ss_pred eecCchHhhhheeeccCCCCCcCCcchhHHHH----------HHH-HHHH---------------HHcCCchHHHHHHHH
Confidence 35799999999999999999999998742100 000 0000 234678888888888
Q ss_pred eeEECCCCCCccccccccchhhhhhchhhccCCC-CCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHH
Q 018158 147 FVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLI-DSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEA 224 (360)
Q Consensus 147 ~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~-~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~ 224 (360)
.++++|++++.+.++. .....++|.++...... .-.+|++++|+|+|.+|.++++.++..|+ +|++++++.++.+.+
T Consensus 129 ~a~~~~k~v~~~~~~~-~~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~l 207 (404)
T 1gpj_A 129 RAINLGKRAREETRIS-EGAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVEL 207 (404)
T ss_dssp HHHHHHHHHHHHSSTT-CSCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH
T ss_pred HHhhhhccCcchhhhc-CCCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence 8999999888776654 34556677766432211 01279999999999999999999999999 899999999887444
Q ss_pred HHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH--HHHHHH--h--ccCCEEEEeCCC
Q 018158 225 KELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL--GPILEL--L--KVNGTLSVVGAP 281 (360)
Q Consensus 225 ~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~--~~~~~~--l--~~~G~~v~~g~~ 281 (360)
.+.+|++ +++..+. .+.-.++|+|++|++....+ ...+.. + ++++.++.++..
T Consensus 208 a~~~g~~-~~~~~~l---~~~l~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia 266 (404)
T 1gpj_A 208 ARDLGGE-AVRFDEL---VDHLARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIA 266 (404)
T ss_dssp HHHHTCE-ECCGGGH---HHHHHTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECC
T ss_pred HHHcCCc-eecHHhH---HHHhcCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEcc
Confidence 4448875 4444332 22235799999999865433 245555 4 556766666654
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=99.01 E-value=6.5e-10 Score=102.09 Aligned_cols=134 Identities=13% Similarity=0.158 Sum_probs=97.1
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe--EeeCccHHHHHhcCCCcCEEEEcCCCccc-
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE--FILSTNAMQMQAGKRTLDFILDTVSAKHS- 261 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~--~v~~~~~~~~~~~~~~~d~vid~~g~~~~- 261 (360)
+++|+|+|+|++|+++++.++.+|++|+++++++++++.+++ +++.. +++.... ...+.-.++|++|+|++....
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~DvVI~~~~~~~~~ 244 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLET-LFGSRVELLYSNSA-EIETAVAEADLLIGAVLVPGRR 244 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHGGGSEEEECCHH-HHHHHHHTCSEEEECCCCTTSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-hhCceeEeeeCCHH-HHHHHHcCCCEEEECCCcCCCC
Confidence 489999999999999999999999999999999999999988 55433 3433322 222223479999999986542
Q ss_pred -----HHHHHHHhccCCEEEEeCCCCC-------CcccChhhHhccCcEEEEeecC------------CHHHHHHHHHHH
Q 018158 262 -----LGPILELLKVNGTLSVVGAPEA-------PFELPSFPLIFGKRSVKGSMTG------------GMRETQEMMNVC 317 (360)
Q Consensus 262 -----~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~i~~~~~~------------~~~~~~~~~~~l 317 (360)
....++.|+++|++++++...+ ..+++...+..+++++.+.... ....++.+++++
T Consensus 245 ~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~~~~l~~l~ 324 (361)
T 1pjc_A 245 APILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTLPYVVKLA 324 (361)
T ss_dssp CCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence 5678899999999999987653 2234444556678887775321 113346677777
Q ss_pred hcC
Q 018158 318 GKY 320 (360)
Q Consensus 318 ~~~ 320 (360)
.+|
T Consensus 325 ~~G 327 (361)
T 1pjc_A 325 NQG 327 (361)
T ss_dssp HHG
T ss_pred hCC
Confidence 766
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.95 E-value=3.4e-09 Score=97.61 Aligned_cols=138 Identities=14% Similarity=0.192 Sum_probs=92.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc---
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH--- 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~--- 260 (360)
++++|+|+|+|.+|+.+++.++.+|++|+++++++++++.+++.+|.....+..+.....+.-.++|++++|++...
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~ 244 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAKA 244 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCcccc
Confidence 46899999999999999999999999999999999998888775776643443333334333457999999998653
Q ss_pred ---cHHHHHHHhccCCEEEEeCCCCCC-------cccChhhHhccCcEEEEeecC------------CHHHHHHHHHHHh
Q 018158 261 ---SLGPILELLKVNGTLSVVGAPEAP-------FELPSFPLIFGKRSVKGSMTG------------GMRETQEMMNVCG 318 (360)
Q Consensus 261 ---~~~~~~~~l~~~G~~v~~g~~~~~-------~~~~~~~~~~~~~~i~~~~~~------------~~~~~~~~~~~l~ 318 (360)
.....++.|+++|.+++++...+. .+++...+..+++.+.+.... ....++.+++++.
T Consensus 245 ~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~~~~l~~l~~ 324 (369)
T 2eez_A 245 PKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTLPYVLKLAE 324 (369)
T ss_dssp -CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHHHHHHHHHHh
Confidence 157888999999999999876532 222323344567777664321 1234566777776
Q ss_pred cCC
Q 018158 319 KYN 321 (360)
Q Consensus 319 ~~~ 321 (360)
++.
T Consensus 325 ~g~ 327 (369)
T 2eez_A 325 KGL 327 (369)
T ss_dssp HTT
T ss_pred cCh
Confidence 663
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=1.6e-09 Score=100.00 Aligned_cols=121 Identities=12% Similarity=0.184 Sum_probs=89.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc--
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS-- 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~-- 261 (360)
++++|+|+|+|.+|+.+++.++.+|++|+++++++++++.+++.+|+....+........+.-.++|++++|++.+..
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~~t 246 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGAKA 246 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCCCC
Confidence 589999999999999999999999999999999999988887767865333322222333333579999999976543
Q ss_pred ----HHHHHHHhccCCEEEEeCCCCC-------CcccChhhHhccCcEEEEeec
Q 018158 262 ----LGPILELLKVNGTLSVVGAPEA-------PFELPSFPLIFGKRSVKGSMT 304 (360)
Q Consensus 262 ----~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~i~~~~~ 304 (360)
....++.|+++|.+++++...+ +.+++...+..+++.+.+...
T Consensus 247 ~~li~~~~l~~mk~g~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i~~~ph 300 (377)
T 2vhw_A 247 PKLVSNSLVAHMKPGAVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCVAN 300 (377)
T ss_dssp CCCBCHHHHTTSCTTCEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEEECBTT
T ss_pred cceecHHHHhcCCCCcEEEEEecCCCCccccccCCCCCCCEEEECCEEEEecCC
Confidence 5788899999999999985432 223333334556777665443
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=2.5e-09 Score=99.06 Aligned_cols=157 Identities=12% Similarity=0.131 Sum_probs=108.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCcc----------------------HH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTN----------------------AM 240 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~----------------------~~ 240 (360)
++++|+|+|+|.+|++++++++.+|++|+++++++++++.+++ +|++.+ ++..+ ..
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~-~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 249 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVES-LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 249 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH-TTCEECCC-----------------------CCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence 6899999999999999999999999999999999999999988 998654 22211 11
Q ss_pred HHHhcCCCcCEEEEcC---CCcc--c-HHHHHHHhccCCEEEEeCCCC-CCc--ccChhhHhccCcEEEEeecCCHHHHH
Q 018158 241 QMQAGKRTLDFILDTV---SAKH--S-LGPILELLKVNGTLSVVGAPE-APF--ELPSFPLIFGKRSVKGSMTGGMRETQ 311 (360)
Q Consensus 241 ~~~~~~~~~d~vid~~---g~~~--~-~~~~~~~l~~~G~~v~~g~~~-~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~ 311 (360)
.+.+...++|++|+|+ |... . ....++.|++++.+++++... +.+ ..+...+..+++++.++........+
T Consensus 250 ~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~~p~~~~~ 329 (384)
T 1l7d_A 250 AVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPSRVAA 329 (384)
T ss_dssp HHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSSGGGGGHH
T ss_pred HHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecccCCcEEEECCEEEEEeCCCcchhHH
Confidence 1333456899999999 5322 2 378889999999999998643 222 22333456788888887654333345
Q ss_pred HHHHHHhcCCCccc---eE----EECCccHHHHHHHH
Q 018158 312 EMMNVCGKYNITCN---IE----VIKPDQINEALDRL 341 (360)
Q Consensus 312 ~~~~~l~~~~l~~~---i~----~~~~~~~~~a~~~~ 341 (360)
.+.+++.++.+... .. .+.++.-++.++..
T Consensus 330 ~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 366 (384)
T 1l7d_A 330 DASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGT 366 (384)
T ss_dssp HHHHHHHHHHHHHHGGGEETTTTEECCCTTCHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHhCCcchhhccccCHHHhcC
Confidence 57777777655331 21 34454455555543
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=3.5e-08 Score=91.60 Aligned_cols=121 Identities=16% Similarity=0.185 Sum_probs=87.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe-eCc-------------cHH-------HH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI-LST-------------NAM-------QM 242 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~-------------~~~-------~~ 242 (360)
++++|+|+|+|.+|+.++++|+.+|++|++++++.++++.+++ +|++.+. +.. +.+ .+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~-lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l 249 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF 249 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHH-TTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence 5889999999999999999999999999999999999998877 8976542 211 010 12
Q ss_pred HhcCCCcCEEEEcCCCc-----cc-HHHHHHHhccCCEEEEeCCCC-CCcccCh--h-hHhccCcEEEEeecC
Q 018158 243 QAGKRTLDFILDTVSAK-----HS-LGPILELLKVNGTLSVVGAPE-APFELPS--F-PLIFGKRSVKGSMTG 305 (360)
Q Consensus 243 ~~~~~~~d~vid~~g~~-----~~-~~~~~~~l~~~G~~v~~g~~~-~~~~~~~--~-~~~~~~~~i~~~~~~ 305 (360)
.+...++|++|++++.+ .. ....++.|++++.+++++... +.+.... . .+..+++.+.+....
T Consensus 250 ~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g~~~~ 322 (401)
T 1x13_A 250 AAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYTDL 322 (401)
T ss_dssp HHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTSEEECTTSCEEECCSCT
T ss_pred HHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcccCCCceEEECCEEEEeeCCC
Confidence 33345799999995321 22 368899999999999998642 3333322 2 255688999886553
|
| >3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=6e-08 Score=91.68 Aligned_cols=174 Identities=16% Similarity=0.153 Sum_probs=114.1
Q ss_pred hhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhc
Q 018158 166 AGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAG 245 (360)
Q Consensus 166 ~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~ 245 (360)
...++|+++.+.... ..+|++|+|+|.|.+|..+++.++.+|++|+++++++.+...+++ +|++ +++. + +.
T Consensus 256 ~~~s~~~g~~r~~~~-~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~-~Ga~-~~~l---~---e~ 326 (494)
T 3ce6_A 256 TRHSLIDGINRGTDA-LIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMM-EGFD-VVTV---E---EA 326 (494)
T ss_dssp HHHHHHHHHHHHHCC-CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCE-ECCH---H---HH
T ss_pred hhhhhhHHHHhccCC-CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCE-EecH---H---HH
Confidence 445566666443211 238999999999999999999999999999999999999888888 8975 3321 1 12
Q ss_pred CCCcCEEEEcCCCcccHH-HHHHHhccCCEEEEeCCCCCCcccChhhHhccCc---EEEEeec-CCHHHHHHHHHHHhcC
Q 018158 246 KRTLDFILDTVSAKHSLG-PILELLKVNGTLSVVGAPEAPFELPSFPLIFGKR---SVKGSMT-GGMRETQEMMNVCGKY 320 (360)
Q Consensus 246 ~~~~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~---~i~~~~~-~~~~~~~~~~~~l~~~ 320 (360)
-.++|+|++++|....+. ..++.|+++|+++++|.... .++...+..+.+ ++.+... .....+...+.++.++
T Consensus 327 l~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~~--eId~~aL~~~aL~~~~I~~~ldv~~~~~~~~~l~LL~~g 404 (494)
T 3ce6_A 327 IGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDN--EIDMAGLERSGATRVNVKPQVDLWTFGDTGRSIIVLSEG 404 (494)
T ss_dssp GGGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSGG--GBCHHHHHHTTCEEEEEETTEEEEECTTTCCEEEEEGGG
T ss_pred HhCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCCC--ccCHHHHHHhhhccceEEEEEEEeecCCcchHHHHHhCC
Confidence 357999999999876665 88999999999999987542 344445544333 3332111 0001111222344455
Q ss_pred CCc------cc----e-EEECCccHHHHHHHHHcCCCceeEE
Q 018158 321 NIT------CN----I-EVIKPDQINEALDRLARNDVRYRFV 351 (360)
Q Consensus 321 ~l~------~~----i-~~~~~~~~~~a~~~~~~~~~~gkvv 351 (360)
++. +. + +.| .+++.++++.+.+++..++.|
T Consensus 405 rlvnL~~~TPH~a~~~~~s~-~~qa~~ai~~~~~g~~~~~~V 445 (494)
T 3ce6_A 405 RLLNLGNATGHPSFVMSNSF-ANQTIAQIELWTKNDEYDNEV 445 (494)
T ss_dssp SCHHHHHSCCSCHHHHHHHH-HHHHHHHHHHHHTGGGCCSSE
T ss_pred CEEeccCCCCCccccchHHH-HHHHHHHHHHHHcCCCCCCEE
Confidence 542 11 1 223 567888888888766555444
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.52 E-value=5.3e-07 Score=82.76 Aligned_cols=121 Identities=16% Similarity=0.199 Sum_probs=87.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEee-------------Ccc----------HH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFIL-------------STN----------AM 240 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~-------------~~~----------~~ 240 (360)
++.+|+|+|+|.+|+.++++++.+|++|+++++++++++.+++ +|++.+.. +.. ..
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVAS-LGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH-TTCEECCCCC-----------------CHHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 5689999999999999999999999999999999999999998 88753321 110 11
Q ss_pred HHHhcCCCcCEEEEcCCCc------ccHHHHHHHhccCCEEEEeCCCC-CCccc--ChhhHhccCcEEEEeecC
Q 018158 241 QMQAGKRTLDFILDTVSAK------HSLGPILELLKVNGTLSVVGAPE-APFEL--PSFPLIFGKRSVKGSMTG 305 (360)
Q Consensus 241 ~~~~~~~~~d~vid~~g~~------~~~~~~~~~l~~~G~~v~~g~~~-~~~~~--~~~~~~~~~~~i~~~~~~ 305 (360)
.+.+.-.+.|++|.|+..+ ..-...++.|++++.+++++... +.+.. +...+..+++.+.+....
T Consensus 268 ~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~~~~~~~~~GV~~~gv~nl 341 (405)
T 4dio_A 268 LVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEAGKVTEVGGVRIVGHLNV 341 (405)
T ss_dssp HHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCCTTEEEEETTEEEEECSSG
T ss_pred HHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccCCCCeEEECCEEEEEeCCC
Confidence 2333357899999996422 12478999999999999997532 33322 112234577888877653
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=98.51 E-value=4.8e-07 Score=82.35 Aligned_cols=120 Identities=13% Similarity=0.194 Sum_probs=86.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeC-------------------ccHHHHHh
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILS-------------------TNAMQMQA 244 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~-------------------~~~~~~~~ 244 (360)
++.+|+|+|+|.+|+.+++.++.+|++|++++++.++++.+++ +|++.+... .....+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e 261 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-VGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED 261 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-TTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence 5789999999999999999999999999999999999999998 887543210 01122334
Q ss_pred cCCCcCEEEEcCCCc------ccHHHHHHHhccCCEEEEeCCCCC-Ccc--cChhhHhccCcEEEEeec
Q 018158 245 GKRTLDFILDTVSAK------HSLGPILELLKVNGTLSVVGAPEA-PFE--LPSFPLIFGKRSVKGSMT 304 (360)
Q Consensus 245 ~~~~~d~vid~~g~~------~~~~~~~~~l~~~G~~v~~g~~~~-~~~--~~~~~~~~~~~~i~~~~~ 304 (360)
.-+++|+||.++..+ ......++.|++++.+++++...+ .+. .+......+++.+.+...
T Consensus 262 ~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e~t~~~~~~~~~gV~~~~v~n 330 (381)
T 3p2y_A 262 AITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCELTEPGRTIVHHGVTITSPLN 330 (381)
T ss_dssp HHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTCEEEETTEEEECCSC
T ss_pred HHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCccccccCCCeEEECCEEEEeeCC
Confidence 468999999986321 124789999999999999976442 222 111123345667666544
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=98.38 E-value=1.1e-07 Score=75.24 Aligned_cols=107 Identities=16% Similarity=0.083 Sum_probs=78.4
Q ss_pred hhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCC
Q 018158 168 ITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKR 247 (360)
Q Consensus 168 ~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~ 247 (360)
..++++++.... ..+++++|+|+|.+|.+.++.++..|++|++++++.++.+.+.+.+|.. +....+.. +.-.
T Consensus 7 sv~~~a~~~~~~---~~~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~-~~~~~~~~---~~~~ 79 (144)
T 3oj0_A 7 SIPSIVYDIVRK---NGGNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYE-YVLINDID---SLIK 79 (144)
T ss_dssp SHHHHHHHHHHH---HCCCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCE-EEECSCHH---HHHH
T ss_pred cHHHHHHHHHHh---ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCc-eEeecCHH---HHhc
Confidence 344666665542 2589999999999999999999989999999999999887766658853 22333322 2234
Q ss_pred CcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 248 TLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 248 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
++|+|++|++....+-.. ..+++++.+++++.+.
T Consensus 80 ~~Divi~at~~~~~~~~~-~~l~~g~~vid~~~p~ 113 (144)
T 3oj0_A 80 NNDVIITATSSKTPIVEE-RSLMPGKLFIDLGNPP 113 (144)
T ss_dssp TCSEEEECSCCSSCSBCG-GGCCTTCEEEECCSSC
T ss_pred CCCEEEEeCCCCCcEeeH-HHcCCCCEEEEccCCc
Confidence 799999999876433222 6788899999998754
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.33 E-value=4.6e-06 Score=62.96 Aligned_cols=94 Identities=12% Similarity=0.076 Sum_probs=68.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcCCCe-EeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADE-FILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
.+.+++|+|+|.+|..+++.+...| .+|+++++++++.+.+.. .+... ..+..+.+.....-.++|+||++++....
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~~ 82 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR-MGVATKQVDAKDEAGLAKALGGFDAVISAAPFFLT 82 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT-TTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGGH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh-CCCcEEEecCCCHHHHHHHHcCCCEEEECCCchhh
Confidence 4678999999999999999999999 789999999998888775 56433 23454544555555689999999986644
Q ss_pred HHHHHHHhccCCEEEEe
Q 018158 262 LGPILELLKVNGTLSVV 278 (360)
Q Consensus 262 ~~~~~~~l~~~G~~v~~ 278 (360)
......+.+.+..++.+
T Consensus 83 ~~~~~~~~~~g~~~~~~ 99 (118)
T 3ic5_A 83 PIIAKAAKAAGAHYFDL 99 (118)
T ss_dssp HHHHHHHHHTTCEEECC
T ss_pred HHHHHHHHHhCCCEEEe
Confidence 33444444455555544
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=98.32 E-value=8.9e-06 Score=72.24 Aligned_cols=110 Identities=14% Similarity=0.135 Sum_probs=82.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
.|++++|+|+|.+|..+++.++..|++|++++++.++.+.+.+ +|... ++.. ...+.-.+.|+|+.+++......
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~-~~~~---~l~~~l~~aDvVi~~~p~~~i~~ 228 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAE-MGMEP-FHIS---KAAQELRDVDVCINTIPALVVTA 228 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTSEE-EEGG---GHHHHTTTCSEEEECCSSCCBCH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-CCCee-cChh---hHHHHhcCCCEEEECCChHHhCH
Confidence 6899999999999999999999999999999999988777776 88653 3222 22334568999999998654446
Q ss_pred HHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEE
Q 018158 264 PILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVK 300 (360)
Q Consensus 264 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~ 300 (360)
..+..|++++.+++++.......+ ......++.+.
T Consensus 229 ~~l~~mk~~~~lin~ar~~~~~~~--~~a~~~Gv~~~ 263 (293)
T 3d4o_A 229 NVLAEMPSHTFVIDLASKPGGTDF--RYAEKRGIKAL 263 (293)
T ss_dssp HHHHHSCTTCEEEECSSTTCSBCH--HHHHHHTCEEE
T ss_pred HHHHhcCCCCEEEEecCCCCCCCH--HHHHHCCCEEE
Confidence 778899999999999865444333 33333455554
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.29 E-value=9.1e-06 Score=66.78 Aligned_cols=93 Identities=16% Similarity=0.196 Sum_probs=70.1
Q ss_pred CcEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHcCCCeEe-eCccHHHHHhc--CCCcCEEEEcCCCcc
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKELLGADEFI-LSTNAMQMQAG--KRTLDFILDTVSAKH 260 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~--~~~~d~vid~~g~~~ 260 (360)
+++++|+|+|.+|..+++.++.. |.+|+++++++++.+.+++ .|...+. |..+.+..... ..++|+++.+++...
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~-~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~~ 117 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS-EGRNVISGDATDPDFWERILDTGHVKLVLLAMPHHQ 117 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-TTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH-CCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCChH
Confidence 66899999999999999999998 9999999999999988887 7876443 44454445554 468999999998765
Q ss_pred cHHHHHHHhcc---CCEEEEe
Q 018158 261 SLGPILELLKV---NGTLSVV 278 (360)
Q Consensus 261 ~~~~~~~~l~~---~G~~v~~ 278 (360)
....+...++. ..+++..
T Consensus 118 ~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 118 GNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp HHHHHHHHHHHTTCCSEEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEE
Confidence 44444445544 3455543
|
| >3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=4.2e-06 Score=77.02 Aligned_cols=92 Identities=20% Similarity=0.256 Sum_probs=75.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
.|++++|+|.|.+|..+++.++.+|++|+++++++.+...+.. .|.. +.+ +.+.-.+.|+++.|.|....+.
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~-~G~~-v~~------Leeal~~ADIVi~atgt~~lI~ 290 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACM-DGFR-LVK------LNEVIRQVDIVITCTGNKNVVT 290 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCE-ECC------HHHHTTTCSEEEECSSCSCSBC
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHH-cCCE-ecc------HHHHHhcCCEEEECCCCcccCC
Confidence 7999999999999999999999999999999999887766666 6643 211 2334568999999988665554
Q ss_pred -HHHHHhccCCEEEEeCCCCC
Q 018158 264 -PILELLKVNGTLSVVGAPEA 283 (360)
Q Consensus 264 -~~~~~l~~~G~~v~~g~~~~ 283 (360)
+.+..|++++.++.+|....
T Consensus 291 ~e~l~~MK~gailINvgrg~~ 311 (435)
T 3gvp_A 291 REHLDRMKNSCIVCNMGHSNT 311 (435)
T ss_dssp HHHHHHSCTTEEEEECSSTTT
T ss_pred HHHHHhcCCCcEEEEecCCCc
Confidence 88999999999999987653
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=2.8e-06 Score=67.88 Aligned_cols=89 Identities=16% Similarity=0.156 Sum_probs=66.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHH-HHcCCCeEe-eCccHHHHHhc-CCCcCEEEEcCCCcc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAK-ELLGADEFI-LSTNAMQMQAG-KRTLDFILDTVSAKH 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~-~~~g~~~~v-~~~~~~~~~~~-~~~~d~vid~~g~~~ 260 (360)
++++++|+|+|.+|..+++.++..|.+|+++++++++.+.++ + .|...+. +..+.+..... ..++|+||.+++...
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~-~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~ 96 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSE-FSGFTVVGDAAEFETLKECGMEKADMVFAFTNDDS 96 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTT-CCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhc-CCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCcH
Confidence 788999999999999999999999999999999998887766 4 6654332 23333333333 467999999999876
Q ss_pred cHHHHHHHhcc-CC
Q 018158 261 SLGPILELLKV-NG 273 (360)
Q Consensus 261 ~~~~~~~~l~~-~G 273 (360)
....+...++. .+
T Consensus 97 ~~~~~~~~~~~~~~ 110 (155)
T 2g1u_A 97 TNFFISMNARYMFN 110 (155)
T ss_dssp HHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHCC
Confidence 55566566654 44
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.19 E-value=2e-05 Score=70.21 Aligned_cols=110 Identities=13% Similarity=0.139 Sum_probs=82.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
.+++++|+|+|.+|..+++.++..|++|++.+++.++.+.+.+ +|.. .++.. ...+.-.+.|+|+.+++....-.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-~g~~-~~~~~---~l~~~l~~aDvVi~~~p~~~i~~ 230 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITE-MGLV-PFHTD---ELKEHVKDIDICINTIPSMILNQ 230 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCE-EEEGG---GHHHHSTTCSEEEECCSSCCBCH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CCCe-EEchh---hHHHHhhCCCEEEECCChhhhCH
Confidence 6899999999999999999999999999999999988777777 7764 33322 23334568999999998654345
Q ss_pred HHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEE
Q 018158 264 PILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVK 300 (360)
Q Consensus 264 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~ 300 (360)
..+..|++++.+++++.......+ .....++..+.
T Consensus 231 ~~~~~mk~g~~lin~a~g~~~~~~--~~a~~~G~~~i 265 (300)
T 2rir_A 231 TVLSSMTPKTLILDLASRPGGTDF--KYAEKQGIKAL 265 (300)
T ss_dssp HHHTTSCTTCEEEECSSTTCSBCH--HHHHHHTCEEE
T ss_pred HHHHhCCCCCEEEEEeCCCCCcCH--HHHHHCCCEEE
Confidence 677889999999999875444333 33333455544
|
| >1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33 | Back alignment and structure |
|---|
Probab=98.19 E-value=1e-06 Score=77.21 Aligned_cols=94 Identities=15% Similarity=0.159 Sum_probs=69.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
++.+||.+|+|. |..+..+++.. |.+|++++.+++..+.+++......++.. +..........+|+|+... ....+
T Consensus 85 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~-d~~~~~~~~~~fD~v~~~~-~~~~l 161 (269)
T 1p91_A 85 KATAVLDIGCGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVA-SSHRLPFSDTSMDAIIRIY-APCKA 161 (269)
T ss_dssp TCCEEEEETCTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEEC-CTTSCSBCTTCEEEEEEES-CCCCH
T ss_pred CCCEEEEECCCC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEc-chhhCCCCCCceeEEEEeC-ChhhH
Confidence 789999999987 99999999986 78999999999999999884322223222 2111111235799999644 44568
Q ss_pred HHHHHHhccCCEEEEeCC
Q 018158 263 GPILELLKVNGTLSVVGA 280 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~ 280 (360)
..+.+.|+++|+++....
T Consensus 162 ~~~~~~L~pgG~l~~~~~ 179 (269)
T 1p91_A 162 EELARVVKPGGWVITATP 179 (269)
T ss_dssp HHHHHHEEEEEEEEEEEE
T ss_pred HHHHHhcCCCcEEEEEEc
Confidence 999999999999987743
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.15 E-value=7.1e-06 Score=71.80 Aligned_cols=99 Identities=19% Similarity=0.212 Sum_probs=75.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHh-------cCCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQA-------GKRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~-------~~~~~d~v 252 (360)
.|+++||+|+ +++|.+.++.+...|++|++++++.++++.+.+.+|.... .|-.+.+..+. .-.++|++
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL 107 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVL 107 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899999999 9999999999999999999999999998888777875433 24334333222 14579999
Q ss_pred EEcCCCc-------------------------ccHHHHHHHhccCCEEEEeCCCC
Q 018158 253 LDTVSAK-------------------------HSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 253 id~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
++++|.. ...+.++..|+++|+++.++...
T Consensus 108 VNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~ 162 (273)
T 4fgs_A 108 FVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTA 162 (273)
T ss_dssp EECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGG
T ss_pred EECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehh
Confidence 9999842 12456667788889999997654
|
| >3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=8.6e-06 Score=71.70 Aligned_cols=97 Identities=14% Similarity=0.265 Sum_probs=72.5
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE-eeCccHHHHHhcCCCcCEEEEcCC
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF-ILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
++++++||.+|+|+.++.++.+++..|++|++++.+++..+.++++ .|.+.+ +...+..... ...||+|+....
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a~ 197 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMVAAL 197 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEECTT
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEECCC
Confidence 4599999999999888888888988899999999999998888774 253222 1111221222 578999997655
Q ss_pred Cc---ccHHHHHHHhccCCEEEEeCC
Q 018158 258 AK---HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 258 ~~---~~~~~~~~~l~~~G~~v~~g~ 280 (360)
.. ..+..+.+.|++||+++....
T Consensus 198 ~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 198 AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 43 357899999999999987653
|
| >1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=98.12 E-value=4.3e-06 Score=73.61 Aligned_cols=96 Identities=20% Similarity=0.224 Sum_probs=68.8
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHc---CC-CeE-eeCccHHHHHhcCCCcCEEEE
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAF--GHHVTVISTSPSKEKEAKELL---GA-DEF-ILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~--G~~V~~~~~~~~~~~~~~~~~---g~-~~~-v~~~~~~~~~~~~~~~d~vid 254 (360)
+.++++||-+|+|. |..++.+++.. +.+|++++.+++..+.+++.+ |. +.+ +...+.... .....+|+|+.
T Consensus 110 ~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~ 187 (277)
T 1o54_A 110 VKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDVDALFL 187 (277)
T ss_dssp CCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSEEEEEE
T ss_pred CCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCccCEEEE
Confidence 44899999999976 88888999886 468999999999888877643 43 111 111121111 11346999997
Q ss_pred cCCCc-ccHHHHHHHhccCCEEEEeC
Q 018158 255 TVSAK-HSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 255 ~~g~~-~~~~~~~~~l~~~G~~v~~g 279 (360)
..... ..+..+.+.|+++|.++...
T Consensus 188 ~~~~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 188 DVPDPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp CCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred CCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence 66554 56889999999999998774
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=1.1e-05 Score=75.66 Aligned_cols=91 Identities=20% Similarity=0.215 Sum_probs=74.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL- 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~- 262 (360)
.|++++|+|+|++|.++++.++..|++|+++++++.+...+.. .|.+ +.+ ..+....+|+++++.|....+
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~-~g~d-v~~------lee~~~~aDvVi~atG~~~vl~ 335 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATM-EGLQ-VLT------LEDVVSEADIFVTTTGNKDIIM 335 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCE-ECC------GGGTTTTCSEEEECSSCSCSBC
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-hCCc-cCC------HHHHHHhcCEEEeCCCChhhhh
Confidence 7999999999999999999999999999999999988877777 6642 221 123456799999999876555
Q ss_pred HHHHHHhccCCEEEEeCCCC
Q 018158 263 GPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~~~ 282 (360)
...+..|++++.++.+|...
T Consensus 336 ~e~l~~mk~gaiVvNaG~~~ 355 (488)
T 3ond_A 336 LDHMKKMKNNAIVCNIGHFD 355 (488)
T ss_dssp HHHHTTSCTTEEEEESSSTT
T ss_pred HHHHHhcCCCeEEEEcCCCC
Confidence 45889999999999998753
|
| >3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=98.09 E-value=1.8e-05 Score=73.04 Aligned_cols=91 Identities=19% Similarity=0.213 Sum_probs=73.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL- 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~- 262 (360)
.|++++|+|.|.+|..+++.++.+|++|+++++++.+...+.. .|.. +++ +.+.-...|+++.+.|....+
T Consensus 246 ~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~-~G~~-vv~------LeElL~~ADIVv~atgt~~lI~ 317 (464)
T 3n58_A 246 AGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAM-DGFE-VVT------LDDAASTADIVVTTTGNKDVIT 317 (464)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH-TTCE-ECC------HHHHGGGCSEEEECCSSSSSBC
T ss_pred cCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHh-cCce-ecc------HHHHHhhCCEEEECCCCccccC
Confidence 7999999999999999999999999999999998877665555 6653 222 122345799999999866544
Q ss_pred HHHHHHhccCCEEEEeCCCC
Q 018158 263 GPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~~~ 282 (360)
.+.+..|++++.++++|...
T Consensus 318 ~e~l~~MK~GAILINvGRgd 337 (464)
T 3n58_A 318 IDHMRKMKDMCIVGNIGHFD 337 (464)
T ss_dssp HHHHHHSCTTEEEEECSSST
T ss_pred HHHHhcCCCCeEEEEcCCCC
Confidence 68899999999999998765
|
| >3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=3.9e-05 Score=70.84 Aligned_cols=105 Identities=15% Similarity=0.180 Sum_probs=78.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
.|++|+|+|.|.+|...++.++.+|++|+++++++.+...+.. .|...+ ...+.-...|+++.+.+....+.
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~-~G~~~~-------sL~eal~~ADVVilt~gt~~iI~ 281 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAM-EGYQVL-------LVEDVVEEAHIFVTTTGNDDIIT 281 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCEEC-------CHHHHTTTCSEEEECSSCSCSBC
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHH-hCCeec-------CHHHHHhhCCEEEECCCCcCccC
Confidence 6899999999999999999999999999999999887766666 665321 23344568999999887654443
Q ss_pred -HHHHHhccCCEEEEeCCCCCCcccChhhHhccCcE
Q 018158 264 -PILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRS 298 (360)
Q Consensus 264 -~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 298 (360)
..++.|+++..++.+|.. ...++...+..+..+
T Consensus 282 ~e~l~~MK~gAIVINvgRg--~vEID~~~L~~~~~~ 315 (436)
T 3h9u_A 282 SEHFPRMRDDAIVCNIGHF--DTEIQVAWLKANAKE 315 (436)
T ss_dssp TTTGGGCCTTEEEEECSSS--GGGBCHHHHHHHCSE
T ss_pred HHHHhhcCCCcEEEEeCCC--CCccCHHHHHhhcCc
Confidence 677899999999999843 333444444443333
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.88 E-value=0.0002 Score=55.90 Aligned_cols=94 Identities=18% Similarity=0.149 Sum_probs=69.1
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe-eCccHHHHHhc-CCCcCEEEEcCCCccc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI-LSTNAMQMQAG-KRTLDFILDTVSAKHS 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~-~~~~d~vid~~g~~~~ 261 (360)
..++++|+|.|.+|..+++.++..|.+|+++++++++.+.+++ .|...+. |..+.+.+... ..++|+++.+++....
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~-~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~ 84 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE-RGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYE 84 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-TTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-cCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHH
Confidence 4578999999999999999999999999999999999999888 7865433 44444444443 3679999999987643
Q ss_pred HH---HHHHHhccCCEEEEe
Q 018158 262 LG---PILELLKVNGTLSVV 278 (360)
Q Consensus 262 ~~---~~~~~l~~~G~~v~~ 278 (360)
.. ...+.+.+..+++..
T Consensus 85 n~~~~~~a~~~~~~~~iiar 104 (140)
T 3fwz_A 85 AGEIVASARAKNPDIEIIAR 104 (140)
T ss_dssp HHHHHHHHHHHCSSSEEEEE
T ss_pred HHHHHHHHHHHCCCCeEEEE
Confidence 22 223344455565544
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=97.86 E-value=5.2e-05 Score=65.81 Aligned_cols=99 Identities=13% Similarity=0.180 Sum_probs=71.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHh-------cCCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQA-------GKRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~-------~~~~~d~v 252 (360)
.|+++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.++.... .|-.+.+.... ...++|++
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 86 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLL 86 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 6889999999 9999999999999999999999999988887776664322 24444333221 13579999
Q ss_pred EEcCCCcc-------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 253 LDTVSAKH-------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 253 id~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+++.|... ..+.+...++++|+++.++...
T Consensus 87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~ 141 (255)
T 4eso_A 87 HINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVA 141 (255)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGG
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChh
Confidence 99987421 1233444556678999997654
|
| >1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.78 E-value=7.9e-05 Score=65.41 Aligned_cols=97 Identities=18% Similarity=0.236 Sum_probs=69.0
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHc----C--CCeE-eeCccHHHHHhcCCCcCEE
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAF--GHHVTVISTSPSKEKEAKELL----G--ADEF-ILSTNAMQMQAGKRTLDFI 252 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~--G~~V~~~~~~~~~~~~~~~~~----g--~~~~-v~~~~~~~~~~~~~~~d~v 252 (360)
++++++||-+|+| .|..+..+++.. +.+|++++.+++..+.+++.+ | ...+ +...+..........+|+|
T Consensus 97 ~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v 175 (280)
T 1i9g_A 97 IFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRA 175 (280)
T ss_dssp CCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEE
T ss_pred CCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEE
Confidence 4499999999998 688888999876 468999999999888887743 4 2222 1122221111114579999
Q ss_pred EEcCCCc-ccHHHHHHHhccCCEEEEeC
Q 018158 253 LDTVSAK-HSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 253 id~~g~~-~~~~~~~~~l~~~G~~v~~g 279 (360)
+...... ..+..+.+.|+++|+++.+.
T Consensus 176 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 203 (280)
T 1i9g_A 176 VLDMLAPWEVLDAVSRLLVAGGVLMVYV 203 (280)
T ss_dssp EEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred EECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence 8766544 56889999999999998774
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00019 Score=55.99 Aligned_cols=76 Identities=18% Similarity=0.107 Sum_probs=59.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhc-CCCcCEEEEcCCCcc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAG-KRTLDFILDTVSAKH 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~-~~~~d~vid~~g~~~ 260 (360)
..++++|+|+|.+|..+++.+...|.+|+++++++++.+.+++ .|...+ .|..+.+.+... ..++|+++.+++...
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~-~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~ 82 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLED-EGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDE 82 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-TTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-CCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHH
Confidence 3467999999999999999999999999999999999988887 675433 244455444444 367999999998654
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00022 Score=61.70 Aligned_cols=99 Identities=16% Similarity=0.164 Sum_probs=70.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeEe---eCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEFI---LSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~v---~~~~~~~~~~-------~~~~~ 249 (360)
.|+++||+|+ +++|.+.++.+-..|++|+++++++++++...+. .|.+... |-.+.+..+. ...++
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 87 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV 87 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence 6899999999 9999999999999999999999999877665443 3433222 3333332222 24679
Q ss_pred CEEEEcCCCc-------------------------ccHHHHHHHhc---cCCEEEEeCCCC
Q 018158 250 DFILDTVSAK-------------------------HSLGPILELLK---VNGTLSVVGAPE 282 (360)
Q Consensus 250 d~vid~~g~~-------------------------~~~~~~~~~l~---~~G~~v~~g~~~ 282 (360)
|++++++|.. ...+.++..|. .+|+|+.++...
T Consensus 88 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~ 148 (255)
T 4g81_D 88 DILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLT 148 (255)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehh
Confidence 9999999832 11345566662 468999998755
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00029 Score=60.54 Aligned_cols=97 Identities=11% Similarity=0.146 Sum_probs=68.6
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHh-------cCCCcCEEE
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQA-------GKRTLDFIL 253 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~-------~~~~~d~vi 253 (360)
++++||+|+ +++|.+.++.+-..|++|+++++++++.+.+.+ -+.... .|-.+.+.... .-+++|+++
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLV 80 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK-ERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLV 80 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT-TCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 478999999 999999999999999999999999998887777 343322 23333332222 146799999
Q ss_pred EcCCCc-------------------------ccHHHHHHHh-ccCCEEEEeCCCC
Q 018158 254 DTVSAK-------------------------HSLGPILELL-KVNGTLSVVGAPE 282 (360)
Q Consensus 254 d~~g~~-------------------------~~~~~~~~~l-~~~G~~v~~g~~~ 282 (360)
+++|.. ...+.+...| +.+|+++.+++..
T Consensus 81 NNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~ 135 (247)
T 3ged_A 81 NNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTR 135 (247)
T ss_dssp ECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGG
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecc
Confidence 999732 1123444454 4579999997654
|
| >2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.75 E-value=5.8e-05 Score=68.32 Aligned_cols=98 Identities=19% Similarity=0.164 Sum_probs=64.8
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHcC--------------CC--eEeeCccHHHHH
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFG--HHVTVISTSPSKEKEAKELLG--------------AD--EFILSTNAMQMQ 243 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G--~~V~~~~~~~~~~~~~~~~~g--------------~~--~~v~~~~~~~~~ 243 (360)
+.++++||-+|+|. |..++.+++..| .+|++++.+++..+.+++.+. .. .++..+-.+...
T Consensus 103 ~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~ 181 (336)
T 2b25_A 103 INPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATE 181 (336)
T ss_dssp CCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-
T ss_pred CCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccc
Confidence 44999999999976 888888888876 689999999998888776431 01 111111111100
Q ss_pred hc-CCCcCEEEEcCCCc-ccHHHHHHHhccCCEEEEeCC
Q 018158 244 AG-KRTLDFILDTVSAK-HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 244 ~~-~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~ 280 (360)
.. ...+|+|+-..... ..+..+.+.|+++|+++....
T Consensus 182 ~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 182 DIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp ------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred ccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 11 24699998654433 357889999999999987643
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00033 Score=60.28 Aligned_cols=75 Identities=19% Similarity=0.213 Sum_probs=56.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe---eCccHHHHHhc---CCCcCEEEEcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI---LSTNAMQMQAG---KRTLDFILDTV 256 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v---~~~~~~~~~~~---~~~~d~vid~~ 256 (360)
+++++||+|+ |++|..+++.+...|++|++++++.++++.+.+.+.....+ |..+.+..... ..++|++|+++
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~A 92 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCNA 92 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEECC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEECC
Confidence 7899999999 99999999999899999999999999888877656543222 33333333222 35799999999
Q ss_pred CC
Q 018158 257 SA 258 (360)
Q Consensus 257 g~ 258 (360)
|.
T Consensus 93 g~ 94 (249)
T 3f9i_A 93 GI 94 (249)
T ss_dssp C-
T ss_pred CC
Confidence 83
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00034 Score=60.42 Aligned_cols=99 Identities=10% Similarity=0.126 Sum_probs=70.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
+|+++||+|+ +++|.+.++.+-..|++|+++++++++++.+.+. .|.+.. .|-.+.+..... -.++
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i 85 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI 85 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 6899999999 9999999999889999999999999887666554 454322 244444333221 4679
Q ss_pred CEEEEcCCCc--------------------------ccHHHHHHHhc--cCCEEEEeCCCC
Q 018158 250 DFILDTVSAK--------------------------HSLGPILELLK--VNGTLSVVGAPE 282 (360)
Q Consensus 250 d~vid~~g~~--------------------------~~~~~~~~~l~--~~G~~v~~g~~~ 282 (360)
|++++++|.. ...+.++..|+ .+|+|+.++...
T Consensus 86 DiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~ 146 (254)
T 4fn4_A 86 DVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIA 146 (254)
T ss_dssp CEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechh
Confidence 9999998721 11345566554 368999998654
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00029 Score=61.65 Aligned_cols=75 Identities=17% Similarity=0.193 Sum_probs=56.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~d~v 252 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.++.... .|-.+.+..... ..++|++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 106 (272)
T 4dyv_A 27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVL 106 (272)
T ss_dssp -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999999 9999999999989999999999999988877766663222 244444333222 3489999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
++++|.
T Consensus 107 VnnAg~ 112 (272)
T 4dyv_A 107 FNNAGT 112 (272)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999984
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00036 Score=59.49 Aligned_cols=96 Identities=15% Similarity=0.133 Sum_probs=68.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC-CeEe-eCccHHHHHhcCCCcCEEEEcCCCcc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA-DEFI-LSTNAMQMQAGKRTLDFILDTVSAKH 260 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~-~~~v-~~~~~~~~~~~~~~~d~vid~~g~~~ 260 (360)
.++++||+|+ |.+|..+++.+...|++|++++|++++.+.+.. .+. ..+. |.. +.+...-.++|++|+++|...
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag~~~ 96 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-RGASDIVVANLE--EDFSHAFASIDAVVFAAGSGP 96 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-TTCSEEEECCTT--SCCGGGGTTCSEEEECCCCCT
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-CCCceEEEcccH--HHHHHHHcCCCEEEECCCCCC
Confidence 5789999999 999999999999999999999999998887776 565 3221 222 233334568999999998531
Q ss_pred -------------cHHHHHHHhcc--CCEEEEeCCCC
Q 018158 261 -------------SLGPILELLKV--NGTLSVVGAPE 282 (360)
Q Consensus 261 -------------~~~~~~~~l~~--~G~~v~~g~~~ 282 (360)
....+++.++. .++++.++...
T Consensus 97 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~ 133 (236)
T 3e8x_A 97 HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVG 133 (236)
T ss_dssp TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCC
Confidence 11233444432 36899988754
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00037 Score=60.00 Aligned_cols=75 Identities=20% Similarity=0.189 Sum_probs=57.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe---eCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI---LSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v---~~~~~~~~~~~-------~~~~d~v 252 (360)
.|+++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.++..... |-.+.+..... ..++|++
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 84 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL 84 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 5889999999 99999999999999999999999999888776667644332 33333332221 3479999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
+++.|.
T Consensus 85 v~nAg~ 90 (247)
T 3rwb_A 85 VNNASI 90 (247)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999984
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=9.2e-05 Score=57.72 Aligned_cols=75 Identities=20% Similarity=0.359 Sum_probs=55.8
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe-eCccHHHHHhc-CCCcCEEEEcCCCc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI-LSTNAMQMQAG-KRTLDFILDTVSAK 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~-~~~~d~vid~~g~~ 259 (360)
++++++|+|+|.+|..+++.+...|.+|+++++++++.+.+++ .+...+. +..+.+..... ..++|+++.+++..
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~-~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~ 81 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS-YATHAVIANATEENELLSLGIRNFEYVIVAIGAN 81 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT-TCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc
Confidence 3567999999999999999999999999999999887776655 5543222 33333334333 45799999999874
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00036 Score=61.19 Aligned_cols=99 Identities=11% Similarity=0.184 Sum_probs=70.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~d~v 252 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.++.... .|-.+.+..... ..++|++
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 105 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVL 105 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999999 9999999999999999999999999888777665664322 244443332221 3479999
Q ss_pred EEcCCCcc-------------------------cHHHHHHHhcc--CCEEEEeCCCC
Q 018158 253 LDTVSAKH-------------------------SLGPILELLKV--NGTLSVVGAPE 282 (360)
Q Consensus 253 id~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~ 282 (360)
|+++|... ..+.++..|+. +|+++.++...
T Consensus 106 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~ 162 (277)
T 4dqx_A 106 VNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYT 162 (277)
T ss_dssp EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGG
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchh
Confidence 99998320 12345555554 57999987654
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00039 Score=60.24 Aligned_cols=75 Identities=17% Similarity=0.251 Sum_probs=57.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~d~v 252 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.++.... .|-.+.+..... ..++|++
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 86 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL 86 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999999 9999999998889999999999999988777665664322 244444332221 3489999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
++++|.
T Consensus 87 v~~Ag~ 92 (259)
T 4e6p_A 87 VNNAAL 92 (259)
T ss_dssp EECCCC
T ss_pred EECCCc
Confidence 999984
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=97.70 E-value=6.8e-05 Score=64.20 Aligned_cols=99 Identities=14% Similarity=0.139 Sum_probs=68.2
Q ss_pred CCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC-CeEeeCccHHHHHhc---CCCcCEEEEcCC
Q 018158 183 PAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA-DEFILSTNAMQMQAG---KRTLDFILDTVS 257 (360)
Q Consensus 183 ~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~-~~~v~~~~~~~~~~~---~~~~d~vid~~g 257 (360)
..|+++||+|+ +++|.+.++.+...|++|++++++.++++.... -.. ....|-.+.+..+.. -.++|+++++.|
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAG 87 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRH-PRIRREELDITDSQRLQRLFEALPRLDVLVNNAG 87 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCC-TTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhc-CCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 47999999999 999999999999999999999998876543211 111 112244444333222 467999999998
Q ss_pred Cc-----------------------ccHHHHHHHhc-cCCEEEEeCCCC
Q 018158 258 AK-----------------------HSLGPILELLK-VNGTLSVVGAPE 282 (360)
Q Consensus 258 ~~-----------------------~~~~~~~~~l~-~~G~~v~~g~~~ 282 (360)
.. ...+.++..|+ .+|+|+.+++..
T Consensus 88 i~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~ 136 (242)
T 4b79_A 88 ISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMY 136 (242)
T ss_dssp CCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGG
T ss_pred CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeecc
Confidence 42 11245556665 579999998654
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00038 Score=60.69 Aligned_cols=75 Identities=21% Similarity=0.315 Sum_probs=57.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe---eCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI---LSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v---~~~~~~~~~~~-------~~~~d~v 252 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.++....+ |-.+.+..... ..++|++
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 105 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDIL 105 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999999 99999999999999999999999999888777667754322 33443333222 3589999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|+++|.
T Consensus 106 vnnAg~ 111 (266)
T 3grp_A 106 VNNAGI 111 (266)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999984
|
| >3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus} | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00043 Score=57.75 Aligned_cols=96 Identities=13% Similarity=0.138 Sum_probs=69.1
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCC---eEeeCccHHHHHhcCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGAD---EFILSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~~~~~~~~~~~~d~vid~ 255 (360)
+.++++||-+|+|. |..++.+++. +.+|++++.+++..+.++++ +|.. .++..+-.+... ....+|+|+..
T Consensus 53 ~~~~~~vLDlGcG~-G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~-~~~~~D~v~~~ 129 (204)
T 3njr_A 53 PRRGELLWDIGGGS-GSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALA-DLPLPEAVFIG 129 (204)
T ss_dssp CCTTCEEEEETCTT-CHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGT-TSCCCSEEEEC
T ss_pred CCCCCEEEEecCCC-CHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcc-cCCCCCEEEEC
Confidence 44899999999976 8888899988 88999999999988877764 3533 222222221111 13479999976
Q ss_pred CCCcc-cHHHHHHHhccCCEEEEeCC
Q 018158 256 VSAKH-SLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 256 ~g~~~-~~~~~~~~l~~~G~~v~~g~ 280 (360)
.+... .+..+.+.|+++|+++....
T Consensus 130 ~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 130 GGGSQALYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp SCCCHHHHHHHHHHSCTTCEEEEEEC
T ss_pred CcccHHHHHHHHHhcCCCcEEEEEec
Confidence 55432 57889999999999987643
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00044 Score=63.29 Aligned_cols=121 Identities=10% Similarity=0.005 Sum_probs=84.5
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHH
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGP 264 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~ 264 (360)
.-+|+|+|+|.+|..+++.+.. ..+|++.+++.++++.+++ ......+|..+.+.+...-+++|+|++|++.......
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~-~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~~~~v 93 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE-FATPLKVDASNFDKLVEVMKEFELVIGALPGFLGFKS 93 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT-TSEEEECCTTCHHHHHHHHTTCSEEEECCCGGGHHHH
T ss_pred ccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc-cCCcEEEecCCHHHHHHHHhCCCEEEEecCCcccchH
Confidence 3479999999999998888754 5689999999988888766 4333345666666666666789999999987766677
Q ss_pred HHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCH
Q 018158 265 ILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGM 307 (360)
Q Consensus 265 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 307 (360)
+..+++.+-+++++.........-......+++.+......++
T Consensus 94 ~~~~~~~g~~yvD~s~~~~~~~~l~~~a~~~g~~~i~~~G~~P 136 (365)
T 3abi_A 94 IKAAIKSKVDMVDVSFMPENPLELRDEAEKAQVTIVFDAGFAP 136 (365)
T ss_dssp HHHHHHHTCEEEECCCCSSCGGGGHHHHHHTTCEEECCCBTTT
T ss_pred HHHHHhcCcceEeeeccchhhhhhhhhhccCCceeeecCCCCC
Confidence 7788889999999865432221111223345666665544443
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00036 Score=59.60 Aligned_cols=74 Identities=16% Similarity=0.197 Sum_probs=55.1
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHhc-------CCCcCEEE
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQAG-------KRTLDFIL 253 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~d~vi 253 (360)
++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.++.... .|-.+.+..... ..++|+++
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv 82 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL 82 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence 578999999 9999999998889999999999999988877665543211 233343332221 35799999
Q ss_pred EcCCC
Q 018158 254 DTVSA 258 (360)
Q Consensus 254 d~~g~ 258 (360)
++.|.
T Consensus 83 nnAg~ 87 (235)
T 3l6e_A 83 HCAGT 87 (235)
T ss_dssp EECCC
T ss_pred ECCCC
Confidence 99984
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00032 Score=60.78 Aligned_cols=75 Identities=15% Similarity=0.222 Sum_probs=53.9
Q ss_pred CCcEEEEEcC-C--hHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCC-C-eE--eeCccHHHHHh-------cC
Q 018158 184 AKKRIGIVGL-G--GLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGA-D-EF--ILSTNAMQMQA-------GK 246 (360)
Q Consensus 184 ~~~~vlI~Ga-g--~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~-~-~~--v~~~~~~~~~~-------~~ 246 (360)
.|+++||+|+ | ++|.+.++.+-..|++|++++++++.++.+.+. ++. . .. .|-.+.+.... .-
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV 84 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 6899999998 5 899999999999999999999998776665543 332 2 11 24444433222 14
Q ss_pred CCcCEEEEcCCC
Q 018158 247 RTLDFILDTVSA 258 (360)
Q Consensus 247 ~~~d~vid~~g~ 258 (360)
.++|+++++.|.
T Consensus 85 G~iD~lvnnAg~ 96 (256)
T 4fs3_A 85 GNIDGVYHSIAF 96 (256)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEecccc
Confidence 689999999873
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00089 Score=57.24 Aligned_cols=75 Identities=16% Similarity=0.177 Sum_probs=55.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE--eeCccHHHHHhc---CCCcCEEEEcCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF--ILSTNAMQMQAG---KRTLDFILDTVS 257 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~--v~~~~~~~~~~~---~~~~d~vid~~g 257 (360)
+++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.+....+ .|-.+.+..... ..++|++|+++|
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag 85 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA 85 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCc
Confidence 5789999999 9999999999999999999999998887766554432222 244444443332 246899999998
Q ss_pred C
Q 018158 258 A 258 (360)
Q Consensus 258 ~ 258 (360)
.
T Consensus 86 ~ 86 (244)
T 3d3w_A 86 V 86 (244)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00029 Score=61.83 Aligned_cols=99 Identities=15% Similarity=0.148 Sum_probs=70.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~d~v 252 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.++.... .|-.+.+..... ..++|++
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 107 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL 107 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999999 9999999999889999999999999988877766764322 244444332221 3579999
Q ss_pred EEcCCCcc-------------------------cHHHHHHHh--ccCCEEEEeCCCC
Q 018158 253 LDTVSAKH-------------------------SLGPILELL--KVNGTLSVVGAPE 282 (360)
Q Consensus 253 id~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~ 282 (360)
+++.|... ..+.++..| +.+|+++.++...
T Consensus 108 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~ 164 (277)
T 3gvc_A 108 VANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLA 164 (277)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGG
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchh
Confidence 99998421 123444444 3468999997654
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00023 Score=62.62 Aligned_cols=75 Identities=16% Similarity=0.101 Sum_probs=53.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CC-C-eE--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GA-D-EF--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~-~-~~--v~~~~~~~~~~~-------~~~ 248 (360)
.|+++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ +. . .. .|-.+.+..... ..+
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 111 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR 111 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5889999999 99999999999899999999999998776665433 21 1 12 244444333221 357
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|+++|.
T Consensus 112 iD~lvnnAG~ 121 (281)
T 4dry_A 112 LDLLVNNAGS 121 (281)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00062 Score=58.47 Aligned_cols=75 Identities=19% Similarity=0.267 Sum_probs=55.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhc-------CCCcCEEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAG-------KRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~-------~~~~d~vid 254 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+|...+ .|-.+.+..... ..++|++|+
T Consensus 4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn 83 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH 83 (245)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4789999999 9999999999999999999999999887777664563222 244444333221 347999999
Q ss_pred cCCC
Q 018158 255 TVSA 258 (360)
Q Consensus 255 ~~g~ 258 (360)
+.|.
T Consensus 84 ~Ag~ 87 (245)
T 1uls_A 84 YAGI 87 (245)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9984
|
| >3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C* | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00014 Score=62.85 Aligned_cols=96 Identities=16% Similarity=0.157 Sum_probs=69.2
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHc---CCCe-E-eeCccHHHHHhcCCCcCEEEE
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAF--GHHVTVISTSPSKEKEAKELL---GADE-F-ILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~--G~~V~~~~~~~~~~~~~~~~~---g~~~-~-v~~~~~~~~~~~~~~~d~vid 254 (360)
++++++||-+|+|. |..+..+++.. +.+|++++.+++..+.+++.+ |... + +...+.... .....+|+|+.
T Consensus 91 ~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~v~~ 168 (255)
T 3mb5_A 91 ISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEEENVDHVIL 168 (255)
T ss_dssp CCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCCCSEEEEEE
T ss_pred CCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCCCCcCEEEE
Confidence 44899999999976 88888999885 568999999999888887753 5322 1 212222111 11356999997
Q ss_pred cCCCc-ccHHHHHHHhccCCEEEEeC
Q 018158 255 TVSAK-HSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 255 ~~g~~-~~~~~~~~~l~~~G~~v~~g 279 (360)
..... ..+..+.+.|+++|+++.+.
T Consensus 169 ~~~~~~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 169 DLPQPERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp CSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 76654 36899999999999998763
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00045 Score=59.69 Aligned_cols=75 Identities=20% Similarity=0.161 Sum_probs=55.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~d~v 252 (360)
.++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.++.... .|-.+.+..... ..++|++
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL 83 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999999 9999999999999999999999999887776664553211 244444333222 2479999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|++.|.
T Consensus 84 v~nAg~ 89 (254)
T 1hdc_A 84 VNNAGI 89 (254)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999984
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00059 Score=58.74 Aligned_cols=75 Identities=19% Similarity=0.212 Sum_probs=55.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe--E--eeCccHHHHHhc------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE--F--ILSTNAMQMQAG------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~--~--v~~~~~~~~~~~------~~~~d~v 252 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.++... . .|..+.+..... ..++|++
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l 89 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSIL 89 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEE
Confidence 5789999999 999999999998899999999999888776655455322 1 244444333222 2579999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|+++|.
T Consensus 90 i~~Ag~ 95 (254)
T 2wsb_A 90 VNSAGI 95 (254)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 999984
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00045 Score=59.46 Aligned_cols=75 Identities=20% Similarity=0.237 Sum_probs=56.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC---eEeeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD---EFILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~~-------~~~~d~v 252 (360)
.++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.++.. ...|-.+.+..... ..++|++
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 87 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDIL 87 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999999 99999999999999999999999998887776655532 12344444333222 3589999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
+++.|.
T Consensus 88 v~nAg~ 93 (248)
T 3op4_A 88 VNNAGI 93 (248)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999984
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00067 Score=58.99 Aligned_cols=100 Identities=19% Similarity=0.208 Sum_probs=69.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~d~v 252 (360)
.++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.++.... .|-.+.+..... ..++|++
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l 84 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV 84 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence 5789999999 9999999999999999999999999888777665542211 244444333221 3479999
Q ss_pred EEcCCCcc-------------------------cHHHHHHHhccCCEEEEeCCCCC
Q 018158 253 LDTVSAKH-------------------------SLGPILELLKVNGTLSVVGAPEA 283 (360)
Q Consensus 253 id~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~~ 283 (360)
|++.|... ..+.+...++.+|+++.++....
T Consensus 85 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~ 140 (263)
T 2a4k_A 85 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG 140 (263)
T ss_dssp EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchh
Confidence 99987321 12233344433789999987543
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00059 Score=58.53 Aligned_cols=98 Identities=11% Similarity=0.124 Sum_probs=67.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCh--hHHHHHHHHcCCCeEe---eCccHHHHHhc--CCCcCEEEEc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSP--SKEKEAKELLGADEFI---LSTNAMQMQAG--KRTLDFILDT 255 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~--~~~~~~~~~~g~~~~v---~~~~~~~~~~~--~~~~d~vid~ 255 (360)
.|+++||+|+ +++|.+.++.+-..|++|++++++. +..+.+++ .|.+... |-.+....+.. ..++|+++++
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~-~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNN 86 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAK-DGGNASALLIDFADPLAAKDSFTDAGFDILVNN 86 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH-TTCCEEEEECCTTSTTTTTTSSTTTCCCEEEEC
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHH-hCCcEEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence 5899999999 9999999999999999999999875 34455555 6654332 33333222222 3579999999
Q ss_pred CCCc-------------------------ccHHHHHHHh-c--cCCEEEEeCCCC
Q 018158 256 VSAK-------------------------HSLGPILELL-K--VNGTLSVVGAPE 282 (360)
Q Consensus 256 ~g~~-------------------------~~~~~~~~~l-~--~~G~~v~~g~~~ 282 (360)
.|.. ...+.++..| + .+|+|+.+++..
T Consensus 87 AGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~ 141 (247)
T 4hp8_A 87 AGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLL 141 (247)
T ss_dssp CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred CCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechh
Confidence 9842 1134455555 3 368999998654
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00022 Score=62.39 Aligned_cols=95 Identities=18% Similarity=0.174 Sum_probs=64.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
++++++|+|+|++|.++++.+...|++|+++.|+.++.+.+.+.++....++..+.+.... .++|+++++++.... .
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~--~~~DivVn~t~~~~~-~ 194 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEG--HEFDLIINATSSGIS-G 194 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTT--CCCSEEEECCSCGGG-T
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhcc--CCCCEEEECCCCCCC-C
Confidence 5789999999999999999999999999999999998777766565310111111111111 589999999986532 0
Q ss_pred H----HHHHhccCCEEEEeCCC
Q 018158 264 P----ILELLKVNGTLSVVGAP 281 (360)
Q Consensus 264 ~----~~~~l~~~G~~v~~g~~ 281 (360)
. -...++++..++++...
T Consensus 195 ~~~~i~~~~l~~~~~v~D~~y~ 216 (271)
T 1nyt_A 195 DIPAIPSSLIHPGIYCYDMFYQ 216 (271)
T ss_dssp CCCCCCGGGCCTTCEEEESCCC
T ss_pred CCCCCCHHHcCCCCEEEEeccC
Confidence 0 11234556666666543
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00052 Score=57.81 Aligned_cols=96 Identities=11% Similarity=0.043 Sum_probs=67.4
Q ss_pred cEEEEEcC-ChHHHHHHHHHH-HcCCeEEEEeCChh-HHHHHHHHcCCC-eE--eeCccHHHHHhcCCCcCEEEEcCCCc
Q 018158 186 KRIGIVGL-GGLGHVAVKFGK-AFGHHVTVISTSPS-KEKEAKELLGAD-EF--ILSTNAMQMQAGKRTLDFILDTVSAK 259 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~-~~G~~V~~~~~~~~-~~~~~~~~~g~~-~~--v~~~~~~~~~~~~~~~d~vid~~g~~ 259 (360)
++++|+|+ |.+|..+++.+. ..|++|++++|+++ +.+.+.. .+.. .. .|..+.+.+...-.++|++|+++|..
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~ 84 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII-DHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES 84 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHH-TSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhcc-CCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence 56999999 999999888887 89999999999988 7666543 3322 12 24555555555557899999999863
Q ss_pred cc-HHHHHHHhccC--CEEEEeCCCC
Q 018158 260 HS-LGPILELLKVN--GTLSVVGAPE 282 (360)
Q Consensus 260 ~~-~~~~~~~l~~~--G~~v~~g~~~ 282 (360)
.. ...+++.++.. ++++.++...
T Consensus 85 n~~~~~~~~~~~~~~~~~iv~iSs~~ 110 (221)
T 3r6d_A 85 GSDMASIVKALSRXNIRRVIGVSMAG 110 (221)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred ChhHHHHHHHHHhcCCCeEEEEeece
Confidence 11 35556666543 5888886543
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.0005 Score=60.31 Aligned_cols=75 Identities=12% Similarity=0.123 Sum_probs=56.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~d~v 252 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.++.... .|-.+.+..... ..++|++
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l 83 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL 83 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 5689999999 9999999999999999999999999888777665654322 244443333222 3479999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|+++|.
T Consensus 84 v~~Ag~ 89 (281)
T 3m1a_A 84 VNNAGR 89 (281)
T ss_dssp EECCCC
T ss_pred EECCCc
Confidence 999984
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.001 Score=57.60 Aligned_cols=75 Identities=15% Similarity=0.186 Sum_probs=57.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~d~v 252 (360)
.++++||+|+ +++|.++++.+...|++|++++++.++.+.+.+.++.... .|-.+.+..... ..++|++
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 87 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDIL 87 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 5789999999 9999999999999999999999999988887776764322 243443332221 3479999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|+++|.
T Consensus 88 i~~Ag~ 93 (261)
T 3n74_A 88 VNNAGI 93 (261)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 999884
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00052 Score=59.77 Aligned_cols=75 Identities=16% Similarity=0.208 Sum_probs=55.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ |.... .|-.+.+..... ..++
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 82 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI 82 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 99999999999999999999999998877665543 43221 244444333221 3579
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++++++|.
T Consensus 83 D~lVnnAG~ 91 (264)
T 3tfo_A 83 DVLVNNAGV 91 (264)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999984
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.56 E-value=0.001 Score=51.33 Aligned_cols=76 Identities=18% Similarity=0.176 Sum_probs=56.5
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe-eCccHHHHHhc-CCCcCEEEEcCCCcc
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI-LSTNAMQMQAG-KRTLDFILDTVSAKH 260 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~-~~~~d~vid~~g~~~ 260 (360)
+.+++|+|+|.+|...++.+...|.+|+++++++++.+.+.+.+|...+. +..+.+..... ..++|+++.+++...
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~ 81 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEE 81 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCch
Confidence 46799999999999999999989999999999998888777645653222 33333333322 467999999998764
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00069 Score=58.46 Aligned_cols=75 Identities=16% Similarity=0.148 Sum_probs=55.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~d~v 252 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.++.... .|-.+.+..... ..++|++
T Consensus 5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 84 (253)
T 1hxh_A 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL 84 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999999 9999999999988999999999999887776665654322 233333332221 3468999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|++.|.
T Consensus 85 v~~Ag~ 90 (253)
T 1hxh_A 85 VNNAGI 90 (253)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999984
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00063 Score=59.39 Aligned_cols=75 Identities=20% Similarity=0.220 Sum_probs=57.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~d~v 252 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.++.... .|-.+.+..... ..++|++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 89 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV 89 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999999 9999999999999999999999999888777665664322 244444333222 3479999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
+++.|.
T Consensus 90 v~nAg~ 95 (271)
T 3tzq_B 90 DNNAAH 95 (271)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999884
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.55 E-value=0.0012 Score=57.41 Aligned_cols=75 Identities=20% Similarity=0.173 Sum_probs=54.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc----CCCeE---eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL----GADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ |.... .|-.+.+..... -.+
T Consensus 20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 99 (267)
T 1vl8_A 20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK 99 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999 99999999999999999999999988766554333 54322 244444333221 347
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|+++|.
T Consensus 100 iD~lvnnAg~ 109 (267)
T 1vl8_A 100 LDTVVNAAGI 109 (267)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999999984
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.0006 Score=59.14 Aligned_cols=75 Identities=19% Similarity=0.130 Sum_probs=55.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-e--EeeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-E--FILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~--~v~~~~~~~~~~~-------~~~~d~v 252 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.++.. . ..|-.+.+..... ..++|++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l 85 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL 85 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999999 99999999998889999999999988877665545422 1 1244444333222 2479999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|+++|.
T Consensus 86 v~~Ag~ 91 (260)
T 1nff_A 86 VNNAGI 91 (260)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999883
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00025 Score=63.17 Aligned_cols=75 Identities=11% Similarity=0.161 Sum_probs=55.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCC---hhHHHHHHHHcC----C-CeEeeCccHHHHHhcCCCcCEEEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTS---PSKEKEAKELLG----A-DEFILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~---~~~~~~~~~~~g----~-~~~v~~~~~~~~~~~~~~~d~vid 254 (360)
.+++++|+|+|++|.+++..+...|+ +|+++.|+ .++.+.+.+.++ . ..++...+.+.+.+.-..+|+||+
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiIIN 232 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTN 232 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEE
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEEE
Confidence 68999999999999999999999999 89999999 777666554333 2 133444443333333457999999
Q ss_pred cCCC
Q 018158 255 TVSA 258 (360)
Q Consensus 255 ~~g~ 258 (360)
|++.
T Consensus 233 aTp~ 236 (315)
T 3tnl_A 233 ATGV 236 (315)
T ss_dssp CSST
T ss_pred CccC
Confidence 9964
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.53 E-value=0.0012 Score=57.36 Aligned_cols=75 Identities=17% Similarity=0.201 Sum_probs=54.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc-----CCCeE---eeCccHHHHHhc-------CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL-----GADEF---ILSTNAMQMQAG-------KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~-----g~~~~---v~~~~~~~~~~~-------~~ 247 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ +.... .|-.+.+..... ..
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 91 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 91 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 5789999999 99999999988889999999999988766554332 43221 244444333222 34
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|++|++.|.
T Consensus 92 ~id~lv~nAg~ 102 (267)
T 1iy8_A 92 RIDGFFNNAGI 102 (267)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999999874
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.0008 Score=59.73 Aligned_cols=75 Identities=13% Similarity=0.098 Sum_probs=55.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ +.... .|-.+.+..... ..++
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 109 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGV 109 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 6889999999 99999999999999999999999998877665433 33221 244444333222 3479
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|+++|.
T Consensus 110 d~lvnnAg~ 118 (301)
T 3tjr_A 110 DVVFSNAGI 118 (301)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCc
Confidence 999999984
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=0.0012 Score=56.82 Aligned_cols=75 Identities=20% Similarity=0.243 Sum_probs=54.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ |.... .|-.+.+..... ..++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 85 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL 85 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 99999999999999999999999988776655433 43221 244444333221 3579
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|++.|.
T Consensus 86 d~lv~nAg~ 94 (247)
T 2jah_A 86 DILVNNAGI 94 (247)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999883
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0014 Score=56.86 Aligned_cols=99 Identities=14% Similarity=0.146 Sum_probs=66.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC-----C-eE--eeCccHHHHHhc-------CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA-----D-EF--ILSTNAMQMQAG-------KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~-----~-~~--v~~~~~~~~~~~-------~~ 247 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+.. . .. .|-.+.+..... ..
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 85 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 5789999999 9999999999999999999999998876654433321 1 11 244443333221 24
Q ss_pred CcCEEEEcCCCcc-----------------cHHHHHHHhcc-----CCEEEEeCCCC
Q 018158 248 TLDFILDTVSAKH-----------------SLGPILELLKV-----NGTLSVVGAPE 282 (360)
Q Consensus 248 ~~d~vid~~g~~~-----------------~~~~~~~~l~~-----~G~~v~~g~~~ 282 (360)
++|++|+++|... ..+.++..++. .|+++.++...
T Consensus 86 ~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~ 142 (267)
T 2gdz_A 86 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLA 142 (267)
T ss_dssp CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGG
T ss_pred CCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCcc
Confidence 7999999998421 12334455543 58999987643
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0015 Score=56.26 Aligned_cols=75 Identities=17% Similarity=0.263 Sum_probs=53.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc----C-CCeE--eeC--ccHHHHHh-------cC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL----G-ADEF--ILS--TNAMQMQA-------GK 246 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g-~~~~--v~~--~~~~~~~~-------~~ 246 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ + .... .|- .+.+.... ..
T Consensus 11 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (252)
T 3f1l_A 11 NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNY 90 (252)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhC
Confidence 6899999999 99999999998899999999999998876655433 2 1111 233 33322221 14
Q ss_pred CCcCEEEEcCCC
Q 018158 247 RTLDFILDTVSA 258 (360)
Q Consensus 247 ~~~d~vid~~g~ 258 (360)
.++|+++++.|.
T Consensus 91 g~id~lv~nAg~ 102 (252)
T 3f1l_A 91 PRLDGVLHNAGL 102 (252)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 579999999984
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0013 Score=57.38 Aligned_cols=75 Identities=19% Similarity=0.173 Sum_probs=55.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE--eeCccHHHHHhc-------CCCcCEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF--ILSTNAMQMQAG-------KRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~--v~~~~~~~~~~~-------~~~~d~vi 253 (360)
.++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+..... .|-.+.+..... ..++|++|
T Consensus 8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 87 (270)
T 1yde_A 8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV 87 (270)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 5789999999 9999999999999999999999999887776664542122 244444333222 34799999
Q ss_pred EcCCC
Q 018158 254 DTVSA 258 (360)
Q Consensus 254 d~~g~ 258 (360)
++.|.
T Consensus 88 ~nAg~ 92 (270)
T 1yde_A 88 NNAGH 92 (270)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 99874
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00075 Score=59.13 Aligned_cols=75 Identities=13% Similarity=0.146 Sum_probs=53.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCC-CeE----eeCccHHHHHhc-------CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGA-DEF----ILSTNAMQMQAG-------KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~-~~~----v~~~~~~~~~~~-------~~ 247 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+. .|. ..+ .|-.+.+..... ..
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 110 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 110 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 5789999999 9999999999988999999999998876655432 231 111 244444333221 24
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|++|+++|.
T Consensus 111 ~iD~vi~~Ag~ 121 (279)
T 1xg5_A 111 GVDICINNAGL 121 (279)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999983
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0021 Score=54.51 Aligned_cols=75 Identities=13% Similarity=0.111 Sum_probs=54.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE--eeCccHHHHHhc-------CCCcCEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF--ILSTNAMQMQAG-------KRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~--v~~~~~~~~~~~-------~~~~d~vi 253 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.++.... .|-.+.+..... ..++|++|
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV 83 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4678999999 9999999999999999999999998887776654542222 244443332221 24799999
Q ss_pred EcCCC
Q 018158 254 DTVSA 258 (360)
Q Consensus 254 d~~g~ 258 (360)
++.|.
T Consensus 84 ~~Ag~ 88 (234)
T 2ehd_A 84 NNAGV 88 (234)
T ss_dssp ECCCC
T ss_pred ECCCc
Confidence 99884
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0013 Score=56.94 Aligned_cols=75 Identities=19% Similarity=0.194 Sum_probs=55.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC---CCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG---ADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g---~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+. .... .|-.+.+..... ..++
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 84 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI 84 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 999999999999999999999999998877766443 2211 244444333221 3579
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|+++++.|.
T Consensus 85 d~lv~nAg~ 93 (257)
T 3imf_A 85 DILINNAAG 93 (257)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999983
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0012 Score=56.94 Aligned_cols=74 Identities=18% Similarity=0.198 Sum_probs=53.1
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc-------CCCcC
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG-------KRTLD 250 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~~~~d 250 (360)
++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ |.... .|-.+.+..... ..++|
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 81 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 578999999 99999999999999999999999988766554333 43211 244444333222 34799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|++.|.
T Consensus 82 ~lv~nAg~ 89 (256)
T 1geg_A 82 VIVNNAGV 89 (256)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999873
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0011 Score=57.93 Aligned_cols=75 Identities=20% Similarity=0.247 Sum_probs=53.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---C---CC-eE--eeCccHHHHHhc-------C
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---G---AD-EF--ILSTNAMQMQAG-------K 246 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g---~~-~~--v~~~~~~~~~~~-------~ 246 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ + .. .. .|-.+.+..... .
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (278)
T 1spx_A 5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 84 (278)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence 5788999999 99999999988889999999999988877665544 2 11 11 244444333222 2
Q ss_pred CCcCEEEEcCCC
Q 018158 247 RTLDFILDTVSA 258 (360)
Q Consensus 247 ~~~d~vid~~g~ 258 (360)
.++|++|++.|.
T Consensus 85 g~id~lv~~Ag~ 96 (278)
T 1spx_A 85 GKLDILVNNAGA 96 (278)
T ss_dssp SCCCEEEECCC-
T ss_pred CCCCEEEECCCC
Confidence 489999999874
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.0014 Score=55.53 Aligned_cols=73 Identities=18% Similarity=0.148 Sum_probs=54.2
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC---eEeeCccHHHHHh----cCCCcCEEEEcCC
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD---EFILSTNAMQMQA----GKRTLDFILDTVS 257 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~----~~~~~d~vid~~g 257 (360)
+++||+|+ |++|.+++..+...|++|++++++.++.+.+.+.++.. ...|-.+.+.... ....+|+++++.|
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~Ag 81 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAG 81 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECCC
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeCC
Confidence 46899999 99999999999999999999999999988887756532 1234444433332 2445699999998
Q ss_pred C
Q 018158 258 A 258 (360)
Q Consensus 258 ~ 258 (360)
.
T Consensus 82 ~ 82 (230)
T 3guy_A 82 S 82 (230)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.0012 Score=57.16 Aligned_cols=75 Identities=12% Similarity=0.114 Sum_probs=55.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-eE--eeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-EF--ILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~--v~~~~~~~~~~~-------~~~~d~v 252 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+... .. .|-.+.+..... ..++|++
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l 90 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL 90 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999999 99999999999999999999999998877766544321 11 244444333222 2479999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|+++|.
T Consensus 91 v~~Ag~ 96 (263)
T 3ak4_A 91 CANAGV 96 (263)
T ss_dssp EECCCC
T ss_pred EECCCc
Confidence 999983
|
| >3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0012 Score=53.24 Aligned_cols=98 Identities=13% Similarity=0.167 Sum_probs=70.0
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHH---cCCC-eE-eeCccHHHHHhcCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKEL---LGAD-EF-ILSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~---~g~~-~~-v~~~~~~~~~~~~~~~d~vid~ 255 (360)
.+++++||-+|+|. |..+..+++.. +.+|++++.+++..+.++++ .|.. .+ +..+..+........+|+|+..
T Consensus 23 ~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~ 101 (178)
T 3hm2_A 23 PKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIG 101 (178)
T ss_dssp CCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEEC
T ss_pred ccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEEC
Confidence 44899999999985 88899999887 56899999999988888764 3433 22 2222212223223689999976
Q ss_pred CCCc--ccHHHHHHHhccCCEEEEeCC
Q 018158 256 VSAK--HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 256 ~g~~--~~~~~~~~~l~~~G~~v~~g~ 280 (360)
.... ..+..+.+.|+++|+++....
T Consensus 102 ~~~~~~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 102 GGLTAPGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp C-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred CcccHHHHHHHHHHhcCCCCEEEEEee
Confidence 5433 368999999999999987643
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00089 Score=58.09 Aligned_cols=75 Identities=16% Similarity=0.065 Sum_probs=53.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhc-------CCCcCEEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAG-------KRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~-------~~~~d~vid 254 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.....+..+...+ .|-.+.+..... ..++|++++
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~ 105 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVH 105 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 5788999999 9999999999888999999999988765433333564322 244444332221 358999999
Q ss_pred cCCC
Q 018158 255 TVSA 258 (360)
Q Consensus 255 ~~g~ 258 (360)
++|.
T Consensus 106 nAg~ 109 (260)
T 3gem_A 106 NASE 109 (260)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 9983
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.0016 Score=56.45 Aligned_cols=75 Identities=12% Similarity=0.178 Sum_probs=54.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.+ |.... .|-.+.+..... ..++
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 107 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRC 107 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999999 99999999988889999999999998876665433 33211 244444332221 3579
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|+++|.
T Consensus 108 d~lv~~Ag~ 116 (262)
T 3rkr_A 108 DVLVNNAGV 116 (262)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCc
Confidence 999999985
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.0016 Score=57.20 Aligned_cols=75 Identities=17% Similarity=0.247 Sum_probs=55.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ |.... .|-.+.+..... ..++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL 106 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999 99999999999999999999999998877766644 22221 244443332221 3589
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++++++|.
T Consensus 107 D~lVnnAg~ 115 (283)
T 3v8b_A 107 DIVVANAGI 115 (283)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999984
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00094 Score=58.24 Aligned_cols=93 Identities=13% Similarity=0.099 Sum_probs=64.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCC--CeEeeCccHHHHHhcCCCcCEEEEcCCCcc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGA--DEFILSTNAMQMQAGKRTLDFILDTVSAKH 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~--~~~v~~~~~~~~~~~~~~~d~vid~~g~~~ 260 (360)
.+++++|+|+|++|.+++..+...|+ +|+++.|+.++.+.+.+.++. ...+...+. . ..++|+||+|++...
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l---~--~~~~DivInaTp~gm 193 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEAL---E--GQSFDIVVNATSASL 193 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGG---T--TCCCSEEEECSSGGG
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHh---c--ccCCCEEEECCCCCC
Confidence 58999999999999999999999997 899999999988877776664 222322221 1 168999999997531
Q ss_pred cH---HHHHHHhccCCEEEEeCCC
Q 018158 261 SL---GPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 261 ~~---~~~~~~l~~~G~~v~~g~~ 281 (360)
.- ..-.+.++++..++++-..
T Consensus 194 ~~~~~~i~~~~l~~~~~V~DlvY~ 217 (272)
T 3pwz_A 194 TADLPPLPADVLGEAALAYELAYG 217 (272)
T ss_dssp GTCCCCCCGGGGTTCSEEEESSCS
T ss_pred CCCCCCCCHHHhCcCCEEEEeecC
Confidence 00 0012456677666666443
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0014 Score=56.99 Aligned_cols=75 Identities=13% Similarity=0.194 Sum_probs=55.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ +++|.++++.+...|++|++++++.++.+.+.+.+ |.... .|-.+.+..... ..++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 89 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRV 89 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 6899999999 99999999999999999999999988876665533 43222 244444333221 3579
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|++.|.
T Consensus 90 d~lv~nAg~ 98 (264)
T 3ucx_A 90 DVVINNAFR 98 (264)
T ss_dssp SEEEECCCS
T ss_pred cEEEECCCC
Confidence 999999864
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00088 Score=60.02 Aligned_cols=75 Identities=13% Similarity=0.128 Sum_probs=54.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CC--Ce---EeeCccHHHHHhc-------CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GA--DE---FILSTNAMQMQAG-------KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~--~~---~v~~~~~~~~~~~-------~~ 247 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +. .. ..|-.+.+.+... ..
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG 86 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence 5789999999 99999999988889999999999998876665433 22 11 1244444333222 35
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|++|++.|.
T Consensus 87 ~id~lv~nAg~ 97 (319)
T 3ioy_A 87 PVSILCNNAGV 97 (319)
T ss_dssp CEEEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999999983
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00059 Score=60.46 Aligned_cols=95 Identities=16% Similarity=0.080 Sum_probs=67.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCC--eEeeCccHHHHHhcCCCcCEEEEcCCCcc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGAD--EFILSTNAMQMQAGKRTLDFILDTVSAKH 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~~~~~~~~~~d~vid~~g~~~ 260 (360)
.+++++|+|+|++|.+++..+...|+ +|+++.|+.++.+.+.+.++.. .+++. +...+.-.++|+||+|++...
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~---~~~~~~~~~aDivIn~t~~~~ 216 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSL---AEAETRLAEYDIIINTTSVGM 216 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECH---HHHHHTGGGCSEEEECSCTTC
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeH---HHHHhhhccCCEEEECCCCCC
Confidence 57899999999999999999999998 8999999999887777667652 23222 223333467999999998643
Q ss_pred c-----HHHHHHHhccCCEEEEeCCC
Q 018158 261 S-----LGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 261 ~-----~~~~~~~l~~~G~~v~~g~~ 281 (360)
. .......++++..++++...
T Consensus 217 ~~~~~~~~i~~~~l~~~~~v~D~~y~ 242 (297)
T 2egg_A 217 HPRVEVQPLSLERLRPGVIVSDIIYN 242 (297)
T ss_dssp SSCCSCCSSCCTTCCTTCEEEECCCS
T ss_pred CCCCCCCCCCHHHcCCCCEEEEcCCC
Confidence 1 00012456677777777653
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00091 Score=57.70 Aligned_cols=75 Identities=17% Similarity=0.113 Sum_probs=54.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc------CCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG------KRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~------~~~~d 250 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ |.... .|-.+.+..... ..++|
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id 85 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLE 85 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCce
Confidence 5789999999 99999999999999999999999988776665533 43211 244443332221 15799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
+++++.|.
T Consensus 86 ~lv~nAg~ 93 (252)
T 3h7a_A 86 VTIFNVGA 93 (252)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99999984
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0015 Score=56.07 Aligned_cols=75 Identities=16% Similarity=0.169 Sum_probs=53.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHcCCCeE---eeCccHHHHHhc-------CCCcCE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSP-SKEKEAKELLGADEF---ILSTNAMQMQAG-------KRTLDF 251 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~-~~~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~d~ 251 (360)
.++++||+|+ |++|.++++.+...|++|++++++. ++.+...+..|.... .|-.+.+..... ..++|+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 85 (249)
T 2ew8_A 6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI 85 (249)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence 5789999999 9999999999999999999999987 665532222564322 244444333222 357999
Q ss_pred EEEcCCC
Q 018158 252 ILDTVSA 258 (360)
Q Consensus 252 vid~~g~ 258 (360)
+|++.|.
T Consensus 86 lv~nAg~ 92 (249)
T 2ew8_A 86 LVNNAGI 92 (249)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999984
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00047 Score=59.90 Aligned_cols=97 Identities=13% Similarity=0.011 Sum_probs=73.6
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+...+...|++.+.-- .|++++|+|. +.+|..+++++...|++|+++.+....++
T Consensus 139 ~~~PcTp~gv~~lL~~~~i~l--~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~----------------- 199 (286)
T 4a5o_A 139 LLRPCTPKGIMTLLASTGADL--YGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLA----------------- 199 (286)
T ss_dssp SSCCHHHHHHHHHHHHTTCCC--TTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHH-----------------
T ss_pred CCCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHH-----------------
Confidence 456777777788888776433 7999999998 56999999999999999999876432222
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+.-+.+|++|.++|....+.. ++++++..++++|...
T Consensus 200 ----~~~~~ADIVI~Avg~p~~I~~--~~vk~GavVIDvgi~~ 236 (286)
T 4a5o_A 200 ----DHVSRADLVVVAAGKPGLVKG--EWIKEGAIVIDVGINR 236 (286)
T ss_dssp ----HHHHTCSEEEECCCCTTCBCG--GGSCTTCEEEECCSCS
T ss_pred ----HHhccCCEEEECCCCCCCCCH--HHcCCCeEEEEecccc
Confidence 123468999999987644332 6789999999999764
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0015 Score=56.06 Aligned_cols=75 Identities=20% Similarity=0.206 Sum_probs=53.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIST-SPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~-~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|.++++.+...|++|+++++ ++++.+.+.+. .+.... .|-.+.+..... ..+
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ 82 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4788999999 99999999999999999999998 77766554332 243222 244444333222 247
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|++.|.
T Consensus 83 id~lv~nAg~ 92 (246)
T 2uvd_A 83 VDILVNNAGV 92 (246)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0015 Score=56.60 Aligned_cols=75 Identities=13% Similarity=0.166 Sum_probs=54.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ |.... .|-.+.+..... -.++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 85 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI 85 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999 99999999999999999999999988776654433 43221 244444332221 3479
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|++.|.
T Consensus 86 d~lv~nAg~ 94 (262)
T 1zem_A 86 DFLFNNAGY 94 (262)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999874
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0016 Score=56.52 Aligned_cols=75 Identities=16% Similarity=0.147 Sum_probs=54.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---C-CCeE---eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---G-ADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g-~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ + .... .|-.+.+..... ..+
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG 88 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 5789999999 99999999999999999999999998876655433 2 1111 244443332221 347
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|+++++.|.
T Consensus 89 id~lvnnAg~ 98 (262)
T 3pk0_A 89 IDVVCANAGV 98 (262)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999983
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0019 Score=56.05 Aligned_cols=75 Identities=15% Similarity=0.177 Sum_probs=54.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH----cCCC-eE---eeCccHHHHHhc-------CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL----LGAD-EF---ILSTNAMQMQAG-------KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~----~g~~-~~---v~~~~~~~~~~~-------~~ 247 (360)
.++++||+|+ +++|.++++.+...|++|++++++.++.+.+.+. .+.. .. .|-.+.+..... ..
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 86 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG 86 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 5789999999 9999999999999999999999998877665543 2322 11 244444332221 35
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|+++++.|.
T Consensus 87 ~id~lvnnAg~ 97 (265)
T 3lf2_A 87 CASILVNNAGQ 97 (265)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999984
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0013 Score=57.51 Aligned_cols=75 Identities=16% Similarity=0.224 Sum_probs=54.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~-------~~~~~ 249 (360)
.|+++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ |.... .|-.+.+.... ...++
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 104 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDV 104 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence 5789999999 99999999999999999999999988776655433 43322 23333332222 14579
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++++++|.
T Consensus 105 D~lv~nAg~ 113 (271)
T 4ibo_A 105 DILVNNAGI 113 (271)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999984
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0017 Score=56.62 Aligned_cols=98 Identities=15% Similarity=0.172 Sum_probs=65.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTS-PSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~-~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|.++++.+...|++|++++++ .++.+.+.+. .|.... .|-.+.+..... ..+
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 109 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG 109 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 6889999999 999999999999999999998654 4444443332 354322 244443332221 347
Q ss_pred cCEEEEcCCCc-------------------------ccHHHHHHHhccCCEEEEeCCC
Q 018158 249 LDFILDTVSAK-------------------------HSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 249 ~d~vid~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
+|++|+++|.. ...+.+...|+++|+++.++..
T Consensus 110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~ 167 (271)
T 3v2g_A 110 LDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSN 167 (271)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCG
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeCh
Confidence 99999999842 1134555667778999999764
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0021 Score=56.77 Aligned_cols=99 Identities=18% Similarity=0.161 Sum_probs=66.7
Q ss_pred CCcEEEEEcC-Ch--HHHHHHHHHHHcCCeEEEEeCChhHHHHH---HHHcCCCeE--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GG--LGHVAVKFGKAFGHHVTVISTSPSKEKEA---KELLGADEF--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~--vG~~aiqla~~~G~~V~~~~~~~~~~~~~---~~~~g~~~~--v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |. +|.++++.+...|++|++++++++..+.+ .+..+.... .|-.+.+..... ..+
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 109 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGK 109 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 6899999998 76 99999999989999999999986543333 222342222 244444333222 357
Q ss_pred cCEEEEcCCCcc-----------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 249 LDFILDTVSAKH-----------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 249 ~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+|++|+++|... ..+.++..|+++|+++.++...
T Consensus 110 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~ 172 (293)
T 3grk_A 110 LDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYG 172 (293)
T ss_dssp CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGG
T ss_pred CCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehh
Confidence 999999998431 1344556667789999987644
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0012 Score=58.02 Aligned_cols=98 Identities=17% Similarity=0.150 Sum_probs=65.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhH-HHH----HHHHcCCCeE---eeCccHHHHHhc-------CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSK-EKE----AKELLGADEF---ILSTNAMQMQAG-------KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~-~~~----~~~~~g~~~~---v~~~~~~~~~~~-------~~ 247 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++ .+. +.+ .|.... .|-.+.+..... ..
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 106 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKK-NGSDAACVKANVGVVEDIVRMFEEAVKIFG 106 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHH-hCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5789999999 999999999999999999999988653 222 223 454322 233333322211 34
Q ss_pred CcCEEEEcCCCcc-------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 248 TLDFILDTVSAKH-------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 248 ~~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
++|++|++.|... ..+.+...|+.+|+++.++...
T Consensus 107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~ 166 (283)
T 1g0o_A 107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSIT 166 (283)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGG
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechh
Confidence 7999999998421 1244455566679999997643
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00071 Score=59.64 Aligned_cols=75 Identities=11% Similarity=0.135 Sum_probs=56.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc----CCC-eEeeCccHHHHHhcCCCcCEEEEcCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL----GAD-EFILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g~~-~~v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
++++++|+|+ |++|.+++..+...|++|++++|+.++.+.+.+.+ +.. ...|..+.+.....-..+|++++++|
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~ag 197 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGA 197 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECCC
Confidence 6889999996 99999999999999999999999988776655433 322 22355454445455567999999997
Q ss_pred C
Q 018158 258 A 258 (360)
Q Consensus 258 ~ 258 (360)
.
T Consensus 198 ~ 198 (287)
T 1lu9_A 198 I 198 (287)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0007 Score=63.83 Aligned_cols=91 Identities=18% Similarity=0.245 Sum_probs=71.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL- 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~- 262 (360)
.|+++.|+|.|.+|..+++.++.+|++|++++++..+...+.. .|.. +. .+.+.-...|+|+.+++....+
T Consensus 276 ~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~-~G~~-~~------~l~ell~~aDiVi~~~~t~~lI~ 347 (494)
T 3d64_A 276 AGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAM-EGYR-VV------TMEYAADKADIFVTATGNYHVIN 347 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHT-TTCE-EC------CHHHHTTTCSEEEECSSSSCSBC
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHH-cCCE-eC------CHHHHHhcCCEEEECCCcccccC
Confidence 6899999999999999999999999999999999876534444 5543 21 2334456899999998655444
Q ss_pred HHHHHHhccCCEEEEeCCCC
Q 018158 263 GPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~~~ 282 (360)
...+..|+++..++++|...
T Consensus 348 ~~~l~~MK~gAilINvgrg~ 367 (494)
T 3d64_A 348 HDHMKAMRHNAIVCNIGHFD 367 (494)
T ss_dssp HHHHHHCCTTEEEEECSSSS
T ss_pred HHHHhhCCCCcEEEEcCCCc
Confidence 57889999999999998643
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0017 Score=56.24 Aligned_cols=98 Identities=11% Similarity=0.052 Sum_probs=67.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHH---HHHcCCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEA---KELLGADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~---~~~~g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.|+++||+|+ +++|.+.++.+-..|++|++++++.++.+.+ .+ .+.... .|-.+.+..... -.++
T Consensus 6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i 84 (258)
T 4gkb_A 6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQ-RQPRATYLPVELQDDAQCRDAVAQTIATFGRL 84 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHH-HCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHh-cCCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 6899999999 9999999999889999999999987654333 33 343222 244444332221 4679
Q ss_pred CEEEEcCCCc------------------------ccHHHHHHHhc-cCCEEEEeCCCC
Q 018158 250 DFILDTVSAK------------------------HSLGPILELLK-VNGTLSVVGAPE 282 (360)
Q Consensus 250 d~vid~~g~~------------------------~~~~~~~~~l~-~~G~~v~~g~~~ 282 (360)
|+++++.|.. ...+.++..|+ .+|+|+.+++..
T Consensus 85 DiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~ 142 (258)
T 4gkb_A 85 DGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKT 142 (258)
T ss_dssp CEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTH
T ss_pred CEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehh
Confidence 9999999842 11344555664 479999998654
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0013 Score=58.26 Aligned_cols=75 Identities=21% Similarity=0.258 Sum_probs=53.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CC-Ce-E--eeCccH-HHHHh-------cCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GA-DE-F--ILSTNA-MQMQA-------GKR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~-~~-~--v~~~~~-~~~~~-------~~~ 247 (360)
.++++||+|+ |++|.++++.+...|++|++++|+.++.+.+.+.+ +. .. . .|-.+. +.... ...
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g 90 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFG 90 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCC
Confidence 6789999999 99999999988889999999999998766654433 21 11 1 233332 22211 135
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|++|+++|.
T Consensus 91 ~iD~lv~nAg~ 101 (311)
T 3o26_A 91 KLDILVNNAGV 101 (311)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 89999999985
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.002 Score=56.22 Aligned_cols=75 Identities=20% Similarity=0.299 Sum_probs=54.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC--C-eE--eeCccHHHHHhc-------CCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA--D-EF--ILSTNAMQMQAG-------KRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~--~-~~--v~~~~~~~~~~~-------~~~~d 250 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.++. . .. .|-.+.+..... ..++|
T Consensus 15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 94 (278)
T 2bgk_A 15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD 94 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999999 9999999998888999999999998876665554542 1 11 244444333222 24799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|++.|.
T Consensus 95 ~li~~Ag~ 102 (278)
T 2bgk_A 95 IMFGNVGV 102 (278)
T ss_dssp EEEECCCC
T ss_pred EEEECCcc
Confidence 99999874
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0014 Score=56.79 Aligned_cols=75 Identities=15% Similarity=0.091 Sum_probs=53.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc-----CCC-eE--eeCccHHHHHhc------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL-----GAD-EF--ILSTNAMQMQAG------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~-----g~~-~~--v~~~~~~~~~~~------~~~ 248 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ +.. .. .|-.+.+..... ..+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG 85 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 5789999999 99999999998889999999999988766554433 212 11 244444333222 113
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|++.|.
T Consensus 86 id~lv~~Ag~ 95 (260)
T 2z1n_A 86 ADILVYSTGG 95 (260)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0014 Score=57.49 Aligned_cols=75 Identities=19% Similarity=0.139 Sum_probs=55.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ +.... .|-.+.+..... ..++
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 86 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL 86 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 99999999999999999999999998877776644 22222 233333332221 3579
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|+++|.
T Consensus 87 D~lvnnAg~ 95 (280)
T 3tox_A 87 DTAFNNAGA 95 (280)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999983
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0014 Score=56.69 Aligned_cols=75 Identities=12% Similarity=0.133 Sum_probs=54.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+. .|.... .|-.+.+..... ..++
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 90 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKI 90 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 9999999998888999999999998877665543 343322 244443332221 3589
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|+++++.|.
T Consensus 91 d~lv~nAg~ 99 (256)
T 3gaf_A 91 TVLVNNAGG 99 (256)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999984
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00071 Score=58.88 Aligned_cols=75 Identities=20% Similarity=0.203 Sum_probs=54.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH----cCCCeE---eeCccHHHHHh-------cCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL----LGADEF---ILSTNAMQMQA-------GKRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~----~g~~~~---v~~~~~~~~~~-------~~~~ 248 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+. .+.... .|-.+.+.... ...+
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 98 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGG 98 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999 9999999999999999999999998877665443 243222 23333322211 1358
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|++.|.
T Consensus 99 id~lv~nAg~ 108 (266)
T 4egf_A 99 LDVLVNNAGI 108 (266)
T ss_dssp CSEEEEECCC
T ss_pred CCEEEECCCc
Confidence 9999999884
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.36 E-value=0.003 Score=55.07 Aligned_cols=75 Identities=11% Similarity=0.150 Sum_probs=54.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|..++..+...|++|++++++.++.+.+.+.+ |.... .|-.+.+..... ..++
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 109 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV 109 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence 5789999999 99999999999999999999999988766554432 43221 243343322221 3479
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|+++|.
T Consensus 110 D~li~~Ag~ 118 (272)
T 1yb1_A 110 SILVNNAGV 118 (272)
T ss_dssp SEEEECCCC
T ss_pred cEEEECCCc
Confidence 999999984
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00044 Score=60.06 Aligned_cols=97 Identities=11% Similarity=0.135 Sum_probs=72.9
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+...+...+++...-- .|++++|+|. +.+|..+++++...|++|++..+....+
T Consensus 139 ~~~PcTp~gv~~lL~~~~i~l--~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L------------------ 198 (285)
T 3l07_A 139 CLESCTPKGIMTMLREYGIKT--EGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDL------------------ 198 (285)
T ss_dssp CCCCHHHHHHHHHHHHTTCCC--TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSH------------------
T ss_pred CCCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhH------------------
Confidence 456777777788887776433 7999999999 5589999999999999999887543221
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.+.-+.+|++|.++|....+.. ++++++..++++|...
T Consensus 199 ---~~~~~~ADIVI~Avg~p~~I~~--~~vk~GavVIDvgi~~ 236 (285)
T 3l07_A 199 ---KSHTTKADILIVAVGKPNFITA--DMVKEGAVVIDVGINH 236 (285)
T ss_dssp ---HHHHTTCSEEEECCCCTTCBCG--GGSCTTCEEEECCCEE
T ss_pred ---HHhcccCCEEEECCCCCCCCCH--HHcCCCcEEEEecccC
Confidence 1224578999999987644322 5789999999998754
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.0013 Score=57.19 Aligned_cols=75 Identities=13% Similarity=0.091 Sum_probs=53.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---C-CCeE----eeCccHHHHHhc---CCCcCE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---G-ADEF----ILSTNAMQMQAG---KRTLDF 251 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g-~~~~----v~~~~~~~~~~~---~~~~d~ 251 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ + ...+ .|..+.+..... -.++|+
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~ 88 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDI 88 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCE
Confidence 5789999999 99999999999899999999999988766554432 1 1111 233443333222 357999
Q ss_pred EEEcCCC
Q 018158 252 ILDTVSA 258 (360)
Q Consensus 252 vid~~g~ 258 (360)
++++.|.
T Consensus 89 lv~nAg~ 95 (267)
T 3t4x_A 89 LINNLGI 95 (267)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999984
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=97.36 E-value=0.0015 Score=57.15 Aligned_cols=74 Identities=19% Similarity=0.200 Sum_probs=54.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc----CCCeE---eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL----GADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ |.... .|-.+.+..... ..+
T Consensus 26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 105 (277)
T 4fc7_A 26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGR 105 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 6899999999 99999999999999999999999988765554333 43322 244444332221 358
Q ss_pred cCEEEEcCC
Q 018158 249 LDFILDTVS 257 (360)
Q Consensus 249 ~d~vid~~g 257 (360)
+|+++++.|
T Consensus 106 id~lv~nAg 114 (277)
T 4fc7_A 106 IDILINCAA 114 (277)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCc
Confidence 999999998
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=97.36 E-value=0.0012 Score=57.08 Aligned_cols=75 Identities=12% Similarity=0.129 Sum_probs=53.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhH-HHHHHHHc----CCCeE---eeCccHHHHHhc-------CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSK-EKEAKELL----GADEF---ILSTNAMQMQAG-------KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~-~~~~~~~~----g~~~~---v~~~~~~~~~~~-------~~ 247 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++ .+.+.+.+ |.... .|-.+.+..... ..
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 82 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 5788999999 999999999999999999999998776 55544323 43322 244443333222 24
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|++|++.|.
T Consensus 83 ~iD~lv~~Ag~ 93 (260)
T 1x1t_A 83 RIDILVNNAGI 93 (260)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999984
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0013 Score=57.30 Aligned_cols=75 Identities=15% Similarity=0.142 Sum_probs=54.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCC---eEeeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGAD---EFILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+. .|.. ...|-.+.+..... ..++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGAL 106 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 9999999999889999999999998877655443 2322 12344444333222 3479
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|+++|.
T Consensus 107 D~lvnnAg~ 115 (270)
T 3ftp_A 107 NVLVNNAGI 115 (270)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999983
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00094 Score=58.50 Aligned_cols=75 Identities=17% Similarity=0.133 Sum_probs=54.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC-eE--eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD-EF--ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~~--v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ |.. .. .|-.+.+..... ..++
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 110 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGI 110 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 99999999999999999999999988766654433 322 11 244444333222 3479
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|+++|.
T Consensus 111 D~lvnnAg~ 119 (276)
T 3r1i_A 111 DIAVCNAGI 119 (276)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999984
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0016 Score=56.03 Aligned_cols=75 Identities=19% Similarity=0.215 Sum_probs=53.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+. .+.... .|-.+.+..... ..++
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 89 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV 89 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999999 9999999999888999999999998876554432 243221 243443333222 2479
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|+++|.
T Consensus 90 d~vi~~Ag~ 98 (255)
T 1fmc_A 90 DILVNNAGG 98 (255)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999874
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0016 Score=56.45 Aligned_cols=88 Identities=20% Similarity=0.202 Sum_probs=65.3
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc----
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH---- 260 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~---- 260 (360)
+++++|+|+|++|.+++..+...|.+|+++.|+.++.+.+.+ +|.. .....+ .. .+|+||+|++...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~-~~~~-~~~~~~------l~-~~DiVInaTp~Gm~~~~ 188 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQR-LGCD-CFMEPP------KS-AFDLIINATSASLHNEL 188 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHH-HTCE-EESSCC------SS-CCSEEEECCTTCCCCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-CCCe-EecHHH------hc-cCCEEEEcccCCCCCCC
Confidence 789999999999999999999999889999999998877774 8843 322222 12 7999999987431
Q ss_pred cH--HHHHHHhccCCEEEEeCCC
Q 018158 261 SL--GPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 261 ~~--~~~~~~l~~~G~~v~~g~~ 281 (360)
.+ ..+...++++..++++-..
T Consensus 189 ~l~~~~l~~~l~~~~~v~D~vY~ 211 (269)
T 3phh_A 189 PLNKEVLKGYFKEGKLAYDLAYG 211 (269)
T ss_dssp SSCHHHHHHHHHHCSEEEESCCS
T ss_pred CCChHHHHhhCCCCCEEEEeCCC
Confidence 12 2223367888888877544
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0004 Score=60.32 Aligned_cols=96 Identities=19% Similarity=0.171 Sum_probs=72.7
Q ss_pred cccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH
Q 018158 162 PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240 (360)
Q Consensus 162 ~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 240 (360)
.+||+...+...+++...-- .|++++|+|. +.+|..+++++...|++|+++.+....++
T Consensus 139 ~~PcTp~gv~~lL~~~~i~l--~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~------------------ 198 (285)
T 3p2o_A 139 FLPCTPLGVMKLLKAYEIDL--EGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLS------------------ 198 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCCC--TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH------------------
T ss_pred CCCCCHHHHHHHHHHhCCCC--CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHH------------------
Confidence 46777777777887776433 7999999999 55899999999999999999886532221
Q ss_pred HHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 241 QMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 241 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+.-+.+|++|.++|....+.. ++++++..++++|...
T Consensus 199 ---~~~~~ADIVI~Avg~p~~I~~--~~vk~GavVIDVgi~~ 235 (285)
T 3p2o_A 199 ---LYTRQADLIIVAAGCVNLLRS--DMVKEGVIVVDVGINR 235 (285)
T ss_dssp ---HHHTTCSEEEECSSCTTCBCG--GGSCTTEEEEECCCEE
T ss_pred ---HHhhcCCEEEECCCCCCcCCH--HHcCCCeEEEEeccCc
Confidence 223578999999997644322 6788998889998753
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.34 E-value=0.003 Score=54.48 Aligned_cols=73 Identities=19% Similarity=0.233 Sum_probs=52.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe--eCccHHHHHhc-------CCCcCEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI--LSTNAMQMQAG-------KRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v--~~~~~~~~~~~-------~~~~d~vi 253 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++ +.+.+.++. ..+ |-.+.+..... ..++|++|
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv 82 (256)
T 2d1y_A 5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV 82 (256)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 5789999999 999999999998999999999998877 444443542 222 43443322221 34799999
Q ss_pred EcCCC
Q 018158 254 DTVSA 258 (360)
Q Consensus 254 d~~g~ 258 (360)
++.|.
T Consensus 83 ~~Ag~ 87 (256)
T 2d1y_A 83 NNAAI 87 (256)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 99984
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0016 Score=54.52 Aligned_cols=91 Identities=23% Similarity=0.311 Sum_probs=63.8
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhcCCCcCEEEEcCCCc-----
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAGKRTLDFILDTVSAK----- 259 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g~~----- 259 (360)
+|||+|+ |.+|..+++.+...|.+|++++|++++...+. -+...+ .|..+.+. ..-.++|+||+++|..
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~ 77 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDLTL--SDLSDQNVVVDAYGISPDEAE 77 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTTTTT
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccChhh--hhhcCCCEEEECCcCCccccc
Confidence 5899999 99999999999999999999999987766543 122222 13222222 2346799999999863
Q ss_pred ---ccHHHHHHHhccC--CEEEEeCCC
Q 018158 260 ---HSLGPILELLKVN--GTLSVVGAP 281 (360)
Q Consensus 260 ---~~~~~~~~~l~~~--G~~v~~g~~ 281 (360)
.....+++.++.. ++++.++..
T Consensus 78 ~~~~~~~~l~~a~~~~~~~~~v~~SS~ 104 (221)
T 3ew7_A 78 KHVTSLDHLISVLNGTVSPRLLVVGGA 104 (221)
T ss_dssp SHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred hHHHHHHHHHHHHHhcCCceEEEEecc
Confidence 1235666777654 688888654
|
| >1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3 | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00079 Score=63.20 Aligned_cols=91 Identities=19% Similarity=0.217 Sum_probs=71.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL- 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~- 262 (360)
.|++|.|+|.|.+|..+++.++.+|++|++++++..+...+.. .|.. +. ...+.-...|+|+.+.+....+
T Consensus 256 ~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~-~g~~-~~------~l~ell~~aDiVi~~~~t~~lI~ 327 (479)
T 1v8b_A 256 SGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVM-EGFN-VV------TLDEIVDKGDFFITCTGNVDVIK 327 (479)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHT-TTCE-EC------CHHHHTTTCSEEEECCSSSSSBC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHH-cCCE-ec------CHHHHHhcCCEEEECCChhhhcC
Confidence 7899999999999999999999999999999999876544544 5642 21 2333456899999997655444
Q ss_pred HHHHHHhccCCEEEEeCCCC
Q 018158 263 GPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~~~ 282 (360)
...+..|+++..++++|...
T Consensus 328 ~~~l~~MK~gailiNvgrg~ 347 (479)
T 1v8b_A 328 LEHLLKMKNNAVVGNIGHFD 347 (479)
T ss_dssp HHHHTTCCTTCEEEECSSTT
T ss_pred HHHHhhcCCCcEEEEeCCCC
Confidence 47788999999999998643
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0011 Score=57.56 Aligned_cols=99 Identities=12% Similarity=0.129 Sum_probs=64.5
Q ss_pred CCcEEEEEcC-Ch--HHHHHHHHHHHcCCeEEEEeCChhHHHHHHH---HcCC-C-eE--eeCccHHHHHhc-------C
Q 018158 184 AKKRIGIVGL-GG--LGHVAVKFGKAFGHHVTVISTSPSKEKEAKE---LLGA-D-EF--ILSTNAMQMQAG-------K 246 (360)
Q Consensus 184 ~~~~vlI~Ga-g~--vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~---~~g~-~-~~--v~~~~~~~~~~~-------~ 246 (360)
.++++||+|+ |. +|.++++.+...|++|++++++++..+.+.+ .++. . .. .|-.+.+..... .
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV 85 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 5789999998 77 9999998888899999999988754444333 2332 1 11 233333222221 3
Q ss_pred CCcCEEEEcCCCcc-----------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 247 RTLDFILDTVSAKH-----------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 247 ~~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.++|++++++|... ..+.+...++++|+++.++...
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~ 150 (266)
T 3oig_A 86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLG 150 (266)
T ss_dssp SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGG
T ss_pred CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccc
Confidence 57999999987421 1233444556678999987654
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00063 Score=59.54 Aligned_cols=98 Identities=19% Similarity=0.189 Sum_probs=73.2
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+...+...+++...-- .|++++|+|. +.+|..+++++...|++|+++.+....++.
T Consensus 143 ~~~PcTp~gv~~lL~~~~i~l--~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~l---------------- 204 (300)
T 4a26_A 143 PFTPCTAKGVIVLLKRCGIEM--AGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTEDM---------------- 204 (300)
T ss_dssp SCCCHHHHHHHHHHHHHTCCC--TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHHH----------------
T ss_pred CCCCCCHHHHHHHHHHcCCCC--CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCchh----------------
Confidence 356777777788887766433 7999999999 558999999999999999999874433320
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
.+.-+.+|++|.++|....+.. ++++++..++++|..
T Consensus 205 ---~~~~~~ADIVI~Avg~p~~I~~--~~vk~GavVIDvgi~ 241 (300)
T 4a26_A 205 ---IDYLRTADIVIAAMGQPGYVKG--EWIKEGAAVVDVGTT 241 (300)
T ss_dssp ---HHHHHTCSEEEECSCCTTCBCG--GGSCTTCEEEECCCE
T ss_pred ---hhhhccCCEEEECCCCCCCCcH--HhcCCCcEEEEEecc
Confidence 0123468999999997644332 568999999999864
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0019 Score=55.74 Aligned_cols=74 Identities=20% Similarity=0.183 Sum_probs=53.3
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHhc-------CCCcCE
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAF--GHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQAG-------KRTLDF 251 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~--G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~d~ 251 (360)
++++||+|+ +++|.++++.+... |++|+.++++.++.+.+.+.+|.... .|-.+.+..... ..++|+
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 81 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS 81 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence 578999999 99999888766665 47899999999988887776664322 244444333221 358999
Q ss_pred EEEcCCC
Q 018158 252 ILDTVSA 258 (360)
Q Consensus 252 vid~~g~ 258 (360)
++++.|.
T Consensus 82 lvnnAg~ 88 (254)
T 3kzv_A 82 LVANAGV 88 (254)
T ss_dssp EEEECCC
T ss_pred EEECCcc
Confidence 9999984
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0023 Score=56.02 Aligned_cols=75 Identities=17% Similarity=0.182 Sum_probs=53.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-------------ChhHHHHHHHH---cCCCeE---eeCccHHHHH
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIST-------------SPSKEKEAKEL---LGADEF---ILSTNAMQMQ 243 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~-------------~~~~~~~~~~~---~g~~~~---v~~~~~~~~~ 243 (360)
.++++||+|+ +++|.++++.+...|++|+++++ +.++.+.+.+. .|.... .|-.+.+...
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 93 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALR 93 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence 6899999999 99999999999999999999987 56665555442 343222 2444443332
Q ss_pred hc-------CCCcCEEEEcCCC
Q 018158 244 AG-------KRTLDFILDTVSA 258 (360)
Q Consensus 244 ~~-------~~~~d~vid~~g~ 258 (360)
.. ..++|+++++.|.
T Consensus 94 ~~~~~~~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 94 ELVADGMEQFGRLDVVVANAGV 115 (280)
T ss_dssp HHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCC
Confidence 22 3589999999984
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0022 Score=55.79 Aligned_cols=99 Identities=14% Similarity=0.132 Sum_probs=67.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTS-PSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~-~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ +++|.++++.+...|++|++++++ .++.+.+.+. .|.... .|-.+.+..... ..+
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 96 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGH 96 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999 999999999999999999987654 4444433322 453322 244443332221 347
Q ss_pred cCEEEEcCCCc-------------------------ccHHHHHHHhccCCEEEEeCCCC
Q 018158 249 LDFILDTVSAK-------------------------HSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 249 ~d~vid~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+|+++++.|.. ...+.++..|+++|+++.++...
T Consensus 97 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~ 155 (270)
T 3is3_A 97 LDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT 155 (270)
T ss_dssp CCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence 99999998842 11345666777889999998755
|
| >3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0015 Score=54.11 Aligned_cols=97 Identities=11% Similarity=0.115 Sum_probs=68.1
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHc---CCC--eEeeCccHHHHHhcCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKELL---GAD--EFILSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~~---g~~--~~v~~~~~~~~~~~~~~~d~vid~ 255 (360)
++++++||-+|+|. |..++.+++.. +.+|++++.+++..+.+++++ |.+ .++..+-.+... ....+|+|+..
T Consensus 38 ~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D~i~~~ 115 (204)
T 3e05_A 38 LQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLD-DLPDPDRVFIG 115 (204)
T ss_dssp CCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCT-TSCCCSEEEES
T ss_pred CCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhh-cCCCCCEEEEC
Confidence 44899999999975 88888898885 368999999999888877642 432 222221111111 12569999987
Q ss_pred CCC---cccHHHHHHHhccCCEEEEeCC
Q 018158 256 VSA---KHSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 256 ~g~---~~~~~~~~~~l~~~G~~v~~g~ 280 (360)
... ...+..+.+.|+++|+++....
T Consensus 116 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 116 GSGGMLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp CCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence 652 3457888999999999987643
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0021 Score=55.44 Aligned_cols=75 Identities=17% Similarity=0.095 Sum_probs=52.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIST-SPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~-~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|..+++.+...|++|+++++ +.++.+.+.+. .+.... .|..+.+..... ..+
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (261)
T 1gee_A 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK 85 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999 99999999988889999999999 77665544332 243211 244443332221 247
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|+++|.
T Consensus 86 id~li~~Ag~ 95 (261)
T 1gee_A 86 LDVMINNAGL 95 (261)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999873
|
| >2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0008 Score=56.89 Aligned_cols=95 Identities=20% Similarity=0.119 Sum_probs=68.2
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcC------CeEEEEeCChhHHHHHHHHc---C-----CC--eEeeCccHHHHH---
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFG------HHVTVISTSPSKEKEAKELL---G-----AD--EFILSTNAMQMQ--- 243 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G------~~V~~~~~~~~~~~~~~~~~---g-----~~--~~v~~~~~~~~~--- 243 (360)
+++++||-+|+|. |..++.+++..+ .+|++++.+++..+.+++++ + .. .++..+-.....
T Consensus 79 ~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 79 KPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp CTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 4899999999976 888889998876 58999999999888777642 2 11 222211111110
Q ss_pred hcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEe
Q 018158 244 AGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 244 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
.....+|+|+........+..+.+.|+++|+++..
T Consensus 158 ~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~ 192 (227)
T 2pbf_A 158 KELGLFDAIHVGASASELPEILVDLLAENGKLIIP 192 (227)
T ss_dssp HHHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEE
T ss_pred ccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEE
Confidence 12357999998776666678999999999998766
|
| >3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00065 Score=56.66 Aligned_cols=95 Identities=16% Similarity=0.182 Sum_probs=67.6
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE-eeCccHHHHHhcCCCcCEEEEcCC
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF-ILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~-v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
.+++++||-+|+|. |..+..+++. +.+|++++.+++..+.+++++ |...+ +...+..........+|+|+....
T Consensus 75 ~~~~~~vLdiG~G~-G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~ 152 (210)
T 3lbf_A 75 LTPQSRVLEIGTGS-GYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAA 152 (210)
T ss_dssp CCTTCEEEEECCTT-SHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSB
T ss_pred CCCCCEEEEEcCCC-CHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccc
Confidence 44899999999974 8888888888 889999999999888877753 43221 111111111112467999998766
Q ss_pred CcccHHHHHHHhccCCEEEEe
Q 018158 258 AKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 258 ~~~~~~~~~~~l~~~G~~v~~ 278 (360)
.......+.+.|+++|+++..
T Consensus 153 ~~~~~~~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 153 PPEIPTALMTQLDEGGILVLP 173 (210)
T ss_dssp CSSCCTHHHHTEEEEEEEEEE
T ss_pred hhhhhHHHHHhcccCcEEEEE
Confidence 555557889999999998765
|
| >2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00067 Score=56.80 Aligned_cols=96 Identities=22% Similarity=0.256 Sum_probs=68.8
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHc---CCCe--EeeCccHHHHHhcCCCcCEEEE
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFG--HHVTVISTSPSKEKEAKELL---GADE--FILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G--~~V~~~~~~~~~~~~~~~~~---g~~~--~v~~~~~~~~~~~~~~~d~vid 254 (360)
.+++++||.+|+| .|..+..+++..| .+|++++.+++..+.+++++ |... ++..+..... .....+|+|+.
T Consensus 75 ~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~ 152 (215)
T 2yxe_A 75 LKPGMKVLEIGTG-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGY-EPLAPYDRIYT 152 (215)
T ss_dssp CCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCC-GGGCCEEEEEE
T ss_pred CCCCCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC-CCCCCeeEEEE
Confidence 3489999999998 4888999999886 78999999999888877643 3222 2221111111 11457999998
Q ss_pred cCCCcccHHHHHHHhccCCEEEEeC
Q 018158 255 TVSAKHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 255 ~~g~~~~~~~~~~~l~~~G~~v~~g 279 (360)
..+.......+.+.|+++|+++..-
T Consensus 153 ~~~~~~~~~~~~~~L~pgG~lv~~~ 177 (215)
T 2yxe_A 153 TAAGPKIPEPLIRQLKDGGKLLMPV 177 (215)
T ss_dssp SSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred CCchHHHHHHHHHHcCCCcEEEEEE
Confidence 7765555578899999999987663
|
| >4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0016 Score=55.29 Aligned_cols=96 Identities=11% Similarity=0.125 Sum_probs=68.4
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHcCC----CeEe-eCccHHHHHhcCCCcCEEEE
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKELLGA----DEFI-LSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~~g~----~~~v-~~~~~~~~~~~~~~~d~vid 254 (360)
++||++||=+|+|+ |..+..+++..|. +|++++.+++..+.+++.... ..+. +..+..........+|+||.
T Consensus 75 ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~ 153 (233)
T 4df3_A 75 VKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYA 153 (233)
T ss_dssp CCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEE
Confidence 67999999999964 8889999999886 699999999988888775431 1121 22222222333567999986
Q ss_pred cCCCc----ccHHHHHHHhccCCEEEEe
Q 018158 255 TVSAK----HSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 255 ~~g~~----~~~~~~~~~l~~~G~~v~~ 278 (360)
..... ..+..+.+.|+++|+++..
T Consensus 154 d~~~~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 154 DVAQPEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp CCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eccCChhHHHHHHHHHHhccCCCEEEEE
Confidence 55433 2456778899999999765
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0021 Score=56.91 Aligned_cols=75 Identities=24% Similarity=0.209 Sum_probs=52.4
Q ss_pred CCcEEEEEcC-C--hHHHHHHHHHHHcCCeEEEEeCChhHHHHHH---HHcCCCeE--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-G--GLGHVAVKFGKAFGHHVTVISTSPSKEKEAK---ELLGADEF--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g--~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~---~~~g~~~~--v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ | ++|.++++.+...|++|++++++++..+.+. +..|.... .|-.+.+..... ..+
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS 108 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5889999999 6 9999999988899999999999875443333 22443222 244444333222 357
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|+++|.
T Consensus 109 iD~lVnnAG~ 118 (296)
T 3k31_A 109 LDFVVHAVAF 118 (296)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999999984
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0026 Score=54.54 Aligned_cols=75 Identities=15% Similarity=0.095 Sum_probs=54.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC--C-eE--eeCccHHHHHhc-------CCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA--D-EF--ILSTNAMQMQAG-------KRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~--~-~~--v~~~~~~~~~~~-------~~~~d 250 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.+.. . .. .|..+.+..... ..++|
T Consensus 5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (251)
T 1zk4_A 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS 84 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 5789999999 9999999999988999999999998877666554431 1 11 244443333222 24699
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|+++|.
T Consensus 85 ~li~~Ag~ 92 (251)
T 1zk4_A 85 TLVNNAGI 92 (251)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999874
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0009 Score=58.16 Aligned_cols=75 Identities=17% Similarity=0.213 Sum_probs=52.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHH-cCCeEEEEeCChhHHHHHHHHc---CCC-eE--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKA-FGHHVTVISTSPSKEKEAKELL---GAD-EF--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~-~G~~V~~~~~~~~~~~~~~~~~---g~~-~~--v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|..+++.+.. .|++|++++++.++.+.+.+.+ +.. .. .|-.+.+..... ..+
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 82 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 5789999999 9999998888877 8999999999987765544333 422 12 243443333222 247
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|+++|.
T Consensus 83 id~li~~Ag~ 92 (276)
T 1wma_A 83 LDVLVNNAGI 92 (276)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCcc
Confidence 9999999874
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00036 Score=59.58 Aligned_cols=97 Identities=12% Similarity=0.125 Sum_probs=67.4
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcCCCe-EeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADE-FILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
.+++||+|+ |.+|..+++.+...| ++|++++|++++...+.. -+... ..|..+.+.+...-.++|++|++.|....
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~~ 101 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP-TNSQIIMGDVLNHAALKQAMQGQDIVYANLTGEDL 101 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCC-TTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTTH
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccccc-CCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCch
Confidence 468999999 999999999999999 799999999876443211 12211 13455555555556689999999886432
Q ss_pred ---HHHHHHHhccC--CEEEEeCCCC
Q 018158 262 ---LGPILELLKVN--GTLSVVGAPE 282 (360)
Q Consensus 262 ---~~~~~~~l~~~--G~~v~~g~~~ 282 (360)
.+.+++.++.. ++++.++...
T Consensus 102 ~~~~~~~~~~~~~~~~~~iV~iSS~~ 127 (236)
T 3qvo_A 102 DIQANSVIAAMKACDVKRLIFVLSLG 127 (236)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred hHHHHHHHHHHHHcCCCEEEEEecce
Confidence 24456666543 5899887643
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00082 Score=58.54 Aligned_cols=74 Identities=16% Similarity=0.179 Sum_probs=51.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-eEeeCccHHHHHhc-------CCCcCEEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-EFILSTNAMQMQAG-------KRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~-------~~~~d~vid 254 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++++.+.. -... ...|-.+.+..... ..++|++|+
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 93 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNL-PNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVN 93 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCC-TTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhc-CCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 5789999999 999999999999999999999999876654322 1111 11244443332221 357999999
Q ss_pred cCCC
Q 018158 255 TVSA 258 (360)
Q Consensus 255 ~~g~ 258 (360)
++|.
T Consensus 94 nAg~ 97 (266)
T 3p19_A 94 NAGM 97 (266)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 9984
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0018 Score=56.60 Aligned_cols=75 Identities=16% Similarity=0.136 Sum_probs=52.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc------CCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG------KRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~------~~~~d 250 (360)
.|+++||+|+ +++|.++++.+...|++|++++++.++.+.+.+.+ |.... .|-.+.+..... ..++|
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD 111 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVD 111 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence 5889999999 99999999999999999999999887665554433 43222 133332221111 25799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
+++++.|.
T Consensus 112 ~lvnnAg~ 119 (275)
T 4imr_A 112 ILVINASA 119 (275)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999984
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00097 Score=58.56 Aligned_cols=75 Identities=19% Similarity=0.162 Sum_probs=57.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHh-------cCCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQA-------GKRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~-------~~~~~d~v 252 (360)
.++++||+|+ +++|.++++.+...|++|++++++.++.+.+.+.++.... .|-.+.+.... ...++|++
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 83 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL 83 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 5789999999 9999999999999999999999999988887775664322 24334332221 13579999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
+++.|.
T Consensus 84 vnnAg~ 89 (281)
T 3zv4_A 84 IPNAGI 89 (281)
T ss_dssp ECCCCC
T ss_pred EECCCc
Confidence 999984
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0023 Score=54.54 Aligned_cols=74 Identities=16% Similarity=0.134 Sum_probs=54.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE--eeCccHHHHHhc---CCCcCEEEEcCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF--ILSTNAMQMQAG---KRTLDFILDTVS 257 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~--v~~~~~~~~~~~---~~~~d~vid~~g 257 (360)
.++++||+|+ |.+|..+++.+...|++|++++++.++.+.+.+......+ .|..+.+..... ..++|++|++.|
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag 85 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA 85 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCc
Confidence 5789999999 9999999999999999999999998877766553422222 244444333332 246899999998
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0017 Score=56.21 Aligned_cols=75 Identities=16% Similarity=0.181 Sum_probs=53.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVI-STSPSKEKEAKELL---GADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~-~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|.++++.+...|++|+++ .++.++.+.+.+.+ |.... .|-.+.+..... ..+
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR 82 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 6789999999 999999999999999999886 88887766655433 43222 244443332221 357
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|++.|.
T Consensus 83 id~lv~nAg~ 92 (258)
T 3oid_A 83 LDVFVNNAAS 92 (258)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999973
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0023 Score=55.80 Aligned_cols=73 Identities=15% Similarity=0.139 Sum_probs=53.3
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC--C-eE--eeCccHHHHHhc-------CCCcCEE
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA--D-EF--ILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~--~-~~--v~~~~~~~~~~~-------~~~~d~v 252 (360)
+++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+.. . .. .|-.+.+..... ..++|++
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 101 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL 101 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 78999999 9999999999999999999999999887776654432 1 11 244444333222 2468999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|++.|.
T Consensus 102 vnnAG~ 107 (272)
T 2nwq_A 102 INNAGL 107 (272)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999874
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0011 Score=57.59 Aligned_cols=75 Identities=23% Similarity=0.141 Sum_probs=52.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIST-SPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~-~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|..+++.+...|++|+++++ +.++.+.+.+. .|.... .|-.+.+..... -.+
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 99 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG 99 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999 99999999999999999999998 76665544332 354322 244444333222 247
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|++.|.
T Consensus 100 ~d~vi~~Ag~ 109 (274)
T 1ja9_A 100 LDFVMSNSGM 109 (274)
T ss_dssp EEEEECCCCC
T ss_pred CCEEEECCCC
Confidence 9999999874
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0021 Score=56.74 Aligned_cols=99 Identities=14% Similarity=0.114 Sum_probs=65.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhH-HHHHHH---HcCCCeE---eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSK-EKEAKE---LLGADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~-~~~~~~---~~g~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
.|+++||+|+ |++|.++++.+...|++|++++++.++ .+.+.+ ..|.... .|-.+.+..... ..+
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 125 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS 125 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5889999999 999999999999999999999987653 222222 1343322 244443332221 357
Q ss_pred cCEEEEcCCCcc--------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 249 LDFILDTVSAKH--------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 249 ~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+|++|+++|... ..+.++..|+++|+++.++...
T Consensus 126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~ 185 (291)
T 3ijr_A 126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIV 185 (291)
T ss_dssp CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTH
T ss_pred CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechH
Confidence 999999987320 1234445566789999997643
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00097 Score=62.88 Aligned_cols=96 Identities=10% Similarity=0.096 Sum_probs=66.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHcCCCe-EeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKELLGADE-FILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
.+++|+|+|+|.+|.+++..+... |.+|++++|+.++.+.+.+..+... .++..+.+.....-.++|+||+|++....
T Consensus 22 ~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~~~ 101 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYTFH 101 (467)
T ss_dssp -CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGGGH
T ss_pred CCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchhhh
Confidence 467899999999999988888877 6799999999988777665334322 23444443333334589999999986532
Q ss_pred HHHHHHHhccCCEEEEeC
Q 018158 262 LGPILELLKVNGTLSVVG 279 (360)
Q Consensus 262 ~~~~~~~l~~~G~~v~~g 279 (360)
......+++.+..+++..
T Consensus 102 ~~v~~a~l~~g~~vvd~~ 119 (467)
T 2axq_A 102 PNVVKSAIRTKTDVVTSS 119 (467)
T ss_dssp HHHHHHHHHHTCEEEECS
T ss_pred HHHHHHHHhcCCEEEEee
Confidence 233445667777777654
|
| >1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00065 Score=57.43 Aligned_cols=94 Identities=17% Similarity=0.184 Sum_probs=67.0
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHc---C-----CC--eEeeCccHHHHHhcCCCcC
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFG--HHVTVISTSPSKEKEAKELL---G-----AD--EFILSTNAMQMQAGKRTLD 250 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G--~~V~~~~~~~~~~~~~~~~~---g-----~~--~~v~~~~~~~~~~~~~~~d 250 (360)
+++++||-+|+|. |..+..+++..| .+|++++.+++..+.+++++ | .+ .++.. +..........+|
T Consensus 76 ~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~fD 153 (226)
T 1i1n_A 76 HEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG-DGRMGYAEEAPYD 153 (226)
T ss_dssp CTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEES-CGGGCCGGGCCEE
T ss_pred CCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEEC-CcccCcccCCCcC
Confidence 3899999999975 888888888876 58999999999888776542 2 11 12211 1111111245799
Q ss_pred EEEEcCCCcccHHHHHHHhccCCEEEEe
Q 018158 251 FILDTVSAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 251 ~vid~~g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
+|+........+..+.+.|+++|+++..
T Consensus 154 ~i~~~~~~~~~~~~~~~~LkpgG~lv~~ 181 (226)
T 1i1n_A 154 AIHVGAAAPVVPQALIDQLKPGGRLILP 181 (226)
T ss_dssp EEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred EEEECCchHHHHHHHHHhcCCCcEEEEE
Confidence 9997776666678999999999999875
|
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00066 Score=59.39 Aligned_cols=97 Identities=12% Similarity=0.060 Sum_probs=73.1
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcCC-hHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLG-GLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag-~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+.......+++.+.-- .|++++|+|+| .+|.-+++++...|++|+++.+....+
T Consensus 143 ~~~PcTp~gi~~ll~~~~i~l--~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L------------------ 202 (301)
T 1a4i_A 143 CFIPCTPKGCLELIKETGVPI--AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHL------------------ 202 (301)
T ss_dssp CCCCHHHHHHHHHHHTTTCCC--TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSH------------------
T ss_pred CccCchHHHHHHHHHHcCCCC--CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccH------------------
Confidence 467777777777777766433 79999999996 689999999999999999987543222
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.+.-+.+|+||.++|....+.. +++++|..++++|...
T Consensus 203 ---~~~~~~ADIVI~Avg~p~~I~~--~~vk~GavVIDVgi~~ 240 (301)
T 1a4i_A 203 ---DEEVNKGDILVVATGQPEMVKG--EWIKPGAIVIDCGINY 240 (301)
T ss_dssp ---HHHHTTCSEEEECCCCTTCBCG--GGSCTTCEEEECCCBC
T ss_pred ---HHHhccCCEEEECCCCcccCCH--HHcCCCcEEEEccCCC
Confidence 1223578999999998743322 4578999999999754
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00052 Score=59.27 Aligned_cols=95 Identities=14% Similarity=0.033 Sum_probs=72.0
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+.......+++.+ - .|++++|+|. +.+|..+++++...|++|+++.+....++.
T Consensus 130 ~~~PcTp~gv~~lL~~~~--l--~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~~---------------- 189 (276)
T 3ngx_A 130 FLVPATPRAVIDIMDYYG--Y--HENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGS---------------- 189 (276)
T ss_dssp SSCCHHHHHHHHHHHHHT--C--CSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHH----------------
T ss_pred CCCCCcHHHHHHHHHHhC--c--CCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHHH----------------
Confidence 356777777788887776 3 7999999999 569999999999999999999864332222
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.-+.+|++|.++|....+.. +++++|..++++|...
T Consensus 190 -----~~~~ADIVI~Avg~p~~I~~--~~vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 190 -----MTRSSKIVVVAVGRPGFLNR--EMVTPGSVVIDVGINY 225 (276)
T ss_dssp -----HHHHSSEEEECSSCTTCBCG--GGCCTTCEEEECCCEE
T ss_pred -----hhccCCEEEECCCCCccccH--hhccCCcEEEEeccCc
Confidence 12357999999987644332 5679999999998754
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.001 Score=57.54 Aligned_cols=75 Identities=16% Similarity=0.128 Sum_probs=55.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~d~v 252 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.++.... .|-.+.+..... ..++|++
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 90 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA 90 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 5789999999 9999999999999999999999998877766654664322 244444333222 2479999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
|+++|.
T Consensus 91 i~~Ag~ 96 (265)
T 2o23_A 91 VNCAGI 96 (265)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 999874
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0028 Score=55.59 Aligned_cols=75 Identities=12% Similarity=0.168 Sum_probs=52.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHc----CCCeE---eeCccHHHHHhc-------CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIST-SPSKEKEAKELL----GADEF---ILSTNAMQMQAG-------KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~-~~~~~~~~~~~~----g~~~~---v~~~~~~~~~~~-------~~ 247 (360)
.++++||+|+ |++|.++++.+...|++|+++++ +.++.+.+.+.+ +.... .|-.+.+..... ..
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 103 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG 103 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence 5789999999 99999999999999999999998 555555444322 32222 233343332221 35
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|++++++|.
T Consensus 104 ~iD~lv~nAg~ 114 (281)
T 3v2h_A 104 GADILVNNAGV 114 (281)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999984
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0015 Score=56.65 Aligned_cols=75 Identities=17% Similarity=0.205 Sum_probs=54.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc----CCCeE---eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL----GADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +.... .|-.+.+..... ..+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG 85 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999 99999999999999999999999988766554433 53322 244444333222 247
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|+++|.
T Consensus 86 id~lv~~Ag~ 95 (263)
T 3ai3_A 86 ADILVNNAGT 95 (263)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0016 Score=57.57 Aligned_cols=75 Identities=21% Similarity=0.244 Sum_probs=53.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CC---CeE---eeCccHHHHHhc-------C
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GA---DEF---ILSTNAMQMQAG-------K 246 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~---~~~---v~~~~~~~~~~~-------~ 246 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ |. ... .|-.+.+..... .
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 104 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 104 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 5789999999 99999999999889999999999988776554432 32 211 244444333221 2
Q ss_pred CCcCEEEEcCCC
Q 018158 247 RTLDFILDTVSA 258 (360)
Q Consensus 247 ~~~d~vid~~g~ 258 (360)
.++|++|+++|.
T Consensus 105 g~iD~lvnnAG~ 116 (297)
T 1xhl_A 105 GKIDILVNNAGA 116 (297)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 479999999873
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00073 Score=60.07 Aligned_cols=76 Identities=9% Similarity=0.082 Sum_probs=53.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCC---hhHHHHHHHHcC----CC-eEeeCccHHHHHhcCCCcCEEEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTS---PSKEKEAKELLG----AD-EFILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~---~~~~~~~~~~~g----~~-~~v~~~~~~~~~~~~~~~d~vid 254 (360)
.+++++|+|+|++|.+++..+...|+ +|+++.|+ .++.+.+.+.++ .. ..++..+.+.....-..+|+||+
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiIIN 226 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILTN 226 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEEEE
Confidence 58899999999999999999999999 79999999 666665554343 21 22333332111222346899999
Q ss_pred cCCCc
Q 018158 255 TVSAK 259 (360)
Q Consensus 255 ~~g~~ 259 (360)
|++..
T Consensus 227 aTp~G 231 (312)
T 3t4e_A 227 GTKVG 231 (312)
T ss_dssp CSSTT
T ss_pred CCcCC
Confidence 99753
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0011 Score=58.00 Aligned_cols=91 Identities=18% Similarity=0.082 Sum_probs=62.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCC---CeEeeCccHHHHHhcCCCcCEEEEcCCCc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGA---DEFILSTNAMQMQAGKRTLDFILDTVSAK 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~---~~~v~~~~~~~~~~~~~~~d~vid~~g~~ 259 (360)
.+++++|+|+|++|.+++..+...|+ +|+++.|+.++.+.+.+.++. ....... +...++|+||+|++..
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~------~l~~~aDiIInaTp~g 198 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFE------QLKQSYDVIINSTSAS 198 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG------GCCSCEEEEEECSCCC
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHH------HhcCCCCEEEEcCcCC
Confidence 68899999999999999998889997 899999999988777665653 1222221 1236899999999764
Q ss_pred ccHHH---HHHHhccCCEEEEeCC
Q 018158 260 HSLGP---ILELLKVNGTLSVVGA 280 (360)
Q Consensus 260 ~~~~~---~~~~l~~~G~~v~~g~ 280 (360)
..-.. -...++++..++++-.
T Consensus 199 m~~~~~~l~~~~l~~~~~V~DlvY 222 (281)
T 3o8q_A 199 LDGELPAIDPVIFSSRSVCYDMMY 222 (281)
T ss_dssp C----CSCCGGGEEEEEEEEESCC
T ss_pred CCCCCCCCCHHHhCcCCEEEEecC
Confidence 21000 1234556555566644
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0029 Score=55.73 Aligned_cols=75 Identities=19% Similarity=0.228 Sum_probs=53.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCC---eEEEEeCChhHHHHHHHHc-----CCCeE---eeCccHHHHHhc------
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGH---HVTVISTSPSKEKEAKELL-----GADEF---ILSTNAMQMQAG------ 245 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~---~V~~~~~~~~~~~~~~~~~-----g~~~~---v~~~~~~~~~~~------ 245 (360)
.++++||+|+ |++|.++++.+...|+ +|++++++.++.+.+.+.+ +.... .|-.+.+.....
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 5789999999 9999998887777776 9999999998877765533 32211 233333332221
Q ss_pred -CCCcCEEEEcCCC
Q 018158 246 -KRTLDFILDTVSA 258 (360)
Q Consensus 246 -~~~~d~vid~~g~ 258 (360)
..++|++|+++|.
T Consensus 112 ~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 112 EFKDIDILVNNAGK 125 (287)
T ss_dssp GGCSCCEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 2479999999983
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0035 Score=56.73 Aligned_cols=98 Identities=16% Similarity=0.247 Sum_probs=66.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhH-----------HHHHHHHcCCCeE---eeCccHHHHHhc---
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSK-----------EKEAKELLGADEF---ILSTNAMQMQAG--- 245 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~-----------~~~~~~~~g~~~~---v~~~~~~~~~~~--- 245 (360)
.|+++||+|+ +++|.++++.+...|++|++++++.++ .+.+.+ .|.... .|-.+.+.....
T Consensus 44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~-~g~~~~~~~~Dv~d~~~v~~~~~~ 122 (346)
T 3kvo_A 44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEA-VGGKALPCIVDVRDEQQISAAVEK 122 (346)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHH
Confidence 6899999999 999999999988899999999998763 222333 453222 244444333222
Q ss_pred ----CCCcCEEEEcCCCcc-------------------------cHHHHHHHhcc--CCEEEEeCCCC
Q 018158 246 ----KRTLDFILDTVSAKH-------------------------SLGPILELLKV--NGTLSVVGAPE 282 (360)
Q Consensus 246 ----~~~~d~vid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~ 282 (360)
..++|++|+++|... ..+.++..|+. .|+|+.++...
T Consensus 123 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~ 190 (346)
T 3kvo_A 123 AIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPL 190 (346)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCC
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 348999999998420 12444555553 48999998754
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0028 Score=55.97 Aligned_cols=99 Identities=12% Similarity=0.118 Sum_probs=65.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCh--hHHHHHHH---HcCCCeEe---eCccHHHHHhc-------CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSP--SKEKEAKE---LLGADEFI---LSTNAMQMQAG-------KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~--~~~~~~~~---~~g~~~~v---~~~~~~~~~~~-------~~ 247 (360)
.++++||+|+ |++|.++++.+...|++|++++++. ++.+.+.+ ..|....+ |-.+.+..... ..
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 127 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG 127 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5789999999 9999999999999999999998763 23333222 24543222 33333322221 35
Q ss_pred CcCEEEEcCCCcc--------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 248 TLDFILDTVSAKH--------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 248 ~~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
++|+++++.|... ..+.++..++++|+++.++...
T Consensus 128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~ 188 (294)
T 3r3s_A 128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQ 188 (294)
T ss_dssp CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGG
T ss_pred CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChh
Confidence 8999999998421 1233444566789999997654
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00097 Score=58.81 Aligned_cols=75 Identities=16% Similarity=0.184 Sum_probs=57.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHhc---CCCcCEEEEcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQAG---KRTLDFILDTV 256 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~---~~~~d~vid~~ 256 (360)
.|+++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.++.... .|-.+.+..... -.++|++|+++
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~nA 94 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINNA 94 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEECC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEECC
Confidence 6899999999 9999999999999999999999999988877765653222 244444333332 24789999999
Q ss_pred CC
Q 018158 257 SA 258 (360)
Q Consensus 257 g~ 258 (360)
|.
T Consensus 95 g~ 96 (291)
T 3rd5_A 95 GI 96 (291)
T ss_dssp CC
T ss_pred cC
Confidence 84
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0037 Score=54.87 Aligned_cols=75 Identities=15% Similarity=0.184 Sum_probs=53.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +.... .|-.+.+..... ..++
T Consensus 43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i 122 (285)
T 2c07_A 43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV 122 (285)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999999 99999999999889999999998887766554433 43321 244444333222 3579
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|+++|.
T Consensus 123 d~li~~Ag~ 131 (285)
T 2c07_A 123 DILVNNAGI 131 (285)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999874
|
| >1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A* | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0008 Score=57.33 Aligned_cols=97 Identities=24% Similarity=0.235 Sum_probs=68.5
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE-eeCccHHHHHhcCCCcCEEEEcCC
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF-ILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
++++++||.+|+| .|..++.+++..+.+|++++.+++..+.++++ .|...+ +...+.........++|+|+.+..
T Consensus 89 ~~~~~~vLdiG~G-~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Ii~~~~ 167 (235)
T 1jg1_A 89 LKPGMNILEVGTG-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYDVIIVTAG 167 (235)
T ss_dssp CCTTCCEEEECCT-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSB
T ss_pred CCCCCEEEEEeCC-cCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCCCCccEEEECCc
Confidence 4489999999998 68889999998778899999999888777764 343222 111111110011345999998776
Q ss_pred CcccHHHHHHHhccCCEEEEeC
Q 018158 258 AKHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 258 ~~~~~~~~~~~l~~~G~~v~~g 279 (360)
.......+.+.|+++|+++..-
T Consensus 168 ~~~~~~~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 168 APKIPEPLIEQLKIGGKLIIPV 189 (235)
T ss_dssp BSSCCHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEEE
Confidence 5555678899999999987653
|
| >1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00069 Score=57.37 Aligned_cols=94 Identities=17% Similarity=0.136 Sum_probs=67.2
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcC-------CeEEEEeCChhHHHHHHHHc---C-------CCeEeeCccHHHHHhc
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFG-------HHVTVISTSPSKEKEAKELL---G-------ADEFILSTNAMQMQAG 245 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G-------~~V~~~~~~~~~~~~~~~~~---g-------~~~~v~~~~~~~~~~~ 245 (360)
+++++||-+|+|. |..+..+++..+ .+|++++.+++..+.+++++ + .-.++..+...... .
T Consensus 83 ~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~ 160 (227)
T 1r18_A 83 KPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYP-P 160 (227)
T ss_dssp CTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCG-G
T ss_pred CCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCC-c
Confidence 4899999999976 888888888776 48999999998887776642 1 11222221111111 1
Q ss_pred CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEe
Q 018158 246 KRTLDFILDTVSAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 246 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
...+|+|+...........+.+.|+++|+++..
T Consensus 161 ~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~ 193 (227)
T 1r18_A 161 NAPYNAIHVGAAAPDTPTELINQLASGGRLIVP 193 (227)
T ss_dssp GCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred CCCccEEEECCchHHHHHHHHHHhcCCCEEEEE
Confidence 357999998877666678999999999998765
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.002 Score=56.11 Aligned_cols=99 Identities=13% Similarity=0.173 Sum_probs=65.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIS-TSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~-~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|.++++.+...|++|++++ ++.++.+.+.+. .|.... .|-.+.+..... ..+
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 105 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG 105 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 6899999999 9999999988888899998874 455444444332 343322 244444333222 358
Q ss_pred cCEEEEcCCCc-------------------------ccHHHHHHHhccCCEEEEeCCCC
Q 018158 249 LDFILDTVSAK-------------------------HSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 249 ~d~vid~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+|++|+++|.. ...+.++..++.+|+++.++...
T Consensus 106 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~ 164 (267)
T 3u5t_A 106 VDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQ 164 (267)
T ss_dssp EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChh
Confidence 99999999842 01345556667789999997643
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0034 Score=54.38 Aligned_cols=75 Identities=17% Similarity=0.229 Sum_probs=54.2
Q ss_pred CCcEEEEEcC-C-hHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---C-CCe---EeeCccHHHHHhc-------CC
Q 018158 184 AKKRIGIVGL-G-GLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---G-ADE---FILSTNAMQMQAG-------KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g-~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g-~~~---~v~~~~~~~~~~~-------~~ 247 (360)
.++++||+|+ | ++|..+++.+...|++|++++++.++.+.+.+.+ + ... ..|-.+.+..... ..
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 100 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAG 100 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhC
Confidence 6889999999 7 7999999988889999999999998876665544 2 111 1244444333221 35
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|++|++.|.
T Consensus 101 ~id~li~~Ag~ 111 (266)
T 3o38_A 101 RLDVLVNNAGL 111 (266)
T ss_dssp CCCEEEECCCC
T ss_pred CCcEEEECCCc
Confidence 79999999984
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0036 Score=54.90 Aligned_cols=75 Identities=16% Similarity=0.157 Sum_probs=52.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC----------------hhHHHHHHHH---cCCCeE---eeCccHH
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTS----------------PSKEKEAKEL---LGADEF---ILSTNAM 240 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~----------------~~~~~~~~~~---~g~~~~---v~~~~~~ 240 (360)
.++++||+|+ +++|.++++.+...|++|++++++ .++++.+.+. .+.... .|-.+.+
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 89 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD 89 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence 5899999999 999999999999999999999876 5555554432 233222 2444443
Q ss_pred HHHhc-------CCCcCEEEEcCCC
Q 018158 241 QMQAG-------KRTLDFILDTVSA 258 (360)
Q Consensus 241 ~~~~~-------~~~~d~vid~~g~ 258 (360)
..... ..++|++|++.|.
T Consensus 90 ~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 90 ALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCcc
Confidence 33222 3479999999984
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0031 Score=53.54 Aligned_cols=74 Identities=15% Similarity=0.149 Sum_probs=54.6
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH----cCCCeE---eeCccHHHHHhc-------CCCc
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL----LGADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~----~g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+. .+.... .|-.+.+..... ..++
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 81 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV 81 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 678999999 9999999999999999999999998877665432 343322 244444443332 2479
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|+++|.
T Consensus 82 d~li~~Ag~ 90 (235)
T 3l77_A 82 DVVVANAGL 90 (235)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCcc
Confidence 999999984
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.18 E-value=0.003 Score=55.32 Aligned_cols=98 Identities=13% Similarity=0.149 Sum_probs=65.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC------------hhHHHHHHHH---cCCCeE---eeCccHHHHHh
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTS------------PSKEKEAKEL---LGADEF---ILSTNAMQMQA 244 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~------------~~~~~~~~~~---~g~~~~---v~~~~~~~~~~ 244 (360)
.++++||+|+ |++|.++++.+...|++|++++++ .++.+.+... .+.... .|-.+.+....
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 88 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR 88 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 5889999999 999999999999999999999987 5544443322 343222 24444433322
Q ss_pred c-------CCCcCEEEEcCCCcc-----------------------cHHHHHHHhccCCEEEEeCCC
Q 018158 245 G-------KRTLDFILDTVSAKH-----------------------SLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 245 ~-------~~~~d~vid~~g~~~-----------------------~~~~~~~~l~~~G~~v~~g~~ 281 (360)
. ..++|++|+++|... ..+.++..|+.+|+++.++..
T Consensus 89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~ 155 (287)
T 3pxx_A 89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSV 155 (287)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCH
T ss_pred HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccc
Confidence 1 348999999998421 123344445668899998764
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0013 Score=55.32 Aligned_cols=93 Identities=11% Similarity=0.049 Sum_probs=65.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-eEeeCcc-HHHHHhcCCCcCEEEEcCCCcc---
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-EFILSTN-AMQMQAGKRTLDFILDTVSAKH--- 260 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~-~~~~~~~~~~~d~vid~~g~~~--- 260 (360)
+|||+|+ |.+|..+++.+...|.+|++++|++++...+ -+.. ...|..+ .+.+...-.++|+||+++|...
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~~~ 78 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGKSL 78 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTSSC
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCCCc
Confidence 5899999 9999999999999999999999998754322 1111 1235555 5556666678999999998532
Q ss_pred ------cHHHHHHHhccC--CEEEEeCCCC
Q 018158 261 ------SLGPILELLKVN--GTLSVVGAPE 282 (360)
Q Consensus 261 ------~~~~~~~~l~~~--G~~v~~g~~~ 282 (360)
....+++.++.. ++++.++...
T Consensus 79 ~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~ 108 (219)
T 3dqp_A 79 LKVDLYGAVKLMQAAEKAEVKRFILLSTIF 108 (219)
T ss_dssp CCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred EeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence 123455555543 4898887654
|
| >2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0018 Score=55.74 Aligned_cols=97 Identities=13% Similarity=0.083 Sum_probs=69.7
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHc----CCCeE-eeCccHHHHHhcCCCcCEEEE
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAF--GHHVTVISTSPSKEKEAKELL----GADEF-ILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~--G~~V~~~~~~~~~~~~~~~~~----g~~~~-v~~~~~~~~~~~~~~~d~vid 254 (360)
++++++||.+|+|. |..+..+++.. +.+|++++.+++..+.+++.+ |.+.+ +...+..........+|+|+.
T Consensus 94 ~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~ 172 (258)
T 2pwy_A 94 LAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVAL 172 (258)
T ss_dssp CCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEE
T ss_pred CCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEE
Confidence 44999999999985 88888999986 569999999999888887753 53222 111111111011356999997
Q ss_pred cCCCc-ccHHHHHHHhccCCEEEEeC
Q 018158 255 TVSAK-HSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 255 ~~g~~-~~~~~~~~~l~~~G~~v~~g 279 (360)
..... ..+..+.+.|+++|+++.+.
T Consensus 173 ~~~~~~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 173 DLMEPWKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp ESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence 66654 56889999999999998764
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00064 Score=59.71 Aligned_cols=72 Identities=13% Similarity=0.178 Sum_probs=52.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCC----Ce--EeeCccHHHHHhcCCCcCEEEEcC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGA----DE--FILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~----~~--~v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
.+++++|+|+|++|.+++..+...|+ +|+++.|+.++.+.+.+.++. .. ..+..+. .+.-.++|+||+|+
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l---~~~l~~~DiVInaT 202 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGI---EDVIAAADGVVNAT 202 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTH---HHHHHHSSEEEECS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHH---HHHHhcCCEEEECC
Confidence 68899999999999999999999999 699999999988766554531 11 1221122 22234689999999
Q ss_pred CC
Q 018158 257 SA 258 (360)
Q Consensus 257 g~ 258 (360)
+.
T Consensus 203 p~ 204 (283)
T 3jyo_A 203 PM 204 (283)
T ss_dssp ST
T ss_pred CC
Confidence 64
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0016 Score=61.18 Aligned_cols=95 Identities=12% Similarity=0.109 Sum_probs=64.3
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE--eeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF--ILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~--v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
+++++|+|+|.+|..+++.+...|++|++++++.++.+.+.+.++.... .+..+.+.....-.++|+|+++++.....
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~~~ 82 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFHA 82 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--CHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccccch
Confidence 5789999999999999888888899999999998877665543442111 24444434434445899999999864332
Q ss_pred HHHHHHhccCCEEEEeC
Q 018158 263 GPILELLKVNGTLSVVG 279 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g 279 (360)
.....+++.+..+++..
T Consensus 83 ~i~~a~l~~g~~vvd~~ 99 (450)
T 1ff9_A 83 TVIKSAIRQKKHVVTTS 99 (450)
T ss_dssp HHHHHHHHHTCEEEESS
T ss_pred HHHHHHHhCCCeEEEee
Confidence 33445667766776653
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00096 Score=56.89 Aligned_cols=98 Identities=16% Similarity=0.110 Sum_probs=64.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHcCCCe-EeeCccHHHHHhcCCCcCEEEEcCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKELLGADE-FILSTNAMQMQAGKRTLDFILDTVSAK 259 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~d~vid~~g~~ 259 (360)
.++++||+|+ |.+|..+++.+...|+ +|+++++++++...... -+... ..|..+.+.+...-.++|++|+++|..
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~ 95 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY-KNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 95 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG-GGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccccc-CCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence 4678999999 9999999999988999 99999998764332211 12211 124444444444456899999999853
Q ss_pred c--------------cHHHHHHHhccC--CEEEEeCCCC
Q 018158 260 H--------------SLGPILELLKVN--GTLSVVGAPE 282 (360)
Q Consensus 260 ~--------------~~~~~~~~l~~~--G~~v~~g~~~ 282 (360)
. ....+++.+++. ++++.++...
T Consensus 96 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~ 134 (242)
T 2bka_A 96 RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKG 134 (242)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred cccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCc
Confidence 2 112334444432 6899887654
|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0013 Score=58.46 Aligned_cols=88 Identities=23% Similarity=0.351 Sum_probs=68.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc---
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH--- 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~--- 260 (360)
.|+++.|+|.|.+|...++.++..|++|++.+++.++ +.+.+ +|... . +. .+.-.+.|+|+.++....
T Consensus 141 ~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~-~g~~~-~---~l---~ell~~aDvV~l~~p~~~~t~ 211 (307)
T 1wwk_A 141 EGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERAKE-VNGKF-V---DL---ETLLKESDVVTIHVPLVESTY 211 (307)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHH-TTCEE-C---CH---HHHHHHCSEEEECCCCSTTTT
T ss_pred CCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhh-cCccc-c---CH---HHHHhhCCEEEEecCCChHHh
Confidence 6889999999999999999999999999999998876 55555 77642 1 22 122346899999887432
Q ss_pred -cH-HHHHHHhccCCEEEEeCC
Q 018158 261 -SL-GPILELLKVNGTLSVVGA 280 (360)
Q Consensus 261 -~~-~~~~~~l~~~G~~v~~g~ 280 (360)
.+ ...+..|++++.+++++.
T Consensus 212 ~li~~~~l~~mk~ga~lin~ar 233 (307)
T 1wwk_A 212 HLINEERLKLMKKTAILINTSR 233 (307)
T ss_dssp TCBCHHHHHHSCTTCEEEECSC
T ss_pred hhcCHHHHhcCCCCeEEEECCC
Confidence 22 467789999999999975
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00096 Score=58.61 Aligned_cols=95 Identities=16% Similarity=0.075 Sum_probs=67.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhcCCCcCEEEEcCCCcc---
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAGKRTLDFILDTVSAKH--- 260 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g~~~--- 260 (360)
+|||+|+ |.+|..+++.+... |.+|++++|++++...+.. .+...+ .|..+.+.+...-.++|+||.+.+...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~-~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~ 80 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWR-GKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPSF 80 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGB-TTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCSHH
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhh-CCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCccch
Confidence 5899999 99999998888877 8999999999876544332 333222 355666666666779999999988531
Q ss_pred ----cHHHHHHHhccC--CEEEEeCCCC
Q 018158 261 ----SLGPILELLKVN--GTLSVVGAPE 282 (360)
Q Consensus 261 ----~~~~~~~~l~~~--G~~v~~g~~~ 282 (360)
....+++.++.. ++++.++...
T Consensus 81 ~~~~~~~~l~~aa~~~gv~~iv~~Ss~~ 108 (289)
T 3e48_A 81 KRIPEVENLVYAAKQSGVAHIIFIGYYA 108 (289)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred hhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence 234556666654 4888876644
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0024 Score=55.75 Aligned_cols=75 Identities=15% Similarity=0.112 Sum_probs=54.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc-------C-CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG-------K-RT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~-~~ 248 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ |.... .|-.+.+..... - .+
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~ 99 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK 99 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 99999999999999999999999988766554322 43221 244443333221 2 68
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|++.|.
T Consensus 100 id~lv~nAg~ 109 (273)
T 1ae1_A 100 LNILVNNAGV 109 (273)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECCCC
Confidence 9999999984
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0012 Score=54.57 Aligned_cols=95 Identities=17% Similarity=0.160 Sum_probs=63.5
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe-EeeCccHHHHHhcCCCcCEEEEcCCCcc---
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE-FILSTNAMQMQAGKRTLDFILDTVSAKH--- 260 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~d~vid~~g~~~--- 260 (360)
.+++|+|+ |.+|..+++.+...|.+|+++++++++...... -+... ..|..+.+.+...-+++|++|+++|...
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 82 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP-RPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLS 82 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSC-CCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCCS
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccC-CceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCCC
Confidence 68999999 999999999999899999999998875432111 12211 1244455555555567999999998532
Q ss_pred -------cHHHHHHHhcc--CCEEEEeCCC
Q 018158 261 -------SLGPILELLKV--NGTLSVVGAP 281 (360)
Q Consensus 261 -------~~~~~~~~l~~--~G~~v~~g~~ 281 (360)
....+++.++. -++++.++..
T Consensus 83 ~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~ 112 (206)
T 1hdo_A 83 PTTVMSEGARNIVAAMKAHGVDKVVACTSA 112 (206)
T ss_dssp CCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred ccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence 12344444443 2588887654
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0022 Score=55.66 Aligned_cols=98 Identities=17% Similarity=0.145 Sum_probs=63.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChh---HHHHHHHHc---CCCeE---eeCccHHHHHhc-------C
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPS---KEKEAKELL---GADEF---ILSTNAMQMQAG-------K 246 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~---~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~ 246 (360)
.++++||+|+ +++|.++++.+...|++|++++++.. +.+.+.+.+ |.... .|-.+.+..... .
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 89 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF 89 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 5789999999 99999999999999999999876543 344333322 32211 244444333222 3
Q ss_pred CCcCEEEEcCCCc-------------------------ccHHHHHHHhccCCEEEEeCCC
Q 018158 247 RTLDFILDTVSAK-------------------------HSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 247 ~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
.++|+++++.|.. ...+.++..|+.+|+++.++..
T Consensus 90 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~ 149 (262)
T 3ksu_A 90 GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATS 149 (262)
T ss_dssp CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCC
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEech
Confidence 5799999999832 0123334445567899998764
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0023 Score=55.09 Aligned_cols=75 Identities=16% Similarity=0.187 Sum_probs=54.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc-----C-CC-eE--eeCccHHHHHhc-------C
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL-----G-AD-EF--ILSTNAMQMQAG-------K 246 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~-----g-~~-~~--v~~~~~~~~~~~-------~ 246 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ + .. .. .|-.+.+..... .
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY 85 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence 5789999999 99999999988889999999999998876665533 2 11 11 244443332221 3
Q ss_pred CCcCEEEEcCCC
Q 018158 247 RTLDFILDTVSA 258 (360)
Q Consensus 247 ~~~d~vid~~g~ 258 (360)
.++|++++++|.
T Consensus 86 g~iD~lvnnAg~ 97 (250)
T 3nyw_A 86 GAVDILVNAAAM 97 (250)
T ss_dssp CCEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 579999999984
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0024 Score=55.18 Aligned_cols=75 Identities=13% Similarity=0.051 Sum_probs=54.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc-------C-CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG-------K-RT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~-~~ 248 (360)
.++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+ |.... .|-.+.+..... - .+
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~ 87 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK 87 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 99999999998889999999999988766554433 43211 244444333222 2 67
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|+++++.|.
T Consensus 88 id~lv~~Ag~ 97 (260)
T 2ae2_A 88 LNILVNNAGI 97 (260)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999983
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0023 Score=55.32 Aligned_cols=75 Identities=13% Similarity=0.100 Sum_probs=52.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC----------C-CeE--eeCccHHHHHhc----
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG----------A-DEF--ILSTNAMQMQAG---- 245 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g----------~-~~~--v~~~~~~~~~~~---- 245 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.+. . ... .|-.+.+.....
T Consensus 6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 85 (264)
T 2pd6_A 6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV 85 (264)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence 5789999999 999999999888899999999999887776654332 1 111 233443322221
Q ss_pred ---CCCc-CEEEEcCCC
Q 018158 246 ---KRTL-DFILDTVSA 258 (360)
Q Consensus 246 ---~~~~-d~vid~~g~ 258 (360)
-.++ |++|+++|.
T Consensus 86 ~~~~g~i~d~vi~~Ag~ 102 (264)
T 2pd6_A 86 QACFSRPPSVVVSCAGI 102 (264)
T ss_dssp HHHHSSCCSEEEECCCC
T ss_pred HHHhCCCCeEEEECCCc
Confidence 2355 999999884
|
| >2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0017 Score=57.94 Aligned_cols=95 Identities=13% Similarity=0.185 Sum_probs=68.1
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCe-E-eeCccHHHHHhcCCCcCEEEEc-
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADE-F-ILSTNAMQMQAGKRTLDFILDT- 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~-~-v~~~~~~~~~~~~~~~d~vid~- 255 (360)
++++++||-+|+|. |..+..+++..|++|++++.+++..+.+++++ |... + +...+. ......+|+|+..
T Consensus 88 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~fD~v~~~~ 163 (318)
T 2fk8_A 88 LKPGMTLLDIGCGW-GTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGW---EDFAEPVDRIVSIE 163 (318)
T ss_dssp CCTTCEEEEESCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCG---GGCCCCCSEEEEES
T ss_pred CCCcCEEEEEcccc-hHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCh---HHCCCCcCEEEEeC
Confidence 44899999999976 88888999888999999999999888887753 3211 1 111111 1223679999976
Q ss_pred ----CCC---cccHHHHHHHhccCCEEEEeCC
Q 018158 256 ----VSA---KHSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 256 ----~g~---~~~~~~~~~~l~~~G~~v~~g~ 280 (360)
.+. ...+..+.+.|+++|+++....
T Consensus 164 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 164 AFEHFGHENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp CGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred hHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 321 2346788899999999987643
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0016 Score=56.32 Aligned_cols=98 Identities=14% Similarity=0.158 Sum_probs=63.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVI-STSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~-~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|.++++.+...|++|+++ .++.++.+.+.+. .|.... .|-.+.+..... ..+
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE 86 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 5789999999 999999999998999999988 5555544443332 343221 244443333222 347
Q ss_pred cCEEEEcCCCc--------------------------ccHHHHHHHhccCCEEEEeCCC
Q 018158 249 LDFILDTVSAK--------------------------HSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 249 ~d~vid~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
+|+++++.|.. ...+.++..++++|+++.++..
T Consensus 87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~ 145 (259)
T 3edm_A 87 IHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQ 145 (259)
T ss_dssp EEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred CCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCH
Confidence 99999998732 0122333445567899998763
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0027 Score=54.75 Aligned_cols=74 Identities=14% Similarity=0.139 Sum_probs=50.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhH--HHHHHHHcCCCeE---eeCccHHHHHhc-------CCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSK--EKEAKELLGADEF---ILSTNAMQMQAG-------KRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~--~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~d 250 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++ .+.+.+ .|.... .|-.+.+..... ..++|
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIAR-HGVKAVHHPADLSDVAQIEALFALAEREFGGVD 81 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHT-TSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHh-cCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4789999999 999999999998899999999987651 122222 343222 244444333222 24799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|++.|.
T Consensus 82 ~lv~~Ag~ 89 (255)
T 2q2v_A 82 ILVNNAGI 89 (255)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999883
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0054 Score=53.85 Aligned_cols=75 Identities=12% Similarity=0.039 Sum_probs=52.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHH----cCCCeE---eeCcc----HHHHHhc-----
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSP-SKEKEAKEL----LGADEF---ILSTN----AMQMQAG----- 245 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~-~~~~~~~~~----~g~~~~---v~~~~----~~~~~~~----- 245 (360)
.++++||+|+ |++|.++++.+...|++|++++++. ++.+.+.+. .|.... .|-.+ .+.....
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~ 101 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF 101 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence 5789999999 9999999999888999999999987 665544332 343211 24444 3222221
Q ss_pred --CCCcCEEEEcCCC
Q 018158 246 --KRTLDFILDTVSA 258 (360)
Q Consensus 246 --~~~~d~vid~~g~ 258 (360)
..++|++|+++|.
T Consensus 102 ~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 102 RAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HhcCCCCEEEECCCC
Confidence 3479999999884
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0025 Score=54.34 Aligned_cols=74 Identities=18% Similarity=0.123 Sum_probs=51.7
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHH---cCCCe-E---eeCccHHHHHhc-------CCC
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVI-STSPSKEKEAKEL---LGADE-F---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~-~~~~~~~~~~~~~---~g~~~-~---v~~~~~~~~~~~-------~~~ 248 (360)
++++||+|+ |++|..+++.+...|++|+++ +++.++.+.+.+. .+... . .|-.+.+..... -.+
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 367999999 999999999998899999998 8887776654332 24321 1 244444333222 357
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|+++|.
T Consensus 81 ~d~li~~Ag~ 90 (245)
T 2ph3_A 81 LDTLVNNAGI 90 (245)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999874
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0024 Score=55.90 Aligned_cols=75 Identities=13% Similarity=0.114 Sum_probs=54.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|.++++.+...|++|+++++++++.+.+.+.+ |.... .|-.+.+..... -.++
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 100 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV 100 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999 99999999999999999999999988766544333 43221 244443332221 3479
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|+++|.
T Consensus 101 D~lv~~Ag~ 109 (277)
T 2rhc_B 101 DVLVNNAGR 109 (277)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999984
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0051 Score=53.70 Aligned_cols=75 Identities=17% Similarity=0.172 Sum_probs=52.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-------------ChhHHHHHHHH---cCCCeE---eeCccHHHHH
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIST-------------SPSKEKEAKEL---LGADEF---ILSTNAMQMQ 243 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~-------------~~~~~~~~~~~---~g~~~~---v~~~~~~~~~ 243 (360)
.++++||+|+ +++|.++++.+...|++|+++++ +.++.+.+.+. .+.... .|-.+.+...
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 89 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR 89 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 5889999999 99999999999999999999987 45555444332 343222 2444443332
Q ss_pred hc-------CCCcCEEEEcCCC
Q 018158 244 AG-------KRTLDFILDTVSA 258 (360)
Q Consensus 244 ~~-------~~~~d~vid~~g~ 258 (360)
.. ..++|+++++.|.
T Consensus 90 ~~~~~~~~~~g~id~lvnnAg~ 111 (277)
T 3tsc_A 90 KVVDDGVAALGRLDIIVANAGV 111 (277)
T ss_dssp HHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCC
Confidence 22 3579999999984
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0021 Score=55.25 Aligned_cols=75 Identities=15% Similarity=0.225 Sum_probs=55.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +.... .|-.+.+..... ..++
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGI 87 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 99999999999999999999999998877665533 32211 244443332222 3489
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|++.|.
T Consensus 88 d~li~~Ag~ 96 (253)
T 3qiv_A 88 DYLVNNAAI 96 (253)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCc
Confidence 999999985
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0056 Score=53.91 Aligned_cols=43 Identities=16% Similarity=0.050 Sum_probs=37.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEe-CChhHHHHHHH
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIS-TSPSKEKEAKE 226 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~-~~~~~~~~~~~ 226 (360)
.++++||+|+ |++|.++++.+...|++|++++ ++.++.+.+.+
T Consensus 8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~ 52 (291)
T 1e7w_A 8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSA 52 (291)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH
Confidence 5789999999 9999999999999999999999 99887665543
|
| >3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0029 Score=56.03 Aligned_cols=95 Identities=11% Similarity=0.044 Sum_probs=69.1
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC-eE-eeCccHHHHHhcCCCcCEEEEcC
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD-EF-ILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~~-v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
++++++||-+|+|. |..+..+++..|++|++++.+++..+.+++++ |.. .+ +...+.. .....+|+|+...
T Consensus 70 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~---~~~~~fD~v~~~~ 145 (302)
T 3hem_A 70 LEPGMTLLDIGCGW-GSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWE---EFDEPVDRIVSLG 145 (302)
T ss_dssp CCTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGG---GCCCCCSEEEEES
T ss_pred CCCcCEEEEeeccC-cHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHH---HcCCCccEEEEcc
Confidence 45999999999975 88889999998999999999999888887753 322 11 1112221 2267899998753
Q ss_pred CC---------------cccHHHHHHHhccCCEEEEeCC
Q 018158 257 SA---------------KHSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 257 g~---------------~~~~~~~~~~l~~~G~~v~~g~ 280 (360)
.- ...+..+.+.|+++|+++....
T Consensus 146 ~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 146 AFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp CGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred hHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 21 1347888999999999987654
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0027 Score=58.86 Aligned_cols=94 Identities=12% Similarity=0.193 Sum_probs=70.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhc-CCCcCEEEEcCCCccc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAG-KRTLDFILDTVSAKHS 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~-~~~~d~vid~~g~~~~ 261 (360)
.+..|+|+|.|.+|..+++.++..|.+|+++++++++.+.+++ .|...+ -|..+.+.+... -.++|+++-+++....
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~-~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~ 81 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK-FGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQT 81 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH-TTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh-CCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHH
Confidence 4567999999999999999999999999999999999999988 886433 255555555555 4789999999987654
Q ss_pred HHHHH---HHhccCCEEEEe
Q 018158 262 LGPIL---ELLKVNGTLSVV 278 (360)
Q Consensus 262 ~~~~~---~~l~~~G~~v~~ 278 (360)
...+. +.+.+.-+++..
T Consensus 82 n~~i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 82 NLQLTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp HHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEE
Confidence 33333 334455566554
|
| >3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0012 Score=55.77 Aligned_cols=94 Identities=19% Similarity=0.212 Sum_probs=68.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhc-CCCcCEEEEcCCCcccH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAG-KRTLDFILDTVSAKHSL 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~-~~~~d~vid~~g~~~~~ 262 (360)
++.+||-+|+|. |..+..+++. |.+|++++.++..++.++++.....++..+-.+..... ...+|+|+........+
T Consensus 48 ~~~~vLDiGcG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~~~~~l 125 (226)
T 3m33_A 48 PQTRVLEAGCGH-GPDAARFGPQ-AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRRGPTSVI 125 (226)
T ss_dssp TTCEEEEESCTT-SHHHHHHGGG-SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEESCCSGGG
T ss_pred CCCeEEEeCCCC-CHHHHHHHHc-CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCCCHHHHH
Confidence 789999999964 6777777777 88999999999999999885333333322221111112 45799999886666678
Q ss_pred HHHHHHhccCCEEEEeC
Q 018158 263 GPILELLKVNGTLSVVG 279 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g 279 (360)
..+.+.|+++|+++..+
T Consensus 126 ~~~~~~LkpgG~l~~~~ 142 (226)
T 3m33_A 126 LRLPELAAPDAHFLYVG 142 (226)
T ss_dssp GGHHHHEEEEEEEEEEE
T ss_pred HHHHHHcCCCcEEEEeC
Confidence 99999999999998443
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0014 Score=59.28 Aligned_cols=90 Identities=20% Similarity=0.189 Sum_probs=69.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCc----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAK---- 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~---- 259 (360)
.|+++.|+|.|.+|...++.++.+|++|++.+++....+.+.+ .|...+ .+ ..+.-...|+|+.++...
T Consensus 163 ~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~~---~~---l~ell~~aDvV~l~~Plt~~t~ 235 (351)
T 3jtm_A 163 EGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKE-TGAKFV---ED---LNEMLPKCDVIVINMPLTEKTR 235 (351)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHH-HCCEEC---SC---HHHHGGGCSEEEECSCCCTTTT
T ss_pred cCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHh-CCCeEc---CC---HHHHHhcCCEEEECCCCCHHHH
Confidence 5899999999999999999999999999999988766666666 775432 11 223345789999988732
Q ss_pred -ccHHHHHHHhccCCEEEEeCC
Q 018158 260 -HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 260 -~~~~~~~~~l~~~G~~v~~g~ 280 (360)
..-...+..|+++..+++++.
T Consensus 236 ~li~~~~l~~mk~gailIN~aR 257 (351)
T 3jtm_A 236 GMFNKELIGKLKKGVLIVNNAR 257 (351)
T ss_dssp TCBSHHHHHHSCTTEEEEECSC
T ss_pred HhhcHHHHhcCCCCCEEEECcC
Confidence 122678899999999998874
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0009 Score=57.86 Aligned_cols=75 Identities=19% Similarity=0.194 Sum_probs=48.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~d~v 252 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.++.... .|-.+.+..... ..++|++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 85 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGL 85 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999999 9999999999999999999999998877666554553211 244443332222 3479999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
++++|.
T Consensus 86 v~nAg~ 91 (257)
T 3tpc_A 86 VNCAGT 91 (257)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999884
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00058 Score=57.68 Aligned_cols=95 Identities=18% Similarity=0.187 Sum_probs=64.5
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe-EeeCccHHHHHhcCCCcCEEEEcCCCc----
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE-FILSTNAMQMQAGKRTLDFILDTVSAK---- 259 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~d~vid~~g~~---- 259 (360)
.+|||+|+ |.+|..+++.+...|.+|++++|++++...+.. +... ..|..+.+.+...-.++|+||.++|..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~ 82 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENE--HLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNNP 82 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCT--TEEEECCCTTCHHHHHHHHTTCSEEEECCCC-----
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccC--ceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCCh
Confidence 57999999 999999999999999999999999876432211 1111 124445555555556899999999753
Q ss_pred -------ccHHHHHHHhccC--CEEEEeCCCC
Q 018158 260 -------HSLGPILELLKVN--GTLSVVGAPE 282 (360)
Q Consensus 260 -------~~~~~~~~~l~~~--G~~v~~g~~~ 282 (360)
.....+++.++.. ++++.++...
T Consensus 83 ~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~ 114 (227)
T 3dhn_A 83 DIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG 114 (227)
T ss_dssp -CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence 1123455555544 4888887543
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0075 Score=52.73 Aligned_cols=75 Identities=15% Similarity=0.107 Sum_probs=52.9
Q ss_pred CCcEEEEEcC-Ch--HHHHHHHHHHHcCCeEEEEeCCh--hHHHHHHHHcCCCeE--eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GG--LGHVAVKFGKAFGHHVTVISTSP--SKEKEAKELLGADEF--ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~--vG~~aiqla~~~G~~V~~~~~~~--~~~~~~~~~~g~~~~--v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |. +|.++++.+...|++|++++++. +..+.+.+..+.... .|-.+.+..... ..++
T Consensus 25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 104 (280)
T 3nrc_A 25 AGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGL 104 (280)
T ss_dssp TTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence 5789999996 55 99999998889999999999987 566666553443222 244443332221 3579
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|+++|.
T Consensus 105 d~li~nAg~ 113 (280)
T 3nrc_A 105 DAIVHSIAF 113 (280)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCcc
Confidence 999999984
|
| >3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0023 Score=55.23 Aligned_cols=97 Identities=18% Similarity=0.239 Sum_probs=68.9
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC-C--eEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA-D--EFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~-~--~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
++++.+||-+|+| .|..+..+++..+++|++++.+++..+.+++++.. . .++.. +..........+|+|+....-
T Consensus 53 ~~~~~~vLdiG~G-~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~-d~~~~~~~~~~fD~v~~~~~l 130 (266)
T 3ujc_A 53 LNENSKVLDIGSG-LGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEAN-DILTKEFPENNFDLIYSRDAI 130 (266)
T ss_dssp CCTTCEEEEETCT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEEC-CTTTCCCCTTCEEEEEEESCG
T ss_pred CCCCCEEEEECCC-CCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEEC-ccccCCCCCCcEEEEeHHHHH
Confidence 4589999999997 58888888887799999999999999999884432 1 11211 111111124679999976432
Q ss_pred c--------ccHHHHHHHhccCCEEEEeCC
Q 018158 259 K--------HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 259 ~--------~~~~~~~~~l~~~G~~v~~g~ 280 (360)
. ..+..+.+.|+++|.++....
T Consensus 131 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 131 LALSLENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 2 236888899999999987753
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0011 Score=57.95 Aligned_cols=93 Identities=19% Similarity=0.206 Sum_probs=62.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-eEeeCccHHHHHhcC-CCcCEEEEcCCCccc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-EFILSTNAMQMQAGK-RTLDFILDTVSAKHS 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~~-~~~d~vid~~g~~~~ 261 (360)
.+++++|+|+|++|.+++..+...|.+|+++.|+.++.+.+.+.++.. .+ ...+. .... ..+|++|++++....
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~-~~~~~---~~~~~~~~DivIn~t~~~~~ 193 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNI-QAVSM---DSIPLQTYDLVINATSAGLS 193 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCE-EEEEG---GGCCCSCCSEEEECCCC---
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCe-EEeeH---HHhccCCCCEEEECCCCCCC
Confidence 578999999999999999988889999999999998887776655531 11 11111 1222 479999999986532
Q ss_pred HHH----HHHHhccCCEEEEeCCC
Q 018158 262 LGP----ILELLKVNGTLSVVGAP 281 (360)
Q Consensus 262 ~~~----~~~~l~~~G~~v~~g~~ 281 (360)
.. -...++++..++++...
T Consensus 194 -~~~~~i~~~~l~~~~~v~D~~y~ 216 (272)
T 1p77_A 194 -GGTASVDAEILKLGSAFYDMQYA 216 (272)
T ss_dssp -----CCCHHHHHHCSCEEESCCC
T ss_pred -CCCCCCCHHHcCCCCEEEEeeCC
Confidence 11 12345666677777653
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0062 Score=52.25 Aligned_cols=71 Identities=13% Similarity=0.137 Sum_probs=49.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeC-ccHHHHHhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILS-TNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~-~~~~~~~~~~~~~d~vid~~g~ 258 (360)
.++++||+|+ |++|.++++.+...|++|++++++++. +++ ++.... .|- .+.+.+.+.-.++|++|+++|.
T Consensus 18 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~---~~~-~~~~~~~~D~~~~~~~~~~~~~~iD~lv~~Ag~ 91 (249)
T 1o5i_A 18 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL---LKR-SGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGG 91 (249)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HHH-TCSEEEECCTTTCHHHHHHHSCCCSEEEECCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH---HHh-hCCeEEEeeHHHHHHHHHHHhcCCCEEEECCCC
Confidence 6889999999 999999999998899999999998743 333 452222 222 1112222223389999999984
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0056 Score=53.55 Aligned_cols=75 Identities=13% Similarity=0.139 Sum_probs=51.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC------------hhHHHHHHHH---cCCCeE---eeCccHHHHHh
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTS------------PSKEKEAKEL---LGADEF---ILSTNAMQMQA 244 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~------------~~~~~~~~~~---~g~~~~---v~~~~~~~~~~ 244 (360)
.++++||+|+ |++|.++++.+...|++|++++++ .++.+...+. .|.... .|-.+.+....
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 88 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES 88 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 5789999999 999999999999999999999986 4444333221 443322 24444433322
Q ss_pred c-------CCCcCEEEEcCCC
Q 018158 245 G-------KRTLDFILDTVSA 258 (360)
Q Consensus 245 ~-------~~~~d~vid~~g~ 258 (360)
. ..++|++++++|.
T Consensus 89 ~~~~~~~~~g~id~lv~nAg~ 109 (281)
T 3s55_A 89 FVAEAEDTLGGIDIAITNAGI 109 (281)
T ss_dssp HHHHHHHHHTCCCEEEECCCC
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 1 3479999999984
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0053 Score=52.48 Aligned_cols=73 Identities=21% Similarity=0.212 Sum_probs=47.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe--eCccHHHHH------hcCCCcCEEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI--LSTNAMQMQ------AGKRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v--~~~~~~~~~------~~~~~~d~vid 254 (360)
.++++||+|+ |++|.++++.+.. |++|++++++.++.+.+.+ ......+ |..+..... ..-.++|++|+
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~ 81 (245)
T 3e9n_A 4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-IEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVH 81 (245)
T ss_dssp --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-STTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-hcCCcceecccchHHHHHHHHHHHHhcCCCCEEEE
Confidence 4789999999 9999988887766 9999999999988877766 4322222 111111100 01247999999
Q ss_pred cCCC
Q 018158 255 TVSA 258 (360)
Q Consensus 255 ~~g~ 258 (360)
++|.
T Consensus 82 ~Ag~ 85 (245)
T 3e9n_A 82 AAAV 85 (245)
T ss_dssp CC--
T ss_pred CCCc
Confidence 9984
|
| >3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.012 Score=53.00 Aligned_cols=132 Identities=16% Similarity=0.133 Sum_probs=84.1
Q ss_pred cEEEEEcCChHHHHHHHHHH-H-cCCeE-EEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 186 KRIGIVGLGGLGHVAVKFGK-A-FGHHV-TVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~-~-~G~~V-~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
-+|.|+|+|.+|...++.++ . .++++ .+.++++++.+.+.+++|...+++ +.+.+. ...++|+|+.|++...+.
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~--~~~~~l-~~~~~D~V~i~tp~~~h~ 85 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT--NYKDMI-DTENIDAIFIVAPTPFHP 85 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES--CHHHHH-TTSCCSEEEECSCGGGHH
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC--CHHHHh-cCCCCCEEEEeCChHhHH
Confidence 57899999999998887776 4 46775 466788888877766588754432 222211 124799999999988777
Q ss_pred HHHHHHhccCCEEEEeCCCCCCcccChh---hH----hcc-CcEEE-EeecCCHHHHHHHHHHHhcCCCcc
Q 018158 263 GPILELLKVNGTLSVVGAPEAPFELPSF---PL----IFG-KRSVK-GSMTGGMRETQEMMNVCGKYNITC 324 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~-~~~i~-~~~~~~~~~~~~~~~~l~~~~l~~ 324 (360)
..+..+++.|..+ .+.. ++..+.. .+ ..+ ++.+. +........++.+.+++.+|.+-.
T Consensus 86 ~~~~~al~~G~~v-~~eK---p~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~~p~~~~~~~~i~~g~iG~ 152 (346)
T 3cea_A 86 EMTIYAMNAGLNV-FCEK---PLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKIVDNGDIGK 152 (346)
T ss_dssp HHHHHHHHTTCEE-EECS---CCCSCHHHHHHHHHHHHTCTTSCEECCCGGGTCHHHHHHHHHHHTTTTCS
T ss_pred HHHHHHHHCCCEE-EEcC---CCCCCHHHHHHHHHHHHhCCCCeEEEecccccCHHHHHHHHHHHcCCCCC
Confidence 8888888887544 4432 2222222 12 123 44443 233333345788888898887744
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.012 Score=49.52 Aligned_cols=117 Identities=15% Similarity=0.058 Sum_probs=70.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS-KEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~-~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
.|++|||+|+|.+|...++.+...|++|+++++... .+..+.+ .|.-..+. ... ....-.++|+||-+++.....
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~-~~~i~~i~-~~~--~~~dL~~adLVIaAT~d~~~N 105 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEA-KGQLRVKR-KKV--GEEDLLNVFFIVVATNDQAVN 105 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHH-TTSCEEEC-SCC--CGGGSSSCSEEEECCCCTHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH-cCCcEEEE-CCC--CHhHhCCCCEEEECCCCHHHH
Confidence 688999999999999999999999999999987643 3444444 34222221 111 011235799999999988654
Q ss_pred HHHHHHhccCCEEEEeCCCCCCcccChhhH-hccCcEEEEeecC
Q 018158 263 GPILELLKVNGTLSVVGAPEAPFELPSFPL-IFGKRSVKGSMTG 305 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~ 305 (360)
..+... +..|..|.+-..+...++-...+ -...+++.-+..+
T Consensus 106 ~~I~~~-ak~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST~G 148 (223)
T 3dfz_A 106 KFVKQH-IKNDQLVNMASSFSDGNIQIPAQFSRGRLSLAISTDG 148 (223)
T ss_dssp HHHHHH-SCTTCEEEC-----CCSEECCEEEEETTEEEEEECTT
T ss_pred HHHHHH-HhCCCEEEEeCCcccCeEEEeeEEEeCCEEEEEECCC
Confidence 444444 44788887765443333332222 3344565555443
|
| >3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0017 Score=53.41 Aligned_cols=98 Identities=14% Similarity=0.130 Sum_probs=67.6
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHc---CC-C-eEeeCccHHHHH-hcCCCcCEEE
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFG--HHVTVISTSPSKEKEAKELL---GA-D-EFILSTNAMQMQ-AGKRTLDFIL 253 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G--~~V~~~~~~~~~~~~~~~~~---g~-~-~~v~~~~~~~~~-~~~~~~d~vi 253 (360)
++++++||-+|+|. |..+..+++..+ .+|++++.+++..+.+++++ |. . -.+...+..... .....+|+|+
T Consensus 20 ~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 20 VKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp CCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred CCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEE
Confidence 34899999999975 788888888864 58999999999888877653 32 1 112222222222 2346799998
Q ss_pred EcCCC---------------cccHHHHHHHhccCCEEEEeCC
Q 018158 254 DTVSA---------------KHSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 254 d~~g~---------------~~~~~~~~~~l~~~G~~v~~g~ 280 (360)
...+. ...+..+.+.|+++|+++....
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 99 FNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp EEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 65532 1357889999999999987643
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.005 Score=53.70 Aligned_cols=99 Identities=15% Similarity=0.205 Sum_probs=65.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC------------hhHHHHHHHH---cCCCeE---eeCccHHHHHh
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTS------------PSKEKEAKEL---LGADEF---ILSTNAMQMQA 244 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~------------~~~~~~~~~~---~g~~~~---v~~~~~~~~~~ 244 (360)
.|+++||+|+ |++|.++++.+...|++|++++++ .++.+...+. .+.... .|-.+.+....
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 91 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA 91 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 5889999999 999999999999999999999987 5544443322 343322 24444433322
Q ss_pred c-------CCCcCEEEEcCCCcc---------------------cHHHHHHHhcc---CCEEEEeCCCC
Q 018158 245 G-------KRTLDFILDTVSAKH---------------------SLGPILELLKV---NGTLSVVGAPE 282 (360)
Q Consensus 245 ~-------~~~~d~vid~~g~~~---------------------~~~~~~~~l~~---~G~~v~~g~~~ 282 (360)
. ..++|++|+++|... ..+.++..|.. +|+++.++...
T Consensus 92 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~ 160 (278)
T 3sx2_A 92 ALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSA 160 (278)
T ss_dssp HHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGG
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHH
Confidence 2 347999999998421 12334444432 68999997644
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0015 Score=56.30 Aligned_cols=93 Identities=20% Similarity=0.209 Sum_probs=62.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHh-------cCCCcCEEEEc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQA-------GKRTLDFILDT 255 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~-------~~~~~d~vid~ 255 (360)
-++++||+|+ |++|.++++.+...|++|++++++.++... ....++-.+.+.... ...++|++|++
T Consensus 21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~------~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~ 94 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD------HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCA 94 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS------EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 5789999999 999999999999999999999998764321 111223333322211 14579999999
Q ss_pred CCCc-------c-------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 256 VSAK-------H-------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 256 ~g~~-------~-------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+|.. . ..+.+...++++|+++.++...
T Consensus 95 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~ 147 (251)
T 3orf_A 95 AGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASA 147 (251)
T ss_dssp CCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred CccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechh
Confidence 9831 0 1234455666778999997654
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0066 Score=53.65 Aligned_cols=75 Identities=23% Similarity=0.205 Sum_probs=52.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC------------hhHHHHHHHH---cCCCeE---eeCccHHHHHh
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTS------------PSKEKEAKEL---LGADEF---ILSTNAMQMQA 244 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~------------~~~~~~~~~~---~g~~~~---v~~~~~~~~~~ 244 (360)
.++++||+|+ +++|.++++.+...|++|++++++ .++++.+.+. .|.... .|-.+.+....
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 106 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQA 106 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence 6889999999 999999999999999999999876 4544443322 443322 24444433322
Q ss_pred c-------CCCcCEEEEcCCC
Q 018158 245 G-------KRTLDFILDTVSA 258 (360)
Q Consensus 245 ~-------~~~~d~vid~~g~ 258 (360)
. ..++|++|++.|.
T Consensus 107 ~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 107 AVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHhCCCCEEEECCCC
Confidence 1 3579999999873
|
| >3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0024 Score=51.90 Aligned_cols=96 Identities=15% Similarity=0.198 Sum_probs=65.9
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC--eEeeCccHHHHH-hcCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD--EFILSTNAMQMQ-AGKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~--~~v~~~~~~~~~-~~~~~~d~vid~ 255 (360)
++++++||-+|+|. |..+..+++. +.+|++++.+++..+.+++++ |.+ .++. .+..... .....+|+|+-.
T Consensus 20 ~~~~~~vLDiGcG~-G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~~~~~l~~~~~~~fD~v~~~ 96 (185)
T 3mti_A 20 LDDESIVVDATMGN-GNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELIL-DGHENLDHYVREPIRAAIFN 96 (185)
T ss_dssp CCTTCEEEESCCTT-SHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEE-SCGGGGGGTCCSCEEEEEEE
T ss_pred CCCCCEEEEEcCCC-CHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-CcHHHHHhhccCCcCEEEEe
Confidence 34899999999874 7888888888 889999999999888777653 322 2232 2222221 124679999865
Q ss_pred CCCc---------------ccHHHHHHHhccCCEEEEeCC
Q 018158 256 VSAK---------------HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 256 ~g~~---------------~~~~~~~~~l~~~G~~v~~g~ 280 (360)
.+.- ..+..+.+.|++||+++.+..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 97 LGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp EC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 3211 234788899999999987643
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0051 Score=53.50 Aligned_cols=75 Identities=19% Similarity=0.212 Sum_probs=52.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIST-SPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~-~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|.++++.+...|++|+++++ +.++.+.+.+. .|.... .|-.+.+..... ..+
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~ 106 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGR 106 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999 99999999999999999999888 55555444332 343322 244444333221 347
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|+++|.
T Consensus 107 id~lv~nAg~ 116 (269)
T 4dmm_A 107 LDVLVNNAGI 116 (269)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0057 Score=48.16 Aligned_cols=77 Identities=21% Similarity=0.137 Sum_probs=55.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHc--CCCeEe-eCccHHHHHhc-CCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTS-PSKEKEAKELL--GADEFI-LSTNAMQMQAG-KRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~-~~~~~~~~~~~--g~~~~v-~~~~~~~~~~~-~~~~d~vid~~g~ 258 (360)
..++++|+|+|.+|...++.+...|.+|++++++ +++.+.+.+.+ |...+. |..+.+.+... -.++|+++-+++.
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDN 81 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCC
Confidence 3567899999999999999999999999999997 56665555433 332221 33444444443 5789999999987
Q ss_pred cc
Q 018158 259 KH 260 (360)
Q Consensus 259 ~~ 260 (360)
..
T Consensus 82 d~ 83 (153)
T 1id1_A 82 DA 83 (153)
T ss_dssp HH
T ss_pred hH
Confidence 64
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0036 Score=54.60 Aligned_cols=75 Identities=16% Similarity=0.140 Sum_probs=51.9
Q ss_pred CCcEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCChh---HHHHHHHHcCCCeE--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL---GGLGHVAVKFGKAFGHHVTVISTSPS---KEKEAKELLGADEF--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga---g~vG~~aiqla~~~G~~V~~~~~~~~---~~~~~~~~~g~~~~--v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|.++++.+...|++|++++++.+ ..+.+.+..+.... .|-.+.+..... ..+
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 84 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS 84 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999987 59999999998889999999998875 44444443452222 244444333221 347
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|++.|.
T Consensus 85 id~lv~nAg~ 94 (275)
T 2pd4_A 85 LDFIVHSVAF 94 (275)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCcc
Confidence 9999999984
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0053 Score=53.73 Aligned_cols=75 Identities=16% Similarity=0.132 Sum_probs=51.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIST-SPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~-~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|.++++.+...|++|+++++ +.++.+.+.+. .|.... .|-.+.+..... ..+
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 107 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGR 107 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 6789999999 99999999999999999999985 66655544332 343322 233333222221 347
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|+++|.
T Consensus 108 iD~lvnnAg~ 117 (280)
T 4da9_A 108 IDCLVNNAGI 117 (280)
T ss_dssp CCEEEEECC-
T ss_pred CCEEEECCCc
Confidence 9999999985
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0031 Score=55.11 Aligned_cols=75 Identities=15% Similarity=0.124 Sum_probs=54.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC--CeE---eeCccHHHHHhc-------CCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA--DEF---ILSTNAMQMQAG-------KRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~--~~~---v~~~~~~~~~~~-------~~~~d 250 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+.. ... .|-.+.+..... ..++|
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 107 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLD 107 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 5789999999 9999999999999999999999998877665543421 111 233333322221 35799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++|+++|.
T Consensus 108 ~lvnnAg~ 115 (276)
T 2b4q_A 108 ILVNNAGT 115 (276)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999983
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0037 Score=53.83 Aligned_cols=74 Identities=11% Similarity=0.013 Sum_probs=51.1
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHH--HcCCC-eEeeCccHHHH-Hh---cCCCcCEEEEcCC
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKE--LLGAD-EFILSTNAMQM-QA---GKRTLDFILDTVS 257 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~--~~g~~-~~v~~~~~~~~-~~---~~~~~d~vid~~g 257 (360)
+++||+|+ |++|.++++.+...|++|++++++.++.+.+.+ ..|.+ ..++..+.... .. ...++|++|++.|
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~nAg 81 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI 81 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence 46899999 999999999999999999999998876655433 13432 22233333222 11 1357999999987
Q ss_pred Cc
Q 018158 258 AK 259 (360)
Q Consensus 258 ~~ 259 (360)
..
T Consensus 82 ~~ 83 (254)
T 1zmt_A 82 FA 83 (254)
T ss_dssp CC
T ss_pred cC
Confidence 43
|
| >1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0032 Score=56.80 Aligned_cols=48 Identities=21% Similarity=0.309 Sum_probs=40.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE 232 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~ 232 (360)
.|++|.|.|.|.+|+.+++.++..|++|++.+.+.++.+.+++ +|++.
T Consensus 174 ~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~-~ga~~ 221 (355)
T 1c1d_A 174 DGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVA-LGHTA 221 (355)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHh-cCCEE
Confidence 7899999999999999999999999999999988776445555 77643
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0025 Score=55.78 Aligned_cols=75 Identities=16% Similarity=0.154 Sum_probs=53.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ |.... .|-.+.+..... ..++
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 102 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPI 102 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 6789999999 99999999988889999999999998776665433 33222 244444332221 3579
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|+++|.
T Consensus 103 d~lv~nAg~ 111 (279)
T 3sju_A 103 GILVNSAGR 111 (279)
T ss_dssp CEEEECCCC
T ss_pred cEEEECCCC
Confidence 999999984
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0017 Score=57.30 Aligned_cols=75 Identities=16% Similarity=0.209 Sum_probs=54.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC---CeE----eeCccHHHHHh-------cCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA---DEF----ILSTNAMQMQA-------GKRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~---~~~----v~~~~~~~~~~-------~~~~ 248 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+.. ..+ .|-.+.+.... ...+
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 119 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA 119 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999 9999999999999999999999999887766554431 111 24444333222 1357
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|+++|.
T Consensus 120 iD~lvnnAg~ 129 (293)
T 3rih_A 120 LDVVCANAGI 129 (293)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0014 Score=57.03 Aligned_cols=87 Identities=17% Similarity=0.214 Sum_probs=65.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc---
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH--- 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~--- 260 (360)
.+ +++|+|+|.+|.+.+..+...|++|++.+++.++.+.+.+.+|.. . .+ ..+. .++|+|+.|++...
T Consensus 116 ~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~--~--~~---~~~~-~~~Divi~~tp~~~~~~ 186 (263)
T 2d5c_A 116 KG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR--A--VP---LEKA-REARLLVNATRVGLEDP 186 (263)
T ss_dssp CS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE--E--CC---GGGG-GGCSEEEECSSTTTTCT
T ss_pred CC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc--h--hh---Hhhc-cCCCEEEEccCCCCCCC
Confidence 46 899999999999999999999999999999998877776657753 2 12 2234 67999999998652
Q ss_pred ---cHHHHHHHhccCCEEEEeCCC
Q 018158 261 ---SLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 261 ---~~~~~~~~l~~~G~~v~~g~~ 281 (360)
.+. ...++++..+++++..
T Consensus 187 ~~~~l~--~~~l~~g~~viD~~~~ 208 (263)
T 2d5c_A 187 SASPLP--AELFPEEGAAVDLVYR 208 (263)
T ss_dssp TCCSSC--GGGSCSSSEEEESCCS
T ss_pred CCCCCC--HHHcCCCCEEEEeecC
Confidence 121 3567778788787653
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0048 Score=55.14 Aligned_cols=75 Identities=16% Similarity=0.144 Sum_probs=51.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC---------ChhHHHHHHHH---cCCCeEeeCccHHHHHh------
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIST---------SPSKEKEAKEL---LGADEFILSTNAMQMQA------ 244 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~---------~~~~~~~~~~~---~g~~~~v~~~~~~~~~~------ 244 (360)
.++++||+|+ |++|..+++.+...|++|+++++ +.++.+.+.+. .+...+.|..+.+....
T Consensus 8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~ 87 (319)
T 1gz6_A 8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL 87 (319)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence 5789999999 99999999999889999999753 45554443322 34444455555432211
Q ss_pred -cCCCcCEEEEcCCC
Q 018158 245 -GKRTLDFILDTVSA 258 (360)
Q Consensus 245 -~~~~~d~vid~~g~ 258 (360)
...++|++|++.|.
T Consensus 88 ~~~g~iD~lVnnAG~ 102 (319)
T 1gz6_A 88 DTFGRIDVVVNNAGI 102 (319)
T ss_dssp HHTSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 14579999999983
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0064 Score=52.99 Aligned_cols=75 Identities=16% Similarity=0.176 Sum_probs=50.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH--cCCCeE---eeCccHHHHHhc------CCCcCE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL--LGADEF---ILSTNAMQMQAG------KRTLDF 251 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~--~g~~~~---v~~~~~~~~~~~------~~~~d~ 251 (360)
.|+++||+|+ |++|.++++.+...|++|+++++++...+.+.+. .+.... .|-.+.+..... ..++|+
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~ 109 (273)
T 3uf0_A 30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDV 109 (273)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcE
Confidence 5889999999 9999999999999999999999765433333331 232211 233343322221 257999
Q ss_pred EEEcCCC
Q 018158 252 ILDTVSA 258 (360)
Q Consensus 252 vid~~g~ 258 (360)
+|+++|.
T Consensus 110 lv~nAg~ 116 (273)
T 3uf0_A 110 LVNNAGI 116 (273)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999984
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0033 Score=54.14 Aligned_cols=75 Identities=17% Similarity=0.162 Sum_probs=53.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+. .+.... .|-.+.+..... ..++
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 91 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV 91 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 9999999999888999999999998776544332 243211 244443333222 2479
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|+++|.
T Consensus 92 d~vi~~Ag~ 100 (260)
T 3awd_A 92 DILVACAGI 100 (260)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999873
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0035 Score=56.68 Aligned_cols=169 Identities=12% Similarity=0.032 Sum_probs=98.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHc-CC-eEEEEeCChhHHHHHHHHcCCC--e--EeeCccHHHHHhcCCCcCEEEEcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAF-GH-HVTVISTSPSKEKEAKELLGAD--E--FILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~-G~-~V~~~~~~~~~~~~~~~~~g~~--~--~v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
.+++|||+|+ |.+|..+++.+... |. +|+++++++.+...+.+.+... . ..|..+.+.+...-.++|+||.++
T Consensus 20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~A 99 (344)
T 2gn4_A 20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHAA 99 (344)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEECC
Confidence 5789999999 99999999888888 98 9999999988877665544321 1 124455555555566899999999
Q ss_pred CCccc-----------------HHHHHHHhccC--CEEEEeCCCCCCcccCh--------hhH---hc-----cCcEEEE
Q 018158 257 SAKHS-----------------LGPILELLKVN--GTLSVVGAPEAPFELPS--------FPL---IF-----GKRSVKG 301 (360)
Q Consensus 257 g~~~~-----------------~~~~~~~l~~~--G~~v~~g~~~~~~~~~~--------~~~---~~-----~~~~i~~ 301 (360)
+.... ...+++.+.+. ++++.++......+... ..+ .. .++.+..
T Consensus 100 a~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~ 179 (344)
T 2gn4_A 100 ALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANPINLYGATKLCSDKLFVSANNFKGSSQTQFSV 179 (344)
T ss_dssp CCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSCCSHHHHHHHHHHHHHHHGGGCCCSSCCEEEE
T ss_pred CCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCCccHHHHHHHHHHHHHHHHHHHhCCCCcEEEE
Confidence 85320 12233444433 58888875332111111 111 11 2344443
Q ss_pred eec----CC-HHHHHHHHHHHhcCC--Cc---c-ce-EEECCccHHHHHHHHHcCCCceeEEE
Q 018158 302 SMT----GG-MRETQEMMNVCGKYN--IT---C-NI-EVIKPDQINEALDRLARNDVRYRFVI 352 (360)
Q Consensus 302 ~~~----~~-~~~~~~~~~~l~~~~--l~---~-~i-~~~~~~~~~~a~~~~~~~~~~gkvvi 352 (360)
.+. +. ...+..+.+.+.++. +. + .. ...+.+|+.+++..+.+....|++..
T Consensus 180 vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~~~g~~~~ 242 (344)
T 2gn4_A 180 VRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGEIFV 242 (344)
T ss_dssp ECCCEETTCTTSHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHCCSSCEEE
T ss_pred EEeccEECCCCCHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhccCCCEEe
Confidence 322 11 122455556666665 21 1 12 34677888888866554333455543
|
| >2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0017 Score=55.11 Aligned_cols=95 Identities=15% Similarity=0.230 Sum_probs=67.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHc---CCC---eEeeCccHHHHHhc--CCCcCEEEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKELL---GAD---EFILSTNAMQMQAG--KRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~--~~~~d~vid 254 (360)
++++||-+|+| .|..++.+++.. +.+|++++.+++..+.+++.+ |.. .++..+..+..... ...+|+|+.
T Consensus 54 ~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 54 APARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp CCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred CCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 78899999997 688888899887 679999999999888887753 432 22222222212222 467999987
Q ss_pred cCCC---cccHHHHHHHhccCCEEEEeC
Q 018158 255 TVSA---KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 255 ~~g~---~~~~~~~~~~l~~~G~~v~~g 279 (360)
.... ...+..+.+.|+++|.++...
T Consensus 133 ~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 133 DAAKGQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EGGGSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred CCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 6553 234678888999999998763
|
| >1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0038 Score=52.87 Aligned_cols=96 Identities=15% Similarity=0.133 Sum_probs=66.4
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcCC-CeE--e--eCccHHHHHhcCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGA-DEF--I--LSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g~-~~~--v--~~~~~~~~~~~~~~~d~vid~ 255 (360)
++++++||-+|+|. |..+..+++..| .+|++++.+++..+.++++... ..+ + +..+..........+|+|+..
T Consensus 72 ~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (230)
T 1fbn_A 72 IKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYED 150 (230)
T ss_dssp CCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEEC
T ss_pred CCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEEe
Confidence 45899999999976 888889998876 5899999999988887774331 111 1 111111001123579999965
Q ss_pred CCCc----ccHHHHHHHhccCCEEEEe
Q 018158 256 VSAK----HSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 256 ~g~~----~~~~~~~~~l~~~G~~v~~ 278 (360)
.... ..+..+.+.|+++|+++..
T Consensus 151 ~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 151 VAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp CCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 5443 2378888999999999886
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0068 Score=52.04 Aligned_cols=99 Identities=13% Similarity=0.147 Sum_probs=63.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCe-EEEEeCCh--hHHHHHHHHcCCCeE----eeCccH-HHHHhc-------CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHH-VTVISTSP--SKEKEAKELLGADEF----ILSTNA-MQMQAG-------KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~-V~~~~~~~--~~~~~~~~~~g~~~~----v~~~~~-~~~~~~-------~~ 247 (360)
.+++++|+|+ |++|..+++.+...|++ |++++++. +..+.+.+..+...+ .|-.+. +..... ..
T Consensus 4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 83 (254)
T 1sby_A 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence 5789999999 99999999999999996 99999876 344555552321111 233332 222111 24
Q ss_pred CcCEEEEcCCCcc-----------------cHHHHHHHhcc-----CCEEEEeCCCC
Q 018158 248 TLDFILDTVSAKH-----------------SLGPILELLKV-----NGTLSVVGAPE 282 (360)
Q Consensus 248 ~~d~vid~~g~~~-----------------~~~~~~~~l~~-----~G~~v~~g~~~ 282 (360)
++|++|+++|... ..+.+...+.. +|+++.++...
T Consensus 84 ~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~ 140 (254)
T 1sby_A 84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVT 140 (254)
T ss_dssp CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGG
T ss_pred CCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchh
Confidence 7999999998421 12334444532 57899987643
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0056 Score=52.14 Aligned_cols=74 Identities=16% Similarity=0.187 Sum_probs=51.0
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCCc
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVI-STSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~-~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
|+++||+|+ |++|..+++.+...|++|+++ .++.++.+.+.+. .+.... .|-.+.+..... ..++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI 80 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999 999999999999999999984 7887766554332 243211 244443333222 3479
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|++.|.
T Consensus 81 d~li~~Ag~ 89 (244)
T 1edo_A 81 DVVVNNAGI 89 (244)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999874
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0027 Score=54.37 Aligned_cols=74 Identities=14% Similarity=0.105 Sum_probs=53.2
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc----CCCe---EeeCccHHHHHhc-------CCCc
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL----GADE---FILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g~~~---~v~~~~~~~~~~~-------~~~~ 249 (360)
++++||+|+ |++|..++..+...|++|++++++.++.+.+.+.+ +... ..|-.+.+..... ..++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI 81 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 578999999 99999999998889999999999988777665434 3221 1244443333222 2479
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|+++|.
T Consensus 82 d~li~~Ag~ 90 (250)
T 2cfc_A 82 DVLVNNAGI 90 (250)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999873
|
| >2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0019 Score=57.57 Aligned_cols=88 Identities=26% Similarity=0.334 Sum_probs=67.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc---
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH--- 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~--- 260 (360)
.|+++.|+|.|.+|...++.++..|++|++.+++.++. .+++ +|... . +. .+.-...|+|+.++....
T Consensus 141 ~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~-~g~~~-~---~l---~ell~~aDvVvl~~P~~~~t~ 211 (313)
T 2ekl_A 141 AGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIRE-KAEK-INAKA-V---SL---EELLKNSDVISLHVTVSKDAK 211 (313)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHH-TTCEE-C---CH---HHHHHHCSEEEECCCCCTTSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchh-HHHh-cCcee-c---CH---HHHHhhCCEEEEeccCChHHH
Confidence 68999999999999999999999999999999988764 4555 77642 1 22 122346899999887432
Q ss_pred -cH-HHHHHHhccCCEEEEeCC
Q 018158 261 -SL-GPILELLKVNGTLSVVGA 280 (360)
Q Consensus 261 -~~-~~~~~~l~~~G~~v~~g~ 280 (360)
.+ ...+..|++++.+++++.
T Consensus 212 ~li~~~~l~~mk~ga~lIn~ar 233 (313)
T 2ekl_A 212 PIIDYPQFELMKDNVIIVNTSR 233 (313)
T ss_dssp CSBCHHHHHHSCTTEEEEESSC
T ss_pred HhhCHHHHhcCCCCCEEEECCC
Confidence 22 567789999999998875
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0057 Score=54.91 Aligned_cols=43 Identities=16% Similarity=0.050 Sum_probs=37.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEe-CChhHHHHHHH
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIS-TSPSKEKEAKE 226 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~-~~~~~~~~~~~ 226 (360)
.++++||+|+ |++|.++++.+...|++|++++ ++.++.+.+.+
T Consensus 45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~ 89 (328)
T 2qhx_A 45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSA 89 (328)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Confidence 5789999999 9999999999999999999999 99887766544
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.005 Score=52.53 Aligned_cols=75 Identities=15% Similarity=0.141 Sum_probs=49.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVI-STSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~-~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|..+++.+...|++|+++ .+++++.+.+.+. .+.... .|-.+.+..... ..+
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR 83 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 4789999999 999999999999999999998 5665554443332 343221 244444333222 247
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|+++|.
T Consensus 84 ~d~vi~~Ag~ 93 (247)
T 2hq1_A 84 IDILVNNAGI 93 (247)
T ss_dssp CCEEEECC--
T ss_pred CCEEEECCCC
Confidence 9999999874
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0029 Score=54.15 Aligned_cols=75 Identities=15% Similarity=0.198 Sum_probs=54.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~-------~~~~~ 249 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +.... .|-.+.+.... ...++
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI 83 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 99999999988889999999999988776654433 43222 24444333222 14579
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|+++|.
T Consensus 84 d~li~~Ag~ 92 (247)
T 3lyl_A 84 DILVNNAGI 92 (247)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999984
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0079 Score=52.40 Aligned_cols=100 Identities=19% Similarity=0.197 Sum_probs=64.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhH-------HHHHHHH---cCCCeE---eeCccHHHHHhc----
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSK-------EKEAKEL---LGADEF---ILSTNAMQMQAG---- 245 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~-------~~~~~~~---~g~~~~---v~~~~~~~~~~~---- 245 (360)
.++++||+|+ +++|.++++.+...|++|++++++.++ ++...+. .|.... .|-.+.+.....
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 84 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT 84 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 5789999999 999999999888999999999988643 2222111 343222 244444332221
Q ss_pred ---CCCcCEEEEcCCCcc-------------------------cHHHHHHHhc--cCCEEEEeCCCCC
Q 018158 246 ---KRTLDFILDTVSAKH-------------------------SLGPILELLK--VNGTLSVVGAPEA 283 (360)
Q Consensus 246 ---~~~~d~vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~ 283 (360)
..++|+++++.|... ..+.++..|+ .+|+++.++....
T Consensus 85 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~ 152 (274)
T 3e03_A 85 VDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPS 152 (274)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHh
Confidence 357999999998420 1234445554 3589999977553
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0026 Score=54.31 Aligned_cols=75 Identities=16% Similarity=0.214 Sum_probs=53.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH----cCCCeE---eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL----LGADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~----~g~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+. .+.... .|..+.+..... ..+
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG 85 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 5788999999 9999999999888999999999998876655432 243221 244444333222 347
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|+++|.
T Consensus 86 ~d~vi~~Ag~ 95 (248)
T 2pnf_A 86 IDILVNNAGI 95 (248)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999884
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0025 Score=55.84 Aligned_cols=75 Identities=20% Similarity=0.207 Sum_probs=54.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC--eE----eeCccHHHHHhc-------C
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD--EF----ILSTNAMQMQAG-------K 246 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~--~~----v~~~~~~~~~~~-------~ 246 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ +.. .+ .|-.+.+..... .
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH 89 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 5789999999 99999999998899999999999988776655433 320 11 244443332221 3
Q ss_pred CCcCEEEEcCCC
Q 018158 247 RTLDFILDTVSA 258 (360)
Q Consensus 247 ~~~d~vid~~g~ 258 (360)
.++|++++++|.
T Consensus 90 g~id~lv~nAg~ 101 (281)
T 3svt_A 90 GRLHGVVHCAGG 101 (281)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 579999999985
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0036 Score=54.99 Aligned_cols=74 Identities=24% Similarity=0.232 Sum_probs=51.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhH-------H----HHHHHHcCCCeE---eeCccHHHHHhc---
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSK-------E----KEAKELLGADEF---ILSTNAMQMQAG--- 245 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~-------~----~~~~~~~g~~~~---v~~~~~~~~~~~--- 245 (360)
.++++||+|+ +++|.++++.+...|++|++++++.++ + +.+.+ .+.... .|-.+.+.....
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~ 86 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEE-AGGQALPIVGDIRDGDAVAAAVAK 86 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHH-HTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHH
Confidence 5789999999 999999999988899999999998752 2 22333 443222 244444333222
Q ss_pred ----CCCcCEEEEcCCC
Q 018158 246 ----KRTLDFILDTVSA 258 (360)
Q Consensus 246 ----~~~~d~vid~~g~ 258 (360)
..++|++|+++|.
T Consensus 87 ~~~~~g~id~lvnnAg~ 103 (285)
T 3sc4_A 87 TVEQFGGIDICVNNASA 103 (285)
T ss_dssp HHHHHSCCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 3489999999984
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.004 Score=53.98 Aligned_cols=75 Identities=13% Similarity=0.109 Sum_probs=51.5
Q ss_pred CCcEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCCh---hHHHHHHHHcCCCeE--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL---GGLGHVAVKFGKAFGHHVTVISTSP---SKEKEAKELLGADEF--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga---g~vG~~aiqla~~~G~~V~~~~~~~---~~~~~~~~~~g~~~~--v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|.++++.+...|++|++++++. +..+.+.+..+.... .|-.+.+..... ..+
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 87 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK 87 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5788999987 5999999999888999999999886 344444443443222 244444333221 247
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|+++|.
T Consensus 88 iD~lv~~Ag~ 97 (265)
T 1qsg_A 88 FDGFVHSIGF 97 (265)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0068 Score=54.09 Aligned_cols=75 Identities=21% Similarity=0.190 Sum_probs=51.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC------------hhHHHHHHHH---cCCCeE---eeCccHHHHHh
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTS------------PSKEKEAKEL---LGADEF---ILSTNAMQMQA 244 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~------------~~~~~~~~~~---~g~~~~---v~~~~~~~~~~ 244 (360)
.++++||+|+ |++|.++++.+...|++|++++++ .++++.+.+. .|.... .|-.+.+....
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 124 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA 124 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 5789999999 999999999999999999999875 4444433221 343322 24444333322
Q ss_pred c-------CCCcCEEEEcCCC
Q 018158 245 G-------KRTLDFILDTVSA 258 (360)
Q Consensus 245 ~-------~~~~d~vid~~g~ 258 (360)
. ..++|++|+++|.
T Consensus 125 ~~~~~~~~~g~iD~lVnnAg~ 145 (317)
T 3oec_A 125 VVDEALAEFGHIDILVSNVGI 145 (317)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 1 3589999999984
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0027 Score=54.83 Aligned_cols=75 Identities=16% Similarity=0.131 Sum_probs=53.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ |.... .|-.+.+..... ..++
T Consensus 13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 92 (260)
T 2zat_A 13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV 92 (260)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 99999999999999999999999988765544322 43221 233333322221 3479
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++|++.|.
T Consensus 93 D~lv~~Ag~ 101 (260)
T 2zat_A 93 DILVSNAAV 101 (260)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999884
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0014 Score=57.06 Aligned_cols=97 Identities=12% Similarity=0.069 Sum_probs=72.5
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcCC-hHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLG-GLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag-~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+.......+++...-- .|++++|+|.| .+|.-+++++...|++|+++.+....+...
T Consensus 137 ~~~PcTp~gi~~ll~~~~i~l--~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~--------------- 199 (288)
T 1b0a_A 137 RLRPCTPRGIVTLLERYNIDT--FGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHH--------------- 199 (288)
T ss_dssp SSCCHHHHHHHHHHHHTTCCC--TTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHH---------------
T ss_pred CCCCCcHHHHHHHHHHcCCCC--CCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHHH---------------
Confidence 457777777777777766433 79999999996 689999999999999999998655333222
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
-+.+|++|.++|....+.. +++++|..++++|...
T Consensus 200 ------~~~ADIVI~Avg~p~lI~~--~~vk~GavVIDVgi~r 234 (288)
T 1b0a_A 200 ------VENADLLIVAVGKPGFIPG--DWIKEGAIVIDVGINR 234 (288)
T ss_dssp ------HHHCSEEEECSCCTTCBCT--TTSCTTCEEEECCCEE
T ss_pred ------hccCCEEEECCCCcCcCCH--HHcCCCcEEEEccCCc
Confidence 2358999999987643322 4578999999998753
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0028 Score=55.46 Aligned_cols=73 Identities=22% Similarity=0.185 Sum_probs=54.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHhc------CCCcCEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQAG------KRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~------~~~~d~vi 253 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.++.... .|-.+.+..... ..++|+++
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv 108 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV 108 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence 6789999999 9999999999888999999999999988887776764322 243443332221 24689999
Q ss_pred EcC
Q 018158 254 DTV 256 (360)
Q Consensus 254 d~~ 256 (360)
++.
T Consensus 109 ~~a 111 (281)
T 3ppi_A 109 VAH 111 (281)
T ss_dssp ECC
T ss_pred Ecc
Confidence 883
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0073 Score=53.51 Aligned_cols=90 Identities=20% Similarity=0.187 Sum_probs=65.8
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHH
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGP 264 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~ 264 (360)
..+|.|+|.|.+|...+..+...|.+|++.++++++.+.+.+ .|...... ...+.-...|+||.|+.....+..
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~~~~-----~~~e~~~~aDvvi~~vp~~~~~~~ 80 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLA-EGACGAAA-----SAREFAGVVDALVILVVNAAQVRQ 80 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCSEEES-----SSTTTTTTCSEEEECCSSHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-cCCccccC-----CHHHHHhcCCEEEEECCCHHHHHH
Confidence 357999999999999999888899999999999999999888 77654111 111234578999999987544454
Q ss_pred HH-------HHhccCCEEEEeCC
Q 018158 265 IL-------ELLKVNGTLSVVGA 280 (360)
Q Consensus 265 ~~-------~~l~~~G~~v~~g~ 280 (360)
.+ ..++++..+++.+.
T Consensus 81 v~~~~~~l~~~l~~g~ivv~~st 103 (303)
T 3g0o_A 81 VLFGEDGVAHLMKPGSAVMVSST 103 (303)
T ss_dssp HHC--CCCGGGSCTTCEEEECSC
T ss_pred HHhChhhHHhhCCCCCEEEecCC
Confidence 43 34566666666654
|
| >2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0025 Score=57.35 Aligned_cols=89 Identities=18% Similarity=0.165 Sum_probs=68.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc---
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH--- 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~--- 260 (360)
.|+++.|+|.|.+|...++.++..|++|++.+++.++ ..+.+ +|.+. .+. .+.-...|+|+.++....
T Consensus 164 ~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~-~g~~~----~~l---~ell~~aDvV~l~~P~t~~t~ 234 (335)
T 2g76_A 164 NGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISP-EVSAS-FGVQQ----LPL---EEIWPLCDFITVHTPLLPSTT 234 (335)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCH-HHHHH-TTCEE----CCH---HHHGGGCSEEEECCCCCTTTT
T ss_pred CcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcch-hhhhh-cCcee----CCH---HHHHhcCCEEEEecCCCHHHH
Confidence 6889999999999999999999999999999987765 34555 77642 122 233457899999887542
Q ss_pred -cH-HHHHHHhccCCEEEEeCCC
Q 018158 261 -SL-GPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 261 -~~-~~~~~~l~~~G~~v~~g~~ 281 (360)
.+ ...+..|++++.+++++..
T Consensus 235 ~li~~~~l~~mk~gailIN~arg 257 (335)
T 2g76_A 235 GLLNDNTFAQCKKGVRVVNCARG 257 (335)
T ss_dssp TSBCHHHHTTSCTTEEEEECSCT
T ss_pred HhhCHHHHhhCCCCcEEEECCCc
Confidence 22 4678899999999999863
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0032 Score=56.46 Aligned_cols=98 Identities=10% Similarity=-0.054 Sum_probs=65.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc----CC--CeE--eeCccHHHHHhcCCCcCEEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL----GA--DEF--ILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g~--~~~--v~~~~~~~~~~~~~~~d~vid 254 (360)
++++|||+|+ |.+|..+++.+...|++|++++++.++.+.+.+.+ +. ..+ .|..+.+.+...-.++|+||.
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih 89 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAH 89 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEEE
Confidence 6789999999 99999999988888999999999987766554422 22 112 233343334444558999999
Q ss_pred cCCCcc--------------cHHHHHHHhc--c-CCEEEEeCCC
Q 018158 255 TVSAKH--------------SLGPILELLK--V-NGTLSVVGAP 281 (360)
Q Consensus 255 ~~g~~~--------------~~~~~~~~l~--~-~G~~v~~g~~ 281 (360)
+++... ....+++.+. . .++++.++..
T Consensus 90 ~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~ 133 (342)
T 1y1p_A 90 IASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSST 133 (342)
T ss_dssp CCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCG
T ss_pred eCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccH
Confidence 987431 1123444443 2 3688888653
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0085 Score=53.39 Aligned_cols=90 Identities=19% Similarity=0.217 Sum_probs=67.2
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHcCCC-eEeeCccHHHHHh-cCCCcCEEEEcCCCccc
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKELLGAD-EFILSTNAMQMQA-GKRTLDFILDTVSAKHS 261 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~-~~~~~d~vid~~g~~~~ 261 (360)
.+|.|+|.|.+|...++.++..|. +|++.++++++.+.+++ .|.. .... + ..+ .-.+.|+||.|+.....
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~-~G~~~~~~~--~---~~~~~~~~aDvVilavp~~~~ 107 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD-LGIIDEGTT--S---IAKVEDFSPDFVMLSSPVRTF 107 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH-TTSCSEEES--C---TTGGGGGCCSEEEECSCGGGH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-CCCcchhcC--C---HHHHhhccCCEEEEeCCHHHH
Confidence 679999999999999999999998 99999999999999888 8853 2221 1 112 24579999999986532
Q ss_pred ---HHHHHHHhccCCEEEEeCCC
Q 018158 262 ---LGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 262 ---~~~~~~~l~~~G~~v~~g~~ 281 (360)
+..+...++++..+++++..
T Consensus 108 ~~vl~~l~~~l~~~~iv~d~~Sv 130 (314)
T 3ggo_A 108 REIAKKLSYILSEDATVTDQGSV 130 (314)
T ss_dssp HHHHHHHHHHSCTTCEEEECCSC
T ss_pred HHHHHHHhhccCCCcEEEECCCC
Confidence 34455566777777777654
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0019 Score=56.14 Aligned_cols=75 Identities=13% Similarity=0.131 Sum_probs=52.4
Q ss_pred CCcEEEEEc---CChHHHHHHHHHHHcCCeEEEEeCChhH-HHHHHHHcCCC--e-EeeCccHHHHHhc-------CC--
Q 018158 184 AKKRIGIVG---LGGLGHVAVKFGKAFGHHVTVISTSPSK-EKEAKELLGAD--E-FILSTNAMQMQAG-------KR-- 247 (360)
Q Consensus 184 ~~~~vlI~G---ag~vG~~aiqla~~~G~~V~~~~~~~~~-~~~~~~~~g~~--~-~v~~~~~~~~~~~-------~~-- 247 (360)
.++++||+| +|++|.++++.+...|++|++++++.++ .+.+.+.++.. . ..|-.+.+..... ..
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~ 85 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG 85 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 578999998 4899999999998999999999998765 35554435532 1 1244444333221 12
Q ss_pred -CcCEEEEcCCC
Q 018158 248 -TLDFILDTVSA 258 (360)
Q Consensus 248 -~~d~vid~~g~ 258 (360)
++|++|++.|.
T Consensus 86 ~~iD~lv~nAg~ 97 (269)
T 2h7i_A 86 NKLDGVVHSIGF 97 (269)
T ss_dssp CCEEEEEECCCC
T ss_pred CCceEEEECCcc
Confidence 89999999874
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0026 Score=55.64 Aligned_cols=91 Identities=13% Similarity=0.084 Sum_probs=63.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS- 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~- 261 (360)
.+++++|+|+|++|.+++..+...|+ +|+++.|+.++.+.+.+.++ .+... .... - .+|+||+|++....
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~---~~~~~---~l~~-l-~~DivInaTp~Gm~~ 192 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFK---VISYD---ELSN-L-KGDVIINCTPKGMYP 192 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSE---EEEHH---HHTT-C-CCSEEEECSSTTSTT
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcC---cccHH---HHHh-c-cCCEEEECCccCccC
Confidence 58999999999999999999999999 89999999988766655332 22222 2222 2 79999999964210
Q ss_pred ----HHHHHHHhccCCEEEEeCCCC
Q 018158 262 ----LGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 262 ----~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.......++++..++++-..+
T Consensus 193 ~~~~~pi~~~~l~~~~~v~DlvY~P 217 (282)
T 3fbt_A 193 KEGESPVDKEVVAKFSSAVDLIYNP 217 (282)
T ss_dssp STTCCSSCHHHHTTCSEEEESCCSS
T ss_pred CCccCCCCHHHcCCCCEEEEEeeCC
Confidence 011345677777777775443
|
| >3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.021 Score=51.76 Aligned_cols=132 Identities=11% Similarity=0.107 Sum_probs=85.0
Q ss_pred cEEEEEcCChHHHHHHHHHHHc-CCeEE-EEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAF-GHHVT-VISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~-G~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
-++.|+|+|.+|...+..++.. +++++ +.++++++.+.+.+++|... +.+.+.+.. ...+|+|+.|+....+..
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~---~~~~~~~l~-~~~~D~V~i~tp~~~h~~ 81 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAG---DATMEALLA-REDVEMVIITVPNDKHAE 81 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCC---CSSHHHHHH-CSSCCEEEECSCTTSHHH
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCC---cCCHHHHhc-CCCCCEEEEeCChHHHHH
Confidence 4789999999999888877776 77855 66788888777766688643 333322221 457999999999887778
Q ss_pred HHHHHhccCCEEEEeCCCCCCcccChh------hH-hccC-cEEEEeecCCHHHHHHHHHHHhcCCCccc
Q 018158 264 PILELLKVNGTLSVVGAPEAPFELPSF------PL-IFGK-RSVKGSMTGGMRETQEMMNVCGKYNITCN 325 (360)
Q Consensus 264 ~~~~~l~~~G~~v~~g~~~~~~~~~~~------~~-~~~~-~~i~~~~~~~~~~~~~~~~~l~~~~l~~~ 325 (360)
.+..+++.|.++ .+-.+ +..+.. .+ -.++ .-..++.......++.+.+++.+|.+-.+
T Consensus 82 ~~~~al~~gk~v-l~EKP---~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p~~~~~k~~i~~g~iG~i 147 (354)
T 3db2_A 82 VIEQCARSGKHI-YVEKP---ISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALRKMKEMIDTKEIGEV 147 (354)
T ss_dssp HHHHHHHTTCEE-EEESS---SCSSHHHHHHHHHHHHHHCCCEEEECGGGGSHHHHHHHHHHHTTTTCCE
T ss_pred HHHHHHHcCCEE-EEccC---CCCCHHHHHHHHHHHHHcCCeEEEeechhcCHHHHHHHHHHhcCCCCCe
Confidence 888888887554 44322 222211 11 1122 33344444444567788888888887443
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0027 Score=54.54 Aligned_cols=73 Identities=16% Similarity=0.257 Sum_probs=53.7
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHhc-------CCCcCEEEE
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQAG-------KRTLDFILD 254 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~d~vid 254 (360)
+++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.++.... .|-.+.+..... ..++|++|+
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn 80 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN 80 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 46899999 9999999999988999999999999888777665653221 244444333222 247999999
Q ss_pred cCCC
Q 018158 255 TVSA 258 (360)
Q Consensus 255 ~~g~ 258 (360)
+.|.
T Consensus 81 nAg~ 84 (248)
T 3asu_A 81 NAGL 84 (248)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 9874
|
| >4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.026 Score=50.53 Aligned_cols=130 Identities=14% Similarity=0.137 Sum_probs=82.8
Q ss_pred cEEEEEcCChHHHHHHHHHHHc-CCeEE-EEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAF-GHHVT-VISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~-G~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
-++.|+|+|.+|...+..++.. +++++ +.++++++.+.+.+++|.. +.+.+.+.. ...+|+|+.|+....+..
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~----~~~~~~~l~-~~~~D~V~i~tp~~~h~~ 78 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE----VRTIDAIEA-AADIDAVVICTPTDTHAD 78 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE----ECCHHHHHH-CTTCCEEEECSCGGGHHH
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC----cCCHHHHhc-CCCCCEEEEeCCchhHHH
Confidence 3688999999999877777665 77766 6778888877777768764 233322211 347999999999887778
Q ss_pred HHHHHhccCCEEEEeCCCCCCcccChh------hH-hccCcEE-EEeecCCHHHHHHHHHHHhcCCCcc
Q 018158 264 PILELLKVNGTLSVVGAPEAPFELPSF------PL-IFGKRSV-KGSMTGGMRETQEMMNVCGKYNITC 324 (360)
Q Consensus 264 ~~~~~l~~~G~~v~~g~~~~~~~~~~~------~~-~~~~~~i-~~~~~~~~~~~~~~~~~l~~~~l~~ 324 (360)
.+..+++.|.+ +.+..+ +..+.. .. -.+++.+ .++.......++.+.+++.+|.+-.
T Consensus 79 ~~~~al~~gk~-v~~EKP---~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~ 143 (331)
T 4hkt_A 79 LIERFARAGKA-IFCEKP---IDLDAERVRACLKVVSDTKAKLMVGFNRRFDPHFMAVRKAIDDGRIGE 143 (331)
T ss_dssp HHHHHHHTTCE-EEECSC---SCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHTTTTCS
T ss_pred HHHHHHHcCCc-EEEecC---CCCCHHHHHHHHHHHHHcCCeEEEcccccCCHHHHHHHHHHHcCCCCc
Confidence 88888887754 445332 222221 11 1223333 3333333355778888888887744
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0044 Score=54.71 Aligned_cols=75 Identities=16% Similarity=0.163 Sum_probs=53.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc----CCCeE---eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL----GADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|..++..+...|++|++++++.++.+.+.+.+ +.... .|-.+.+..... ..+
T Consensus 25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 104 (302)
T 1w6u_A 25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH 104 (302)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999 99999999999999999999999988766554433 43221 243443332221 357
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|+++|.
T Consensus 105 id~li~~Ag~ 114 (302)
T 1w6u_A 105 PNIVINNAAG 114 (302)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999999983
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0023 Score=53.79 Aligned_cols=91 Identities=18% Similarity=0.253 Sum_probs=62.7
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhcCCCcCEEEEcCCCc-----
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAGKRTLDFILDTVSAK----- 259 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g~~----- 259 (360)
+|||+|+ |.+|..+++.+...|.+|++++|++++...+.. -+.+.+ .|..+.+. ..-.++|+||+++|..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~ 78 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLG-ATVATLVKEPLVLTE--ADLDSVDAVVDALSVPWGSGR 78 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTC-TTSEEEECCGGGCCH--HHHTTCSEEEECCCCCTTSSC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccC-CCceEEecccccccH--hhcccCCEEEECCccCCCcch
Confidence 5899999 999999999999999999999999887665433 233222 13333222 3346899999999862
Q ss_pred -----ccHHHHHHHhcc-CCEEEEeCC
Q 018158 260 -----HSLGPILELLKV-NGTLSVVGA 280 (360)
Q Consensus 260 -----~~~~~~~~~l~~-~G~~v~~g~ 280 (360)
.....+++.++. +++++.++.
T Consensus 79 ~~~n~~~~~~l~~a~~~~~~~~v~~SS 105 (224)
T 3h2s_A 79 GYLHLDFATHLVSLLRNSDTLAVFILG 105 (224)
T ss_dssp THHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred hhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 112445555553 478888864
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0046 Score=53.91 Aligned_cols=74 Identities=18% Similarity=0.262 Sum_probs=51.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.++++||+|+ |++|..++..+...|++|++++++.++.+.+.+. .+.... .|-.+.+..... ..++
T Consensus 33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 112 (279)
T 3ctm_A 33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTI 112 (279)
T ss_dssp TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999 9999999888888899999999887655444331 343211 243443332221 2469
Q ss_pred CEEEEcCC
Q 018158 250 DFILDTVS 257 (360)
Q Consensus 250 d~vid~~g 257 (360)
|++|+++|
T Consensus 113 d~li~~Ag 120 (279)
T 3ctm_A 113 DVFVANAG 120 (279)
T ss_dssp SEEEECGG
T ss_pred CEEEECCc
Confidence 99999887
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0014 Score=55.25 Aligned_cols=85 Identities=15% Similarity=0.107 Sum_probs=58.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhc---CCCcCEEEEcCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAG---KRTLDFILDTVSAK 259 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~---~~~~d~vid~~g~~ 259 (360)
.++++||+|+ +++|.++++.+...|++|++++++.+ .|-.+.+..... -.++|+++++.|..
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~g~id~lv~nAg~~ 70 (223)
T 3uce_A 5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFETIGAFDHLIVTAGSY 70 (223)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence 5789999999 99999999999889999999997754 122222222111 25789999888742
Q ss_pred c--------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 260 H--------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 260 ~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
. ..+.+...++++|+++.++...
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~ 119 (223)
T 3uce_A 71 APAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGML 119 (223)
T ss_dssp CCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGG
T ss_pred CCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchh
Confidence 0 1233344556678999997643
|
| >1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0045 Score=54.22 Aligned_cols=94 Identities=14% Similarity=0.112 Sum_probs=66.6
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC-eE-eeCccHHHHHhcCCCcCEEEEcC
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD-EF-ILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~~-v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
++++.+||-+|+|. |..+..+++..|++|++++.+++..+.+++++ |.. .+ +...+.. .....+|+|+...
T Consensus 62 ~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~---~~~~~fD~v~~~~ 137 (287)
T 1kpg_A 62 LQPGMTLLDVGCGW-GATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWE---QFDEPVDRIVSIG 137 (287)
T ss_dssp CCTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGG---GCCCCCSEEEEES
T ss_pred CCCcCEEEEECCcc-cHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChh---hCCCCeeEEEEeC
Confidence 44899999999975 77888888878999999999999888887753 321 11 1111211 2236799998652
Q ss_pred -----CC---cccHHHHHHHhccCCEEEEeC
Q 018158 257 -----SA---KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 257 -----g~---~~~~~~~~~~l~~~G~~v~~g 279 (360)
+. ...+..+.+.|+++|+++...
T Consensus 138 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 138 AFEHFGHERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp CGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred chhhcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 21 234788899999999998654
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0027 Score=54.18 Aligned_cols=73 Identities=18% Similarity=0.075 Sum_probs=53.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHcCCCe-EeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAF--GHHVTVISTSPSKEKEAKELLGADE-FILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~--G~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
.++++||+|+ |.+|..+++.+... |++|+++++++++.+.+ . -+... ..|..+.+.+...-.++|++|+++|.
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~-~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~ 79 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-G-GEADVFIGDITDADSINPAFQGIDALVILTSA 79 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-T-CCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-C-CCeeEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence 5688999999 99999999988888 78999999998765433 1 12222 23555555555555689999999874
|
| >1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0039 Score=52.70 Aligned_cols=95 Identities=17% Similarity=0.145 Sum_probs=67.6
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC---CeEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA---DEFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~---~~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
.+++++||-+|+|. |..+..+++. +.+|++++.+++..+.+++++.. ..++..+-.... .....+|+|+.....
T Consensus 68 ~~~~~~vLdiG~G~-G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~~~ 144 (231)
T 1vbf_A 68 LHKGQKVLEIGTGI-GYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGY-EEEKPYDRVVVWATA 144 (231)
T ss_dssp CCTTCEEEEECCTT-SHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCC-GGGCCEEEEEESSBB
T ss_pred CCCCCEEEEEcCCC-CHHHHHHHHH-cCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCccccc-ccCCCccEEEECCcH
Confidence 34899999999975 8888888876 48999999999999988886532 122222211111 124579999977655
Q ss_pred cccHHHHHHHhccCCEEEEeC
Q 018158 259 KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 259 ~~~~~~~~~~l~~~G~~v~~g 279 (360)
......+.+.|+++|+++..-
T Consensus 145 ~~~~~~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 145 PTLLCKPYEQLKEGGIMILPI 165 (231)
T ss_dssp SSCCHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEE
Confidence 545578899999999988764
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.01 Score=51.96 Aligned_cols=75 Identities=17% Similarity=0.178 Sum_probs=51.4
Q ss_pred CCcEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCChh---HHHHHHHHcCCCeE--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL---GGLGHVAVKFGKAFGHHVTVISTSPS---KEKEAKELLGADEF--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga---g~vG~~aiqla~~~G~~V~~~~~~~~---~~~~~~~~~g~~~~--v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|.++++.+...|++|++++++.+ ..+.+.+..|.... .|-.+.+..... ..+
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 99 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGS 99 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999987 59999999988889999999999875 33444332442222 244444333221 357
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|++.|.
T Consensus 100 iD~lv~~Ag~ 109 (285)
T 2p91_A 100 LDIIVHSIAY 109 (285)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999974
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0021 Score=56.25 Aligned_cols=94 Identities=12% Similarity=0.119 Sum_probs=65.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhcCCCcCEEEEcCCCc---
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAF--GHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAGKRTLDFILDTVSAK--- 259 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~--G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g~~--- 259 (360)
++||+|+ |.+|..+++.+... |.+|+++++++++...+.. .+...+ .|..+.+.+...-.++|+||.+++..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~ 80 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD-QGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYDN 80 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH-TTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCSCH
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh-cCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCcCc
Confidence 5899999 99999999888887 8999999998877665544 444322 35555555555567899999998742
Q ss_pred ----ccHHHHHHHhccC--CEEEEeCCC
Q 018158 260 ----HSLGPILELLKVN--GTLSVVGAP 281 (360)
Q Consensus 260 ----~~~~~~~~~l~~~--G~~v~~g~~ 281 (360)
.....+++.++.. ++++.++..
T Consensus 81 ~~n~~~~~~l~~a~~~~~~~~~v~~Ss~ 108 (287)
T 2jl1_A 81 TLLIVQHANVVKAARDAGVKHIAYTGYA 108 (287)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred hHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 1123444555543 488877653
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.012 Score=53.07 Aligned_cols=75 Identities=16% Similarity=0.115 Sum_probs=53.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChh----HHHHHHHHc-----CCCeE--eeCccHHHHHhcCCCcCE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPS----KEKEAKELL-----GADEF--ILSTNAMQMQAGKRTLDF 251 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~----~~~~~~~~~-----g~~~~--v~~~~~~~~~~~~~~~d~ 251 (360)
.+++|||+|+ |.+|..+++.+...|.+|++++++.. ....+...+ +.-.+ .|..+.+.+...-.++|+
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 103 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDH 103 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCE
Confidence 4689999999 99999999999999999999998543 333333311 21122 244555555555669999
Q ss_pred EEEcCCC
Q 018158 252 ILDTVSA 258 (360)
Q Consensus 252 vid~~g~ 258 (360)
||.+++.
T Consensus 104 Vih~A~~ 110 (351)
T 3ruf_A 104 VLHQAAL 110 (351)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 9999984
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0029 Score=55.15 Aligned_cols=75 Identities=16% Similarity=0.011 Sum_probs=52.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHc----CCCeE---eeCccH----HHHHhc-----
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIST-SPSKEKEAKELL----GADEF---ILSTNA----MQMQAG----- 245 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~-~~~~~~~~~~~~----g~~~~---v~~~~~----~~~~~~----- 245 (360)
.++++||+|+ |++|.++++.+...|++|+++++ +.++.+.+.+.+ |.... .|-.+. +.....
T Consensus 10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 89 (276)
T 1mxh_A 10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF 89 (276)
T ss_dssp -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence 4688999999 99999999999899999999999 887766554433 53211 233333 222221
Q ss_pred --CCCcCEEEEcCCC
Q 018158 246 --KRTLDFILDTVSA 258 (360)
Q Consensus 246 --~~~~d~vid~~g~ 258 (360)
..++|++|+++|.
T Consensus 90 ~~~g~id~lv~nAg~ 104 (276)
T 1mxh_A 90 RAFGRCDVLVNNASA 104 (276)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HhcCCCCEEEECCCC
Confidence 3479999999983
|
| >2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0015 Score=59.52 Aligned_cols=90 Identities=14% Similarity=0.158 Sum_probs=67.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCc---
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAK--- 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~--- 259 (360)
.|+++.|+|.|.+|...++.++.+|++ |++.+++..+.+.+.+ +|...+ .+. .+.-...|+|+.++...
T Consensus 163 ~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~-~g~~~~---~~l---~ell~~aDvV~l~~P~t~~t 235 (364)
T 2j6i_A 163 EGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEK-VGARRV---ENI---EELVAQADIVTVNAPLHAGT 235 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHH-TTEEEC---SSH---HHHHHTCSEEEECCCCSTTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHh-cCcEec---CCH---HHHHhcCCEEEECCCCChHH
Confidence 689999999999999999999999997 9999988766666666 774321 122 22234789999988753
Q ss_pred -ccH-HHHHHHhccCCEEEEeCC
Q 018158 260 -HSL-GPILELLKVNGTLSVVGA 280 (360)
Q Consensus 260 -~~~-~~~~~~l~~~G~~v~~g~ 280 (360)
..+ ...+..|++++.+++++.
T Consensus 236 ~~li~~~~l~~mk~ga~lIn~ar 258 (364)
T 2j6i_A 236 KGLINKELLSKFKKGAWLVNTAR 258 (364)
T ss_dssp TTCBCHHHHTTSCTTEEEEECSC
T ss_pred HHHhCHHHHhhCCCCCEEEECCC
Confidence 122 467788999988888874
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0053 Score=52.27 Aligned_cols=71 Identities=18% Similarity=0.261 Sum_probs=49.1
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCcc--HHH-HH---hcCCCcCEEEEcC
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTN--AMQ-MQ---AGKRTLDFILDTV 256 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~--~~~-~~---~~~~~~d~vid~~ 256 (360)
++++||+|+ |++|.++++.+...|++|++++++.++ ..++ +|...+ .|-.+ ... .. +.-.++|+++++.
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~g~id~lv~~A 78 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE--AAQS-LGAVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAA 78 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH--HHHH-HTCEEEECCTTTSCHHHHHHHHHHHHTSCCEEEECC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHh-hCcEEEecCCchHHHHHHHHHHHHHcCCCCEEEECC
Confidence 578999999 999999999999999999999998776 2333 553211 12222 111 11 1135799999998
Q ss_pred CC
Q 018158 257 SA 258 (360)
Q Consensus 257 g~ 258 (360)
|.
T Consensus 79 g~ 80 (239)
T 2ekp_A 79 AV 80 (239)
T ss_dssp CC
T ss_pred CC
Confidence 74
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0051 Score=52.67 Aligned_cols=75 Identities=23% Similarity=0.229 Sum_probs=51.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIST-SPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~-~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|.++++.+...|++|+++++ +.++.+.+.+. .|.+.. .|-.+.+..... ..+
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 82 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS 82 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4688999999 99999999999999999998876 44554444332 343322 233443332221 348
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|+++++.|.
T Consensus 83 id~lv~nAg~ 92 (246)
T 3osu_A 83 LDVLVNNAGI 92 (246)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0025 Score=54.51 Aligned_cols=73 Identities=11% Similarity=0.001 Sum_probs=52.8
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEE-e--CChhHHHHHHHHc-CCCeEeeCccHHHH----HhcCCCcCEEEEc
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVI-S--TSPSKEKEAKELL-GADEFILSTNAMQM----QAGKRTLDFILDT 255 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~-~--~~~~~~~~~~~~~-g~~~~v~~~~~~~~----~~~~~~~d~vid~ 255 (360)
++++||+|+ |++|.++++.+...|++|+++ + ++.++.+.+.+.+ +. .+.+..+.... .....++|++|++
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~g~iD~lv~~ 79 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT-IALAEQKPERLVDATLQHGEAIDTIVSN 79 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTE-EECCCCCGGGHHHHHGGGSSCEEEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCC-cccCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 468999999 999999999999999999999 6 9988887776645 32 23343333221 1223579999999
Q ss_pred CCC
Q 018158 256 VSA 258 (360)
Q Consensus 256 ~g~ 258 (360)
.|.
T Consensus 80 Ag~ 82 (244)
T 1zmo_A 80 DYI 82 (244)
T ss_dssp CCC
T ss_pred CCc
Confidence 873
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0042 Score=53.59 Aligned_cols=74 Identities=15% Similarity=0.199 Sum_probs=51.8
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhH--HHHHHHHc---CCCeE---eeCccHHHHHhc-------CCC
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSK--EKEAKELL---GADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~--~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
++++||+|+ |++|.++++.+...|++|++++++.++ .+.+.+.+ +.... .|-.+.+..... -.+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG 81 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 578999999 999999998888889999999998776 55443323 33211 244443332221 247
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|++.|.
T Consensus 82 iD~lv~nAg~ 91 (258)
T 3a28_C 82 FDVLVNNAGI 91 (258)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0046 Score=53.47 Aligned_cols=75 Identities=17% Similarity=0.191 Sum_probs=53.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc--------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG--------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~--------~~~ 248 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +.... .|-.+.+..... +.+
T Consensus 13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 92 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK 92 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999 99999999999999999999999988766554322 43211 233333332222 268
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|+++|.
T Consensus 93 id~li~~Ag~ 102 (266)
T 1xq1_A 93 LDILINNLGA 102 (266)
T ss_dssp CSEEEEECCC
T ss_pred CcEEEECCCC
Confidence 9999999884
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0045 Score=53.60 Aligned_cols=93 Identities=15% Similarity=0.085 Sum_probs=62.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC--eEeeCccHHHHH-------hcCCCcCEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD--EFILSTNAMQMQ-------AGKRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~~~~-------~~~~~~d~vi 253 (360)
.|+++||+|+ +++|.+.++.+...|++|++++++.++ . .... ...|-.+.+... +.-.++|+++
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~-----~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilV 83 (261)
T 4h15_A 10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE-----G-LPEELFVEADLTTKEGCAIVAEATRQRLGGVDVIV 83 (261)
T ss_dssp TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT-----T-SCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEE
T ss_pred CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh-----C-CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 6899999999 999999999999999999999987542 1 2211 112333332221 1246799999
Q ss_pred EcCCCc---------------------------ccHHHHHHHhc--cCCEEEEeCCCC
Q 018158 254 DTVSAK---------------------------HSLGPILELLK--VNGTLSVVGAPE 282 (360)
Q Consensus 254 d~~g~~---------------------------~~~~~~~~~l~--~~G~~v~~g~~~ 282 (360)
++.|.. ...+.++..|+ .+|+++.++...
T Consensus 84 nnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~ 141 (261)
T 4h15_A 84 HMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQ 141 (261)
T ss_dssp ECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred ECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehh
Confidence 988731 01244555554 368999998654
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0029 Score=58.66 Aligned_cols=95 Identities=17% Similarity=0.148 Sum_probs=66.8
Q ss_pred cEEEEEcCChHHHHHHHHHHHcC---CeEEEEeCChhHHHHHHHHcCC-----Ce--EeeCccHHHHHhcCC--CcCEEE
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFG---HHVTVISTSPSKEKEAKELLGA-----DE--FILSTNAMQMQAGKR--TLDFIL 253 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G---~~V~~~~~~~~~~~~~~~~~g~-----~~--~v~~~~~~~~~~~~~--~~d~vi 253 (360)
.+|+|+|+|.+|..+++.+...| .+|++.+++.++.+.+.+.++. -. .+|..+.+.....-. ++|+||
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVi 81 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVL 81 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEE
Confidence 36899999999999999888877 3899999999988777665531 11 234444434433322 589999
Q ss_pred EcCCCcccHHHHHHHhccCCEEEEeCC
Q 018158 254 DTVSAKHSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 254 d~~g~~~~~~~~~~~l~~~G~~v~~g~ 280 (360)
++++.......+..+++.+-.++++..
T Consensus 82 n~ag~~~~~~v~~a~l~~g~~vvD~a~ 108 (405)
T 4ina_A 82 NIALPYQDLTIMEACLRTGVPYLDTAN 108 (405)
T ss_dssp ECSCGGGHHHHHHHHHHHTCCEEESSC
T ss_pred ECCCcccChHHHHHHHHhCCCEEEecC
Confidence 999865444556667777777776644
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.84 E-value=0.006 Score=52.10 Aligned_cols=75 Identities=23% Similarity=0.269 Sum_probs=53.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---C-C-CeEe--eC--ccHHHHHh-------cC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---G-A-DEFI--LS--TNAMQMQA-------GK 246 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g-~-~~~v--~~--~~~~~~~~-------~~ 246 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.+ + . ..++ +. .+.+.... ..
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~ 92 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEF 92 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhC
Confidence 6889999999 99999999999999999999999998876665433 3 1 1222 22 33222221 13
Q ss_pred CCcCEEEEcCCC
Q 018158 247 RTLDFILDTVSA 258 (360)
Q Consensus 247 ~~~d~vid~~g~ 258 (360)
.++|++|++.|.
T Consensus 93 g~id~lv~nAg~ 104 (247)
T 3i1j_A 93 GRLDGLLHNASI 104 (247)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 489999999884
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0027 Score=54.56 Aligned_cols=75 Identities=20% Similarity=0.282 Sum_probs=52.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHc---CCCe-E--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTS-PSKEKEAKELL---GADE-F--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~-~~~~~~~~~~~---g~~~-~--v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|..+++.+...|++|++++++ .++.+.+.+.+ +... . .|..+.+..... ..+
T Consensus 6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (258)
T 3afn_B 6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG 85 (258)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5788999999 999999999888899999999998 66655443322 4221 1 244444333222 247
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|+++|.
T Consensus 86 id~vi~~Ag~ 95 (258)
T 3afn_B 86 IDVLINNAGG 95 (258)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.003 Score=55.13 Aligned_cols=94 Identities=15% Similarity=0.172 Sum_probs=64.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhcCCCcCEEEEcCCCc---
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAF--GHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAGKRTLDFILDTVSAK--- 259 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~--G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g~~--- 259 (360)
++||+|+ |.+|..+++.+... |.+|+++++++++.+.+.. .+...+ .|..+.+.+...-.++|+||.+++..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~ 79 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA-QGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQ 79 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH-TTCEEEECCTTCHHHHHHHTTTCSEEEECC------
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc-CCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCchH
Confidence 4799999 99999999888887 8999999998876655544 444322 35555555555667899999998742
Q ss_pred --ccHHHHHHHhccC--CEEEEeCCC
Q 018158 260 --HSLGPILELLKVN--GTLSVVGAP 281 (360)
Q Consensus 260 --~~~~~~~~~l~~~--G~~v~~g~~ 281 (360)
.....+++.++.. ++++.++..
T Consensus 80 ~~~~~~~l~~a~~~~~~~~~v~~Ss~ 105 (286)
T 2zcu_A 80 RAPQHRNVINAAKAAGVKFIAYTSLL 105 (286)
T ss_dssp --CHHHHHHHHHHHHTCCEEEEEEET
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 1234555555432 578877653
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0025 Score=54.65 Aligned_cols=74 Identities=19% Similarity=0.151 Sum_probs=53.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe--EeeCccHHHHHhc---CCCcCEEEEcCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE--FILSTNAMQMQAG---KRTLDFILDTVS 257 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~--~v~~~~~~~~~~~---~~~~d~vid~~g 257 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+ ++... ..|-.+.+..... ..++|++|++.|
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag 83 (246)
T 2ag5_A 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-YPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG 83 (246)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-STTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-ccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCc
Confidence 5789999999 999999999999999999999999877665542 43111 1244444333322 457999999998
Q ss_pred C
Q 018158 258 A 258 (360)
Q Consensus 258 ~ 258 (360)
.
T Consensus 84 ~ 84 (246)
T 2ag5_A 84 F 84 (246)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0042 Score=53.54 Aligned_cols=93 Identities=17% Similarity=0.100 Sum_probs=62.1
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC--------------------CeE-eeCccHHHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA--------------------DEF-ILSTNAMQM 242 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~--------------------~~~-v~~~~~~~~ 242 (360)
++.+||.+|+|. |..+..|++. |++|++++.++.-.+.++++.+. ..+ +...+....
T Consensus 68 ~~~~vLD~GCG~-G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 68 SGLRVFFPLCGK-AIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CSCEEEETTCTT-CTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCeEEEeCCCC-cHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 788999999964 7777777765 99999999999999988765532 011 111111111
Q ss_pred Hhc-CCCcCEEEEcCCC--------cccHHHHHHHhccCCEEEEe
Q 018158 243 QAG-KRTLDFILDTVSA--------KHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 243 ~~~-~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~ 278 (360)
... ...||+|++...- ...+..+.+.|++||+++.+
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 111 2679999975431 12356788999999998644
|
| >3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.025 Score=51.20 Aligned_cols=131 Identities=14% Similarity=0.081 Sum_probs=81.7
Q ss_pred cEEEEEcCChHHH-HHHHHHHHc-CCeEE-EEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 186 KRIGIVGLGGLGH-VAVKFGKAF-GHHVT-VISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 186 ~~vlI~Gag~vG~-~aiqla~~~-G~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
-++.|+|+|.+|. ..+..++.. +++++ +.++++++.+.+.+++|.... .+.+.+. ....+|+|+.|+......
T Consensus 28 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~---~~~~~ll-~~~~~D~V~i~tp~~~h~ 103 (350)
T 3rc1_A 28 IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPV---EGYPALL-ERDDVDAVYVPLPAVLHA 103 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEE---ESHHHHH-TCTTCSEEEECCCGGGHH
T ss_pred eEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCc---CCHHHHh-cCCCCCEEEECCCcHHHH
Confidence 4689999999998 566666655 77865 567788887777766886543 2222221 135799999999988777
Q ss_pred HHHHHHhccCCEEEEeCCCCCCcccChh------hH-hccCcE-EEEeecCCHHHHHHHHHHHhcCCCcc
Q 018158 263 GPILELLKVNGTLSVVGAPEAPFELPSF------PL-IFGKRS-VKGSMTGGMRETQEMMNVCGKYNITC 324 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~------~~-~~~~~~-i~~~~~~~~~~~~~~~~~l~~~~l~~ 324 (360)
..+..+++.|.. |.+-.+ +..+.. .+ -.+++. ..+........++.+.+++.+|.+-.
T Consensus 104 ~~~~~al~aGk~-Vl~EKP---~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG~ 169 (350)
T 3rc1_A 104 EWIDRALRAGKH-VLAEKP---LTTDRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADMLDEGVIGE 169 (350)
T ss_dssp HHHHHHHHTTCE-EEEESS---SCSSHHHHHHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHHHTTTTCS
T ss_pred HHHHHHHHCCCc-EEEeCC---CCCCHHHHHHHHHHHHHhCCEEEEEecccCCHHHHHHHHHHhcCCCCC
Confidence 888888887755 444332 222221 11 122333 33333333345777778888877743
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0044 Score=53.65 Aligned_cols=75 Identities=21% Similarity=0.182 Sum_probs=50.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcC---CeEEEEeCChhHHHHHHHH--cCCCe-E--eeCccHHHHHhc--------C
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFG---HHVTVISTSPSKEKEAKEL--LGADE-F--ILSTNAMQMQAG--------K 246 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G---~~V~~~~~~~~~~~~~~~~--~g~~~-~--v~~~~~~~~~~~--------~ 246 (360)
.++++||+|+ |++|..+++.+...| ++|++++++.++.+.+.+. .+... . .|-.+.+..... +
T Consensus 20 ~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 99 (267)
T 1sny_A 20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK 99 (267)
T ss_dssp CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred CCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhcC
Confidence 6789999999 999999999998889 8999999987654433331 13221 1 233333222221 2
Q ss_pred C-CcCEEEEcCCC
Q 018158 247 R-TLDFILDTVSA 258 (360)
Q Consensus 247 ~-~~d~vid~~g~ 258 (360)
. ++|++|+++|.
T Consensus 100 ~~~id~li~~Ag~ 112 (267)
T 1sny_A 100 DQGLNVLFNNAGI 112 (267)
T ss_dssp GGCCSEEEECCCC
T ss_pred CCCccEEEECCCc
Confidence 1 79999999984
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.00024 Score=63.12 Aligned_cols=118 Identities=10% Similarity=0.032 Sum_probs=76.8
Q ss_pred ccccchhhhhhchhhcc---------CCCCCCCCcEEEEEcCC-hHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC
Q 018158 161 APLLCAGITVFCPMKDN---------NLIDSPAKKRIGIVGLG-GLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA 230 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~---------~~~~~~~~~~vlI~Gag-~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~ 230 (360)
..+||+...+...+++. +.-- .|++++|+|+| .+|..+++++...|++|+++.++..+.......++.
T Consensus 146 ~~~PcTp~a~v~ll~~~~~~~~~~~~g~~l--~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~ 223 (320)
T 1edz_A 146 SILPCTPLAIVKILEFLKIYNNLLPEGNRL--YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKL 223 (320)
T ss_dssp CCCCHHHHHHHHHHHHTTCSCTTSCTTCTT--TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSC
T ss_pred CcCCCcHHHHHHHHHhhcccccccccCCCC--CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhh
Confidence 56778877777777763 3122 68999999997 579999999999999999998874332111111332
Q ss_pred C-e-EeeC--ccHHHHHhcCCCcCEEEEcCCCccc-HHHHHHHhccCCEEEEeCCCC
Q 018158 231 D-E-FILS--TNAMQMQAGKRTLDFILDTVSAKHS-LGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 231 ~-~-~v~~--~~~~~~~~~~~~~d~vid~~g~~~~-~~~~~~~l~~~G~~v~~g~~~ 282 (360)
. + .... .+.....+.-+.+|+||.++|.... +.. ++++++..++++|...
T Consensus 224 ~~~~~t~~~~t~~~~L~e~l~~ADIVIsAtg~p~~vI~~--e~vk~GavVIDVgi~r 278 (320)
T 1edz_A 224 NKHHVEDLGEYSEDLLKKCSLDSDVVITGVPSENYKFPT--EYIKEGAVCINFACTK 278 (320)
T ss_dssp CCCEEEEEEECCHHHHHHHHHHCSEEEECCCCTTCCBCT--TTSCTTEEEEECSSSC
T ss_pred hcccccccccccHhHHHHHhccCCEEEECCCCCcceeCH--HHcCCCeEEEEcCCCc
Confidence 1 1 1000 1112344445679999999997643 322 4478888888998764
|
| >2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.82 E-value=0.011 Score=51.61 Aligned_cols=90 Identities=19% Similarity=0.200 Sum_probs=64.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCC-CcCEEEEcCCCccc--
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKR-TLDFILDTVSAKHS-- 261 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~-~~d~vid~~g~~~~-- 261 (360)
+|.|+|+|.+|.+.++.++..|. +|+++++++++.+.+++ +|...... .+. .+.-. +.|+||.|+.....
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~-~g~~~~~~-~~~---~~~~~~~aDvVilavp~~~~~~ 77 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD-LGIIDEGT-TSI---AKVEDFSPDFVMLSSPVRTFRE 77 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH-TTSCSEEE-SCG---GGGGGTCCSEEEECSCHHHHHH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH-CCCccccc-CCH---HHHhcCCCCEEEEcCCHHHHHH
Confidence 68899999999999999998898 89999999999888877 78532111 111 12234 79999999976532
Q ss_pred -HHHHHHHhccCCEEEEeCCC
Q 018158 262 -LGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 262 -~~~~~~~l~~~G~~v~~g~~ 281 (360)
+..+...++++..+++++..
T Consensus 78 v~~~l~~~l~~~~iv~~~~~~ 98 (281)
T 2g5c_A 78 IAKKLSYILSEDATVTDQGSV 98 (281)
T ss_dssp HHHHHHHHSCTTCEEEECCSC
T ss_pred HHHHHHhhCCCCcEEEECCCC
Confidence 23344456777777766543
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0071 Score=50.72 Aligned_cols=75 Identities=11% Similarity=-0.004 Sum_probs=58.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe-eCccHHHHHhc-CCCcCEEEEcCCCccc
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI-LSTNAMQMQAG-KRTLDFILDTVSAKHS 261 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~-~~~~d~vid~~g~~~~ 261 (360)
+++|+|+|.+|..+++.+...|.+|+++++++++.+.+.+.+|...+. |..+.+..... -.++|+++-+++....
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~ 78 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEV 78 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHH
Confidence 488999999999999999999999999999999988876646653222 44444444444 4789999999987643
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0085 Score=51.91 Aligned_cols=93 Identities=14% Similarity=0.124 Sum_probs=61.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe-EeeCccHHHHHhc-------CCCcCEEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE-FILSTNAMQMQAG-------KRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~-------~~~~d~vid 254 (360)
.++++||+|+ |++|..+++.+...|++|+++++++++ . -.... ..|-.+.+..... ..++|++|+
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~ 80 (264)
T 2dtx_A 7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----E-AKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN 80 (264)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----S-CSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----C-CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5789999999 999999999999999999999987654 1 11111 1244443333221 247999999
Q ss_pred cCCCcc-------------------------cHHHHHHHhcc--CCEEEEeCCCC
Q 018158 255 TVSAKH-------------------------SLGPILELLKV--NGTLSVVGAPE 282 (360)
Q Consensus 255 ~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~ 282 (360)
++|... ..+.++..|+. .|+++.++...
T Consensus 81 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~ 135 (264)
T 2dtx_A 81 NAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQ 135 (264)
T ss_dssp CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGG
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCch
Confidence 998421 02344455543 58999997643
|
| >4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0089 Score=54.23 Aligned_cols=87 Identities=18% Similarity=0.288 Sum_probs=65.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc---
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH--- 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~--- 260 (360)
.|+++.|+|.|.+|...++.++.+|++|++.+++.. .+.+.+ .|... .+ ..+.-...|+|+.++....
T Consensus 175 ~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~-~~~~~~-~g~~~----~~---l~ell~~aDvV~l~~Plt~~T~ 245 (365)
T 4hy3_A 175 AGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLP-RSMLEE-NGVEP----AS---LEDVLTKSDFIFVVAAVTSENK 245 (365)
T ss_dssp SSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSC-HHHHHH-TTCEE----CC---HHHHHHSCSEEEECSCSSCC--
T ss_pred CCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCCC-HHHHhh-cCeee----CC---HHHHHhcCCEEEEcCcCCHHHH
Confidence 489999999999999999999999999999998753 344445 66531 12 2233457899998876331
Q ss_pred --cHHHHHHHhccCCEEEEeC
Q 018158 261 --SLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 261 --~~~~~~~~l~~~G~~v~~g 279 (360)
.-...+..|++++.+++++
T Consensus 246 ~li~~~~l~~mk~gailIN~a 266 (365)
T 4hy3_A 246 RFLGAEAFSSMRRGAAFILLS 266 (365)
T ss_dssp -CCCHHHHHTSCTTCEEEECS
T ss_pred hhcCHHHHhcCCCCcEEEECc
Confidence 1257788999999999997
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0033 Score=55.00 Aligned_cols=75 Identities=19% Similarity=0.262 Sum_probs=53.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CC---Ce-E--eeCccHHHHHhc-------C
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GA---DE-F--ILSTNAMQMQAG-------K 246 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~---~~-~--v~~~~~~~~~~~-------~ 246 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ +. .. . .|-.+.+..... .
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 84 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 5789999999 99999999999889999999999988776654433 22 11 1 244444333221 2
Q ss_pred CCcCEEEEcCCC
Q 018158 247 RTLDFILDTVSA 258 (360)
Q Consensus 247 ~~~d~vid~~g~ 258 (360)
.++|++|++.|.
T Consensus 85 g~iD~lv~nAg~ 96 (280)
T 1xkq_A 85 GKIDVLVNNAGA 96 (280)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 479999999873
|
| >2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.027 Score=50.41 Aligned_cols=130 Identities=13% Similarity=0.150 Sum_probs=78.2
Q ss_pred EEEEEcCChHHHHH-HHHHHHcCCeEE-EEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHH
Q 018158 187 RIGIVGLGGLGHVA-VKFGKAFGHHVT-VISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGP 264 (360)
Q Consensus 187 ~vlI~Gag~vG~~a-iqla~~~G~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~ 264 (360)
++.|+|+|.+|... +..++..+.+++ +.++++++.+.+.+++|...++ .+.+.+. ....+|+|+.++........
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~--~~~~~~l-~~~~~D~V~i~tp~~~h~~~ 78 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSV--TSVEELV-GDPDVDAVYVSTTNELHREQ 78 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCB--SCHHHHH-TCTTCCEEEECSCGGGHHHH
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCccc--CCHHHHh-cCCCCCEEEEeCChhHhHHH
Confidence 57899999999875 544434778865 6677888877766668854332 2222211 12479999999998777777
Q ss_pred HHHHhccCCEEEEeCCCCCCcccChh------hH-hccCcEE-EEeecCCHHHHHHHHHHHhcCCCc
Q 018158 265 ILELLKVNGTLSVVGAPEAPFELPSF------PL-IFGKRSV-KGSMTGGMRETQEMMNVCGKYNIT 323 (360)
Q Consensus 265 ~~~~l~~~G~~v~~g~~~~~~~~~~~------~~-~~~~~~i-~~~~~~~~~~~~~~~~~l~~~~l~ 323 (360)
+..+++.|-.+ .+.. ++..+.. .+ -.+++.+ .+........++.+.+++.+|.+-
T Consensus 79 ~~~al~~Gk~v-~~ek---P~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~~g~iG 141 (332)
T 2glx_A 79 TLAAIRAGKHV-LCEK---PLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAIAEGRIG 141 (332)
T ss_dssp HHHHHHTTCEE-EECS---SSCSSHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHHTTTTS
T ss_pred HHHHHHCCCeE-EEeC---CCcCCHHHHHHHHHHHHHcCCEEEEeehhhcCHHHHHHHHHHHcCCCC
Confidence 88888876444 4432 2222221 11 1123333 233333334577777888887763
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0017 Score=55.96 Aligned_cols=90 Identities=18% Similarity=0.160 Sum_probs=59.0
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhc----CCCcCEEEEcCCCcc
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAG----KRTLDFILDTVSAKH 260 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~----~~~~d~vid~~g~~~ 260 (360)
+++||+|+ |++|..+++.+...|++|++++++.++.+. ....|-.+.+..... ..++|++|+++|...
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~ 74 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------DLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGP 74 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------CTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCT
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------ccccCCCCHHHHHHHHHHhCCCCCEEEECCCCCC
Confidence 47899999 999999999998899999999988653211 111122222222222 257899999998542
Q ss_pred ------------------cHHHHHHHhccC--CEEEEeCCCC
Q 018158 261 ------------------SLGPILELLKVN--GTLSVVGAPE 282 (360)
Q Consensus 261 ------------------~~~~~~~~l~~~--G~~v~~g~~~ 282 (360)
..+.++..|+.. |+++.++...
T Consensus 75 ~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~ 116 (257)
T 1fjh_A 75 QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVA 116 (257)
T ss_dssp TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGG
T ss_pred CcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChh
Confidence 124455555443 8999997644
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0036 Score=54.47 Aligned_cols=70 Identities=19% Similarity=0.230 Sum_probs=49.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-eEeeCccHHHHHhc-------CCCcCEEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-EFILSTNAMQMQAG-------KRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~-------~~~~d~vid 254 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++... ... ...|-.+.+..... ..++|++|+
T Consensus 13 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~ 87 (269)
T 3vtz_A 13 TDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVN-----VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVN 87 (269)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTT-----SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccC-----ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 7899999999 999999999998999999999988754311 111 12344444333222 358999999
Q ss_pred cCCC
Q 018158 255 TVSA 258 (360)
Q Consensus 255 ~~g~ 258 (360)
++|.
T Consensus 88 nAg~ 91 (269)
T 3vtz_A 88 NAGI 91 (269)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 9984
|
| >2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0056 Score=52.14 Aligned_cols=95 Identities=21% Similarity=0.222 Sum_probs=67.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHc---CCC---eEeeCccHHHHHhc----------
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAF--GHHVTVISTSPSKEKEAKELL---GAD---EFILSTNAMQMQAG---------- 245 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~--G~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~---------- 245 (360)
++++||-+|+| .|..+..+++.. +.+|++++.+++..+.+++.+ |.. .++..+..+.....
T Consensus 60 ~~~~VLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 60 GAKRIIEIGTF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp TCSEEEEECCT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred CcCEEEEEeCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 78899999997 488888999987 579999999999888877753 432 22222221212211
Q ss_pred -----C-CCcCEEEEcCCCc---ccHHHHHHHhccCCEEEEeC
Q 018158 246 -----K-RTLDFILDTVSAK---HSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 246 -----~-~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g 279 (360)
. ..+|+|+...+.. ..+..+.+.|+++|.++...
T Consensus 139 ~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 2 6799999776543 34678889999999998753
|
| >2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A | Back alignment and structure |
|---|
Probab=96.78 E-value=0.003 Score=57.95 Aligned_cols=90 Identities=17% Similarity=0.186 Sum_probs=67.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCc----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAK---- 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~---- 259 (360)
.|+++.|+|.|.+|...++.++.+|++|++.+++..+.+.+.+ +|...+ .+. .+.-...|+|+.++...
T Consensus 190 ~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~-~G~~~~---~~l---~ell~~aDvV~l~~Plt~~t~ 262 (393)
T 2nac_A 190 EAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKE-LNLTWH---ATR---EDMYPVCDVVTLNCPLHPETE 262 (393)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHH-HTCEEC---SSH---HHHGGGCSEEEECSCCCTTTT
T ss_pred CCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhh-cCceec---CCH---HHHHhcCCEEEEecCCchHHH
Confidence 5889999999999999999999999999999988765565555 775422 112 23345789999888632
Q ss_pred ccH-HHHHHHhccCCEEEEeCC
Q 018158 260 HSL-GPILELLKVNGTLSVVGA 280 (360)
Q Consensus 260 ~~~-~~~~~~l~~~G~~v~~g~ 280 (360)
..+ ...+..|+++..+++++.
T Consensus 263 ~li~~~~l~~mk~gailIN~aR 284 (393)
T 2nac_A 263 HMINDETLKLFKRGAYIVNTAR 284 (393)
T ss_dssp TCBSHHHHTTSCTTEEEEECSC
T ss_pred HHhhHHHHhhCCCCCEEEECCC
Confidence 123 467788899888888874
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0046 Score=54.25 Aligned_cols=74 Identities=19% Similarity=0.214 Sum_probs=52.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE----eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF----ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~----v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+. .|...+ .|-.+.+..... ..+
T Consensus 27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 106 (286)
T 1xu9_A 27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG 106 (286)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999 9999999999888999999999998877665432 243222 243443322221 248
Q ss_pred cCEEEEc-CC
Q 018158 249 LDFILDT-VS 257 (360)
Q Consensus 249 ~d~vid~-~g 257 (360)
+|++|++ .|
T Consensus 107 iD~li~naag 116 (286)
T 1xu9_A 107 LDMLILNHIT 116 (286)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCcc
Confidence 9999998 44
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0014 Score=57.08 Aligned_cols=95 Identities=20% Similarity=0.188 Sum_probs=61.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHH-------hcCCCcCEEEEc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQ-------AGKRTLDFILDT 255 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~-------~~~~~~d~vid~ 255 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++...... + ..|-.+.+... ....++|+++++
T Consensus 27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~-~----~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnn 101 (266)
T 3uxy_A 27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLH-L----PGDLREAAYADGLPGAVAAGLGRLDIVVNN 101 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSEE-C----CCCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhhc-c----CcCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 5789999999 999999999998999999999987654322111 1 11222322221 113579999999
Q ss_pred CCCcc-------------------------cHHHHHHHhcc--CCEEEEeCCCCC
Q 018158 256 VSAKH-------------------------SLGPILELLKV--NGTLSVVGAPEA 283 (360)
Q Consensus 256 ~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 283 (360)
+|... ..+.++..|+. +|+++.++...+
T Consensus 102 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~ 156 (266)
T 3uxy_A 102 AGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWG 156 (266)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHh
Confidence 98421 12334444443 689999976543
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.002 Score=55.53 Aligned_cols=88 Identities=22% Similarity=0.282 Sum_probs=56.8
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCh-------------------hHHHHHHHHc---CCC-eEe--eC-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSP-------------------SKEKEAKELL---GAD-EFI--LS- 236 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~-------------------~~~~~~~~~~---g~~-~~v--~~- 236 (360)
.+.+|+|+|+|++|..+++.+...|. ++++++++. .|.+.+++++ .+. .+. ..
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~ 109 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL 109 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEecc
Confidence 45789999999999999999999998 799999886 5555554433 222 221 11
Q ss_pred ccHHHHHhcCCCcCEEEEcCCCcccHHHHHHHhcc
Q 018158 237 TNAMQMQAGKRTLDFILDTVSAKHSLGPILELLKV 271 (360)
Q Consensus 237 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~ 271 (360)
-+.+...+.-.++|+|++|++.......+.+....
T Consensus 110 ~~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~ 144 (249)
T 1jw9_B 110 LDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFA 144 (249)
T ss_dssp CCHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHH
T ss_pred CCHhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHH
Confidence 11122233345899999999876543334344433
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0053 Score=55.71 Aligned_cols=69 Identities=17% Similarity=0.140 Sum_probs=52.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
.|++|+|.|.|.+|..+++.+...|++|++.+++.++.+.+.+.+|++.+ +..+ ......|+++-|...
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v-~~~~-----ll~~~~DIvip~a~~ 240 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-APNA-----IYGVTCDIFAPCALG 240 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-CGGG-----TTTCCCSEEEECSCS
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE-ChHH-----HhccCCcEeeccchH
Confidence 68999999999999999999999999999999999888866665776433 2111 112456777766543
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0035 Score=54.03 Aligned_cols=69 Identities=12% Similarity=0.113 Sum_probs=48.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-eEeeCccHHHHHh-------cCCCcCEEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-EFILSTNAMQMQA-------GKRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~-------~~~~~d~vid 254 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+. .. ...|-.+.+.... ...++|++|+
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~------~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~ 93 (253)
T 2nm0_A 20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG------FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIA 93 (253)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT------SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc------ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4789999999 999999999999999999999988654321 11 1124444333222 1357899999
Q ss_pred cCCC
Q 018158 255 TVSA 258 (360)
Q Consensus 255 ~~g~ 258 (360)
+.|.
T Consensus 94 nAg~ 97 (253)
T 2nm0_A 94 NAGV 97 (253)
T ss_dssp ECSC
T ss_pred CCCC
Confidence 8874
|
| >3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0014 Score=54.43 Aligned_cols=134 Identities=14% Similarity=0.168 Sum_probs=78.4
Q ss_pred cceeeEEE-eecceeEECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEE
Q 018158 135 GGYSEMLV-ADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVT 212 (360)
Q Consensus 135 g~~~~~~~-v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~ 212 (360)
-.|.+|.. .+....+.+++++.+..+.. +.. ......+... ++++++||-+|+|. |..+..+++. +. +|+
T Consensus 16 p~w~~~~~~~~~~~~~~~~~~~~f~~~~~-~~~-~~~~~~l~~~----~~~~~~vLDiG~G~-G~~~~~l~~~-~~~~v~ 87 (205)
T 3grz_A 16 PEWEDYQPVFKDQEIIRLDPGLAFGTGNH-QTT-QLAMLGIERA----MVKPLTVADVGTGS-GILAIAAHKL-GAKSVL 87 (205)
T ss_dssp ETTCCCCCSSTTCEEEEESCC-----CCH-HHH-HHHHHHHHHH----CSSCCEEEEETCTT-SHHHHHHHHT-TCSEEE
T ss_pred ccccccccCCCCceeEEecCCcccCCCCC-ccH-HHHHHHHHHh----ccCCCEEEEECCCC-CHHHHHHHHC-CCCEEE
Confidence 34566665 66677888888776655421 111 1112222211 23889999999976 7777777764 55 899
Q ss_pred EEeCChhHHHHHHHHc---CCC--eEeeCccHHHHHhcCCCcCEEEEcCCCc---ccHHHHHHHhccCCEEEEeC
Q 018158 213 VISTSPSKEKEAKELL---GAD--EFILSTNAMQMQAGKRTLDFILDTVSAK---HSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 213 ~~~~~~~~~~~~~~~~---g~~--~~v~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g 279 (360)
+++.+++..+.+++++ +.. .++..+- .......+|+|+...... ..+..+.+.|+++|+++...
T Consensus 88 ~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 159 (205)
T 3grz_A 88 ATDISDESMTAAEENAALNGIYDIALQKTSL---LADVDGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSG 159 (205)
T ss_dssp EEESCHHHHHHHHHHHHHTTCCCCEEEESST---TTTCCSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEE
T ss_pred EEECCHHHHHHHHHHHHHcCCCceEEEeccc---cccCCCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 9999999888777643 332 2222211 112346899999755432 12455667788999988753
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.011 Score=51.35 Aligned_cols=75 Identities=16% Similarity=0.164 Sum_probs=51.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVI-STSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~-~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|.++++.+...|++|+++ .++.++.+.+.+. .+.... .|-.+.+..... ..+
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 104 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR 104 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 6789999999 999999999999999998776 6777666554432 233211 233443332221 347
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|+++|.
T Consensus 105 id~li~nAg~ 114 (272)
T 4e3z_A 105 LDGLVNNAGI 114 (272)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999884
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.011 Score=51.31 Aligned_cols=75 Identities=17% Similarity=0.145 Sum_probs=50.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHH---cCCC-eE--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIS-TSPSKEKEAKEL---LGAD-EF--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~-~~~~~~~~~~~~---~g~~-~~--v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|.++++.+...|++|++++ ++.++.+..... .+.. .. .|-.+.+..... ..+
T Consensus 24 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 103 (269)
T 3gk3_A 24 AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGK 103 (269)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 6788999999 9999999999999999999998 555544443322 2322 11 244444333221 347
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|+++|.
T Consensus 104 id~li~nAg~ 113 (269)
T 3gk3_A 104 VDVLINNAGI 113 (269)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999999984
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0063 Score=53.77 Aligned_cols=74 Identities=19% Similarity=0.187 Sum_probs=53.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc--------CCCeE---eeCccHHHHHhc------
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL--------GADEF---ILSTNAMQMQAG------ 245 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~--------g~~~~---v~~~~~~~~~~~------ 245 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +.... .|-.+.+.....
T Consensus 17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 96 (303)
T 1yxm_A 17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD 96 (303)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence 5789999999 99999999999899999999999988766554432 22211 243443333222
Q ss_pred -CCCcCEEEEcCC
Q 018158 246 -KRTLDFILDTVS 257 (360)
Q Consensus 246 -~~~~d~vid~~g 257 (360)
..++|++|+++|
T Consensus 97 ~~g~id~li~~Ag 109 (303)
T 1yxm_A 97 TFGKINFLVNNGG 109 (303)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 247999999998
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0085 Score=53.03 Aligned_cols=92 Identities=21% Similarity=0.265 Sum_probs=62.8
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC-----hhHHHHHHHH--cCCCeE-eeCccHHHHHhcCCCcCEEEEc
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTS-----PSKEKEAKEL--LGADEF-ILSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~-----~~~~~~~~~~--~g~~~~-v~~~~~~~~~~~~~~~d~vid~ 255 (360)
..+|+|+|+ |.+|..+++.+...|.+|++++|+ +++.+.+++. .+...+ .|..+.+.+...-.++|+||.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 83 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 83 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence 357999999 999999999998889999999998 4444443321 233222 3555555555556689999999
Q ss_pred CCCc------ccHHHHHHHhccCC---EEE
Q 018158 256 VSAK------HSLGPILELLKVNG---TLS 276 (360)
Q Consensus 256 ~g~~------~~~~~~~~~l~~~G---~~v 276 (360)
++.. .....+++.++..| +++
T Consensus 84 a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v 113 (313)
T 1qyd_A 84 LAGGVLSHHILEQLKLVEAIKEAGNIKRFL 113 (313)
T ss_dssp CCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred CccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence 8743 22345666666544 776
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0024 Score=54.79 Aligned_cols=70 Identities=16% Similarity=0.204 Sum_probs=49.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhc-------CCCcCEEEEc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAG-------KRTLDFILDT 255 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~-------~~~~d~vid~ 255 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+. + ...|-.+.+..... ..++|++|++
T Consensus 14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~--~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ 88 (247)
T 1uzm_A 14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF---G--VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN 88 (247)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE---E--EECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc---C--eeccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 5789999999 99999999999899999999998865433211 1 22344444333221 3479999999
Q ss_pred CCC
Q 018158 256 VSA 258 (360)
Q Consensus 256 ~g~ 258 (360)
.|.
T Consensus 89 Ag~ 91 (247)
T 1uzm_A 89 AGL 91 (247)
T ss_dssp CSC
T ss_pred CCC
Confidence 884
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0033 Score=53.64 Aligned_cols=74 Identities=14% Similarity=0.153 Sum_probs=53.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHc-CCCe---EeeCccHHHHHhc--------C-C
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFG--HHVTVISTSPSKEKEAKELL-GADE---FILSTNAMQMQAG--------K-R 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G--~~V~~~~~~~~~~~~~~~~~-g~~~---~v~~~~~~~~~~~--------~-~ 247 (360)
.++++||+|+ |++|..+++.+...| ++|++++++.++.+.+++ + +... ..|-.+.+..... + .
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 80 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-IKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT-CCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh-ccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence 3678999999 999999999998899 999999999888776655 4 3221 1243443332222 1 1
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|++|+++|.
T Consensus 81 ~id~li~~Ag~ 91 (250)
T 1yo6_A 81 GLSLLINNAGV 91 (250)
T ss_dssp CCCEEEECCCC
T ss_pred CCcEEEECCcc
Confidence 79999999874
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=96.74 E-value=0.006 Score=59.53 Aligned_cols=98 Identities=16% Similarity=0.147 Sum_probs=64.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCh---------hHHHHHHHH---cCCCeEeeCccHHHH----H---
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSP---------SKEKEAKEL---LGADEFILSTNAMQM----Q--- 243 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~---------~~~~~~~~~---~g~~~~v~~~~~~~~----~--- 243 (360)
.++++||+|+ +++|.+.++.+...|++|++.+++. ++.+.+.+. .|...+.|..+.+.. .
T Consensus 7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~ 86 (604)
T 2et6_A 7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV 86 (604)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence 5788999999 9999999999999999999998654 333333221 354444454443211 1
Q ss_pred hcCCCcCEEEEcCCCc-------------------------ccHHHHHHHhc--cCCEEEEeCCC
Q 018158 244 AGKRTLDFILDTVSAK-------------------------HSLGPILELLK--VNGTLSVVGAP 281 (360)
Q Consensus 244 ~~~~~~d~vid~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g~~ 281 (360)
..-.++|+++++.|.. ...+.++..|+ .+|+|+.++..
T Consensus 87 ~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ 151 (604)
T 2et6_A 87 KNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSP 151 (604)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCH
Confidence 1145799999999832 11345566664 35899999764
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0078 Score=52.10 Aligned_cols=75 Identities=19% Similarity=0.154 Sum_probs=51.1
Q ss_pred CCcEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCChhHHH---HHHHHcCCCeE--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL---GGLGHVAVKFGKAFGHHVTVISTSPSKEK---EAKELLGADEF--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga---g~vG~~aiqla~~~G~~V~~~~~~~~~~~---~~~~~~g~~~~--v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ +++|..+++.+...|++|++++++....+ .+.+..+.... .|-.+.+..... ..+
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 92 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDS 92 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 7899999985 59999999998899999999988854333 33332442222 244444333221 357
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|+++|.
T Consensus 93 id~lv~nAg~ 102 (271)
T 3ek2_A 93 LDGLVHSIGF 102 (271)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCcc
Confidence 9999999874
|
| >3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0029 Score=57.23 Aligned_cols=89 Identities=20% Similarity=0.259 Sum_probs=66.1
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc---
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH--- 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~--- 260 (360)
.|+++.|+|.|.+|...++.++..|++|++.+++.. .+.+.+ .|...+ .+. .+.-...|+|+.++....
T Consensus 159 ~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~~~~-~g~~~~---~~l---~ell~~aDiV~l~~Plt~~t~ 230 (352)
T 3gg9_A 159 KGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENS-KERARA-DGFAVA---ESK---DALFEQSDVLSVHLRLNDETR 230 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHH-HHHHHH-TTCEEC---SSH---HHHHHHCSEEEECCCCSTTTT
T ss_pred CCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCC-HHHHHh-cCceEe---CCH---HHHHhhCCEEEEeccCcHHHH
Confidence 588999999999999999999999999999998753 344555 675422 122 222346899998876321
Q ss_pred --cHHHHHHHhccCCEEEEeCC
Q 018158 261 --SLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 261 --~~~~~~~~l~~~G~~v~~g~ 280 (360)
.-...+..|+++..+++++.
T Consensus 231 ~li~~~~l~~mk~gailIN~aR 252 (352)
T 3gg9_A 231 SIITVADLTRMKPTALFVNTSR 252 (352)
T ss_dssp TCBCHHHHTTSCTTCEEEECSC
T ss_pred HhhCHHHHhhCCCCcEEEECCC
Confidence 12577888999999999973
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0067 Score=54.24 Aligned_cols=91 Identities=18% Similarity=0.265 Sum_probs=66.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
...+|.|+|.|.+|...++.+...|.+|++.++++++.+.+.+ .|.... .+. .+.....|+||.|+.....+.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~-~g~~~~---~~~---~e~~~~aDvVi~~vp~~~~~~ 102 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAA-LGATIH---EQA---RAAARDADIVVSMLENGAVVQ 102 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-TTCEEE---SSH---HHHHTTCSEEEECCSSHHHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH-CCCEee---CCH---HHHHhcCCEEEEECCCHHHHH
Confidence 3458999999999999999988999999999999999888877 564322 111 223356899999998654444
Q ss_pred HHH------HHhccCCEEEEeCCC
Q 018158 264 PIL------ELLKVNGTLSVVGAP 281 (360)
Q Consensus 264 ~~~------~~l~~~G~~v~~g~~ 281 (360)
.++ ..++++..+++.+..
T Consensus 103 ~v~~~~~~~~~l~~~~~vi~~st~ 126 (320)
T 4dll_A 103 DVLFAQGVAAAMKPGSLFLDMASI 126 (320)
T ss_dssp HHHTTTCHHHHCCTTCEEEECSCC
T ss_pred HHHcchhHHhhCCCCCEEEecCCC
Confidence 443 356677777777543
|
| >1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1 | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0062 Score=54.34 Aligned_cols=96 Identities=20% Similarity=0.165 Sum_probs=67.0
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHc---CCCeE-eeCccHHHHHhcCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFG--HHVTVISTSPSKEKEAKELL---GADEF-ILSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G--~~V~~~~~~~~~~~~~~~~~---g~~~~-v~~~~~~~~~~~~~~~d~vid~ 255 (360)
++++++||-+|+|. |..++.+++..+ .+|++++.+++..+.+++++ |...+ +...+..........+|+|+..
T Consensus 73 ~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~ 151 (317)
T 1dl5_A 73 LDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVT 151 (317)
T ss_dssp CCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEEC
T ss_pred CCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEc
Confidence 44899999999976 888888888754 46999999999888887753 43222 1111111111123579999987
Q ss_pred CCCcccHHHHHHHhccCCEEEEe
Q 018158 256 VSAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 256 ~g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
.........+.+.|+++|+++..
T Consensus 152 ~~~~~~~~~~~~~LkpgG~lvi~ 174 (317)
T 1dl5_A 152 VGVDEVPETWFTQLKEGGRVIVP 174 (317)
T ss_dssp SBBSCCCHHHHHHEEEEEEEEEE
T ss_pred CCHHHHHHHHHHhcCCCcEEEEE
Confidence 66554557888999999998776
|
| >3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0083 Score=51.45 Aligned_cols=96 Identities=17% Similarity=0.190 Sum_probs=66.8
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHc---CCC---eEeeCccHHHHHhcC--CCcCEEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAF--GHHVTVISTSPSKEKEAKELL---GAD---EFILSTNAMQMQAGK--RTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~--G~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~~--~~~d~vi 253 (360)
++++||-+|+|. |..++.+++.. +.+|++++.+++..+.+++.+ |.. .++..+..+...... ..+|+|+
T Consensus 63 ~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 63 QAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp TCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred CCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 789999999974 88888889887 569999999999888877653 532 223222222233332 3799998
Q ss_pred EcCCCc---ccHHHHHHHhccCCEEEEeCC
Q 018158 254 DTVSAK---HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 254 d~~g~~---~~~~~~~~~l~~~G~~v~~g~ 280 (360)
-..... ..+..+.+.|++||.++.-..
T Consensus 142 ~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 142 IDADKPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp ECSCGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred ECCchHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 433322 346788899999999987644
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0046 Score=54.36 Aligned_cols=88 Identities=19% Similarity=0.242 Sum_probs=63.4
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHHH
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPI 265 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 265 (360)
.+|.|+|.|.+|...++.+...|.+|++.++++++.+.+.+ .|.... .+. .+.-...|+||.|+.....+...
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~~---~~~---~~~~~~aDvvi~~vp~~~~~~~v 74 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAA-LGAERA---ATP---CEVVESCPVTFAMLADPAAAEEV 74 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH-TTCEEC---SSH---HHHHHHCSEEEECCSSHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-CCCeec---CCH---HHHHhcCCEEEEEcCCHHHHHHH
Confidence 46889999999999999999999999999999999888887 664321 122 11223579999999865334444
Q ss_pred H-------HHhccCCEEEEeCC
Q 018158 266 L-------ELLKVNGTLSVVGA 280 (360)
Q Consensus 266 ~-------~~l~~~G~~v~~g~ 280 (360)
+ ..++++..+++.+.
T Consensus 75 ~~~~~~l~~~l~~~~~vi~~st 96 (287)
T 3pef_A 75 CFGKHGVLEGIGEGRGYVDMST 96 (287)
T ss_dssp HHSTTCHHHHCCTTCEEEECSC
T ss_pred HcCcchHhhcCCCCCEEEeCCC
Confidence 4 55667767766643
|
| >3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.02 Score=51.59 Aligned_cols=131 Identities=15% Similarity=0.094 Sum_probs=82.1
Q ss_pred cEEEEEcCChHHHHHHHHHHHc-CCeEE-EEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAF-GHHVT-VISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~-G~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
-++.|+|+|.+|...+..++.. +++++ +.++++++.+.+.+++|. ..+ .+.+.+. ....+|+|+.|+....+..
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~-~~~--~~~~~~l-~~~~~D~V~i~tp~~~h~~ 80 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGA-EAV--ASPDEVF-ARDDIDGIVIGSPTSTHVD 80 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTC-EEE--SSHHHHT-TCSCCCEEEECSCGGGHHH
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCC-cee--CCHHHHh-cCCCCCEEEEeCCchhhHH
Confidence 4689999999999877777765 67766 677788887776665783 232 2222211 1347999999999887778
Q ss_pred HHHHHhccCCEEEEeCCCCCCcccChh------hH-hccCc-EEEEeecCCHHHHHHHHHHHhcCCCcc
Q 018158 264 PILELLKVNGTLSVVGAPEAPFELPSF------PL-IFGKR-SVKGSMTGGMRETQEMMNVCGKYNITC 324 (360)
Q Consensus 264 ~~~~~l~~~G~~v~~g~~~~~~~~~~~------~~-~~~~~-~i~~~~~~~~~~~~~~~~~l~~~~l~~ 324 (360)
.+..+++.|.+ +.+..+ +..+.. .. -.+++ -..++.......++.+.+++.+|.+-.
T Consensus 81 ~~~~al~~gk~-v~~EKP---~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~ 145 (344)
T 3euw_A 81 LITRAVERGIP-ALCEKP---IDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFAAINARVANQEIGN 145 (344)
T ss_dssp HHHHHHHTTCC-EEECSC---SCSCHHHHHHHHHHHGGGGGGEEECCGGGGCHHHHHHHHHHHTTTTSS
T ss_pred HHHHHHHcCCc-EEEECC---CCCCHHHHHHHHHHHHhcCCeEEecchhhcCHHHHHHHHHHhcCCCCc
Confidence 88888887754 444332 222211 11 11222 333333333456788888888887744
|
| >2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0029 Score=54.80 Aligned_cols=97 Identities=20% Similarity=0.272 Sum_probs=71.6
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcCC-hHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHcCCCeEeeCc
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLG-GLGHVAVKFGKAF--GHHVTVISTSPSKEKEAKELLGADEFILST 237 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag-~vG~~aiqla~~~--G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~ 237 (360)
..+||+...+...+++.+.-- .|++++|+|.| .+|..+++++... |++|++..+....+
T Consensus 136 ~~~PcTp~gi~~ll~~~~i~l--~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~L---------------- 197 (281)
T 2c2x_A 136 APLPCTPRGIVHLLRRYDISI--AGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDL---------------- 197 (281)
T ss_dssp CCCCHHHHHHHHHHHHTTCCC--TTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSCH----------------
T ss_pred CCCCChHHHHHHHHHHcCCCC--CCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhHH----------------
Confidence 456777777777777765322 79999999996 5799999999999 89999987554222
Q ss_pred cHHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 238 NAMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 238 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.+.-+.+|++|.++|....+. -++++++..++++|...
T Consensus 198 -----~~~~~~ADIVI~Avg~p~~I~--~~~vk~GavVIDVgi~r 235 (281)
T 2c2x_A 198 -----PALTRQADIVVAAVGVAHLLT--ADMVRPGAAVIDVGVSR 235 (281)
T ss_dssp -----HHHHTTCSEEEECSCCTTCBC--GGGSCTTCEEEECCEEE
T ss_pred -----HHHHhhCCEEEECCCCCcccC--HHHcCCCcEEEEccCCC
Confidence 122357899999999774332 24578888999998753
|
| >1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21 | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0043 Score=53.22 Aligned_cols=96 Identities=20% Similarity=0.181 Sum_probs=66.0
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCC-eE-eeCccHHHHHhcCCCcCEEEEcC
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGAD-EF-ILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~-~~-v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
++++.+||-+|+|. |..+..+++..|.+|++++.+++.++.++++ .|.. .+ +...+...... ...+|+|+...
T Consensus 34 ~~~~~~VLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V~~~~ 111 (256)
T 1nkv_A 34 MKPGTRILDLGSGS-GEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDVAACVG 111 (256)
T ss_dssp CCTTCEEEEETCTT-CHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEEEEEES
T ss_pred CCCCCEEEEECCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCEEEECC
Confidence 44899999999976 8888899988899999999999888777664 2421 11 11111111111 46799998632
Q ss_pred C------CcccHHHHHHHhccCCEEEEeC
Q 018158 257 S------AKHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 257 g------~~~~~~~~~~~l~~~G~~v~~g 279 (360)
. ....+..+.+.|++||+++...
T Consensus 112 ~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 112 ATWIAGGFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp CGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred ChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence 2 2234788889999999998753
|
| >3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A* | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0059 Score=54.28 Aligned_cols=96 Identities=18% Similarity=0.167 Sum_probs=66.6
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCC--eEeeCccHHHHHhcCCCcCEEEEcCC
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGAD--EFILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~--~~v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
+++++||-+|+|. |..+..+++..|++|++++.+++..+.++++ .|.. -.+...+..........+|+|+....
T Consensus 116 ~~~~~vLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 194 (312)
T 3vc1_A 116 GPDDTLVDAGCGR-GGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNES 194 (312)
T ss_dssp CTTCEEEEESCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESC
T ss_pred CCCCEEEEecCCC-CHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCc
Confidence 3899999999964 7778888888799999999999988877764 3322 11111111111112467999986432
Q ss_pred -----CcccHHHHHHHhccCCEEEEeC
Q 018158 258 -----AKHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 258 -----~~~~~~~~~~~l~~~G~~v~~g 279 (360)
-...+..+.+.|++||+++...
T Consensus 195 l~~~~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 195 TMYVDLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp GGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 2345788999999999998765
|
| >2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0054 Score=55.22 Aligned_cols=88 Identities=26% Similarity=0.363 Sum_probs=66.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc---
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH--- 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~--- 260 (360)
.++++.|+|.|.+|...++.++..|.+|++.+++.++ +.+.+ +|... .+. .+.-...|+|+.++....
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~-~g~~~----~~l---~~~l~~aDvVil~vp~~~~t~ 219 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERE-LNAEF----KPL---EDLLRESDFVVLAVPLTRETY 219 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHH-HCCEE----CCH---HHHHHHCSEEEECCCCCTTTT
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHhh-cCccc----CCH---HHHHhhCCEEEECCCCChHHH
Confidence 5789999999999999999999999999999998876 55555 66531 122 122246899999887542
Q ss_pred -cH-HHHHHHhccCCEEEEeCC
Q 018158 261 -SL-GPILELLKVNGTLSVVGA 280 (360)
Q Consensus 261 -~~-~~~~~~l~~~G~~v~~g~ 280 (360)
.+ ...+..|+++..+++++.
T Consensus 220 ~~i~~~~~~~mk~~ailIn~sr 241 (334)
T 2dbq_A 220 HLINEERLKLMKKTAILINIAR 241 (334)
T ss_dssp TCBCHHHHHHSCTTCEEEECSC
T ss_pred HhhCHHHHhcCCCCcEEEECCC
Confidence 22 466788999988888863
|
| >1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0088 Score=52.05 Aligned_cols=89 Identities=15% Similarity=0.203 Sum_probs=63.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS- 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~- 261 (360)
.+++++|+|+|+++.+++..+...|+ +|+++.|+.++.+.+.+.++.+ . .. +. . ...+|+||+|++....
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~-~-~~-~~---~--~~~~DivInaTp~gm~~ 189 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA-Y-IN-SL---E--NQQADILVNVTSIGMKG 189 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE-E-ES-CC---T--TCCCSEEEECSSTTCTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-c-ch-hh---h--cccCCEEEECCCCCccC
Confidence 56889999999999999999999998 7999999998877776657742 1 11 11 1 2579999999985421
Q ss_pred ------HHHHHHHhccCCEEEEeCC
Q 018158 262 ------LGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 262 ------~~~~~~~l~~~G~~v~~g~ 280 (360)
.......++++..++++-.
T Consensus 190 ~~~~~~~~~~~~~l~~~~~v~DlvY 214 (271)
T 1npy_A 190 GKEEMDLAFPKAFIDNASVAFDVVA 214 (271)
T ss_dssp STTTTSCSSCHHHHHHCSEEEECCC
T ss_pred ccccCCCCCCHHHcCCCCEEEEeec
Confidence 1111345667777777754
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.001 Score=57.32 Aligned_cols=88 Identities=14% Similarity=0.095 Sum_probs=60.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCc---
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAK--- 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~--- 259 (360)
.+ +++|+|+|++|.+++..+...|+ +|+++.|+.++.+.+.+.++. ....+ ..+.-.++|+||+|++..
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~---~~~~~---~~~~~~~aDiVInatp~gm~p 180 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKI---FSLDQ---LDEVVKKAKSLFNTTSVGMKG 180 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEE---EEGGG---HHHHHHTCSEEEECSSTTTTS
T ss_pred CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHccc---CCHHH---HHhhhcCCCEEEECCCCCCCC
Confidence 46 89999999999999999999999 899999998876655443331 22222 222335799999998532
Q ss_pred --ccHHHHHHHhccCCEEEEeCC
Q 018158 260 --HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 260 --~~~~~~~~~l~~~G~~v~~g~ 280 (360)
..+ -...++++..++++-.
T Consensus 181 ~~~~i--~~~~l~~~~~V~Divy 201 (253)
T 3u62_A 181 EELPV--SDDSLKNLSLVYDVIY 201 (253)
T ss_dssp CCCSC--CHHHHTTCSEEEECSS
T ss_pred CCCCC--CHHHhCcCCEEEEeeC
Confidence 112 1345677777766643
|
| >3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0054 Score=51.08 Aligned_cols=93 Identities=14% Similarity=0.133 Sum_probs=66.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhcCCCcCEEEEcCCC----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAGKRTLDFILDTVSA---- 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g~---- 258 (360)
++.+||-+|+|. |..+..+++. |.+|++++.+++..+.+++ .+...+ +...+.... .....+|+|+....-
T Consensus 46 ~~~~vLdiG~G~-G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~-~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~ 121 (218)
T 3ou2_A 46 IRGDVLELASGT-GYWTRHLSGL-ADRVTALDGSAEMIAEAGR-HGLDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHVP 121 (218)
T ss_dssp SCSEEEEESCTT-SHHHHHHHHH-SSEEEEEESCHHHHHHHGG-GCCTTEEEEECCTTSC-CCSSCEEEEEEESCGGGSC
T ss_pred CCCeEEEECCCC-CHHHHHHHhc-CCeEEEEeCCHHHHHHHHh-cCCCCeEEEecccccC-CCCCceeEEEEechhhcCC
Confidence 788999999965 7777777777 8899999999999888887 663222 211221111 235679999975432
Q ss_pred ----cccHHHHHHHhccCCEEEEeCC
Q 018158 259 ----KHSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 259 ----~~~~~~~~~~l~~~G~~v~~g~ 280 (360)
...+..+.+.|+++|.++....
T Consensus 122 ~~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 122 DDRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 2346788899999999987754
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0064 Score=52.46 Aligned_cols=74 Identities=12% Similarity=0.104 Sum_probs=52.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHh----c----CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQA----G----KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~----~----~~~ 248 (360)
.++++||+|+ |++|.++++.+...|++|++++++.++.+.+.+.+ |.... .|-.+.+.... . ..+
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~ 83 (260)
T 2qq5_A 4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR 83 (260)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 5788999999 99999999999999999999999988776554433 43211 24344322211 1 357
Q ss_pred cCEEEEcCC
Q 018158 249 LDFILDTVS 257 (360)
Q Consensus 249 ~d~vid~~g 257 (360)
+|+++++.|
T Consensus 84 id~lvnnAg 92 (260)
T 2qq5_A 84 LDVLVNNAY 92 (260)
T ss_dssp CCEEEECCC
T ss_pred ceEEEECCc
Confidence 899999994
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0046 Score=54.62 Aligned_cols=87 Identities=20% Similarity=0.245 Sum_probs=63.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHHHH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPIL 266 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~ 266 (360)
+|.|+|+|.+|...+..+...|.+|+++++++++.+.+.+ .|... ..+... .-.+.|+||.|+.....+..++
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-~g~~~---~~~~~~---~~~~~D~vi~~v~~~~~~~~~~ 79 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA-AGAET---ASTAKA---IAEQCDVIITMLPNSPHVKEVA 79 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCEE---CSSHHH---HHHHCSEEEECCSSHHHHHHHH
T ss_pred eEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-CCCee---cCCHHH---HHhCCCEEEEECCCHHHHHHHH
Confidence 6899999999999888888889999999999998888877 56421 222211 1235899999998654444444
Q ss_pred -------HHhccCCEEEEeCC
Q 018158 267 -------ELLKVNGTLSVVGA 280 (360)
Q Consensus 267 -------~~l~~~G~~v~~g~ 280 (360)
..++++..+++++.
T Consensus 80 ~~~~~l~~~l~~~~~vv~~s~ 100 (299)
T 1vpd_A 80 LGENGIIEGAKPGTVLIDMSS 100 (299)
T ss_dssp HSTTCHHHHCCTTCEEEECSC
T ss_pred hCcchHhhcCCCCCEEEECCC
Confidence 55677777777643
|
| >4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A* | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0019 Score=58.07 Aligned_cols=89 Identities=16% Similarity=0.246 Sum_probs=66.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCc----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAK---- 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~---- 259 (360)
.|+++.|+|.|.+|...++.++..|++|++.+++..+.+.+.+ +|.... +. .+.-...|+|+.++...
T Consensus 144 ~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~-~g~~~~----~l---~ell~~aDvV~l~~P~t~~t~ 215 (330)
T 4e5n_A 144 DNATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQR-LGLRQV----AC---SELFASSDFILLALPLNADTL 215 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHH-HTEEEC----CH---HHHHHHCSEEEECCCCSTTTT
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHh-cCceeC----CH---HHHHhhCCEEEEcCCCCHHHH
Confidence 5889999999999999999999999999999998755555555 664221 22 22234589999887632
Q ss_pred -ccHHHHHHHhccCCEEEEeCC
Q 018158 260 -HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 260 -~~~~~~~~~l~~~G~~v~~g~ 280 (360)
......+..|+++..+++++.
T Consensus 216 ~li~~~~l~~mk~gailIN~ar 237 (330)
T 4e5n_A 216 HLVNAELLALVRPGALLVNPCR 237 (330)
T ss_dssp TCBCHHHHTTSCTTEEEEECSC
T ss_pred HHhCHHHHhhCCCCcEEEECCC
Confidence 112577788999988888874
|
| >2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.64 E-value=0.014 Score=50.91 Aligned_cols=86 Identities=24% Similarity=0.231 Sum_probs=61.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-eEeeCccHHHHHhcCCCcCEEEEcCCCcccHHHH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-EFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPI 265 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 265 (360)
+|.|+|+|.+|.+.+..+...|.+|+++++++++.+.+.+ .|.. .... + ..+. .+.|+||.|+.... +..+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~~--~---~~~~-~~~D~vi~av~~~~-~~~~ 73 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVE-RQLVDEAGQ--D---LSLL-QTAKIIFLCTPIQL-ILPT 73 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTSCSEEES--C---GGGG-TTCSEEEECSCHHH-HHHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-CCCCccccC--C---HHHh-CCCCEEEEECCHHH-HHHH
Confidence 5889999999999999888889999999999999888876 7753 2211 1 2234 68999999998642 3333
Q ss_pred HH----HhccCCEEEEeCC
Q 018158 266 LE----LLKVNGTLSVVGA 280 (360)
Q Consensus 266 ~~----~l~~~G~~v~~g~ 280 (360)
++ .++++..+++++.
T Consensus 74 ~~~l~~~~~~~~~vv~~~~ 92 (279)
T 2f1k_A 74 LEKLIPHLSPTAIVTDVAS 92 (279)
T ss_dssp HHHHGGGSCTTCEEEECCS
T ss_pred HHHHHhhCCCCCEEEECCC
Confidence 33 3455666666643
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.006 Score=52.35 Aligned_cols=70 Identities=16% Similarity=0.178 Sum_probs=49.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe-EeeCccHHHHHhc-------CCCcCEEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE-FILSTNAMQMQAG-------KRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~-------~~~~d~vid 254 (360)
.++++||+|+ |++|.++++.+...|++|++++++.+. .+ .+... ..|-.+.+..... ..++|++|+
T Consensus 6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~----~~-~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~ 80 (250)
T 2fwm_X 6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ----EQ-YPFATEVMDVADAAQVAQVCQRLLAETERLDALVN 80 (250)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS----SC-CSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh----hc-CCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5789999999 999999999999999999999988652 11 34211 1244444333222 357999999
Q ss_pred cCCC
Q 018158 255 TVSA 258 (360)
Q Consensus 255 ~~g~ 258 (360)
+.|.
T Consensus 81 ~Ag~ 84 (250)
T 2fwm_X 81 AAGI 84 (250)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 9984
|
| >1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36 | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0019 Score=53.63 Aligned_cols=92 Identities=12% Similarity=0.002 Sum_probs=60.6
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC-----------------CeEeeCccHHHHHh
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA-----------------DEFILSTNAMQMQA 244 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~-----------------~~~v~~~~~~~~~~ 244 (360)
+.++.+||.+|+|. |..+..+++. |++|++++.+++-++.++++.+. -..+.. +......
T Consensus 20 ~~~~~~vLD~GCG~-G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-d~~~l~~ 96 (203)
T 1pjz_A 20 VVPGARVLVPLCGK-SQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCG-DFFALTA 96 (203)
T ss_dssp CCTTCEEEETTTCC-SHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEE-CCSSSTH
T ss_pred cCCCCEEEEeCCCC-cHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEEC-ccccCCc
Confidence 34889999999864 6667777776 89999999999999998886432 011111 1101111
Q ss_pred cC-CCcCEEEEcCCCc--------ccHHHHHHHhccCCEEE
Q 018158 245 GK-RTLDFILDTVSAK--------HSLGPILELLKVNGTLS 276 (360)
Q Consensus 245 ~~-~~~d~vid~~g~~--------~~~~~~~~~l~~~G~~v 276 (360)
.. ..+|+|++...-. ..+..+.+.|++||+++
T Consensus 97 ~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~ 137 (203)
T 1pjz_A 97 RDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGL 137 (203)
T ss_dssp HHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEE
T ss_pred ccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 11 4799999743211 13577889999999933
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0055 Score=59.97 Aligned_cols=98 Identities=12% Similarity=0.123 Sum_probs=59.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC---------ChhHHHHHHHH---cCCCeEeeCccHHHHHhc-----
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIST---------SPSKEKEAKEL---LGADEFILSTNAMQMQAG----- 245 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~---------~~~~~~~~~~~---~g~~~~v~~~~~~~~~~~----- 245 (360)
.|+++||+|+ +++|.+.++.+...|++|+++++ +.++.+.+.+. .+...+.|..+.+.....
T Consensus 18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~ 97 (613)
T 3oml_A 18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAI 97 (613)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC---
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHH
Confidence 5789999999 99999999988889999999876 44433333222 455555555554332221
Q ss_pred --CCCcCEEEEcCCCcc-------------------------cHHHHHHHhcc--CCEEEEeCCC
Q 018158 246 --KRTLDFILDTVSAKH-------------------------SLGPILELLKV--NGTLSVVGAP 281 (360)
Q Consensus 246 --~~~~d~vid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~ 281 (360)
..++|++|+++|... ..+.++..|+. +|+|+.++..
T Consensus 98 ~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~ 162 (613)
T 3oml_A 98 KAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSN 162 (613)
T ss_dssp -------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCH
T ss_pred HHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCH
Confidence 247999999998420 12344555553 4799998764
|
| >2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A* | Back alignment and structure |
|---|
Probab=96.62 E-value=0.002 Score=55.57 Aligned_cols=94 Identities=17% Similarity=0.214 Sum_probs=64.3
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC-eEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD-EFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
+++++||-+|+|. |..++.+++ .|++|++++.++...+.+++++ +.. .++..+-.+.. ....+|+|+.....
T Consensus 119 ~~~~~VLDiGcG~-G~l~~~la~-~g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~--~~~~fD~Vv~n~~~ 194 (254)
T 2nxc_A 119 RPGDKVLDLGTGS-GVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAAL--PFGPFDLLVANLYA 194 (254)
T ss_dssp CTTCEEEEETCTT-SHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHG--GGCCEEEEEEECCH
T ss_pred CCCCEEEEecCCC-cHHHHHHHH-hCCeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcC--cCCCCCEEEECCcH
Confidence 3889999999976 777777776 4779999999999887777642 332 22222111111 14579999965421
Q ss_pred ---cccHHHHHHHhccCCEEEEeCC
Q 018158 259 ---KHSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 259 ---~~~~~~~~~~l~~~G~~v~~g~ 280 (360)
...+..+.+.++++|+++..+.
T Consensus 195 ~~~~~~l~~~~~~LkpgG~lils~~ 219 (254)
T 2nxc_A 195 ELHAALAPRYREALVPGGRALLTGI 219 (254)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEee
Confidence 2346778889999999988754
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=96.62 E-value=0.011 Score=51.81 Aligned_cols=90 Identities=18% Similarity=0.240 Sum_probs=61.5
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc------------CCCe---------EeeCccHHHHHh
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL------------GADE---------FILSTNAMQMQA 244 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~------------g~~~---------~v~~~~~~~~~~ 244 (360)
++|.|+|+|.+|...++.+...|.+|++.++++++.+.+++.+ +... +... ....+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~---~~~~~ 81 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYS---DDLAQ 81 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEE---SCHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEe---CCHHH
Confidence 5789999999999999999999999999999999887776631 1100 0000 11122
Q ss_pred cCCCcCEEEEcCCCc-----ccHHHHHHHhccCCEEEEe
Q 018158 245 GKRTLDFILDTVSAK-----HSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 245 ~~~~~d~vid~~g~~-----~~~~~~~~~l~~~G~~v~~ 278 (360)
.-.+.|+||+++... ..+..+...++++..+++.
T Consensus 82 ~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~ 120 (283)
T 4e12_A 82 AVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATN 120 (283)
T ss_dssp HTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred HhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEEC
Confidence 346799999999864 1234555566676665544
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0083 Score=51.06 Aligned_cols=74 Identities=12% Similarity=0.076 Sum_probs=52.8
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCC-------eEEEEeCChhHHHHHHHHc---CCCe-E--eeCccHHHHHhc-----
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGH-------HVTVISTSPSKEKEAKELL---GADE-F--ILSTNAMQMQAG----- 245 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~-------~V~~~~~~~~~~~~~~~~~---g~~~-~--v~~~~~~~~~~~----- 245 (360)
++++||+|+ |++|..+++.+...|+ +|++++++.++.+.+.+.+ +... . .|-.+.+.....
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV 81 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence 578999999 9999999988888899 9999999988776665433 3221 1 244443333222
Q ss_pred --CCCcCEEEEcCCC
Q 018158 246 --KRTLDFILDTVSA 258 (360)
Q Consensus 246 --~~~~d~vid~~g~ 258 (360)
..++|++|+++|.
T Consensus 82 ~~~g~id~li~~Ag~ 96 (244)
T 2bd0_A 82 ERYGHIDCLVNNAGV 96 (244)
T ss_dssp HHTSCCSEEEECCCC
T ss_pred HhCCCCCEEEEcCCc
Confidence 3479999999883
|
| >3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.019 Score=52.18 Aligned_cols=131 Identities=15% Similarity=0.124 Sum_probs=82.3
Q ss_pred cEEEEEcCChHHHHHHHHHHHc-CCeEEE-EeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAF-GHHVTV-ISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~-G~~V~~-~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
-++.|+|+|.+|...+..++.. ++++++ .++++++.+.+++ +|.. . +.+.+.+.. ...+|+|+.|+.......
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~-~g~~-~--~~~~~~ll~-~~~~D~V~i~tp~~~h~~ 80 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQ-KGLK-I--YESYEAVLA-DEKVDAVLIATPNDSHKE 80 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHT-TTCC-B--CSCHHHHHH-CTTCCEEEECSCGGGHHH
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHh-cCCc-e--eCCHHHHhc-CCCCCEEEEcCCcHHHHH
Confidence 4689999999999887777766 678664 5677777766655 7763 2 233322211 357999999999887788
Q ss_pred HHHHHhccCCEEEEeCCCCCCcccChhh------H-hccCc-EEEEeecCCHHHHHHHHHHHhcCCCccc
Q 018158 264 PILELLKVNGTLSVVGAPEAPFELPSFP------L-IFGKR-SVKGSMTGGMRETQEMMNVCGKYNITCN 325 (360)
Q Consensus 264 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~------~-~~~~~-~i~~~~~~~~~~~~~~~~~l~~~~l~~~ 325 (360)
.+..+++.|..+ .+-. ++..+... + -.+++ -..++.......++.+.+++.+|.+-.+
T Consensus 81 ~~~~al~aGkhV-l~EK---P~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i 146 (359)
T 3e18_A 81 LAISALEAGKHV-VCEK---PVTMTSEDLLAIMDVAKRVNKHFMVHQNRRWDEDFLIIKEMFEQKTIGEM 146 (359)
T ss_dssp HHHHHHHTTCEE-EEES---SCCSSHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHHTTTSSE
T ss_pred HHHHHHHCCCCE-EeeC---CCcCCHHHHHHHHHHHHHhCCeEEEEeeeccCHHHHHHHHHHHcCCCCCe
Confidence 888888877554 4432 22222211 1 11233 3334444334567788888888877443
|
| >1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0095 Score=51.99 Aligned_cols=95 Identities=18% Similarity=0.206 Sum_probs=66.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHc-----CC----CeEeeCccHHHHHhcCCCcCEEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELL-----GA----DEFILSTNAMQMQAGKRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~-----g~----~~~v~~~~~~~~~~~~~~~d~vi 253 (360)
.+++||++|+|. |..+..+++..+ .+|++++.+++-.+.+++.+ +. -.++..+..+........+|+|+
T Consensus 75 ~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 75 NPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCEEEEECCch-HHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 568899999863 666777787766 58999999999888888755 21 12333333333333456799998
Q ss_pred EcCCC----------cccHHHHHHHhccCCEEEEeC
Q 018158 254 DTVSA----------KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 254 d~~g~----------~~~~~~~~~~l~~~G~~v~~g 279 (360)
.-... ...+..+.+.|+++|.++...
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 54322 235789999999999998763
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0059 Score=53.92 Aligned_cols=92 Identities=15% Similarity=0.163 Sum_probs=62.7
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCh-------hHHHHHHH--HcCCCeE-eeCccHHHHHhcCCCcCEEE
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSP-------SKEKEAKE--LLGADEF-ILSTNAMQMQAGKRTLDFIL 253 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~-------~~~~~~~~--~~g~~~~-v~~~~~~~~~~~~~~~d~vi 253 (360)
+++|+|+|+ |.+|..+++.+...|.+|++++|+. ++.+.+++ ..|...+ .|..+.+.+...-.++|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 357999999 9999999998888899999999986 55444332 1344322 35555555555566899999
Q ss_pred EcCCCc--ccHHHHHHHhccC---CEEE
Q 018158 254 DTVSAK--HSLGPILELLKVN---GTLS 276 (360)
Q Consensus 254 d~~g~~--~~~~~~~~~l~~~---G~~v 276 (360)
++++.. .....+++.++.. ++++
T Consensus 82 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v 109 (307)
T 2gas_A 82 CAAGRLLIEDQVKIIKAIKEAGNVKKFF 109 (307)
T ss_dssp ECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred ECCcccccccHHHHHHHHHhcCCceEEe
Confidence 999853 2234555555543 4666
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0091 Score=53.11 Aligned_cols=92 Identities=17% Similarity=0.199 Sum_probs=62.8
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCh------hHHHHHHH--HcCCCeE-eeCccHHHHHhcCCCcCEEEE
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSP------SKEKEAKE--LLGADEF-ILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~------~~~~~~~~--~~g~~~~-v~~~~~~~~~~~~~~~d~vid 254 (360)
..+|+|+|+ |.+|..+++.+...|.+|++++|+. ++.+.+.+ ..+...+ .|..+.+.+...-.++|+||.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~ 83 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS 83 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 467999999 9999999999888999999999985 33333322 1344322 355565556666678999999
Q ss_pred cCCCc--ccHHHHHHHhccC---CEEE
Q 018158 255 TVSAK--HSLGPILELLKVN---GTLS 276 (360)
Q Consensus 255 ~~g~~--~~~~~~~~~l~~~---G~~v 276 (360)
+++.. .....+++.++.. ++++
T Consensus 84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (321)
T 3c1o_A 84 ALPFPMISSQIHIINAIKAAGNIKRFL 110 (321)
T ss_dssp CCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred CCCccchhhHHHHHHHHHHhCCccEEe
Confidence 98853 2235556666543 3776
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0032 Score=54.12 Aligned_cols=99 Identities=15% Similarity=0.161 Sum_probs=61.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHH---cCCCeE---eeCccHHHHHhc----------
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVI-STSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG---------- 245 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~-~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~---------- 245 (360)
.++++||+|+ +++|.++++.+...|++|+++ .++.++.+...+. .+.... .|-.+.+.....
T Consensus 6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (255)
T 3icc_A 6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 85 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence 6789999999 999999999999999998886 5555554444332 232211 233333222111
Q ss_pred ---CCCcCEEEEcCCCcc-------------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 246 ---KRTLDFILDTVSAKH-------------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 246 ---~~~~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
..++|+++++.|... ..+.++..++++|+++.++...
T Consensus 86 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~ 150 (255)
T 3icc_A 86 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAA 150 (255)
T ss_dssp HHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGG
T ss_pred cccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChh
Confidence 135999999998420 0122333445678999997654
|
| >3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A* | Back alignment and structure |
|---|
Probab=96.56 E-value=0.025 Score=51.23 Aligned_cols=132 Identities=14% Similarity=0.044 Sum_probs=84.1
Q ss_pred cEEEEEcCChHHHHHHHHHHHc--CCeEE-EEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAF--GHHVT-VISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~--G~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
-++.|+|+|.+|...+..++.. +++++ +.++++++.+.+.+++|. ..+ .+.+.+-. ...+|+|+.|+....+.
T Consensus 14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~-~~~--~~~~~ll~-~~~~D~V~i~tp~~~h~ 89 (354)
T 3q2i_A 14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RGH--ASLTDMLA-QTDADIVILTTPSGLHP 89 (354)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC-EEE--SCHHHHHH-HCCCSEEEECSCGGGHH
T ss_pred ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC-cee--CCHHHHhc-CCCCCEEEECCCcHHHH
Confidence 5789999999998877777765 67755 667888887777776886 332 22222211 25799999999988777
Q ss_pred HHHHHHhccCCEEEEeCCCCCCcccChh------hH-hccCcE-EEEeecCCHHHHHHHHHHHhcCCCccc
Q 018158 263 GPILELLKVNGTLSVVGAPEAPFELPSF------PL-IFGKRS-VKGSMTGGMRETQEMMNVCGKYNITCN 325 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~------~~-~~~~~~-i~~~~~~~~~~~~~~~~~l~~~~l~~~ 325 (360)
..+..+++.|.+ +.+..+ +..+.. .+ -.++.. ..++.......++.+.+++.+|.+-.+
T Consensus 90 ~~~~~al~~gk~-v~~EKP---~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i 156 (354)
T 3q2i_A 90 TQSIECSEAGFH-VMTEKP---MATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQEKRFGRI 156 (354)
T ss_dssp HHHHHHHHTTCE-EEECSS---SCSSHHHHHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTTTTCSE
T ss_pred HHHHHHHHCCCC-EEEeCC---CcCCHHHHHHHHHHHHHhCCeEEEEEcccCCHHHHHHHHHHhcCCCCce
Confidence 788888887754 444332 222221 11 112333 334443334567888889999887544
|
| >3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.052 Score=48.84 Aligned_cols=131 Identities=17% Similarity=0.190 Sum_probs=83.3
Q ss_pred EEEEEcCChHHHHHHHHHHHc-CCeEE-EEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAF-GHHVT-VISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGP 264 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~-G~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~ 264 (360)
++.|+|+|.+|...+..++.. +++++ +.++++++.+.+.+++|...++. +.+.+.. ...+|+|+.|+....+...
T Consensus 4 rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~--~~~~ll~-~~~~D~V~i~tp~~~h~~~ 80 (344)
T 3ezy_A 4 RIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYK--DPHELIE-DPNVDAVLVCSSTNTHSEL 80 (344)
T ss_dssp EEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEES--SHHHHHH-CTTCCEEEECSCGGGHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeC--CHHHHhc-CCCCCEEEEcCCCcchHHH
Confidence 688999999998877766654 66766 56788888777777688654432 2222211 3579999999998877778
Q ss_pred HHHHhccCCEEEEeCCCCCCcccChh------hH-hccC-cEEEEeecCCHHHHHHHHHHHhcCCCcc
Q 018158 265 ILELLKVNGTLSVVGAPEAPFELPSF------PL-IFGK-RSVKGSMTGGMRETQEMMNVCGKYNITC 324 (360)
Q Consensus 265 ~~~~l~~~G~~v~~g~~~~~~~~~~~------~~-~~~~-~~i~~~~~~~~~~~~~~~~~l~~~~l~~ 324 (360)
+..+++.|..+ .+-.+ +..+.. .+ -.++ .-..++.......++.+.+++.+|.+-.
T Consensus 81 ~~~al~~gk~v-~~EKP---~~~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG~ 144 (344)
T 3ezy_A 81 VIACAKAKKHV-FCEKP---LSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVENGTIGK 144 (344)
T ss_dssp HHHHHHTTCEE-EEESC---SCSCHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHTTTTSS
T ss_pred HHHHHhcCCeE-EEECC---CCCCHHHHHHHHHHHHHhCCcEEEeecccCCHHHHHHHHHHHcCCCCC
Confidence 88888877554 44322 222221 11 1122 3334444444456788888899888744
|
| >2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1 | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0098 Score=50.08 Aligned_cols=96 Identities=18% Similarity=0.179 Sum_probs=66.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHc---CC-C--eEeeCccHHHHHhc---C--CCcC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAF--GHHVTVISTSPSKEKEAKELL---GA-D--EFILSTNAMQMQAG---K--RTLD 250 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~--G~~V~~~~~~~~~~~~~~~~~---g~-~--~~v~~~~~~~~~~~---~--~~~d 250 (360)
++++||-+|+| .|..++.+++.. +.+|++++.+++..+.+++.+ |. + .++..+..+..... + ..+|
T Consensus 69 ~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 69 QAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred CCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 78899999997 688888999876 568999999998888777643 43 1 22322222222222 1 6799
Q ss_pred EEEEcCCCc---ccHHHHHHHhccCCEEEEeCC
Q 018158 251 FILDTVSAK---HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 251 ~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~ 280 (360)
+|+...... ..+..+.+.|+++|.++....
T Consensus 148 ~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 148 VAVVDADKENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp EEEECSCSTTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEECCCHHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 998654332 347888899999999987643
|
| >1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0046 Score=55.29 Aligned_cols=89 Identities=15% Similarity=0.201 Sum_probs=65.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc--
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVIST-SPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH-- 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~-~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~-- 260 (360)
.|+++.|+|.|.+|...++.++..|++|++.++ +.++ ..+.+ +|... . .+. .+.-...|+|+.++....
T Consensus 145 ~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~-~g~~~-~--~~l---~ell~~aDvVil~~p~~~~t 216 (320)
T 1gdh_A 145 DNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASS-SDEAS-YQATF-H--DSL---DSLLSVSQFFSLNAPSTPET 216 (320)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCH-HHHHH-HTCEE-C--SSH---HHHHHHCSEEEECCCCCTTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcCh-hhhhh-cCcEE-c--CCH---HHHHhhCCEEEEeccCchHH
Confidence 688999999999999999999999999999998 7765 34555 67632 1 122 122346899999887432
Q ss_pred --cH-HHHHHHhccCCEEEEeCC
Q 018158 261 --SL-GPILELLKVNGTLSVVGA 280 (360)
Q Consensus 261 --~~-~~~~~~l~~~G~~v~~g~ 280 (360)
.+ ...+..|+++..+++++.
T Consensus 217 ~~~i~~~~l~~mk~gailIn~ar 239 (320)
T 1gdh_A 217 RYFFNKATIKSLPQGAIVVNTAR 239 (320)
T ss_dssp TTCBSHHHHTTSCTTEEEEECSC
T ss_pred HhhcCHHHHhhCCCCcEEEECCC
Confidence 22 456788999988888875
|
| >4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.042 Score=50.19 Aligned_cols=133 Identities=11% Similarity=0.038 Sum_probs=79.6
Q ss_pred cEEEEEcCChHHHHHHHHHHH--------cCCeEEE-EeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcC
Q 018158 186 KRIGIVGLGGLGHVAVKFGKA--------FGHHVTV-ISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~--------~G~~V~~-~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
=+|.|+|+|.+|..-+...+. -+++|++ .++++++.+.+.+++|...++. +.+.+- ....+|+|+-|+
T Consensus 26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~--d~~ell-~~~~iDaV~Iat 102 (393)
T 4fb5_A 26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATA--DWRALI-ADPEVDVVSVTT 102 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEES--CHHHHH-HCTTCCEEEECS
T ss_pred ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecC--CHHHHh-cCCCCcEEEECC
Confidence 468999999999765444332 2567554 5567777777777799765542 222221 145799999999
Q ss_pred CCcccHHHHHHHhccCCEEEEeCCCCCCcccChhh------H-hccCc-EEEEeecCCHHHHHHHHHHHhcCCCccc
Q 018158 257 SAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFP------L-IFGKR-SVKGSMTGGMRETQEMMNVCGKYNITCN 325 (360)
Q Consensus 257 g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~------~-~~~~~-~i~~~~~~~~~~~~~~~~~l~~~~l~~~ 325 (360)
....+...+..+++.| +-|.+-. ++..+... + -.+++ ...+........++.+.+++.+|.+-.+
T Consensus 103 P~~~H~~~a~~al~aG-khVl~EK---Pla~~~~ea~~l~~~a~~~g~~l~vg~~~R~~p~~~~~k~~i~~G~iG~i 175 (393)
T 4fb5_A 103 PNQFHAEMAIAALEAG-KHVWCEK---PMAPAYADAERMLATAERSGKVAALGYNYIQNPVMRHIRKLVGDGVIGRV 175 (393)
T ss_dssp CGGGHHHHHHHHHHTT-CEEEECS---CSCSSHHHHHHHHHHHHHSSSCEEECCGGGGCHHHHHHHHHHHTTTTCSE
T ss_pred ChHHHHHHHHHHHhcC-CeEEEcc---CCcccHHHHHHhhhhHHhcCCccccccccccChHHHHHHHHHHcCCCccc
Confidence 9888888888888876 5556633 33333221 1 11222 2233333333456777777777777443
|
| >2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0058 Score=54.92 Aligned_cols=86 Identities=21% Similarity=0.266 Sum_probs=62.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCc----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAK---- 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~---- 259 (360)
.|+++.|+|.|.+|...++.++..|++|++.+++.++ +.+.+ +|... .+.+ +.-...|+|+.++...
T Consensus 145 ~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~-~g~~~----~~l~---e~l~~aDiVil~vp~~~~t~ 215 (333)
T 2d0i_A 145 YGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKE-LKARY----MDID---ELLEKSDIVILALPLTRDTY 215 (333)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHH-HTEEE----CCHH---HHHHHCSEEEECCCCCTTTT
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhhh-cCcee----cCHH---HHHhhCCEEEEcCCCChHHH
Confidence 5889999999999999999999999999999998876 54545 66421 1221 1223578998888754
Q ss_pred ccH-HHHHHHhccCCEEEEeC
Q 018158 260 HSL-GPILELLKVNGTLSVVG 279 (360)
Q Consensus 260 ~~~-~~~~~~l~~~G~~v~~g 279 (360)
..+ ...+..|+++ .+++++
T Consensus 216 ~~i~~~~~~~mk~g-ilin~s 235 (333)
T 2d0i_A 216 HIINEERVKKLEGK-YLVNIG 235 (333)
T ss_dssp TSBCHHHHHHTBTC-EEEECS
T ss_pred HHhCHHHHhhCCCC-EEEECC
Confidence 122 3456788888 777776
|
| >1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A* | Back alignment and structure |
|---|
Probab=96.52 E-value=0.01 Score=48.06 Aligned_cols=94 Identities=19% Similarity=0.200 Sum_probs=64.4
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCC-C--eEeeCccHHHHHhcCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGA-D--EFILSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~-~--~~v~~~~~~~~~~~~~~~d~vid~ 255 (360)
..++++||-+|+|. |..+..+++.. .+|++++.+++..+.+++. .+. . .++..+-.+.... ...+|+|+..
T Consensus 31 ~~~~~~vldiG~G~-G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~D~v~~~ 107 (192)
T 1l3i_A 31 PGKNDVAVDVGCGT-GGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCK-IPDIDIAVVG 107 (192)
T ss_dssp CCTTCEEEEESCTT-SHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTT-SCCEEEEEES
T ss_pred CCCCCEEEEECCCC-CHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhccc-CCCCCEEEEC
Confidence 34899999999976 88888888876 8999999999888877764 333 1 2222221111111 2479999965
Q ss_pred CCC---cccHHHHHHHhccCCEEEEe
Q 018158 256 VSA---KHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 256 ~g~---~~~~~~~~~~l~~~G~~v~~ 278 (360)
... ...+..+.+.++++|.++..
T Consensus 108 ~~~~~~~~~l~~~~~~l~~gG~l~~~ 133 (192)
T 1l3i_A 108 GSGGELQEILRIIKDKLKPGGRIIVT 133 (192)
T ss_dssp CCTTCHHHHHHHHHHTEEEEEEEEEE
T ss_pred CchHHHHHHHHHHHHhcCCCcEEEEE
Confidence 432 23467788889999998775
|
| >3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0062 Score=51.83 Aligned_cols=95 Identities=19% Similarity=0.121 Sum_probs=65.6
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC---CCeEeeCccHHHH-Hhc-CCCcCEE-EEcC
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG---ADEFILSTNAMQM-QAG-KRTLDFI-LDTV 256 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g---~~~~v~~~~~~~~-~~~-~~~~d~v-id~~ 256 (360)
.+|.+||-+|+| .|..+..+++..+.+|++++.+++-++.++++.. ....+...+.... ... ...||.| +|+.
T Consensus 59 ~~G~rVLdiG~G-~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~ 137 (236)
T 3orh_A 59 SKGGRVLEVGFG-MAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTCEEEEEECCT-TSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred cCCCeEEEECCC-ccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeee
Confidence 389999999997 4788888888777789999999998888887432 2222222222222 222 4568988 4655
Q ss_pred CCc----------ccHHHHHHHhccCCEEEEe
Q 018158 257 SAK----------HSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 257 g~~----------~~~~~~~~~l~~~G~~v~~ 278 (360)
... ..+.++.+.|++||+++.+
T Consensus 138 ~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred ecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 422 2356788999999999875
|
| >1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A | Back alignment and structure |
|---|
Probab=96.52 E-value=0.015 Score=48.88 Aligned_cols=96 Identities=20% Similarity=0.188 Sum_probs=64.3
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHcCC---CeEeeC--ccHHHHHhcCCCcCEEEE
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFG--HHVTVISTSPSKEKEAKELLGA---DEFILS--TNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G--~~V~~~~~~~~~~~~~~~~~g~---~~~v~~--~~~~~~~~~~~~~d~vid 254 (360)
++++++||-+|+|. |..+..+++..| .+|++++.+++..+.+++.... ..++.. .+..........+|+|+.
T Consensus 71 ~~~~~~vLDlG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~ 149 (227)
T 1g8a_A 71 IKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFE 149 (227)
T ss_dssp CCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCCEEEEEeccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEE
Confidence 45899999999975 888888888864 5899999999766666553321 122221 111111122457999996
Q ss_pred cCCCc----ccHHHHHHHhccCCEEEEe
Q 018158 255 TVSAK----HSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 255 ~~g~~----~~~~~~~~~l~~~G~~v~~ 278 (360)
..... ..+..+.+.|+++|.++..
T Consensus 150 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 150 DVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 55433 2267888999999999877
|
| >1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=96.51 E-value=0.009 Score=52.06 Aligned_cols=96 Identities=15% Similarity=0.162 Sum_probs=67.3
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHc----CCCeE-eeCccHHHHHhcCCCcCEEEE
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAF--GHHVTVISTSPSKEKEAKELL----GADEF-ILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~--G~~V~~~~~~~~~~~~~~~~~----g~~~~-v~~~~~~~~~~~~~~~d~vid 254 (360)
++++++||-+|+| .|..+..+++.. +.+|++++.+++..+.+++.+ |.+.+ +...+... ......+|+|+.
T Consensus 108 ~~~~~~VLD~G~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~ 185 (275)
T 1yb2_A 108 LRPGMDILEVGVG-SGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAVIA 185 (275)
T ss_dssp CCTTCEEEEECCT-TSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEEEE
T ss_pred CCCcCEEEEecCC-CCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEEEE
Confidence 4489999999987 477778888874 679999999999888887753 53222 11112111 111356999997
Q ss_pred cCCCc-ccHHHHHHHhccCCEEEEeC
Q 018158 255 TVSAK-HSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 255 ~~g~~-~~~~~~~~~l~~~G~~v~~g 279 (360)
..... ..+..+.+.|+++|+++...
T Consensus 186 ~~~~~~~~l~~~~~~LkpgG~l~i~~ 211 (275)
T 1yb2_A 186 DIPDPWNHVQKIASMMKPGSVATFYL 211 (275)
T ss_dssp CCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred cCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence 55443 46789999999999998774
|
| >2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0048 Score=50.88 Aligned_cols=96 Identities=19% Similarity=0.188 Sum_probs=63.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeEeeCccHHHHHhcCCCcCEEEEcCCCc-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEFILSTNAMQMQAGKRTLDFILDTVSAK- 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~- 259 (360)
++ +||-+|+|. |..+..+++. |.+|++++.+++..+.+++++ +....+...+..........+|+|+.+....
T Consensus 30 ~~-~vLdiGcG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 106 (202)
T 2kw5_A 30 QG-KILCLAEGE-GRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIFCHLP 106 (202)
T ss_dssp SS-EEEECCCSC-THHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECCCCC
T ss_pred CC-CEEEECCCC-CHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEhhcCC
Confidence 67 899999865 7777777775 889999999999888877743 3221222222211111235799999754321
Q ss_pred -----ccHHHHHHHhccCCEEEEeCCCC
Q 018158 260 -----HSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 260 -----~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
..+..+.+.|+++|.++......
T Consensus 107 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 107 SSLRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 23577788899999998775443
|
| >2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0053 Score=55.56 Aligned_cols=90 Identities=17% Similarity=0.262 Sum_probs=65.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHH-HcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc--
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGK-AFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH-- 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~-~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~-- 260 (360)
.|+++.|+|.|.+|...++.++ ..|++|++.+++.++.+.+.+ +|...+ .+.+ +.-...|+|+.++....
T Consensus 162 ~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~-~g~~~~---~~l~---ell~~aDvVil~vp~~~~t 234 (348)
T 2w2k_A 162 RGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKA-LGAERV---DSLE---ELARRSDCVSVSVPYMKLT 234 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHH-HTCEEC---SSHH---HHHHHCSEEEECCCCSGGG
T ss_pred CCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhh-cCcEEe---CCHH---HHhccCCEEEEeCCCChHH
Confidence 6889999999999999999999 999999999998776666655 675422 1221 12235899998886432
Q ss_pred --cH-HHHHHHhccCCEEEEeCC
Q 018158 261 --SL-GPILELLKVNGTLSVVGA 280 (360)
Q Consensus 261 --~~-~~~~~~l~~~G~~v~~g~ 280 (360)
.+ ...+..|+++..+++++.
T Consensus 235 ~~li~~~~l~~mk~gailin~sr 257 (348)
T 2w2k_A 235 HHLIDEAFFAAMKPGSRIVNTAR 257 (348)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSC
T ss_pred HHHhhHHHHhcCCCCCEEEECCC
Confidence 12 456788888888877764
|
| >1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0065 Score=54.05 Aligned_cols=90 Identities=14% Similarity=0.139 Sum_probs=61.4
Q ss_pred cEEEEEcCChHHHHHHHHHHH--cCCeE-EEEeCChhH--HHHHHHHcCCCeEeeCccHHHHHhc--CCCcCEEEEcCCC
Q 018158 186 KRIGIVGLGGLGHVAVKFGKA--FGHHV-TVISTSPSK--EKEAKELLGADEFILSTNAMQMQAG--KRTLDFILDTVSA 258 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~--~G~~V-~~~~~~~~~--~~~~~~~~g~~~~v~~~~~~~~~~~--~~~~d~vid~~g~ 258 (360)
-+|.|+|+|.+|...+..+.. .+.++ .++++++++ ++.+++ +|.... ..+.+.+... ..++|+||++++.
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~-~g~~~~--~~~~e~ll~~~~~~~iDvV~~atp~ 81 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQR-MGVTTT--YAGVEGLIKLPEFADIDFVFDATSA 81 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHH-TTCCEE--SSHHHHHHHSGGGGGEEEEEECSCH
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHH-cCCCcc--cCCHHHHHhccCCCCCcEEEECCCh
Confidence 578999999999988887743 46664 455666565 344445 886422 1222222221 3579999999997
Q ss_pred cccHHHHHHHhcc--CCEEEEe
Q 018158 259 KHSLGPILELLKV--NGTLSVV 278 (360)
Q Consensus 259 ~~~~~~~~~~l~~--~G~~v~~ 278 (360)
..+...+..+++. |.++++.
T Consensus 82 ~~h~~~a~~al~a~~Gk~Vi~e 103 (312)
T 1nvm_B 82 SAHVQNEALLRQAKPGIRLIDL 103 (312)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEC
T ss_pred HHHHHHHHHHHHhCCCCEEEEc
Confidence 7777888888888 8888774
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.48 E-value=0.01 Score=50.98 Aligned_cols=74 Identities=15% Similarity=0.178 Sum_probs=48.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEe-CChhHHHH----HHHHcCCCeE---eeCccHHHHHh-------cCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIS-TSPSKEKE----AKELLGADEF---ILSTNAMQMQA-------GKR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~-~~~~~~~~----~~~~~g~~~~---v~~~~~~~~~~-------~~~ 247 (360)
+++++||+|+ |++|..+++.+...|++|++++ ++.++... +++ .+.+.. .|-.+.+.... ...
T Consensus 12 ~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 90 (256)
T 3ezl_A 12 SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKA-LGFDFYASEGNVGDWDSTKQAFDKVKAEVG 90 (256)
T ss_dssp -CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-cCCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence 7899999999 9999999998888999999887 44443332 223 443222 23333322222 135
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|++|+++|.
T Consensus 91 ~id~lv~~Ag~ 101 (256)
T 3ezl_A 91 EIDVLVNNAGI 101 (256)
T ss_dssp CEEEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999884
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0017 Score=55.56 Aligned_cols=93 Identities=24% Similarity=0.231 Sum_probs=61.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE--eeCccHHHHHhc--------C-CCcCE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF--ILSTNAMQMQAG--------K-RTLDF 251 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~--v~~~~~~~~~~~--------~-~~~d~ 251 (360)
.++++||+|+ |++|..+++.+...|++|+++++++++.. +.... .|-.+.+..... + .++|+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~ 79 (241)
T 1dhr_A 6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA 79 (241)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence 6789999999 99999999999999999999998875422 10111 133333222211 1 58999
Q ss_pred EEEcCCCc-------c-------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 252 ILDTVSAK-------H-------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 252 vid~~g~~-------~-------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+|++.|.. . ..+.+...|+++|+++.++...
T Consensus 80 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~ 136 (241)
T 1dhr_A 80 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKA 136 (241)
T ss_dssp EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred EEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHH
Confidence 99999831 0 1233444555678999987643
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.003 Score=54.10 Aligned_cols=89 Identities=20% Similarity=0.177 Sum_probs=56.4
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhc----CCCcCEEEEcCCCcc
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAG----KRTLDFILDTVSAKH 260 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~----~~~~d~vid~~g~~~ 260 (360)
+++||+|+ |.+|..++..+...|++|++++++.++.+. ....|..+.+..... ..++|++|+++|...
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~ 74 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVGV 74 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCCT
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------cccCCcccHHHHHHHHHHcCCCccEEEECCCCCC
Confidence 46899999 999999999888899999999987653210 101121222222221 258999999987432
Q ss_pred ------------------cHHHHHHHhcc--CCEEEEeCCC
Q 018158 261 ------------------SLGPILELLKV--NGTLSVVGAP 281 (360)
Q Consensus 261 ------------------~~~~~~~~l~~--~G~~v~~g~~ 281 (360)
.++.+...++. .++++.++..
T Consensus 75 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~ 115 (255)
T 2dkn_A 75 TAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSI 115 (255)
T ss_dssp TSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred cchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecc
Confidence 12333334433 3899988764
|
| >1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0034 Score=56.90 Aligned_cols=113 Identities=12% Similarity=0.115 Sum_probs=71.3
Q ss_pred hhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCC----hhH----HHHHHHHcCCCeEeeCc
Q 018158 167 GITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTS----PSK----EKEAKELLGADEFILST 237 (360)
Q Consensus 167 ~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~----~~~----~~~~~~~~g~~~~v~~~ 237 (360)
...-+.+++..+.-- ++.+|+|+|+|..|..+++++..+|+ +|++++++ .+| ++..++.|..+.- ...
T Consensus 176 lAal~~A~~i~g~~l--~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~-~~~ 252 (388)
T 1vl6_A 176 SAAFLNALKLTEKKI--EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITN-PER 252 (388)
T ss_dssp HHHHHHHHHHHTCCT--TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSC-TTC
T ss_pred HHHHHHHHHHhCCCC--CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhh-ccC
Confidence 333345555444222 67899999999999999999999999 79999988 554 3333332321100 011
Q ss_pred cHHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 238 NAMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 238 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
....+.+.-+++|++|-+++....-++.++.|+++-.+..+..+.
T Consensus 253 ~~~~L~eav~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSNPt 297 (388)
T 1vl6_A 253 LSGDLETALEGADFFIGVSRGNILKPEWIKKMSRKPVIFALANPV 297 (388)
T ss_dssp CCSCHHHHHTTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCSSS
T ss_pred chhhHHHHHccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCCCC
Confidence 112233344668999998874333467888898876665555443
|
| >3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=96.46 E-value=0.02 Score=48.11 Aligned_cols=96 Identities=19% Similarity=0.249 Sum_probs=65.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHc---CCC--eE--eeCccHHHHHhc-CCCcCEEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAF--GHHVTVISTSPSKEKEAKELL---GAD--EF--ILSTNAMQMQAG-KRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~--G~~V~~~~~~~~~~~~~~~~~---g~~--~~--v~~~~~~~~~~~-~~~~d~vi 253 (360)
++.+||-+|+| .|..++.+++.+ +.+|+.++.+++..+.+++.+ |.. .+ +..+..+..... ...||+||
T Consensus 56 ~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~ 134 (221)
T 3dr5_A 56 GSTGAIAITPA-AGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVF 134 (221)
T ss_dssp TCCEEEEESTT-HHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEE
T ss_pred CCCCEEEEcCC-chHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEE
Confidence 45589988986 488888888876 679999999999887776643 432 12 222222222333 46799998
Q ss_pred EcCCCc---ccHHHHHHHhccCCEEEEeCC
Q 018158 254 DTVSAK---HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 254 d~~g~~---~~~~~~~~~l~~~G~~v~~g~ 280 (360)
-..... ..+..+.+.|++||.++.-..
T Consensus 135 ~d~~~~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 135 GQVSPMDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp ECCCTTTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred EcCcHHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 644322 246788899999999987543
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0064 Score=54.10 Aligned_cols=89 Identities=19% Similarity=0.174 Sum_probs=62.7
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHH
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGP 264 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~ 264 (360)
-.+|.|+|.|.+|...++.+...|.+|++.++++++.+.+.+ .|.... .+. .+.-...|+||.|++....+..
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~-~g~~~~---~~~---~~~~~~aDvvi~~vp~~~~~~~ 93 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVE-HGASVC---ESP---AEVIKKCKYTIAMLSDPCAALS 93 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH-TTCEEC---SSH---HHHHHHCSEEEECCSSHHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-CCCeEc---CCH---HHHHHhCCEEEEEcCCHHHHHH
Confidence 357999999999999999998999999999999999888887 775321 111 1122347888888876544444
Q ss_pred HH-------HHhccCCEEEEeCC
Q 018158 265 IL-------ELLKVNGTLSVVGA 280 (360)
Q Consensus 265 ~~-------~~l~~~G~~v~~g~ 280 (360)
++ ..++++..+++.+.
T Consensus 94 v~~~~~~l~~~l~~g~~vv~~st 116 (310)
T 3doj_A 94 VVFDKGGVLEQICEGKGYIDMST 116 (310)
T ss_dssp HHHSTTCGGGGCCTTCEEEECSC
T ss_pred HHhCchhhhhccCCCCEEEECCC
Confidence 44 34455666666653
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0013 Score=56.03 Aligned_cols=93 Identities=20% Similarity=0.187 Sum_probs=61.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE--eeCccHHHHHhc--------C-CCcCE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF--ILSTNAMQMQAG--------K-RTLDF 251 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~--v~~~~~~~~~~~--------~-~~~d~ 251 (360)
.++++||+|+ |++|.++++.+...|++|+++++++++.. +.... .|-.+.+..... + .++|+
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~ 75 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDG 75 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence 3678999999 99999999999999999999998876422 10111 122222222111 1 58999
Q ss_pred EEEcCCCc-------c-------------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 252 ILDTVSAK-------H-------------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 252 vid~~g~~-------~-------------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+|++.|.. . ..+.+...|+++|+++.++...
T Consensus 76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~ 132 (236)
T 1ooe_A 76 VFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAA 132 (236)
T ss_dssp EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred EEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchh
Confidence 99999831 0 0234445555678999987643
|
| >3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=96.46 E-value=0.01 Score=47.30 Aligned_cols=94 Identities=20% Similarity=0.182 Sum_probs=67.4
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCc--
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAK-- 259 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~-- 259 (360)
++++.+||-+|+|. |..+..+++... +|++++.+++..+.++++.....++..+ .......+|+|+....-.
T Consensus 15 ~~~~~~vLDiG~G~-G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~v~~~~~d----~~~~~~~~D~v~~~~~l~~~ 88 (170)
T 3i9f_A 15 EGKKGVIVDYGCGN-GFYCKYLLEFAT-KLYCIDINVIALKEVKEKFDSVITLSDP----KEIPDNSVDFILFANSFHDM 88 (170)
T ss_dssp SSCCEEEEEETCTT-CTTHHHHHTTEE-EEEEECSCHHHHHHHHHHCTTSEEESSG----GGSCTTCEEEEEEESCSTTC
T ss_pred cCCCCeEEEECCCC-CHHHHHHHhhcC-eEEEEeCCHHHHHHHHHhCCCcEEEeCC----CCCCCCceEEEEEccchhcc
Confidence 34889999999964 777778887765 9999999999999998853333333322 222246799999655422
Q ss_pred ----ccHHHHHHHhccCCEEEEeCCC
Q 018158 260 ----HSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 260 ----~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
..+..+.+.|+++|+++.....
T Consensus 89 ~~~~~~l~~~~~~L~pgG~l~~~~~~ 114 (170)
T 3i9f_A 89 DDKQHVISEVKRILKDDGRVIIIDWR 114 (170)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCHHHHHHHHHHhcCCCCEEEEEEcC
Confidence 2468899999999999887543
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=96.45 E-value=0.014 Score=52.78 Aligned_cols=96 Identities=20% Similarity=0.193 Sum_probs=62.9
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHH--HHHHHHc-CCCeE-ee-CccHHHHHhcCCCcCEEEEcCCC
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKE--KEAKELL-GADEF-IL-STNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~--~~~~~~~-g~~~~-v~-~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
+++++|+|+ |.+|..+++.+...|.+|++++++.++. +.+.+ . +...+ .| ..+.+.+...-.++|+||.+.+.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~-~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~ 83 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQA-IPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 83 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHT-STTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhh-cCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence 567999999 9999999988888899999999887654 23322 2 22211 24 44555555555689999977754
Q ss_pred c-----ccHHHHHHHhcc-C--CEEEEeCCC
Q 018158 259 K-----HSLGPILELLKV-N--GTLSVVGAP 281 (360)
Q Consensus 259 ~-----~~~~~~~~~l~~-~--G~~v~~g~~ 281 (360)
. .....+++.++. + ++++.++..
T Consensus 84 ~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~ 114 (352)
T 1xgk_A 84 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMP 114 (352)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred CCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence 2 111344444443 3 588888654
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0094 Score=51.78 Aligned_cols=75 Identities=16% Similarity=0.190 Sum_probs=51.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTS-PSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~-~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|.++++.+...|++|++++++ .+..+.+.+. .+.... .|..+.+..... ..+
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 107 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGG 107 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 5789999999 999999999888999999999984 4443333322 343322 233333322221 358
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|+++|.
T Consensus 108 id~li~nAg~ 117 (271)
T 4iin_A 108 LSYLVNNAGV 117 (271)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999999984
|
| >1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0042 Score=55.61 Aligned_cols=93 Identities=13% Similarity=0.178 Sum_probs=65.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHH-cCC-eEEEEeCChhHHHHHHHHcCCC--eEeeCccHHHHHhcCCCcCEEEEcCCCc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKA-FGH-HVTVISTSPSKEKEAKELLGAD--EFILSTNAMQMQAGKRTLDFILDTVSAK 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~-~G~-~V~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~~~~~~~~~~d~vid~~g~~ 259 (360)
...++.|+|+|.+|...++.+.. .+. +|.+.+++.++.+.+.++++.. .+. ..+. .+.- ++|+|+.|+...
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~-~~~~---~e~v-~aDvVi~aTp~~ 198 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-VQPA---EEAS-RCDVLVTTTPSR 198 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-ECCH---HHHT-SSSEEEECCCCS
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE-ECCH---HHHh-CCCEEEEeeCCC
Confidence 57899999999999987776665 455 6999999999888877755421 122 2222 2334 799999999865
Q ss_pred ccHHHHHHHhccCCEEEEeCCCC
Q 018158 260 HSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 260 ~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
..+-. ..+++++.++..+|.+.
T Consensus 199 ~pv~~-~~~l~~G~~V~~ig~~~ 220 (322)
T 1omo_A 199 KPVVK-AEWVEEGTHINAIGADG 220 (322)
T ss_dssp SCCBC-GGGCCTTCEEEECSCCS
T ss_pred Cceec-HHHcCCCeEEEECCCCC
Confidence 32111 25788888888898765
|
| >4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.44 E-value=0.041 Score=49.59 Aligned_cols=133 Identities=14% Similarity=0.055 Sum_probs=83.2
Q ss_pred EEEEEcCChHHHH-HHHHHHHc-CCeEE-EEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 187 RIGIVGLGGLGHV-AVKFGKAF-GHHVT-VISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 187 ~vlI~Gag~vG~~-aiqla~~~-G~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
++-|+|+|.+|.. .+...+.. +++|+ +.++++++.+.+.+++|...++. +.+.+- ....+|+|+-|+.......
T Consensus 25 rigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~--d~~ell-~~~~iDaV~I~tP~~~H~~ 101 (350)
T 4had_A 25 RFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFG--SYEEML-ASDVIDAVYIPLPTSQHIE 101 (350)
T ss_dssp EEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEES--SHHHHH-HCSSCSEEEECSCGGGHHH
T ss_pred EEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeC--CHHHHh-cCCCCCEEEEeCCCchhHH
Confidence 6889999999974 35555554 67866 45677788777777799765543 222221 1467999999999888888
Q ss_pred HHHHHhccCCEEEEeCCCCCCcccChhhH----hccCc-EEEEeecCCHHHHHHHHHHHhcCCCc
Q 018158 264 PILELLKVNGTLSVVGAPEAPFELPSFPL----IFGKR-SVKGSMTGGMRETQEMMNVCGKYNIT 323 (360)
Q Consensus 264 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~----~~~~~-~i~~~~~~~~~~~~~~~~~l~~~~l~ 323 (360)
.+..+++.| +-|.+-.+.....-....+ -.+++ -..+........++.+.+++.+|.+=
T Consensus 102 ~~~~al~aG-khVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~~k~~i~~G~iG 165 (350)
T 4had_A 102 WSIKAADAG-KHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAYMITYSPVWQKVRSLIDEGAIG 165 (350)
T ss_dssp HHHHHHHTT-CEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTTTTS
T ss_pred HHHHHHhcC-CEEEEeCCcccchhhHHHHHHHHHHcCCceeEeeeeecCHHHHHhhHhhhcCCCC
Confidence 888888876 5556644321111111111 11233 33344333345678888888988873
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0057 Score=54.93 Aligned_cols=89 Identities=20% Similarity=0.295 Sum_probs=65.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCc----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAK---- 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~---- 259 (360)
.|+++.|+|.|.+|...++.++..|.+|++.+++.++.+.+.+ +|.... +.+ +.-...|+|+.++...
T Consensus 154 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-~g~~~~----~l~---e~l~~aDvVi~~vp~~~~t~ 225 (330)
T 2gcg_A 154 TQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAE-FQAEFV----STP---ELAAQSDFIVVACSLTPATE 225 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHT-TTCEEC----CHH---HHHHHCSEEEECCCCCTTTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHh-cCceeC----CHH---HHHhhCCEEEEeCCCChHHH
Confidence 5789999999999999999999999999999988766555555 664322 221 1223689999988643
Q ss_pred ccH-HHHHHHhccCCEEEEeCC
Q 018158 260 HSL-GPILELLKVNGTLSVVGA 280 (360)
Q Consensus 260 ~~~-~~~~~~l~~~G~~v~~g~ 280 (360)
..+ ...+..|+++..+++++.
T Consensus 226 ~~i~~~~~~~mk~gailIn~sr 247 (330)
T 2gcg_A 226 GLCNKDFFQKMKETAVFINISR 247 (330)
T ss_dssp TCBSHHHHHHSCTTCEEEECSC
T ss_pred HhhCHHHHhcCCCCcEEEECCC
Confidence 122 466788888888887764
|
| >3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.028 Score=48.49 Aligned_cols=94 Identities=18% Similarity=0.164 Sum_probs=64.0
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-eEeeCccHHH--HHhcCCCcCEEEEcCCC
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-EFILSTNAMQ--MQAGKRTLDFILDTVSA 258 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~--~~~~~~~~d~vid~~g~ 258 (360)
+.++.+||=+|+|. |..++.+++. |++|++++.+++-++.+++++... ...+..+... .......+|+|+....-
T Consensus 43 l~~g~~VLDlGcGt-G~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l 120 (261)
T 3iv6_A 43 IVPGSTVAVIGAST-RFLIEKALER-GASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVLNDRLI 120 (261)
T ss_dssp CCTTCEEEEECTTC-HHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEEEESCG
T ss_pred CCCcCEEEEEeCcc-hHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEEEEhhhh
Confidence 44899999999964 7778888875 889999999999999999865532 1111111111 01224679999975431
Q ss_pred --------cccHHHHHHHhccCCEEEEe
Q 018158 259 --------KHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 259 --------~~~~~~~~~~l~~~G~~v~~ 278 (360)
...+..+.+.+ +||+++..
T Consensus 121 ~~~~~~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 121 NRFTTEEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp GGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred HhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence 12466777888 99998754
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0014 Score=57.22 Aligned_cols=91 Identities=19% Similarity=0.115 Sum_probs=59.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
.+++++|+|+|++|.+++..+...|+ +|+++.|+.++.+.+.+.+ .... .+.....-..+|+||+|++....
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~---~~~~---~~~~~~~~~~aDiVInaTp~Gm~- 188 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNI---NKIN---LSHAESHLDEFDIIINTTPAGMN- 188 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCC---EEEC---HHHHHHTGGGCSEEEECCC-----
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhc---cccc---HhhHHHHhcCCCEEEECccCCCC-
Confidence 57899999999999999999999999 8999999987755433211 1111 22233334579999999875311
Q ss_pred HH-----HHHHhccCCEEEEeCCC
Q 018158 263 GP-----ILELLKVNGTLSVVGAP 281 (360)
Q Consensus 263 ~~-----~~~~l~~~G~~v~~g~~ 281 (360)
.. -...++++..++++-..
T Consensus 189 ~~~~~~l~~~~l~~~~~V~D~vY~ 212 (277)
T 3don_A 189 GNTDSVISLNRLASHTLVSDIVYN 212 (277)
T ss_dssp ---CCSSCCTTCCSSCEEEESCCS
T ss_pred CCCcCCCCHHHcCCCCEEEEecCC
Confidence 11 12446667667776544
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0033 Score=55.33 Aligned_cols=93 Identities=12% Similarity=0.071 Sum_probs=62.8
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC---e---EeeCccHHHHHhcCCCcCEEEEcCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD---E---FILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~---~---~v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
.+++++|+|+|++|.+++..+...| +|++++++.++.+.+.+.++.. . .++..+ ..+.-.++|++++++|
T Consensus 127 ~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~---~~~~~~~~DilVn~ag 202 (287)
T 1nvt_A 127 KDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG---LDVDLDGVDIIINATP 202 (287)
T ss_dssp CSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC---TTCCCTTCCEEEECSC
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEee---HHHhhCCCCEEEECCC
Confidence 5789999999999999999999999 9999999988877665544320 0 011111 1223467999999998
Q ss_pred CcccH-----HH-HHHHhccCCEEEEeCC
Q 018158 258 AKHSL-----GP-ILELLKVNGTLSVVGA 280 (360)
Q Consensus 258 ~~~~~-----~~-~~~~l~~~G~~v~~g~ 280 (360)
....- .. ....++++..++++..
T Consensus 203 ~~~~~~~~~~~~~~~~~l~~~~~v~Dv~y 231 (287)
T 1nvt_A 203 IGMYPNIDVEPIVKAEKLREDMVVMDLIY 231 (287)
T ss_dssp TTCTTCCSSCCSSCSTTCCSSSEEEECCC
T ss_pred CCCCCCCCCCCCCCHHHcCCCCEEEEeee
Confidence 54210 00 1345667777777765
|
| >1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5 | Back alignment and structure |
|---|
Probab=96.43 E-value=0.019 Score=51.23 Aligned_cols=128 Identities=9% Similarity=0.069 Sum_probs=80.1
Q ss_pred EEEEEcCChHHH-HHHHHHHHc-CCeEEEEeCChhHHHHHHHHcCCCe-EeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 187 RIGIVGLGGLGH-VAVKFGKAF-GHHVTVISTSPSKEKEAKELLGADE-FILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 187 ~vlI~Gag~vG~-~aiqla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
++.|+|+|.+|. ..+..++.. ++++++.++++++.+.+.+++|... ..++.+ .+ ...+|+|+.|+.......
T Consensus 4 ~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~--~l---~~~~D~V~i~tp~~~h~~ 78 (323)
T 1xea_A 4 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRD--VL---QYGVDAVMIHAATDVHST 78 (323)
T ss_dssp EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTG--GG---GGCCSEEEECSCGGGHHH
T ss_pred EEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHH--Hh---hcCCCEEEEECCchhHHH
Confidence 588999999997 466655554 6787788888888887777688653 222221 11 357999999999877667
Q ss_pred HHHHHhccCCEEEEeCCCCCCcccChh------hH-hccCc-EEEEeecCCHHHHHHHHHHHhcCCCc
Q 018158 264 PILELLKVNGTLSVVGAPEAPFELPSF------PL-IFGKR-SVKGSMTGGMRETQEMMNVCGKYNIT 323 (360)
Q Consensus 264 ~~~~~l~~~G~~v~~g~~~~~~~~~~~------~~-~~~~~-~i~~~~~~~~~~~~~~~~~l~~~~l~ 323 (360)
.+..+++.|-.+ .+.. ++..+.. .+ -.+++ -..+........++.+.+++.+|.+-
T Consensus 79 ~~~~al~~Gk~V-~~EK---P~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG 142 (323)
T 1xea_A 79 LAAFFLHLGIPT-FVDK---PLAASAQECENLYELAEKHHQPLYVGFNRRHIPLYNQHLSELAQQECG 142 (323)
T ss_dssp HHHHHHHTTCCE-EEES---CSCSSHHHHHHHHHHHHHTTCCEEEECGGGCCHHHHHHCHHHHHTSCT
T ss_pred HHHHHHHCCCeE-EEeC---CCcCCHHHHHHHHHHHHhcCCeEEEeeccccCHHHHHHHHHHhcCCcC
Confidence 777888876444 3422 2222221 11 12233 33344444445577777888887763
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=96.39 E-value=0.012 Score=51.77 Aligned_cols=95 Identities=18% Similarity=0.122 Sum_probs=63.7
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcC-CeEEEEeCChhHH--HHHHHHcCCCeE-eeCccHHHHHhcCCCcCEEEEcCCCc
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFG-HHVTVISTSPSKE--KEAKELLGADEF-ILSTNAMQMQAGKRTLDFILDTVSAK 259 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G-~~V~~~~~~~~~~--~~~~~~~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g~~ 259 (360)
.++++|+|+ |.+|..+++.+...| .+|++++|++++. ..+.. .+.+.+ .|..+.+.+...-.++|+||.+.+..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~-~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~ 83 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRL-QGAEVVQGDQDDQVIMELALNGAYATFIVTNYW 83 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHH-TTCEEEECCTTCHHHHHHHHTTCSEEEECCCHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHH-CCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCC
Confidence 478999999 999999998888888 8999999987653 22333 454332 35555555555567899999998732
Q ss_pred c---------cHHHHHHHhccC--CEEEEeCC
Q 018158 260 H---------SLGPILELLKVN--GTLSVVGA 280 (360)
Q Consensus 260 ~---------~~~~~~~~l~~~--G~~v~~g~ 280 (360)
. ....+++.++.. ++++..+.
T Consensus 84 ~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~ 115 (299)
T 2wm3_A 84 ESCSQEQEVKQGKLLADLARRLGLHYVVYSGL 115 (299)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred ccccchHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 1 123444555432 57877543
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=96.38 E-value=0.013 Score=50.51 Aligned_cols=75 Identities=19% Similarity=0.239 Sum_probs=51.6
Q ss_pred CCcEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCChh---HHHHHHHHcCCCeE--eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL---GGLGHVAVKFGKAFGHHVTVISTSPS---KEKEAKELLGADEF--ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga---g~vG~~aiqla~~~G~~V~~~~~~~~---~~~~~~~~~g~~~~--v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|.++++.+...|++|++++++++ ..+.+.+..+.... .|-.+.+..... ..+
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG 86 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999987 59999999888888999999999875 34444443443222 244444333222 247
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|++.|.
T Consensus 87 iD~lv~~Ag~ 96 (261)
T 2wyu_A 87 LDYLVHAIAF 96 (261)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=96.38 E-value=0.006 Score=53.28 Aligned_cols=91 Identities=14% Similarity=0.127 Sum_probs=64.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL- 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~- 262 (360)
.+++++|+|+|.+|.+++..+...|++|++++++.++.+.+.+.+|.. +.+ + ..+.-..+|+|+.|++....-
T Consensus 128 ~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~-~~~--~---~~~~~~~aDiVi~atp~~~~~~ 201 (275)
T 2hk9_A 128 KEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLE-VVN--S---PEEVIDKVQVIVNTTSVGLKDE 201 (275)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEE-ECS--C---GGGTGGGCSEEEECSSTTSSTT
T ss_pred CCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCe-eeh--h---HHhhhcCCCEEEEeCCCCCCCC
Confidence 578999999999999999999989999999999998877666546632 211 1 122235799999999865310
Q ss_pred --HHH-HHHhccCCEEEEeCC
Q 018158 263 --GPI-LELLKVNGTLSVVGA 280 (360)
Q Consensus 263 --~~~-~~~l~~~G~~v~~g~ 280 (360)
..+ ...++++..+++++.
T Consensus 202 ~~~~i~~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 202 DPEIFNYDLIKKDHVVVDIIY 222 (275)
T ss_dssp CCCSSCGGGCCTTSEEEESSS
T ss_pred CCCCCCHHHcCCCCEEEEcCC
Confidence 011 245677777777765
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0093 Score=51.38 Aligned_cols=75 Identities=19% Similarity=0.173 Sum_probs=50.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHH----HHHHcCCCeE---eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKE----AKELLGADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~----~~~~~g~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
.++++||+|+ |++|..+++.+...|++|++++++.++... +.+..+.... .|..+.+..... ..+
T Consensus 13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 92 (265)
T 1h5q_A 13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP 92 (265)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 5788999999 999999999888899999999986544322 2221343321 244443332221 356
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++|+++|.
T Consensus 93 id~li~~Ag~ 102 (265)
T 1h5q_A 93 ISGLIANAGV 102 (265)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999999884
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=96.36 E-value=0.015 Score=51.55 Aligned_cols=91 Identities=24% Similarity=0.210 Sum_probs=62.0
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHH--HcCCCeE-eeCccHHHHHhcCCCcCEEEEcCCCc-
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPS-KEKEAKE--LLGADEF-ILSTNAMQMQAGKRTLDFILDTVSAK- 259 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~-~~~~~~~--~~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g~~- 259 (360)
++|+|+|+ |.+|..+++.+...|.+|++++|+.. +.+.+.+ ..|...+ .|..+.+.+...-+++|+||.+++..
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~~ 91 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFPQ 91 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGGG
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchhh
Confidence 47999999 99999999999989999999999874 3333221 1454322 35555555555567899999998743
Q ss_pred -ccHHHHHHHhccC---CEEE
Q 018158 260 -HSLGPILELLKVN---GTLS 276 (360)
Q Consensus 260 -~~~~~~~~~l~~~---G~~v 276 (360)
.....+++.++.. ++++
T Consensus 92 ~~~~~~l~~aa~~~g~v~~~v 112 (318)
T 2r6j_A 92 ILDQFKILEAIKVAGNIKRFL 112 (318)
T ss_dssp STTHHHHHHHHHHHCCCCEEE
T ss_pred hHHHHHHHHHHHhcCCCCEEE
Confidence 1234555655543 3665
|
| >2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.36 E-value=0.00099 Score=54.79 Aligned_cols=90 Identities=17% Similarity=0.103 Sum_probs=59.3
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcC----------CeEEEEeCChhHHHHHHHHcCCCeEe-e--CccHHHH----Hhc
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFG----------HHVTVISTSPSKEKEAKELLGADEFI-L--STNAMQM----QAG 245 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G----------~~V~~~~~~~~~~~~~~~~~g~~~~v-~--~~~~~~~----~~~ 245 (360)
+++++||.+|+|+ |..++.+++..| .+|++++.++... ......+ . ..+.... ...
T Consensus 21 ~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~ 93 (196)
T 2nyu_A 21 RPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP------LEGATFLCPADVTDPRTSQRILEVL 93 (196)
T ss_dssp CTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC------CTTCEEECSCCTTSHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc------CCCCeEEEeccCCCHHHHHHHHHhc
Confidence 4899999999987 999999999876 6899999887420 1111222 1 1111111 011
Q ss_pred -CCCcCEEEE-----cCCCc------------ccHHHHHHHhccCCEEEEeC
Q 018158 246 -KRTLDFILD-----TVSAK------------HSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 246 -~~~~d~vid-----~~g~~------------~~~~~~~~~l~~~G~~v~~g 279 (360)
...+|+|+. +++.. ..+..+.+.|+++|+++..-
T Consensus 94 ~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 94 PGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp GGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 357999994 33321 34677889999999998763
|
| >3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.04 Score=49.34 Aligned_cols=132 Identities=12% Similarity=0.023 Sum_probs=82.1
Q ss_pred cEEEEEcCChHHHHHHHHHHHc-CCeEE-EEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAF-GHHVT-VISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~-G~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
-++.|+|+|.+|...+..++.. +++++ +.+++.++.+.+.+++|...++ .+.+.+. ....+|+|+.|+.......
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~--~~~~~ll-~~~~~D~V~i~tp~~~h~~ 82 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAY--GSYEELC-KDETIDIIYIPTYNQGHYS 82 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCB--SSHHHHH-HCTTCSEEEECCCGGGHHH
T ss_pred EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCcee--CCHHHHh-cCCCCCEEEEcCCCHHHHH
Confidence 4688999999998877777765 66766 5567777777776668864332 2222221 1357999999999887778
Q ss_pred HHHHHhccCCEEEEeCCCCCCcccChh------hH-hccCcEE-EEeecCCHHHHHHHHHHHhcCCCcc
Q 018158 264 PILELLKVNGTLSVVGAPEAPFELPSF------PL-IFGKRSV-KGSMTGGMRETQEMMNVCGKYNITC 324 (360)
Q Consensus 264 ~~~~~l~~~G~~v~~g~~~~~~~~~~~------~~-~~~~~~i-~~~~~~~~~~~~~~~~~l~~~~l~~ 324 (360)
.+..+++.|.+ +.+-.+ +..+.. .+ -.+++.+ .++.......++.+.+++.+|.+-.
T Consensus 83 ~~~~al~~gk~-vl~EKP---~~~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~ 147 (330)
T 3e9m_A 83 AAKLALSQGKP-VLLEKP---FTLNAAEAEELFAIAQEQGVFLMEAQKSVFLPITQKVKATIQEGGLGE 147 (330)
T ss_dssp HHHHHHHTTCC-EEECSS---CCSSHHHHHHHHHHHHHTTCCEEECCSGGGCHHHHHHHHHHHTTTTCS
T ss_pred HHHHHHHCCCe-EEEeCC---CCCCHHHHHHHHHHHHHcCCeEEEEEhhhhCHHHHHHHHHHhCCCCCC
Confidence 88888887754 444332 222221 11 1223333 3333333355777888888887743
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0091 Score=51.49 Aligned_cols=86 Identities=19% Similarity=0.279 Sum_probs=63.1
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHHH
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPI 265 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 265 (360)
.++.|+|+|.+|...+..+...|.+|++.++++++.+.+.+.+|... ..+... .-...|+||.|+.. .....+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~~~~~~---~~~~~D~Vi~~v~~-~~~~~v 76 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY---AMSHQD---LIDQVDLVILGIKP-QLFETV 76 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB---CSSHHH---HHHTCSEEEECSCG-GGHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe---eCCHHH---HHhcCCEEEEEeCc-HhHHHH
Confidence 36899999999999888888889899999999998888776567542 222211 12368999999984 456677
Q ss_pred HHHhccCCEEEEe
Q 018158 266 LELLKVNGTLSVV 278 (360)
Q Consensus 266 ~~~l~~~G~~v~~ 278 (360)
+..++++..++..
T Consensus 77 ~~~l~~~~~vv~~ 89 (259)
T 2ahr_A 77 LKPLHFKQPIISM 89 (259)
T ss_dssp HTTSCCCSCEEEC
T ss_pred HHHhccCCEEEEe
Confidence 7767766656555
|
| >3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.01 Score=49.91 Aligned_cols=95 Identities=20% Similarity=0.277 Sum_probs=65.2
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC----------eEeeCccHHHHHhcCCCcCEE
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD----------EFILSTNAMQMQAGKRTLDFI 252 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~----------~~v~~~~~~~~~~~~~~~d~v 252 (360)
+++.+||-+|+|. |..+..+++. |.+|++++.+++..+.+++++... .++. .+..........+|+|
T Consensus 29 ~~~~~vLdiG~G~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~D~v 105 (235)
T 3sm3_A 29 QEDDEILDIGCGS-GKISLELASK-GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKV-ENASSLSFHDSSFDFA 105 (235)
T ss_dssp CTTCEEEEETCTT-SHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEE-CCTTSCCSCTTCEEEE
T ss_pred CCCCeEEEECCCC-CHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEE-ecccccCCCCCceeEE
Confidence 3889999999974 7777777777 889999999999988888854321 1111 1111111124679999
Q ss_pred EEcCC-----Cc----ccHHHHHHHhccCCEEEEeCC
Q 018158 253 LDTVS-----AK----HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 253 id~~g-----~~----~~~~~~~~~l~~~G~~v~~g~ 280 (360)
+.... .. ..+..+.+.|+++|+++....
T Consensus 106 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 106 VMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp EEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 86432 11 357888899999999987743
|
| >2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18 | Back alignment and structure |
|---|
Probab=96.34 E-value=0.011 Score=51.91 Aligned_cols=96 Identities=17% Similarity=0.271 Sum_probs=66.0
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC---eEeeCccHHHHHhcCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD---EFILSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~~~~~d~vid~ 255 (360)
+.++.+||-+|+| .|..+..+++..|++|++++.++..++.+++++ |.. .++.. +..........+|+|+..
T Consensus 80 ~~~~~~vLDiGcG-~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~fD~v~~~ 157 (297)
T 2o57_A 80 LQRQAKGLDLGAG-YGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYG-SFLEIPCEDNSYDFIWSQ 157 (297)
T ss_dssp CCTTCEEEEETCT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEEC-CTTSCSSCTTCEEEEEEE
T ss_pred CCCCCEEEEeCCC-CCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEc-CcccCCCCCCCEeEEEec
Confidence 3489999999996 477788888888999999999998877776642 321 22211 111111113579999865
Q ss_pred CCC------cccHHHHHHHhccCCEEEEeC
Q 018158 256 VSA------KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 256 ~g~------~~~~~~~~~~l~~~G~~v~~g 279 (360)
..- ...+..+.+.|++||+++...
T Consensus 158 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 158 DAFLHSPDKLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp SCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhhcCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 432 234788999999999998764
|
| >4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A* | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0063 Score=52.72 Aligned_cols=94 Identities=13% Similarity=0.178 Sum_probs=63.9
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHc---CCeEEEEeCChhHHHHHHHHc---CCC-e--EeeCccHHHHHhcCCCcCEE
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAF---GHHVTVISTSPSKEKEAKELL---GAD-E--FILSTNAMQMQAGKRTLDFI 252 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~---G~~V~~~~~~~~~~~~~~~~~---g~~-~--~v~~~~~~~~~~~~~~~d~v 252 (360)
+++|.+||-+|+|. |..+..+++.. |++|++++.+++-++.+++++ +.. . ++.. +... .....+|+|
T Consensus 68 ~~~~~~vLDlGcGt-G~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~-D~~~--~~~~~~d~v 143 (261)
T 4gek_A 68 VQPGTQVYDLGCSL-GAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEG-DIRD--IAIENASMV 143 (261)
T ss_dssp CCTTCEEEEETCTT-THHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CTTT--CCCCSEEEE
T ss_pred CCCCCEEEEEeCCC-CHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeec-cccc--ccccccccc
Confidence 34999999999963 77777777764 679999999999888887753 322 1 1211 1111 113568988
Q ss_pred EEcCCC--------cccHHHHHHHhccCCEEEEeC
Q 018158 253 LDTVSA--------KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 253 id~~g~--------~~~~~~~~~~l~~~G~~v~~g 279 (360)
+....- ...+..+.+.|++||.++..-
T Consensus 144 ~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 144 VLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEe
Confidence 764431 124788999999999998763
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0093 Score=51.39 Aligned_cols=75 Identities=16% Similarity=0.105 Sum_probs=51.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHH---cCCeEEEEeCChhHHHHHHHHc-----CCCeE---eeCccHHHHHh----c--
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKA---FGHHVTVISTSPSKEKEAKELL-----GADEF---ILSTNAMQMQA----G-- 245 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~---~G~~V~~~~~~~~~~~~~~~~~-----g~~~~---v~~~~~~~~~~----~-- 245 (360)
.++++||+|+ |++|.++++.+.. .|++|++++++.++.+.+.+.+ +.... .|-.+.+.... .
T Consensus 5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence 4788999999 9999988887776 8999999999988776655433 32211 24444332221 1
Q ss_pred ---CCCcC--EEEEcCCC
Q 018158 246 ---KRTLD--FILDTVSA 258 (360)
Q Consensus 246 ---~~~~d--~vid~~g~ 258 (360)
..++| +++++.|.
T Consensus 85 ~~~~g~~d~~~lvnnAg~ 102 (259)
T 1oaa_A 85 LPRPEGLQRLLLINNAAT 102 (259)
T ss_dssp SCCCTTCCEEEEEECCCC
T ss_pred ccccccCCccEEEECCcc
Confidence 13578 99998873
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0094 Score=54.24 Aligned_cols=75 Identities=20% Similarity=0.110 Sum_probs=52.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHcCCCeE-eeCc-cHHHHHhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKELLGADEF-ILST-NAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~-~~~~~~~~~~~~d~vid~~g~ 258 (360)
.+.+|||+|+ |.+|..+++.+... |.+|++++++.++...+...-+.+.+ .|.. +.+.....-.++|+||.+++.
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~ 101 (372)
T 3slg_A 23 KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVAI 101 (372)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCcc
Confidence 3578999999 99999999888887 89999999987765444331122222 2444 444444444589999998874
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=96.30 E-value=0.029 Score=52.63 Aligned_cols=75 Identities=15% Similarity=0.197 Sum_probs=50.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChh--HHHHHHHHcCCCeE-eeCccHHHHHh-------c-CCCcCE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPS--KEKEAKELLGADEF-ILSTNAMQMQA-------G-KRTLDF 251 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~--~~~~~~~~~g~~~~-v~~~~~~~~~~-------~-~~~~d~ 251 (360)
+++++||+|+ |++|..+++.+...|++|++++++.. +.....+..+...+ .|-.+.+.... . +..+|+
T Consensus 212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~ 291 (454)
T 3u0b_A 212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDI 291 (454)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSE
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceE
Confidence 5789999999 99999988888888999999988643 33333333554322 23333322211 1 335999
Q ss_pred EEEcCCC
Q 018158 252 ILDTVSA 258 (360)
Q Consensus 252 vid~~g~ 258 (360)
+|++.|.
T Consensus 292 lV~nAGv 298 (454)
T 3u0b_A 292 LVNNAGI 298 (454)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 9999984
|
| >3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.022 Score=47.39 Aligned_cols=92 Identities=21% Similarity=0.199 Sum_probs=64.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC-CCeEeeCccHHHHHhcCCCcCEEEEcCCCc---
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG-ADEFILSTNAMQMQAGKRTLDFILDTVSAK--- 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~d~vid~~g~~--- 259 (360)
++.+||-+|+|. |..+..+++. |.+|++++.+++..+.+++++. ...++..+-. .... ...+|+|+....-.
T Consensus 45 ~~~~vLDiGcG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~-~~~~-~~~fD~v~~~~~l~~~~ 120 (220)
T 3hnr_A 45 SFGNVLEFGVGT-GNLTNKLLLA-GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFL-SFEV-PTSIDTIVSTYAFHHLT 120 (220)
T ss_dssp CCSEEEEECCTT-SHHHHHHHHT-TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSS-SCCC-CSCCSEEEEESCGGGSC
T ss_pred CCCeEEEeCCCC-CHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChh-hcCC-CCCeEEEEECcchhcCC
Confidence 788999999864 6666677766 8899999999999999988654 1122221111 1111 26899999754311
Q ss_pred -----ccHHHHHHHhccCCEEEEeC
Q 018158 260 -----HSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 260 -----~~~~~~~~~l~~~G~~v~~g 279 (360)
..+..+.+.|+++|.++...
T Consensus 121 ~~~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 121 DDEKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 15788899999999998763
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.011 Score=52.90 Aligned_cols=75 Identities=17% Similarity=0.166 Sum_probs=51.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC----------hhHHHHHHHH---cCCCeEe---eCccHHHHHhc-
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTS----------PSKEKEAKEL---LGADEFI---LSTNAMQMQAG- 245 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~----------~~~~~~~~~~---~g~~~~v---~~~~~~~~~~~- 245 (360)
.++++||+|+ |++|.++++.+...|++|++++++ .++.+.+.+. .|....+ |-.+.+.....
T Consensus 26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 105 (322)
T 3qlj_A 26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLI 105 (322)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence 6789999999 999999999888899999999887 4444443332 3432222 33333322221
Q ss_pred ------CCCcCEEEEcCCC
Q 018158 246 ------KRTLDFILDTVSA 258 (360)
Q Consensus 246 ------~~~~d~vid~~g~ 258 (360)
..++|++|+++|.
T Consensus 106 ~~~~~~~g~iD~lv~nAg~ 124 (322)
T 3qlj_A 106 QTAVETFGGLDVLVNNAGI 124 (322)
T ss_dssp HHHHHHHSCCCEEECCCCC
T ss_pred HHHHHHcCCCCEEEECCCC
Confidence 3479999999984
|
| >1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A* | Back alignment and structure |
|---|
Probab=96.28 E-value=0.024 Score=48.89 Aligned_cols=84 Identities=11% Similarity=0.118 Sum_probs=58.3
Q ss_pred EEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHHH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPI 265 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 265 (360)
+|.|+|+|.+|...+..+...| .+|+++++++++.+.+.+.+|....-+. .+.- ..|+||.|+. ...+..+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~------~~~~-~~D~vi~~v~-~~~~~~v 73 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATL------PELH-SDDVLILAVK-PQDMEAA 73 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSC------CCCC-TTSEEEECSC-HHHHHHH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCH------HHHh-cCCEEEEEeC-chhHHHH
Confidence 5889999999999888888889 8999999999998888775675322111 1123 6888888887 4345555
Q ss_pred HHHhcc-CCEEEEe
Q 018158 266 LELLKV-NGTLSVV 278 (360)
Q Consensus 266 ~~~l~~-~G~~v~~ 278 (360)
+..+.+ +..++++
T Consensus 74 ~~~l~~~~~ivv~~ 87 (263)
T 1yqg_A 74 CKNIRTNGALVLSV 87 (263)
T ss_dssp HTTCCCTTCEEEEC
T ss_pred HHHhccCCCEEEEe
Confidence 554542 3344444
|
| >3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A* | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0082 Score=51.47 Aligned_cols=96 Identities=16% Similarity=0.144 Sum_probs=66.1
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCC--eEeeCccHHHHHhcCCCcCEEEEcCC
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGAD--EFILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~--~~v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
+++.+||-+|+|. |..+..+++..+.+|++++.+++..+.++++ .|.. -.+...+..........+|+|+....
T Consensus 45 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 123 (257)
T 3f4k_A 45 TDDAKIADIGCGT-GGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGA 123 (257)
T ss_dssp CTTCEEEEETCTT-SHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESC
T ss_pred CCCCeEEEeCCCC-CHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecCh
Confidence 3889999999975 8888899998877999999999988877664 3322 11111111111112467999986432
Q ss_pred -----CcccHHHHHHHhccCCEEEEeC
Q 018158 258 -----AKHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 258 -----~~~~~~~~~~~l~~~G~~v~~g 279 (360)
....+..+.+.|+++|+++...
T Consensus 124 l~~~~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 124 IYNIGFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp SCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence 1234688888999999998764
|
| >3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=96.27 E-value=0.011 Score=49.77 Aligned_cols=95 Identities=16% Similarity=0.142 Sum_probs=64.0
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCC-CeEeeCccHHHHHh-cCCCcCEEEEcCC
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGA-DEFILSTNAMQMQA-GKRTLDFILDTVS 257 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~-~~~v~~~~~~~~~~-~~~~~d~vid~~g 257 (360)
+++++||=+|+|..|..++.+++..+.+|++++.+++..+.++++ .|. ..++..+-. .... ....+|+|+-...
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~-~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGG-IIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSC-SSTTTCCSCEEEEEECCC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCch-hhhhcccCceeEEEECCC
Confidence 489999999998668888888887788999999999988777664 232 223322210 1111 1367999995422
Q ss_pred C-------------------------cccHHHHHHHhccCCEEEEe
Q 018158 258 A-------------------------KHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 258 ~-------------------------~~~~~~~~~~l~~~G~~v~~ 278 (360)
- ...+..+.+.|+++|+++.+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 178 (230)
T 3evz_A 133 YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY 178 (230)
T ss_dssp CC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence 1 22456777788888888765
|
| >2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.27 E-value=0.02 Score=50.94 Aligned_cols=93 Identities=15% Similarity=0.186 Sum_probs=64.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHc-CC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAF-GH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~-G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
...++.|+|+|.+|...++.+... |. +|.+.+++.++.+.+.+.++.. +....+. .+.-.+.|+|+.|+.....
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~-~~~~~~~---~e~v~~aDiVi~atp~~~~ 209 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGE-VRVCSSV---QEAVAGADVIITVTLATEP 209 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSC-CEECSSH---HHHHTTCSEEEECCCCSSC
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCC-eEEeCCH---HHHHhcCCEEEEEeCCCCc
Confidence 567899999999999887766654 87 7999999999888887756631 1112222 2223568999999875322
Q ss_pred -HHHHHHHhccCCEEEEeCCCC
Q 018158 262 -LGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 262 -~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+.. ..++++..++++|...
T Consensus 210 v~~~--~~l~~g~~vi~~g~~~ 229 (312)
T 2i99_A 210 ILFG--EWVKPGAHINAVGASR 229 (312)
T ss_dssp CBCG--GGSCTTCEEEECCCCS
T ss_pred ccCH--HHcCCCcEEEeCCCCC
Confidence 111 5778888888887654
|
| >1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38 | Back alignment and structure |
|---|
Probab=96.27 E-value=0.025 Score=50.32 Aligned_cols=97 Identities=14% Similarity=0.164 Sum_probs=64.2
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHc---CCCeE-eeCccHHHHHhcCCCcCEEEE-
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAF--GHHVTVISTSPSKEKEAKELL---GADEF-ILSTNAMQMQAGKRTLDFILD- 254 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~--G~~V~~~~~~~~~~~~~~~~~---g~~~~-v~~~~~~~~~~~~~~~d~vid- 254 (360)
++++++||=+|+|+ |..++++++.+ +.+|++++.++.+.+.+++++ |...+ +...+..........+|.|+-
T Consensus 116 ~~~g~~VLDlg~G~-G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d 194 (315)
T 1ixk_A 116 PKPGEIVADMAAAP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLD 194 (315)
T ss_dssp CCTTCEEEECCSSC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEE
T ss_pred CCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEe
Confidence 34899998888854 55667777765 368999999999888877653 54222 222222222223457999985
Q ss_pred --cCCC-------------------------cccHHHHHHHhccCCEEEEeC
Q 018158 255 --TVSA-------------------------KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 255 --~~g~-------------------------~~~~~~~~~~l~~~G~~v~~g 279 (360)
|+|. ...+..+.+.|++||+++..-
T Consensus 195 ~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~st 246 (315)
T 1ixk_A 195 APCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYST 246 (315)
T ss_dssp CCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Confidence 3332 134677889999999998753
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.015 Score=52.12 Aligned_cols=75 Identities=17% Similarity=0.230 Sum_probs=50.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC-----hhHHHHHHHH---cCCCeE---eeCccHHHHHhc------
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTS-----PSKEKEAKEL---LGADEF---ILSTNAMQMQAG------ 245 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~-----~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~------ 245 (360)
.++++||+|+ |++|.++++.+...|++|++++++ .++.+.+.+. .+.... .|-.+.+.....
T Consensus 4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~ 83 (324)
T 3u9l_A 4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG 83 (324)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 4688999999 999999999999999999998775 3344433321 343221 244443333222
Q ss_pred -CCCcCEEEEcCCC
Q 018158 246 -KRTLDFILDTVSA 258 (360)
Q Consensus 246 -~~~~d~vid~~g~ 258 (360)
..++|++++++|.
T Consensus 84 ~~g~iD~lVnnAG~ 97 (324)
T 3u9l_A 84 EDGRIDVLIHNAGH 97 (324)
T ss_dssp HHSCCSEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 3489999999983
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0068 Score=54.37 Aligned_cols=72 Identities=21% Similarity=0.246 Sum_probs=50.5
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
.+|||+|+ |.+|..+++.+...|.+|++++++.++.+.+.. .+...+ .|..+.+.+...-.++|+||.+++.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~ 87 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAY-LEPECRVAEMLDHAGLERALRGLDGVIFSAGY 87 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGG-GCCEEEECCTTCHHHHHHHTTTCSEEEEC---
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhcc-CCeEEEEecCCCHHHHHHHHcCCCEEEECCcc
Confidence 47999999 999999999998899999999998765443322 233222 2444555555556689999999874
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.033 Score=54.29 Aligned_cols=97 Identities=18% Similarity=0.217 Sum_probs=63.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC-hhH-HHHHHHHcCCCeEeeCccH-HHH----Hh---cCCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTS-PSK-EKEAKELLGADEFILSTNA-MQM----QA---GKRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~-~~~-~~~~~~~~g~~~~v~~~~~-~~~----~~---~~~~~d~v 252 (360)
.|+++||+|+ +++|.+.++.+...|++|++.++. .++ .+.+++ .|...+....+. ... .. .-.++|++
T Consensus 321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~-~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiL 399 (604)
T 2et6_A 321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKA-AGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDIL 399 (604)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHH-TTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHh-cCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEE
Confidence 4788999999 999999999999999999998753 222 234444 564433332232 111 11 13579999
Q ss_pred EEcCCCc-------------------------ccHHHHHHHhc--cCCEEEEeCCC
Q 018158 253 LDTVSAK-------------------------HSLGPILELLK--VNGTLSVVGAP 281 (360)
Q Consensus 253 id~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g~~ 281 (360)
+++.|.. ...+.++..|+ .+|+|+.+++.
T Consensus 400 VnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ 455 (604)
T 2et6_A 400 VNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITST 455 (604)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCh
Confidence 9999832 11345566664 35899999764
|
| >2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A | Back alignment and structure |
|---|
Probab=96.24 E-value=0.0081 Score=51.64 Aligned_cols=94 Identities=12% Similarity=0.141 Sum_probs=64.4
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeEeeCccHHHHHhcCCCcCEEEEcCCC-
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEFILSTNAMQMQAGKRTLDFILDTVSA- 258 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~v~~~~~~~~~~~~~~~d~vid~~g~- 258 (360)
.++.+||-+|+|. |..+..+++. +.+|++++.+++..+.+++++ ...-.+...+..........+|+|+....-
T Consensus 38 ~~~~~vLDiG~G~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 115 (263)
T 2yqz_A 38 GEEPVFLELGVGT-GRIALPLIAR-GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWH 115 (263)
T ss_dssp SSCCEEEEETCTT-STTHHHHHTT-TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGG
T ss_pred CCCCEEEEeCCcC-CHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchh
Confidence 3889999999965 7777777776 889999999999999988854 111111111111111123569999975431
Q ss_pred -----cccHHHHHHHhccCCEEEEe
Q 018158 259 -----KHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 259 -----~~~~~~~~~~l~~~G~~v~~ 278 (360)
...+..+.+.|++||.++..
T Consensus 116 ~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 116 LVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 23567888999999999876
|
| >1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A* | Back alignment and structure |
|---|
Probab=96.24 E-value=0.0093 Score=53.59 Aligned_cols=87 Identities=17% Similarity=0.252 Sum_probs=64.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc---
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH--- 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~--- 260 (360)
.|+++.|+|.|.+|...++.++.+|++|++.+++.++. +.+ + .. .. .+. .+.-...|+|+.++....
T Consensus 145 ~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~~~-~-~~-~~--~~l---~ell~~aDvV~l~~p~~~~t~ 214 (333)
T 1j4a_A 145 RDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--LEK-K-GY-YV--DSL---DDLYKQADVISLHVPDVPANV 214 (333)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--HHH-T-TC-BC--SCH---HHHHHHCSEEEECSCCCGGGT
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--HHh-h-Ce-ec--CCH---HHHHhhCCEEEEcCCCcHHHH
Confidence 57899999999999999999999999999999887654 333 3 22 11 122 222346899999887432
Q ss_pred -cH-HHHHHHhccCCEEEEeCC
Q 018158 261 -SL-GPILELLKVNGTLSVVGA 280 (360)
Q Consensus 261 -~~-~~~~~~l~~~G~~v~~g~ 280 (360)
.+ ...+..|++++.+++++.
T Consensus 215 ~li~~~~l~~mk~ga~lIn~ar 236 (333)
T 1j4a_A 215 HMINDESIAKMKQDVVIVNVSR 236 (333)
T ss_dssp TCBSHHHHHHSCTTEEEEECSC
T ss_pred HHHhHHHHhhCCCCcEEEECCC
Confidence 12 467789999999988875
|
| >1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A* | Back alignment and structure |
|---|
Probab=96.23 E-value=0.016 Score=51.17 Aligned_cols=95 Identities=18% Similarity=0.202 Sum_probs=63.1
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcC--------CC-eEeeCccHHHHHhcCCCcCEEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLG--------AD-EFILSTNAMQMQAGKRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g--------~~-~~v~~~~~~~~~~~~~~~d~vi 253 (360)
.+++||++|+|. |..+..+++..+ .+|++++.+++..+.+++.+. .. .++..+...........+|+|+
T Consensus 90 ~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 90 NPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCEEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 558999998854 666777777755 589999999998888887541 11 2222222222223356799998
Q ss_pred EcCCC-----------cccHHHHHHHhccCCEEEEeC
Q 018158 254 DTVSA-----------KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 254 d~~g~-----------~~~~~~~~~~l~~~G~~v~~g 279 (360)
.-... ...+..+.+.|+++|.++...
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 42211 234688899999999998763
|
| >1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5 | Back alignment and structure |
|---|
Probab=96.21 E-value=0.11 Score=46.60 Aligned_cols=135 Identities=16% Similarity=0.111 Sum_probs=84.3
Q ss_pred CCcEEEEEcCC-hHHHHHHHHHHHc--CCeE-EEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCc
Q 018158 184 AKKRIGIVGLG-GLGHVAVKFGKAF--GHHV-TVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAK 259 (360)
Q Consensus 184 ~~~~vlI~Gag-~vG~~aiqla~~~--G~~V-~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~ 259 (360)
..-++.|+|+| .+|...+..++.. ++++ .+.++++++.+.+.+++|...++ .+.+.+- ....+|+|+.|+...
T Consensus 17 ~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~--~~~~~ll-~~~~vD~V~i~tp~~ 93 (340)
T 1zh8_A 17 RKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF--DSYEELL-ESGLVDAVDLTLPVE 93 (340)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE--SCHHHHH-HSSCCSEEEECCCGG
T ss_pred CceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCccc--CCHHHHh-cCCCCCEEEEeCCch
Confidence 33478899998 7898777766665 5675 56667888887777768864443 2222221 135799999999988
Q ss_pred ccHHHHHHHhccCCEEEEeCCCCCCcccChhh------H-hccCc-EEEEeecCCHHHHHHHHHHHhcCCCccc
Q 018158 260 HSLGPILELLKVNGTLSVVGAPEAPFELPSFP------L-IFGKR-SVKGSMTGGMRETQEMMNVCGKYNITCN 325 (360)
Q Consensus 260 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~------~-~~~~~-~i~~~~~~~~~~~~~~~~~l~~~~l~~~ 325 (360)
.....+..+++.|-. |.+-. ++..+... + -.++. -..++.......++.+.+++.+|.+-.+
T Consensus 94 ~H~~~~~~al~aGkh-Vl~EK---Pla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~g~iG~i 163 (340)
T 1zh8_A 94 LNLPFIEKALRKGVH-VICEK---PISTDVETGKKVVELSEKSEKTVYIAENFRHVPAFWKAKELVESGAIGDP 163 (340)
T ss_dssp GHHHHHHHHHHTTCE-EEEES---SSSSSHHHHHHHHHHHHHCSSCEEEECGGGGCHHHHHHHHHHHTTTTSSE
T ss_pred HHHHHHHHHHHCCCc-EEEeC---CCCCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHhcCCCCCc
Confidence 777888888888744 44433 22222221 1 12233 3344444444567888888888877443
|
| >3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.20 E-value=0.07 Score=49.09 Aligned_cols=136 Identities=13% Similarity=0.050 Sum_probs=84.0
Q ss_pred cEEEEEcCCh---HHHHHHHHHHHcC-CeEEE--EeCChhHHHHHHHHcCCCeEeeCccHHHHHhc----CCCcCEEEEc
Q 018158 186 KRIGIVGLGG---LGHVAVKFGKAFG-HHVTV--ISTSPSKEKEAKELLGADEFILSTNAMQMQAG----KRTLDFILDT 255 (360)
Q Consensus 186 ~~vlI~Gag~---vG~~aiqla~~~G-~~V~~--~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~----~~~~d~vid~ 255 (360)
-++.|+|+|. +|...+..++..+ +++++ .++++++.+.+.+++|....-.+.+.+.+-.. ...+|+|+.|
T Consensus 13 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~i~ 92 (398)
T 3dty_A 13 IRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVSIA 92 (398)
T ss_dssp EEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEEEE
T ss_pred ceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEEEC
Confidence 4789999988 9987777666654 67664 47888888877776886411113333222221 1469999999
Q ss_pred CCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhh------H-hccCcEE-EEeecCCHHHHHHHHHHHhcCCCccc
Q 018158 256 VSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFP------L-IFGKRSV-KGSMTGGMRETQEMMNVCGKYNITCN 325 (360)
Q Consensus 256 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~------~-~~~~~~i-~~~~~~~~~~~~~~~~~l~~~~l~~~ 325 (360)
+........+..+++.|-+ |.+-. ++..+... + -.+++.+ .++.......++.+.+++.+|.+-.+
T Consensus 93 tp~~~H~~~~~~al~aGkh-Vl~EK---Pla~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~G~iG~i 166 (398)
T 3dty_A 93 TPNGTHYSITKAALEAGLH-VVCEK---PLCFTVEQAENLRELSHKHNRIVGVTYGYAGHQLIEQAREMIAAGELGDV 166 (398)
T ss_dssp SCGGGHHHHHHHHHHTTCE-EEECS---CSCSCHHHHHHHHHHHHHTTCCEEECCGGGGSHHHHHHHHHHHTTTTCSE
T ss_pred CCcHHHHHHHHHHHHCCCe-EEEeC---CCcCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHhcCCCCCe
Confidence 9988778888888887754 45532 23333221 1 1223333 33333333557788888888887443
|
| >3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.011 Score=49.13 Aligned_cols=90 Identities=24% Similarity=0.202 Sum_probs=63.8
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCC-----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSA----- 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~----- 258 (360)
++.+||-+|+|. |..+..+++. |.+|++++.+++..+.++++++..... . +..... ....+|+|+....-
T Consensus 43 ~~~~vLDiGcG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~-d~~~~~-~~~~fD~v~~~~~l~~~~~ 117 (211)
T 3e23_A 43 AGAKILELGCGA-GYQAEAMLAA-GFDVDATDGSPELAAEASRRLGRPVRT-M-LFHQLD-AIDAYDAVWAHACLLHVPR 117 (211)
T ss_dssp TTCEEEESSCTT-SHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTSCCEE-C-CGGGCC-CCSCEEEEEECSCGGGSCH
T ss_pred CCCcEEEECCCC-CHHHHHHHHc-CCeEEEECCCHHHHHHHHHhcCCceEE-e-eeccCC-CCCcEEEEEecCchhhcCH
Confidence 788999988853 6666677766 889999999999999998866543221 1 111111 35679999975421
Q ss_pred ---cccHHHHHHHhccCCEEEEe
Q 018158 259 ---KHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 259 ---~~~~~~~~~~l~~~G~~v~~ 278 (360)
...+..+.+.|+++|.++..
T Consensus 118 ~~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 118 DELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEE
Confidence 13467888999999999876
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.0066 Score=53.33 Aligned_cols=87 Identities=18% Similarity=0.170 Sum_probs=60.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHHHH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPIL 266 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~ 266 (360)
+|.|+|.|.+|...++.+...|.+|++.++++++.+.+.+ .|.... .+.. +.-...|+||.|+.....+...+
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~~---~~~~---~~~~~advvi~~v~~~~~~~~v~ 75 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVA-LGARQA---SSPA---EVCAACDITIAMLADPAAAREVC 75 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHH-HTCEEC---SCHH---HHHHHCSEEEECCSSHHHHHHHH
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-CCCeec---CCHH---HHHHcCCEEEEEcCCHHHHHHHH
Confidence 5789999999999888888889999999999999888887 664321 1111 11234788888887653344443
Q ss_pred -------HHhccCCEEEEeCC
Q 018158 267 -------ELLKVNGTLSVVGA 280 (360)
Q Consensus 267 -------~~l~~~G~~v~~g~ 280 (360)
..++++..+++.+.
T Consensus 76 ~~~~~l~~~l~~g~~vv~~st 96 (287)
T 3pdu_A 76 FGANGVLEGIGGGRGYIDMST 96 (287)
T ss_dssp HSTTCGGGTCCTTCEEEECSC
T ss_pred cCchhhhhcccCCCEEEECCC
Confidence 33455556666543
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.011 Score=48.75 Aligned_cols=70 Identities=21% Similarity=0.257 Sum_probs=49.8
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE--eeCccHHHHHhcC---CCcCEEEEcCCC
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF--ILSTNAMQMQAGK---RTLDFILDTVSA 258 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~--v~~~~~~~~~~~~---~~~d~vid~~g~ 258 (360)
+++||+|+ |.+|..+++.+... +|+++++++++.+.+.+.++. .. .|..+.+.....- .++|++|++.|.
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 76 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEEAGPLDLLVHAVGK 76 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEECCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 36899999 99999887777666 999999999887777664543 22 2344443333332 389999999874
|
| >3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.02 Score=49.49 Aligned_cols=96 Identities=25% Similarity=0.309 Sum_probs=65.4
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC---eEeeCccHHHHHhcCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD---EFILSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~~~~~d~vid~ 255 (360)
++++.+||-+|+|. |..+..+++..+.+|++++.+++..+.+++++ |.. .++.. +..........+|+|+..
T Consensus 59 ~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~fD~v~~~ 136 (273)
T 3bus_A 59 VRSGDRVLDVGCGI-GKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYA-DAMDLPFEDASFDAVWAL 136 (273)
T ss_dssp CCTTCEEEEESCTT-SHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC-CTTSCCSCTTCEEEEEEE
T ss_pred CCCCCEEEEeCCCC-CHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEC-ccccCCCCCCCccEEEEe
Confidence 44899999999975 77888888888999999999998887776642 321 12211 111111113579999854
Q ss_pred CCC------cccHHHHHHHhccCCEEEEeC
Q 018158 256 VSA------KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 256 ~g~------~~~~~~~~~~l~~~G~~v~~g 279 (360)
..- ...+..+.+.|+++|+++...
T Consensus 137 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 137 ESLHHMPDRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp SCTTTSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred chhhhCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 321 234678889999999997664
|
| >3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.016 Score=49.08 Aligned_cols=95 Identities=17% Similarity=0.211 Sum_probs=64.1
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhcCCCcCEEEEcCCCc---
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAGKRTLDFILDTVSAK--- 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g~~--- 259 (360)
++.+||-+|+|. |..+..+++. |++|++++.+++..+.++++.....+ +...+..........+|+|+....-.
T Consensus 53 ~~~~vLDiG~G~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 130 (242)
T 3l8d_A 53 KEAEVLDVGCGD-GYGTYKLSRT-GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTE 130 (242)
T ss_dssp TTCEEEEETCTT-SHHHHHHHHT-TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSS
T ss_pred CCCeEEEEcCCC-CHHHHHHHHc-CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhcc
Confidence 788999999864 6666777776 88999999999999888884221111 11111111111246799999754321
Q ss_pred ---ccHHHHHHHhccCCEEEEeCC
Q 018158 260 ---HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 260 ---~~~~~~~~~l~~~G~~v~~g~ 280 (360)
..+..+.+.|+++|.++....
T Consensus 131 ~~~~~l~~~~~~L~pgG~l~i~~~ 154 (242)
T 3l8d_A 131 EPLRALNEIKRVLKSDGYACIAIL 154 (242)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHhCCCeEEEEEEc
Confidence 357889999999999887643
|
| >3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.09 Score=48.70 Aligned_cols=136 Identities=16% Similarity=0.147 Sum_probs=84.0
Q ss_pred cEEEEEcCCh---HHHHHHHHHHHcC-CeEE--EEeCChhHHHHHHHHcCCCeEeeCccHHHHHhc----CCCcCEEEEc
Q 018158 186 KRIGIVGLGG---LGHVAVKFGKAFG-HHVT--VISTSPSKEKEAKELLGADEFILSTNAMQMQAG----KRTLDFILDT 255 (360)
Q Consensus 186 ~~vlI~Gag~---vG~~aiqla~~~G-~~V~--~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~----~~~~d~vid~ 255 (360)
-++.|+|+|. +|...+..++..+ ++++ +.++++++.+.+.+++|....-.+.+.+.+-.. ...+|+|+.|
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~I~ 117 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAVAIV 117 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEEEEC
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEEEEC
Confidence 4789999987 9987777666665 5765 457888888777776886411113333222221 1579999999
Q ss_pred CCCcccHHHHHHHhccCCEEEEeCCCCCCcccChh------hH-hccCc-EEEEeecCCHHHHHHHHHHHhcCCCccc
Q 018158 256 VSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSF------PL-IFGKR-SVKGSMTGGMRETQEMMNVCGKYNITCN 325 (360)
Q Consensus 256 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~------~~-~~~~~-~i~~~~~~~~~~~~~~~~~l~~~~l~~~ 325 (360)
+........+..+++.|-. |.+-.+ +..+.. .+ -.+++ ...++.......++.+.+++.+|.+-.+
T Consensus 118 tp~~~H~~~~~~al~aGkh-Vl~EKP---la~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG~i 191 (417)
T 3v5n_A 118 TPNHVHYAAAKEFLKRGIH-VICDKP---LTSTLADAKKLKKAADESDALFVLTHNYTGYPMVRQAREMIENGDIGAV 191 (417)
T ss_dssp SCTTSHHHHHHHHHTTTCE-EEEESS---SCSSHHHHHHHHHHHHHCSSCEEEECGGGGSHHHHHHHHHHHTTTTCSE
T ss_pred CCcHHHHHHHHHHHhCCCe-EEEECC---CcCCHHHHHHHHHHHHHcCCEEEEEecccCCHHHHHHHHHHhcCCCCCe
Confidence 9988777888888888754 455332 222221 11 11233 3344444444567888889998887443
|
| >3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.02 Score=51.48 Aligned_cols=93 Identities=22% Similarity=0.172 Sum_probs=64.4
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHH
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGP 264 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~ 264 (360)
-.+|.|+|.|.+|...+..++..|.+|++.++++++.+.+++ +|.....+ ..+.......+.|+||-|+.... +..
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~-~G~~~~~~--~~e~~~~a~~~aDlVilavP~~~-~~~ 83 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVD-EGFDVSAD--LEATLQRAAAEDALIVLAVPMTA-IDS 83 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHH-TTCCEESC--HHHHHHHHHHTTCEEEECSCHHH-HHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeeeCC--HHHHHHhcccCCCEEEEeCCHHH-HHH
Confidence 357899999999999999999999999999999999998888 88743211 11112222235799999998542 333
Q ss_pred HHHH---hccCCEEEEeCCC
Q 018158 265 ILEL---LKVNGTLSVVGAP 281 (360)
Q Consensus 265 ~~~~---l~~~G~~v~~g~~ 281 (360)
+++. ++++..+++++..
T Consensus 84 vl~~l~~~~~~~iv~Dv~Sv 103 (341)
T 3ktd_A 84 LLDAVHTHAPNNGFTDVVSV 103 (341)
T ss_dssp HHHHHHHHCTTCCEEECCSC
T ss_pred HHHHHHccCCCCEEEEcCCC
Confidence 3222 3566666667644
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=96.17 E-value=0.014 Score=50.84 Aligned_cols=89 Identities=11% Similarity=0.118 Sum_probs=63.5
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhcCCCcCEEEEcCCCcc----
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAGKRTLDFILDTVSAKH---- 260 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g~~~---- 260 (360)
.+|||+|+|.+|..++..+...|.+|++++|++++...+.. .+.+.+ .|..+. . ..++|+||.+++...
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~d~---~--~~~~d~vi~~a~~~~~~~~ 79 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-SGAEPLLWPGEEP---S--LDGVTHLLISTAPDSGGDP 79 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-TTEEEEESSSSCC---C--CTTCCEEEECCCCBTTBCH
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-CCCeEEEeccccc---c--cCCCCEEEECCCccccccH
Confidence 57999999999999999999999999999999988777766 554322 222221 1 468999999997431
Q ss_pred cHHHHHHHhcc----CCEEEEeCC
Q 018158 261 SLGPILELLKV----NGTLSVVGA 280 (360)
Q Consensus 261 ~~~~~~~~l~~----~G~~v~~g~ 280 (360)
....+++.++. -.+++.++.
T Consensus 80 ~~~~l~~a~~~~~~~~~~~v~~Ss 103 (286)
T 3ius_A 80 VLAALGDQIAARAAQFRWVGYLST 103 (286)
T ss_dssp HHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred HHHHHHHHHHhhcCCceEEEEeec
Confidence 13445555544 257877653
|
| >4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=96.17 E-value=0.01 Score=53.43 Aligned_cols=88 Identities=14% Similarity=0.191 Sum_probs=64.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCc----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAK---- 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~---- 259 (360)
.|+++.|+|.|.+|...++.++..|++|++.+++....+.. .|...+ .+ ..+.-...|+|+.++...
T Consensus 172 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~---~g~~~~---~~---l~ell~~sDvV~l~~Plt~~T~ 242 (345)
T 4g2n_A 172 TGRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALE---EGAIYH---DT---LDSLLGASDIFLIAAPGRPELK 242 (345)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH---TTCEEC---SS---HHHHHHTCSEEEECSCCCGGGT
T ss_pred CCCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhh---cCCeEe---CC---HHHHHhhCCEEEEecCCCHHHH
Confidence 57899999999999999999999999999999876443322 243221 12 222345689999888742
Q ss_pred c-cHHHHHHHhccCCEEEEeCC
Q 018158 260 H-SLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 260 ~-~~~~~~~~l~~~G~~v~~g~ 280 (360)
. .-...+..|+++..+++++.
T Consensus 243 ~li~~~~l~~mk~gailIN~aR 264 (345)
T 4g2n_A 243 GFLDHDRIAKIPEGAVVINISR 264 (345)
T ss_dssp TCBCHHHHHHSCTTEEEEECSC
T ss_pred HHhCHHHHhhCCCCcEEEECCC
Confidence 1 12577889999999988874
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.0051 Score=53.04 Aligned_cols=72 Identities=18% Similarity=0.197 Sum_probs=49.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHhc------CCCcCEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQAG------KRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~------~~~~d~vi 253 (360)
.++++||+|+ +++|.++++.+...|++|++++++.++. ..+ ++.... .|-.+.+..... ..++|+++
T Consensus 8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv 84 (257)
T 3tl3_A 8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV--VAD-LGDRARFAAADVTDEAAVASALDLAETMGTLRIVV 84 (257)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH--HHH-TCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH--HHh-cCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEE
Confidence 5789999999 9999999998889999999999865432 233 554322 244443332222 35899999
Q ss_pred EcCCC
Q 018158 254 DTVSA 258 (360)
Q Consensus 254 d~~g~ 258 (360)
+++|.
T Consensus 85 ~nAg~ 89 (257)
T 3tl3_A 85 NCAGT 89 (257)
T ss_dssp ECGGG
T ss_pred ECCCC
Confidence 99983
|
| >3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A* | Back alignment and structure |
|---|
Probab=96.15 E-value=0.084 Score=47.47 Aligned_cols=132 Identities=16% Similarity=0.143 Sum_probs=82.5
Q ss_pred EEEEEcCChHHHHHHHHHH-H-cCCeEE-EEeCChhHHHHHHHHcCC-CeEeeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 187 RIGIVGLGGLGHVAVKFGK-A-FGHHVT-VISTSPSKEKEAKELLGA-DEFILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~-~-~G~~V~-~~~~~~~~~~~~~~~~g~-~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
++.|+|+|.+|...+..++ . -+++++ +.++++++.+.+.+++|. ...+ .+.+.+.. ...+|+|+.|+....+.
T Consensus 4 rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~--~~~~~ll~-~~~~D~V~i~tp~~~h~ 80 (344)
T 3mz0_A 4 RIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVY--PNDDSLLA-DENVDAVLVTSWGPAHE 80 (344)
T ss_dssp EEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEE--SSHHHHHH-CTTCCEEEECSCGGGHH
T ss_pred EEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeee--CCHHHHhc-CCCCCEEEECCCchhHH
Confidence 6889999999988777766 4 467755 667788887777776883 3333 22222211 35799999999988777
Q ss_pred HHHHHHhccCCEEEEeCCCCCCcccChhh------H-hccCcE--EEEeecCCHHHHHHHHHHHhcCCCccc
Q 018158 263 GPILELLKVNGTLSVVGAPEAPFELPSFP------L-IFGKRS--VKGSMTGGMRETQEMMNVCGKYNITCN 325 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~------~-~~~~~~--i~~~~~~~~~~~~~~~~~l~~~~l~~~ 325 (360)
..+..+++.|-+ +.+-. ++..+... + -.++.. ..++.......++.+.+++.+|.+-.+
T Consensus 81 ~~~~~al~~Gk~-vl~EK---P~a~~~~e~~~l~~~a~~~g~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i 148 (344)
T 3mz0_A 81 SSVLKAIKAQKY-VFCEK---PLATTAEGCMRIVEEEIKVGKRLVQVGFMRRYDSGYVQLKEALDNHVIGEP 148 (344)
T ss_dssp HHHHHHHHTTCE-EEECS---CSCSSHHHHHHHHHHHHHHSSCCEEECCGGGGSHHHHHHHHHHHTTTTSSE
T ss_pred HHHHHHHHCCCc-EEEcC---CCCCCHHHHHHHHHHHHHHCCEEEEEecccccCHHHHHHHHHHHcCCCCCc
Confidence 888888887754 44432 22222211 1 112332 344444444567788888888877443
|
| >1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A* | Back alignment and structure |
|---|
Probab=96.14 E-value=0.021 Score=49.91 Aligned_cols=92 Identities=15% Similarity=0.246 Sum_probs=63.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHc----CC---------C--eEeeCccHHHHHhcCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELL----GA---------D--EFILSTNAMQMQAGKR 247 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~----g~---------~--~~v~~~~~~~~~~~~~ 247 (360)
.+++||++|+|. |..+..+++. +. +|++++.+++..+.+++.+ +. . .++..+..+.... ..
T Consensus 75 ~~~~VLdiG~G~-G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~ 151 (281)
T 1mjf_A 75 KPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NR 151 (281)
T ss_dssp CCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CC
T ss_pred CCCeEEEEcCCc-CHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cC
Confidence 568999999864 6667777777 65 8999999999999888866 21 1 2222222222333 56
Q ss_pred CcCEEEEcCCC----------cccHHHHHHHhccCCEEEEe
Q 018158 248 TLDFILDTVSA----------KHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 248 ~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~ 278 (360)
.+|+|+--... ...+..+.+.|+++|.++..
T Consensus 152 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 152 GFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp CEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred CeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 79999853321 23468889999999999765
|
| >2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=96.14 E-value=0.013 Score=50.30 Aligned_cols=95 Identities=16% Similarity=0.134 Sum_probs=65.7
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCC--
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSA-- 258 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~-- 258 (360)
..++.+||-+|+| .|..+..+++.. +.+|++++.+++..+.++++.....++..+-. ... ....+|+|+....-
T Consensus 31 ~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~l~~ 107 (259)
T 2p35_A 31 LERVLNGYDLGCG-PGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLA-TWK-PAQKADLLYANAVFQW 107 (259)
T ss_dssp CSCCSSEEEETCT-TTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTT-TCC-CSSCEEEEEEESCGGG
T ss_pred CCCCCEEEEecCc-CCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChh-hcC-ccCCcCEEEEeCchhh
Confidence 3488899999996 477777777776 67999999999999998885332233322211 111 34679999975531
Q ss_pred ----cccHHHHHHHhccCCEEEEeC
Q 018158 259 ----KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 259 ----~~~~~~~~~~l~~~G~~v~~g 279 (360)
...+..+.+.|+++|.++..-
T Consensus 108 ~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 108 VPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp STTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 234677888999999998763
|
| >2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=96.13 E-value=0.025 Score=50.30 Aligned_cols=95 Identities=23% Similarity=0.253 Sum_probs=64.1
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHcCC--------C-eEeeCccHHHHHhcCCCcCEEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKELLGA--------D-EFILSTNAMQMQAGKRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~~g~--------~-~~v~~~~~~~~~~~~~~~d~vi 253 (360)
.+++||++|+|. |..+..+++.. +.+|++++.+++-.+.+++.+.. . .++..+..+........+|+|+
T Consensus 108 ~~~~VLdIG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 108 DPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEEcCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 568999999853 66677777765 46899999999999998886631 1 2222222222333356799998
Q ss_pred EcCCC----------cccHHHHHHHhccCCEEEEeC
Q 018158 254 DTVSA----------KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 254 d~~g~----------~~~~~~~~~~l~~~G~~v~~g 279 (360)
.-... ...+..+.+.|+++|.++.-.
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 53321 245778899999999998754
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.032 Score=48.21 Aligned_cols=88 Identities=14% Similarity=0.169 Sum_probs=62.3
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
+.+|.|+|+|.+|...++.+...|.+ |+++++++++.+.+.+.+|....- + ..+.-...|+||.|+.... ..
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~---~---~~~~~~~~Dvvi~av~~~~-~~ 82 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTT---D---LAEVNPYAKLYIVSLKDSA-FA 82 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEES---C---GGGSCSCCSEEEECCCHHH-HH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeC---C---HHHHhcCCCEEEEecCHHH-HH
Confidence 34689999999999988888888998 899999999888887756753221 1 1223457999999998763 34
Q ss_pred HHHHHh----ccCCEEEEeC
Q 018158 264 PILELL----KVNGTLSVVG 279 (360)
Q Consensus 264 ~~~~~l----~~~G~~v~~g 279 (360)
.+++.+ +++..++++.
T Consensus 83 ~v~~~l~~~~~~~~ivv~~s 102 (266)
T 3d1l_A 83 ELLQGIVEGKREEALMVHTA 102 (266)
T ss_dssp HHHHHHHTTCCTTCEEEECC
T ss_pred HHHHHHHhhcCCCcEEEECC
Confidence 444443 3555666664
|
| >3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP} | Back alignment and structure |
|---|
Probab=96.12 E-value=0.017 Score=48.95 Aligned_cols=96 Identities=17% Similarity=0.214 Sum_probs=66.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHc---CCC---eEeeCccHHHHHhc---C--CCcC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAF--GHHVTVISTSPSKEKEAKELL---GAD---EFILSTNAMQMQAG---K--RTLD 250 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~--G~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~---~--~~~d 250 (360)
++++||-+|+| .|..++.+++.. +.+|+.++.+++..+.+++.+ |.. .++.....+..... . ..+|
T Consensus 72 ~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 72 GAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp TCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred CCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 67899999997 688889999886 569999999999888777643 432 22222222222222 2 6799
Q ss_pred EEEEcCCC---cccHHHHHHHhccCCEEEEeCC
Q 018158 251 FILDTVSA---KHSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 251 ~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~ 280 (360)
+||-.... ...+..+.+.|++||.++.-..
T Consensus 151 ~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 151 LIFIDADKRNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp EEEECSCGGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred EEEECCCHHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 99844332 1236788899999999987543
|
| >2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A* | Back alignment and structure |
|---|
Probab=96.11 E-value=0.014 Score=51.72 Aligned_cols=95 Identities=19% Similarity=0.215 Sum_probs=64.1
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcC--------C-CeEeeCccHHHHHhcCCCcCEEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLG--------A-DEFILSTNAMQMQAGKRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g--------~-~~~v~~~~~~~~~~~~~~~d~vi 253 (360)
.+++||++|+|. |..+..+++..+ .+|++++.+++-.+.+++.+. . -.++..+..+........+|+|+
T Consensus 95 ~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 95 NPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCEEEEECCCc-hHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 668999999853 666777877754 589999999998888887542 1 12232222222333356799998
Q ss_pred EcCCC----------cccHHHHHHHhccCCEEEEeC
Q 018158 254 DTVSA----------KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 254 d~~g~----------~~~~~~~~~~l~~~G~~v~~g 279 (360)
.-... ...+..+.+.|+++|.++.-.
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 43322 234788899999999998653
|
| >4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae} | Back alignment and structure |
|---|
Probab=96.10 E-value=0.087 Score=48.65 Aligned_cols=133 Identities=11% Similarity=0.093 Sum_probs=85.2
Q ss_pred cEEEEEcCChHHHHHHHHHHHc---------CCeEE-EEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEc
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAF---------GHHVT-VISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~---------G~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~ 255 (360)
=+|-|+|+|.+|..-+...+.. +++|+ +.++++++.+.+.+++|...++. +.+.+- ....+|+|+.|
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~--d~~~ll-~~~~vD~V~I~ 103 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYG--DWRELV-NDPQVDVVDIT 103 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEES--SHHHHH-HCTTCCEEEEC
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEEC--CHHHHh-cCCCCCEEEEC
Confidence 3689999999998766665543 35655 45677888888777799766543 222221 14579999999
Q ss_pred CCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhh---H-----hccCcEEEEeecCCHHHHHHHHHHHhcCCCccc
Q 018158 256 VSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFP---L-----IFGKRSVKGSMTGGMRETQEMMNVCGKYNITCN 325 (360)
Q Consensus 256 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~---~-----~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~ 325 (360)
+........+..+++.|-+ |.+-.+ +..+... + -.+.....+........++.+.+++.+|.+=.+
T Consensus 104 tp~~~H~~~~~~al~aGkh-Vl~EKP---~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG~i 177 (412)
T 4gqa_A 104 SPNHLHYTMAMAAIAAGKH-VYCEKP---LAVNEQQAQEMAQAARRAGVKTMVAFNNIKTPAALLAKQIIARGDIGEP 177 (412)
T ss_dssp SCGGGHHHHHHHHHHTTCE-EEEESC---SCSSHHHHHHHHHHHHHHTCCEEEECGGGTSHHHHHHHHHHHHTTTCSE
T ss_pred CCcHHHHHHHHHHHHcCCC-eEeecC---CcCCHHHHHHHHHHHHHhCCeeeeccceecCHHHHHHHHHHhcCCcCCe
Confidence 9988888888888888744 455332 2222221 1 112334445544444567788888888887443
|
| >3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440} | Back alignment and structure |
|---|
Probab=96.09 E-value=0.025 Score=47.19 Aligned_cols=95 Identities=19% Similarity=0.225 Sum_probs=65.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHH--H-hcCCCcCEEEEcCCC--
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQM--Q-AGKRTLDFILDTVSA-- 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~--~-~~~~~~d~vid~~g~-- 258 (360)
++.+||-+|+|. |..+..+++. |.+|++++.+++..+.+++ .+...++...-.+.. . .....+|+|+....-
T Consensus 52 ~~~~vLdiG~G~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~~ 128 (227)
T 3e8s_A 52 QPERVLDLGCGE-GWLLRALADR-GIEAVGVDGDRTLVDAARA-AGAGEVHLASYAQLAEAKVPVGKDYDLICANFALLH 128 (227)
T ss_dssp CCSEEEEETCTT-CHHHHHHHTT-TCEEEEEESCHHHHHHHHH-TCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCCS
T ss_pred CCCEEEEeCCCC-CHHHHHHHHC-CCEEEEEcCCHHHHHHHHH-hcccccchhhHHhhcccccccCCCccEEEECchhhh
Confidence 678999999864 6666777776 8899999999999999988 443333322222111 1 113459999875432
Q ss_pred ---cccHHHHHHHhccCCEEEEeCCC
Q 018158 259 ---KHSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 259 ---~~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
...+..+.+.|+++|.++.....
T Consensus 129 ~~~~~~l~~~~~~L~pgG~l~~~~~~ 154 (227)
T 3e8s_A 129 QDIIELLSAMRTLLVPGGALVIQTLH 154 (227)
T ss_dssp SCCHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hhHHHHHHHHHHHhCCCeEEEEEecC
Confidence 23578889999999999876543
|
| >2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* | Back alignment and structure |
|---|
Probab=96.08 E-value=0.016 Score=50.79 Aligned_cols=84 Identities=13% Similarity=0.106 Sum_probs=58.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHHHH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPIL 266 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~ 266 (360)
+|.|+|+|.+|...+..+.. |.+|+++++++++.+.+.+ .|.... + . .+.-...|+||.|+.....+..++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~-~g~~~~-~--~----~~~~~~~D~vi~~v~~~~~~~~v~ 73 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQE-EFGSEA-V--P----LERVAEARVIFTCLPTTREVYEVA 73 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHH-HHCCEE-C--C----GGGGGGCSEEEECCSSHHHHHHHH
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHH-CCCccc-C--H----HHHHhCCCEEEEeCCChHHHHHHH
Confidence 57899999999988877777 9999999999998888777 464322 1 1 112246899999998764344444
Q ss_pred H----HhccCCEEEEeC
Q 018158 267 E----LLKVNGTLSVVG 279 (360)
Q Consensus 267 ~----~l~~~G~~v~~g 279 (360)
+ .++++..+++.+
T Consensus 74 ~~l~~~l~~~~~vv~~s 90 (289)
T 2cvz_A 74 EALYPYLREGTYWVDAT 90 (289)
T ss_dssp HHHTTTCCTTEEEEECS
T ss_pred HHHHhhCCCCCEEEECC
Confidence 3 344555566554
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.08 E-value=0.015 Score=51.27 Aligned_cols=92 Identities=18% Similarity=0.253 Sum_probs=60.7
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCh------hHHHHHHH--HcCCCeE-eeCccHHHHHhcCCCcCEEEE
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSP------SKEKEAKE--LLGADEF-ILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~------~~~~~~~~--~~g~~~~-v~~~~~~~~~~~~~~~d~vid 254 (360)
.++|+|+|+ |.+|..+++.+...|.+|++++|+. ++.+.++. ..|.+.+ .|..+.+.+...-+++|+||.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 467999999 9999999999988999999999873 33333332 1243322 255555555555567999999
Q ss_pred cCCCcc--cHHHHHHHhccC---CEEE
Q 018158 255 TVSAKH--SLGPILELLKVN---GTLS 276 (360)
Q Consensus 255 ~~g~~~--~~~~~~~~l~~~---G~~v 276 (360)
+++... ....+++.++.. ++++
T Consensus 84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (308)
T 1qyc_A 84 TVGSLQIESQVNIIKAIKEVGTVKRFF 110 (308)
T ss_dssp CCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred CCcchhhhhHHHHHHHHHhcCCCceEe
Confidence 998531 234555555543 4676
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.07 E-value=0.01 Score=53.27 Aligned_cols=75 Identities=15% Similarity=0.158 Sum_probs=51.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHH----HHHHcCCC-eE--eeCccHHHHHhc--CCCcCEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKE----AKELLGAD-EF--ILSTNAMQMQAG--KRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~----~~~~~g~~-~~--v~~~~~~~~~~~--~~~~d~vi 253 (360)
.+.+|||+|+ |.+|..+++.+...|++|++++++.++... +.+..+.. .. .|-.+.+..... ..++|+||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 83 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI 83 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence 4678999999 999999999999999999999986554322 22212322 22 234444444333 24899999
Q ss_pred EcCCC
Q 018158 254 DTVSA 258 (360)
Q Consensus 254 d~~g~ 258 (360)
++++.
T Consensus 84 h~A~~ 88 (341)
T 3enk_A 84 HFAAL 88 (341)
T ss_dssp ECCCC
T ss_pred ECccc
Confidence 99985
|
| >2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A* | Back alignment and structure |
|---|
Probab=96.07 E-value=0.029 Score=49.07 Aligned_cols=96 Identities=17% Similarity=0.169 Sum_probs=64.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHcCC--------C-eEeeCccHHHHHhcCCCcCEEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKELLGA--------D-EFILSTNAMQMQAGKRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~~g~--------~-~~v~~~~~~~~~~~~~~~d~vi 253 (360)
++++||++|+|. |..+..+++.. +.+|++++.+++-.+.+++.+.. . .++..+..+........+|+|+
T Consensus 78 ~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 78 EPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCeEEEEeCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 668999998853 56666777765 45899999999999998886642 1 2222222222333356799998
Q ss_pred EcCCC----------cccHHHHHHHhccCCEEEEeCC
Q 018158 254 DTVSA----------KHSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 254 d~~g~----------~~~~~~~~~~l~~~G~~v~~g~ 280 (360)
.-... ...+..+.+.|+++|.++....
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 52211 2346788899999999987643
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.07 E-value=0.032 Score=50.45 Aligned_cols=91 Identities=19% Similarity=0.160 Sum_probs=59.9
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEee--------C-ccHHHHHhcCCCcCEEEEcC
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFIL--------S-TNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~--------~-~~~~~~~~~~~~~d~vid~~ 256 (360)
.+|.|+|+|.+|...+..+...|.+|+++++++++.+.+++..+. .+.. . .......+....+|+||.|+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v 83 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAI-IAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV 83 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSE-EEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCe-EEeccccccccccceecCCHHHHHhcCCEEEEeC
Confidence 478999999999998888888899999999999988888773231 1100 0 00111122235799999999
Q ss_pred CCcccHHHHHHH----hccCCEEEEe
Q 018158 257 SAKHSLGPILEL----LKVNGTLSVV 278 (360)
Q Consensus 257 g~~~~~~~~~~~----l~~~G~~v~~ 278 (360)
..... ..+++. ++++..++..
T Consensus 84 ~~~~~-~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 84 PAIHH-ASIAANIASYISEGQLIILN 108 (359)
T ss_dssp CGGGH-HHHHHHHGGGCCTTCEEEES
T ss_pred CchHH-HHHHHHHHHhCCCCCEEEEc
Confidence 87643 444443 3445555555
|
| >3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=96.07 E-value=0.021 Score=47.82 Aligned_cols=96 Identities=20% Similarity=0.182 Sum_probs=65.8
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHc---CCC---eEeeCccHHHHHhcC-----CCcC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAF--GHHVTVISTSPSKEKEAKELL---GAD---EFILSTNAMQMQAGK-----RTLD 250 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~--G~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~~-----~~~d 250 (360)
++++||-+|+|. |..++.+++.. +.+|++++.+++..+.+++.+ |.. .++.....+...... ..+|
T Consensus 64 ~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 64 QAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp TCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred CCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 778999999864 78888888876 568999999999887777653 432 222222222222222 6899
Q ss_pred EEEEcCCCc---ccHHHHHHHhccCCEEEEeCC
Q 018158 251 FILDTVSAK---HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 251 ~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~ 280 (360)
+|+-..... ..+..+.+.|++||.++.-..
T Consensus 143 ~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 143 LIYIDADKANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp EEEECSCGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEEECCCHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 998544322 236788899999999987543
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.06 E-value=0.015 Score=51.60 Aligned_cols=91 Identities=16% Similarity=0.200 Sum_probs=63.8
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
...+|.|+|.|.+|...++.+...|.+|++.++++++.+.+.+ .|... ..+.. +.-...|+||.++.....+.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~---~~~~~---e~~~~aDvVi~~vp~~~~~~ 80 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVA-AGAHL---CESVK---AALSASPATIFVLLDNHATH 80 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHH-HTCEE---CSSHH---HHHHHSSEEEECCSSHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-CCCee---cCCHH---HHHhcCCEEEEEeCCHHHHH
Confidence 3457899999999999999888899999999999999988888 67532 11221 12235799999888664344
Q ss_pred HHH-----HHhccCCEEEEeCCC
Q 018158 264 PIL-----ELLKVNGTLSVVGAP 281 (360)
Q Consensus 264 ~~~-----~~l~~~G~~v~~g~~ 281 (360)
.++ ..++++..+++.+..
T Consensus 81 ~v~~~~~l~~~~~g~ivid~st~ 103 (306)
T 3l6d_A 81 EVLGMPGVARALAHRTIVDYTTN 103 (306)
T ss_dssp HHHTSTTHHHHTTTCEEEECCCC
T ss_pred HHhcccchhhccCCCEEEECCCC
Confidence 433 234566666666543
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=96.05 E-value=0.012 Score=56.37 Aligned_cols=71 Identities=21% Similarity=0.275 Sum_probs=50.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHh-cCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQA-GKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~-~~~~~d~vid~~g~ 258 (360)
.+++++|+|+|++|.+++..+...|++|+++.|+.++.+.+.+.++.. ++...+ ... ....+|++++++|.
T Consensus 363 ~~k~vlV~GaGGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~~-~~~~~d---l~~~~~~~~DilVN~agv 434 (523)
T 2o7s_A 363 ASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGK-ALSLTD---LDNYHPEDGMVLANTTSM 434 (523)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC--CEETTT---TTTC--CCSEEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCc-eeeHHH---hhhccccCceEEEECCCC
Confidence 467899999999999999999999999999999998888777767642 222222 111 12358999999985
|
| >1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A* | Back alignment and structure |
|---|
Probab=96.05 E-value=0.0069 Score=54.70 Aligned_cols=90 Identities=19% Similarity=0.216 Sum_probs=64.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc---
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH--- 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~--- 260 (360)
.|+++.|+|.|.+|...++.++..|++|++.+++.++ ..... +|...+. +. .+.-...|+|+.++....
T Consensus 167 ~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~-~g~~~~~---~l---~ell~~aDvV~l~~P~t~~t~ 238 (347)
T 1mx3_A 167 RGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSD-GVERA-LGLQRVS---TL---QDLLFHSDCVTLHCGLNEHNH 238 (347)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCT-THHHH-HTCEECS---SH---HHHHHHCSEEEECCCCCTTCT
T ss_pred CCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcch-hhHhh-cCCeecC---CH---HHHHhcCCEEEEcCCCCHHHH
Confidence 5889999999999999999999999999999987654 23334 6753221 12 122335899988776421
Q ss_pred -cH-HHHHHHhccCCEEEEeCCC
Q 018158 261 -SL-GPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 261 -~~-~~~~~~l~~~G~~v~~g~~ 281 (360)
.+ ...+..|+++..+++++..
T Consensus 239 ~li~~~~l~~mk~gailIN~arg 261 (347)
T 1mx3_A 239 HLINDFTVKQMRQGAFLVNTARG 261 (347)
T ss_dssp TSBSHHHHTTSCTTEEEEECSCT
T ss_pred HHhHHHHHhcCCCCCEEEECCCC
Confidence 22 5667888888888888754
|
| >3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.0036 Score=55.98 Aligned_cols=88 Identities=19% Similarity=0.240 Sum_probs=61.8
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc---
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH--- 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~--- 260 (360)
.|+++.|+|.|.+|...++.++..|++|++.+++.+..+ ..+..+...+ ..+.-...|+|+.++....
T Consensus 136 ~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~------~~~~~~~~~~---l~ell~~aDvV~l~lPlt~~t~ 206 (324)
T 3evt_A 136 TGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPAD------HFHETVAFTA---TADALATANFIVNALPLTPTTH 206 (324)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCT------TCSEEEEGGG---CHHHHHHCSEEEECCCCCGGGT
T ss_pred cCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhH------hHhhccccCC---HHHHHhhCCEEEEcCCCchHHH
Confidence 588999999999999999999999999999998765322 1122222111 2223346888888776321
Q ss_pred --cHHHHHHHhccCCEEEEeCC
Q 018158 261 --SLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 261 --~~~~~~~~l~~~G~~v~~g~ 280 (360)
.....+..|+++..+++++.
T Consensus 207 ~li~~~~l~~mk~gailIN~aR 228 (324)
T 3evt_A 207 HLFSTELFQQTKQQPMLINIGR 228 (324)
T ss_dssp TCBSHHHHHTCCSCCEEEECSC
T ss_pred HhcCHHHHhcCCCCCEEEEcCC
Confidence 12567788888888888873
|
| >2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A* | Back alignment and structure |
|---|
Probab=96.04 E-value=0.061 Score=50.74 Aligned_cols=95 Identities=17% Similarity=0.210 Sum_probs=63.3
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHHH
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPI 265 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 265 (360)
.+|.|+|+|.+|...+..+...|.+|++.++++++.+.+.+..+...+....+.......-.+.|+||-++.....+..+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~v 85 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDAT 85 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHH
Confidence 45889999999999888888889999999999998888877442111222233322221123589999999875444544
Q ss_pred HH----HhccCCEEEEeCC
Q 018158 266 LE----LLKVNGTLSVVGA 280 (360)
Q Consensus 266 ~~----~l~~~G~~v~~g~ 280 (360)
++ .++++..+++.+.
T Consensus 86 l~~l~~~l~~g~iiId~s~ 104 (474)
T 2iz1_A 86 IKSLLPLLDIGDILIDGGN 104 (474)
T ss_dssp HHHHGGGCCTTCEEEECSC
T ss_pred HHHHHhhCCCCCEEEECCC
Confidence 44 4455666666543
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.012 Score=52.45 Aligned_cols=88 Identities=23% Similarity=0.244 Sum_probs=61.9
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHHH
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPI 265 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 265 (360)
.+|.|+|+|.+|...+..+...|.+|+++++++++.+.+.+ .|.. + ..+... .-...|+||.|+.....+..+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-~g~~-~--~~~~~~---~~~~~DvVi~av~~~~~~~~v 103 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQ-EGAR-L--GRTPAE---VVSTCDITFACVSDPKAAKDL 103 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHH-TTCE-E--CSCHHH---HHHHCSEEEECCSSHHHHHHH
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-cCCE-E--cCCHHH---HHhcCCEEEEeCCCHHHHHHH
Confidence 56999999999999888888889999999999998888877 6643 1 112211 123579999999855445554
Q ss_pred HH-------HhccCCEEEEeCC
Q 018158 266 LE-------LLKVNGTLSVVGA 280 (360)
Q Consensus 266 ~~-------~l~~~G~~v~~g~ 280 (360)
+. .++++..+++++.
T Consensus 104 ~~~~~~~~~~l~~~~~vv~~s~ 125 (316)
T 2uyy_A 104 VLGPSGVLQGIRPGKCYVDMST 125 (316)
T ss_dssp HHSTTCGGGGCCTTCEEEECSC
T ss_pred HcCchhHhhcCCCCCEEEECCC
Confidence 43 3456666666653
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=96.04 E-value=0.016 Score=52.16 Aligned_cols=92 Identities=22% Similarity=0.225 Sum_probs=61.9
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCh----hHHHHHHHH--cCCCeE-eeCccHHHHHhcCC--CcCEEEE
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSP----SKEKEAKEL--LGADEF-ILSTNAMQMQAGKR--TLDFILD 254 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~----~~~~~~~~~--~g~~~~-v~~~~~~~~~~~~~--~~d~vid 254 (360)
..+|||+|+ |.+|..+++.+...|.+|++++|++ ++.+.+.+. .+...+ .|..+.+.+...-. ++|+||.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~ 89 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS 89 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEE
Confidence 357999999 9999999999988999999999976 444433331 344322 34555555554444 8999999
Q ss_pred cCCCc--ccHHHHHHHhccCC---EEE
Q 018158 255 TVSAK--HSLGPILELLKVNG---TLS 276 (360)
Q Consensus 255 ~~g~~--~~~~~~~~~l~~~G---~~v 276 (360)
+++.. .....+++.++..| +++
T Consensus 90 ~a~~~n~~~~~~l~~aa~~~g~v~~~v 116 (346)
T 3i6i_A 90 TVGGESILDQIALVKAMKAVGTIKRFL 116 (346)
T ss_dssp CCCGGGGGGHHHHHHHHHHHCCCSEEE
T ss_pred CCchhhHHHHHHHHHHHHHcCCceEEe
Confidence 99853 22345666666544 555
|
| >3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X | Back alignment and structure |
|---|
Probab=96.04 E-value=0.13 Score=46.03 Aligned_cols=131 Identities=11% Similarity=0.079 Sum_probs=82.3
Q ss_pred EEEEEcCChHHHHHHHHHHHcC---CeEE-EEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFG---HHVT-VISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G---~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
++.|+|+|.+|...+..++..+ ++++ +.+++.++.+.+.+++|...++ .+.+.+-. ...+|+|+.|+....+.
T Consensus 4 rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~--~~~~~ll~-~~~vD~V~i~tp~~~H~ 80 (334)
T 3ohs_X 4 RWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAY--GSYEELAK-DPNVEVAYVGTQHPQHK 80 (334)
T ss_dssp EEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEE--SSHHHHHH-CTTCCEEEECCCGGGHH
T ss_pred EEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCccc--CCHHHHhc-CCCCCEEEECCCcHHHH
Confidence 6889999999998777776653 3544 5567777777777768864443 22222211 35799999999988778
Q ss_pred HHHHHHhccCCEEEEeCCCCCCcccChh------hH-hccCcE-EEEeecCCHHHHHHHHHHHhcCCCcc
Q 018158 263 GPILELLKVNGTLSVVGAPEAPFELPSF------PL-IFGKRS-VKGSMTGGMRETQEMMNVCGKYNITC 324 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~------~~-~~~~~~-i~~~~~~~~~~~~~~~~~l~~~~l~~ 324 (360)
..+..+++.|-+ |.+-. ++..+.. .+ -.+++. ..+........++.+.+++.+|.+-.
T Consensus 81 ~~~~~al~~Gkh-Vl~EK---P~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~ 146 (334)
T 3ohs_X 81 AAVMLCLAAGKA-VLCEK---PMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVLAQGTLGD 146 (334)
T ss_dssp HHHHHHHHTTCE-EEEES---SSSSSHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHHHHTTTCS
T ss_pred HHHHHHHhcCCE-EEEEC---CCCCCHHHHHHHHHHHHHhCCEEEEEEhHhcCHHHHHHHHHHhcCCCCC
Confidence 888888888754 44433 2222221 11 122333 33444433456788888888887743
|
| >3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.03 E-value=0.026 Score=45.78 Aligned_cols=93 Identities=20% Similarity=0.263 Sum_probs=63.6
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCC----
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSA---- 258 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~---- 258 (360)
+++.+||-+|+| .|..+..+++. |.+|++++.+++..+.+++++....++..+-. ........+|+|+.....
T Consensus 45 ~~~~~vLdiG~G-~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~~D~i~~~~~~~~~~ 121 (195)
T 3cgg_A 45 PRGAKILDAGCG-QGRIGGYLSKQ-GHDVLGTDLDPILIDYAKQDFPEARWVVGDLS-VDQISETDFDLIVSAGNVMGFL 121 (195)
T ss_dssp CTTCEEEEETCT-TTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCTTSEEEECCTT-TSCCCCCCEEEEEECCCCGGGS
T ss_pred cCCCeEEEECCC-CCHHHHHHHHC-CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccc-cCCCCCCceeEEEECCcHHhhc
Confidence 388999999996 36667777776 88999999999999998885543333322211 111113579999965221
Q ss_pred -----cccHHHHHHHhccCCEEEEe
Q 018158 259 -----KHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 259 -----~~~~~~~~~~l~~~G~~v~~ 278 (360)
...+..+.+.|+++|.++..
T Consensus 122 ~~~~~~~~l~~~~~~l~~~G~l~~~ 146 (195)
T 3cgg_A 122 AEDGREPALANIHRALGADGRAVIG 146 (195)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ChHHHHHHHHHHHHHhCCCCEEEEE
Confidence 23467788999999998765
|
| >3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.03 E-value=0.019 Score=47.14 Aligned_cols=93 Identities=15% Similarity=0.111 Sum_probs=64.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCC-----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSA----- 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~----- 258 (360)
.+.+||-+|+|. |..+..+++. |.+|++++.+++..+.+++++....++.. +..........+|+|+....-
T Consensus 41 ~~~~vLDiGcG~-G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~-d~~~~~~~~~~fD~v~~~~~l~~~~~ 117 (203)
T 3h2b_A 41 VDGVILDVGSGT-GRWTGHLASL-GHQIEGLEPATRLVELARQTHPSVTFHHG-TITDLSDSPKRWAGLLAWYSLIHMGP 117 (203)
T ss_dssp CCSCEEEETCTT-CHHHHHHHHT-TCCEEEECCCHHHHHHHHHHCTTSEEECC-CGGGGGGSCCCEEEEEEESSSTTCCT
T ss_pred CCCeEEEecCCC-CHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhCCCCeEEeC-cccccccCCCCeEEEEehhhHhcCCH
Confidence 478899999853 6666666666 88999999999999999885443333322 222222235679999974421
Q ss_pred ---cccHHHHHHHhccCCEEEEeC
Q 018158 259 ---KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 259 ---~~~~~~~~~~l~~~G~~v~~g 279 (360)
...+..+.+.|+++|.++..-
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~i~~ 141 (203)
T 3h2b_A 118 GELPDALVALRMAVEDGGGLLMSF 141 (203)
T ss_dssp TTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEE
Confidence 234788889999999998664
|
| >1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Probab=96.02 E-value=0.015 Score=49.31 Aligned_cols=95 Identities=19% Similarity=0.076 Sum_probs=62.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeEeeCccHHHH-Hhc-CCCcCEEEE-cCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEFILSTNAMQM-QAG-KRTLDFILD-TVS 257 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~v~~~~~~~~-~~~-~~~~d~vid-~~g 257 (360)
++.+||-+|+|. |..+..+++....+|++++.+++.++.++++. +..-.+...+.... ... ...+|+|+. +.+
T Consensus 60 ~~~~vLDiGcGt-G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~ 138 (236)
T 1zx0_A 60 KGGRVLEVGFGM-AIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp TCEEEEEECCTT-SHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred CCCeEEEEeccC-CHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCcc
Confidence 788999999963 66667776544448999999999988888854 22111222222222 122 467999987 332
Q ss_pred C----c------ccHHHHHHHhccCCEEEEeC
Q 018158 258 A----K------HSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 258 ~----~------~~~~~~~~~l~~~G~~v~~g 279 (360)
. . ..+..+.+.|++||+++.+.
T Consensus 139 ~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 139 LSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred cchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 1 1 12678899999999998763
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=96.01 E-value=0.011 Score=53.67 Aligned_cols=75 Identities=19% Similarity=0.174 Sum_probs=50.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHH--cCCeEEEEeCChhHHHH----------HHHHcC--CC-eEeeCccHHHHHhc-C
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKA--FGHHVTVISTSPSKEKE----------AKELLG--AD-EFILSTNAMQMQAG-K 246 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~--~G~~V~~~~~~~~~~~~----------~~~~~g--~~-~~v~~~~~~~~~~~-~ 246 (360)
.+++|||+|+ |.+|..+++.+.. .|++|++++++...... .....+ .. ...|..+.+..... .
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 88 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEK 88 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhc
Confidence 5789999999 9999998888888 89999999986541110 001011 11 11244455555555 6
Q ss_pred CCcCEEEEcCCC
Q 018158 247 RTLDFILDTVSA 258 (360)
Q Consensus 247 ~~~d~vid~~g~ 258 (360)
.++|+||++++.
T Consensus 89 ~~~D~vih~A~~ 100 (362)
T 3sxp_A 89 LHFDYLFHQAAV 100 (362)
T ss_dssp SCCSEEEECCCC
T ss_pred cCCCEEEECCcc
Confidence 789999999984
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 360 | ||||
| d1piwa1 | 192 | b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy | 2e-29 | |
| d1uufa1 | 179 | b.35.1.2 (A:3-144,A:313-349) Hypothetical protein | 8e-25 | |
| d1uufa2 | 168 | c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc | 1e-23 | |
| d2fzwa1 | 197 | b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase | 5e-22 | |
| d1piwa2 | 168 | c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase | 5e-20 | |
| d1llua1 | 175 | b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase | 6e-20 | |
| d1cdoa1 | 199 | b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase | 1e-19 | |
| d1kola1 | 201 | b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog | 3e-18 | |
| d1e3ia1 | 202 | b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase | 3e-18 | |
| d1vj0a1 | 184 | b.35.1.2 (A:2-155,A:338-367) Hypothetical protein | 6e-17 | |
| d1f8fa1 | 194 | b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr | 6e-16 | |
| d1pl8a1 | 185 | b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor | 8e-15 | |
| d1llua2 | 166 | c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom | 1e-13 | |
| d1p0fa1 | 198 | b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro | 2e-13 | |
| d1h2ba2 | 172 | c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo | 3e-13 | |
| d2jhfa1 | 198 | b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase | 3e-13 | |
| d1rjwa1 | 171 | b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase | 5e-13 | |
| d1e3ja1 | 178 | b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor | 8e-13 | |
| d1vj0a2 | 182 | c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T | 2e-12 | |
| d1jqba1 | 177 | b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon | 4e-12 | |
| d1f8fa2 | 174 | c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase { | 5e-12 | |
| d1h2ba1 | 171 | b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas | 7e-12 | |
| d1jvba1 | 177 | b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase | 2e-11 | |
| d1rjwa2 | 168 | c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu | 3e-10 | |
| d1jqba2 | 174 | c.2.1.1 (A:1140-1313) Bacterial secondary alcohol | 5e-10 | |
| d2jhfa2 | 176 | c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse ( | 1e-09 | |
| d1e3ia2 | 174 | c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse ( | 1e-09 | |
| d1cdoa2 | 175 | c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga | 2e-09 | |
| d1p0fa2 | 174 | c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog | 3e-09 | |
| d2fzwa2 | 176 | c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human ( | 9e-09 | |
| d1d1ta2 | 176 | c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human ( | 4e-08 | |
| d1jvba2 | 170 | c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo | 1e-07 | |
| d1tt7a1 | 162 | b.35.1.2 (A:2-127,A:295-330) Hypothetical protein | 3e-06 | |
| d1iz0a1 | 131 | b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase | 2e-05 | |
| d1xa0a1 | 152 | b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo | 5e-05 | |
| d1o89a1 | 146 | b.35.1.2 (A:1-115,A:293-323) Hypothetical protein | 9e-05 | |
| d1e3ja2 | 170 | c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh | 1e-04 | |
| d1iz0a2 | 171 | c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus | 9e-04 |
| >d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 109 bits (274), Expect = 2e-29
Identities = 55/160 (34%), Positives = 79/160 (49%), Gaps = 4/160 (2%)
Query: 14 GWAAHDPSGKITPYI--FKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGH 71
G A P + + +D+ IKI CG+C +DIH WG P+V GH
Sbjct: 9 GIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGH 68
Query: 72 EITGIITKVGSNVK-NFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDG 130
EI G + K+G KVG R VG +C+EC+ CK+ E YC K TY+ + DG
Sbjct: 69 EIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDG 128
Query: 131 SITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITV 170
++ GGY+ + FVV +PENI ++ + AG+
Sbjct: 129 YVSQGGYANYVRVHEHFVVPIPENIWVETLP-VGEAGVHE 167
|
| >d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Score = 97.3 bits (241), Expect = 8e-25
Identities = 64/157 (40%), Positives = 89/157 (56%), Gaps = 2/157 (1%)
Query: 16 AAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITG 75
A+ + P RRE G NDV I+I YCG+CH+D+H V+++W T+YP VPGHEI G
Sbjct: 5 GAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVG 64
Query: 76 IITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWD-GSITY 134
+ VG V+ + GD VGC+ +C CE C+D ENYCD + TYN D T
Sbjct: 65 RVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTL 124
Query: 135 GGYSEMLVADYRFVVHVPE-NIAMDAAAPLLCAGITV 170
GGYS+ +V R+V+ + +I M A + A +
Sbjct: 125 GGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERM 161
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Score = 94.3 bits (233), Expect = 1e-23
Identities = 77/174 (44%), Positives = 111/174 (63%), Gaps = 7/174 (4%)
Query: 150 HVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH 209
H E +A A APLLCAGIT + P++ K++G+VG+GGLGH+ +K A G
Sbjct: 1 HPQEQLA--AVAPLLCAGITTYSPLRHWQA---GPGKKVGVVGIGGLGHMGIKLAHAMGA 55
Query: 210 HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPILELL 269
HV T+ ++EA + LGADE + S NA +M A ++ DFIL+TV+A H+L LL
Sbjct: 56 HVVAF-TTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLL 114
Query: 270 KVNGTLSVVGAPEAPFELPS-FPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNI 322
K +GT+++VGAP P + P F LI +R++ GSM GG+ ETQEM++ C ++ I
Sbjct: 115 KRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGI 168
|
| >d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 90.3 bits (223), Expect = 5e-22
Identities = 37/168 (22%), Positives = 61/168 (36%), Gaps = 15/168 (8%)
Query: 17 AHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGI 76
A + ++ + ++V IKI+ +CHTD + + +PV+ GH GI
Sbjct: 12 AWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGI 71
Query: 77 ITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITY-- 134
+ VG V K GD + C EC+FC + + N C KI+ T +
Sbjct: 72 VESVGEGVTKLKAGDT-VIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFT 130
Query: 135 ------------GGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITV 170
+SE V V + I +D + +
Sbjct: 131 CKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEI 178
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 83.9 bits (206), Expect = 5e-20
Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 7/171 (4%)
Query: 155 IAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVI 214
I AAPLLC G+TV+ P+ N K++GIVGLGG+G + KA T +
Sbjct: 1 IPSHLAAPLLCGGLTVYSPLVRNGC---GPGKKVGIVGLGGIGSMGTLISKAM-GAETYV 56
Query: 215 STSPSKEKEAKELLGADEFILSTN---AMQMQAGKRTLDFILDTVSAKHSLGPILELLKV 271
+ S+++E +GAD +I + + L + + + + +KV
Sbjct: 57 ISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKV 116
Query: 272 NGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNI 322
G + + PE L P S+ S G ++E +++ + + +I
Sbjct: 117 GGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKDI 167
|
| >d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 83.8 bits (206), Expect = 6e-20
Identities = 50/173 (28%), Positives = 72/173 (41%), Gaps = 11/173 (6%)
Query: 4 TTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGIT 63
T P ++ V H + K G V +KI G+CHTD+H + DW +
Sbjct: 1 TLPQTMKAAV---VHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVK 57
Query: 64 MY-PVVPGHEITGIITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFT 122
P +PGHE G + VGS V K GDR + L AC CE C E C+ Q T
Sbjct: 58 PPLPFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNT 117
Query: 123 YNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMK 175
+ Y+E ++AD +V +P+N+ L + M+
Sbjct: 118 GYSVNGG-------YAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQMR 163
|
| >d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Score = 83.8 bits (206), Expect = 1e-19
Identities = 37/169 (21%), Positives = 67/169 (39%), Gaps = 15/169 (8%)
Query: 17 AHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGI 76
A + + + + N++ IKI+ G+CHTD++H+ +PVV GHE GI
Sbjct: 14 AWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGI 73
Query: 77 ITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWD------- 129
+ VG V F+ G++ + + C EC FC+ + N C K +
Sbjct: 74 VESVGPGVTEFQPGEK-VIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFT 132
Query: 130 -------GSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVF 171
+ +S+ V + V + ++ +D +V
Sbjct: 133 CKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVN 181
|
| >d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Score = 79.9 bits (196), Expect = 3e-18
Identities = 28/183 (15%), Positives = 50/183 (27%), Gaps = 14/183 (7%)
Query: 31 RRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVG 90
R + + V +K++ IC +D H V+ T +
Sbjct: 27 RGKKIEHGVILKVVSTNICGSDQHMVRGRT--TAQVGLVLGHEITGEVIEKGRDVENLQI 84
Query: 91 DRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFW---DGSITYGGYSEMLVADY-- 145
AC C CK+ C + G + D GG +E ++ Y
Sbjct: 85 GDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYAD 144
Query: 146 RFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGK 205
++ +P+ + + D A + G G + K
Sbjct: 145 FNLLKLPDRDKAMEKINIAEVVGVQVISLDD-------APRGYGEFDAGVPKKFVIDPHK 197
Query: 206 AFG 208
F
Sbjct: 198 TFS 200
|
| >d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Score = 79.9 bits (196), Expect = 3e-18
Identities = 36/172 (20%), Positives = 61/172 (35%), Gaps = 20/172 (11%)
Query: 17 AHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGI 76
A + + +V I+++ +C TD + + ++PVV GHE GI
Sbjct: 14 AWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTD-INATDPKKKALFPVVLGHECAGI 72
Query: 77 ITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQ---------------- 120
+ VG V NFK GD+ + A C C+ C N C K++
Sbjct: 73 VESVGPGVTNFKPGDKV-IPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRT 131
Query: 121 --FTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITV 170
FT G + +S+ V + V + +D ++
Sbjct: 132 SRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPFESI 183
|
| >d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Score = 75.6 bits (185), Expect = 6e-17
Identities = 33/161 (20%), Positives = 61/161 (37%), Gaps = 9/161 (5%)
Query: 17 AHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGI 76
+ + F+ + + ++IL G+C +D+H + + P++ GHE G
Sbjct: 10 LEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGR 69
Query: 77 ITKVGSNVKNFKVGD----RAAVGCLAAACMECEFCKDSQENYCDKIQ--FTYNGIFWDG 130
+ +V ++ V C EC +CK S+E Y + + N +
Sbjct: 70 VVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEY 129
Query: 131 SITYGGYSE-MLVADYRFVVHVPENIAMDAAAPLLCAGITV 170
G YS +++ V+ V E I PL A +
Sbjct: 130 PHLRGCYSSHIVLDPETDVLKVSEKI--THRLPLKEANKAL 168
|
| >d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Score = 73.4 bits (179), Expect = 6e-16
Identities = 34/195 (17%), Positives = 58/195 (29%), Gaps = 46/195 (23%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94
++V +K++ G+CHTD V++ P V GHE +GII +G NV +VGD
Sbjct: 27 QGDEVLVKVVATGMCHTD-LIVRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVV 85
Query: 95 VGCLAAACMECEFCKDSQENYCDKIQFTY----------------NGIFWDGSITYGGYS 138
+ C +C C YC + G+ D ++
Sbjct: 86 LSY--GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFA 143
Query: 139 EMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGH 198
++ V V ++ D +
Sbjct: 144 TYALSRENNTVKVTKDFPFDQLVKFYAF---------------------------DEINQ 176
Query: 199 VAVKFGKAFGHHVTV 213
A+ K +
Sbjct: 177 AAIDSRKGITLKPII 191
|
| >d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.9 bits (170), Expect = 8e-15
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITM---YPVVPGHEITGIITKVGSNVKNFKVGD 91
G N+V +++ GIC +D+H+ + P+V GHE +G + KVGS+VK+ K GD
Sbjct: 30 GPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGD 89
Query: 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV 151
R A+ A EFCK + N + F G + F +
Sbjct: 90 RVAI-EPGAPRENDEFCKMGRYNLS------PSIFFCATPPDDGNLCRFYKHNAAFCYKL 142
Query: 152 PENIAMDAAAPL-LCAGITVFCPMK 175
P+N+ L + F K
Sbjct: 143 PDNVKPLVTHRFPLEKALEAFETFK 167
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 65.9 bits (159), Expect = 1e-13
Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 155 IAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVI 214
+ AP+LCAG+TV+ +K N + + I G+GGLGHVAV++ +A G HV I
Sbjct: 1 VEFAEIAPILCAGVTVYKGLKQTNA---RPGQWVAISGIGGLGHVAVQYARAMGLHVAAI 57
Query: 215 STSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLD---FILDTVSAKHSLGPILELLKV 271
+ E LGA + + ++A +R + +L T + + G + + +
Sbjct: 58 DIDD-AKLELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARR 116
Query: 272 NGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGK 319
GT+++VG P F P F ++ + GS+ G + QE ++ G+
Sbjct: 117 GGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEALDFAGE 164
|
| >d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Score = 66.1 bits (160), Expect = 2e-13
Identities = 40/196 (20%), Positives = 66/196 (33%), Gaps = 28/196 (14%)
Query: 17 AHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGI 76
A +P ++ ++V IKIL GIC +D V + + +PV+ GHE G+
Sbjct: 14 AWEPHKPLSLETITVAPPKAHEVRIKILASGICGSD-SSVLKEIIPSKFPVILGHEAVGV 72
Query: 77 ITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQ--------------FT 122
+ +G+ V K GD+ + C C CK S N+C+K FT
Sbjct: 73 VESIGAGVTCVKPGDKV-IPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFT 131
Query: 123 YNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCPMKDNNLIDS 182
G + ++E V V + I ++ +
Sbjct: 132 CRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKLTLDQI------------ 179
Query: 183 PAKKRIGIVGLGGLGH 198
+ G G
Sbjct: 180 NKAFELLSSGQGVRSI 195
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Score = 65.0 bits (157), Expect = 3e-13
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 6/160 (3%)
Query: 160 AAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS 219
APL AGIT + +K P + IVG+GGLGH+AV+ K +
Sbjct: 9 MAPLADAGITAYRAVKKAARTLYP-GAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKE 67
Query: 220 KEKEAKELLGADEFILSTN----AMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTL 275
++ + E LGAD + + + R ++ +D V ++ ++ LL G L
Sbjct: 68 EKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRL 127
Query: 276 SVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMN 315
+VG P+ +I + S +GS+ G E E++
Sbjct: 128 IIVGYGGELRF-PTIRVISSEVSFEGSLVGNYVELHELVT 166
|
| >d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Score = 65.6 bits (159), Expect = 3e-13
Identities = 34/152 (22%), Positives = 54/152 (35%), Gaps = 18/152 (11%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94
++V IK++ GIC +D H V + + HE GI+ +G V + GD+
Sbjct: 32 KAHEVRIKMVATGICRSDDHVVSGTLVTPLPVIAG-HEAAGIVESIGEGVTTVRPGDKVI 90
Query: 95 VGCLAAACMECEFCKDSQENYCDKIQFT-YNGIFWD-------------GSITYGGYSEM 140
C +C CK + N+C K + G D + +S+
Sbjct: 91 P-LFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQY 149
Query: 141 LVADYRFVVHVPENIAMD--AAAPLLCAGITV 170
V D V + A+D L I
Sbjct: 150 TVVDEISVAKIDAAFALDPLITHVLPFEKINE 181
|
| >d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Score = 64.2 bits (155), Expect = 5e-13
Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 18 HDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVP-GHEITGI 76
+ ++ +V ++I CG+CHTD+H DW + + GHE GI
Sbjct: 7 EQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGI 66
Query: 77 ITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGG 136
+ +VG V + KVGDR + L +AC C++C QE C G GG
Sbjct: 67 VEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLC-------EHQKNAGYSVDGG 119
Query: 137 YSEMLVADYRFVVHVPENIAMDAAAPLLCAGITV 170
Y+E A +VV +P+N ++ PL
Sbjct: 120 YAEYCRAAADYVVKIPDNTIIE-VQPLEKINEVF 152
|
| >d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Score = 63.9 bits (154), Expect = 8e-13
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 10/144 (6%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWG---ITMYPVVPGHEITGIITKVGSNVKNFKVGD 91
++V +++ Y GIC +D+H+ ++ I P+V GHE +G + KVG NVK+ K GD
Sbjct: 24 KEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGD 83
Query: 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV 151
R AV C C+FCK+ + N C + F Y + F +
Sbjct: 84 RVAVEP-GVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVH------AADFCHKL 136
Query: 152 PENIAMDAAAPLLCAGITVFCPMK 175
P+N + +
Sbjct: 137 PDNCNVKQLVTHSFKLEQTVDAFE 160
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Score = 63.0 bits (152), Expect = 2e-12
Identities = 37/174 (21%), Positives = 65/174 (37%), Gaps = 13/174 (7%)
Query: 157 MDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVIST 216
+D A +C+G T + + +S A K + I G G LG V ++ G ++
Sbjct: 3 LDVLAMAMCSGATAYHAFDE--YPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIA 60
Query: 217 SPSKEKEAKELLGADEFILSTNAMQMQAGKRTL--------DFILDTVSAKHSLGPILEL 268
+ E +GAD + + K + DFIL+ +L EL
Sbjct: 61 GSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSEL 120
Query: 269 LKVNGTLSVVG--APEAPFELPSFPLIFGKR-SVKGSMTGGMRETQEMMNVCGK 319
L+ G SV G P+ P + + K + KG + +++ +
Sbjct: 121 LRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSR 174
|
| >d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Score = 61.9 bits (149), Expect = 4e-12
Identities = 30/167 (17%), Positives = 58/167 (34%), Gaps = 16/167 (9%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94
G D ++ L C +DIH V ++ GHE G + +VGS VK+FK GDR
Sbjct: 23 GSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGDRVI 82
Query: 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPEN 154
V C + + + + + +G Y + AD + +P++
Sbjct: 83 VPCT-TPDWRSLEVQAGFQQHSNGMLA-GWKFSNFKDGVFGEYFHVNDAD-MNLAILPKD 139
Query: 155 IAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAV 201
+ + + G ++ + ++ +
Sbjct: 140 VDLSKLVTHVYHGFDH-------------IEEALLLMKDKPKDLIKA 173
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Score = 61.8 bits (149), Expect = 5e-12
Identities = 32/165 (19%), Positives = 61/165 (36%), Gaps = 8/165 (4%)
Query: 155 IAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVI 214
+ ++ PL C T N + G G +G A+ K G + +
Sbjct: 1 VPIELLGPLGCGIQTGAGACI--NALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIA 58
Query: 215 STSPSKEKEAKELLGADEFILSTN----AMQMQAGKRTLDFILDTVSAKHSLGPILELLK 270
E + LGA I S A + ++F L++ + L ++ L
Sbjct: 59 VDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALG 118
Query: 271 VNGTLSVVGAPEAP--FELPSFPLIFGKRSVKGSMTGGMRETQEM 313
+ G ++VVGAP+ + L+ G +++ G + G + +
Sbjct: 119 ILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFI 163
|
| >d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Score = 61.2 bits (147), Expect = 7e-12
Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 11/140 (7%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVG---SNVKNFKVGD 91
G DV ++I G+CHTD+H V+ W + P +P + + V+ + GD
Sbjct: 24 GRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGD 83
Query: 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHV 151
+ A C C+ ++ +C+ ++F G GG++E + +R V+ +
Sbjct: 84 PV-ILHPAVTDGTCLACRAGEDMHCENLEFP-------GLNIDGGFAEFMRTSHRSVIKL 135
Query: 152 PENIAMDAAAPLLCAGITVF 171
P+++ ++ L V
Sbjct: 136 PKDVRVEVDIHKLDEINDVL 155
|
| >d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Score = 59.6 bits (143), Expect = 2e-11
Identities = 41/161 (25%), Positives = 63/161 (39%), Gaps = 23/161 (14%)
Query: 35 GVNDVTIKILYCGICHTDIHHVKNDWGITM--------YPVVPGHEITGIITKVGSNVKN 86
V IK+ G+CH+D+H + +G PV GHEI G I +VG V
Sbjct: 24 KGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVG 83
Query: 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSE-MLVADY 145
+ GD AV C +C+ +E+ CD + W G G Y+E ++V Y
Sbjct: 84 YSKGDLVAVNPWQGEGN-CYYCRIGEEHLCDSPR-------WLGINFDGAYAEYVIVPHY 135
Query: 146 RFVVHVPENIAMDAAAPLL------CAGITVFCPMKDNNLI 180
+++ + M L + F + LI
Sbjct: 136 KYMYKLRRVKPMITKTMKLEEANEAIDNLENFKAIGRQVLI 176
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Score = 56.7 bits (135), Expect = 3e-10
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 5/170 (2%)
Query: 155 IAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVI 214
++ + AAP+ CAG+T + +K + + I G+GGLGHVAV++ KA G +V +
Sbjct: 1 LSFEEAAPIFCAGVTTYKALKVTGA---KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAV 57
Query: 215 STSPSKEKEAKELLGADEFILSTNAMQMQAGKRT--LDFILDTVSAKHSLGPILELLKVN 272
K + AKEL ++ + + T +K + ++
Sbjct: 58 DIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRG 117
Query: 273 GTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYNI 322
G +VG P +P F + + GS+ G ++ QE + + +
Sbjct: 118 GACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKV 167
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Score = 55.7 bits (133), Expect = 5e-10
Identities = 25/169 (14%), Positives = 61/169 (36%), Gaps = 12/169 (7%)
Query: 155 IAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVI 214
+ ++ A + T F + ++ + ++G+G +G + + K G +
Sbjct: 1 MPLENAVMITDMMTTGFHGAELADI---EMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIG 57
Query: 215 STSPSKEKEAKELLGADEFILSTNAMQMQ-----AGKRTLDFILDTVSAKHSLGPILELL 269
S EA + GA + + N + +D ++ +L ++++
Sbjct: 58 VGSRPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMV 117
Query: 270 KVNGTLSVVGAPEAPFELP----SFPLIFGKRSVKGSMTGGMRETQEMM 314
K G +S + + L + +++KG + G R E +
Sbjct: 118 KPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAERL 166
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Score = 54.6 bits (130), Expect = 1e-09
Identities = 25/172 (14%), Positives = 60/172 (34%), Gaps = 10/172 (5%)
Query: 157 MDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVIST 216
++ + C T + + + GLGG+G + KA G +
Sbjct: 3 LEKVCLIGCGFSTGYGSAV--KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVD 60
Query: 217 SPSKEKEAKELLGADEFILSTN------AMQMQAGKRTLDFILDTVSAKHSLGPILELLK 270
+ + +GA E + + + + +DF + + ++ L +
Sbjct: 61 INKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQ 120
Query: 271 VNGTLSVV--GAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKY 320
+SV+ P++ + L+ R+ KG++ GG + + + +
Sbjct: 121 EAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADF 172
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Score = 54.6 bits (130), Expect = 1e-09
Identities = 31/174 (17%), Positives = 59/174 (33%), Gaps = 16/174 (9%)
Query: 157 MDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVI-S 215
++ + C + + N + GLG +G A+ K G +
Sbjct: 3 LERVCLIGCGFSSGYGAAI--NTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAID 60
Query: 216 TSPSKEKEAKEL--------LGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPILE 267
+ K +AK L D+ + G +D+ LD +L ++
Sbjct: 61 INGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGG---VDYSLDCAGTAQTLKAAVD 117
Query: 268 LLKVNGTLSV-VGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKY 320
+ VGA +P+ +I G+ S+ G+ GG + + N+ Y
Sbjct: 118 CTVLGWGSCTVVGAKVDEMTIPTVDVILGR-SINGTFFGGWKSVDSVPNLVSDY 170
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Score = 54.3 bits (129), Expect = 2e-09
Identities = 32/164 (19%), Positives = 55/164 (33%), Gaps = 9/164 (5%)
Query: 157 MDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVIST 216
+D L C T F + + P + A + +
Sbjct: 3 LDTVCLLGCGVSTGFGAAVNTAKV-EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDL 61
Query: 217 SPSKEKEAKELLGADEFILSTN------AMQMQAGKRTLDFILDTVSAKHSLGPILEL-L 269
+P K ++AK GA +F+ + + + +DF L+ V + LE L
Sbjct: 62 NPDKFEKAKV-FGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCL 120
Query: 270 KVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEM 313
K G +VG + + R+ KGSM GG + +
Sbjct: 121 KGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGFKGKDGV 164
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Score = 53.7 bits (128), Expect = 3e-09
Identities = 31/166 (18%), Positives = 56/166 (33%), Gaps = 12/166 (7%)
Query: 160 AAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS 219
+ + C T + N + GLGG+G A+ KA G + +
Sbjct: 5 SCLIGCGFATGYGAAV--NTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHK 62
Query: 220 KEKEAKELLGADEFILSTN-------AMQMQAGKRTLDFILDTVSAKHSLGPILELLKVN 272
+ LGA E + + + + + + + + +
Sbjct: 63 DKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGS 122
Query: 273 GTLSVVGAPEAPFELPSFPLIFGK-RSVKGSMTGG--MRETQEMMN 315
G V+G LP PL+ RS+KGS+ GG E +++
Sbjct: 123 GVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKGEEVSRLVD 168
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 52.3 bits (124), Expect = 9e-09
Identities = 28/166 (16%), Positives = 49/166 (29%), Gaps = 10/166 (6%)
Query: 157 MDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVIST 216
+D L C T + + + P G V + A + +
Sbjct: 3 LDKVCLLGCGISTGYGAAVNTAKL-EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDI 61
Query: 217 SPSKEKEAKELLGADEFILSTNAMQMQAGKRTL------DFILDTVSAKHSLGPILELLK 270
+ K AKE GA E I + + D+ + + + LE
Sbjct: 62 NKDKFARAKE-FGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACH 120
Query: 271 VNGTLSVVG--APEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMM 314
+SVV A + R+ KG+ GG + + +
Sbjct: 121 KGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVP 166
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 50.2 bits (119), Expect = 4e-08
Identities = 28/165 (16%), Positives = 53/165 (32%), Gaps = 10/165 (6%)
Query: 157 MDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVIST 216
+ + C T + + GLGG+G + K+ G +
Sbjct: 4 PEKVCLIGCGFSTGYGAAV--KTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGID 61
Query: 217 SPSKEKEAKELLGADEFILSTNA-------MQMQAGKRTLDFILDTVSAKHSLGPILELL 269
+ E +GA E I ++ + G + + +
Sbjct: 62 LNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCH 121
Query: 270 KVNGTLSVVGAPEAPFELPSFPLIFGK-RSVKGSMTGGMRETQEM 313
GT VVG P + L P++ R+ KG + GG++ ++
Sbjct: 122 MNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDV 166
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Score = 49.0 bits (115), Expect = 1e-07
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 7/161 (4%)
Query: 160 AAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS 219
AAPL C+GIT + ++ +L P K + + GGLG +AV+ KA +
Sbjct: 6 AAPLTCSGITTYRAVRKASL--DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVRE 63
Query: 220 KEKEAKELLGADEFILSTNAMQMQAGKR-----TLDFILDTVSAKHSLGPILELLKVNGT 274
+ EA + GAD I ++ + +R +D ++D +++ +L + L G
Sbjct: 64 EAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGK 123
Query: 275 LSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMMN 315
+VG A + + + GS+ G + +M
Sbjct: 124 YVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMR 164
|
| >d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Score = 44.5 bits (104), Expect = 3e-06
Identities = 25/166 (15%), Positives = 42/166 (25%), Gaps = 35/166 (21%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
+ V IK+ Y GI + D K I +
Sbjct: 31 DGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILG------------------------- 65
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIA 156
S + + + G GG SE ++V +P+N++
Sbjct: 66 -----IDAAGTVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLS 120
Query: 157 MDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVK 202
+ A I ++ I+ G V VK
Sbjct: 121 LKEAMVDQLLTIVDR-----EVSLEETPGALKDILQNRIQGRVIVK 161
|
| >d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Score = 41.7 bits (97), Expect = 2e-05
Identities = 8/75 (10%), Positives = 19/75 (25%)
Query: 102 CMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAA 161
++ G + + GG +E + ++ +PE +
Sbjct: 46 LGAYLTRLHPPFIPGMEVVGVVEGRRYAALVPQGGLAERVAVPKGALLPLPEGRPVVGPV 105
Query: 162 PLLCAGITVFCPMKD 176
F + D
Sbjct: 106 FPFAEAEAAFRALLD 120
|
| >d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Score = 41.0 bits (95), Expect = 5e-05
Identities = 21/138 (15%), Positives = 38/138 (27%), Gaps = 31/138 (22%)
Query: 33 ENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDR 92
+ DV +++ Y + + D D + I V S F+ GD
Sbjct: 27 DLPEGDVLVRVHYSSVNYKDGLASIPDG-KIVKTYPFVPGIDLAGVVVSSQHPRFREGDE 85
Query: 93 AAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVP 152
+ G +GGYSE ++V +P
Sbjct: 86 VIATG-----------------------------YEIGVTHFGGYSEYARLHGEWLVPLP 116
Query: 153 ENIAMDAAAPLLCAGITV 170
+ + A + A +
Sbjct: 117 KGLERIAQE-ISLAELPQ 133
|
| >d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Score = 39.9 bits (92), Expect = 9e-05
Identities = 14/133 (10%), Positives = 32/133 (24%), Gaps = 30/133 (22%)
Query: 37 NDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAAVG 96
DVT+ + + + + D + I +
Sbjct: 28 GDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPG------------------------- 62
Query: 97 CLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIA 156
+ S++ Q + G +GG +E ++V +P+ A
Sbjct: 63 -----IDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGQA 117
Query: 157 MDAAAPLLCAGIT 169
+
Sbjct: 118 AKEISLSEAPNFA 130
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Score = 40.0 bits (92), Expect = 1e-04
Identities = 24/171 (14%), Positives = 54/171 (31%), Gaps = 19/171 (11%)
Query: 155 IAMDAAA---PLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHV 211
++++ A PL + ++G G +G V+V KA+G V
Sbjct: 1 VSLEEGALLEPLSVGVHAC-------RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFV 53
Query: 212 TVISTSPSKEKEAKELLGADEFILSTNAMQMQA--------GKRTLDFILDTVSAKHSLG 263
+ SP + + AK ++ + + + +D + +
Sbjct: 54 VCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCIT 113
Query: 264 PILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQEMM 314
+ + + GTL +VG +P + +K + +
Sbjct: 114 IGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVF-RYCNDYPIAL 163
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Score = 37.4 bits (85), Expect = 9e-04
Identities = 26/161 (16%), Positives = 53/161 (32%), Gaps = 6/161 (3%)
Query: 155 IAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVI 214
++ + AA + +T + +K +++ + G A +
Sbjct: 1 LSPEEAAAFPVSFLTAYLALKRAQA---RPGEKVLVQAAAGALGTAAVQVARAMGLRVLA 57
Query: 215 STSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGT 274
+ S ++ LGA+E + LD +L+ + L LL G
Sbjct: 58 AASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRG--KEVEESLGLLAHGGR 115
Query: 275 LSVVGAPE-APFELPSFPLIFGKRSVKGSMTGGMRETQEMM 314
L +GA E +P L+ +V G + ++
Sbjct: 116 LVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALV 156
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 360 | |||
| d1piwa1 | 192 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 100.0 | |
| d1cdoa1 | 199 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 100.0 | |
| d1e3ja1 | 178 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 100.0 | |
| d1llua1 | 175 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 100.0 | |
| d2fzwa1 | 197 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 100.0 | |
| d1f8fa1 | 194 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 100.0 | |
| d1e3ia1 | 202 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 100.0 | |
| d1h2ba1 | 171 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 100.0 | |
| d1pl8a1 | 185 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 100.0 | |
| d1vj0a1 | 184 | Hypothetical protein TM0436 {Thermotoga maritima [ | 99.98 | |
| d1uufa1 | 179 | Hypothetical protein YahK {Escherichia coli [TaxId | 99.98 | |
| d1kola1 | 201 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 99.98 | |
| d1rjwa1 | 171 | Alcohol dehydrogenase {Bacillus stearothermophilus | 99.97 | |
| d1p0fa1 | 198 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 99.97 | |
| d1yb5a1 | 150 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 99.97 | |
| d1jvba1 | 177 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 99.97 | |
| d2jhfa1 | 198 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 99.97 | |
| d1jqba1 | 177 | Bacterial secondary alcohol dehydrogenase {Clostri | 99.97 | |
| d1qora1 | 147 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 99.96 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 99.94 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 99.94 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 99.94 | |
| d1xa0a1 | 152 | B. subtilis YhfP homologue {Bacillus stearothermop | 99.94 | |
| d1iz0a1 | 131 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 99.94 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 99.94 | |
| d1tt7a1 | 162 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 99.94 | |
| d1o89a1 | 146 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.93 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 99.93 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 99.93 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 99.93 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 99.93 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 99.93 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 99.92 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 99.92 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 99.92 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 99.92 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 99.92 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 99.92 | |
| d1gu7a1 | 175 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 99.91 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 99.91 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 99.9 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.89 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 99.89 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 99.89 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 99.89 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 99.89 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.89 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 99.88 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.87 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 99.85 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 99.84 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 99.84 | |
| d1v3va1 | 147 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 99.64 | |
| d1vj1a1 | 166 | Putative zinc-binding alcohol dehydrogenase {Mouse | 99.64 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.46 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 98.53 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 98.34 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.16 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 98.07 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 98.07 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 98.02 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 98.0 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 97.99 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 97.96 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 97.95 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 97.93 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 97.91 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 97.86 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 97.85 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 97.85 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.84 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 97.83 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 97.83 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 97.83 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 97.82 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 97.81 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 97.81 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.81 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 97.77 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 97.75 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 97.74 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 97.74 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 97.73 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.73 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 97.73 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 97.72 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.7 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 97.67 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 97.65 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 97.64 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 97.62 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 97.62 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 97.61 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 97.6 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 97.59 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 97.57 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 97.55 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 97.53 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 97.5 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 97.5 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 97.5 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 97.41 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 97.41 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 97.4 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 97.38 | |
| d1yb2a1 | 250 | Hypothetical protein Ta0852 {Thermoplasma acidophi | 97.37 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 97.37 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 97.37 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.36 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 97.33 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 97.33 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 97.33 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 97.32 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 97.31 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 97.31 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.29 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 97.28 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.27 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 97.25 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 97.25 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 97.25 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 97.24 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 97.22 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 97.22 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 97.22 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 97.21 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 97.2 | |
| d2fk8a1 | 280 | Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri | 97.17 | |
| d1kpia_ | 291 | CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | 97.16 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 97.16 | |
| d1kpga_ | 285 | CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | 97.12 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 97.11 | |
| d1o54a_ | 266 | Hypothetical protein TM0748 {Thermotoga maritima [ | 97.06 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 97.05 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 97.05 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 97.03 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 97.0 | |
| d1nkva_ | 245 | Hypothetical Protein YjhP {Escherichia coli [TaxId | 96.99 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 96.93 | |
| d1i9ga_ | 264 | Probable methyltransferase Rv2118c {Mycobacterium | 96.91 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 96.89 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 96.85 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 96.85 | |
| d2o57a1 | 282 | Putative sarcosine dimethylglycine methyltransfera | 96.83 | |
| d2avna1 | 246 | Hypothetical methyltransferase TM1389 {Thermotoga | 96.81 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 96.79 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 96.79 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 96.78 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 96.78 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 96.77 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 96.76 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 96.69 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 96.66 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 96.65 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 96.64 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 96.63 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 96.58 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 96.54 | |
| d1zx0a1 | 229 | Guanidinoacetate methyltransferase {Human (Homo sa | 96.52 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 96.5 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 96.49 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 96.43 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 96.42 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 96.29 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 96.29 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 96.29 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 96.27 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 96.27 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 96.25 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 96.24 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 96.17 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 96.16 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 96.15 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 96.14 | |
| d2b25a1 | 324 | Hypothetical protein FLJ20628 {Human (Homo sapiens | 96.13 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 95.98 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 95.95 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 95.95 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 95.94 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 95.94 | |
| d1g8sa_ | 230 | Fibrillarin homologue {Archaeon Methanococcus jann | 95.92 | |
| d1xvaa_ | 292 | Glycine N-methyltransferase {Rat (Rattus norvegicu | 95.91 | |
| d1im8a_ | 225 | Hypothetical protein HI0319 (YecO) {Haemophilus in | 95.9 | |
| d1p91a_ | 268 | rRNA methyltransferase RlmA {Escherichia coli [Tax | 95.88 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 95.87 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 95.84 | |
| d1u2za_ | 406 | Catalytic, N-terminal domain of histone methyltran | 95.83 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 95.82 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 95.81 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 95.7 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 95.68 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 95.68 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 95.6 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 95.58 | |
| d1xtpa_ | 254 | Hypothetical protein Lmaj004091aaa (LmjF30.0810) { | 95.54 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 95.53 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 95.53 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 95.53 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 95.44 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 95.41 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 95.4 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.39 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 95.35 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.35 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 95.33 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 95.32 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 95.31 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 95.24 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 95.17 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 95.14 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 95.1 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 95.06 | |
| d1ri5a_ | 252 | mRNA cap (Guanine N-7) methyltransferase {Fungus ( | 94.98 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 94.98 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 94.98 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 94.96 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 94.95 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 94.93 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 94.91 | |
| d2ex4a1 | 222 | Adrenal gland protein AD-003 (C9orf32) {Human (Hom | 94.91 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 94.88 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 94.83 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 94.81 | |
| d1iy9a_ | 274 | Spermidine synthase {Bacillus subtilis [TaxId: 142 | 94.8 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 94.72 | |
| d2frna1 | 260 | Hypothetical protein PH0793 {Pyrococcus horikoshii | 94.69 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 94.67 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 94.58 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 94.58 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 94.54 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 94.53 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 94.5 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 94.47 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 94.47 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 94.42 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 94.42 | |
| d2p7ia1 | 225 | Hypothetical protein ECA1738 {Erwinia carotovora [ | 94.33 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 94.32 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 94.29 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 94.23 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 94.21 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 94.21 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 94.2 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 94.16 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.16 | |
| d1dssg1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.15 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 94.15 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 94.12 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 94.1 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 94.07 | |
| d1mjfa_ | 276 | Putative spermidine synthetase PF0127 (SpeE) {Arch | 94.02 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 94.02 | |
| d2o07a1 | 285 | Spermidine synthase {Human (Homo sapiens) [TaxId: | 93.95 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 93.94 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 93.86 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 93.84 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.82 | |
| d1nw3a_ | 328 | Catalytic, N-terminal domain of histone methyltran | 93.76 | |
| d2gh1a1 | 281 | Methyltransferase BC2162 {Bacillus cereus [TaxId: | 93.55 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 93.53 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 93.52 | |
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 93.46 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 93.41 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 93.38 | |
| d1inla_ | 295 | Spermidine synthase {Thermotoga maritima [TaxId: 2 | 93.38 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 93.34 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 93.31 | |
| d2b2ca1 | 312 | Spermidine synthase {Caenorhabditis elegans [TaxId | 93.28 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 93.26 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 93.24 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 93.23 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 93.16 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 93.13 | |
| d1qzza2 | 256 | Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu | 93.11 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 93.08 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 93.08 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 93.05 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 93.02 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 92.99 | |
| d1tw3a2 | 253 | Carminomycin 4-O-methyltransferase {Streptomyces p | 92.9 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 92.85 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 92.85 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 92.83 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 92.83 | |
| d1xj5a_ | 290 | Spermidine synthase {Thale cress (Arabidopsis thal | 92.81 | |
| d1trba1 | 190 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 92.67 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 92.48 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 92.48 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 92.39 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 92.37 | |
| d1uira_ | 312 | Spermidine synthase {Thermus thermophilus [TaxId: | 92.31 | |
| d1u8fo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 92.14 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 92.11 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 92.09 | |
| d1fl2a1 | 184 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 92.05 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 92.02 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 91.92 | |
| d1x7da_ | 340 | Ornithine cyclodeaminase {Pseudomonas putida [TaxI | 91.86 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 91.84 | |
| d1omoa_ | 320 | Archaeal alanine dehydrogenase {Archaeon Archaeogl | 91.76 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 91.74 | |
| d2nvwa1 | 237 | Galactose/lactose metabolism regulatory protein GA | 91.54 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 91.47 | |
| d1dxla1 | 221 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 91.46 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 91.42 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 91.32 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 91.25 | |
| d1obfo1 | 173 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 91.13 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 91.1 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 90.83 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 90.72 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 90.72 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 90.67 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 90.65 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 90.55 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 90.53 | |
| d1ojta1 | 229 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 90.52 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 90.44 | |
| d1lvla1 | 220 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 90.42 | |
| d1jqea_ | 280 | Histamine methyltransferase {Human (Homo sapiens) | 90.41 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 90.3 | |
| d1ebda1 | 223 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 90.2 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 90.16 | |
| d2dula1 | 375 | N(2),N(2)-dimethylguanosine tRNA methyltransferase | 90.16 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 90.04 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 89.94 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 89.93 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 89.93 | |
| d1v59a1 | 233 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 89.88 | |
| d2bhsa1 | 292 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 89.82 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 89.76 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 89.68 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 89.61 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 89.51 | |
| d1vdca1 | 192 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 89.45 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 89.45 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 89.45 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 89.37 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 89.2 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 89.2 | |
| d1lqta2 | 239 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 89.17 | |
| d2fcaa1 | 204 | tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil | 89.1 | |
| d1sqga2 | 284 | Ribosomal RNA small subunit methyltransferase B, R | 89.02 | |
| d3grsa1 | 221 | Glutathione reductase {Human (Homo sapiens) [TaxId | 88.84 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 88.82 | |
| d1gado1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 88.82 | |
| d2g72a1 | 263 | Phenylethanolamine N-methyltransferase, PNMTase {H | 88.63 | |
| d3lada1 | 229 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 88.62 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 88.58 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 88.57 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 88.55 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 88.55 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 88.44 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 88.43 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 88.39 | |
| d1hdgo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 88.36 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 88.22 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 88.05 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 88.04 | |
| d1h6va1 | 235 | Mammalian thioredoxin reductase {Rat (Rattus norve | 87.98 | |
| d2b4ro1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 87.93 | |
| d1rp0a1 | 278 | Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara | 87.83 | |
| d1jbqa_ | 355 | Cystathionine beta-synthase {Human (Homo sapiens) | 87.69 | |
| d1vlma_ | 208 | Possible histamine N-methyltransferase TM1293 {The | 87.58 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 87.3 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 87.25 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 87.09 | |
| d1qo8a2 | 317 | Flavocytochrome c3 (respiratory fumarate reductase | 86.61 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 86.5 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 86.31 | |
| d1p3ha_ | 99 | Chaperonin-10 (GroES) {Mycobacterium tuberculosis | 86.3 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 86.23 | |
| d1d4ca2 | 322 | Flavocytochrome c3 (respiratory fumarate reductase | 85.99 | |
| d2gmha1 | 380 | Electron transfer flavoprotein-ubiquinone oxidored | 85.89 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 85.74 | |
| d2bs2a2 | 336 | Fumarate reductase {Wolinella succinogenes [TaxId: | 85.66 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 85.44 | |
| d1wy7a1 | 201 | Hypothetical protein PH1948 {Archaeon Pyrococcus h | 85.35 | |
| d1y7la1 | 310 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 85.0 | |
| d3cmco1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 84.9 | |
| d2cula1 | 230 | GidA-related protein TTHA1897 {Thermus thermophilu | 84.88 | |
| d1ixka_ | 313 | Hypothetical methyltransferase PH1374 {Archaeon Py | 84.71 | |
| d1onfa1 | 259 | Glutathione reductase {Plasmodium falciparum [TaxI | 84.64 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 84.57 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 84.57 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 84.33 | |
| d1rm4a1 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 84.33 | |
| d1tdja1 | 331 | Threonine deaminase {Escherichia coli [TaxId: 562] | 84.06 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 83.99 | |
| d1np3a2 | 182 | Class I ketol-acid reductoisomerase (KARI) {Pseudo | 83.91 | |
| d1susa1 | 227 | Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag | 83.89 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 83.64 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 83.45 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 83.3 | |
| d1mo9a1 | 261 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 82.58 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 82.5 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 81.88 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 81.52 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 81.15 | |
| d1z7wa1 | 320 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 80.88 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 80.86 | |
| d1k3ta1 | 190 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 80.82 | |
| d1wg8a2 | 182 | TM0872, methyltransferase domain {Thermus thermoph | 80.24 |
| >d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.3e-36 Score=252.39 Aligned_cols=185 Identities=29% Similarity=0.524 Sum_probs=163.4
Q ss_pred CCCCCcccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecC
Q 018158 3 QTTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGS 82 (360)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~ 82 (360)
|.+|+| ++++++...+....+++++.+.++++|+|||||+++++||++|++++.|.++..++|+++|||++|+|+++|+
T Consensus 1 m~~P~~-~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~~~~P~i~GHE~~G~Vv~vG~ 79 (192)
T d1piwa1 1 MSYPEK-FEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGP 79 (192)
T ss_dssp CCTTTC-EEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECT
T ss_pred CCCCce-eEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCCCCCCcCcccccccchhhccc
Confidence 468998 8877777777777888989887788999999999999999999999999888888999999999999999999
Q ss_pred CC-CCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccc
Q 018158 83 NV-KNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAA 161 (360)
Q Consensus 83 ~v-~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa 161 (360)
++ +.+++||||.+.+....|+.|.+|+.|+++.|++......+....|...+|+|+||+++++++++++|+++++++|+
T Consensus 80 ~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~e~Aa 159 (192)
T d1piwa1 80 KSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLP 159 (192)
T ss_dssp TCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCCEEEEE
T ss_pred ccccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCCHHHHH
Confidence 88 56999999999888889999999999999999997766666666677889999999999999999999999998877
Q ss_pred cccchhhhhhchhhccCCCCCCCCcEEEEE
Q 018158 162 PLLCAGITVFCPMKDNNLIDSPAKKRIGIV 191 (360)
Q Consensus 162 ~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~ 191 (360)
.+.+.+.|||+++.... ++++++|||.
T Consensus 160 l~~~~~~ta~~~l~~~~---vk~g~~Vvv~ 186 (192)
T d1piwa1 160 VGEAGVHEAFERMEKGD---VRYRFTLVGY 186 (192)
T ss_dssp SSHHHHHHHHHHHHHTC---CSSEEEEECC
T ss_pred HHHHHHHHHHHHHHHhC---CCCCCEEEEE
Confidence 66666789999998654 5599999874
|
| >d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=8.9e-36 Score=249.90 Aligned_cols=184 Identities=21% Similarity=0.285 Sum_probs=160.4
Q ss_pred CCCCcccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCC
Q 018158 4 TTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSN 83 (360)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~ 83 (360)
+++++ |+.++...+++.++|+++|++.|+|+++|||||+++++||++|++.+.|......+|.++|||++|+|+++|++
T Consensus 2 ~~~~~-~~~kAav~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~~~p~i~GhE~~G~v~~vG~~ 80 (199)
T d1cdoa1 2 TVGKV-IKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPG 80 (199)
T ss_dssp CTTSC-EEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTTSCSEECCCCEEEEEEEECTT
T ss_pred CCCCc-eEEEEEEEecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhcccccccccccccccceEEEEEcCC
Confidence 46777 88888888888789999999999999999999999999999999999997777788999999999999999999
Q ss_pred CCCCCCCCEEEeccCccCCCCChhhhCCCCCCccccccc-ccccccCC-------------CccccceeeEEEeecceeE
Q 018158 84 VKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFT-YNGIFWDG-------------SITYGGYSEMLVADYRFVV 149 (360)
Q Consensus 84 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~g~~~~~-------------~~~~g~~~~~~~v~~~~~~ 149 (360)
+++|++||||++ .....|+.|.+|..|++++|.+.... ..+....+ ...+|+|+||+.+++++++
T Consensus 81 v~~~~~GdrV~~-~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~ 159 (199)
T d1cdoa1 81 VTEFQPGEKVIP-LFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVA 159 (199)
T ss_dssp CCSCCTTCEEEE-CSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEE
T ss_pred CceecCCCEEEE-eeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEE
Confidence 999999999976 45569999999999999999885433 22222111 1236999999999999999
Q ss_pred ECCCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEE
Q 018158 150 HVPENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIV 191 (360)
Q Consensus 150 ~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~ 191 (360)
++|+++++++++++.+++.|+++++...++.+ .|++|||+
T Consensus 160 ~iP~~~~~~~aa~l~~~l~t~~~av~~~~~~~--~G~tVlv~ 199 (199)
T d1cdoa1 160 KIDPSVKLDEFITHRMPLESVNDAIDLMKHGK--CIRTVLSL 199 (199)
T ss_dssp ECCTTSCCGGGEEEEEEGGGHHHHHHHHHTTC--CSEEEEEC
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHHHhCCCC--CCCEEEeC
Confidence 99999999999999999999999999887755 89999984
|
| >d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=100.00 E-value=5.4e-36 Score=247.24 Aligned_cols=171 Identities=26% Similarity=0.411 Sum_probs=148.6
Q ss_pred ccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC---CCCCCCccccccceEEEEecCCCC
Q 018158 9 TQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG---ITMYPVVPGHEITGIITKVGSNVK 85 (360)
Q Consensus 9 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~ 85 (360)
||+|+.+ + +++|+++|++.|+|+++|||||+++++||++|++++++... ..++|.++|||++|+|+++|++++
T Consensus 2 ~maAVl~---g-~~~l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~ 77 (178)
T d1e3ja1 2 NLSAVLY---K-QNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVK 77 (178)
T ss_dssp CEEEEEE---E-TTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCC
T ss_pred ceEEEEE---c-CCcEEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccC
Confidence 4676643 3 47799999999999999999999999999999998887542 345788999999999999999999
Q ss_pred CCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccc
Q 018158 86 NFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLC 165 (360)
Q Consensus 86 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~ 165 (360)
+|++||||++.+ ...|+.|..|..|.+++|.+..+.. +...+|+|+||+.+|+++++++|+++++++++++++
T Consensus 78 ~~~~GdrV~~~~-~~~~~~c~~c~~g~~~~c~~~~~~~------~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~ 150 (178)
T d1e3ja1 78 HLKKGDRVAVEP-GVPCRRCQFCKEGKYNLCPDLTFCA------TPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSF 150 (178)
T ss_dssp SCCTTCEEEECC-EECCSSSHHHHTTCGGGCTTCEETT------BTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEE
T ss_pred CCCCCCEEEECc-ccccCCccccccCCcccccccccee------ccccccccceeeeecccceeeCCCCCCHHHHHHHHh
Confidence 999999998755 5589999999999999998754322 125679999999999999999999999999999999
Q ss_pred hhhhhhchhhccCCCCCCCCcEEEEEcC
Q 018158 166 AGITVFCPMKDNNLIDSPAKKRIGIVGL 193 (360)
Q Consensus 166 ~~~ta~~~l~~~~~~~~~~~~~vlI~Ga 193 (360)
.+.|||+++++.. +++|++|+|+|+
T Consensus 151 ~~~ta~~a~~~~~---~~~g~~VlVig~ 175 (178)
T d1e3ja1 151 KLEQTVDAFEAAR---KKADNTIKVMIS 175 (178)
T ss_dssp EGGGHHHHHHHHH---HCCTTCSEEEEE
T ss_pred HHHHHHHHHHHhC---CCCCCEEEEEcc
Confidence 9999999997665 559999999875
|
| >d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=6.1e-35 Score=240.33 Aligned_cols=174 Identities=29% Similarity=0.440 Sum_probs=152.4
Q ss_pred CCCCcccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecC
Q 018158 4 TTPNHTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGS 82 (360)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~ 82 (360)
++|+| |||.++. +..++|++++++.|.|++||||||+++++||++|++.++|.++ ...+|.++|||++|+|+++|+
T Consensus 1 ~~P~t-MkA~v~~--~~g~pl~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~~~G~ 77 (175)
T d1llua1 1 TLPQT-MKAAVVH--AYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGS 77 (175)
T ss_dssp CCCSE-EEEEEBC--STTSCCEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECT
T ss_pred Ccchh-cEEEEEE--eCCCCCEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEEEeCC
Confidence 47888 6765553 3335699999999999999999999999999999999999875 457899999999999999999
Q ss_pred CCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCcccccc
Q 018158 83 NVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAP 162 (360)
Q Consensus 83 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~ 162 (360)
++++|++||||++.+....|+.|.+|..|.++.|.+... .|...+|+|+||+.+++++++++|++++++.+++
T Consensus 78 ~v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~-------~G~~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~ 150 (175)
T d1llua1 78 GVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQN-------TGYSVNGGYAEYVLADPNYVGILPKNVKATIHPG 150 (175)
T ss_dssp TCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEE-------BTTTBCCSSBSEEEECTTTSEECCTTCCCCEEEE
T ss_pred CccccccCCEEEeccccccCCccccccCCcccccccccc-------cccccccccceEEEechHHEEECCCCCChhHHHH
Confidence 999999999999888888999999999999999987543 2346789999999999999999999999999998
Q ss_pred ccchhhhhhchhhccCCCCCCCCcEEEEE
Q 018158 163 LLCAGITVFCPMKDNNLIDSPAKKRIGIV 191 (360)
Q Consensus 163 l~~~~~ta~~~l~~~~~~~~~~~~~vlI~ 191 (360)
+.+.+.|+++.++.-. .+|++|||+
T Consensus 151 ~~~~~~t~~~~~~~g~----~~G~~VLVl 175 (175)
T d1llua1 151 KLDDINQILDQMRAGQ----IEGRIVLEM 175 (175)
T ss_dssp CGGGHHHHHHHHHTTC----CSSEEEEEC
T ss_pred HHhHHHHHHHHHHhCC----CCCCEEEeC
Confidence 9999999998886432 279999984
|
| >d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=100.00 E-value=4.8e-34 Score=238.40 Aligned_cols=181 Identities=21% Similarity=0.262 Sum_probs=156.0
Q ss_pred cccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCC
Q 018158 8 HTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNF 87 (360)
Q Consensus 8 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 87 (360)
.|||.++..++++.++|+++++|.|+|+++||||||++++||++|+++++|.+....+|.++|||++|+|+++|++|+++
T Consensus 3 ~~~~~kAav~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~~~p~v~GhE~~G~V~~vG~~V~~~ 82 (197)
T d2fzwa1 3 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKL 82 (197)
T ss_dssp CCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCSC
T ss_pred CceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcccccccccCCcceeeEEEeecCCceec
Confidence 46788888888888899999999999999999999999999999999999988778899999999999999999999999
Q ss_pred CCCCEEEeccCccCCCCChhhhCCCCCCccccccc-cc-------------ccccCCCccccceeeEEEeecceeEECCC
Q 018158 88 KVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFT-YN-------------GIFWDGSITYGGYSEMLVADYRFVVHVPE 153 (360)
Q Consensus 88 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~-------------g~~~~~~~~~g~~~~~~~v~~~~~~~iP~ 153 (360)
++||||++.+. ..|+.|.+|..|.++.|.+.... .. |.-..++..+|+|+||+.+++++++++|+
T Consensus 83 ~~GdrV~v~~~-~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp~ 161 (197)
T d2fzwa1 83 KAGDTVIPLYI-PQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDP 161 (197)
T ss_dssp CTTCEEEECSS-CCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCT
T ss_pred CCCCEEEEccc-cccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHEEECCC
Confidence 99999977554 68999999999999999874222 11 11112333469999999999999999999
Q ss_pred CCCccccccccchhhhhhchhhccCCCCCCCCcEEEEE
Q 018158 154 NIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIV 191 (360)
Q Consensus 154 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~ 191 (360)
++++++++++++++.|+++++..+...+ .+++|||+
T Consensus 162 ~l~~~~aa~~~~~~~t~~~a~~~~~~g~--~~~tvvvi 197 (197)
T d2fzwa1 162 LIKVDEFVTHNLSFDEINKAFELMHSGK--SIRTVVKI 197 (197)
T ss_dssp TSCSGGGEEEEEEGGGHHHHHHHHHHTC--CSEEEEEC
T ss_pred CCCHHHHhhhhhHHHHHHHHHHhccCCC--cCCEEEeC
Confidence 9999999999999999999987665444 78888874
|
| >d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=100.00 E-value=1.2e-33 Score=235.21 Aligned_cols=170 Identities=21% Similarity=0.405 Sum_probs=140.9
Q ss_pred EEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEE
Q 018158 14 GWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRA 93 (360)
Q Consensus 14 ~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 93 (360)
........++|++++++.|+|+++|||||+.+++||++|++++.|.+ ..++|.++|||++|+|+++|++|++|++||||
T Consensus 6 Aav~~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~-~~~~P~i~GHE~~G~V~~vG~~v~~~~vGDrV 84 (194)
T d1f8fa1 6 AAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKY-PVPLPAVLGHEGSGIIEAIGPNVTELQVGDHV 84 (194)
T ss_dssp EEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSS-CCCSSBCCCCEEEEEEEEECTTCCSCCTTCEE
T ss_pred EEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhcc-cccCCcccccceEEEeeecCccceeEccCcee
Confidence 34445666789999999999999999999999999999999999987 45789999999999999999999999999999
Q ss_pred EeccCccCCCCChhhhCCCCCCcccc-cccccccccCC---------------CccccceeeEEEeecceeEECCCCCCc
Q 018158 94 AVGCLAAACMECEFCKDSQENYCDKI-QFTYNGIFWDG---------------SITYGGYSEMLVADYRFVVHVPENIAM 157 (360)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~c~~~-~~~~~g~~~~~---------------~~~~g~~~~~~~v~~~~~~~iP~~~~~ 157 (360)
+. +.. .|+.|.+|.+|++++|++. .+.+.|....+ ....|+|+||..+++.+++++|+++++
T Consensus 85 v~-~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip~~i~~ 162 (194)
T d1f8fa1 85 VL-SYG-YCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPF 162 (194)
T ss_dssp EE-CCC-CCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTTCCG
T ss_pred ee-ecc-cccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEECCCCCCc
Confidence 55 444 7999999999999999974 22233332211 123589999999999999999988765
Q ss_pred cccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEE
Q 018158 158 DAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTV 213 (360)
Q Consensus 158 ~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~ 213 (360)
++ .+++.|+|++|++++|+++.+|++ |++
T Consensus 163 ~~---------------------------~~~i~g~g~~g~~aiq~a~~~g~~~iia 192 (194)
T d1f8fa1 163 DQ---------------------------LVKFYAFDEINQAAIDSRKGITLKPIIK 192 (194)
T ss_dssp GG---------------------------GEEEEEGGGHHHHHHHHHHTSCSEEEEE
T ss_pred cc---------------------------EEEEeCcHHHHHHHHHHHHHcCCCEEEE
Confidence 43 345667799999999999999996 444
|
| >d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=100.00 E-value=2.6e-33 Score=235.72 Aligned_cols=176 Identities=21% Similarity=0.296 Sum_probs=147.9
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
|++++....++.++|+++++|.|+|+++||||||++++||++|+++++|.+ +..+|.++|||++|+|+++|++|++|++
T Consensus 7 ~~~KAaV~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~-~~~~P~v~GHE~~G~V~~vG~~V~~~~~ 85 (202)
T d1e3ia1 7 IKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKK-KALFPVVLGHECAGIVESVGPGVTNFKP 85 (202)
T ss_dssp EEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTS-CCCSSBCCCCEEEEEEEEECTTCCSCCT
T ss_pred EEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeec-ccccccccccccceEEeeecCCceeccC
Confidence 566667777776789999999999999999999999999999999999987 5677999999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccc------------------cccccCCCccccceeeEEEeecceeEEC
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTY------------------NGIFWDGSITYGGYSEMLVADYRFVVHV 151 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~------------------~g~~~~~~~~~g~~~~~~~v~~~~~~~i 151 (360)
||||++. ....|+.|.+|..|.++.|.+..... .|....+....|+|+||+.+++.+++++
T Consensus 86 GdrV~~~-~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~l~~l 164 (202)
T d1e3ia1 86 GDKVIPF-FAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARV 164 (202)
T ss_dssp TCEEEEC-SSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEEC
T ss_pred CCEEEEE-eeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehhhEEEC
Confidence 9999764 55689999999999999998743221 1111112233599999999999999999
Q ss_pred CCCCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEc
Q 018158 152 PENIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVG 192 (360)
Q Consensus 152 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~G 192 (360)
|++++++.++++.+++.++++++..+. +|++|.|+.
T Consensus 165 P~~~~~~~~~~~~~~~~~~~~a~~~~k-----~G~~V~vi~ 200 (202)
T d1e3ia1 165 DDEFDLDLLVTHALPFESINDAIDLMK-----EGKSIRTIL 200 (202)
T ss_dssp CTTSCGGGGEEEEEEGGGHHHHHHHHH-----TTCCSEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCC-----CCCEEEEEE
Confidence 999999999999999888888886532 888887753
|
| >d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=100.00 E-value=2.7e-33 Score=228.96 Aligned_cols=161 Identities=23% Similarity=0.409 Sum_probs=141.5
Q ss_pred cCCCCCceEEEEeCCCC-CCCeEEEEEeeeecccchhhhhccCCC---CCCCCCccccccceEEEEecCCCCCCCCCCEE
Q 018158 18 HDPSGKITPYIFKRREN-GVNDVTIKILYCGICHTDIHHVKNDWG---ITMYPVVPGHEITGIITKVGSNVKNFKVGDRA 93 (360)
Q Consensus 18 ~~~~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 93 (360)
++..++|++++++.|++ ++||||||+++++||++|+++++|.+. ...+|.++|||++|+|+++|+++++|++||||
T Consensus 6 ~~~g~pl~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~~GdrV 85 (171)
T d1h2ba1 6 HEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPV 85 (171)
T ss_dssp SSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCCTTCEE
T ss_pred EeCCCCCEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCCCCCEE
Confidence 34335699999999985 799999999999999999999998764 34678999999999999999999999999999
Q ss_pred EeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhch
Q 018158 94 AVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCP 173 (360)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~ 173 (360)
++.+. ..|+.|.+|..|.+++|.+..+. |...+|+|+||+.+++++++++|++++++.++++.+.+.|||++
T Consensus 86 ~~~~~-~~cg~~~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta~~a 157 (171)
T d1h2ba1 86 ILHPA-VTDGTCLACRAGEDMHCENLEFP-------GLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLER 157 (171)
T ss_dssp EECSC-BCCSCSHHHHTTCGGGCTTCBCB-------TTTBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHHHHH
T ss_pred EEcCc-cCCCCcccccccccccccccccc-------eeecccccceeeeehhhcceecCCCCCHHHHHHHHhHHHHHHHH
Confidence 87555 58999999999999999875442 33578999999999999999999999999899999999999999
Q ss_pred hhccCCCCCCCCcEEEE
Q 018158 174 MKDNNLIDSPAKKRIGI 190 (360)
Q Consensus 174 l~~~~~~~~~~~~~vlI 190 (360)
++... + .|++|||
T Consensus 158 l~~~~---~-~G~~VlI 170 (171)
T d1h2ba1 158 LEKGE---V-LGRAVLI 170 (171)
T ss_dssp HHTTC---C-SSEEEEE
T ss_pred HHhcC---C-CCCEEEe
Confidence 98654 4 7999987
|
| >d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-33 Score=229.86 Aligned_cols=170 Identities=25% Similarity=0.322 Sum_probs=140.3
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC---CCCCCCccccccceEEEEecCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG---ITMYPVVPGHEITGIITKVGSNVKN 86 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~ 86 (360)
+.|+++ + ++++|++++++.|+|+++||||||++++||++|++++++... ..++|.++|||++|+|+++|+++++
T Consensus 8 ~~a~V~--~-gp~~l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~ 84 (185)
T d1pl8a1 8 NLSLVV--H-GPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKH 84 (185)
T ss_dssp CEEEEE--E-ETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCS
T ss_pred CEEEEE--e-CCCeEEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceee
Confidence 444444 3 447899999999999999999999999999999999876432 3567889999999999999999999
Q ss_pred CCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccch
Q 018158 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCA 166 (360)
Q Consensus 87 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~ 166 (360)
|++||||++.+ ...|+.|.+|..|+++.|.+..+... ...+|+|+||+.++.++++++|++++++++++++
T Consensus 85 ~~~GdrV~~~~-~~~cg~c~~c~~G~~~~c~~~~~~g~------~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~p-- 155 (185)
T d1pl8a1 85 LKPGDRVAIEP-GAPRENDEFCKMGRYNLSPSIFFCAT------PPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFP-- 155 (185)
T ss_dssp CCTTCEEEECS-EECSSCCHHHHTTCGGGCTTCEETTB------TTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEEE--
T ss_pred ecccccceecc-eeccccchhhccchhchhccceeeec------ccccccceEEEEEchHHEEECCCCCCHHHHHHHH--
Confidence 99999998755 45799999999999999987543211 2467999999999999999999999999988665
Q ss_pred hhhhhchhhccCCCCCCCCcEEEEEcCCh
Q 018158 167 GITVFCPMKDNNLIDSPAKKRIGIVGLGG 195 (360)
Q Consensus 167 ~~ta~~~l~~~~~~~~~~~~~vlI~Gag~ 195 (360)
+.+|+++++... +++|++||| |+|+
T Consensus 156 l~~a~~a~~~~~---~~~G~~VlI-g~GP 180 (185)
T d1pl8a1 156 LEKALEAFETFK---KGLGLKIML-KCDP 180 (185)
T ss_dssp GGGHHHHHHHHH---TTCCSEEEE-ECCT
T ss_pred HHHHHHHHHHhC---CCCCCEEEE-EeCC
Confidence 345667776655 559999988 6554
|
| >d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=99.98 E-value=2.1e-32 Score=225.05 Aligned_cols=172 Identities=20% Similarity=0.267 Sum_probs=139.8
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCC----
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVK---- 85 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~---- 85 (360)
|+++++.+.+..++|++++++.|+|+++||||||.+++||++|+++++|.++..++|+++|||++|+|+++|++|+
T Consensus 3 ~k~kA~v~~~~~~pl~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~~~P~vlGHE~~G~V~~vG~~v~~~~~ 82 (184)
T d1vj0a1 3 LKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLNG 82 (184)
T ss_dssp EEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEESSCCBCTTS
T ss_pred ceEEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCccccccccceeeeeeeeEEecccccccc
Confidence 5666666677667799999999999999999999999999999999999887778999999999999999999986
Q ss_pred -CCCCCCEEEeccCccCCCCChhhhCCCC-CCccccc-ccccccccCCCccccceeeEEEee-cceeEECCCCCCccccc
Q 018158 86 -NFKVGDRAAVGCLAAACMECEFCKDSQE-NYCDKIQ-FTYNGIFWDGSITYGGYSEMLVAD-YRFVVHVPENIAMDAAA 161 (360)
Q Consensus 86 -~~~~Gd~V~~~~~~~~~~~~~~~~~~~~-~~c~~~~-~~~~g~~~~~~~~~g~~~~~~~v~-~~~~~~iP~~~~~~~aa 161 (360)
.+++||+|++.+ ..+|+.|.+|+.|.+ +.|.+.. +++.+..-.....+|+|+||+.++ +++++++|+++++++.
T Consensus 83 ~~~~~Gd~V~~~~-~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~ip~~l~~~~p- 160 (184)
T d1vj0a1 83 ELLKPGDLIVWNR-GITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITHRLP- 160 (184)
T ss_dssp CBCCTTCEEEECS-EECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTCCEEEE-
T ss_pred ccccceeeeEecc-ccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEECCCCCCHHHH-
Confidence 468999997654 558999999999995 5688743 223222222234689999999996 5789999999997642
Q ss_pred cccchhhhhhchhhccCCCCCCCCcEEEEE
Q 018158 162 PLLCAGITVFCPMKDNNLIDSPAKKRIGIV 191 (360)
Q Consensus 162 ~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~ 191 (360)
+.+|+++++... +++|++|+|+
T Consensus 161 -----l~~A~~a~~~~~---~~~G~~VlI~ 182 (184)
T d1vj0a1 161 -----LKEANKALELME---SREALKVILY 182 (184)
T ss_dssp -----GGGHHHHHHHHH---HTSCSCEEEE
T ss_pred -----HHHHHHHHHHhC---CCcCCEEEEe
Confidence 345678887655 5599999997
|
| >d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=99.98 E-value=1.8e-32 Score=225.01 Aligned_cols=161 Identities=37% Similarity=0.696 Sum_probs=134.9
Q ss_pred EeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEEE
Q 018158 15 WAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRAA 94 (360)
Q Consensus 15 ~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~ 94 (360)
...++++++|+++|++.|+|++||||||+.+++||++|+++++|.++...+|.++|||++|+|+++|++|++|++||+|.
T Consensus 4 ~~~~~~~~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~~~~P~i~GhE~~G~V~~vG~~V~~~~vGdrV~ 83 (179)
T d1uufa1 4 VGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVG 83 (179)
T ss_dssp EEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCCTTCEEE
T ss_pred EEEccCCCCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeeccccccccccccccccchhhccccccCCCCCEEE
Confidence 33467778999999999999999999999999999999999999887778899999999999999999999999999999
Q ss_pred eccCccCCCCChhhhCCCCCCccccccccccccc-CCCccccceeeEEEeecceeEECCCCCCccccccccchhhhhhch
Q 018158 95 VGCLAAACMECEFCKDSQENYCDKIQFTYNGIFW-DGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGITVFCP 173 (360)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~-~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~ 173 (360)
+.+..+.|+.|.+|+.|++++|.+..+.+.+... .+...+|+|+||+.+++++++++|+....... ...+.++|++
T Consensus 84 v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~~~~~---a~~l~~a~~a 160 (179)
T d1uufa1 84 VGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIEMIR---ADQINEAYER 160 (179)
T ss_dssp ECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCEEEEC---GGGHHHHHHH
T ss_pred EcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCcChhH---hchhHHHHHH
Confidence 9888899999999999999999987655444332 23355799999999999999999966543322 2344566777
Q ss_pred hhccC
Q 018158 174 MKDNN 178 (360)
Q Consensus 174 l~~~~ 178 (360)
+.+..
T Consensus 161 ~~~a~ 165 (179)
T d1uufa1 161 MLRGD 165 (179)
T ss_dssp HHTTC
T ss_pred HHHhC
Confidence 76543
|
| >d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=99.98 E-value=9.2e-35 Score=243.01 Aligned_cols=180 Identities=22% Similarity=0.321 Sum_probs=149.2
Q ss_pred CCCceEEEEeCCCC-------CCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEE
Q 018158 21 SGKITPYIFKRREN-------GVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRA 93 (360)
Q Consensus 21 ~~~l~~~~~~~p~~-------~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 93 (360)
+++++++|++.|++ +++||+||+.+++||++|+++++|.+ +..+|.++|||++|+|+++|++|++|++||||
T Consensus 10 ~~~le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~-~~~~P~v~GHE~~G~Vv~vG~~V~~~~vGdrV 88 (201)
T d1kola1 10 SGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRT-TAQVGLVLGHEITGEVIEKGRDVENLQIGDLV 88 (201)
T ss_dssp TTEEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCS-CCCTTCBCCCCEEEEEEEECTTCCSCCTTCEE
T ss_pred CCceEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCc-ccccceeccceeeeeeecccccccccccccee
Confidence 46799999999865 46999999999999999999999987 46789999999999999999999999999999
Q ss_pred EeccCccCCCCChhhhCCCCCCccccccc-cccccc--CCCccccceeeEEEeec--ceeEECCCCCCccccccccchhh
Q 018158 94 AVGCLAAACMECEFCKDSQENYCDKIQFT-YNGIFW--DGSITYGGYSEMLVADY--RFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~g~~~--~~~~~~g~~~~~~~v~~--~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
++ ....+|+.|.+|++|+++.|...... ..|... .....+|+|+||+.+|. .++++||++.+..+++++.....
T Consensus 89 ~v-~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd~~~~~~~~~~~~~~~ 167 (201)
T d1kola1 89 SV-PFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVG 167 (201)
T ss_dssp EC-CSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHHHHTCCHHHHHT
T ss_pred EE-eeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEECCCCCChHHHHHHHHHHH
Confidence 76 44779999999999999999774332 222221 12356799999999985 47999999877777888888888
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH 209 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~ 209 (360)
++++++.... ...++ +|+|++|++++|+||.+|+
T Consensus 168 ~~~~a~~~~~---~~~g~----~g~G~vG~~~i~~ak~~GA 201 (201)
T d1kola1 168 VQVISLDDAP---RGYGE----FDAGVPKKFVIDPHKTFSA 201 (201)
T ss_dssp EEEECGGGHH---HHHHH----HHHTCSCEEEECTTCSSCC
T ss_pred HHHHHHHhCC---CCCeE----EeeCHHHHHHHHHHHHcCC
Confidence 8898887654 22443 5889999999999999886
|
| >d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.97 E-value=1.5e-31 Score=219.13 Aligned_cols=169 Identities=28% Similarity=0.515 Sum_probs=140.6
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCC-CCCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDW-GITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|||.++ .+..++|++++++.|+|++|||||||++++||++|++.+++.+ ....+|.++|||++|+|+++|+++++++
T Consensus 1 MkA~v~--~~~g~pl~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~vG~~v~~~~ 78 (171)
T d1rjwa1 1 MKAAVV--EQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLK 78 (171)
T ss_dssp CEEEEB--SSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred CeEEEE--ecCCCCcEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEecccccCce
Confidence 555444 3444569999999999999999999999999999999888654 3567899999999999999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||||++.+....|+.|..|..+.++.|.+..+ .|...+|+|+||+.+++++++++|++++++.|+ +.+ ..
T Consensus 79 vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~A~-l~~-~~ 149 (171)
T d1rjwa1 79 VGDRVGIPWLYSACGHCDYCLSGQETLCEHQKN-------AGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQP-LEK-IN 149 (171)
T ss_dssp TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEE-------BTTTBCCSSBSEEEEEGGGCEECCTTCCEEEEE-GGG-HH
T ss_pred eeeEEeeccccccccccccccCCCccccccccc-------cceeccCccccceEecHHHEEECCCCCCHHHHH-HHH-HH
Confidence 999999888888999999999999999988543 233567999999999999999999999987554 443 34
Q ss_pred hhhchhhccCCCCCCCCcEEEEEcC
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVGL 193 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~Ga 193 (360)
++++.+.+.. + +|++|||+|.
T Consensus 150 ~~~~~~~~~~---~-~G~tVlViG~ 170 (171)
T d1rjwa1 150 EVFDRMLKGQ---I-NGRVVLTLED 170 (171)
T ss_dssp HHHHHHHTTC---C-SSEEEEECCC
T ss_pred HHHHHHHhcC---C-CCCEEEEeCC
Confidence 5666665432 2 5999999984
|
| >d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=99.97 E-value=3.2e-32 Score=227.47 Aligned_cols=172 Identities=22% Similarity=0.336 Sum_probs=138.3
Q ss_pred EEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCCEE
Q 018158 14 GWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGDRA 93 (360)
Q Consensus 14 ~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 93 (360)
+..++++.++|+++|++.|+|+++||||||.+++||++|+++++|.+ +..+|.++|||++|+|+++|++++++++||||
T Consensus 11 Aav~~~~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~-~~~~P~i~GHE~~G~Vv~~G~~v~~~~~GdrV 89 (198)
T d1p0fa1 11 AAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEII-PSKFPVILGHEAVGVVESIGAGVTCVKPGDKV 89 (198)
T ss_dssp EEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSS-CCCSSBCCCCCEEEEEEEECTTCCSCCTTCEE
T ss_pred EEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeeeecc-ccccccccceeeeeeeeecCcccccCcCCCEE
Confidence 44456776789999999999999999999999999999999999987 46789999999999999999999999999999
Q ss_pred EeccCccCCCCChhhhCCCCCCccccccc-ccccc-------------cCCCccccceeeEEEeecceeEECCCCCCccc
Q 018158 94 AVGCLAAACMECEFCKDSQENYCDKIQFT-YNGIF-------------WDGSITYGGYSEMLVADYRFVVHVPENIAMDA 159 (360)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~g~~-------------~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~ 159 (360)
++. +...|+.|.+|..+.+++|.+..+. ..|.. ......+|+|+||+.+++..++++|++++.+.
T Consensus 90 ~~~-~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip~~~~~~~ 168 (198)
T d1p0fa1 90 IPL-FVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNF 168 (198)
T ss_dssp EEC-SSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECTTSCGGG
T ss_pred EEE-eeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEECCCCCCHHH
Confidence 774 4568999999999999999874332 11111 11122358999999999999999999998776
Q ss_pred cccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHH
Q 018158 160 AAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHV 199 (360)
Q Consensus 160 aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~ 199 (360)
++...+...+ +.++++++|.|+|++|++
T Consensus 169 ~~~~~~~~~~------------v~~~~~vlv~G~G~iGl~ 196 (198)
T d1p0fa1 169 LVSTKLTLDQ------------INKAFELLSSGQGVRSIM 196 (198)
T ss_dssp GEEEEECGGG------------HHHHHHHTTTSSCSEEEE
T ss_pred HHHhhcchhh------------cCCCCEEEEECCCcceEE
Confidence 5544433211 225667888888887753
|
| >d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=5.5e-31 Score=210.28 Aligned_cols=147 Identities=20% Similarity=0.236 Sum_probs=133.4
Q ss_pred ccceeEEeccCCCCCceEE-EEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC-CCCCCccccccceEEEEecCCCCC
Q 018158 9 TQSVVGWAAHDPSGKITPY-IFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIITKVGSNVKN 86 (360)
Q Consensus 9 ~~~~~~~~~~~~~~~l~~~-~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~ 86 (360)
||||+++.-+++++.++++ +++.|+|++|||||||++++||++|++.++|.++. ..+|.++|||++|+|+++|+++++
T Consensus 2 ~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~~ 81 (150)
T d1yb5a1 2 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA 81 (150)
T ss_dssp EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTT
T ss_pred ceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEeecceeec
Confidence 7899999888888899986 69999999999999999999999999999987753 467889999999999999999999
Q ss_pred CCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccch
Q 018158 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCA 166 (360)
Q Consensus 87 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~ 166 (360)
|++||||++.. ...|+|+||+.+++++++++|+++++++|++++++
T Consensus 82 ~~vGdrV~~~~----------------------------------~~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~ 127 (150)
T d1yb5a1 82 FKKGDRVFTSS----------------------------------TISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLE 127 (150)
T ss_dssp CCTTCEEEESC----------------------------------CSSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGG
T ss_pred cccCccccccc----------------------------------cccccccccccccccccccccCCCCHHHHHHhhhh
Confidence 99999998643 34699999999999999999999999999999999
Q ss_pred hhhhhchhhccCCCCCCCCcEEEEE
Q 018158 167 GITVFCPMKDNNLIDSPAKKRIGIV 191 (360)
Q Consensus 167 ~~ta~~~l~~~~~~~~~~~~~vlI~ 191 (360)
..|+|+.+...+... .|+++||+
T Consensus 128 ~~ta~~~~~~~g~~~--~G~~vliL 150 (150)
T d1yb5a1 128 KVAEAHENIIHGSGA--TGKMILLL 150 (150)
T ss_dssp GHHHHHHHHHHSSCC--SSEEEEEC
T ss_pred hhhehhhheEEcCcc--cCCEEEEC
Confidence 999999988877766 99999874
|
| >d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.97 E-value=8.8e-31 Score=215.65 Aligned_cols=167 Identities=22% Similarity=0.326 Sum_probs=136.0
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC--------CCCCCCccccccceEEEEec
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG--------ITMYPVVPGHEITGIITKVG 81 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~--------~~~~p~~~G~e~~G~V~~vG 81 (360)
|||.++..++ ++|++++++.|+|++||||||+.+++||++|+++++|.++ ..++|+++|||++|+|+++|
T Consensus 1 MKA~~~~~~G--~pl~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g 78 (177)
T d1jvba1 1 MRAVRLVEIG--KPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVG 78 (177)
T ss_dssp CEEEEECSTT--SCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEEC
T ss_pred CeEEEEEeCC--CCCEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeec
Confidence 6777775554 4599999999999999999999999999999999998653 34689999999999999999
Q ss_pred CCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecce-eEECCCCCCcccc
Q 018158 82 SNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRF-VVHVPENIAMDAA 160 (360)
Q Consensus 82 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~-~~~iP~~~~~~~a 160 (360)
+.+++|++||||++.+ ...|+.|.+|+.++++.|.+..+. |...+|+|+||+.+++.+ ++++|+..+.+.+
T Consensus 79 ~~v~~~~~GdrV~~~~-~~~c~~c~~~~~g~~~~c~~~~~~-------g~~~~G~~aey~~vp~~~~~~~~~~~~~~~~a 150 (177)
T d1jvba1 79 DEVVGYSKGDLVAVNP-WQGEGNCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHYKYMYKLRRVKPMITK 150 (177)
T ss_dssp TTCCSCCTTCEEEECC-EECCSSSHHHHTTCGGGCSSCEEB-------TTTBCCSSBSEEEESCGGGEEECSSSCCCCEE
T ss_pred cCccccccCceEeeee-ccccccccccccccccccCCccee-------eeccccccccEEEEEhHHeEEECCCCChHHHH
Confidence 9999999999998754 567999999999999999986432 335679999999998765 5566554444444
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEE
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGI 190 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI 190 (360)
+.+..+..++++++.... + .|++|||
T Consensus 151 ~~~~~~~~~a~~~~~~~~---~-~G~~VlI 176 (177)
T d1jvba1 151 TMKLEEANEAIDNLENFK---A-IGRQVLI 176 (177)
T ss_dssp EEEGGGHHHHHHHHHTTC---C-CSEEEEE
T ss_pred HHHHHHHHHHHHHHHhhc---c-cCCceEC
Confidence 444567888899988766 2 5888887
|
| >d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=99.97 E-value=2.1e-30 Score=217.01 Aligned_cols=175 Identities=21% Similarity=0.354 Sum_probs=141.1
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
+|+++..+.+++++|++++++.|+|+++||||||.+++||++|++.++|.+ +..+|.++|||++|+|+++|++++++++
T Consensus 7 ~k~KAavl~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~-~~~~P~i~GHE~~G~Vv~vG~~v~~~~v 85 (198)
T d2jhfa1 7 IKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRP 85 (198)
T ss_dssp EEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSS-CCCSSBCCCCSEEEEEEEECTTCCSCCT
T ss_pred eEEEEEEEecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCc-ccccceecccceeEEEEecCccccCcCC
Confidence 677777778888899999999999999999999999999999999999987 4678999999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccc-cccc-------------cCCCccccceeeEEEeecceeEECCCCC
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTY-NGIF-------------WDGSITYGGYSEMLVADYRFVVHVPENI 155 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~-~g~~-------------~~~~~~~g~~~~~~~v~~~~~~~iP~~~ 155 (360)
||||++.+ ...|+.|.+|..+..+.|.+..... .|.. .+.....|+|+||+++++.+++++|+++
T Consensus 86 GdrV~v~~-~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~p~~~ 164 (198)
T d2jhfa1 86 GDKVIPLF-TPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAF 164 (198)
T ss_dssp TCEEEECS-SCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCTTS
T ss_pred CCEEEEee-eecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHeEECCCCC
Confidence 99997654 5689999999999999999854332 1111 1112345899999999999999999999
Q ss_pred CccccccccchhhhhhchhhccCCCCCCCCcEEEEE
Q 018158 156 AMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIV 191 (360)
Q Consensus 156 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~ 191 (360)
+++.++...+++.+...... .++ +|++|+|+
T Consensus 165 ~~e~l~~~~~~~~~v~~g~~---~l~--~G~~VaVi 195 (198)
T d2jhfa1 165 ALDPLITHVLPFEKINEGFD---LLR--SGESIRTI 195 (198)
T ss_dssp CCGGGEEEEEEGGGHHHHHH---HHH--TTCCSEEE
T ss_pred CHHHHHHHHHHHHhhhhCCc---eee--CCCEEEEE
Confidence 88766655444433332222 223 88888775
|
| >d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=99.97 E-value=5.1e-31 Score=215.65 Aligned_cols=171 Identities=16% Similarity=0.177 Sum_probs=137.1
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKV 89 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 89 (360)
||+.++. ++++++++|+|.|.|+++|||||+++++||++|++.+++......+|.++|||++|+|+++|+++++|++
T Consensus 1 MKa~v~~---~~~~l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~~~~P~i~GhE~~G~V~~vG~~v~~~~v 77 (177)
T d1jqba1 1 MKGFAML---GINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKP 77 (177)
T ss_dssp CEEEEEE---ETTEEEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTCCCSSEECCCCEEEEEEEECTTCCSCCT
T ss_pred CeEEEEE---eCCCeEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCCCCCCccCcceeeEEeeecccccceecC
Confidence 5555442 3467999999999999999999999999999999888766656788999999999999999999999999
Q ss_pred CCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeec--ceeEECCCCCCccccccccchh
Q 018158 90 GDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADY--RFVVHVPENIAMDAAAPLLCAG 167 (360)
Q Consensus 90 Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~--~~~~~iP~~~~~~~aa~l~~~~ 167 (360)
||||++. ...+|+.|.+|..+.++.|....+.+ ..+...+|+|+||+++|. .+++++|+++++++++...
T Consensus 78 GdrV~v~-~~~~cg~c~~C~~g~~~~c~~~~~~~----~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~--- 149 (177)
T d1jqba1 78 GDRVIVP-CTTPDWRSLEVQAGFQQHSNGMLAGW----KFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHV--- 149 (177)
T ss_dssp TCEEEEC-SCCCCSSSHHHHTTCGGGTTSTTTTC----CBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEEE---
T ss_pred CCcEEEe-eeeccccccchhhhhhcccccccccc----cccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHHH---
Confidence 9999874 55599999999999999999864332 123357899999999986 4699999999988765433
Q ss_pred hhhhchhhccCCCCCCCCcEEEEEcCChHHHHHH
Q 018158 168 ITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAV 201 (360)
Q Consensus 168 ~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~ai 201 (360)
++++.. .++.++|.|+|++|++++
T Consensus 150 ---~~~~~~-------~~~~vlv~g~gp~gl~aa 173 (177)
T d1jqba1 150 ---YHGFDH-------IEEALLLMKDKPKDLIKA 173 (177)
T ss_dssp ---EESGGG-------HHHHHHHHHHCCTTCSEE
T ss_pred ---HHHHHH-------hcCceEEECCCHHHhhee
Confidence 333332 235577788888776543
|
| >d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=6e-29 Score=197.96 Aligned_cols=142 Identities=20% Similarity=0.240 Sum_probs=123.2
Q ss_pred eeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecCCCCCCCCCC
Q 018158 12 VVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGSNVKNFKVGD 91 (360)
Q Consensus 12 ~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 91 (360)
.+++..+++++.|++++.+.|+|++|||+|||++++||++|+++++|.++...+|.++|||++|+|+++|+++++|++||
T Consensus 3 ~i~~~~~G~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd 82 (147)
T d1qora1 3 RIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAGD 82 (147)
T ss_dssp EEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCTTC
T ss_pred EEEEcccCCCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCCCcceeeeccccccceeeeeeecccccccc
Confidence 35666678888999999999999999999999999999999999999988788999999999999999999999999999
Q ss_pred EEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCcccc--ccccchhhh
Q 018158 92 RAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAA--APLLCAGIT 169 (360)
Q Consensus 92 ~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a--a~l~~~~~t 169 (360)
||+... ...|+|+||..++.+.++++|++++++++ +++++...+
T Consensus 83 rV~~~~----------------------------------~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~ 128 (147)
T d1qora1 83 RVVYAQ----------------------------------SALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQ 128 (147)
T ss_dssp EEEESC----------------------------------CSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHH
T ss_pred eeeeec----------------------------------cccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHH
Confidence 997421 34599999999999999999999988755 456677777
Q ss_pred hhchhhccCCCCCCCCcEEEE
Q 018158 170 VFCPMKDNNLIDSPAKKRIGI 190 (360)
Q Consensus 170 a~~~l~~~~~~~~~~~~~vlI 190 (360)
+++++.... +++|++|||
T Consensus 129 ~~~~l~~~~---~~~G~~VLI 146 (147)
T d1qora1 129 RAHEILESR---ATQGSSLLI 146 (147)
T ss_dssp HHHHHHHTT---CCCBCCEEE
T ss_pred HHHHHHHhC---CCCCCEEEe
Confidence 777776543 459999997
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=2.3e-27 Score=193.36 Aligned_cols=164 Identities=30% Similarity=0.477 Sum_probs=145.9
Q ss_pred CccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEee
Q 018158 156 AMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFIL 235 (360)
Q Consensus 156 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~ 235 (360)
+.+.||+++|++.|+|+++++.. +++|++|+|+|+|++|++++|+||.+|++|++++++++|++.+++ +|++++++
T Consensus 2 p~e~AApl~cag~Ta~~al~~~~---~~~g~~vlI~GaG~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~-lGa~~~i~ 77 (168)
T d1piwa2 2 PSHLAAPLLCGGLTVYSPLVRNG---CGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK-MGADHYIA 77 (168)
T ss_dssp CHHHHGGGGTHHHHHHHHHHHTT---CSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTCSEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHhC---cCCCCEEEEECCCCcchhHHHHhhhccccccccccchhHHHHhhc-cCCcEEee
Confidence 34668899999999999998765 569999999999999999999999999999999999999999999 99999998
Q ss_pred CccH-HHHHhcCCCcCEEEEcCCCcc--cHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHHH
Q 018158 236 STNA-MQMQAGKRTLDFILDTVSAKH--SLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQE 312 (360)
Q Consensus 236 ~~~~-~~~~~~~~~~d~vid~~g~~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 312 (360)
+.+. +..+...+++|+++||++... .+..++++++++|+++.+|.......++...++.+++++.|+..++++++++
T Consensus 78 ~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~g~~~~~~e 157 (168)
T d1piwa2 78 TLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQ 157 (168)
T ss_dssp GGGTSCHHHHSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSSCCEEECGGGCBSCEEEECCCCCHHHHHH
T ss_pred ccchHHHHHhhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccccccccHHHHHhCCcEEEEEeeCCHHHHHH
Confidence 8765 334455778999999987643 4678899999999999999888778888888999999999999999999999
Q ss_pred HHHHHhcCCCc
Q 018158 313 MMNVCGKYNIT 323 (360)
Q Consensus 313 ~~~~l~~~~l~ 323 (360)
+++++++|+++
T Consensus 158 ~l~li~~gkIk 168 (168)
T d1piwa2 158 LLKLVSEKDIK 168 (168)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHhCCCC
Confidence 99999999875
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.94 E-value=7.2e-27 Score=190.22 Aligned_cols=162 Identities=29% Similarity=0.533 Sum_probs=146.1
Q ss_pred CCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe
Q 018158 155 IAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI 234 (360)
Q Consensus 155 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v 234 (360)
++++++|+++|++.|||+++++.. +++|++|+|+|+|++|++++|+||.+|++|+++++++++++.+++ +|+++++
T Consensus 1 v~f~~aA~l~ca~~Ta~~al~~~~---~~~g~~VlV~GaG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~-~Ga~~~i 76 (166)
T d1llua2 1 VEFAEIAPILCAGVTVYKGLKQTN---ARPGQWVAISGIGGLGHVAVQYARAMGLHVAAIDIDDAKLELARK-LGASLTV 76 (166)
T ss_dssp SCHHHHGGGGTHHHHHHHHHHHHT---CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTCSEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhC---CCCCCEEEEeeccccHHHHHHHHHHcCCccceecchhhHHHhhhc-cCccccc
Confidence 578999999999999999998765 559999999999999999999999999999999999999999999 9999999
Q ss_pred eCccHHHHH---hcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHH
Q 018158 235 LSTNAMQMQ---AGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQ 311 (360)
Q Consensus 235 ~~~~~~~~~---~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 311 (360)
|+.+.+... ....+.+.++++++....++.++++++++|+++.+|...+..+++...++.+++++.|+..+++++++
T Consensus 77 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~~~~~d~~ 156 (166)
T d1llua2 77 NARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQ 156 (166)
T ss_dssp ETTTSCHHHHHHHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHH
T ss_pred cccchhHHHHHHHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEecCCCccCCHHHHHhCCcEEEEEeecCHHHHH
Confidence 987764332 23567888888888888899999999999999999988888888999999999999999999999999
Q ss_pred HHHHHHhcC
Q 018158 312 EMMNVCGKY 320 (360)
Q Consensus 312 ~~~~~l~~~ 320 (360)
++++++++|
T Consensus 157 e~l~l~~~G 165 (166)
T d1llua2 157 EALDFAGEG 165 (166)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHCc
Confidence 999999887
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=1.3e-26 Score=189.00 Aligned_cols=165 Identities=45% Similarity=0.786 Sum_probs=144.9
Q ss_pred CCCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE
Q 018158 154 NIAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF 233 (360)
Q Consensus 154 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~ 233 (360)
..+++.+|+++|++.|+|+++++.. +++|++|+|+|+|++|++++|+||.+|++++++++++++++.+++ +|++++
T Consensus 3 ~~~~a~~Apl~Cag~Tay~al~~~~---~~~G~~VlI~GaG~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~-lGad~~ 78 (168)
T d1uufa2 3 QEQLAAVAPLLCAGITTYSPLRHWQ---AGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-LGADEV 78 (168)
T ss_dssp GGGHHHHGGGGTHHHHHHHHHHHTT---CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HTCSEE
T ss_pred cccHHHHHHHHhHHHHHHHHHHHhC---CCCCCEEEEeccchHHHHHHHHhhcccccchhhccchhHHHHHhc-cCCcEE
Confidence 3456788899999999999998654 559999999999999999999999999999999999999999998 999999
Q ss_pred eeCccHHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-cccChhhHhccCcEEEEeecCCHHHHHH
Q 018158 234 ILSTNAMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-FELPSFPLIFGKRSVKGSMTGGMRETQE 312 (360)
Q Consensus 234 v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 312 (360)
+++.+........+++|++||++|....+..++++++++|+++.+|...+. ..+....++.+++++.|+..++++++++
T Consensus 79 i~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~l~~k~~~i~Gs~~~~~~d~~e 158 (168)
T d1uufa2 79 VNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQE 158 (168)
T ss_dssp EETTCHHHHHTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHHHHHH
T ss_pred EECchhhHHHHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCCcccccHHHHHHCCcEEEEEeecCHHHHHH
Confidence 999998777777889999999999988899999999999999999986643 4567778889999999999999999999
Q ss_pred HHHHHhcCCC
Q 018158 313 MMNVCGKYNI 322 (360)
Q Consensus 313 ~~~~l~~~~l 322 (360)
++++++++++
T Consensus 159 ~l~l~a~~~I 168 (168)
T d1uufa2 159 MLDFCAEHGI 168 (168)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHcCC
Confidence 9999988764
|
| >d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.94 E-value=2.8e-27 Score=189.23 Aligned_cols=148 Identities=17% Similarity=0.213 Sum_probs=125.0
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
+||.++...+++..+++++++.|+|++|||||||++++||++|++.+.|.++ ....|.++|+|++|+|++ ..++.|+
T Consensus 4 ~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~~--~~~~~~~ 81 (152)
T d1xa0a1 4 FQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQHPRFR 81 (152)
T ss_dssp EEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEE--CCSSSCC
T ss_pred eEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeeec--cCCCccc
Confidence 7888887777777888999999999999999999999999999999998775 456899999999999998 5567899
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|+..... .+...+|+|+||+.+|+++++++|++++. +||+++++++
T Consensus 82 ~g~~v~~~~~~-----------------------------~~~~~~G~~aEy~~v~~~~~~~iP~~l~~-~aa~l~~a~~ 131 (152)
T d1xa0a1 82 EGDEVIATGYE-----------------------------IGVTHFGGYSEYARLHGEWLVPLPKGLER-IAQEISLAEL 131 (152)
T ss_dssp TTCEEEEESTT-----------------------------BTTTBCCSSBSEEEECGGGCEECCTTHHH-HEEEEEGGGH
T ss_pred cCCEEEEecCc-----------------------------cccccCCCcceeeeehhhccccCCCCCCH-HHHHHHHHHH
Confidence 99999753211 12245799999999999999999999985 6888999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEEc
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIVG 192 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~G 192 (360)
|||.++....+ + +|++|||+|
T Consensus 132 ta~~~~~~~~~--~-~G~tVL~l~ 152 (152)
T d1xa0a1 132 PQALKRILRGE--L-RGRTVVRLA 152 (152)
T ss_dssp HHHHHHHHHTC--C-CSEEEEECC
T ss_pred HHHHHHHHhcC--C-CCCEEEEcC
Confidence 98888876654 3 599999975
|
| >d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=99.94 E-value=8.6e-27 Score=180.57 Aligned_cols=130 Identities=16% Similarity=0.204 Sum_probs=113.8
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCC-CCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGI-TMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|||.++.-++ +++++++++.|+|+++||+||+++++||++|++.++|.++. ..+|.++|||++|+|
T Consensus 1 MkA~~~~~~G--~~l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~V----------- 67 (131)
T d1iz0a1 1 MKAWVLKRLG--GPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVV----------- 67 (131)
T ss_dssp CEEEEECSTT--SCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEE-----------
T ss_pred CcEEEEccCC--CCCEEEEccCCCCCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEee-----------
Confidence 5666665554 45999999999999999999999999999999999998753 478999999999999
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++. ..+|+|+||+.++++.++++|+++++++||++++.+.
T Consensus 68 vGd~V~~~-----------------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ 112 (131)
T d1iz0a1 68 EGRRYAAL-----------------------------------VPQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAE 112 (131)
T ss_dssp TTEEEEEE-----------------------------------CSSCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHH
T ss_pred ccceEEEE-----------------------------------eccCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHH
Confidence 39999863 3459999999999999999999999999999999999
Q ss_pred hhhchhhccCCCCCCCCcEEEEE
Q 018158 169 TVFCPMKDNNLIDSPAKKRIGIV 191 (360)
Q Consensus 169 ta~~~l~~~~~~~~~~~~~vlI~ 191 (360)
|||+++.+.++ .|++||++
T Consensus 113 Ta~~al~~~g~----~g~tvl~l 131 (131)
T d1iz0a1 113 AAFRALLDRGH----TGKVVVRL 131 (131)
T ss_dssp HHHHHTTCTTC----CBEEEEEC
T ss_pred HHHHHHHhccc----CCCEEEEC
Confidence 99999987552 78998863
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.94 E-value=1.3e-26 Score=189.34 Aligned_cols=163 Identities=23% Similarity=0.343 Sum_probs=147.6
Q ss_pred CCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCe
Q 018158 155 IAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADE 232 (360)
Q Consensus 155 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~ 232 (360)
+++.+||+++|++.|||+++++.. ++++++|+|+|+ |++|++++|+++.+|+ +|+++++++++++.+++ +|+++
T Consensus 1 l~~~eAA~l~c~~~Ta~~al~~~~---~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~Ga~~ 76 (170)
T d1jvba2 1 LNAVEAAPLTCSGITTYRAVRKAS---LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-AGADY 76 (170)
T ss_dssp SCHHHHGGGGTHHHHHHHHHHHTT---CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-HTCSE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhC---CCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-cCCce
Confidence 578999999999999999998865 569999999997 9999999999999996 79999999999999999 99999
Q ss_pred EeeCccHHHHHh-----cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCH
Q 018158 233 FILSTNAMQMQA-----GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGM 307 (360)
Q Consensus 233 ~v~~~~~~~~~~-----~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 307 (360)
++++++.+.... .++++|++|||+|....++.++++++++|+++.+|.......++...++.+++++.|+..+++
T Consensus 77 ~i~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~Gs~~~~~ 156 (170)
T d1jvba2 77 VINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQ 156 (170)
T ss_dssp EEETTTSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCCCCCHHHHHHHTCEEEECCSCCH
T ss_pred eeccCCcCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccCccccCHHHHHhCCcEEEEEecCCH
Confidence 998877533322 267799999999998888999999999999999999888889999999999999999999999
Q ss_pred HHHHHHHHHHhcCC
Q 018158 308 RETQEMMNVCGKYN 321 (360)
Q Consensus 308 ~~~~~~~~~l~~~~ 321 (360)
++++++++++++|+
T Consensus 157 ~d~~~~l~lv~~GK 170 (170)
T d1jvba2 157 SDFLGIMRLAEAGK 170 (170)
T ss_dssp HHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999999986
|
| >d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=99.94 E-value=5.8e-28 Score=195.35 Aligned_cols=154 Identities=20% Similarity=0.193 Sum_probs=131.7
Q ss_pred cccceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCC
Q 018158 8 HTQSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKN 86 (360)
Q Consensus 8 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~ 86 (360)
+|+||+++...+....+++++++.|++++|||||||++++||++|++.+.|.++ ...+|.++|+|++|+|++ +.+++
T Consensus 2 ~~~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~~--~~~~~ 79 (162)
T d1tt7a1 2 TLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--SNDPR 79 (162)
T ss_dssp CEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEE--CSSTT
T ss_pred CcEEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeeccccccc--ccccc
Confidence 568999998888889999999999999999999999999999999999999875 346678999999999998 55678
Q ss_pred CCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccch
Q 018158 87 FKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCA 166 (360)
Q Consensus 87 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~ 166 (360)
+++||+|+..... .+...+|+|+||+.+|+++++++|+++++++||++++.
T Consensus 80 ~~~g~~v~~~~~~-----------------------------~g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~ 130 (162)
T d1tt7a1 80 FAEGDEVIATSYE-----------------------------LGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLL 130 (162)
T ss_dssp CCTTCEEEEESTT-----------------------------BTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCST
T ss_pred cccceeeEeeecc-----------------------------ceeccccccceEEEecHHHEEECCCCCCHHHHHHHHHH
Confidence 9999999863321 23356799999999999999999999999999999999
Q ss_pred hhhhhchhhccCCCCCCCCcEEEEEcC-Ch
Q 018158 167 GITVFCPMKDNNLIDSPAKKRIGIVGL-GG 195 (360)
Q Consensus 167 ~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~ 195 (360)
+.|||.++.... ...+++|||.|+ |.
T Consensus 131 ~~ta~~~~~~~~---~~~~~~Vli~ga~G~ 157 (162)
T d1tt7a1 131 TIVDREVSLEET---PGALKDILQNRIQGR 157 (162)
T ss_dssp TSEEEEECSTTH---HHHHHHTTTTCCSSE
T ss_pred HHHHHHHHHhcC---CCCCCEEEEECCcce
Confidence 999998876543 225677888877 54
|
| >d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=4.3e-26 Score=180.31 Aligned_cols=137 Identities=14% Similarity=0.206 Sum_probs=116.3
Q ss_pred cceeEEeccCCCCCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC-CCCCCCccccccceEEEEecCCCCCCC
Q 018158 10 QSVVGWAAHDPSGKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG-ITMYPVVPGHEITGIITKVGSNVKNFK 88 (360)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 88 (360)
|||+++..++++..+++++++.|+|++|||+|||.+++||++|++...|.++ ...+|.++|+|++|+|+++|. ..++
T Consensus 1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~~~--~~~~ 78 (146)
T d1o89a1 1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSED--PRFH 78 (146)
T ss_dssp CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEECS--TTCC
T ss_pred CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccceeecc--CCcc
Confidence 7888888788878899999999999999999999999999999999999875 346789999999999999876 4799
Q ss_pred CCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCCccccccccchhh
Q 018158 89 VGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIAMDAAAPLLCAGI 168 (360)
Q Consensus 89 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 168 (360)
+||+|++.... .+...+|+|+||+.+|+++++++|+++|+++||++++++.
T Consensus 79 ~g~~v~~~~~~-----------------------------~g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~ 129 (146)
T d1o89a1 79 AGQEVLLTGWG-----------------------------VGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNF 129 (146)
T ss_dssp TTCEEEEECTT-----------------------------BTTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHH
T ss_pred ceeeEEeeccc-----------------------------ceecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHH
Confidence 99999863321 2235679999999999999999999999999999999999
Q ss_pred hhhchhhcc
Q 018158 169 TVFCPMKDN 177 (360)
Q Consensus 169 ta~~~l~~~ 177 (360)
||+..+..+
T Consensus 130 tA~~~~~~~ 138 (146)
T d1o89a1 130 AEAIINNQI 138 (146)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHHHhh
Confidence 987666543
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.93 E-value=1.1e-25 Score=183.65 Aligned_cols=165 Identities=26% Similarity=0.470 Sum_probs=148.9
Q ss_pred CCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe
Q 018158 155 IAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI 234 (360)
Q Consensus 155 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v 234 (360)
+|+++||+++|++.|||++++... +++|++|+|+|+|++|++++|+++..|++|++++++++|++.+++ +|+++++
T Consensus 1 ls~eeAA~l~~~~~Ta~~al~~~~---~~~g~~vlv~G~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~-~Ga~~~~ 76 (168)
T d1rjwa2 1 LSFEEAAPIFCAGVTTYKALKVTG---AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE-LGADLVV 76 (168)
T ss_dssp SCHHHHGGGGTHHHHHHHHHHHHT---CCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCSEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhC---CCCCCEEEEeecccchhhhhHHHhcCCCeEeccCCCHHHhhhhhh-cCcceec
Confidence 578999999999999999998776 669999999999999999999999999999999999999999999 9999999
Q ss_pred eCccHHHH---HhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHH
Q 018158 235 LSTNAMQM---QAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQ 311 (360)
Q Consensus 235 ~~~~~~~~---~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 311 (360)
++.+.+.. +....+.|.++++++....+..++++++++|+++.+|...+..+++...++.+++++.|+..+++++++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~ 156 (168)
T d1rjwa2 77 NPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQ 156 (168)
T ss_dssp CTTTSCHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHH
T ss_pred ccccchhhhhcccccCCCceEEeecCCHHHHHHHHHHhccCCceEecccccCCCCCCHHHHHHCCcEEEEEeeCCHHHHH
Confidence 98776332 333566777778888888899999999999999999998888888999999999999999999999999
Q ss_pred HHHHHHhcCCCc
Q 018158 312 EMMNVCGKYNIT 323 (360)
Q Consensus 312 ~~~~~l~~~~l~ 323 (360)
++++++++|+++
T Consensus 157 ~~l~l~~~Gkik 168 (168)
T d1rjwa2 157 EALQFAAEGKVK 168 (168)
T ss_dssp HHHHHHHTTSCC
T ss_pred HHHHHHHhCCCC
Confidence 999999999875
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=1.5e-25 Score=183.70 Aligned_cols=161 Identities=19% Similarity=0.262 Sum_probs=139.8
Q ss_pred CCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE
Q 018158 155 IAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF 233 (360)
Q Consensus 155 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~ 233 (360)
+|+++||++++++.|||+++.+..+++ +|++|||+|+ |++|++++|+||.+|++|+++++++++++.+++ +|++++
T Consensus 1 ls~~~AA~l~~~~~TA~~al~~~~~~~--~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~-~Ga~~v 77 (174)
T d1yb5a2 1 LDFKQGAAIGIPYFTAYRALIHSACVK--AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ-NGAHEV 77 (174)
T ss_dssp SCHHHHTTTHHHHHHHHHHHHTTSCCC--TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCSEE
T ss_pred CCHHHHHHhHHHHHHHHHHHHHHhCCC--CCCEEEEEeccccccccccccccccCcccccccccccccccccc-cCcccc
Confidence 578999999999999999998776655 9999999998 999999999999999999999999999999998 999999
Q ss_pred eeCccHHHHHh-----cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecC--C
Q 018158 234 ILSTNAMQMQA-----GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTG--G 306 (360)
Q Consensus 234 v~~~~~~~~~~-----~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~ 306 (360)
+|+++.+..+. .++++|++||++|.. .++.++++++++|+++.+|... ..+++...++.+++++.++... +
T Consensus 78 i~~~~~~~~~~i~~~t~~~g~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~k~~~i~g~~~~~~~ 155 (174)
T d1yb5a2 78 FNHREVNYIDKIKKYVGEKGIDIIIEMLANV-NLSKDLSLLSHGGRVIVVGSRG-TIEINPRDTMAKESSIIGVTLFSST 155 (174)
T ss_dssp EETTSTTHHHHHHHHHCTTCEEEEEESCHHH-HHHHHHHHEEEEEEEEECCCCS-CEEECTHHHHTTTCEEEECCGGGCC
T ss_pred cccccccHHHHhhhhhccCCceEEeecccHH-HHHHHHhccCCCCEEEEEecCC-CCCCCHHHHHHCCCEEEEEEecCCC
Confidence 99987643322 277899999999965 6899999999999999999754 5777888889999999998643 5
Q ss_pred HHHHHHHHHHHhcC
Q 018158 307 MRETQEMMNVCGKY 320 (360)
Q Consensus 307 ~~~~~~~~~~l~~~ 320 (360)
+++++++++++.++
T Consensus 156 ~~~~~~~~~~l~~g 169 (174)
T d1yb5a2 156 KEEFQQYAAALQAG 169 (174)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 67788888777654
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=99.93 E-value=4.1e-25 Score=180.91 Aligned_cols=163 Identities=21% Similarity=0.297 Sum_probs=140.7
Q ss_pred CccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCCCeEe
Q 018158 156 AMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGADEFI 234 (360)
Q Consensus 156 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~~~~v 234 (360)
+++.+++++|++.|||+++.+..+++ +|++|+|+|+|++|++++|+|+.+|++ |++++++++|++.+++ +|+++++
T Consensus 2 P~e~aapl~ca~~Ta~~a~~~~~~~~--~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~-~Ga~~~i 78 (174)
T d1f8fa2 2 PIELLGPLGCGIQTGAGACINALKVT--PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ-LGATHVI 78 (174)
T ss_dssp CGGGTGGGGTHHHHHHHHHHTTTCCC--TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH-HTCSEEE
T ss_pred CHHHHHHHhhHHHHHHHHHHHhhCCC--CCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHH-cCCeEEE
Confidence 46789999999999999987776655 999999999999999999999999995 6778889999999998 9999999
Q ss_pred eCccHHHHHh---c-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC--CCcccChhhHhccCcEEEEeecCC--
Q 018158 235 LSTNAMQMQA---G-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE--APFELPSFPLIFGKRSVKGSMTGG-- 306 (360)
Q Consensus 235 ~~~~~~~~~~---~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~~-- 306 (360)
|+++.+..+. . +.++|++|||+|....++.++++++++|+++.+|... ...+++...++.+++++.|+..++
T Consensus 79 ~~~~~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g~~~ 158 (174)
T d1f8fa2 79 NSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGS 158 (174)
T ss_dssp ETTTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGSC
T ss_pred eCCCcCHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCCcccccCHHHHHHCCCEEEEEEecCCC
Confidence 9887643332 2 4689999999999888999999999999999999754 345788888999999999987543
Q ss_pred -HHHHHHHHHHHhcCC
Q 018158 307 -MRETQEMMNVCGKYN 321 (360)
Q Consensus 307 -~~~~~~~~~~l~~~~ 321 (360)
+++++++++++++|+
T Consensus 159 ~~~~~~~~~~l~~~Gk 174 (174)
T d1f8fa2 159 PKKFIPELVRLYQQGK 174 (174)
T ss_dssp HHHHHHHHHHHHHTTS
T ss_pred hHHHHHHHHHHHHcCC
Confidence 577899999999885
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.93 E-value=1.3e-25 Score=182.75 Aligned_cols=165 Identities=19% Similarity=0.276 Sum_probs=137.7
Q ss_pred CCccccccccchhhhhhchhhc---cCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC
Q 018158 155 IAMDAAAPLLCAGITVFCPMKD---NNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA 230 (360)
Q Consensus 155 ~~~~~aa~l~~~~~ta~~~l~~---~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~ 230 (360)
+|++|||+++++++|||++++. .+..+ +|++|||+|+ |++|.+++|+||.+|++|+++++++++.+.+++ +|+
T Consensus 1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~--~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~-lGa 77 (176)
T d1xa0a2 1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTP--ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-LGA 77 (176)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCG--GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-TTC
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHHHhCCCC--CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh-ccc
Confidence 5899999999999999977653 45544 8999999998 999999999999999999999999999999999 999
Q ss_pred CeEeeCccHHHH--Hh-cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEee--c
Q 018158 231 DEFILSTNAMQM--QA-GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSM--T 304 (360)
Q Consensus 231 ~~~v~~~~~~~~--~~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~--~ 304 (360)
++++|+++.... .. .++++|+|||++|+. .+...+++|+++|+++.+|...+ ..+++...++.|++++.|.. .
T Consensus 78 ~~vi~~~~~~~~~~~~~~~~gvD~vid~vgg~-~~~~~l~~l~~~Griv~~G~~~g~~~~~~~~~~~~k~~~i~Gv~~~~ 156 (176)
T d1xa0a2 78 KEVLAREDVMAERIRPLDKQRWAAAVDPVGGR-TLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVY 156 (176)
T ss_dssp SEEEECC---------CCSCCEEEEEECSTTT-THHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSS
T ss_pred ceeeecchhHHHHHHHhhccCcCEEEEcCCch-hHHHHHHHhCCCceEEEeecccCcccCCCHHHHHHCCcEEEEEeCCc
Confidence 999998765211 11 267899999999987 68999999999999999998754 55788999999999999954 4
Q ss_pred CCHHHHHHHHHHHhcCCCcc
Q 018158 305 GGMRETQEMMNVCGKYNITC 324 (360)
Q Consensus 305 ~~~~~~~~~~~~l~~~~l~~ 324 (360)
.+.+....+++.++ ++++|
T Consensus 157 ~~~~~~~~~~~~la-g~lkP 175 (176)
T d1xa0a2 157 CPMDLRLRIWERLA-GDLKP 175 (176)
T ss_dssp CCHHHHHHHHHHHH-TTTCC
T ss_pred CCHHHHHHHHHHHh-cccCC
Confidence 45677777777774 77765
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=99.93 E-value=2.6e-25 Score=181.85 Aligned_cols=162 Identities=27% Similarity=0.369 Sum_probs=142.5
Q ss_pred ccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEee
Q 018158 157 MDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFIL 235 (360)
Q Consensus 157 ~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~ 235 (360)
+.++|+++|++.|||+++.+.... +++|++|+|+|+|++|++++|+++.+|+ +|++++++++|++.+++ +|++++++
T Consensus 6 l~eaA~l~~~~~Ta~~al~~~~~~-~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~-~ga~~~i~ 83 (172)
T d1h2ba2 6 LVEMAPLADAGITAYRAVKKAART-LYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-LGADHVVD 83 (172)
T ss_dssp HHHTGGGGTHHHHHHHHHHHHHTT-CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-TTCSEEEE
T ss_pred HHHHhHHHhHHHHHHHHHHHhhhc-cCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhh-cccceeec
Confidence 578899999999999999876531 3499999999999999999999999998 68889999999999999 99999999
Q ss_pred CccHHHH--Hh--cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCCHHHHH
Q 018158 236 STNAMQM--QA--GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGGMRETQ 311 (360)
Q Consensus 236 ~~~~~~~--~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 311 (360)
+++.... .. .+.++|++|||+|....++.++++++++|+++.+|.. ...+++...++.+++++.|+..+++++++
T Consensus 84 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~-~~~~~~~~~l~~k~~~i~Gs~~~~~~d~~ 162 (172)
T d1h2ba2 84 ARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYG-GELRFPTIRVISSEVSFEGSLVGNYVELH 162 (172)
T ss_dssp TTSCHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCS-SCCCCCHHHHHHTTCEEEECCSCCHHHHH
T ss_pred CcccHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCc-ccccCCHHHHHhCCcEEEEEEecCHHHHH
Confidence 8765221 11 2678999999999988899999999999999999974 46788888999999999999999999999
Q ss_pred HHHHHHhcCC
Q 018158 312 EMMNVCGKYN 321 (360)
Q Consensus 312 ~~~~~l~~~~ 321 (360)
++++++++|+
T Consensus 163 ~~l~l~~~GK 172 (172)
T d1h2ba2 163 ELVTLALQGK 172 (172)
T ss_dssp HHHHHHHTTS
T ss_pred HHHHHHHcCC
Confidence 9999999985
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=8.6e-25 Score=178.58 Aligned_cols=163 Identities=17% Similarity=0.213 Sum_probs=141.6
Q ss_pred CCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeE
Q 018158 155 IAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEF 233 (360)
Q Consensus 155 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~ 233 (360)
+|+++||.+ .++.+||+++++.. +++|++|+|+|+|++|++++|+|+.+|+ +|++++++++|++.+++ +|++++
T Consensus 1 vS~e~Aal~-epla~a~~a~~~~~---~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~-~Ga~~~ 75 (171)
T d1pl8a2 1 VTFEEGALI-EPLSVGIHACRRGG---VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE-IGADLV 75 (171)
T ss_dssp SCHHHHHHH-HHHHHHHHHHHHHT---CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-TTCSEE
T ss_pred CCHHHHHHH-HHHHHHHHHHHHhC---CCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHH-hCCccc
Confidence 477888755 46678899998765 6699999999999999999999999999 79999999999999998 999999
Q ss_pred eeCccHHHH-------HhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecCC
Q 018158 234 ILSTNAMQM-------QAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGG 306 (360)
Q Consensus 234 v~~~~~~~~-------~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~ 306 (360)
++..+.+.. ...+.++|++|||+|....++.++++++++|+++.+|.+....+++...++.|++++.|+...
T Consensus 76 ~~~~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~~~~~~~~~~~~k~l~i~Gs~~~- 154 (171)
T d1pl8a2 76 LQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRY- 154 (171)
T ss_dssp EECSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSC-
T ss_pred ccccccccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHHCCcEEEEEeCC-
Confidence 887654221 112678999999999998899999999999999999998888889999999999999998754
Q ss_pred HHHHHHHHHHHhcCCCc
Q 018158 307 MRETQEMMNVCGKYNIT 323 (360)
Q Consensus 307 ~~~~~~~~~~l~~~~l~ 323 (360)
.++++++++++++|++.
T Consensus 155 ~~~~~~al~li~~gkid 171 (171)
T d1pl8a2 155 CNTWPVAISMLASKSVN 171 (171)
T ss_dssp SSCHHHHHHHHHTTSCC
T ss_pred HhHHHHHHHHHHcCCCC
Confidence 46799999999999873
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=99.92 E-value=7.8e-25 Score=178.57 Aligned_cols=162 Identities=19% Similarity=0.321 Sum_probs=137.5
Q ss_pred CccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEe
Q 018158 156 AMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFI 234 (360)
Q Consensus 156 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v 234 (360)
++++||+++|++.|+|+++.+...++ +|++|+|+|+|++|++++|++|.+|+ +|++++.+++|++.+++ +|+++++
T Consensus 2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~--~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~-~Ga~~~i 78 (174)
T d1e3ia2 2 NLERVCLIGCGFSSGYGAAINTAKVT--PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA-LGATDCL 78 (174)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTSCCC--TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTCSEEE
T ss_pred CHHHHHHhhhHHHHHHHHHHHhhCCC--CCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHH-hCCCccc
Confidence 46789999999999999987766655 99999999999999999999999999 69999999999999999 9999999
Q ss_pred eCccHH-H---H--HhcCCCcCEEEEcCCCcccHHHHHHHhccC-CEEEEeCCCCCCcccChhhHhccCcEEEEeecCC-
Q 018158 235 LSTNAM-Q---M--QAGKRTLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGG- 306 (360)
Q Consensus 235 ~~~~~~-~---~--~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~- 306 (360)
++...+ . . ...+.++|++|||+|....++.++++++++ |+++.+|...+..+++...++. ++++.|+..++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~~~i~~~~~~~-~k~i~Gs~~Gs~ 157 (174)
T d1e3ia2 79 NPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVIL-GRSINGTFFGGW 157 (174)
T ss_dssp CGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHT-TCEEEECSGGGC
T ss_pred CCccchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCccccchHHHhc-cCEEEEEEeeCC
Confidence 865432 1 1 222789999999999998999999999996 9999999988777888777654 56898887643
Q ss_pred --HHHHHHHHHHHhcCC
Q 018158 307 --MRETQEMMNVCGKYN 321 (360)
Q Consensus 307 --~~~~~~~~~~l~~~~ 321 (360)
.++++++++++.+|+
T Consensus 158 ~~~~d~p~li~l~~~GK 174 (174)
T d1e3ia2 158 KSVDSVPNLVSDYKNKK 174 (174)
T ss_dssp CHHHHHHHHHHHHHTTS
T ss_pred ChHHHHHHHHHHHHCcC
Confidence 577888888888875
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=99.92 E-value=7.6e-25 Score=180.76 Aligned_cols=161 Identities=26% Similarity=0.371 Sum_probs=138.3
Q ss_pred ccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEee
Q 018158 157 MDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFIL 235 (360)
Q Consensus 157 ~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~ 235 (360)
+..+|++.|++.|||+++.+..+++ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+++ +|+++++|
T Consensus 3 ~~~~a~~~c~~~ta~~al~~~~~~~--~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~-lGa~~vi~ 79 (182)
T d1vj0a2 3 LDVLAMAMCSGATAYHAFDEYPESF--AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE-IGADLTLN 79 (182)
T ss_dssp HHHHHHHTTHHHHHHHHHHTCSSCC--BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH-TTCSEEEE
T ss_pred HHHHHHhhcHHHHHHHHHHHHhCCC--CCCEEEEECCCccchhheeccccccccccccccccccccccccc-ccceEEEe
Confidence 3467889999999999998887755 99999999999999999999999999 79999999999999998 99999998
Q ss_pred CccHHH------HHhc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC--CcccChh-hHhccCcEEEEeec
Q 018158 236 STNAMQ------MQAG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA--PFELPSF-PLIFGKRSVKGSMT 304 (360)
Q Consensus 236 ~~~~~~------~~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~-~~~~~~~~i~~~~~ 304 (360)
+.+.+. ..+. +.++|+||||+|....++.++++++++|+++.+|.... .++++.. .++.|++++.|+..
T Consensus 80 ~~~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~ 159 (182)
T d1vj0a2 80 RRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWV 159 (182)
T ss_dssp TTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCC
T ss_pred ccccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCCCccccccHHHHHHCCcEEEEEEe
Confidence 876521 1111 67899999999998888999999999999999997653 3444443 46789999999999
Q ss_pred CCHHHHHHHHHHHhcC
Q 018158 305 GGMRETQEMMNVCGKY 320 (360)
Q Consensus 305 ~~~~~~~~~~~~l~~~ 320 (360)
++.+++++++++++++
T Consensus 160 ~~~~~~~~~~~~i~~~ 175 (182)
T d1vj0a2 160 SDTSHFVKTVSITSRN 175 (182)
T ss_dssp CCHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHC
Confidence 9999999999998875
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=99.92 E-value=2.1e-24 Score=176.21 Aligned_cols=161 Identities=17% Similarity=0.212 Sum_probs=137.5
Q ss_pred CCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe
Q 018158 155 IAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI 234 (360)
Q Consensus 155 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v 234 (360)
+|+++||.+ -++.+||+++++.. +++|++|+|+|+|++|++++|+||.+|++|++++++++|++.+++ +|++..+
T Consensus 1 VS~e~Aal~-ePla~a~~a~~~~~---~~~g~~vlV~G~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~ga~~~~ 75 (170)
T d1e3ja2 1 VSLEEGALL-EPLSVGVHACRRAG---VQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-CGADVTL 75 (170)
T ss_dssp SCHHHHHTH-HHHHHHHHHHHHHT---CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTCSEEE
T ss_pred CCHHHHHHH-HHHHHHHHHHHHhC---CCCCCEEEEEcccccchhhHhhHhhhcccccccchHHHHHHHHHH-cCCcEEE
Confidence 478888866 35678899998776 669999999999999999999999999999999999999999999 9998876
Q ss_pred eCccH----HH----H-HhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccChhhHhccCcEEEEeecC
Q 018158 235 LSTNA----MQ----M-QAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPSFPLIFGKRSVKGSMTG 305 (360)
Q Consensus 235 ~~~~~----~~----~-~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 305 (360)
+.+.. .. . ...+.++|++|||+|....++.++++++++|+++.+|......+++...++.+++++.|+...
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~gs~~~ 155 (170)
T d1e3ja2 76 VVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRY 155 (170)
T ss_dssp ECCTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSC
T ss_pred eccccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCCCCCcCHHHHHHCCCEEEEEECC
Confidence 54332 11 1 112678999999999988899999999999999999998877888999999999999998654
Q ss_pred CHHHHHHHHHHHhcCC
Q 018158 306 GMRETQEMMNVCGKYN 321 (360)
Q Consensus 306 ~~~~~~~~~~~l~~~~ 321 (360)
. ++++++++++++|+
T Consensus 156 ~-~~~~~ai~li~~Gk 170 (170)
T d1e3ja2 156 C-NDYPIALEMVASGR 170 (170)
T ss_dssp S-SCHHHHHHHHHTTS
T ss_pred H-HHHHHHHHHHHcCC
Confidence 4 57899999999885
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=99.92 E-value=2.6e-25 Score=181.35 Aligned_cols=146 Identities=23% Similarity=0.304 Sum_probs=125.3
Q ss_pred CCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE
Q 018158 155 IAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF 233 (360)
Q Consensus 155 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~ 233 (360)
+++++||++++++.|||+++++. + +++|++|+|+|+ |++|++++|+||.+|++|+++++++++++.+++ +|++++
T Consensus 1 ls~eeAA~l~~~~~TA~~al~~~-~--~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~-lGa~~~ 76 (171)
T d1iz0a2 1 LSPEEAAAFPVSFLTAYLALKRA-Q--ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-LGAEEA 76 (171)
T ss_dssp CCHHHHHTSHHHHHHHHHHHHHT-T--CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-TTCSEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHh-C--CCCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccc-ccccee
Confidence 57899999999999999999874 4 459999999998 999999999999999999999999999999998 999999
Q ss_pred eeCccHHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeecCC
Q 018158 234 ILSTNAMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMTGG 306 (360)
Q Consensus 234 v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 306 (360)
+|+.+.....+.++++|++||++|. .+..++++++++|+++.+|..++ ..+++...++.+++++.|+...+
T Consensus 77 i~~~~~~~~~~~~~g~D~v~d~~G~--~~~~~~~~l~~~G~~v~~G~~~g~~~~~~~~~~~~k~~~i~g~~~~~ 148 (171)
T d1iz0a2 77 ATYAEVPERAKAWGGLDLVLEVRGK--EVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTP 148 (171)
T ss_dssp EEGGGHHHHHHHTTSEEEEEECSCT--THHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHH
T ss_pred eehhhhhhhhhccccccccccccch--hHHHHHHHHhcCCcEEEEeCCCCCCCCccHHHHHHCCcEEEEEeCcC
Confidence 9998875555568899999999884 47999999999999999998764 55677888899999999986643
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=99.92 E-value=2.6e-24 Score=175.76 Aligned_cols=162 Identities=22% Similarity=0.261 Sum_probs=134.0
Q ss_pred ccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEee
Q 018158 157 MDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFIL 235 (360)
Q Consensus 157 ~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~ 235 (360)
+.+||++.|++.|+|+++.+...++ +|++|+|+|+|++|++++|+||.+|+ +|++++++++|++.+++ +|+++++|
T Consensus 2 P~eaa~lgCa~~Ta~~a~~~~a~~~--~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-lGa~~~i~ 78 (174)
T d1p0fa2 2 PLESCLIGCGFATGYGAAVNTAKVT--PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-LGATECLN 78 (174)
T ss_dssp CGGGGGGGTHHHHHHHHHHTTTCCC--TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-TTCSEEEC
T ss_pred HHHHHhhhhHHHHHHHHHHHhhCCC--CCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-cCCcEEEc
Confidence 5679999999999999987666655 99999999999999999999999998 69999999999999999 99999998
Q ss_pred CccHHH----H--HhcCCCcCEEEEcCCCcccHHHHHHHhcc-CCEEEEeCCCCCCcccChh-hHhccCcEEEEeecC--
Q 018158 236 STNAMQ----M--QAGKRTLDFILDTVSAKHSLGPILELLKV-NGTLSVVGAPEAPFELPSF-PLIFGKRSVKGSMTG-- 305 (360)
Q Consensus 236 ~~~~~~----~--~~~~~~~d~vid~~g~~~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~~~~~~-- 305 (360)
+++.+. . ...++++|++||++|....+...+..+++ +|+++.+|.......++.. .++.+++++.|+..+
T Consensus 79 ~~~~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~ 158 (174)
T d1p0fa2 79 PKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGF 158 (174)
T ss_dssp GGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGGGC
T ss_pred CCCchhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCEEEEEEeCCC
Confidence 765431 1 12267999999999998888889888877 4999999987654444433 234467899999854
Q ss_pred CHHHHHHHHHHHhcCC
Q 018158 306 GMRETQEMMNVCGKYN 321 (360)
Q Consensus 306 ~~~~~~~~~~~l~~~~ 321 (360)
..++++++++++.+|+
T Consensus 159 ~~~d~~~lidl~~~gK 174 (174)
T d1p0fa2 159 KGEEVSRLVDDYMKKK 174 (174)
T ss_dssp CGGGHHHHHHHHHTTS
T ss_pred CHHHHHHHHHHHHcCC
Confidence 3578999999998875
|
| >d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=99.91 E-value=1.1e-26 Score=190.73 Aligned_cols=155 Identities=17% Similarity=0.187 Sum_probs=126.5
Q ss_pred cceeEEeccCCCC-C--ceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCC----------CCCCCCccccccceE
Q 018158 10 QSVVGWAAHDPSG-K--ITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWG----------ITMYPVVPGHEITGI 76 (360)
Q Consensus 10 ~~~~~~~~~~~~~-~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~----------~~~~p~~~G~e~~G~ 76 (360)
+||+.+..+++|. . ++..++|.|+|+++||||||++++||++|++.++|.++ ...+|.++|+|++|+
T Consensus 4 ~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~g~ 83 (175)
T d1gu7a1 4 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFE 83 (175)
T ss_dssp EEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCEEE
T ss_pred eEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCcccccccccc
Confidence 7888887766654 3 44557778888999999999999999999999988764 235677899999999
Q ss_pred EEEecCCCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCC
Q 018158 77 ITKVGSNVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIA 156 (360)
Q Consensus 77 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~ 156 (360)
|++.|..+..++.||+|.... ...|+|+||+.+++++++++|++++
T Consensus 84 V~~~~~~~~~~~~g~~v~~~~----------------------------------~~~g~~aey~~v~~~~~~~iP~~~~ 129 (175)
T d1gu7a1 84 VIKVGSNVSSLEAGDWVIPSH----------------------------------VNFGTWRTHALGNDDDFIKLPNPAQ 129 (175)
T ss_dssp EEEECTTCCSCCTTCEEEESS----------------------------------SCCCCSBSEEEEEGGGEEEECCHHH
T ss_pred cccccccccccccccceeccc----------------------------------cccccccceeeehhhhccCCCccch
Confidence 999999999999999998532 3468999999999999999999876
Q ss_pred ccccccccchhhhhhchhhc-cCCCCCCCCcEEEEEcC--ChHHHHHHH
Q 018158 157 MDAAAPLLCAGITVFCPMKD-NNLIDSPAKKRIGIVGL--GGLGHVAVK 202 (360)
Q Consensus 157 ~~~aa~l~~~~~ta~~~l~~-~~~~~~~~~~~vlI~Ga--g~vG~~aiq 202 (360)
.+. ++++..+|||+++.. ...+ ++|+++||.|+ |++|++++|
T Consensus 130 ~~~--a~~~~~~ta~~~l~~~~~~~--~~g~~vli~gaa~~gvG~~~iQ 174 (175)
T d1gu7a1 130 SKA--NGKPNGLTDAKSIETLYDGT--KPLHELYQDGVANSKDGKQLIT 174 (175)
T ss_dssp HHH--TTCSCCCCCCCCEEEECCSS--SCHHHHHHHHHHTGGGSCEEEE
T ss_pred hhh--hccchHHHHHHHHHHHhcCC--CCCCEEEEECccchhhhheEEe
Confidence 444 445788899999864 3444 49999999974 779988776
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=99.91 E-value=2.5e-24 Score=175.75 Aligned_cols=163 Identities=14% Similarity=0.188 Sum_probs=134.7
Q ss_pred CCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeE
Q 018158 155 IAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEF 233 (360)
Q Consensus 155 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~ 233 (360)
+++++|+.+++.+.|+|++++... +++|++|+|+|+|++|++++|+||.+|+ +|++++++++|++.+++ +|++++
T Consensus 1 ip~e~A~~l~~~~~ta~~a~~~a~---~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~-lGa~~~ 76 (174)
T d1jqba2 1 MPLENAVMITDMMTTGFHGAELAD---IEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKF-YGATDI 76 (174)
T ss_dssp SCHHHHHTTTTHHHHHHHHHHHTT---CCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHH-HTCSEE
T ss_pred CCHHHHHHhhhHHHHHHHHHHHhC---CCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHh-hCcccc
Confidence 468899999999999999998754 5599999999999999999999999998 69999999999999998 999999
Q ss_pred eeCccHHHHH---hc--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccC--h--hhHhccCcEEEEeec
Q 018158 234 ILSTNAMQMQ---AG--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELP--S--FPLIFGKRSVKGSMT 304 (360)
Q Consensus 234 v~~~~~~~~~---~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~--~--~~~~~~~~~i~~~~~ 304 (360)
+|+++.+..+ .. +.++|++|||+|....++.++++++++|+++.+|.+.....++ . .....+++++.++..
T Consensus 77 i~~~~~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~ 156 (174)
T d1jqba2 77 LNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLC 156 (174)
T ss_dssp ECGGGSCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBCC
T ss_pred ccccchhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEecC
Confidence 9988753332 22 6789999999999888999999999999999999876433322 2 223457789999877
Q ss_pred CCH-HHHHHHHHHHhcCC
Q 018158 305 GGM-RETQEMMNVCGKYN 321 (360)
Q Consensus 305 ~~~-~~~~~~~~~l~~~~ 321 (360)
... ...+++++++.+|+
T Consensus 157 ~~~r~~~e~l~~li~~gk 174 (174)
T d1jqba2 157 PGGRLRAERLRDMVVYNR 174 (174)
T ss_dssp CCHHHHHHHHHHHHHTTS
T ss_pred CCCcccHHHHHHHHHcCC
Confidence 654 44577778888775
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.90 E-value=5.4e-24 Score=175.87 Aligned_cols=163 Identities=15% Similarity=0.171 Sum_probs=134.7
Q ss_pred cccccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeC
Q 018158 158 DAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILS 236 (360)
Q Consensus 158 ~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~ 236 (360)
+|||+++++++|||+++.+..+++ +|++|||+|+ |++|++++|+|+.+|++|+++++++++++.+++ +|+++++++
T Consensus 1 eeAA~l~~~~~TA~~al~~~~~~~--~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~-~Ga~~vi~~ 77 (183)
T d1pqwa_ 1 NEAATFGVAYLTAWHSLCEVGRLS--PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR-LGVEYVGDS 77 (183)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSCCC--TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT-TCCSEEEET
T ss_pred CchhhhhHHHHHHHHHHHHHhCCC--CCCEEEEECCCCCcccccchhhccccccceeeeccccccccccc-ccccccccC
Confidence 579999999999999998877755 9999999998 999999999999999999999999999999998 999999998
Q ss_pred ccHHHHHhc-----CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCccc-ChhhHhccCcEEEEeecCC----
Q 018158 237 TNAMQMQAG-----KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFEL-PSFPLIFGKRSVKGSMTGG---- 306 (360)
Q Consensus 237 ~~~~~~~~~-----~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~i~~~~~~~---- 306 (360)
++.+..... ++++|++||++|+. .++.++++++++|+++.+|..+..... .....+.++.++.++....
T Consensus 78 ~~~~~~~~v~~~t~~~g~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (183)
T d1pqwa_ 78 RSVDFADEILELTDGYGVDVVLNSLAGE-AIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLKL 156 (183)
T ss_dssp TCSTHHHHHHHHTTTCCEEEEEECCCTH-HHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHHHH
T ss_pred CccCHHHHHHHHhCCCCEEEEEecccch-HHHHHHHHhcCCCEEEEEccCCCCCCcccchHHHhCCcEEEEEEccceecc
Confidence 876433322 67899999999985 689999999999999999976533222 2223456788888765421
Q ss_pred -----HHHHHHHHHHHhcCCCcc
Q 018158 307 -----MRETQEMMNVCGKYNITC 324 (360)
Q Consensus 307 -----~~~~~~~~~~l~~~~l~~ 324 (360)
++.++++++++++|+++|
T Consensus 157 ~~~~~~~~~~~v~~~i~~G~i~p 179 (183)
T d1pqwa_ 157 QPARYRQLLQHILQHVADGKLEV 179 (183)
T ss_dssp CHHHHHHHHHHHHHHHHTTSSCC
T ss_pred CHHHHHHHHHHHHHHHHCCCCce
Confidence 355788889999999987
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.89 E-value=5e-23 Score=168.87 Aligned_cols=163 Identities=18% Similarity=0.221 Sum_probs=131.5
Q ss_pred CccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEe
Q 018158 156 AMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFI 234 (360)
Q Consensus 156 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v 234 (360)
++++||+++|++.|+|+++.+..+++ ||++|+|+|+|++|++++|+++.+|+ +|+++++++++++.+++ +|+++++
T Consensus 2 P~e~aa~l~ca~~Tay~al~~~~~~~--~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~-lGa~~~i 78 (176)
T d2fzwa2 2 PLDKVCLLGCGISTGYGAAVNTAKLE--PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE-FGATECI 78 (176)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCC--TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-HTCSEEE
T ss_pred CHHHHhHhhcHHHHHHHHHHHhhCCC--CCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHH-hCCcEEE
Confidence 36789999999999999997766655 99999999999999999999999997 68889999999999998 9999999
Q ss_pred eCccH-HHH-----HhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC--CCcccChhhHhccCcEEEEeecCC
Q 018158 235 LSTNA-MQM-----QAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE--APFELPSFPLIFGKRSVKGSMTGG 306 (360)
Q Consensus 235 ~~~~~-~~~-----~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~~ 306 (360)
|+.+. +.. ...+.++|++||++|....+..+..+++++|+++.++... .....+....+.+++++.|+..++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~ 158 (176)
T d2fzwa2 79 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGG 158 (176)
T ss_dssp CGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred eCCchhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccccccccccHHHHHCCCEEEEEeeeC
Confidence 88653 111 1126789999999999888899999999998888775443 222333334455788999988654
Q ss_pred ---HHHHHHHHHHHhcCC
Q 018158 307 ---MRETQEMMNVCGKYN 321 (360)
Q Consensus 307 ---~~~~~~~~~~l~~~~ 321 (360)
++++.++++++.+|+
T Consensus 159 ~~~~~d~~~li~l~~~GK 176 (176)
T d2fzwa2 159 WKSVESVPKLVSEYMSKK 176 (176)
T ss_dssp CCHHHHHHHHHHHHHTTS
T ss_pred CcHHHHHHHHHHHHHcCC
Confidence 567888888888875
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=99.89 E-value=2.1e-23 Score=172.98 Aligned_cols=163 Identities=18% Similarity=0.222 Sum_probs=132.8
Q ss_pred CCccccccccchhhhhhchhhccCCCCCCCCcEEEEE-cC-ChHHHHHHHHHHHcCCeEEEEeCChh----HHHHHHHHc
Q 018158 155 IAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIV-GL-GGLGHVAVKFGKAFGHHVTVISTSPS----KEKEAKELL 228 (360)
Q Consensus 155 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~-Ga-g~vG~~aiqla~~~G~~V~~~~~~~~----~~~~~~~~~ 228 (360)
+|+++||+++++++|||+++.+..+++ +|++++|+ |+ |++|++++|+||.+|++|+++.++.+ +.+.+++ +
T Consensus 1 ls~~~AA~l~~~~~TA~~~l~~~~~~~--~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~-l 77 (189)
T d1gu7a2 1 LTINQGATISVNPLTAYLMLTHYVKLT--PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKE-L 77 (189)
T ss_dssp CCHHHHHTCTTHHHHHHHHHHSSSCCC--TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHH-H
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHhCCC--CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhh-c
Confidence 588999999999999999999887766 99988887 66 99999999999999999999886544 3455667 9
Q ss_pred CCCeEeeCccHHH------HH----hcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCc
Q 018158 229 GADEFILSTNAMQ------MQ----AGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKR 297 (360)
Q Consensus 229 g~~~~v~~~~~~~------~~----~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~ 297 (360)
|+++++++++.+. .. ..++++|++||++|++ .+..++++|+++|+++.+|..++ +..++...++.+++
T Consensus 78 Gad~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~l~~k~~ 156 (189)
T d1gu7a2 78 GATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGK-SSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNF 156 (189)
T ss_dssp TCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHH-HHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCC
T ss_pred cccEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcc-hhhhhhhhhcCCcEEEEECCccCCCccCcHHHHHHCCc
Confidence 9999998765421 11 1267899999999976 57899999999999999997654 56788888999999
Q ss_pred EEEEeecCC---------HHHHHHHHHHHhcCC
Q 018158 298 SVKGSMTGG---------MRETQEMMNVCGKYN 321 (360)
Q Consensus 298 ~i~~~~~~~---------~~~~~~~~~~l~~~~ 321 (360)
++.|+.... .+.++++++++++|+
T Consensus 157 ~i~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk 189 (189)
T d1gu7a2 157 TSAGFWVTELLKNNKELKTSTLNQIIAWYEEGK 189 (189)
T ss_dssp EEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence 999976532 245677777877774
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=99.89 E-value=3.5e-23 Score=170.62 Aligned_cols=156 Identities=17% Similarity=0.222 Sum_probs=129.5
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
++++++++|||++|.+..+++ +|++|||+|+ |++|++++|+||..|++|+++++++++.+.+++ +|+++++++++.
T Consensus 8 ~~lg~~glTA~~al~~~~~v~--~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~-~Ga~~vi~~~~~ 84 (182)
T d1v3va2 8 GTIGMPGLTAYFGLLEVCGVK--GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ-IGFDAAFNYKTV 84 (182)
T ss_dssp TTTSHHHHHHHHHHHTTTCCC--SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCSEEEETTSC
T ss_pred HHHhhHHHHHHHHHHHHhCCC--CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHh-hhhhhhcccccc
Confidence 478889999999999888766 9999999999 999999999999999999999999999999999 999999998876
Q ss_pred HHHH-----hcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC-------CCcccChhhHhccCcEEEEeecCC-
Q 018158 240 MQMQ-----AGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE-------APFELPSFPLIFGKRSVKGSMTGG- 306 (360)
Q Consensus 240 ~~~~-----~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-------~~~~~~~~~~~~~~~~i~~~~~~~- 306 (360)
+... ..+.++|+|||++|.+ .+++++++++++|+++.+|..+ ....+....++.+++++.|+....
T Consensus 85 ~~~~~~~~~~~~~Gvd~v~D~vG~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~~ 163 (182)
T d1v3va2 85 NSLEEALKKASPDGYDCYFDNVGGE-FLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRW 163 (182)
T ss_dssp SCHHHHHHHHCTTCEEEEEESSCHH-HHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGGC
T ss_pred cHHHHHHHHhhcCCCceeEEecCch-hhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEecc
Confidence 3322 2267899999999965 6899999999999999999643 123455667899999999986643
Q ss_pred -H----HHHHHHHHHHhcC
Q 018158 307 -M----RETQEMMNVCGKY 320 (360)
Q Consensus 307 -~----~~~~~~~~~l~~~ 320 (360)
. +.++++++++.+|
T Consensus 164 ~~~~~~~~~~~l~~~i~~G 182 (182)
T d1v3va2 164 QGDVREKALRDLMKWVLEG 182 (182)
T ss_dssp CHHHHHHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHHHHHHhCc
Confidence 1 3356677777665
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=99.89 E-value=2.9e-23 Score=170.78 Aligned_cols=162 Identities=17% Similarity=0.218 Sum_probs=126.9
Q ss_pred CCccccccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE
Q 018158 155 IAMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF 233 (360)
Q Consensus 155 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~ 233 (360)
+|+++||+++++++|||++|.+..+++ +|++|+|+|+ |++|++++|+|+..|++|+++++++++++.+++ +|++++
T Consensus 1 isfe~AA~~~~~~~TA~~al~~~~~l~--~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~-lGa~~v 77 (179)
T d1qora2 1 ISFEQAAASFLKGLTVYYLLRKTYEIK--PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-AGAWQV 77 (179)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTSCCC--TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HTCSEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCC--CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh-cCCeEE
Confidence 589999999999999999998877755 9999999988 889999999999999999999999999999999 999999
Q ss_pred eeCccHHHHHh---c--CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCC-cccChhhHhcc-CcEEEEee---
Q 018158 234 ILSTNAMQMQA---G--KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAP-FELPSFPLIFG-KRSVKGSM--- 303 (360)
Q Consensus 234 v~~~~~~~~~~---~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~-~~~i~~~~--- 303 (360)
+|+++.+.... . +.++|+++|++|.. .+..++.+++++|+++.+|..... ...+...+..+ ++.+....
T Consensus 78 i~~~~~d~~~~v~~~t~g~g~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 156 (179)
T d1qora2 78 INYREEDLVERLKEITGGKKVRVVYDSVGRD-TWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQG 156 (179)
T ss_dssp EETTTSCHHHHHHHHTTTCCEEEEEECSCGG-GHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHH
T ss_pred EECCCCCHHHHHHHHhCCCCeEEEEeCccHH-HHHHHHHHHhcCCeeeecccccCCccccchhhhhccceEEEEeeEEee
Confidence 99888643322 2 67899999999876 689999999999999999876643 33444333332 33332211
Q ss_pred -cCCHH----HHHHHHHHHhcC
Q 018158 304 -TGGMR----ETQEMMNVCGKY 320 (360)
Q Consensus 304 -~~~~~----~~~~~~~~l~~~ 320 (360)
...++ .++++++++++|
T Consensus 157 ~~~~~~~~~~~~~~l~~lv~~G 178 (179)
T d1qora2 157 YITTREELTEASNELFSLIASG 178 (179)
T ss_dssp HCCSHHHHHHHHHHHHHHHHTT
T ss_pred ecCCHHHHHHHHHHHHHHHHCc
Confidence 12222 245566677665
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=99.89 E-value=1.4e-22 Score=165.91 Aligned_cols=163 Identities=21% Similarity=0.266 Sum_probs=134.6
Q ss_pred CccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEe
Q 018158 156 AMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFI 234 (360)
Q Consensus 156 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v 234 (360)
++++||+++|++.|+|+++.+..+++ +|++|+|+|+|++|++++++++..|+ +|++++++++|++.+++ +|+++++
T Consensus 2 P~e~aa~l~ca~~Tay~a~~~~a~~k--~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-~GAd~~i 78 (175)
T d1cdoa2 2 PLDTVCLLGCGVSTGFGAAVNTAKVE--PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-FGATDFV 78 (175)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCC--TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTCCEEE
T ss_pred CHHHHHHhhcHHHHHHHHHHHhhCCC--CCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHH-cCCcEEE
Confidence 36789999999999999997766655 99999999999999999999999988 69999999999999999 9999999
Q ss_pred eCccHHH----HHh--cCCCcCEEEEcCCCcccHHHHHHHhccCC-EEEEeCCCCCCcccChhhHhccCcEEEEeecCC-
Q 018158 235 LSTNAMQ----MQA--GKRTLDFILDTVSAKHSLGPILELLKVNG-TLSVVGAPEAPFELPSFPLIFGKRSVKGSMTGG- 306 (360)
Q Consensus 235 ~~~~~~~----~~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G-~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~- 306 (360)
|+.+.+. ... .++++|++||++|....+..++.+++++| .++..|........+...++.+++++.|+..+.
T Consensus 79 n~~~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~i~Gs~~G~~ 158 (175)
T d1cdoa2 79 NPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGF 158 (175)
T ss_dssp CGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEEEECSGGGC
T ss_pred cCCCcchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCcccCccHHHHHCCcEEEEEEEeCC
Confidence 9776421 111 26799999999999888888888887764 555566655555566666677889999997654
Q ss_pred --HHHHHHHHHHHhcCC
Q 018158 307 --MRETQEMMNVCGKYN 321 (360)
Q Consensus 307 --~~~~~~~~~~l~~~~ 321 (360)
+++++++++++.+|+
T Consensus 159 ~~~~d~~~~i~l~~~gK 175 (175)
T d1cdoa2 159 KGKDGVPKMVKAYLDKK 175 (175)
T ss_dssp CHHHHHHHHHHHHHTTS
T ss_pred cHHHHHHHHHHHHHcCC
Confidence 578999999998875
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.89 E-value=1e-22 Score=166.44 Aligned_cols=159 Identities=19% Similarity=0.268 Sum_probs=130.1
Q ss_pred CccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEe
Q 018158 156 AMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFI 234 (360)
Q Consensus 156 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v 234 (360)
++++||.++|++.|+|+++.+..+++ +|++|+|+|+|++|++++|+++.+|+ +|++++.+++|++.+++ +|+++++
T Consensus 3 P~e~aa~l~Ca~~T~~~Av~~~~~~~--~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-~GA~~~i 79 (176)
T d1d1ta2 3 PPEKVCLIGCGFSTGYGAAVKTGKVK--PGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-VGATECI 79 (176)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTSCCC--TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-HTCSEEE
T ss_pred CHHHHHhhhhHHHHHHHHHHHhhCCC--CCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-cCCcEEE
Confidence 47899999999999999987666655 99999999999999999999999996 79999999999999999 9999999
Q ss_pred eCccHHHH----H--hcCCCcCEEEEcCCCcccHHHHHHHhccC-CEEEEeCCCCCCcc--cChhhHhccCcEEEEeecC
Q 018158 235 LSTNAMQM----Q--AGKRTLDFILDTVSAKHSLGPILELLKVN-GTLSVVGAPEAPFE--LPSFPLIFGKRSVKGSMTG 305 (360)
Q Consensus 235 ~~~~~~~~----~--~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~--~~~~~~~~~~~~i~~~~~~ 305 (360)
|+++.+.. . ..+.++|++||++|....+..++..+.++ |+++.+|....... ++... +.++.++.|+..+
T Consensus 80 n~~~~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~-~~~~~~i~Gs~~G 158 (176)
T d1d1ta2 80 SPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPML-LFTGRTWKGCVFG 158 (176)
T ss_dssp CGGGCSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHH-HHTTCEEEECSGG
T ss_pred CccccchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHH-HhCCCEEEEEEEe
Confidence 97765321 1 23789999999999988778888877665 99999998765443 33333 4467899998865
Q ss_pred C---HHHHHHHHHHHh
Q 018158 306 G---MRETQEMMNVCG 318 (360)
Q Consensus 306 ~---~~~~~~~~~~l~ 318 (360)
+ ++++.+++++..
T Consensus 159 ~~~~~~dip~li~~~~ 174 (176)
T d1d1ta2 159 GLKSRDDVPKLVTEFL 174 (176)
T ss_dssp GCCHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHHHHHHh
Confidence 4 567777776643
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=99.88 E-value=3.1e-22 Score=163.99 Aligned_cols=163 Identities=18% Similarity=0.248 Sum_probs=131.4
Q ss_pred CccccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEe
Q 018158 156 AMDAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFI 234 (360)
Q Consensus 156 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v 234 (360)
++++||+++|++.|+|+++.+..+++ +|++|+|+|+|++|++++|+++..|+ +|++++++++|++.+++ +|+++++
T Consensus 2 Ple~aa~l~ca~~Tay~al~~~~~vk--~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-~Ga~~~i 78 (176)
T d2jhfa2 2 PLEKVCLIGCGFSTGYGSAVKVAKVT--QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-VGATECV 78 (176)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCC--TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTCSEEE
T ss_pred CHHHHhHhhcHHHHHHHHHHHhhCCC--CCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-hCCeeEE
Confidence 46789999999999999998777755 99999999999999999999999986 79999999999999999 9999999
Q ss_pred eCccHHH-H-----HhcCCCcCEEEEcCCCcccHHHHHHHhccCCEE-EEeCCCCCCc-ccChhhHhccCcEEEEeecCC
Q 018158 235 LSTNAMQ-M-----QAGKRTLDFILDTVSAKHSLGPILELLKVNGTL-SVVGAPEAPF-ELPSFPLIFGKRSVKGSMTGG 306 (360)
Q Consensus 235 ~~~~~~~-~-----~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~-v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~~ 306 (360)
++.+.+. . ...++++|++||++|....+..++..++++|.. +..+...... ......++.+++++.|+..++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~ 158 (176)
T d2jhfa2 79 NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGG 158 (176)
T ss_dssp CGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred ecCCchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEeC
Confidence 8765311 1 222679999999999998889999999987544 4444443322 223335667899999997654
Q ss_pred ---HHHHHHHHHHHhcCC
Q 018158 307 ---MRETQEMMNVCGKYN 321 (360)
Q Consensus 307 ---~~~~~~~~~~l~~~~ 321 (360)
+++++++++++.+|+
T Consensus 159 ~~~~~~~~~li~~~~~GK 176 (176)
T d2jhfa2 159 FKSKDSVPKLVADFMAKK 176 (176)
T ss_dssp CCHHHHHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHHCcC
Confidence 678889999888875
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.87 E-value=1.8e-22 Score=164.47 Aligned_cols=157 Identities=20% Similarity=0.268 Sum_probs=129.3
Q ss_pred CCccccccccchhhhhhchhhc---cCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC
Q 018158 155 IAMDAAAPLLCAGITVFCPMKD---NNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA 230 (360)
Q Consensus 155 ~~~~~aa~l~~~~~ta~~~l~~---~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~ 230 (360)
+|+.+|++++++++|||++++. .+... ++++|||+|+ |++|++++|+||.+|++|+++++++++.+.+++ +|+
T Consensus 1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~--~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~-lGa 77 (177)
T d1o89a2 1 LDARKAMIIGTAGFTAMLCVMALEDAGVRP--QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKS-LGA 77 (177)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCG--GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-HTE
T ss_pred CCHHHHHHcccHHHHHHHHHHHHHHhCCCC--CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHh-hcc
Confidence 5788999999999999987653 34322 5669999999 999999999999999999999999999999998 999
Q ss_pred CeEeeCccHHHHHhc-CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeec--CC
Q 018158 231 DEFILSTNAMQMQAG-KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMT--GG 306 (360)
Q Consensus 231 ~~~v~~~~~~~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~--~~ 306 (360)
++++|+++.+..+.. ....|.++|++|+. .+...+++++++|+++.+|...+ ..+.+...++.+++++.|+.. ..
T Consensus 78 d~vi~~~~~~~~~~l~~~~~~~vvD~Vgg~-~~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~ 156 (177)
T d1o89a2 78 SRVLPRDEFAESRPLEKQVWAGAIDTVGDK-VLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTP 156 (177)
T ss_dssp EEEEEGGGSSSCCSSCCCCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTCSCCCCCSHHHHHHCCEEEECCSSSCC
T ss_pred ccccccccHHHHHHHHhhcCCeeEEEcchH-HHHHHHHHhccccceEeecccCCccccccHHHHHHCCCeEEEEecccCC
Confidence 999998876444333 35579999999887 58999999999999999998764 556778888999999999755 34
Q ss_pred HHHHHHHHH
Q 018158 307 MRETQEMMN 315 (360)
Q Consensus 307 ~~~~~~~~~ 315 (360)
+++..++++
T Consensus 157 ~~~~~~~~~ 165 (177)
T d1o89a2 157 PERRAQAWQ 165 (177)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555444443
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=99.85 E-value=1.5e-21 Score=157.35 Aligned_cols=155 Identities=22% Similarity=0.300 Sum_probs=123.6
Q ss_pred chhhhhhch---hhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHH
Q 018158 165 CAGITVFCP---MKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAM 240 (360)
Q Consensus 165 ~~~~ta~~~---l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 240 (360)
+++.|||.+ |.+.+... ++++|||+|+ |++|++++|+||.+|++|+++++++++.+.+++ +|+++++++++..
T Consensus 3 ~aGlTA~~a~~~L~~~g~~~--~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~-lGad~vi~~~~~~ 79 (167)
T d1tt7a2 3 TAGFTAALSVHRLEQNGLSP--EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ-LGASEVISREDVY 79 (167)
T ss_dssp HHHHHHHHHHHHHHHTTCCG--GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH-HTCSEEEEHHHHC
T ss_pred ChHHHHHHHHHHHHHhcCCC--CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh-hcccceEeccchh
Confidence 456677755 44445443 7889999998 999999999999999999999999999999999 9999999876542
Q ss_pred HH---HhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC-CcccChhhHhccCcEEEEeec--CCHHHHHHHH
Q 018158 241 QM---QAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA-PFELPSFPLIFGKRSVKGSMT--GGMRETQEMM 314 (360)
Q Consensus 241 ~~---~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~ 314 (360)
.. ...++++|+|||++|+. .+..++++++++|+++.+|...+ ..+++...++.+++++.|... ...+....++
T Consensus 80 ~~~~~~~~~~gvd~vid~vgg~-~~~~~~~~l~~~G~iv~~G~~~g~~~~~~~~~l~~k~~~i~G~~~~~~~~~~~~~~~ 158 (167)
T d1tt7a2 80 DGTLKALSKQQWQGAVDPVGGK-QLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVW 158 (167)
T ss_dssp SSCCCSSCCCCEEEEEESCCTH-HHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHH
T ss_pred chhhhcccCCCceEEEecCcHH-HHHHHHHHhccCceEEEeeccCCCcccCCHHHHHHCCcEEEEEecCCCCHHHHHHHH
Confidence 11 11267899999999987 58999999999999999998875 567888999999999999654 3345556666
Q ss_pred HHHhcCCCcc
Q 018158 315 NVCGKYNITC 324 (360)
Q Consensus 315 ~~l~~~~l~~ 324 (360)
+.+. ++++|
T Consensus 159 ~~l~-~~L~P 167 (167)
T d1tt7a2 159 ERMS-SDLKP 167 (167)
T ss_dssp HHTT-TTSCC
T ss_pred HHHH-hcCCC
Confidence 6654 35544
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.84 E-value=3.3e-21 Score=159.14 Aligned_cols=163 Identities=15% Similarity=0.132 Sum_probs=120.8
Q ss_pred CCccccccccchhhhhhchhhccCCCCCCCC--cEEEEEcC-ChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHcCC
Q 018158 155 IAMDAAAPLLCAGITVFCPMKDNNLIDSPAK--KRIGIVGL-GGLGHVAVKFGKAFGHH-VTVISTSPSKEKEAKELLGA 230 (360)
Q Consensus 155 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~--~~vlI~Ga-g~vG~~aiqla~~~G~~-V~~~~~~~~~~~~~~~~~g~ 230 (360)
+|+.+.| ++++++|||+++....+++ +| ++|||+|+ |++|++++|+||.+|++ |+++++++++...+.+.+|+
T Consensus 2 ~~~~~ga-lg~~glTA~~~l~~~~~~~--~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~ga 78 (187)
T d1vj1a2 2 LSYFLGA-IGMPGLTSLIGVQEKGHIS--AGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGF 78 (187)
T ss_dssp GGGGGTT-TSHHHHHHHHHHHHHSCCC--TTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCC
T ss_pred ccHHHHH-hhcHHHHHHHHHHHHhCCC--CCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccc
Confidence 4555543 7778999999999887766 76 88999998 99999999999999995 66667777776666655999
Q ss_pred CeEeeCccHHHHHh----cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCC---Cc----ccC---hhhHhccC
Q 018158 231 DEFILSTNAMQMQA----GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEA---PF----ELP---SFPLIFGK 296 (360)
Q Consensus 231 ~~~v~~~~~~~~~~----~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~----~~~---~~~~~~~~ 296 (360)
++++|+.+.+..+. ..+++|++||++|+. .++..+++++++|+++.+|..++ .. ... ...+..++
T Consensus 79 d~vi~~~~~~~~~~~~~~~~~GvDvv~D~vGg~-~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~k~ 157 (187)
T d1vj1a2 79 DAAVNYKTGNVAEQLREACPGGVDVYFDNVGGD-ISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERN 157 (187)
T ss_dssp SEEEETTSSCHHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHHTT
T ss_pred eEEeeccchhHHHHHHHHhccCceEEEecCCch-hHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHhcc
Confidence 99999988643322 267899999999976 58999999999999999997542 11 111 12356688
Q ss_pred cEEEEeecCC-----HHHHHHHHHHHhcCC
Q 018158 297 RSVKGSMTGG-----MRETQEMMNVCGKYN 321 (360)
Q Consensus 297 ~~i~~~~~~~-----~~~~~~~~~~l~~~~ 321 (360)
+++.++...+ .+.++++.+++.+|+
T Consensus 158 i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk 187 (187)
T d1vj1a2 158 ITRERFTVLNYKDKFEPGILQLSQWFKEGK 187 (187)
T ss_dssp CEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred eEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence 9988875532 234567777777764
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=99.84 E-value=1.9e-20 Score=155.12 Aligned_cols=160 Identities=18% Similarity=0.138 Sum_probs=128.3
Q ss_pred cccccccchhhhhhchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeC
Q 018158 158 DAAAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILS 236 (360)
Q Consensus 158 ~~aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~ 236 (360)
++.++|+..+.|||++++... +++|++|+|+|+|++|++++|+++.+|+ +|++++++++|++.+++ +|+++++++
T Consensus 2 ~d~~~l~d~~~ta~~a~~~a~---v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~-~Ga~~~~~~ 77 (195)
T d1kola2 2 RDLTCLSDILPTGYHGAVTAG---VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA-QGFEIADLS 77 (195)
T ss_dssp HHHGGGGTHHHHHHHHHHHTT---CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-TTCEEEETT
T ss_pred chHHhcccHHHHHHHHHHHhC---CCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhh-ccccEEEeC
Confidence 456788899999999998754 5699999999999999999999999998 79999999999999999 999999987
Q ss_pred ccHHHHH---h--cCCCcCEEEEcCCCc---------------ccHHHHHHHhccCCEEEEeCCCCCC------------
Q 018158 237 TNAMQMQ---A--GKRTLDFILDTVSAK---------------HSLGPILELLKVNGTLSVVGAPEAP------------ 284 (360)
Q Consensus 237 ~~~~~~~---~--~~~~~d~vid~~g~~---------------~~~~~~~~~l~~~G~~v~~g~~~~~------------ 284 (360)
.+.+... + .+.++|++||++|.+ ..++.++++++++|+++.+|.+...
T Consensus 78 ~~~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~ 157 (195)
T d1kola2 78 LDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIG 157 (195)
T ss_dssp SSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTT
T ss_pred CCcCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcC
Confidence 7653322 2 277899999999843 4689999999999999999976432
Q ss_pred -cccChhhHhccCcEEEEeecCCHHHHHHHHHHHhcCC
Q 018158 285 -FELPSFPLIFGKRSVKGSMTGGMRETQEMMNVCGKYN 321 (360)
Q Consensus 285 -~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~ 321 (360)
++++...++.+++++.+.....++.++++++++.+++
T Consensus 158 ~~~~~~~~~~~k~~~i~~g~~~v~~~~~~Ll~~I~~~k 195 (195)
T d1kola2 158 SLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDR 195 (195)
T ss_dssp CCCCCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTS
T ss_pred ceeeeHHHHHhhcceeccCCCchHHHHHHHHHHHHcCC
Confidence 2344445667888876644444555678888887654
|
| >d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=99.64 E-value=1e-15 Score=119.56 Aligned_cols=134 Identities=9% Similarity=0.040 Sum_probs=96.8
Q ss_pred ccceeEEeccCCC------CCceEEEEeCCCCCCCeEEEEEeeeecccchhhhhccCCCCCCCCCccccccceEEEEecC
Q 018158 9 TQSVVGWAAHDPS------GKITPYIFKRRENGVNDVTIKILYCGICHTDIHHVKNDWGITMYPVVPGHEITGIITKVGS 82 (360)
Q Consensus 9 ~~~~~~~~~~~~~------~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~ 82 (360)
|+++++|.+...+ ..|++++.++|+|++||||||+++.++++...... .......++..+++|+|++ |
T Consensus 1 M~~~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~----~~~~~g~~~~g~~vg~Vv~--S 74 (147)
T d1v3va1 1 MVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIAS----KRLKEGAVMMGQQVARVVE--S 74 (147)
T ss_dssp CCEEEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHG----GGSCTTSBCCCCEEEEEEE--E
T ss_pred CcccEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEcccccccc----cccccCCccccceEEEEEE--e
Confidence 3445555554221 24899999999999999999999999987543222 1333445566789999988 6
Q ss_pred CCCCCCCCCEEEeccCccCCCCChhhhCCCCCCcccccccccccccCCCccccceeeEEEeecceeEECCCCCC-----c
Q 018158 83 NVKNFKVGDRAAVGCLAAACMECEFCKDSQENYCDKIQFTYNGIFWDGSITYGGYSEMLVADYRFVVHVPENIA-----M 157 (360)
Q Consensus 83 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~g~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~-----~ 157 (360)
++++|++||+|.. .++||||.+++.+.+.++|++.. .
T Consensus 75 ~~~~f~~GD~V~g--------------------------------------~~gw~ey~v~~~~~l~kv~~~~~~~~~~~ 116 (147)
T d1v3va1 75 KNSAFPAGSIVLA--------------------------------------QSGWTTHFISDGKGLEKLLTEWPDKKIQY 116 (147)
T ss_dssp SCTTSCTTCEEEE--------------------------------------CCCSBSEEEECSSSCEECCTTCCTTSSCC
T ss_pred CCCcccCCCEEEE--------------------------------------ccCCEeEEEeccceeeEccccccccccch
Confidence 6788999999974 37899999999999999986643 3
Q ss_pred cccccccchhhh-hhchhhccCCCCCCCCcEEEE
Q 018158 158 DAAAPLLCAGIT-VFCPMKDNNLIDSPAKKRIGI 190 (360)
Q Consensus 158 ~~aa~l~~~~~t-a~~~l~~~~~~~~~~~~~vlI 190 (360)
...+++...+.| ||..+... . +.|++||+
T Consensus 117 ~~~~~lG~~Gmtaay~gl~~~--~--k~Getvv~ 146 (147)
T d1v3va1 117 HEHVTKGFENMPAAFIEMLNG--A--NLGKAVVT 146 (147)
T ss_dssp CEEEEECGGGHHHHHHHHHTT--C--CSSEEEEE
T ss_pred hhhHhccccchHHHHHHhhCC--C--CCCCEEEe
Confidence 344566667776 45455433 2 37999886
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.46 E-value=1.8e-14 Score=98.46 Aligned_cols=73 Identities=27% Similarity=0.362 Sum_probs=64.9
Q ss_pred CCccccccccchhhhhhchhhc---cCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC
Q 018158 155 IAMDAAAPLLCAGITVFCPMKD---NNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA 230 (360)
Q Consensus 155 ~~~~~aa~l~~~~~ta~~~l~~---~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~ 230 (360)
+|+++|+.+++++.|||.++.. .... ++++++||+|+ |++|.+++|++|.+|++|+++.+++++.+++++ +|+
T Consensus 1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~--~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~-lGA 77 (77)
T d1o8ca2 1 LDARKAMIIGTAGFTAMLCVMALEDAGVR--PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKS-LGA 77 (77)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCC--GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-HTE
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHHhhhhc--cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHHH-CCC
Confidence 5789999999999999988753 3333 48999999999 999999999999999999999999999999998 874
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=98.53 E-value=3.8e-07 Score=70.77 Aligned_cols=99 Identities=16% Similarity=0.300 Sum_probs=77.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCC---c-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSA---K- 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~---~- 259 (360)
+.-+|+|+|+|.+|+.+++.|+.+|++|++++.+.++++++++.++........+...+.+.-...|+||.++=- .
T Consensus 31 ~pa~V~ViGaGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI~aalipG~~a 110 (168)
T d1pjca1 31 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRA 110 (168)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSC
T ss_pred CCcEEEEECCChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhccCcEEEEeeecCCccc
Confidence 356799999999999999999999999999999999999999966633222233333444445679999998732 1
Q ss_pred --ccHHHHHHHhccCCEEEEeCCCC
Q 018158 260 --HSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 260 --~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
..-+++++.|++|+.++++..-.
T Consensus 111 P~lIt~~mv~~Mk~GSVIVDvaidq 135 (168)
T d1pjca1 111 PILVPASLVEQMRTGSVIVDVAVDQ 135 (168)
T ss_dssp CCCBCHHHHTTSCTTCEEEETTCTT
T ss_pred CeeecHHHHhhcCCCcEEEEeecCC
Confidence 12478999999999999997644
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=98.34 E-value=1.3e-06 Score=68.72 Aligned_cols=98 Identities=14% Similarity=0.182 Sum_probs=73.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeC-cc----------------------HH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILS-TN----------------------AM 240 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~-~~----------------------~~ 240 (360)
+.-+|+|+|+|.+|+.|+..|+.+|++|++++.+.++++++++ +++..+... .. .+
T Consensus 28 ~pa~VvViGaGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~-l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~ 106 (183)
T d1l7da1 28 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVES-LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 106 (183)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH-TTCEECCC-----------------------CCHHH
T ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH-hhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence 3457999999999999999999999999999999999999999 775433110 00 01
Q ss_pred HHHhcCCCcCEEEEcCC---Cc---ccHHHHHHHhccCCEEEEeCCCC
Q 018158 241 QMQAGKRTLDFILDTVS---AK---HSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 241 ~~~~~~~~~d~vid~~g---~~---~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.+...-...|+||-++= .. ..-+++++.|++|+.++++..-.
T Consensus 107 ~l~~~l~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaidq 154 (183)
T d1l7da1 107 AVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEA 154 (183)
T ss_dssp HHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGG
T ss_pred HHHHHHHhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeecC
Confidence 11222457999998773 22 12478999999999999997543
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.16 E-value=5.6e-06 Score=66.64 Aligned_cols=75 Identities=11% Similarity=0.118 Sum_probs=61.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC-----CCeEeeCccHHHHHhcCCCcCEEEEcCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG-----ADEFILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g-----~~~~v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
.|++++|+|+ |++|..+++.+...|++|++++|+.++.+.+.+.+. .....|..+.+.....-.++|++|++.|
T Consensus 22 ~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin~Ag 101 (191)
T d1luaa1 22 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGA 101 (191)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeeecCc
Confidence 7999999999 999999999999999999999999998877766543 2334566666666666778999999987
Q ss_pred C
Q 018158 258 A 258 (360)
Q Consensus 258 ~ 258 (360)
.
T Consensus 102 ~ 102 (191)
T d1luaa1 102 I 102 (191)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.07 E-value=1.4e-05 Score=67.23 Aligned_cols=99 Identities=14% Similarity=0.149 Sum_probs=74.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe---eCccHHHHHh-------cCCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI---LSTNAMQMQA-------GKRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v---~~~~~~~~~~-------~~~~~d~v 252 (360)
+|+++||+|+ +++|.++++.+...|++|+++++++++++.+.+.++..... |-.+.+.... .-.++|++
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil 84 (253)
T d1hxha_ 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL 84 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence 6899999999 99999999999999999999999999988888878855443 3333322211 14679999
Q ss_pred EEcCCCc-------------------------ccHHHHHHHhc-cCCEEEEeCCCC
Q 018158 253 LDTVSAK-------------------------HSLGPILELLK-VNGTLSVVGAPE 282 (360)
Q Consensus 253 id~~g~~-------------------------~~~~~~~~~l~-~~G~~v~~g~~~ 282 (360)
+++.|.. ...+.++..|+ .+|+|+.++...
T Consensus 85 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~ 140 (253)
T d1hxha_ 85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVS 140 (253)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchh
Confidence 9999842 12356666675 579999998654
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=98.07 E-value=1.3e-05 Score=67.02 Aligned_cols=99 Identities=16% Similarity=0.255 Sum_probs=73.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe---EeeCccHHHHHh-------cCCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE---FILSTNAMQMQA-------GKRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~-------~~~~~d~v 252 (360)
+|+++||+|+ +++|.+.++.+...|++|+++++++++++.+.+.++... ..|-.+.+.... .-.++|++
T Consensus 3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil 82 (243)
T d1q7ba_ 3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL 82 (243)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence 6899999999 999999999999999999999999999888887776432 234444333222 14689999
Q ss_pred EEcCCCc-------------------------ccHHHHHHHhc--cCCEEEEeCCCC
Q 018158 253 LDTVSAK-------------------------HSLGPILELLK--VNGTLSVVGAPE 282 (360)
Q Consensus 253 id~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g~~~ 282 (360)
++++|.. ...+.++..|+ .+|+++.++...
T Consensus 83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~ 139 (243)
T d1q7ba_ 83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVV 139 (243)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHH
T ss_pred hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchh
Confidence 9998733 12455666664 468999997643
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.02 E-value=3.6e-05 Score=64.27 Aligned_cols=75 Identities=16% Similarity=0.190 Sum_probs=59.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCe--EeeCccHHHHHhc---CCCcCEEEEcCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADE--FILSTNAMQMQAG---KRTLDFILDTVS 257 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~--~v~~~~~~~~~~~---~~~~d~vid~~g 257 (360)
.|+++||+|+ +++|.+.++.+...|++|+++++++++++.+.++++... ..|-.+.+..+.. -+++|+++++.|
T Consensus 6 ~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnAg 85 (244)
T d1pr9a_ 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA 85 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEeccc
Confidence 7999999999 999999999999999999999999999988877666322 2355444433332 457999999988
Q ss_pred C
Q 018158 258 A 258 (360)
Q Consensus 258 ~ 258 (360)
.
T Consensus 86 ~ 86 (244)
T d1pr9a_ 86 V 86 (244)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=98.00 E-value=3e-05 Score=64.89 Aligned_cols=98 Identities=15% Similarity=0.189 Sum_probs=72.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhc-------CCCcCEEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAG-------KRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~-------~~~~d~vid 254 (360)
.|+++||+|+ +++|.+.++.+...|++|++++++++..+.+++ .+...+ .|-.+.+..+.. -.++|++++
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVn 82 (248)
T d2d1ya1 4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEA-IGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVN 82 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHH-HTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence 7999999999 999999999999999999999999888777766 675432 344444332221 467999999
Q ss_pred cCCCc-------------------------ccHHHHHHHhcc--CCEEEEeCCCC
Q 018158 255 TVSAK-------------------------HSLGPILELLKV--NGTLSVVGAPE 282 (360)
Q Consensus 255 ~~g~~-------------------------~~~~~~~~~l~~--~G~~v~~g~~~ 282 (360)
++|.. ...+.++..|++ +|+|+.++...
T Consensus 83 nAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~ 137 (248)
T d2d1ya1 83 NAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQ 137 (248)
T ss_dssp CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred eCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccc
Confidence 98832 123566666754 58999998654
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=97.99 E-value=2.5e-05 Score=65.63 Aligned_cols=99 Identities=17% Similarity=0.190 Sum_probs=72.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~d~v 252 (360)
+|+++||+|+ +++|.+.++.+...|++|+++++++++++.+.+.+|.... .|-.+.+..+.. -.++|++
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil 83 (254)
T d1hdca_ 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL 83 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence 6899999999 9999999999999999999999999998888776774322 244443333221 3579999
Q ss_pred EEcCCCc-------------------------ccHHHHHHHhc--cCCEEEEeCCCC
Q 018158 253 LDTVSAK-------------------------HSLGPILELLK--VNGTLSVVGAPE 282 (360)
Q Consensus 253 id~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g~~~ 282 (360)
++++|.. ...+.++..|+ .+|+++.++...
T Consensus 84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~ 140 (254)
T d1hdca_ 84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAA 140 (254)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccch
Confidence 9999832 11344555544 368999998654
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.96 E-value=3.3e-05 Score=64.50 Aligned_cols=100 Identities=17% Similarity=0.147 Sum_probs=72.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHh-------cCCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQA-------GKRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~-------~~~~~d~v 252 (360)
.|+++||+|+ +++|.++++.+...|++|+++++++++++.+.++++.... .|-.+.+..+. ...++|++
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idil 84 (244)
T d1nffa_ 5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL 84 (244)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEE
Confidence 6899999999 9999999999999999999999999999888877764322 24434333222 14579999
Q ss_pred EEcCCCc-------------------------ccHHHHHHHhc--cCCEEEEeCCCCC
Q 018158 253 LDTVSAK-------------------------HSLGPILELLK--VNGTLSVVGAPEA 283 (360)
Q Consensus 253 id~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g~~~~ 283 (360)
++++|.. ...+.++..|+ .+|+++.++...+
T Consensus 85 innAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~ 142 (244)
T d1nffa_ 85 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEG 142 (244)
T ss_dssp EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred EECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccc
Confidence 9999843 11234555554 3589999987553
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.95 E-value=3.4e-05 Score=64.63 Aligned_cols=99 Identities=17% Similarity=0.156 Sum_probs=72.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE--eeCccHHHHHhc-------CCCcCEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF--ILSTNAMQMQAG-------KRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~--v~~~~~~~~~~~-------~~~~d~vi 253 (360)
.|+++||+|+ +++|.+.++.+-..|++|+++++++++++.+.+.++.... .|-.+.+..+.. -.++|+++
T Consensus 5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilV 84 (250)
T d1ydea1 5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV 84 (250)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 6999999999 9999999999999999999999999999988886653222 244444333221 35799999
Q ss_pred EcCCCc--------------------------ccHHHHHHHhcc-CCEEEEeCCCC
Q 018158 254 DTVSAK--------------------------HSLGPILELLKV-NGTLSVVGAPE 282 (360)
Q Consensus 254 d~~g~~--------------------------~~~~~~~~~l~~-~G~~v~~g~~~ 282 (360)
+++|.. ...+.++..|++ +|+++.++...
T Consensus 85 nnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~ 140 (250)
T d1ydea1 85 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLV 140 (250)
T ss_dssp ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHH
T ss_pred ecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccccc
Confidence 998832 113455556654 58999997643
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=97.93 E-value=4.7e-05 Score=64.05 Aligned_cols=75 Identities=13% Similarity=0.190 Sum_probs=59.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~d~v 252 (360)
+|+++||+|+ +++|.++++.+...|++|++++++.++++.+.+++|.... .|-.+.+..... -.++|++
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil 83 (256)
T d1k2wa_ 4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL 83 (256)
T ss_dssp TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence 6899999999 9999999999999999999999999999888887886433 244444333221 3589999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
+++.|.
T Consensus 84 VnnAg~ 89 (256)
T d1k2wa_ 84 VNNAAL 89 (256)
T ss_dssp EECCCC
T ss_pred Eeeccc
Confidence 999983
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=97.91 E-value=1.8e-05 Score=62.09 Aligned_cols=75 Identities=15% Similarity=0.201 Sum_probs=58.5
Q ss_pred chhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcC
Q 018158 172 CPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLD 250 (360)
Q Consensus 172 ~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d 250 (360)
.+++... ..++++|+|+|+|+.+.+++..++..|+ +|+++.|+.++.+.+++.++...+ +... ...+|
T Consensus 7 ~~l~~~~---~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~-~~~~-------~~~~D 75 (167)
T d1npya1 7 KLIEKYH---LNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYI-NSLE-------NQQAD 75 (167)
T ss_dssp HHHHHTT---CCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEE-SCCT-------TCCCS
T ss_pred HHHHHcC---CCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhh-hccc-------ccchh
Confidence 3455444 4478999999999999999999999998 699999999998888886775433 2111 24689
Q ss_pred EEEEcCC
Q 018158 251 FILDTVS 257 (360)
Q Consensus 251 ~vid~~g 257 (360)
++++|++
T Consensus 76 liINaTp 82 (167)
T d1npya1 76 ILVNVTS 82 (167)
T ss_dssp EEEECSS
T ss_pred hheeccc
Confidence 9999986
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.86 E-value=0.0001 Score=61.75 Aligned_cols=99 Identities=13% Similarity=0.123 Sum_probs=70.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC----C-Ce---EeeCccHHHHHhc-------CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG----A-DE---FILSTNAMQMQAG-------KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g----~-~~---~v~~~~~~~~~~~-------~~ 247 (360)
.|+++||+|+ +++|.++++.+...|++|++++++.++++.+.+.+. . .. ..|-.+.+..+.. -.
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 81 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 81 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 5899999999 999999999999999999999999998877766542 1 11 1244444333221 35
Q ss_pred CcCEEEEcCCCcc-----------------cHHHHHHHhcc-----CCEEEEeCCCC
Q 018158 248 TLDFILDTVSAKH-----------------SLGPILELLKV-----NGTLSVVGAPE 282 (360)
Q Consensus 248 ~~d~vid~~g~~~-----------------~~~~~~~~l~~-----~G~~v~~g~~~ 282 (360)
++|++++++|... ....++..|++ +|+|+.++...
T Consensus 82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~ 138 (254)
T d2gdza1 82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLA 138 (254)
T ss_dssp CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGG
T ss_pred CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHh
Confidence 8999999998431 13445555543 48899997654
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=97.85 E-value=2.1e-05 Score=64.22 Aligned_cols=96 Identities=21% Similarity=0.182 Sum_probs=69.3
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHc---CCCeEe-eCccHHHHHhcCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKELL---GADEFI-LSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~~---g~~~~v-~~~~~~~~~~~~~~~d~vid~ 255 (360)
+++|++||-+|+|. |..++.+++..|. +|+.++.+++..+.+++++ +.+.+. ...+..........||+|+.+
T Consensus 73 l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~~~~~~fD~I~~~ 151 (213)
T d1dl5a1 73 LDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVT 151 (213)
T ss_dssp CCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEEC
T ss_pred ccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHccccccchhhhhhh
Confidence 55999999999975 8888889998764 7999999999888777753 333222 111221111124579999987
Q ss_pred CCCcccHHHHHHHhccCCEEEEe
Q 018158 256 VSAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 256 ~g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
.+.......+++.|++||+++..
T Consensus 152 ~~~~~~p~~l~~~LkpGG~lv~p 174 (213)
T d1dl5a1 152 VGVDEVPETWFTQLKEGGRVIVP 174 (213)
T ss_dssp SBBSCCCHHHHHHEEEEEEEEEE
T ss_pred ccHHHhHHHHHHhcCCCcEEEEE
Confidence 77655567889999999999873
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.85 E-value=0.00016 Score=60.20 Aligned_cols=102 Identities=12% Similarity=0.176 Sum_probs=72.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~-------~~~~~ 249 (360)
.|+++||+|+ +++|...+..+...|++|++++++.++++.+.+. .|.... .|..+.+.... .-..+
T Consensus 6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i 85 (244)
T d1yb1a_ 6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV 85 (244)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 6899999999 9999998888888899999999999988766554 343322 34444433322 25579
Q ss_pred CEEEEcCCCc-------------------------ccHHHHHHHhcc--CCEEEEeCCCCCCc
Q 018158 250 DFILDTVSAK-------------------------HSLGPILELLKV--NGTLSVVGAPEAPF 285 (360)
Q Consensus 250 d~vid~~g~~-------------------------~~~~~~~~~l~~--~G~~v~~g~~~~~~ 285 (360)
|++++++|.. ...+.++..|+. .|+++.++...+..
T Consensus 86 dilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~ 148 (244)
T d1yb1a_ 86 SILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV 148 (244)
T ss_dssp SEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC
T ss_pred ceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcC
Confidence 9999999843 123455666654 47899998776443
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.84 E-value=3e-05 Score=60.90 Aligned_cols=84 Identities=18% Similarity=0.235 Sum_probs=59.1
Q ss_pred chhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCE
Q 018158 172 CPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDF 251 (360)
Q Consensus 172 ~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~ 251 (360)
++|+..+... +|++|+|+|+|+.+.+++..+..+|++|+++.|+.++.+.+.+.+.....+...+.+. .....+|+
T Consensus 7 ~~l~~~~~~~--~~k~vlIlGaGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~--~~~~~~dl 82 (170)
T d1nyta1 7 SDLERLSFIR--PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDE--LEGHEFDL 82 (170)
T ss_dssp HHHHHHTCCC--TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGG--GTTCCCSE
T ss_pred HHHHHcCCCC--CCCEEEEECCcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccccccc--ccccccce
Confidence 3455444322 7899999999999999999999999999999999999888877554211111111111 12457999
Q ss_pred EEEcCCCc
Q 018158 252 ILDTVSAK 259 (360)
Q Consensus 252 vid~~g~~ 259 (360)
+|+|+...
T Consensus 83 iIN~Tp~G 90 (170)
T d1nyta1 83 IINATSSG 90 (170)
T ss_dssp EEECCSCG
T ss_pred eecccccC
Confidence 99999643
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=97.83 E-value=0.00011 Score=62.06 Aligned_cols=99 Identities=15% Similarity=0.213 Sum_probs=71.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC---e--EeeCccHHHHHhc-------CCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD---E--FILSTNAMQMQAG-------KRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~---~--~v~~~~~~~~~~~-------~~~~d 250 (360)
.|+++||+|+ +++|.+.++.+...|++|+++++++++++.+.+.++.. . ..|-.+.+..+.. -.++|
T Consensus 5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 84 (268)
T d2bgka1 5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD 84 (268)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcc
Confidence 6899999999 99999999999999999999999999988887766531 1 1244444333221 45899
Q ss_pred EEEEcCCCc---------------------------ccHHHHHHHhc--cCCEEEEeCCCC
Q 018158 251 FILDTVSAK---------------------------HSLGPILELLK--VNGTLSVVGAPE 282 (360)
Q Consensus 251 ~vid~~g~~---------------------------~~~~~~~~~l~--~~G~~v~~g~~~ 282 (360)
++++++|.. ...+.++..|. .+|+++.++...
T Consensus 85 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~ 145 (268)
T d2bgka1 85 IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASIS 145 (268)
T ss_dssp EEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGG
T ss_pred eeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccc
Confidence 999998731 11355666664 357888886543
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=97.83 E-value=7.9e-05 Score=62.71 Aligned_cols=99 Identities=14% Similarity=0.083 Sum_probs=69.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHh--------cCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQA--------GKRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~--------~~~~ 248 (360)
.|+++||+|+ +++|.++++.+...|++|+++++++++++.+.+++ |.... .|-.+.+.... .+.+
T Consensus 7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~ 86 (259)
T d2ae2a_ 7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK 86 (259)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence 6899999999 99999999999999999999999999887766543 33222 23333322211 1446
Q ss_pred cCEEEEcCCCc-------------------------ccHHHHHHHhc--cCCEEEEeCCCC
Q 018158 249 LDFILDTVSAK-------------------------HSLGPILELLK--VNGTLSVVGAPE 282 (360)
Q Consensus 249 ~d~vid~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g~~~ 282 (360)
+|+++++.|.. ...+.++..|+ .+|+++.++...
T Consensus 87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~ 147 (259)
T d2ae2a_ 87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVS 147 (259)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGG
T ss_pred ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccc
Confidence 99999999832 11244555554 468999998654
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.83 E-value=0.00015 Score=60.67 Aligned_cols=98 Identities=18% Similarity=0.173 Sum_probs=70.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHH----HcCCCeE---eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKE----LLGADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~----~~g~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
+|+++||+|+ +++|.+.++.+...|++|++++++.++++.+.+ ++|.+.. .|-.+.+..... -.+
T Consensus 4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 83 (251)
T d1vl8a_ 4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK 83 (251)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5899999999 999999999999999999999999887655433 2464322 244444332221 357
Q ss_pred cCEEEEcCCCc-------------------------ccHHHHHHHhcc--CCEEEEeCCC
Q 018158 249 LDFILDTVSAK-------------------------HSLGPILELLKV--NGTLSVVGAP 281 (360)
Q Consensus 249 ~d~vid~~g~~-------------------------~~~~~~~~~l~~--~G~~v~~g~~ 281 (360)
+|++++++|.. ...+.++..|+. +|+++.++..
T Consensus 84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~ 143 (251)
T d1vl8a_ 84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSL 143 (251)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCG
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccc
Confidence 99999999842 124566777753 5799999764
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=97.82 E-value=9.1e-05 Score=62.35 Aligned_cols=99 Identities=13% Similarity=0.178 Sum_probs=69.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.|+++||+|+ +++|.++++.+-..|++|+++++++++++.+.+.+ |.+.. .|-.+.+..+.. -.++
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (260)
T d1zema1 4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI 83 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 6999999999 99999999999999999999999999887776543 43322 243343322221 4579
Q ss_pred CEEEEcCCCc--------------------------ccHHHHHHHh--ccCCEEEEeCCCC
Q 018158 250 DFILDTVSAK--------------------------HSLGPILELL--KVNGTLSVVGAPE 282 (360)
Q Consensus 250 d~vid~~g~~--------------------------~~~~~~~~~l--~~~G~~v~~g~~~ 282 (360)
|+++++.|.. ...+.++..| +.+|+++.++...
T Consensus 84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~ 144 (260)
T d1zema1 84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMA 144 (260)
T ss_dssp CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHH
T ss_pred CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechh
Confidence 9999998732 1134455555 3578999997643
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.81 E-value=5.6e-05 Score=63.64 Aligned_cols=99 Identities=18% Similarity=0.191 Sum_probs=68.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC---eEeeCccHHHHHh----c----CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD---EFILSTNAMQMQA----G----KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~----~----~~~ 248 (360)
+|+++||+|+ +++|.++++.+...|++|+++++++++++.+.+++ +.. ...|-.+.+.... . +..
T Consensus 7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~ 86 (259)
T d1xq1a_ 7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK 86 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence 6899999999 99999999999999999999999999887776543 222 1224444332211 1 356
Q ss_pred cCEEEEcCCCc-------------------------ccHHHHHHHhc--cCCEEEEeCCCC
Q 018158 249 LDFILDTVSAK-------------------------HSLGPILELLK--VNGTLSVVGAPE 282 (360)
Q Consensus 249 ~d~vid~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g~~~ 282 (360)
+|+++++.|.. ...+.++..|+ .+|+++.++...
T Consensus 87 idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~ 147 (259)
T d1xq1a_ 87 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIA 147 (259)
T ss_dssp CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---
T ss_pred cccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccc
Confidence 99999999842 11345555564 458999997654
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=97.81 E-value=7.1e-05 Score=63.62 Aligned_cols=74 Identities=19% Similarity=0.163 Sum_probs=57.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE---eeCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF---ILSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~d~v 252 (360)
.|+++||+|+ +++|.++++.+...|++|+++++++++++.+.+.+|.... .|-.+.+..... -.++|++
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil 83 (276)
T d1bdba_ 4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL 83 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence 6899999999 9999999999999999999999999998888776774322 244443322221 4679999
Q ss_pred EEcCC
Q 018158 253 LDTVS 257 (360)
Q Consensus 253 id~~g 257 (360)
++++|
T Consensus 84 vnnAG 88 (276)
T d1bdba_ 84 IPNAG 88 (276)
T ss_dssp ECCCC
T ss_pred ccccc
Confidence 99987
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.81 E-value=0.00022 Score=55.04 Aligned_cols=95 Identities=19% Similarity=0.235 Sum_probs=67.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
.+++++|+|+|.+|.+.++.+...|+ +++++.|+.++...+.+++|.. .+...+. ...-..+|+||.|++....+
T Consensus 23 ~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~~~~---~~~l~~~Divi~atss~~~i 98 (159)
T d1gpja2 23 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFDEL---VDHLARSDVVVSATAAPHPV 98 (159)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGGGH---HHHHHTCSEEEECCSSSSCC
T ss_pred ccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccchhH---HHHhccCCEEEEecCCCCcc
Confidence 68899999999999999999999999 6999999988887777768853 4444433 22335799999999865321
Q ss_pred ---HHHHHHhc---cCC--EEEEeCCCC
Q 018158 263 ---GPILELLK---VNG--TLSVVGAPE 282 (360)
Q Consensus 263 ---~~~~~~l~---~~G--~~v~~g~~~ 282 (360)
..+-..++ .+. .+++++.+.
T Consensus 99 i~~~~i~~~~~~r~~~~~~~iiDlavPr 126 (159)
T d1gpja2 99 IHVDDVREALRKRDRRSPILIIDIANPR 126 (159)
T ss_dssp BCHHHHHHHHHHCSSCCCEEEEECCSSC
T ss_pred ccHhhhHHHHHhcccCCCeEEEeecCCC
Confidence 22223332 222 567777554
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=97.77 E-value=0.00011 Score=61.56 Aligned_cols=99 Identities=13% Similarity=0.089 Sum_probs=70.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC-CeE----eeCccHHHHHh-------cCCCcC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA-DEF----ILSTNAMQMQA-------GKRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~-~~~----v~~~~~~~~~~-------~~~~~d 250 (360)
.|+++||+|+ +++|.+.++.+...|++|++++++.++++.+.+.++. ..+ .|-.+.+.... .-.++|
T Consensus 5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD 84 (251)
T d1zk4a1 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS 84 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCce
Confidence 6899999999 9999999999999999999999999998888776652 111 24444332222 146899
Q ss_pred EEEEcCCCc-------------------------ccHHHHHHHhcc---CCEEEEeCCCC
Q 018158 251 FILDTVSAK-------------------------HSLGPILELLKV---NGTLSVVGAPE 282 (360)
Q Consensus 251 ~vid~~g~~-------------------------~~~~~~~~~l~~---~G~~v~~g~~~ 282 (360)
++++++|.. ...+.++..|++ +|+++.++...
T Consensus 85 iLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~ 144 (251)
T d1zk4a1 85 TLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIE 144 (251)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGG
T ss_pred EEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccc
Confidence 999999842 123555666653 35888887644
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=97.75 E-value=6.1e-05 Score=62.74 Aligned_cols=75 Identities=19% Similarity=0.267 Sum_probs=59.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhc-------CCCcCEEEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAG-------KRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~-------~~~~d~vid 254 (360)
.|+++||+|+ +++|.+.++.+...|++|+++++++++++.+.+.++...+ .|-.+.+..... -.++|++++
T Consensus 4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn 83 (242)
T d1ulsa_ 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH 83 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEE
Confidence 5899999999 9999999999999999999999999999988886775433 344444333221 357999999
Q ss_pred cCCC
Q 018158 255 TVSA 258 (360)
Q Consensus 255 ~~g~ 258 (360)
++|.
T Consensus 84 nAG~ 87 (242)
T d1ulsa_ 84 YAGI 87 (242)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 9884
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=97.74 E-value=0.00013 Score=60.66 Aligned_cols=99 Identities=18% Similarity=0.181 Sum_probs=73.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe---eCccHHHHHhc-------CCCcCEE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI---LSTNAMQMQAG-------KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v---~~~~~~~~~~~-------~~~~d~v 252 (360)
.|+++||+|+ +++|.+.++-+...|++|++++++.++++.+.++++.+... |-.+.+..... -.++|++
T Consensus 4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL 83 (241)
T d2a4ka1 4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV 83 (241)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence 6999999999 99999999999999999999999999988888878854332 33343333221 3679999
Q ss_pred EEcCCCc-------------------------ccHHHHHHHhccCCEEEEeCCCC
Q 018158 253 LDTVSAK-------------------------HSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 253 id~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
++++|.. ...+.+...++.++.++.++...
T Consensus 84 innAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a 138 (241)
T d2a4ka1 84 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVA 138 (241)
T ss_dssp EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCT
T ss_pred ccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccc
Confidence 9988732 11345566777778877776544
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.74 E-value=0.00012 Score=61.40 Aligned_cols=75 Identities=13% Similarity=0.155 Sum_probs=56.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CC-CeE----eeCccHHHHHh-------cCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GA-DEF----ILSTNAMQMQA-------GKR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~-~~~----v~~~~~~~~~~-------~~~ 247 (360)
+|+++||+|+ +++|.+.++.+...|++|++++++.++++.+.+++ +. ..+ .|-.+.+.... .-+
T Consensus 9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g 88 (257)
T d1xg5a_ 9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 88 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 6899999999 99999999999999999999999999887765543 32 222 24444433322 146
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|++++++|.
T Consensus 89 ~iD~lVnnAg~ 99 (257)
T d1xg5a_ 89 GVDICINNAGL 99 (257)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEecccc
Confidence 79999999984
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.73 E-value=0.00014 Score=60.87 Aligned_cols=99 Identities=14% Similarity=0.162 Sum_probs=69.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHh-------cCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQA-------GKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~-------~~~~~ 249 (360)
.++++||+|+ +++|.+.++.+...|++|+++++++++++.+.+. .|.+.. .|-.+.+.... .-+++
T Consensus 9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i 88 (251)
T d2c07a1 9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV 88 (251)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence 5889999999 9999999999999999999999999888776654 343322 24444333222 14689
Q ss_pred CEEEEcCCCc-------------------------ccHHHHHHHhc--cCCEEEEeCCCC
Q 018158 250 DFILDTVSAK-------------------------HSLGPILELLK--VNGTLSVVGAPE 282 (360)
Q Consensus 250 d~vid~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g~~~ 282 (360)
|+++++.|.. ...+.++..|+ .+|+|+.++...
T Consensus 89 Dilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~ 148 (251)
T d2c07a1 89 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIV 148 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTH
T ss_pred eeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHH
Confidence 9999988842 11344555553 468999998654
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.73 E-value=0.0002 Score=53.42 Aligned_cols=74 Identities=19% Similarity=0.196 Sum_probs=60.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe-eCccHHHHHhcC-CCcCEEEEcCCCcc
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI-LSTNAMQMQAGK-RTLDFILDTVSAKH 260 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~~-~~~d~vid~~g~~~ 260 (360)
+|+|+|+|.+|..+++.+...|.+|++++.++++.+.+.++++...+. |..+.+.+...+ ..+|+++-+++...
T Consensus 2 ~IvI~G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d~ 77 (132)
T d1lssa_ 2 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEE 77 (132)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCcHH
Confidence 589999999999999999999999999999999999888767654332 455555565553 78999999888764
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=97.73 E-value=0.00024 Score=59.62 Aligned_cols=99 Identities=16% Similarity=0.214 Sum_probs=69.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---C-CCeE----eeCccHHHHHhc-------CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---G-ADEF----ILSTNAMQMQAG-------KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g-~~~~----v~~~~~~~~~~~-------~~ 247 (360)
.|+++||+|+ +++|.++++.+-..|++|++++++.++++.+.+.+ + ...+ .|-.+.+..... -.
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 82 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 82 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence 6899999999 99999999999999999999999998876654432 2 1122 244444333221 46
Q ss_pred CcCEEEEcCCCc--------------------------ccHHHHHHHhc--cCCEEEEeCCCC
Q 018158 248 TLDFILDTVSAK--------------------------HSLGPILELLK--VNGTLSVVGAPE 282 (360)
Q Consensus 248 ~~d~vid~~g~~--------------------------~~~~~~~~~l~--~~G~~v~~g~~~ 282 (360)
++|++++++|.. ...+.++..|+ .+|+|+.++...
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~ 145 (258)
T d1iy8a_ 83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVG 145 (258)
T ss_dssp CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGG
T ss_pred CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHh
Confidence 799999998731 11344555554 568999998654
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.72 E-value=8.5e-05 Score=61.82 Aligned_cols=75 Identities=15% Similarity=0.116 Sum_probs=58.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC--eEeeCccHHHHHhc---CCCcCEEEEcCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD--EFILSTNAMQMQAG---KRTLDFILDTVS 257 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~~~~~~---~~~~d~vid~~g 257 (360)
.|+++||+|+ +++|.++++.+...|++|+++++++++++.+.+.++.. ...|-.+.+..+.. -+++|++++++|
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg 83 (242)
T d1cyda_ 4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA 83 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCc
Confidence 6899999999 99999999999999999999999999988887766532 22344444333332 467999999988
Q ss_pred C
Q 018158 258 A 258 (360)
Q Consensus 258 ~ 258 (360)
.
T Consensus 84 ~ 84 (242)
T d1cyda_ 84 L 84 (242)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.70 E-value=0.00011 Score=57.84 Aligned_cols=97 Identities=12% Similarity=0.097 Sum_probs=70.6
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe--eCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI--LSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v--~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
+++|+|+|+|.+|..+++.+...|.+|++++|+.++.+.+.++++..... +..........-...|.++.+.......
T Consensus 2 ~K~IliiGaG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~ 81 (182)
T d1e5qa1 2 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFHA 81 (182)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSCGGGHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeeccchhhh
Confidence 58899999999999999999999999999999999999988856533222 1122222233356788999888766555
Q ss_pred HHHHHHhccCCEEEEeCCC
Q 018158 263 GPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~~ 281 (360)
.....+++.+..++.....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~ 100 (182)
T d1e5qa1 82 TVIKSAIRQKKHVVTTSYV 100 (182)
T ss_dssp HHHHHHHHHTCEEECSSCC
T ss_pred HHHHHHHhhccceeecccC
Confidence 5666666777777766543
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.67 E-value=0.0001 Score=61.41 Aligned_cols=75 Identities=20% Similarity=0.198 Sum_probs=56.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-eEeeCccHHHH---HhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-EFILSTNAMQM---QAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~---~~~~~~~d~vid~~g~ 258 (360)
.|+++||+|+ +++|.+.++.+...|++|+++++++++++.+.+..+.. ...|....+.. .....++|+++++.|.
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag~ 84 (245)
T d2ag5a1 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGF 84 (245)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEecccc
Confidence 6899999999 99999999999999999999999999888877744432 22233222222 2225689999999884
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=97.65 E-value=6.8e-05 Score=61.00 Aligned_cols=96 Identities=24% Similarity=0.236 Sum_probs=69.0
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeEee-CccHHHHHhcCCCcCEEEEcCC
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEFIL-STNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~v~-~~~~~~~~~~~~~~d~vid~~g 257 (360)
+++|++||.+|+|. |..++.+++..|.+|+.++.+++-.+.+++. +|.+.+.. ..+...-......||.|+-+.+
T Consensus 76 l~~g~~VLeIGsGs-GY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~~~~~pfD~Iiv~~a 154 (215)
T d1jg1a_ 76 LKPGMNILEVGTGS-GWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYDVIIVTAG 154 (215)
T ss_dssp CCTTCCEEEECCTT-SHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSB
T ss_pred cCccceEEEecCCC-ChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCCcccCcceeEEeecc
Confidence 55999999999864 8888888888898899999998755554433 57544432 2222111122567999998777
Q ss_pred CcccHHHHHHHhccCCEEEEe
Q 018158 258 AKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 258 ~~~~~~~~~~~l~~~G~~v~~ 278 (360)
........++.|++||+++..
T Consensus 155 ~~~ip~~l~~qL~~gGrLv~p 175 (215)
T d1jg1a_ 155 APKIPEPLIEQLKIGGKLIIP 175 (215)
T ss_dssp BSSCCHHHHHTEEEEEEEEEE
T ss_pred cccCCHHHHHhcCCCCEEEEE
Confidence 666568899999999999864
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=97.64 E-value=0.00015 Score=55.27 Aligned_cols=94 Identities=16% Similarity=0.192 Sum_probs=73.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc-H
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS-L 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~-~ 262 (360)
.|++++|.|-|-+|.-.++-+|.+|++|++++.++-+. ++..+---++. ...+.-+..|+++-++|.... -
T Consensus 22 aGk~vvV~GYG~vGrG~A~~~rg~Ga~V~V~E~DPi~a--lqA~mdGf~v~------~~~~a~~~aDi~vTaTGn~~vI~ 93 (163)
T d1v8ba1 22 SGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICA--IQAVMEGFNVV------TLDEIVDKGDFFITCTGNVDVIK 93 (163)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHH--HHHHTTTCEEC------CHHHHTTTCSEEEECCSSSSSBC
T ss_pred cCCEEEEecccccchhHHHHHHhCCCEEEEEecCchhh--HHHHhcCCccC------chhHccccCcEEEEcCCCCcccc
Confidence 89999999999999999999999999999999999543 33323222222 233456788999999998754 4
Q ss_pred HHHHHHhccCCEEEEeCCCCCCc
Q 018158 263 GPILELLKVNGTLSVVGAPEAPF 285 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~~~~~~ 285 (360)
.+-++.|+++..+..+|-....+
T Consensus 94 ~~h~~~MKdgaIl~N~GHfd~EI 116 (163)
T d1v8ba1 94 LEHLLKMKNNAVVGNIGHFDDEI 116 (163)
T ss_dssp HHHHTTCCTTCEEEECSSTTTSB
T ss_pred HHHHHHhhCCeEEEeccccchhh
Confidence 67789999999999998766443
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.62 E-value=0.00015 Score=61.35 Aligned_cols=100 Identities=19% Similarity=0.180 Sum_probs=68.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH----cCCCeEe---eCccHHHH-------HhcCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL----LGADEFI---LSTNAMQM-------QAGKRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~----~g~~~~v---~~~~~~~~-------~~~~~~ 248 (360)
+|+++||+|+ +++|.+.++.+...|++|++++|+.++++.+.+. .+..... +..+.... ......
T Consensus 13 ~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~ 92 (269)
T d1xu9a_ 13 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG 92 (269)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCC
Confidence 7899999999 9999999999999999999999999988877553 2322211 22222111 112567
Q ss_pred cCEEEEcCCCc-------------------------ccHHHHHHHhc-cCCEEEEeCCCCC
Q 018158 249 LDFILDTVSAK-------------------------HSLGPILELLK-VNGTLSVVGAPEA 283 (360)
Q Consensus 249 ~d~vid~~g~~-------------------------~~~~~~~~~l~-~~G~~v~~g~~~~ 283 (360)
.|+++++.|.. ...+.++..|+ .+|+++.++...+
T Consensus 93 ~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~ 153 (269)
T d1xu9a_ 93 LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAG 153 (269)
T ss_dssp CSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGG
T ss_pred ccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchh
Confidence 89999887632 11344445554 4789998876543
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.62 E-value=0.00024 Score=54.40 Aligned_cols=95 Identities=20% Similarity=0.290 Sum_probs=73.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc-cH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH-SL 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~-~~ 262 (360)
.|++++|+|-|-+|.-.++.++.+|++|++++.++.+.-++.. -|. .+. ...+.-...|+++-++|... .-
T Consensus 23 ~Gk~v~V~GyG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~-dG~-~v~------~~~~a~~~adivvtaTGn~~vI~ 94 (163)
T d1li4a1 23 AGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAM-EGY-EVT------TMDEACQEGNIFVTTTGCIDIIL 94 (163)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTC-EEC------CHHHHTTTCSEEEECSSCSCSBC
T ss_pred cCCEEEEeccccccHHHHHHHHhCCCeeEeeecccchhHHhhc-Cce-Eee------ehhhhhhhccEEEecCCCccchh
Confidence 8999999999999999999999999999999999865443333 332 222 12334567899999999754 34
Q ss_pred HHHHHHhccCCEEEEeCCCCCCcc
Q 018158 263 GPILELLKVNGTLSVVGAPEAPFE 286 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~~~~~~~ 286 (360)
.+-++.|+++..++.+|.....+.
T Consensus 95 ~eh~~~MKdgaIL~N~Ghfd~EId 118 (163)
T d1li4a1 95 GRHFEQMKDDAIVCNIGHFDVEID 118 (163)
T ss_dssp HHHHTTCCTTEEEEECSSSTTSBC
T ss_pred HHHHHhccCCeEEEEeccccceec
Confidence 688899999988889887664443
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=97.61 E-value=0.00011 Score=60.04 Aligned_cols=94 Identities=17% Similarity=0.215 Sum_probs=67.2
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC-C--eEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA-D--EFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~-~--~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
+++|++||-+|+| .|..++.+++. +.+|+.++.+++..+.+++.+.. . .++..+...... ....||.|+-+.+.
T Consensus 68 l~~g~~VLdIG~G-sGy~ta~La~l-~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~~-~~~pfD~Iiv~~a~ 144 (224)
T d1vbfa_ 68 LHKGQKVLEIGTG-IGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE-EEKPYDRVVVWATA 144 (224)
T ss_dssp CCTTCEEEEECCT-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG-GGCCEEEEEESSBB
T ss_pred hcccceEEEecCC-CCHHHHHHHHH-hcccccccccHHHHHHHHHHHhcccccccccCchhhcch-hhhhHHHHHhhcch
Confidence 5599999999996 47777777775 67999999999988888775442 1 222222111111 14569999977666
Q ss_pred cccHHHHHHHhccCCEEEEe
Q 018158 259 KHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 259 ~~~~~~~~~~l~~~G~~v~~ 278 (360)
.......++.|++||+++..
T Consensus 145 ~~ip~~l~~qLk~GGrLV~p 164 (224)
T d1vbfa_ 145 PTLLCKPYEQLKEGGIMILP 164 (224)
T ss_dssp SSCCHHHHHTEEEEEEEEEE
T ss_pred hhhhHHHHHhcCCCCEEEEE
Confidence 65667889999999999875
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.60 E-value=0.00021 Score=59.88 Aligned_cols=75 Identities=19% Similarity=0.215 Sum_probs=55.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~~ 249 (360)
.|+++||+|+ +++|.++++.+...|++|+++++++++++.+.++ .|.+.. .|-.+.+..... -.++
T Consensus 10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i 89 (255)
T d1fmca_ 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV 89 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 6899999999 9999999999999999999999999887766543 454322 233333322221 3579
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++++++|.
T Consensus 90 DilvnnAG~ 98 (255)
T d1fmca_ 90 DILVNNAGG 98 (255)
T ss_dssp CEEEECCCC
T ss_pred CEeeeCCcC
Confidence 999999884
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=97.59 E-value=0.00043 Score=57.57 Aligned_cols=99 Identities=14% Similarity=0.113 Sum_probs=67.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhH-HHHHHHHcCCCeE---eeCccHHHHHhc-------CCCcCE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSK-EKEAKELLGADEF---ILSTNAMQMQAG-------KRTLDF 251 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~-~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~d~ 251 (360)
+|+++||+|+ +++|.++++.+...|++|+++++++++ .+...+.+|.... .|-.+.+..... -.++|+
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi 83 (247)
T d2ew8a1 4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI 83 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 6899999999 999999999999999999999987643 3333333675432 244444333221 467999
Q ss_pred EEEcCCCc-------------------------ccHHHHHHHhc--cCCEEEEeCCCC
Q 018158 252 ILDTVSAK-------------------------HSLGPILELLK--VNGTLSVVGAPE 282 (360)
Q Consensus 252 vid~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g~~~ 282 (360)
+++++|.. ...+.++..|+ .+|+++.++...
T Consensus 84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~ 141 (247)
T d2ew8a1 84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTT 141 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccch
Confidence 99999842 11345555564 358999998654
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=97.57 E-value=0.00055 Score=49.39 Aligned_cols=94 Identities=10% Similarity=-0.012 Sum_probs=67.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhH-HHHHHHHcCCCeEee-CccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSK-EKEAKELLGADEFIL-STNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~-~~~~~~~~g~~~~v~-~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
.|++|||+|+|.+|..-++.+...|++|++++..... ...+.+ -+....+. .-+. ..-.++++++.+++....
T Consensus 11 ~~k~vlVvG~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~-~~~i~~~~~~~~~----~dl~~~~lv~~at~d~~~ 85 (113)
T d1pjqa1 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWAN-EGMLTLVEGPFDE----TLLDSCWLAIAATDDDTV 85 (113)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHT-TTSCEEEESSCCG----GGGTTCSEEEECCSCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHh-cCCceeeccCCCH----HHhCCCcEEeecCCCHHH
Confidence 6899999999999999999999999999988865432 222222 22222221 1111 123579999999988866
Q ss_pred HHHHHHHhccCCEEEEeCCCC
Q 018158 262 LGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 262 ~~~~~~~l~~~G~~v~~g~~~ 282 (360)
-.++....++.|.++.+...+
T Consensus 86 n~~i~~~a~~~~ilVNv~D~p 106 (113)
T d1pjqa1 86 NQRVSDAAESRRIFCNVVDAP 106 (113)
T ss_dssp HHHHHHHHHHTTCEEEETTCT
T ss_pred HHHHHHHHHHcCCEEEeCCCh
Confidence 678888999999999886543
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.55 E-value=0.00012 Score=62.12 Aligned_cols=97 Identities=19% Similarity=0.303 Sum_probs=66.0
Q ss_pred CcEE-EEEcC-ChHHHHHHH-HHHHcCCeEEEEeCChhHHHHHHHHc---CCC-eE--eeCccHHHHHh-------cCCC
Q 018158 185 KKRI-GIVGL-GGLGHVAVK-FGKAFGHHVTVISTSPSKEKEAKELL---GAD-EF--ILSTNAMQMQA-------GKRT 248 (360)
Q Consensus 185 ~~~v-lI~Ga-g~vG~~aiq-la~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~~--v~~~~~~~~~~-------~~~~ 248 (360)
|++| ||+|+ +++|+++++ |++.-|++|++++|+.++.+.+.+.+ |.. .. .|-.+.+..+. ...+
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~ 81 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 81 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 5566 77899 999998765 55666899999999999887765544 322 11 24444433221 2467
Q ss_pred cCEEEEcCCCc-------------------------ccHHHHHHHhccCCEEEEeCCC
Q 018158 249 LDFILDTVSAK-------------------------HSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 249 ~d~vid~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
+|++|+.+|.. ...+.++..|++.|+++.++..
T Consensus 82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~ 139 (275)
T d1wmaa1 82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSI 139 (275)
T ss_dssp EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence 99999999842 1134556667888999998753
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=97.53 E-value=0.0003 Score=58.99 Aligned_cols=99 Identities=12% Similarity=0.161 Sum_probs=67.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHH----HcCCCeE---eeCccHHHHHhc-------CC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSP-SKEKEAKE----LLGADEF---ILSTNAMQMQAG-------KR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~-~~~~~~~~----~~g~~~~---v~~~~~~~~~~~-------~~ 247 (360)
+|+++||+|+ +++|.++++.+...|++|+++++++ ++++.+.+ ..|.... .|-.+.+..... -.
T Consensus 3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 82 (260)
T d1x1ta1 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 6899999999 9999999999999999999999864 44444432 2344332 244443333221 35
Q ss_pred CcCEEEEcCCCc-------------------------ccHHHHHHHhcc--CCEEEEeCCCC
Q 018158 248 TLDFILDTVSAK-------------------------HSLGPILELLKV--NGTLSVVGAPE 282 (360)
Q Consensus 248 ~~d~vid~~g~~-------------------------~~~~~~~~~l~~--~G~~v~~g~~~ 282 (360)
++|++++++|.. ...+.++..|++ +|+++.++...
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~ 144 (260)
T d1x1ta1 83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAH 144 (260)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeeccccc
Confidence 799999999843 123455666653 58999997654
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.50 E-value=2.9e-05 Score=64.53 Aligned_cols=93 Identities=24% Similarity=0.222 Sum_probs=62.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe--eCccH---HHH----Hh-c-CCCcCE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI--LSTNA---MQM----QA-G-KRTLDF 251 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v--~~~~~---~~~----~~-~-~~~~d~ 251 (360)
+|+++||+|+ +++|.+.++.+...|++|+.+++++.+.. .....+ +.... +.. .. . ..++|+
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~ 74 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA 74 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------cccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence 4899999999 99999999999999999999987654311 111111 11111 111 11 1 346999
Q ss_pred EEEcCCCc--------------------------ccHHHHHHHhccCCEEEEeCCCC
Q 018158 252 ILDTVSAK--------------------------HSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 252 vid~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+++++|.. ...+.++..|+++|+++.++...
T Consensus 75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~ 131 (236)
T d1dhra_ 75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKA 131 (236)
T ss_dssp EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHH
Confidence 99998731 12345667778899999997654
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.50 E-value=0.00014 Score=59.73 Aligned_cols=96 Identities=17% Similarity=0.150 Sum_probs=66.9
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHc---CC-----CeE-eeCccHHHHHhcCCCcC
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKELL---GA-----DEF-ILSTNAMQMQAGKRTLD 250 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~~---g~-----~~~-v~~~~~~~~~~~~~~~d 250 (360)
+++|++||-+|+|. |..++.+|+..|. +|+.++.+++-.+.+++.+ +. ..+ +...+..........||
T Consensus 74 l~~g~~VLdiG~Gs-Gy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~~~~~~fD 152 (224)
T d1i1na_ 74 LHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYD 152 (224)
T ss_dssp SCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEE
T ss_pred cCCCCeEEEecCCC-CHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccccchhhhhh
Confidence 44999999999964 8888888888764 8999999998777765543 21 111 11111111111245799
Q ss_pred EEEEcCCCcccHHHHHHHhccCCEEEEe
Q 018158 251 FILDTVSAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 251 ~vid~~g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
.|+.+.+.......+++.|++||+++..
T Consensus 153 ~I~~~~~~~~ip~~l~~~LkpGG~LV~p 180 (224)
T d1i1na_ 153 AIHVGAAAPVVPQALIDQLKPGGRLILP 180 (224)
T ss_dssp EEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred hhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence 9998777666668899999999999874
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=97.50 E-value=0.00019 Score=60.23 Aligned_cols=75 Identities=15% Similarity=0.120 Sum_probs=56.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHh--------cCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQA--------GKRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~--------~~~~ 248 (360)
+|+++||+|+ +++|.+.++.+...|++|+++++++++++.+.+. .+.... .|-.+.+..+. .+..
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~ 84 (258)
T d1ae1a_ 5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK 84 (258)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 6899999999 9999999999999999999999999887766554 343322 24444433211 1356
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
.|+++++.|.
T Consensus 85 idilinnag~ 94 (258)
T d1ae1a_ 85 LNILVNNAGV 94 (258)
T ss_dssp CCEEEECCCC
T ss_pred cEEEeccccc
Confidence 9999999884
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.41 E-value=0.00048 Score=59.06 Aligned_cols=99 Identities=14% Similarity=0.129 Sum_probs=66.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC---------hhHHHHHHHH---cCCCeEeeCccHHHH-------H
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTS---------PSKEKEAKEL---LGADEFILSTNAMQM-------Q 243 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~---------~~~~~~~~~~---~g~~~~v~~~~~~~~-------~ 243 (360)
.|+++||+|+ +++|.+.++.+...|++|++.+++ .+..+.+.+. .+.....+..+.+.. .
T Consensus 6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~ 85 (302)
T d1gz6a_ 6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL 85 (302)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence 6899999999 999999999999999999998654 3333333322 233334444443222 1
Q ss_pred hcCCCcCEEEEcCCCc-------------------------ccHHHHHHHhc--cCCEEEEeCCCC
Q 018158 244 AGKRTLDFILDTVSAK-------------------------HSLGPILELLK--VNGTLSVVGAPE 282 (360)
Q Consensus 244 ~~~~~~d~vid~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g~~~ 282 (360)
...+++|++++++|.. ...+.++..|+ .+|+|+.++...
T Consensus 86 ~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~ 151 (302)
T d1gz6a_ 86 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASAS 151 (302)
T ss_dssp HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHH
T ss_pred HHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChh
Confidence 1256899999999842 12455666664 358999998644
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=97.41 E-value=0.00077 Score=56.45 Aligned_cols=75 Identities=19% Similarity=0.102 Sum_probs=52.3
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPS-KEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~-~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~ 248 (360)
.|+++||+|+ +++|.+.++.+-..|++|++++++.+ ..+.+.+. .|.+.. .|-.+.+..... -.+
T Consensus 6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~ 85 (261)
T d1geea_ 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK 85 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 6899999999 99999999999999999999998754 33333221 554322 244444332221 357
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|++++++|.
T Consensus 86 iDiLVnnAG~ 95 (261)
T d1geea_ 86 LDVMINNAGL 95 (261)
T ss_dssp CCEEEECCCC
T ss_pred CCEeecccee
Confidence 9999999984
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=97.40 E-value=0.00017 Score=56.45 Aligned_cols=94 Identities=18% Similarity=0.155 Sum_probs=62.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-eEeeCccHHHHHhcCCCcCEEEEcCCCccc-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-EFILSTNAMQMQAGKRTLDFILDTVSAKHS- 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~~~~~d~vid~~g~~~~- 261 (360)
++++|+|+|+|+.+.+++..+...+.+|+++.|+.++.+.+.+.++.. .+...... ...-..+|++|+|++....
T Consensus 17 ~~k~vlIlGaGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~---~~~~~~~diiIN~tp~g~~~ 93 (171)
T d1p77a1 17 PNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMD---SIPLQTYDLVINATSAGLSG 93 (171)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG---GCCCSCCSEEEECCCC----
T ss_pred CCCEEEEECCcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhc---cccccccceeeecccccccc
Confidence 789999999999999998888877778999999999988887766521 11111111 1124679999999975311
Q ss_pred --HHHHHHHhccCCEEEEeCC
Q 018158 262 --LGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 262 --~~~~~~~l~~~G~~v~~g~ 280 (360)
.......++++..++++-.
T Consensus 94 ~~~~~~~~~~~~~~~~~D~vy 114 (171)
T d1p77a1 94 GTASVDAEILKLGSAFYDMQY 114 (171)
T ss_dssp ---CCCHHHHHHCSCEEESCC
T ss_pred cccchhhhhhcccceeeeeec
Confidence 0112244556666666543
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.38 E-value=0.00058 Score=57.58 Aligned_cols=99 Identities=16% Similarity=0.112 Sum_probs=68.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHH---HcCCCeEe---eCccHHHHH-------hcCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSP-SKEKEAKE---LLGADEFI---LSTNAMQMQ-------AGKRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~-~~~~~~~~---~~g~~~~v---~~~~~~~~~-------~~~~~ 248 (360)
.|+++||+|+ +++|.++++.+...|++|++++++. +..+.+.+ +.|.+... |-.+.+... +...+
T Consensus 17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 96 (272)
T d1g0oa_ 17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK 96 (272)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 6899999999 9999999999999999999998764 43333322 15544332 333332221 12467
Q ss_pred cCEEEEcCCCc-------------------------ccHHHHHHHhccCCEEEEeCCCC
Q 018158 249 LDFILDTVSAK-------------------------HSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 249 ~d~vid~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+|+++++.|.. ...+.+...|...|+++.++...
T Consensus 97 idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~ 155 (272)
T d1g0oa_ 97 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSIT 155 (272)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGG
T ss_pred CCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccc
Confidence 99999998843 12467777888889998887543
|
| >d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein Ta0852 species: Thermoplasma acidophilum [TaxId: 2303]
Probab=97.37 E-value=0.00029 Score=58.55 Aligned_cols=95 Identities=15% Similarity=0.179 Sum_probs=66.6
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHc---C-CCeEe-eCccHHHHHhcCCCcCEEEE
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKELL---G-ADEFI-LSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~~---g-~~~~v-~~~~~~~~~~~~~~~d~vid 254 (360)
++||++||=.|+|. |.++..+|+..|. +|+.++.+++..+.+++++ + ...+- ...+.... .....+|.|+-
T Consensus 83 i~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~-~~~~~fD~V~l 160 (250)
T d1yb2a1 83 LRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF-ISDQMYDAVIA 160 (250)
T ss_dssp CCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC-CCSCCEEEEEE
T ss_pred CCCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeecc-cccceeeeeee
Confidence 55999999999864 7777888887754 7999999999988888753 2 22221 11111110 11456998874
Q ss_pred cCC-CcccHHHHHHHhccCCEEEEe
Q 018158 255 TVS-AKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 255 ~~g-~~~~~~~~~~~l~~~G~~v~~ 278 (360)
-.. ....+..+.+.|++||+++.+
T Consensus 161 d~p~p~~~l~~~~~~LKpGG~lv~~ 185 (250)
T d1yb2a1 161 DIPDPWNHVQKIASMMKPGSVATFY 185 (250)
T ss_dssp CCSCGGGSHHHHHHTEEEEEEEEEE
T ss_pred cCCchHHHHHHHHHhcCCCceEEEE
Confidence 333 345689999999999999876
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.37 E-value=0.00073 Score=52.26 Aligned_cols=87 Identities=23% Similarity=0.221 Sum_probs=62.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC-CeEeeCccHHHHHhcCCCcCEEEEcCCCcc---cH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA-DEFILSTNAMQMQAGKRTLDFILDTVSAKH---SL 262 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~-~~~v~~~~~~~~~~~~~~~d~vid~~g~~~---~~ 262 (360)
+|.|+|+|.+|...+..++..|.+|++.++++++.+.+++ .|. +...+.. +.-+..|+||-|+.... .+
T Consensus 2 kI~iIG~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~-~~~~~~~~~~~------~~~~~~DiIilavp~~~~~~vl 74 (165)
T d2f1ka2 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVE-RQLVDEAGQDL------SLLQTAKIIFLCTPIQLILPTL 74 (165)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTSCSEEESCG------GGGTTCSEEEECSCHHHHHHHH
T ss_pred EEEEEeecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHH-hhccceeeeec------ccccccccccccCcHhhhhhhh
Confidence 5789999999999888889999999999999999999888 774 4333221 12467899999886442 23
Q ss_pred HHHHHHhccCCEEEEeCC
Q 018158 263 GPILELLKVNGTLSVVGA 280 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~ 280 (360)
+++...++++..++.++.
T Consensus 75 ~~l~~~l~~~~iv~~~~s 92 (165)
T d2f1ka2 75 EKLIPHLSPTAIVTDVAS 92 (165)
T ss_dssp HHHGGGSCTTCEEEECCS
T ss_pred hhhhhhcccccceeeccc
Confidence 333344445555556653
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=97.37 E-value=0.00024 Score=53.05 Aligned_cols=74 Identities=20% Similarity=0.352 Sum_probs=57.1
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe-eCccHHHHHhc-CCCcCEEEEcCCCcc
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI-LSTNAMQMQAG-KRTLDFILDTVSAKH 260 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~-~~~~d~vid~~g~~~ 260 (360)
++++|+|.|.+|..+++.+...|.+|++++.++++.+.+++ .|...++ |..+.+.+... -..+|.++-+++...
T Consensus 1 k~~iIiG~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~-~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~~~ 76 (134)
T d2hmva1 1 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS-YATHAVIANATEENELLSLGIRNFEYVIVAIGANI 76 (134)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT-TCSEEEECCTTCTTHHHHHTGGGCSEEEECCCSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH-hCCcceeeecccchhhhccCCccccEEEEEcCchH
Confidence 35788999999999999999999999999999999999887 6653332 34444444444 356899988887653
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.36 E-value=0.00035 Score=55.23 Aligned_cols=97 Identities=12% Similarity=0.070 Sum_probs=63.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHH---HcC----C-CeEeeCccHHHHHhcCCCcCEEEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKE---LLG----A-DEFILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~---~~g----~-~~~v~~~~~~~~~~~~~~~d~vid 254 (360)
.+++|+|+|+|+.+.+++..+...|+ +++++.|+.++.+.+.+ +++ . ....+..+..........+|++|+
T Consensus 17 ~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diiIN 96 (182)
T d1vi2a1 17 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTN 96 (182)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccceecc
Confidence 67999999999999999999999998 69999998765554332 122 1 223344444444444568999999
Q ss_pred cCCCcc------cHHHHHHHhccCCEEEEeCC
Q 018158 255 TVSAKH------SLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 255 ~~g~~~------~~~~~~~~l~~~G~~v~~g~ 280 (360)
|++... .+..-...++++..++++-.
T Consensus 97 ~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y 128 (182)
T d1vi2a1 97 GTKVGMKPLENESLVNDISLLHPGLLVTECVY 128 (182)
T ss_dssp CSSTTSTTSCSCCSCCCGGGSCTTCEEEECCC
T ss_pred ccCCccccccchhhhhHHHhhhcchhhHHhhc
Confidence 986321 11111245677777777743
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.33 E-value=0.0003 Score=59.45 Aligned_cols=75 Identities=19% Similarity=0.289 Sum_probs=55.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CC--CeE----eeCccHHHHHhc-------C
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GA--DEF----ILSTNAMQMQAG-------K 246 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~--~~~----v~~~~~~~~~~~-------~ 246 (360)
.|+++||+|+ +++|.++++.+...|++|+++++++++++.+.+.+ +. ..+ .|-.+.+..... -
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 83 (272)
T d1xkqa_ 4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 83 (272)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 6899999999 99999999999999999999999999887766543 21 111 244444333221 4
Q ss_pred CCcCEEEEcCCC
Q 018158 247 RTLDFILDTVSA 258 (360)
Q Consensus 247 ~~~d~vid~~g~ 258 (360)
.++|++++++|.
T Consensus 84 g~iDilvnnAG~ 95 (272)
T d1xkqa_ 84 GKIDVLVNNAGA 95 (272)
T ss_dssp SCCCEEEECCCC
T ss_pred CCceEEEeCCcc
Confidence 679999999874
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=97.33 E-value=0.00047 Score=58.88 Aligned_cols=75 Identities=16% Similarity=0.135 Sum_probs=55.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH----cCCCeE---eeCccHHHHH-------hcCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL----LGADEF---ILSTNAMQMQ-------AGKRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~----~g~~~~---v~~~~~~~~~-------~~~~~ 248 (360)
.|+++||+|+ +++|.++++.+...|++|++++++.++++.+.++ .|.... .|-.+.+... ....+
T Consensus 24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 103 (294)
T d1w6ua_ 24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH 103 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccc
Confidence 6899999999 9999999999999999999999999876654433 343322 2333333222 22578
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|+++++.|.
T Consensus 104 iDilvnnAg~ 113 (294)
T d1w6ua_ 104 PNIVINNAAG 113 (294)
T ss_dssp CSEEEECCCC
T ss_pred cchhhhhhhh
Confidence 9999999984
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=97.33 E-value=0.0005 Score=57.42 Aligned_cols=75 Identities=21% Similarity=0.300 Sum_probs=51.7
Q ss_pred CCcEEEEEcC-C--hHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeEe--eCccHHHHHh-------cCCC
Q 018158 184 AKKRIGIVGL-G--GLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEFI--LSTNAMQMQA-------GKRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g--~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~v--~~~~~~~~~~-------~~~~ 248 (360)
.|+++||+|+ | ++|.+.++.+...|++|++.+++++..+.+.+. .+....+ |-.+.+..+. .-.+
T Consensus 7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (256)
T d1ulua_ 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG 86 (256)
T ss_dssp TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence 6899999998 6 799999999989999999999887655444331 3322222 3333322222 1457
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|+++++.|.
T Consensus 87 iDilVnnag~ 96 (256)
T d1ulua_ 87 LDYLVHAIAF 96 (256)
T ss_dssp EEEEEECCCC
T ss_pred ceEEEecccc
Confidence 9999998874
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.32 E-value=0.00034 Score=59.88 Aligned_cols=75 Identities=19% Similarity=0.187 Sum_probs=55.1
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc--------CCCeE---eeCccHHHHHhc------
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL--------GADEF---ILSTNAMQMQAG------ 245 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~--------g~~~~---v~~~~~~~~~~~------ 245 (360)
+|+++||+|+ +++|.++++.+...|++|++++++.++++.+.+.+ +...+ .|-.+.+.....
T Consensus 11 ~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~ 90 (297)
T d1yxma1 11 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD 90 (297)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHH
Confidence 7999999999 99999999999999999999999998876665433 22211 243444333221
Q ss_pred -CCCcCEEEEcCCC
Q 018158 246 -KRTLDFILDTVSA 258 (360)
Q Consensus 246 -~~~~d~vid~~g~ 258 (360)
-.++|+++++.|.
T Consensus 91 ~~G~iDiLVnnAg~ 104 (297)
T d1yxma1 91 TFGKINFLVNNGGG 104 (297)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HhCCeEEEEeeccc
Confidence 4579999999884
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.31 E-value=0.00017 Score=59.77 Aligned_cols=95 Identities=13% Similarity=0.155 Sum_probs=65.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhc-------CCCcCEEEEc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAG-------KRTLDFILDT 255 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~-------~~~~d~vid~ 255 (360)
.|+++||+|+ +++|.++++.+...|++|++++++.++.+.+.. ...|-.+.+..... ..++|+++++
T Consensus 6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~-----~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnn 80 (237)
T d1uzma1 6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFG-----VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN 80 (237)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEE-----EECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCceE-----EEEecCCHHHHHHHHHHHHHhcCCceEEEee
Confidence 6899999999 999999999999999999999998765432211 22344444333221 4579999999
Q ss_pred CCCc-------------------------ccHHHHHHHhc--cCCEEEEeCCCCC
Q 018158 256 VSAK-------------------------HSLGPILELLK--VNGTLSVVGAPEA 283 (360)
Q Consensus 256 ~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g~~~~ 283 (360)
+|.. ...+.++..|+ .+|+++.++...+
T Consensus 81 AG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~ 135 (237)
T d1uzma1 81 AGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSG 135 (237)
T ss_dssp CSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC
T ss_pred ecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhh
Confidence 8832 11234444554 3469999987653
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.31 E-value=0.0004 Score=58.19 Aligned_cols=98 Identities=19% Similarity=0.133 Sum_probs=67.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHH---cCCCeE---eeCccHHHHHh-------cCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIST-SPSKEKEAKEL---LGADEF---ILSTNAMQMQA-------GKRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~-~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~-------~~~~ 248 (360)
.|+++||+|+ +++|.+.++.+...|++|+++++ +++..+.+.+. .|.+.. .|..+.+.... ...+
T Consensus 5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 84 (259)
T d1ja9a_ 5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG 84 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCC
Confidence 6999999999 99999999999999999988754 44444443332 565433 24433322222 1457
Q ss_pred cCEEEEcCCCc-------------------------ccHHHHHHHhccCCEEEEeCCC
Q 018158 249 LDFILDTVSAK-------------------------HSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 249 ~d~vid~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
+|+++++.|.. ...+.++..|+++|+++.+...
T Consensus 85 idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~ 142 (259)
T d1ja9a_ 85 LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSI 142 (259)
T ss_dssp EEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred CcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccc
Confidence 99999999843 1246777888888888877653
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.29 E-value=0.00075 Score=53.00 Aligned_cols=84 Identities=23% Similarity=0.231 Sum_probs=59.0
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe--------eCcc-HHHHHhcCCCcCEEEEc
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI--------LSTN-AMQMQAGKRTLDFILDT 255 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v--------~~~~-~~~~~~~~~~~d~vid~ 255 (360)
.+++.|+|+|.+|++.+..+...|.+|+++++++++.+.+++ .+..... .... .....+.-+.+|++|-+
T Consensus 1 sk~iaIiGaG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~ 79 (184)
T d1bg6a2 1 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD-RGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 79 (184)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-HTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEE
Confidence 368999999999999999999999999999999999988887 4421110 0000 01123334679999999
Q ss_pred CCCcccHHHHHHHhc
Q 018158 256 VSAKHSLGPILELLK 270 (360)
Q Consensus 256 ~g~~~~~~~~~~~l~ 270 (360)
+.... ...+++.++
T Consensus 80 v~~~~-~~~~~~~i~ 93 (184)
T d1bg6a2 80 VPAIH-HASIAANIA 93 (184)
T ss_dssp SCGGG-HHHHHHHHG
T ss_pred EchhH-HHHHHHHhh
Confidence 97663 355544444
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.28 E-value=0.00013 Score=58.86 Aligned_cols=95 Identities=18% Similarity=0.188 Sum_probs=66.2
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhcCCCcCEEEEcCCCcc--
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAGKRTLDFILDTVSAKH-- 260 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g~~~-- 260 (360)
.++|+|+|+ |.+|..++..+...|.+|+++.|+++++..... .+.+.+ .|..+.+.+...-.+.|+||.++|...
T Consensus 3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~~~ 81 (205)
T d1hdoa_ 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP-RPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDL 81 (205)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSC-CCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccc-cccccccccccchhhHHHHhcCCCEEEEEeccCCch
Confidence 468999999 999999999888889999999999887554322 333322 255555555555678999999997431
Q ss_pred --------cHHHHHHHhccCC--EEEEeCC
Q 018158 261 --------SLGPILELLKVNG--TLSVVGA 280 (360)
Q Consensus 261 --------~~~~~~~~l~~~G--~~v~~g~ 280 (360)
....+++.++..| +++.++.
T Consensus 82 ~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss 111 (205)
T d1hdoa_ 82 SPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (205)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred hhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence 1234556666543 7777754
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.27 E-value=0.00035 Score=48.51 Aligned_cols=72 Identities=24% Similarity=0.217 Sum_probs=49.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChh--HHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS--KEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~--~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
.|++|+|+|.|..|+++++++...|++|++.+.+.. ..+.+++ +....+...+.... ..+|.++-+-|-...
T Consensus 4 ~~K~v~ViGlG~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~d~vi~SPGi~~~ 77 (93)
T d2jfga1 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPE--AVERHTGSLNDEWL----MAADLIVASPGIALA 77 (93)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCT--TSCEEESBCCHHHH----HHCSEEEECTTSCTT
T ss_pred CCCEEEEEeECHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhh--ccceeecccchhhh----ccCCEEEECCCCCCC
Confidence 578999999999999999999999999999997543 2222211 22233333222222 357999988876543
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=97.25 E-value=0.0012 Score=54.49 Aligned_cols=98 Identities=12% Similarity=0.134 Sum_probs=67.5
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCe-------EEEEeCChhHHHHHHHHc---CCCeE---eeCccHHHHHh-------
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHH-------VTVISTSPSKEKEAKELL---GADEF---ILSTNAMQMQA------- 244 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~-------V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~------- 244 (360)
+.+||+|+ +++|.+.+..+-..|++ |+..+++.++++.+.+.+ |.... .|-.+.+....
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 34788999 99999999888888987 899999998887765543 43211 24444433322
Q ss_pred cCCCcCEEEEcCCCc-------------------------ccHHHHHHHhc--cCCEEEEeCCCCC
Q 018158 245 GKRTLDFILDTVSAK-------------------------HSLGPILELLK--VNGTLSVVGAPEA 283 (360)
Q Consensus 245 ~~~~~d~vid~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g~~~~ 283 (360)
.-+++|+++++.|.. ...+.++..|+ .+|+++.++...+
T Consensus 82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~ 147 (240)
T d2bd0a1 82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA 147 (240)
T ss_dssp HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhh
Confidence 246799999999843 12456666775 3689999976543
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=97.25 E-value=0.002 Score=53.54 Aligned_cols=73 Identities=16% Similarity=0.168 Sum_probs=53.0
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHhc-------CCCcCE
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQAG-------KRTLDF 251 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~~d~ 251 (360)
+.+||+|+ +++|.+.++.+...|++|+++++++++++.+.+. .|.+.. .|-.+.+..... -.++|+
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 81 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV 81 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence 45689999 9999999988888999999999999887766543 453322 244444333221 467999
Q ss_pred EEEcCCC
Q 018158 252 ILDTVSA 258 (360)
Q Consensus 252 vid~~g~ 258 (360)
+++++|.
T Consensus 82 lVnnAG~ 88 (255)
T d1gega_ 82 IVNNAGV 88 (255)
T ss_dssp EEECCCC
T ss_pred EEecccc
Confidence 9999883
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=97.25 E-value=0.00076 Score=56.32 Aligned_cols=74 Identities=12% Similarity=0.109 Sum_probs=54.6
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE---eeCccHHHHHh-------cCCCcC
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF---ILSTNAMQMQA-------GKRTLD 250 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~-------~~~~~d 250 (360)
|+.+||+|+ +++|.+.++.+...|++|+++++++++++.+.+. .|.... .|-.+.+..+. .-.++|
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD 81 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD 81 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 678899999 9999999999999999999999999887766543 443322 24344433322 146799
Q ss_pred EEEEcCCC
Q 018158 251 FILDTVSA 258 (360)
Q Consensus 251 ~vid~~g~ 258 (360)
++++++|.
T Consensus 82 ilVnnAG~ 89 (257)
T d2rhca1 82 VLVNNAGR 89 (257)
T ss_dssp EEEECCCC
T ss_pred EEEecccc
Confidence 99999984
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.24 E-value=0.00034 Score=59.14 Aligned_cols=74 Identities=20% Similarity=0.282 Sum_probs=55.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CC--CeE----eeCccHHHHHhc-------C
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GA--DEF----ILSTNAMQMQAG-------K 246 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~--~~~----v~~~~~~~~~~~-------~ 246 (360)
.|+++||+|+ +++|.+.++.+-..|++|+++++++++++.+++.+ |. ..+ .|-.+.+..... -
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 82 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 6899999999 99999999999999999999999998877765543 32 112 244444333221 3
Q ss_pred CCcCEEEEcCC
Q 018158 247 RTLDFILDTVS 257 (360)
Q Consensus 247 ~~~d~vid~~g 257 (360)
+++|+++++.|
T Consensus 83 G~iDilVnnAG 93 (274)
T d1xhla_ 83 GKIDILVNNAG 93 (274)
T ss_dssp SCCCEEEECCC
T ss_pred CCceEEEeecc
Confidence 57999999987
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=97.22 E-value=0.0015 Score=54.39 Aligned_cols=99 Identities=13% Similarity=0.127 Sum_probs=64.7
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHH---HHcCCCeE----eeCc-cHHHHHh-------cCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAK---ELLGADEF----ILST-NAMQMQA-------GKR 247 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~---~~~g~~~~----v~~~-~~~~~~~-------~~~ 247 (360)
.|+++||+|+ +++|.+++..+-..|++|++++++.++.+.+. +..+...+ .|.. +.+.... .-+
T Consensus 4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g 83 (254)
T d1sbya1 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence 6899999999 99999999888889999999987766544433 32332222 2222 2211211 145
Q ss_pred CcCEEEEcCCCcc-----------------cHHHHHHHhcc-----CCEEEEeCCCC
Q 018158 248 TLDFILDTVSAKH-----------------SLGPILELLKV-----NGTLSVVGAPE 282 (360)
Q Consensus 248 ~~d~vid~~g~~~-----------------~~~~~~~~l~~-----~G~~v~~g~~~ 282 (360)
++|++++++|... ..+.++..|.. +|+++.++...
T Consensus 84 ~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~ 140 (254)
T d1sbya1 84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVT 140 (254)
T ss_dssp CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGG
T ss_pred CCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechh
Confidence 7999999998431 23455555633 58899887654
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.22 E-value=0.00037 Score=58.57 Aligned_cols=75 Identities=20% Similarity=0.256 Sum_probs=55.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CC--CeE----eeCccHHHHHhc-------C
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GA--DEF----ILSTNAMQMQAG-------K 246 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~--~~~----v~~~~~~~~~~~-------~ 246 (360)
.|+++||+|+ +++|.+.++.+...|++|+++++++++++.+.+.+ |. ..+ .|-.+.+..... -
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 83 (264)
T d1spxa_ 4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 83 (264)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 6899999999 99999999999999999999999999887765543 21 112 244444333221 4
Q ss_pred CCcCEEEEcCCC
Q 018158 247 RTLDFILDTVSA 258 (360)
Q Consensus 247 ~~~d~vid~~g~ 258 (360)
.++|++++++|.
T Consensus 84 g~iDilvnnAG~ 95 (264)
T d1spxa_ 84 GKLDILVNNAGA 95 (264)
T ss_dssp SCCCEEEECCC-
T ss_pred CCCCEeeccccc
Confidence 689999999873
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=97.22 E-value=0.00054 Score=57.38 Aligned_cols=75 Identities=20% Similarity=0.197 Sum_probs=54.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH----cCCCeE---eeCccHHHHHh-------cCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL----LGADEF---ILSTNAMQMQA-------GKRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~----~g~~~~---v~~~~~~~~~~-------~~~~ 248 (360)
.|+++||+|+ +++|.++++.+...|++|++++++.+++..+.++ +|.+.. .|-.+.+.... ...+
T Consensus 8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 87 (260)
T d1h5qa_ 8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP 87 (260)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 6899999999 9999999999999999999999998766544332 454322 24444433222 2468
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|+++++.|.
T Consensus 88 iDilVnnAg~ 97 (260)
T d1h5qa_ 88 ISGLIANAGV 97 (260)
T ss_dssp EEEEEECCCC
T ss_pred CcEecccccc
Confidence 9999999873
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.21 E-value=0.0011 Score=55.13 Aligned_cols=97 Identities=9% Similarity=0.067 Sum_probs=66.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeEeeCccHHHH----HhcCCCcCEEEEcCCC
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEFILSTNAMQM----QAGKRTLDFILDTVSA 258 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~v~~~~~~~~----~~~~~~~d~vid~~g~ 258 (360)
++||+|+ +++|+++++.+...|++|++.+++.++++.+++. +....+.+..+...+ .+.-.++|+++++.|.
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~ 81 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIF 81 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcC
Confidence 6899999 9999999999999999999999988877776552 223344444443222 1224679999987763
Q ss_pred c--------------------------ccHHHHHHHhc--cCCEEEEeCCCCC
Q 018158 259 K--------------------------HSLGPILELLK--VNGTLSVVGAPEA 283 (360)
Q Consensus 259 ~--------------------------~~~~~~~~~l~--~~G~~v~~g~~~~ 283 (360)
. ...+.++..|+ .+|+|+.++...+
T Consensus 82 ~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~ 134 (252)
T d1zmta1 82 APEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATP 134 (252)
T ss_dssp CCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTT
T ss_pred CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccc
Confidence 1 01234555554 3689999987653
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.20 E-value=6.6e-05 Score=62.21 Aligned_cols=92 Identities=20% Similarity=0.220 Sum_probs=60.9
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCc----cH-----HHHHh--cCCCcCEE
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILST----NA-----MQMQA--GKRTLDFI 252 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~----~~-----~~~~~--~~~~~d~v 252 (360)
+.+|||+|+ +++|.+.++.+...|++|+++++++++... ....+... +. ..... ...++|++
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l 75 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD------SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV 75 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS------EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccc------ccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence 356899999 999999999999999999999988653211 01111000 00 01111 14679999
Q ss_pred EEcCCCc--------------------------ccHHHHHHHhccCCEEEEeCCCC
Q 018158 253 LDTVSAK--------------------------HSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 253 id~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
++++|.. ...+.++..|+++|+++.++...
T Consensus 76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~ 131 (235)
T d1ooea_ 76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAA 131 (235)
T ss_dssp EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHH
Confidence 9998831 11356667778899999998654
|
| >d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Methoxy mycolic acid synthase 4, Mma4 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.17 E-value=0.0014 Score=55.42 Aligned_cols=95 Identities=12% Similarity=0.130 Sum_probs=65.2
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeEeeCccHHHHHhcCCCcCEEEEcC--
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEFILSTNAMQMQAGKRTLDFILDTV-- 256 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~v~~~~~~~~~~~~~~~d~vid~~-- 256 (360)
+++|++||=+|+|. |-.+..+++..|++|++++.+++..+.++++. |....+..... ........+|.|+..-
T Consensus 50 l~~g~~VLDiGCG~-G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~-d~~~~~~~fD~i~si~~~ 127 (280)
T d2fk8a1 50 LKPGMTLLDIGCGW-GTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ-GWEDFAEPVDRIVSIEAF 127 (280)
T ss_dssp CCTTCEEEEESCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CGGGCCCCCSEEEEESCG
T ss_pred CCCCCEEEEecCCc-hHHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhh-hhhhhccchhhhhHhhHH
Confidence 55999999999964 34567788889999999999999988877753 42211111111 1223456899987432
Q ss_pred ---CCc---ccHHHHHHHhccCCEEEEe
Q 018158 257 ---SAK---HSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 257 ---g~~---~~~~~~~~~l~~~G~~v~~ 278 (360)
+.. ..++.+.++|+++|+++.-
T Consensus 128 eh~~~~~~~~~f~~i~~~LkpgG~~~i~ 155 (280)
T d2fk8a1 128 EHFGHENYDDFFKRCFNIMPADGRMTVQ 155 (280)
T ss_dssp GGTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred HHhhhhhHHHHHHHHHhccCCCceEEEE
Confidence 222 2478889999999999763
|
| >d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA2 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.16 E-value=0.0012 Score=56.07 Aligned_cols=94 Identities=11% Similarity=0.053 Sum_probs=64.1
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeEeeCccHHHHHhcCCCcCEEEEcC--
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEFILSTNAMQMQAGKRTLDFILDTV-- 256 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~v~~~~~~~~~~~~~~~d~vid~~-- 256 (360)
+++|++||=+|+|- |-.+..+|+..|++|++++.+++..+.++++ .|....+..... ........||.|+..-
T Consensus 59 l~~G~~VLDiGCG~-G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~-d~~~~~~~fD~i~sie~~ 136 (291)
T d1kpia_ 59 LEPGMTLLDIGCGW-GSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ-GWEEFDEPVDRIVSLGAF 136 (291)
T ss_dssp CCTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEEC-CGGGCCCCCSEEEEESCG
T ss_pred CCCCCEEEEecCcc-hHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhh-cccccccccceEeechhH
Confidence 55999999999963 4457889999999999999999986665553 453222211111 1123356799987522
Q ss_pred ---CC----------cccHHHHHHHhccCCEEEE
Q 018158 257 ---SA----------KHSLGPILELLKVNGTLSV 277 (360)
Q Consensus 257 ---g~----------~~~~~~~~~~l~~~G~~v~ 277 (360)
+. ...++.+.++|+|||+++.
T Consensus 137 eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l 170 (291)
T d1kpia_ 137 EHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLL 170 (291)
T ss_dssp GGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEE
T ss_pred HhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEE
Confidence 22 1247889999999999875
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=97.16 E-value=0.00026 Score=56.36 Aligned_cols=95 Identities=11% Similarity=-0.006 Sum_probs=64.6
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe---------eCcc-------H-HHHHh
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI---------LSTN-------A-MQMQA 244 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v---------~~~~-------~-~~~~~ 244 (360)
+.||.+||.+|+|. |..++.+|+. |++|++++.+++.++.++++.+..... .... . +....
T Consensus 18 ~~~~~rvLd~GCG~-G~~a~~la~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 95 (201)
T d1pjza_ 18 VVPGARVLVPLCGK-SQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 95 (201)
T ss_dssp CCTTCEEEETTTCC-SHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred CCCCCEEEEecCcC-CHHHHHHHHc-CCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccccc
Confidence 45999999999964 6778888874 999999999999999998865432111 0000 0 00011
Q ss_pred cCCCcCEEEEcCCCc--------ccHHHHHHHhccCCEEEEe
Q 018158 245 GKRTLDFILDTVSAK--------HSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 245 ~~~~~d~vid~~g~~--------~~~~~~~~~l~~~G~~v~~ 278 (360)
....+|+|++..... ..+..+.+.|+++|+++..
T Consensus 96 ~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~ 137 (201)
T d1pjza_ 96 DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI 137 (201)
T ss_dssp HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred cccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEE
Confidence 134689998855421 2357788999999987654
|
| >d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA1 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.12 E-value=0.001 Score=56.41 Aligned_cols=92 Identities=14% Similarity=0.162 Sum_probs=65.2
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCC-CeE-eeCccHHHHHhcCCCcCEEEEc-
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGA-DEF-ILSTNAMQMQAGKRTLDFILDT- 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~-~~~-v~~~~~~~~~~~~~~~d~vid~- 255 (360)
+++|++||=+|+|- |..++.+|+..|++|+++..+++..+.++++ .|. +.+ +...+ .......+|.++..
T Consensus 60 l~~G~~VLDiGCG~-G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d---~~~~~~~fD~i~si~ 135 (285)
T d1kpga_ 60 LQPGMTLLDVGCGW-GATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAG---WEQFDEPVDRIVSIG 135 (285)
T ss_dssp CCTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESC---GGGCCCCCSEEEEES
T ss_pred CCCCCEEEEecCcc-hHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhh---hhcccccccceeeeh
Confidence 56999999999963 6778889999999999999999988887664 231 211 11112 22335678987752
Q ss_pred ----CCCc---ccHHHHHHHhccCCEEEE
Q 018158 256 ----VSAK---HSLGPILELLKVNGTLSV 277 (360)
Q Consensus 256 ----~g~~---~~~~~~~~~l~~~G~~v~ 277 (360)
++.. ..++.+.++|+++|+++.
T Consensus 136 ~~eh~~~~~~~~~~~~~~r~LkpgG~~~l 164 (285)
T d1kpga_ 136 AFEHFGHERYDAFFSLAHRLLPADGVMLL 164 (285)
T ss_dssp CGGGTCTTTHHHHHHHHHHHSCTTCEEEE
T ss_pred hhhhcCchhHHHHHHHHHhhcCCCCcEEE
Confidence 2221 346788999999999875
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=97.11 E-value=0.0013 Score=54.01 Aligned_cols=95 Identities=13% Similarity=0.129 Sum_probs=65.6
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe-eCcc-HHHHHhcCCCcCEEEEcCCCc-
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI-LSTN-AMQMQAGKRTLDFILDTVSAK- 259 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~-~~~~~~~~~~~d~vid~~g~~- 259 (360)
+|+++||+|+ +++|.+.++.+...|++|++++++++.++ + .+...+. |-.+ .+...+.-+++|++++++|..
T Consensus 3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~---~-~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~~ 78 (234)
T d1o5ia_ 3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK---R-SGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGPK 78 (234)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---H-TCSEEEECCTTTCHHHHHHHSCCCSEEEECCCCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH---h-cCCcEEEcchHHHHHHHHHHhCCCcEEEecccccC
Confidence 6899999999 99999999999999999999999976544 3 5533222 2222 223333356799999998843
Q ss_pred ------------------------ccHHHHHHHhc--cCCEEEEeCCCC
Q 018158 260 ------------------------HSLGPILELLK--VNGTLSVVGAPE 282 (360)
Q Consensus 260 ------------------------~~~~~~~~~l~--~~G~~v~~g~~~ 282 (360)
...+.++..|+ ..|+++.++...
T Consensus 79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~ 127 (234)
T d1o5ia_ 79 AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFS 127 (234)
T ss_dssp CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred CcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccc
Confidence 11344555554 457888887543
|
| >d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein TM0748 species: Thermotoga maritima [TaxId: 2336]
Probab=97.06 E-value=0.00085 Score=56.23 Aligned_cols=95 Identities=20% Similarity=0.230 Sum_probs=67.3
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHH---cCC-CeE-eeCccHHHHHhcCCCcCEEEE
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFG--HHVTVISTSPSKEKEAKEL---LGA-DEF-ILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G--~~V~~~~~~~~~~~~~~~~---~g~-~~~-v~~~~~~~~~~~~~~~d~vid 254 (360)
++||++||=.|+|. |.+++.+|+..| .+|+.++.+++..+.++++ +|. +.+ +...+. ........+|.|+-
T Consensus 101 i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d~-~~~~~~~~~D~V~~ 178 (266)
T d1o54a_ 101 VKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDI-SEGFDEKDVDALFL 178 (266)
T ss_dssp CCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCG-GGCCSCCSEEEEEE
T ss_pred CCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEeccc-cccccccceeeeEe
Confidence 55999999999965 777888898875 5899999999988888765 343 222 122221 11111456888876
Q ss_pred cCCC-cccHHHHHHHhccCCEEEEe
Q 018158 255 TVSA-KHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 255 ~~g~-~~~~~~~~~~l~~~G~~v~~ 278 (360)
-... ...+..+.+.|++||+++.+
T Consensus 179 d~p~p~~~l~~~~~~LKpGG~lv~~ 203 (266)
T d1o54a_ 179 DVPDPWNYIDKCWEALKGGGRFATV 203 (266)
T ss_dssp CCSCGGGTHHHHHHHEEEEEEEEEE
T ss_pred cCCCHHHHHHHHHhhcCCCCEEEEE
Confidence 5554 35689999999999999876
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=97.05 E-value=0.0036 Score=48.36 Aligned_cols=91 Identities=21% Similarity=0.242 Sum_probs=66.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHcCC-CeEeeCccHHHHHhcCCCcCEEEEcCCCcc---
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKELLGA-DEFILSTNAMQMQAGKRTLDFILDTVSAKH--- 260 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~~g~-~~~v~~~~~~~~~~~~~~~d~vid~~g~~~--- 260 (360)
+|+|+|.|.+|...+..++..|. +|++++++++.++.+++ .|. +......+. ......|+++-|+....
T Consensus 3 ~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~-~~~~~~~~~~~~~----~~~~~~dlIila~p~~~~~~ 77 (171)
T d2g5ca2 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD-LGIIDEGTTSIAK----VEDFSPDFVMLSSPVRTFRE 77 (171)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH-TTSCSEEESCGGG----GGGTCCSEEEECSCHHHHHH
T ss_pred EEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHH-hhcchhhhhhhhh----hhccccccccccCCchhhhh
Confidence 68999999999999998998885 79999999999999999 774 433332221 12357899998887443
Q ss_pred cHHHHHHHhccCCEEEEeCCCC
Q 018158 261 SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 261 ~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.+..+...++++..+++++...
T Consensus 78 vl~~l~~~~~~~~ii~d~~s~k 99 (171)
T d2g5ca2 78 IAKKLSYILSEDATVTDQGSVK 99 (171)
T ss_dssp HHHHHHHHSCTTCEEEECCSCC
T ss_pred hhhhhhcccccccccccccccc
Confidence 2345556667777777776543
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.05 E-value=0.0012 Score=53.75 Aligned_cols=97 Identities=21% Similarity=0.236 Sum_probs=62.2
Q ss_pred CCCCcEEEEEcCChHHHHHHH---HHHHcC----CeEEEEeCChhHHHHHHHHc--------CCCeEe-eCccHHHHHhc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVK---FGKAFG----HHVTVISTSPSKEKEAKELL--------GADEFI-LSTNAMQMQAG 245 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiq---la~~~G----~~V~~~~~~~~~~~~~~~~~--------g~~~~v-~~~~~~~~~~~ 245 (360)
++++++||.+|+|. |..++. ++...| .+|+.++.+++-.+.+++.+ +...+. ...+.......
T Consensus 78 l~~g~~VLeIGtGs-GY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~~~ 156 (223)
T d1r18a_ 78 LKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP 156 (223)
T ss_dssp CCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG
T ss_pred cCCCCeEEEecCCC-CHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccccccc
Confidence 44999999998842 444444 444444 37999999988666665432 211221 11121111112
Q ss_pred CCCcCEEEEcCCCcccHHHHHHHhccCCEEEE-eC
Q 018158 246 KRTLDFILDTVSAKHSLGPILELLKVNGTLSV-VG 279 (360)
Q Consensus 246 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~-~g 279 (360)
...||.|+-+.+........++.|++||+++. +|
T Consensus 157 ~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~pvg 191 (223)
T d1r18a_ 157 NAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVG 191 (223)
T ss_dssp GCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEES
T ss_pred ccceeeEEEEeechhchHHHHHhcCCCcEEEEEEe
Confidence 45799999887776666889999999999987 44
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=97.03 E-value=0.0014 Score=54.51 Aligned_cols=94 Identities=17% Similarity=0.199 Sum_probs=63.9
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCC-eEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGAD-EFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~-~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
++|++||=+|+|. |..++.+++ .|++|++++.+++..+.++++ .|.. .++.....+. .....+|+|+.....
T Consensus 119 ~~g~~VLDiGcGs-G~l~i~aa~-~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~~--~~~~~fD~V~ani~~ 194 (254)
T d2nxca1 119 RPGDKVLDLGTGS-GVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA--LPFGPFDLLVANLYA 194 (254)
T ss_dssp CTTCEEEEETCTT-SHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH--GGGCCEEEEEEECCH
T ss_pred CccCEEEEcccch-hHHHHHHHh-cCCEEEEEECChHHHHHHHHHHHHcCCceeEEecccccc--ccccccchhhhcccc
Confidence 4999999999964 666666554 689999999999987777653 3433 3333222211 124689999865432
Q ss_pred c---ccHHHHHHHhccCCEEEEeCC
Q 018158 259 K---HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 259 ~---~~~~~~~~~l~~~G~~v~~g~ 280 (360)
. ..++.+.+.|++||+++..|.
T Consensus 195 ~~l~~l~~~~~~~LkpGG~lilSgi 219 (254)
T d2nxca1 195 ELHAALAPRYREALVPGGRALLTGI 219 (254)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccHHHHHHHHHHhcCCCcEEEEEec
Confidence 2 234678889999999987653
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=97.00 E-value=0.0034 Score=51.73 Aligned_cols=96 Identities=15% Similarity=0.182 Sum_probs=64.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHH---cCCCeE---eeCccHHHHHh-------cCCCcCE
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFGHHVTVIS-TSPSKEKEAKEL---LGADEF---ILSTNAMQMQA-------GKRTLDF 251 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~-~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~-------~~~~~d~ 251 (360)
.+||+|+ +++|.+.++.+...|++|++.+ ++++..+.+++. +|.+.. .|-.+.+.... .-.++|+
T Consensus 3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 82 (244)
T d1edoa_ 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV 82 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence 5788899 9999999999999999998865 566655554432 453221 24444433322 1468999
Q ss_pred EEEcCCCc-------------------------ccHHHHHHHh--ccCCEEEEeCCCC
Q 018158 252 ILDTVSAK-------------------------HSLGPILELL--KVNGTLSVVGAPE 282 (360)
Q Consensus 252 vid~~g~~-------------------------~~~~~~~~~l--~~~G~~v~~g~~~ 282 (360)
+++++|.. ...+.++..| +.+|+|+.++...
T Consensus 83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~ 140 (244)
T d1edoa_ 83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVV 140 (244)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTH
T ss_pred cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChh
Confidence 99999842 1235566666 3579999998654
|
| >d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical Protein YjhP domain: Hypothetical Protein YjhP species: Escherichia coli [TaxId: 562]
Probab=96.99 E-value=0.00079 Score=55.72 Aligned_cols=102 Identities=19% Similarity=0.163 Sum_probs=67.6
Q ss_pred hhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCe-E-eeCccHHHHHhcCC
Q 018158 173 PMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADE-F-ILSTNAMQMQAGKR 247 (360)
Q Consensus 173 ~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~-~-v~~~~~~~~~~~~~ 247 (360)
.+..... ++||++||=+|+|. |..+..+++..|++|++++.+++..+.+++. .|... + +...+.... ...+
T Consensus 24 ~l~~~~~--l~pg~~VLDiGCG~-G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~-~~~~ 99 (245)
T d1nkva_ 24 TLGRVLR--MKPGTRILDLGSGS-GEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY-VANE 99 (245)
T ss_dssp HHHHHTC--CCTTCEEEEETCTT-CHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC-CCSS
T ss_pred HHHHHcC--CCCCCEEEEEcCCC-CHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhc-cccC
Confidence 3434444 44999999999854 5667778888899999999999877666553 45321 1 111222111 2356
Q ss_pred CcCEEEEcCC------CcccHHHHHHHhccCCEEEEe
Q 018158 248 TLDFILDTVS------AKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 248 ~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~ 278 (360)
.+|+|+..-. -...+..+.+.|++||+++..
T Consensus 100 ~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~ 136 (245)
T d1nkva_ 100 KCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIG 136 (245)
T ss_dssp CEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEE
T ss_pred ceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEE
Confidence 7999985432 234578888999999999765
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.93 E-value=0.00039 Score=54.63 Aligned_cols=75 Identities=13% Similarity=0.155 Sum_probs=50.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC---eEeeCccHHHHHhcCCCcCEEEEcCCCc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD---EFILSTNAMQMQAGKRTLDFILDTVSAK 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~~~~~~d~vid~~g~~ 259 (360)
++++|+|+|+|+++.+++..+...| +|+++.|+.++.+.+.+.+... ......+..........+|++++|+...
T Consensus 17 ~~k~vlIlGaGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dliIn~tp~g 94 (177)
T d1nvta1 17 KDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPIG 94 (177)
T ss_dssp CSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCTT
T ss_pred CCCEEEEECCcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhhccchhhhhccCCccc
Confidence 7899999999999998888776666 8999999999887776544310 0000000011112245789999998743
|
| >d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Probable methyltransferase Rv2118c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.91 E-value=0.0021 Score=53.54 Aligned_cols=97 Identities=18% Similarity=0.235 Sum_probs=67.8
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHcC------CCeE-eeCccHHHHHhcCCCcCEE
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKELLG------ADEF-ILSTNAMQMQAGKRTLDFI 252 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~~g------~~~~-v~~~~~~~~~~~~~~~d~v 252 (360)
++||++||=.|+|. |.+++.+|+..|. +|+.++.+++..+.+++++- .+.+ +...+..........+|.|
T Consensus 94 i~PG~~VLE~G~Gs-G~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d~~~~~~~~~~fDaV 172 (264)
T d1i9ga_ 94 IFPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRA 172 (264)
T ss_dssp CCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEE
T ss_pred CCCCCEEEecCcCC-cHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEecccccccccCCCcceE
Confidence 55999999998864 7888899998875 79999999999888876421 2222 2222221111124679988
Q ss_pred EEcCCC-cccHHHHHHHhccCCEEEEeC
Q 018158 253 LDTVSA-KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 253 id~~g~-~~~~~~~~~~l~~~G~~v~~g 279 (360)
|--... ...+..+.+.|++||+++.+-
T Consensus 173 ~ldlp~P~~~l~~~~~~LkpGG~lv~~~ 200 (264)
T d1i9ga_ 173 VLDMLAPWEVLDAVSRLLVAGGVLMVYV 200 (264)
T ss_dssp EEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred EEecCCHHHHHHHHHhccCCCCEEEEEe
Confidence 754444 356789999999999998763
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.89 E-value=0.0012 Score=54.90 Aligned_cols=74 Identities=14% Similarity=0.164 Sum_probs=52.9
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHcCCCe-E--eeCccHHHHHhc---------CCCc
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKELLGADE-F--ILSTNAMQMQAG---------KRTL 249 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~~g~~~-~--v~~~~~~~~~~~---------~~~~ 249 (360)
.++|||+|+ +++|.++++.+...|+ +|+.++|+.++++.+++..+... + .|-.+.+..... ..+.
T Consensus 3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i 82 (250)
T d1yo6a1 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL 82 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence 488999999 9999998888777786 69999999999888877333321 1 244443222111 2469
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
|++++++|.
T Consensus 83 dilinnAG~ 91 (250)
T d1yo6a1 83 SLLINNAGV 91 (250)
T ss_dssp CEEEECCCC
T ss_pred EEEEEcCcc
Confidence 999999984
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.85 E-value=0.0015 Score=52.96 Aligned_cols=93 Identities=18% Similarity=0.295 Sum_probs=63.2
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC-eEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD-EFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
+++.+||-+|+|. |..+..+++. |.+|++++.+++..+.+++++ +.. ..+.. +..........+|+|+....-
T Consensus 36 ~~~~~ILDiGcG~-G~~~~~la~~-~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~-d~~~l~~~~~~fD~I~~~~~l 112 (226)
T d1ve3a1 36 KKRGKVLDLACGV-GGFSFLLEDY-GFEVVGVDISEDMIRKAREYAKSRESNVEFIVG-DARKLSFEDKTFDYVIFIDSI 112 (226)
T ss_dssp CSCCEEEEETCTT-SHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEEC-CTTSCCSCTTCEEEEEEESCG
T ss_pred CCCCEEEEECCCc-chhhhhHhhh-hcccccccccccchhhhhhhhcccccccccccc-ccccccccCcCceEEEEecch
Confidence 3888999999965 7777888864 889999999999888877643 322 22221 111111124679999865431
Q ss_pred c--------ccHHHHHHHhccCCEEEEe
Q 018158 259 K--------HSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 259 ~--------~~~~~~~~~l~~~G~~v~~ 278 (360)
. ..+..+.+.|++||+++..
T Consensus 113 ~~~~~~d~~~~l~~i~~~LkpgG~lii~ 140 (226)
T d1ve3a1 113 VHFEPLELNQVFKEVRRVLKPSGKFIMY 140 (226)
T ss_dssp GGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence 1 2467889999999998654
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.85 E-value=0.0013 Score=53.71 Aligned_cols=96 Identities=14% Similarity=-0.043 Sum_probs=65.8
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEe----------------------eCccHH
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFI----------------------LSTNAM 240 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v----------------------~~~~~~ 240 (360)
.++.+||..|+|. |..+..+|+ .|++|++++.+++..+.++++.+..... ..+-..
T Consensus 44 ~~~~rvLd~GCG~-G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 121 (229)
T d2bzga1 44 KSGLRVFFPLCGK-AVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD 121 (229)
T ss_dssp CCSCEEEETTCTT-CTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred CCCCEEEEeCCCC-cHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence 3889999999975 777778876 5999999999999999888865532111 000001
Q ss_pred HHHhcCCCcCEEEEcCCCc--------ccHHHHHHHhccCCEEEEeCC
Q 018158 241 QMQAGKRTLDFILDTVSAK--------HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 241 ~~~~~~~~~d~vid~~g~~--------~~~~~~~~~l~~~G~~v~~g~ 280 (360)
........+|+|+++..-. ..+..+.++|+++|+++....
T Consensus 122 l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~ 169 (229)
T d2bzga1 122 LPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCVL 169 (229)
T ss_dssp GGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEEc
Confidence 1112245689999876421 235788999999999876643
|
| >d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Putative sarcosine dimethylglycine methyltransferase species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Probab=96.83 E-value=0.0017 Score=54.81 Aligned_cols=97 Identities=16% Similarity=0.280 Sum_probs=66.1
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCC-eE-eeCccHHHHHhcCCCcCEEEEcC
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGAD-EF-ILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~-~~-v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
++++.+||=+|+| .|..+..+++..|++|++++.++...+.++++ .|.. .+ +...+.....-....+|+|+..-
T Consensus 65 l~~~~~vLDiGcG-~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~~~~~sfD~V~~~~ 143 (282)
T d2o57a1 65 LQRQAKGLDLGAG-YGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQD 143 (282)
T ss_dssp CCTTCEEEEETCT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred CCCCCEEEEeCCC-CcHHHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccccccccccccchhhccc
Confidence 4499999999996 36677888888899999999999887776653 3422 11 21222212211246799998643
Q ss_pred CC------cccHHHHHHHhccCCEEEEeC
Q 018158 257 SA------KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 257 g~------~~~~~~~~~~l~~~G~~v~~g 279 (360)
.- ...+..+.+.|++||+++...
T Consensus 144 ~l~h~~d~~~~l~~~~~~LkpgG~l~~~~ 172 (282)
T d2o57a1 144 AFLHSPDKLKVFQECARVLKPRGVMAITD 172 (282)
T ss_dssp CGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhccCHHHHHHHHHHhcCCCcEEEEEE
Confidence 31 134789999999999988764
|
| >d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical methyltransferase TM1389 species: Thermotoga maritima [TaxId: 2336]
Probab=96.81 E-value=0.0012 Score=54.17 Aligned_cols=91 Identities=16% Similarity=0.222 Sum_probs=66.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCC-----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSA----- 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~----- 258 (360)
++.+||=+|+| .|..+..+++ .|++|++++.+++.++.+++ -+....+..... .+.-....+|+|+.....
T Consensus 42 ~~~~vLDiGcG-~G~~~~~l~~-~~~~v~giD~s~~~l~~a~~-~~~~~~~~~~~~-~l~~~~~~fD~ii~~~~~~~~~~ 117 (246)
T d2avna1 42 NPCRVLDLGGG-TGKWSLFLQE-RGFEVVLVDPSKEMLEVARE-KGVKNVVEAKAE-DLPFPSGAFEAVLALGDVLSYVE 117 (246)
T ss_dssp SCCEEEEETCT-TCHHHHHHHT-TTCEEEEEESCHHHHHHHHH-HTCSCEEECCTT-SCCSCTTCEEEEEECSSHHHHCS
T ss_pred CCCEEEEECCC-Cchhcccccc-cceEEEEeeccccccccccc-cccccccccccc-ccccccccccceeeecchhhhhh
Confidence 77889889997 5888888876 48999999999999999999 454444443222 222224679999865431
Q ss_pred --cccHHHHHHHhccCCEEEEe
Q 018158 259 --KHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 259 --~~~~~~~~~~l~~~G~~v~~ 278 (360)
...+..+.++|++||.++..
T Consensus 118 d~~~~l~~i~r~Lk~gG~~ii~ 139 (246)
T d2avna1 118 NKDKAFSEIRRVLVPDGLLIAT 139 (246)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEE
T ss_pred hHHHHHHHHHhhcCcCcEEEEE
Confidence 13467888999999988754
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=96.79 E-value=0.0094 Score=47.26 Aligned_cols=107 Identities=14% Similarity=0.101 Sum_probs=73.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
.|++|+|.|.|.+|..+++++...|++|++.+.+.++...... +|.+.+ ..++ .....+|+.+=|......-.
T Consensus 26 ~gk~v~IqG~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~-~g~~~~-~~~~-----~~~~~~DI~iPcA~~~~I~~ 98 (201)
T d1c1da1 26 DGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVA-LGHTAV-ALED-----VLSTPCDVFAPCAMGGVITT 98 (201)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCEEC-CGGG-----GGGCCCSEEEECSCSCCBCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHh-hccccc-Cccc-----cccccceeeecccccccccH
Confidence 6899999999999999999999999999999999999888887 776433 2222 13567899987776554445
Q ss_pred HHHHHhccCCEEEEeCCCCCCcccC-hh-hHhccCcEEE
Q 018158 264 PILELLKVNGTLSVVGAPEAPFELP-SF-PLIFGKRSVK 300 (360)
Q Consensus 264 ~~~~~l~~~G~~v~~g~~~~~~~~~-~~-~~~~~~~~i~ 300 (360)
...+.++- +++ ++.-..++... .. .+..+++.+.
T Consensus 99 ~~a~~i~a--k~i-~e~AN~p~~~~~~~~~L~~rgI~~i 134 (201)
T d1c1da1 99 EVARTLDC--SVV-AGAANNVIADEAASDILHARGILYA 134 (201)
T ss_dssp HHHHHCCC--SEE-CCSCTTCBCSHHHHHHHHHTTCEEC
T ss_pred HHHhhhhh--hee-eccCCCCcchhhHHHHhcccceEEE
Confidence 66666653 333 34333344333 22 3455666654
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=96.79 E-value=0.0019 Score=49.14 Aligned_cols=86 Identities=20% Similarity=0.280 Sum_probs=64.6
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHHHH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPIL 266 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~ 266 (360)
++.++|+|.+|.+.+.-+...|.++++.+++.++.+.+++++|....-+ . .+.-.+.|+||-|+- +..+..++
T Consensus 2 kIg~IG~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~~---~---~~~~~~~dvIilavk-p~~~~~vl 74 (152)
T d2ahra2 2 KIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMS---H---QDLIDQVDLVILGIK-PQLFETVL 74 (152)
T ss_dssp EEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSS---H---HHHHHTCSEEEECSC-GGGHHHHH
T ss_pred EEEEEeccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeech---h---hhhhhccceeeeecc-hHhHHHHh
Confidence 4778999999999888777779999999999999888877688653322 1 112347999999885 34567888
Q ss_pred HHhccCCEEEEeC
Q 018158 267 ELLKVNGTLSVVG 279 (360)
Q Consensus 267 ~~l~~~G~~v~~g 279 (360)
..++++..++++.
T Consensus 75 ~~l~~~~~iis~~ 87 (152)
T d2ahra2 75 KPLHFKQPIISMA 87 (152)
T ss_dssp TTSCCCSCEEECC
T ss_pred hhcccceeEeccc
Confidence 8888877776653
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.78 E-value=0.0021 Score=53.12 Aligned_cols=48 Identities=19% Similarity=0.171 Sum_probs=43.2
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD 231 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~ 231 (360)
+|+++||+|+ +++|.+.++.+...|++|++++++.++++.+.+.++..
T Consensus 4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~ 52 (248)
T d2o23a1 4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN 52 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC
Confidence 7999999999 99999999999999999999999999888877767743
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=96.78 E-value=0.0014 Score=53.75 Aligned_cols=95 Identities=19% Similarity=0.303 Sum_probs=64.2
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE-eeCccHHHHHhcCCCcCEEEEcCC
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF-ILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
+++|++||=+|+|. |..+..+++. +.+|++++.+++-++.++++ .|.+.+ +...+.....-....+|+|+..-.
T Consensus 14 ~~~~~rILDiGcGt-G~~~~~la~~-~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 91 (234)
T d1xxla_ 14 CRAEHRVLDIGAGA-GHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYA 91 (234)
T ss_dssp CCTTCEEEEESCTT-SHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESC
T ss_pred CCCCCEEEEeCCcC-cHHHHHHHHh-CCeEEEEeCChhhhhhhhhhhcccccccccccccccccccccccccceeeeece
Confidence 55999999999964 7777777774 78999999999887777654 232222 111111111112456999987554
Q ss_pred C------cccHHHHHHHhccCCEEEEe
Q 018158 258 A------KHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 258 ~------~~~~~~~~~~l~~~G~~v~~ 278 (360)
- ...++.+.+.|+++|+++..
T Consensus 92 l~~~~d~~~~l~~~~r~LkpgG~~~~~ 118 (234)
T d1xxla_ 92 AHHFSDVRKAVREVARVLKQDGRFLLV 118 (234)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred eecccCHHHHHHHHHHeeCCCcEEEEE
Confidence 2 13478999999999998775
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.77 E-value=0.0031 Score=51.35 Aligned_cols=96 Identities=19% Similarity=0.164 Sum_probs=67.6
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHcC---CCeEe--eCccHHHHHhcCCCcCEEEE
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKELLG---ADEFI--LSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~~g---~~~~v--~~~~~~~~~~~~~~~d~vid 254 (360)
++||++||=+|+|+ |..+..+++..|. +|++++.+++..+.++++.. ....+ +.............+|+++.
T Consensus 71 i~pG~~VLDlGaGs-G~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~vD~i~~ 149 (227)
T d1g8aa_ 71 IKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFE 149 (227)
T ss_dssp CCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred cCCCCEEEEeccCC-CHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcccccccccceEEEEE
Confidence 67999999999964 8888999999875 79999999998888877532 11122 22222222223457898886
Q ss_pred cCCCc----ccHHHHHHHhccCCEEEEe
Q 018158 255 TVSAK----HSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 255 ~~g~~----~~~~~~~~~l~~~G~~v~~ 278 (360)
..... ..+..+.+.|+++|+++..
T Consensus 150 d~~~~~~~~~~l~~~~~~LkpgG~lvi~ 177 (227)
T d1g8aa_ 150 DVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EccccchHHHHHHHHHHhcccCCeEEEE
Confidence 55432 2367888999999998764
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=96.76 E-value=0.0042 Score=47.10 Aligned_cols=82 Identities=15% Similarity=0.222 Sum_probs=55.7
Q ss_pred EEEEEcCChHHHHHHH-HHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHHH
Q 018158 187 RIGIVGLGGLGHVAVK-FGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPI 265 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiq-la~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 265 (360)
++.++|+|.+|.+.++ |++.-+.+|++.++++++++.+++++|....-+.. .-...|+||-|+- +..+..+
T Consensus 2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~-------~v~~~Div~lavk-P~~~~~v 73 (152)
T d1yqga2 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLP-------ELHSDDVLILAVK-PQDMEAA 73 (152)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCC-------CCCTTSEEEECSC-HHHHHHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccccccc-------cccccceEEEecC-HHHHHHh
Confidence 4788999999998777 45543478999999999999988867753222111 1245799998875 3335555
Q ss_pred HHHhccCCEEE
Q 018158 266 LELLKVNGTLS 276 (360)
Q Consensus 266 ~~~l~~~G~~v 276 (360)
.+-+++.++++
T Consensus 74 ~~~l~~~~~~v 84 (152)
T d1yqga2 74 CKNIRTNGALV 84 (152)
T ss_dssp HTTCCCTTCEE
T ss_pred HHHHhhcccEE
Confidence 55555554443
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=96.69 E-value=0.0067 Score=47.57 Aligned_cols=94 Identities=20% Similarity=0.188 Sum_probs=63.1
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCC-Ce--EeeCccHHHHHhcCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGA-DE--FILSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~-~~--~v~~~~~~~~~~~~~~~d~vid~ 255 (360)
+++|++||=+|+|. |..++.+|+. +.+|++++.+++..+.++++ +|. +. ++. .+..........+|.++..
T Consensus 31 ~~~g~~VLDiGcGs-G~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~-gda~~~~~~~~~~D~v~~~ 107 (186)
T d1l3ia_ 31 PGKNDVAVDVGCGT-GGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLME-GDAPEALCKIPDIDIAVVG 107 (186)
T ss_dssp CCTTCEEEEESCTT-SHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE-SCHHHHHTTSCCEEEEEES
T ss_pred CCCCCEEEEEECCe-Eccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEE-CchhhcccccCCcCEEEEe
Confidence 45999999998853 5556667765 56999999999987777664 453 22 232 2222222335679999865
Q ss_pred CCCc---ccHHHHHHHhccCCEEEEe
Q 018158 256 VSAK---HSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 256 ~g~~---~~~~~~~~~l~~~G~~v~~ 278 (360)
.+.. ..+..+.+.|+++|+++..
T Consensus 108 ~~~~~~~~~~~~~~~~LkpgG~lvi~ 133 (186)
T d1l3ia_ 108 GSGGELQEILRIIKDKLKPGGRIIVT 133 (186)
T ss_dssp CCTTCHHHHHHHHHHTEEEEEEEEEE
T ss_pred CccccchHHHHHHHHHhCcCCEEEEE
Confidence 4332 3467778889999998765
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=96.66 E-value=0.0021 Score=49.25 Aligned_cols=96 Identities=13% Similarity=0.059 Sum_probs=73.8
Q ss_pred ccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccH
Q 018158 161 APLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNA 239 (360)
Q Consensus 161 a~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~ 239 (360)
..+||+....+..|++...-- .|++++|+|. ..+|.-+..++...|++|+++......+...
T Consensus 15 ~~~PcTp~aI~~lL~~y~i~l--~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~--------------- 77 (166)
T d1b0aa1 15 RLRPCTPRGIVTLLERYNIDT--FGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHH--------------- 77 (166)
T ss_dssp SSCCHHHHHHHHHHHHTTCCC--TTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHH---------------
T ss_pred CCCCchHHHHHHHHHHcCccc--ccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHH---------------
Confidence 467888888788887776543 7999999999 8899999999999999999887654332221
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
.+..|+++.++|....+. -++++++..++++|..
T Consensus 78 ------~~~ADivI~a~G~p~~i~--~~~vk~g~vvIDvGi~ 111 (166)
T d1b0aa1 78 ------VENADLLIVAVGKPGFIP--GDWIKEGAIVIDVGIN 111 (166)
T ss_dssp ------HHHCSEEEECSCCTTCBC--TTTSCTTCEEEECCCE
T ss_pred ------HhhhhHhhhhccCccccc--ccccCCCcEEEecCce
Confidence 235789999999765443 2588899999999875
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.65 E-value=0.0029 Score=52.70 Aligned_cols=45 Identities=22% Similarity=0.228 Sum_probs=36.2
Q ss_pred CCcEEEEEcC-ChHHHHHHH-HHHH--cCCeEEEEeCChhHHHHHHHHc
Q 018158 184 AKKRIGIVGL-GGLGHVAVK-FGKA--FGHHVTVISTSPSKEKEAKELL 228 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiq-la~~--~G~~V~~~~~~~~~~~~~~~~~ 228 (360)
.|+.+||+|+ +++|.++++ ||+. .|++|++++|++++++.+.+.+
T Consensus 5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l 53 (259)
T d1oaaa_ 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEEL 53 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHH
Confidence 5788899999 999997665 5553 6999999999999887775543
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=96.64 E-value=0.0048 Score=48.10 Aligned_cols=35 Identities=31% Similarity=0.439 Sum_probs=32.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
.+++|+|+|+|+.|+.++..+...|.+|+++++.+
T Consensus 42 ~~k~V~IIGaGPAGL~AA~~la~~G~~Vtl~E~~~ 76 (179)
T d1ps9a3 42 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHS 76 (179)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCcEEEEECccHHHHHHHHHHHhhccceEEEeccC
Confidence 67899999999999999999999999999999764
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=96.63 E-value=0.0016 Score=53.11 Aligned_cols=94 Identities=21% Similarity=0.255 Sum_probs=64.1
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCe--EeeCccHHHHHhcCCCcCEEEEcC
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADE--FILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~--~v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
++++++||=+|+| .|..+..+++. |++|++++.+++..+.++++ .+... ++..+ .....-....+|+|+..-
T Consensus 13 l~~~~rVLDiGcG-~G~~~~~l~~~-~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d-~~~l~~~~~~fD~v~~~~ 89 (231)
T d1vl5a_ 13 LKGNEEVLDVATG-GGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGD-AEQMPFTDERFHIVTCRI 89 (231)
T ss_dssp CCSCCEEEEETCT-TCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECC-C-CCCSCTTCEEEEEEES
T ss_pred CCCcCEEEEeccc-CcHHHHHHHHh-CCEEEEEECCHHHHhhhhhcccccccccccccccc-cccccccccccccccccc
Confidence 5599999999996 47777777654 78999999999887777654 34322 22221 111111245799998654
Q ss_pred CC------cccHHHHHHHhccCCEEEEe
Q 018158 257 SA------KHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 257 g~------~~~~~~~~~~l~~~G~~v~~ 278 (360)
.- ...+..+.++|++||+++..
T Consensus 90 ~l~~~~d~~~~l~~~~r~LkpgG~l~i~ 117 (231)
T d1vl5a_ 90 AAHHFPNPASFVSEAYRVLKKGGQLLLV 117 (231)
T ss_dssp CGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccccCCHHHHHHHHHHhcCCCcEEEEE
Confidence 31 13478999999999999875
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=96.58 E-value=0.0097 Score=45.69 Aligned_cols=132 Identities=11% Similarity=0.099 Sum_probs=81.7
Q ss_pred EEEEEcCChHHHH-HHHHHHHc-CCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHH
Q 018158 187 RIGIVGLGGLGHV-AVKFGKAF-GHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGP 264 (360)
Q Consensus 187 ~vlI~Gag~vG~~-aiqla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~ 264 (360)
++.|+|+|.+|.- .+..++.. +.+++++++++++.+.+.++++...++. +.+.+. ...+|+|+-|+........
T Consensus 3 rvgiiG~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~--~~~~ll--~~~iD~V~I~tp~~~H~~~ 78 (167)
T d1xeaa1 3 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCT--DYRDVL--QYGVDAVMIHAATDVHSTL 78 (167)
T ss_dssp EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCS--STTGGG--GGCCSEEEECSCGGGHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccc--cHHHhc--ccccceecccccccccccc
Confidence 5789999999964 56666655 5578888899998888888788654432 221111 2469999999998878888
Q ss_pred HHHHhccCCEEEEeCCCCCCcccC---hhhH-hccCc-EEEEeecCCHHHHHHHHHHHhcCCCcc
Q 018158 265 ILELLKVNGTLSVVGAPEAPFELP---SFPL-IFGKR-SVKGSMTGGMRETQEMMNVCGKYNITC 324 (360)
Q Consensus 265 ~~~~l~~~G~~v~~g~~~~~~~~~---~~~~-~~~~~-~i~~~~~~~~~~~~~~~~~l~~~~l~~ 324 (360)
+..+++.|-. +.+-.+.....-. ...+ -.++. -..++ ......+.++.+.+..|++-.
T Consensus 79 ~~~al~~gk~-V~~EKP~~~~~~e~~~l~~~a~~~~~~~~vg~-~r~~~~~~~~~~~~~~G~ig~ 141 (167)
T d1xeaa1 79 AAFFLHLGIP-TFVDKPLAASAQECENLYELAEKHHQPLYVGF-NGFDAMVQDWLQVAAAGKLPT 141 (167)
T ss_dssp HHHHHHTTCC-EEEESCSCSSHHHHHHHHHHHHHTTCCEEEEC-GTHHHHHHHHHHHHHHTCCCH
T ss_pred cccccccccc-cccCCCCcCCHHHHHHHHHHHHHcCCEEEEEe-CcCCHHHHHHHHHhhcCCCCc
Confidence 8888887744 4553322111111 1111 11222 33343 222344677777778887753
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.54 E-value=0.05 Score=42.13 Aligned_cols=91 Identities=10% Similarity=0.060 Sum_probs=62.8
Q ss_pred EEEEEcCChHHHHHHHHHHHc-CCeEEE-EeCChhHHHHHHHHcCCC-eEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAF-GHHVTV-ISTSPSKEKEAKELLGAD-EFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~-G~~V~~-~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
++.|+|+|.+|...++.++.. +++|++ .+++.++.+.+.++++.. ..-.+.+.+.+-. ...+|+|+.++.....+.
T Consensus 3 ki~iIG~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~-~~~iD~v~I~tp~~~h~~ 81 (184)
T d1ydwa1 3 RIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLE-DPEIDALYVPLPTSLHVE 81 (184)
T ss_dssp EEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHH-CTTCCEEEECCCGGGHHH
T ss_pred EEEEEcCCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecCcHHHhhh-ccccceeeecccchhhcc
Confidence 578999999999888888776 567664 467777777766667732 1112233322222 457999999999888888
Q ss_pred HHHHHhccCCEEEEeC
Q 018158 264 PILELLKVNGTLSVVG 279 (360)
Q Consensus 264 ~~~~~l~~~G~~v~~g 279 (360)
.+..+++.+ .-+.+-
T Consensus 82 ~~~~~l~~g-~~v~~E 96 (184)
T d1ydwa1 82 WAIKAAEKG-KHILLE 96 (184)
T ss_dssp HHHHHHTTT-CEEEEC
T ss_pred hhhhhhhcc-ceeecc
Confidence 888888877 445553
|
| >d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Guanidinoacetate methyltransferase domain: Guanidinoacetate methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.52 E-value=0.0033 Score=51.29 Aligned_cols=94 Identities=20% Similarity=0.121 Sum_probs=64.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC--CeE-eeCccHHHH-Hhc-CCCcCEEE-EcCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA--DEF-ILSTNAMQM-QAG-KRTLDFIL-DTVS 257 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~--~~~-v~~~~~~~~-~~~-~~~~d~vi-d~~g 257 (360)
+|.+||-+|+|. |..+..+++..+.+|++++.+++.++.+++++.. ..+ +...+.... ... ...+|.++ |...
T Consensus 53 ~g~~VLdIGcG~-G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~fD~~~ 131 (229)
T d1zx0a1 53 KGGRVLEVGFGM-AIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 131 (229)
T ss_dssp TCEEEEEECCTT-SHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred CCCeEEEeeccc-hHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccccccccccccccccccccceeecccc
Confidence 889999999863 7778888887777899999999999998885431 111 112222222 122 46788884 6554
Q ss_pred Cc----------ccHHHHHHHhccCCEEEEe
Q 018158 258 AK----------HSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 258 ~~----------~~~~~~~~~l~~~G~~v~~ 278 (360)
.. ..+..+.+.|++||+++..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~ 162 (229)
T d1zx0a1 132 LSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 162 (229)
T ss_dssp CBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred cccccccccCHHHHHHHHHHHcCCCcEEEEE
Confidence 32 1356788999999999764
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=96.50 E-value=0.0046 Score=47.35 Aligned_cols=89 Identities=20% Similarity=0.240 Sum_probs=63.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHHH-
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPI- 265 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~- 265 (360)
+|-|+|.|.+|...+.-+...|.+|++.++++++.+.+++ .+.... . +. .+.....|++|-|+........+
T Consensus 2 kIgiIGlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~-~~~~~~-~--~~---~e~~~~~d~ii~~v~~~~~v~~v~ 74 (161)
T d1vpda2 2 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA-AGAETA-S--TA---KAIAEQCDVIITMLPNSPHVKEVA 74 (161)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCEEC-S--SH---HHHHHHCSEEEECCSSHHHHHHHH
T ss_pred EEEEEehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH-hhhhhc-c--cH---HHHHhCCCeEEEEcCCHHHHHHHH
Confidence 4778999999998888778889999999999999999988 665322 1 11 12234689999998766544443
Q ss_pred ------HHHhccCCEEEEeCCCC
Q 018158 266 ------LELLKVNGTLSVVGAPE 282 (360)
Q Consensus 266 ------~~~l~~~G~~v~~g~~~ 282 (360)
...++++..+++.+...
T Consensus 75 ~~~~~~~~~~~~g~iiid~sT~~ 97 (161)
T d1vpda2 75 LGENGIIEGAKPGTVLIDMSSIA 97 (161)
T ss_dssp HSTTCHHHHCCTTCEEEECSCCC
T ss_pred hCCcchhhccCCCCEEEECCCCC
Confidence 34455666666665443
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=96.49 E-value=0.038 Score=41.31 Aligned_cols=93 Identities=13% Similarity=0.262 Sum_probs=65.8
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHc--CCeEEEEe--CChhHHHHHHHHcCCCeEeeCccH--HHH----------------
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAF--GHHVTVIS--TSPSKEKEAKELLGADEFILSTNA--MQM---------------- 242 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~--G~~V~~~~--~~~~~~~~~~~~~g~~~~v~~~~~--~~~---------------- 242 (360)
+++.|+|+ |.+|.-+.++.+.. .++|+++. ++-+.+.....+|.+..++...+. ...
T Consensus 3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~~ 82 (150)
T d1r0ka2 3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGAD 82 (150)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESHH
T ss_pred cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCcc
Confidence 78999999 99999999999876 45766555 344444444444888777544332 111
Q ss_pred ---HhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEe
Q 018158 243 ---QAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 243 ---~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
......+|+++.+..+...+...+..++.+-++...
T Consensus 83 ~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaLA 121 (150)
T d1r0ka2 83 ALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALA 121 (150)
T ss_dssp HHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEEC
T ss_pred chheecccccceeeeecCchhHHHHHHHHHhcCCEEEEe
Confidence 111446999999988888899999999999776554
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.43 E-value=0.0047 Score=47.51 Aligned_cols=97 Identities=13% Similarity=0.065 Sum_probs=75.4
Q ss_pred cccccchhhhhhchhhccCCCCCCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCcc
Q 018158 160 AAPLLCAGITVFCPMKDNNLIDSPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTN 238 (360)
Q Consensus 160 aa~l~~~~~ta~~~l~~~~~~~~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~ 238 (360)
-+.+||+....+..|++.+.-- .|++++|+|. ..+|.-++.++...|++|+.+......+..
T Consensus 16 ~~~~PcTp~aii~lL~~~~i~l--~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~--------------- 78 (170)
T d1a4ia1 16 DCFIPCTPKGCLELIKETGVPI--AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDE--------------- 78 (170)
T ss_dssp SCCCCHHHHHHHHHHHTTTCCC--TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH---------------
T ss_pred CCCCCChHHHHHHHHHHhCccc--ccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHH---------------
Confidence 3577888888888888877544 7999999999 889999999999999999998865433221
Q ss_pred HHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCC
Q 018158 239 AMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 239 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
..+..|+++-++|....+. -++++++-.++++|..
T Consensus 79 ------~~~~aDivi~a~G~~~~i~--~~~vk~g~iviDvgi~ 113 (170)
T d1a4ia1 79 ------EVNKGDILVVATGQPEMVK--GEWIKPGAIVIDCGIN 113 (170)
T ss_dssp ------HHTTCSEEEECCCCTTCBC--GGGSCTTCEEEECCCB
T ss_pred ------HHhhccchhhccccccccc--cccccCCCeEeccCcc
Confidence 1346889999898765433 2588889888899864
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=96.42 E-value=0.0064 Score=50.81 Aligned_cols=75 Identities=16% Similarity=0.139 Sum_probs=50.7
Q ss_pred CCcEEEEEcC-C--hHHHHHHHHHHHcCCeEEEEeCChhH---HHHHHHHcCCCeE--eeCccHHHH-------HhcCCC
Q 018158 184 AKKRIGIVGL-G--GLGHVAVKFGKAFGHHVTVISTSPSK---EKEAKELLGADEF--ILSTNAMQM-------QAGKRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g--~vG~~aiqla~~~G~~V~~~~~~~~~---~~~~~~~~g~~~~--v~~~~~~~~-------~~~~~~ 248 (360)
+|+++||+|+ | ++|.++++.+...|++|++++++++. .+.+.+..+...+ .+..+.... ...-.+
T Consensus 4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~ 83 (274)
T d2pd4a1 4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS 83 (274)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCC
Confidence 6999999997 5 79999999999999999999998643 3333332332222 233332221 122567
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
+|+++++.|.
T Consensus 84 id~lV~nag~ 93 (274)
T d2pd4a1 84 LDFIVHSVAF 93 (274)
T ss_dssp EEEEEECCCC
T ss_pred CCeEEeeccc
Confidence 9999998873
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.29 E-value=0.017 Score=46.04 Aligned_cols=96 Identities=14% Similarity=0.149 Sum_probs=63.0
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHc---CCCeEeeC--ccHHHHHhcCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELL---GADEFILS--TNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~---g~~~~v~~--~~~~~~~~~~~~~d~vid~ 255 (360)
++||++||=+|+|+ |..+..+++..+ .+|++++.+++..+.++++. +....+.. ............+|+++..
T Consensus 54 lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd~v~~~ 132 (209)
T d1nt2a_ 54 LRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQD 132 (209)
T ss_dssp CCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccccccceEEEEEec
Confidence 66999999999954 667777787765 38999999998877776542 32222211 2211222223467887765
Q ss_pred CCCc----ccHHHHHHHhccCCEEEEe
Q 018158 256 VSAK----HSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 256 ~g~~----~~~~~~~~~l~~~G~~v~~ 278 (360)
.... ..+..+.+.|+++|+++..
T Consensus 133 ~~~~~~~~~~l~~~~~~LkpgG~l~i~ 159 (209)
T d1nt2a_ 133 IAQKNQIEILKANAEFFLKEKGEVVIM 159 (209)
T ss_dssp CCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccChhhHHHHHHHHHHHhccCCeEEEE
Confidence 4322 2367788999999999765
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=96.29 E-value=0.0077 Score=49.81 Aligned_cols=75 Identities=13% Similarity=0.152 Sum_probs=50.3
Q ss_pred CCcEEEEEcC-C--hHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeEe--eCccHHHH-------HhcCCC
Q 018158 184 AKKRIGIVGL-G--GLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEFI--LSTNAMQM-------QAGKRT 248 (360)
Q Consensus 184 ~~~~vlI~Ga-g--~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~v--~~~~~~~~-------~~~~~~ 248 (360)
.|+++||+|+ | ++|.+++..+...|++|++++++++..+.+.+. .+....+ +..+.... ......
T Consensus 4 ~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (258)
T d1qsga_ 4 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK 83 (258)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred CCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcccc
Confidence 7999999998 6 688999999999999999999987655544332 3433222 22222111 222567
Q ss_pred cCEEEEcCCC
Q 018158 249 LDFILDTVSA 258 (360)
Q Consensus 249 ~d~vid~~g~ 258 (360)
.|+.+++.+.
T Consensus 84 ~d~~v~~a~~ 93 (258)
T d1qsga_ 84 FDGFVHSIGF 93 (258)
T ss_dssp EEEEEECCCC
T ss_pred cceEEEeecc
Confidence 8999988763
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=96.29 E-value=0.0054 Score=51.04 Aligned_cols=74 Identities=14% Similarity=0.184 Sum_probs=51.4
Q ss_pred CCcEEEEEcC-C--hHHHHHHHHHHHcCCeEEEEeCChhHH-HHHHHHcCCCe---EeeCccHHHH-------Hh-c--C
Q 018158 184 AKKRIGIVGL-G--GLGHVAVKFGKAFGHHVTVISTSPSKE-KEAKELLGADE---FILSTNAMQM-------QA-G--K 246 (360)
Q Consensus 184 ~~~~vlI~Ga-g--~vG~~aiqla~~~G~~V~~~~~~~~~~-~~~~~~~g~~~---~v~~~~~~~~-------~~-~--~ 246 (360)
.|+++||+|+ | ++|.++++.+...|++|+.++++.++. +.+.++++... ..|-.+.+.. .. . .
T Consensus 5 ~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~ 84 (268)
T d2h7ma1 5 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG 84 (268)
T ss_dssp TTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccccC
Confidence 7899999995 4 599999999999999999999988775 44555466322 1233332111 11 1 3
Q ss_pred CCcCEEEEcCC
Q 018158 247 RTLDFILDTVS 257 (360)
Q Consensus 247 ~~~d~vid~~g 257 (360)
...|+++++.|
T Consensus 85 ~~ld~~i~~ag 95 (268)
T d2h7ma1 85 NKLDGVVHSIG 95 (268)
T ss_dssp CCEEEEEECCC
T ss_pred CCcceeeeccc
Confidence 56899999987
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.27 E-value=0.0098 Score=50.08 Aligned_cols=97 Identities=15% Similarity=0.117 Sum_probs=57.7
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEE---EEeCChhHHH---HHHHHcC---CCe---EeeCccHHHHHhc-----CC
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVT---VISTSPSKEK---EAKELLG---ADE---FILSTNAMQMQAG-----KR 247 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~---~~~~~~~~~~---~~~~~~g---~~~---~v~~~~~~~~~~~-----~~ 247 (360)
+.+||+|+ +++|.+++..+...|++|+ .+.++.++.+ ...+.+. ... ..|-.+.+..... .+
T Consensus 3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g 82 (285)
T d1jtva_ 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG 82 (285)
T ss_dssp EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence 44577899 9999999988888998744 4445444332 2222232 221 1244444333221 45
Q ss_pred CcCEEEEcCCCc-------------------------ccHHHHHHHhc--cCCEEEEeCCCC
Q 018158 248 TLDFILDTVSAK-------------------------HSLGPILELLK--VNGTLSVVGAPE 282 (360)
Q Consensus 248 ~~d~vid~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g~~~ 282 (360)
.+|+++++.|.. ...+.++..|+ .+|+++.+++..
T Consensus 83 ~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~ 144 (285)
T d1jtva_ 83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVG 144 (285)
T ss_dssp CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGG
T ss_pred chhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechh
Confidence 799999988743 11344555564 368999987654
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.27 E-value=0.0046 Score=50.05 Aligned_cols=71 Identities=20% Similarity=0.142 Sum_probs=50.1
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
.+|||+|+ |.+|..++..+...|. +|+.+.|++++...+.. +.+.+ .|..+.......-+++|+|+.+.+.
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~ 78 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG--EADVFIGDITDADSINPAFQGIDALVILTSA 78 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC--CTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC--CcEEEEeeeccccccccccccceeeEEEEee
Confidence 58999999 9999999999998886 47777788766554322 22322 3445555555556789999998763
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=96.25 E-value=0.0048 Score=48.92 Aligned_cols=87 Identities=20% Similarity=0.223 Sum_probs=61.8
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCc----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAK---- 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~---- 259 (360)
.|++|.|+|.|.+|...+++++.+|++|++.++....... . .+. ...+. .+.-...|+++.++...
T Consensus 42 ~gk~vgIiG~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~--~-~~~----~~~~l---~~~l~~sDii~~~~plt~~T~ 111 (197)
T d1j4aa1 42 RDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPELE--K-KGY----YVDSL---DDLYKQADVISLHVPDVPANV 111 (197)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH--H-TTC----BCSCH---HHHHHHCSEEEECSCCCGGGT
T ss_pred cCCeEEEecccccchhHHHhHhhhcccccccCcccccccc--c-cee----eeccc---cccccccccccccCCcccccc
Confidence 5899999999999999999999999999999976543221 1 221 11122 22234589998877532
Q ss_pred -ccHHHHHHHhccCCEEEEeCC
Q 018158 260 -HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 260 -~~~~~~~~~l~~~G~~v~~g~ 280 (360)
..-.+.++.|+++..++.++.
T Consensus 112 ~li~~~~l~~mk~~a~lIN~sR 133 (197)
T d1j4aa1 112 HMINDESIAKMKQDVVIVNVSR 133 (197)
T ss_dssp TCBSHHHHHHSCTTEEEEECSC
T ss_pred ccccHHHHhhhCCccEEEecCc
Confidence 123677899999989988864
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.24 E-value=0.014 Score=44.48 Aligned_cols=89 Identities=15% Similarity=0.149 Sum_probs=60.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHHH-
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPI- 265 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~- 265 (360)
+|-++|.|.+|...+.-+...|++|++.++++++.+.+.+ .+....-+ ..+.....|+++.|+........+
T Consensus 3 kIg~IGlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~-~~~~~~~~------~~e~~~~~diii~~v~~~~~~~~v~ 75 (162)
T d3cuma2 3 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVA-AGASAARS------ARDAVQGADVVISMLPASQHVEGLY 75 (162)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHH-TTCEECSS------HHHHHTSCSEEEECCSCHHHHHHHH
T ss_pred EEEEEEEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhh-hhccccch------hhhhccccCeeeecccchhhHHHHH
Confidence 5888999999998888777789999999999999888887 66432211 122345678888877765443333
Q ss_pred ------HHHhccCCEEEEeCCCC
Q 018158 266 ------LELLKVNGTLSVVGAPE 282 (360)
Q Consensus 266 ------~~~l~~~G~~v~~g~~~ 282 (360)
...+.++..+++.+...
T Consensus 76 ~~~~~~~~~l~~g~iiid~st~~ 98 (162)
T d3cuma2 76 LDDDGLLAHIAPGTLVLECSTIA 98 (162)
T ss_dssp HSTTCHHHHSCTTCEEEECSCCC
T ss_pred hccccccccCCCCCEEEECCCCC
Confidence 33345555666665443
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.17 E-value=0.011 Score=48.51 Aligned_cols=91 Identities=16% Similarity=0.207 Sum_probs=63.5
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC-eEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD-EFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
+++++||=+|+|. |..+..+++ .|++|++++.+++-++.+++++ +.. .++.. +...+. ..+.+|+|+...+.
T Consensus 40 ~~~~~iLDiGcGt-G~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~-d~~~l~-~~~~fD~I~~~~~~ 115 (251)
T d1wzna1 40 REVRRVLDLACGT-GIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQG-DVLEIA-FKNEFDAVTMFFST 115 (251)
T ss_dssp SCCCEEEEETCTT-CHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEES-CGGGCC-CCSCEEEEEECSSG
T ss_pred CCCCEEEEeCCCC-Cccchhhcc-cceEEEEEeeccccccccccccccccccchheeh-hhhhcc-cccccchHhhhhhh
Confidence 3778999999975 777777776 5899999999999888887753 322 22222 222221 24679999875432
Q ss_pred c---------ccHHHHHHHhccCCEEEE
Q 018158 259 K---------HSLGPILELLKVNGTLSV 277 (360)
Q Consensus 259 ~---------~~~~~~~~~l~~~G~~v~ 277 (360)
- ..++.+.++|++||.++.
T Consensus 116 ~~~~~~~~~~~~L~~~~~~LkpgG~lii 143 (251)
T d1wzna1 116 IMYFDEEDLRKLFSKVAEALKPGGVFIT 143 (251)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence 1 246789999999998875
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.16 E-value=0.0055 Score=48.06 Aligned_cols=89 Identities=21% Similarity=0.244 Sum_probs=63.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc---
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH--- 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~--- 260 (360)
.++++.|+|.|.+|...+++++..|++|++.++...+... .. .+.. . .+ ..+.-+..|+|..+.....
T Consensus 43 ~~k~vgiiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~-~~-~~~~-~---~~---l~ell~~sDiv~~~~Plt~~T~ 113 (184)
T d1ygya1 43 FGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARA-AQ-LGIE-L---LS---LDDLLARADFISVHLPKTPETA 113 (184)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCHHHH-HH-HTCE-E---CC---HHHHHHHCSEEEECCCCSTTTT
T ss_pred cceeeeeccccchhHHHHHHhhhccceEEeecCCCChhHH-hh-cCce-e---cc---HHHHHhhCCEEEEcCCCCchhh
Confidence 6889999999999999999999999999999977654333 22 3322 1 11 1223346899988765221
Q ss_pred --cHHHHHHHhccCCEEEEeCCC
Q 018158 261 --SLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 261 --~~~~~~~~l~~~G~~v~~g~~ 281 (360)
.-.+.++.|+++..++.++.-
T Consensus 114 ~lin~~~l~~mk~~a~lIN~sRG 136 (184)
T d1ygya1 114 GLIDKEALAKTKPGVIIVNAARG 136 (184)
T ss_dssp TCBCHHHHTTSCTTEEEEECSCT
T ss_pred hhhhHHHHhhhCCCceEEEecch
Confidence 235888999999899888753
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=96.15 E-value=0.1 Score=38.86 Aligned_cols=74 Identities=23% Similarity=0.231 Sum_probs=51.4
Q ss_pred cEEEEEc-CChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHh-------cCCCcCEEEEcCC
Q 018158 186 KRIGIVG-LGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQA-------GKRTLDFILDTVS 257 (360)
Q Consensus 186 ~~vlI~G-ag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~-------~~~~~d~vid~~g 257 (360)
++|.|+| .|.+|...+..++..|++|.+.+++.+....... .+++.++.......... ....=.+++|+.+
T Consensus 10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD~~S 88 (152)
T d2pv7a2 10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL-ANADVVIVSVPINLTLETIERLKPYLTENMLLADLTS 88 (152)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH-TTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECCS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh-hhccccccccchhhheeeeecccccccCCceEEEecc
Confidence 6799999 5999999999999999999999998776555554 56666655444322111 1233357778776
Q ss_pred Ccc
Q 018158 258 AKH 260 (360)
Q Consensus 258 ~~~ 260 (360)
...
T Consensus 89 vk~ 91 (152)
T d2pv7a2 89 VKR 91 (152)
T ss_dssp CCH
T ss_pred cCH
Confidence 543
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=96.14 E-value=0.016 Score=47.85 Aligned_cols=76 Identities=18% Similarity=0.225 Sum_probs=50.2
Q ss_pred CCCCcEEEEEcC-ChHHHHHHHHHHHcCC-eEEEEeCChhH-------HHHHHHHcCCCeE---eeCccHHHHHhc----
Q 018158 182 SPAKKRIGIVGL-GGLGHVAVKFGKAFGH-HVTVISTSPSK-------EKEAKELLGADEF---ILSTNAMQMQAG---- 245 (360)
Q Consensus 182 ~~~~~~vlI~Ga-g~vG~~aiqla~~~G~-~V~~~~~~~~~-------~~~~~~~~g~~~~---v~~~~~~~~~~~---- 245 (360)
++|+.++||+|+ |++|++.++.+-..|+ +|+++.|+..+ .+.+.+ .|..-. .|-.+.+.....
T Consensus 6 ~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~-~g~~v~~~~~Dv~d~~~~~~~~~~i 84 (259)
T d2fr1a1 6 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEA-LGARTTVAACDVTDRESVRELLGGI 84 (259)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred cCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHh-ccccccccccccchHHHHHHhhccc
Confidence 569999999999 9999999988888899 57878776322 223333 564322 244443333222
Q ss_pred --CCCcCEEEEcCCC
Q 018158 246 --KRTLDFILDTVSA 258 (360)
Q Consensus 246 --~~~~d~vid~~g~ 258 (360)
....|.++++.|.
T Consensus 85 ~~~~~i~~vv~~ag~ 99 (259)
T d2fr1a1 85 GDDVPLSAVFHAAAT 99 (259)
T ss_dssp CTTSCEEEEEECCCC
T ss_pred ccccccccccccccc
Confidence 2368889998883
|
| >d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein FLJ20628 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.13 E-value=0.0048 Score=52.99 Aligned_cols=97 Identities=18% Similarity=0.171 Sum_probs=63.7
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHcC--------------CCeE-eeCccHHH-H-
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKELLG--------------ADEF-ILSTNAMQ-M- 242 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~~g--------------~~~~-v~~~~~~~-~- 242 (360)
++||++||=.|+|. |.+++.+|+..|. +|+.++.+++..+.+++++- .+.+ +...+... .
T Consensus 96 i~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~di~~~~~ 174 (324)
T d2b25a1 96 INPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATE 174 (324)
T ss_dssp CCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-
T ss_pred CCCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecchhhccc
Confidence 55999999999865 8889999998875 79999999998888776431 1111 11111100 0
Q ss_pred HhcCCCcCEEEEcCCC-cccHHHHHHHhccCCEEEEeC
Q 018158 243 QAGKRTLDFILDTVSA-KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 243 ~~~~~~~d~vid~~g~-~~~~~~~~~~l~~~G~~v~~g 279 (360)
......+|.||--... ...+..+.+.|++||+++.+-
T Consensus 175 ~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~ 212 (324)
T d2b25a1 175 DIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV 212 (324)
T ss_dssp ------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred ccCCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEe
Confidence 1113458888733332 246789999999999998874
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=95.98 E-value=0.0033 Score=51.96 Aligned_cols=73 Identities=21% Similarity=0.176 Sum_probs=47.9
Q ss_pred cEEEEEcC-ChHHHHHHHHHH---HcCCeEEEEeCChhHHHHHHHH--cCCCeE---eeCccHHHH----H---h--cCC
Q 018158 186 KRIGIVGL-GGLGHVAVKFGK---AFGHHVTVISTSPSKEKEAKEL--LGADEF---ILSTNAMQM----Q---A--GKR 247 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~---~~G~~V~~~~~~~~~~~~~~~~--~g~~~~---v~~~~~~~~----~---~--~~~ 247 (360)
++|||+|+ +++|.++++.+. ..|++|++++|++++.+.+++. .+.... .|..+.+.. . . ...
T Consensus 3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~ 82 (248)
T d1snya_ 3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ 82 (248)
T ss_dssp SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence 57999999 999998876553 3588999999998876655431 222211 233333222 1 1 135
Q ss_pred CcCEEEEcCCC
Q 018158 248 TLDFILDTVSA 258 (360)
Q Consensus 248 ~~d~vid~~g~ 258 (360)
++|+++++.|.
T Consensus 83 ~iDiLvnNAg~ 93 (248)
T d1snya_ 83 GLNVLFNNAGI 93 (248)
T ss_dssp CCSEEEECCCC
T ss_pred CcceEEeeccc
Confidence 79999999873
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=95.95 E-value=0.007 Score=52.32 Aligned_cols=77 Identities=13% Similarity=0.001 Sum_probs=54.0
Q ss_pred CCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc----CCC--eEe--eCccHHHHHhcCCCcCEE
Q 018158 182 SPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL----GAD--EFI--LSTNAMQMQAGKRTLDFI 252 (360)
Q Consensus 182 ~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~----g~~--~~v--~~~~~~~~~~~~~~~d~v 252 (360)
..+|++|||+|+ |-+|..+++.+...|++|+++.|+.++...+++.. ... ..+ |-.+...+...-.++|.+
T Consensus 8 ~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v 87 (342)
T d1y1pa1 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhh
Confidence 348999999999 99999998888888999999999887766654411 111 112 222333334445789999
Q ss_pred EEcCCC
Q 018158 253 LDTVSA 258 (360)
Q Consensus 253 id~~g~ 258 (360)
+.+.+.
T Consensus 88 ~~~a~~ 93 (342)
T d1y1pa1 88 AHIASV 93 (342)
T ss_dssp EECCCC
T ss_pred hhhccc
Confidence 987764
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=95.95 E-value=0.054 Score=41.65 Aligned_cols=96 Identities=18% Similarity=0.204 Sum_probs=65.5
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC--eEeeCccHHHHHhcCCCcCEEEEcCCCccc--
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD--EFILSTNAMQMQAGKRTLDFILDTVSAKHS-- 261 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~~~~~~~~~~d~vid~~g~~~~-- 261 (360)
..|-|+|.|.+|...+.-+...|.+|++.++++++.+.+.+ .++. ........+...+.....|.++.++.....
T Consensus 3 ~nIg~IGlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~-~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~ 81 (176)
T d2pgda2 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLA-NEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD 81 (176)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHH-TTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred CcEEEEeEhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-hccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence 45789999999998888888889999999999999998887 4432 111122333344446677888877765432
Q ss_pred --HHHHHHHhccCCEEEEeCCCC
Q 018158 262 --LGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 262 --~~~~~~~l~~~G~~v~~g~~~ 282 (360)
...+...++++..+++.+...
T Consensus 82 ~v~~~l~~~~~~g~iiid~sT~~ 104 (176)
T d2pgda2 82 NFIEKLVPLLDIGDIIIDGGNSE 104 (176)
T ss_dssp HHHHHHHHHCCTTCEEEECSCCC
T ss_pred HHHHHHHhccccCcEEEecCcch
Confidence 344555666676777775443
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=95.94 E-value=0.0075 Score=47.08 Aligned_cols=84 Identities=20% Similarity=0.292 Sum_probs=62.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCc----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAK---- 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~---- 259 (360)
.|+++.|+|.|.+|...+++++.+|++|++.+++... +.....+ ...+.-+..|+|+.++...
T Consensus 41 ~gk~vgIiG~G~IG~~va~~l~~~g~~v~~~d~~~~~--------~~~~~~~-----~l~ell~~sDiv~~~~pl~~~t~ 107 (181)
T d1qp8a1 41 QGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPKE--------GPWRFTN-----SLEEALREARAAVCALPLNKHTR 107 (181)
T ss_dssp TTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCCC--------SSSCCBS-----CSHHHHTTCSEEEECCCCSTTTT
T ss_pred cCceEEEeccccccccceeeeeccccccccccccccc--------cceeeee-----chhhhhhccchhhcccccccccc
Confidence 5899999999999999999999999999999987531 1111111 2234457889999877532
Q ss_pred -ccHHHHHHHhccCCEEEEeCC
Q 018158 260 -HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 260 -~~~~~~~~~l~~~G~~v~~g~ 280 (360)
..-.+.++.|+++..++.++.
T Consensus 108 ~li~~~~l~~mk~~ailIN~~R 129 (181)
T d1qp8a1 108 GLVKYQHLALMAEDAVFVNVGR 129 (181)
T ss_dssp TCBCHHHHTTSCTTCEEEECSC
T ss_pred cccccceeeeccccceEEeccc
Confidence 122688899999999999874
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=95.94 E-value=0.0056 Score=48.36 Aligned_cols=90 Identities=19% Similarity=0.201 Sum_probs=61.8
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCc----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAK---- 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~---- 259 (360)
.|+++.|+|.|.+|...+++++.+|++|++.++...... ... .+...+ .+. .+.-+..|+|.-+....
T Consensus 48 ~gktvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~-~~~-~~~~~~---~~l---~~ll~~sD~i~~~~plt~~T~ 119 (193)
T d1mx3a1 48 RGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGV-ERA-LGLQRV---STL---QDLLFHSDCVTLHCGLNEHNH 119 (193)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTH-HHH-HTCEEC---SSH---HHHHHHCSEEEECCCCCTTCT
T ss_pred eCceEEEeccccccccceeeeeccccceeeccCcccccc-hhh-hccccc---cch---hhccccCCEEEEeecccccch
Confidence 689999999999999999999999999999997654322 222 332211 111 22234578887766522
Q ss_pred -ccHHHHHHHhccCCEEEEeCCC
Q 018158 260 -HSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 260 -~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
..-...+..|+++..++.++.-
T Consensus 120 ~li~~~~l~~mk~~a~lIN~sRG 142 (193)
T d1mx3a1 120 HLINDFTVKQMRQGAFLVNTARG 142 (193)
T ss_dssp TSBSHHHHTTSCTTEEEEECSCT
T ss_pred hhhhHHHHhccCCCCeEEecCCc
Confidence 1235778899999888888653
|
| >d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=95.92 E-value=0.026 Score=45.68 Aligned_cols=96 Identities=16% Similarity=0.105 Sum_probs=62.7
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHcCC---CeEee--CccHHHHHhcCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKELLGA---DEFIL--STNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~~g~---~~~v~--~~~~~~~~~~~~~~d~vid~ 255 (360)
++||++||=+|+|. |..+..+++.. +.+|++++.++...+.++++... ...+. .............+|+++..
T Consensus 72 ikpG~~VLDlGcGs-G~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v~~i~~~ 150 (230)
T d1g8sa_ 72 IKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYED 150 (230)
T ss_dssp CCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCCEEEEeCEEc-CHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCcccccccceeEEeecc
Confidence 66999999999953 77777888864 34899999999988888774321 12221 22222222223345666665
Q ss_pred CCCc----ccHHHHHHHhccCCEEEEe
Q 018158 256 VSAK----HSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 256 ~g~~----~~~~~~~~~l~~~G~~v~~ 278 (360)
.... ..+..+.+.|+++|+++..
T Consensus 151 ~~~~~~~~~~l~~~~r~LKpgG~~~i~ 177 (230)
T d1g8sa_ 151 VAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp CCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccchHHHHHHHHHHHHhcccCceEEEE
Confidence 5422 2367788899999998765
|
| >d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glycine N-methyltransferase domain: Glycine N-methyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.91 E-value=0.011 Score=49.93 Aligned_cols=92 Identities=16% Similarity=0.099 Sum_probs=61.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC------eEeeCcc--HHHHHhcCCCcCEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD------EFILSTN--AMQMQAGKRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~------~~v~~~~--~~~~~~~~~~~d~v 252 (360)
++++||=+|+|. |..++.|++. |++|++++.+++-++.++++. +.. .+.+..- .+.......++|.|
T Consensus 56 ~~~~vLD~GcG~-G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~v 133 (292)
T d1xvaa_ 56 GCHRVLDVACGT-GVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAV 133 (292)
T ss_dssp TCCEEEESSCTT-SHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEE
T ss_pred CCCEEEEecCCC-cHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeeccccccccccCCCCCceEE
Confidence 678899889864 7778888875 899999999999888776642 211 1111111 11111125679999
Q ss_pred EEcCCCc--------------ccHHHHHHHhccCCEEEE
Q 018158 253 LDTVSAK--------------HSLGPILELLKVNGTLSV 277 (360)
Q Consensus 253 id~~g~~--------------~~~~~~~~~l~~~G~~v~ 277 (360)
+.....- ..+..+.+.|++||.++.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 172 (292)
T d1xvaa_ 134 ICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI 172 (292)
T ss_dssp EECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred EEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence 8644211 147899999999999876
|
| >d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein HI0319 (YecO) domain: Hypothetical protein HI0319 (YecO) species: Haemophilus influenzae [TaxId: 727]
Probab=95.90 E-value=0.0094 Score=48.16 Aligned_cols=95 Identities=13% Similarity=0.093 Sum_probs=61.9
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHH---cCCeEEEEeCChhHHHHHHHHc---CCCeEeeCccHHHHHhcCCCcCEEEEcC
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKA---FGHHVTVISTSPSKEKEAKELL---GADEFILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~---~G~~V~~~~~~~~~~~~~~~~~---g~~~~v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
+++.+||-+|+|. |..+..+++. .+++|++++.+++-++.+++++ +....+.....+........+|+++-..
T Consensus 38 ~~~~~vLDlGCGt-G~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~i~~~~ 116 (225)
T d1im8a_ 38 TADSNVYDLGCSR-GAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVEIKNASMVILNF 116 (225)
T ss_dssp CTTCEEEEESCTT-CHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTCCCCSEEEEEEES
T ss_pred CCCCEEEEeccch-hhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhccccccceeeEEee
Confidence 3899999999953 6666666664 5789999999999998888753 2221111111111111134567776543
Q ss_pred CC--------cccHHHHHHHhccCCEEEEe
Q 018158 257 SA--------KHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 257 g~--------~~~~~~~~~~l~~~G~~v~~ 278 (360)
.. ...++.+.+.|++||.++..
T Consensus 117 ~l~~~~~~d~~~~l~~i~~~LkpgG~li~~ 146 (225)
T d1im8a_ 117 TLQFLPPEDRIALLTKIYEGLNPNGVLVLS 146 (225)
T ss_dssp CGGGSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred eccccChhhHHHHHHHHHHhCCCCceeecc
Confidence 31 13478999999999999875
|
| >d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA methyltransferase RlmA domain: rRNA methyltransferase RlmA species: Escherichia coli [TaxId: 562]
Probab=95.88 E-value=0.0098 Score=49.59 Aligned_cols=93 Identities=14% Similarity=0.155 Sum_probs=65.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
++.+||=+|+|. |..+..+++.. +.++++++.+++.++.++++......+.. +.....-....+|+|+.... ...+
T Consensus 84 ~~~~iLDiGcG~-G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~-d~~~l~~~~~sfD~v~~~~~-~~~~ 160 (268)
T d1p91a_ 84 KATAVLDIGCGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVA-SSHRLPFSDTSMDAIIRIYA-PCKA 160 (268)
T ss_dssp TCCEEEEETCTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEEC-CTTSCSBCTTCEEEEEEESC-CCCH
T ss_pred CCCEEEEeCCCC-cHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceee-ehhhccCCCCCEEEEeecCC-HHHH
Confidence 678888899864 66677777765 67999999999999998885443222221 11112222466999997554 3467
Q ss_pred HHHHHHhccCCEEEEeC
Q 018158 263 GPILELLKVNGTLSVVG 279 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g 279 (360)
.++.+.|++||.++...
T Consensus 161 ~e~~rvLkpgG~l~~~~ 177 (268)
T d1p91a_ 161 EELARVVKPGGWVITAT 177 (268)
T ss_dssp HHHHHHEEEEEEEEEEE
T ss_pred HHHHHHhCCCcEEEEEe
Confidence 99999999999998764
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.87 E-value=0.0037 Score=51.02 Aligned_cols=75 Identities=19% Similarity=0.117 Sum_probs=51.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHcCCC-eEeeCccHHHHHhcCCCcCEEEEcCCCc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKELLGAD-EFILSTNAMQMQAGKRTLDFILDTVSAK 259 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~~~~~d~vid~~g~~ 259 (360)
.+++|||+|+ |.+|..+++.+...|. +|+++.|++.+...-.. -... ...|..+.+.....-.++|+++.++|..
T Consensus 13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~-~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~~ 91 (232)
T d2bkaa1 13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY-KNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 91 (232)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG-GGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccccc-ceeeeeeeccccccccccccccccccccccccc
Confidence 4578999999 9999999998888885 79999987543221111 1111 2234445455555567899999999853
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.84 E-value=0.022 Score=42.79 Aligned_cols=33 Identities=27% Similarity=0.340 Sum_probs=31.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVIST 216 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~ 216 (360)
.|+++||+|+|.+|+.-+..+...|++|+++++
T Consensus 12 ~gkrvLViGgG~va~~ka~~Ll~~GA~VtVvap 44 (150)
T d1kyqa1 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSP 44 (150)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 689999999999999999999999999999965
|
| >d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.83 E-value=0.0078 Score=53.15 Aligned_cols=105 Identities=15% Similarity=0.064 Sum_probs=69.3
Q ss_pred hchhhccCCCCCCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHc----------C----CCeEee
Q 018158 171 FCPMKDNNLIDSPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELL----------G----ADEFIL 235 (360)
Q Consensus 171 ~~~l~~~~~~~~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~----------g----~~~~v~ 235 (360)
.+.+..+. +++|+++|=+|+| +|..+.++|+..|+ +|++++.++...+.++++. | ......
T Consensus 206 ~~Il~~l~---Lkpgd~fLDLGCG-~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~ 281 (406)
T d1u2za_ 206 SDVYQQCQ---LKKGDTFMDLGSG-VGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSL 281 (406)
T ss_dssp HHHHHHTT---CCTTCEEEEESCT-TSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEE
T ss_pred HHHHHHhC---CCCCCEEEeCCCC-CcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeee
Confidence 44555555 6699999989987 59999999999997 7999999988776665421 1 111111
Q ss_pred ---CccHHHHHhcCCCcCEEEEc-CCC----cccHHHHHHHhccCCEEEEeC
Q 018158 236 ---STNAMQMQAGKRTLDFILDT-VSA----KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 236 ---~~~~~~~~~~~~~~d~vid~-~g~----~~~~~~~~~~l~~~G~~v~~g 279 (360)
....+........+|+++-. .-. ...+.++.+.|++||+++..-
T Consensus 282 ~~~f~~~~~~d~~~~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~ 333 (406)
T d1u2za_ 282 KKSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK 333 (406)
T ss_dssp SSCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred eechhhccccccccccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence 11112233334568888742 211 124678888999999998864
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=95.82 E-value=0.01 Score=46.84 Aligned_cols=92 Identities=21% Similarity=0.230 Sum_probs=60.1
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE-eeCccHHHHHhcCCCcCEEEEcCCC-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF-ILSTNAMQMQAGKRTLDFILDTVSA- 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~-v~~~~~~~~~~~~~~~d~vid~~g~- 258 (360)
+| +||-+|+| .|..+..+++ .|++|++++.+++.++.+++. .|.+.+ +...+.... .....+|+|+...--
T Consensus 31 ~g-rvLDiGcG-~G~~~~~la~-~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~-~~~~~fD~I~~~~~~~ 106 (198)
T d2i6ga1 31 PG-RTLDLGCG-NGRNSLYLAA-NGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTL-TFDGEYDFILSTVVMM 106 (198)
T ss_dssp SC-EEEEETCT-TSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTC-CCCCCEEEEEEESCGG
T ss_pred CC-cEEEECCC-CCHHHHHHHH-HhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccc-cccccccEEEEeeeee
Confidence 55 78999996 5777777776 489999999999888776653 343322 111111111 124679999864321
Q ss_pred ----c---ccHHHHHHHhccCCEEEEeC
Q 018158 259 ----K---HSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 259 ----~---~~~~~~~~~l~~~G~~v~~g 279 (360)
. ..+..+.++|+++|.++...
T Consensus 107 ~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 134 (198)
T d2i6ga1 107 FLEAQTIPGLIANMQRCTKPGGYNLIVA 134 (198)
T ss_dssp GSCTTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 1 24677888899999987764
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=95.81 E-value=0.044 Score=37.56 Aligned_cols=81 Identities=11% Similarity=0.177 Sum_probs=55.3
Q ss_pred CCcEEEEEcCChHHHHH-HHHHHHcCCeEEEEeCCh-hHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 184 AKKRIGIVGLGGLGHVA-VKFGKAFGHHVTVISTSP-SKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~a-iqla~~~G~~V~~~~~~~-~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
..+++-++|.|++|..+ +++++..|++|.+.+... ...+.+++ .|..-. ..++.+. ..+.|.++-+.+-...
T Consensus 7 ~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~-~Gi~v~-~g~~~~~----i~~~d~vV~S~AI~~~ 80 (96)
T d1p3da1 7 RVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQ-AGAKIY-IGHAEEH----IEGASVVVVSSAIKDD 80 (96)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHH-TTCEEE-ESCCGGG----GTTCSEEEECTTSCTT
T ss_pred hCCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHH-CCCeEE-ECCcccc----CCCCCEEEECCCcCCC
Confidence 77899999998899765 899999999999999863 34566666 787533 3333322 2568888877665433
Q ss_pred HHHHHHHhc
Q 018158 262 LGPILELLK 270 (360)
Q Consensus 262 ~~~~~~~l~ 270 (360)
..+...+.+
T Consensus 81 npel~~A~~ 89 (96)
T d1p3da1 81 NPELVTSKQ 89 (96)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 344444433
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=95.70 E-value=0.013 Score=46.07 Aligned_cols=90 Identities=16% Similarity=0.131 Sum_probs=63.8
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCc----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAK---- 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~---- 259 (360)
.+.++.|+|.|.+|...+++++.+|.+|+..++........+. .+... ..+ ..+.-+..|+|.-+....
T Consensus 43 ~~~~vgiiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~-~~~~~---~~~---l~~~l~~sD~v~~~~plt~~T~ 115 (188)
T d2naca1 43 EAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKE-LNLTW---HAT---REDMYPVCDVVTLNCPLHPETE 115 (188)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHH-HTCEE---CSS---HHHHGGGCSEEEECSCCCTTTT
T ss_pred cccceeeccccccchhhhhhhhccCceEEEEeecccccccccc-ccccc---cCC---HHHHHHhccchhhcccccccch
Confidence 5889999999999999999999999999999986554444444 44221 111 122345688888766522
Q ss_pred -ccHHHHHHHhccCCEEEEeCC
Q 018158 260 -HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 260 -~~~~~~~~~l~~~G~~v~~g~ 280 (360)
..-.+.++.|+++..++.++.
T Consensus 116 ~li~~~~l~~mk~ga~lIN~aR 137 (188)
T d2naca1 116 HMINDETLKLFKRGAYIVNTAR 137 (188)
T ss_dssp TCBSHHHHTTSCTTEEEEECSC
T ss_pred hhhHHHHHHhCCCCCEEEecCc
Confidence 123678889998888888864
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.68 E-value=0.011 Score=46.54 Aligned_cols=41 Identities=22% Similarity=0.383 Sum_probs=36.3
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHH
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKE 226 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~ 226 (360)
++|.|+|+|.+|...++++...|++|++++++++.++.+++
T Consensus 5 kkvaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~ 45 (192)
T d1f0ya2 5 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKK 45 (192)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred EEEEEECcCHHHHHHHHHHHhCCCcEEEEECChHHHHHHHh
Confidence 57899999999999999999999999999999987665544
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=95.68 E-value=0.023 Score=45.81 Aligned_cols=81 Identities=17% Similarity=0.104 Sum_probs=60.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
.|++|+|.|.|.+|..+++++...|++|++++.+..+.+.+....|...+ +..+ ......|+.+=|.-....-.
T Consensus 38 ~g~~v~IqG~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~-~~~~-----~~~~~cDIl~PcA~~~~I~~ 111 (230)
T d1leha1 38 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-APNA-----IYGVTCDIFAPCALGAVLND 111 (230)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-CGGG-----TTTCCCSEEEECSCSCCBST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCccc-CCcc-----cccccccEecccccccccCh
Confidence 68999999999999999999999999999999999998888876775432 2211 12456788877665443334
Q ss_pred HHHHHhc
Q 018158 264 PILELLK 270 (360)
Q Consensus 264 ~~~~~l~ 270 (360)
.....++
T Consensus 112 ~~~~~l~ 118 (230)
T d1leha1 112 FTIPQLK 118 (230)
T ss_dssp THHHHCC
T ss_pred HHhhccC
Confidence 4445554
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=95.60 E-value=0.0014 Score=50.43 Aligned_cols=86 Identities=21% Similarity=0.251 Sum_probs=54.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-----eEeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-----EFILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-----~~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
+|+|+|+|.+|.+.+..+...|.+|+.+++++++...... .+.+ ..+..... .....+|++|-++-...
T Consensus 2 kI~IiGaG~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~D~iii~vka~~- 75 (167)
T d1ks9a2 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNL-VETDGSIFNESLTANDP----DFLATSDLLLVTLKAWQ- 75 (167)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEE-ECTTSCEEEEEEEESCH----HHHHTCSEEEECSCGGG-
T ss_pred EEEEECcCHHHHHHHHHHHHCCCceEEEEcCHHHhhhhcc-ccCCccccccccccchh----hhhcccceEEEeecccc-
Confidence 6899999999999888888899999999998764433222 2211 11111111 11247999999997653
Q ss_pred HHHHHH----HhccCCEEEEe
Q 018158 262 LGPILE----LLKVNGTLSVV 278 (360)
Q Consensus 262 ~~~~~~----~l~~~G~~v~~ 278 (360)
...+.+ .+.++..++.+
T Consensus 76 ~~~~~~~l~~~~~~~~~Iv~~ 96 (167)
T d1ks9a2 76 VSDAVKSLASTLPVTTPILLI 96 (167)
T ss_dssp HHHHHHHHHTTSCTTSCEEEE
T ss_pred hHHHHHhhccccCcccEEeec
Confidence 344444 44455566665
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=95.58 E-value=0.16 Score=37.71 Aligned_cols=93 Identities=14% Similarity=0.218 Sum_probs=65.3
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcC--CeEEEEe--CChhHHHHHHHHcCCCeEeeCccHHH-------------------
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFG--HHVTVIS--TSPSKEKEAKELLGADEFILSTNAMQ------------------- 241 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G--~~V~~~~--~~~~~~~~~~~~~g~~~~v~~~~~~~------------------- 241 (360)
+++.|+|+ |.+|.-+..+.+..- ++|.++. ++-+.+.....+|.+..++..++...
T Consensus 2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g 81 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSG 81 (151)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEES
T ss_pred CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccC
Confidence 46899999 999999999999873 5666554 34444444444488887765443210
Q ss_pred ---HHh--cCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEe
Q 018158 242 ---MQA--GKRTLDFILDTVSAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 242 ---~~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
... ....+|+++.+..+...+...+..++.+-++...
T Consensus 82 ~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaLA 123 (151)
T d1q0qa2 82 QQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLA 123 (151)
T ss_dssp HHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEEC
T ss_pred hHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEEE
Confidence 011 1347999999998888899999999999776554
|
| >d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810) species: Leishmania major [TaxId: 5664]
Probab=95.54 E-value=0.03 Score=46.02 Aligned_cols=95 Identities=16% Similarity=0.059 Sum_probs=66.9
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeC--ccHHHHHhcCCCcCEEEEcCCCc-
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILS--TNAMQMQAGKRTLDFILDTVSAK- 259 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~--~~~~~~~~~~~~~d~vid~~g~~- 259 (360)
.++.++|=+|+|. |..+.+++.....+|++++.+++-++.+++++.....+.. .+..........+|+|+....-.
T Consensus 92 ~~~~~vLD~GcG~-G~~t~~ll~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I~~~~vl~h 170 (254)
T d1xtpa_ 92 HGTSRALDCGAGI-GRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAIY 170 (254)
T ss_dssp CCCSEEEEETCTT-THHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGGG
T ss_pred CCCCeEEEecccC-ChhhHHHHhhcCceEEEEcCCHHHHHhhhccccccccceeEEccccccccCCCccceEEeeccccc
Confidence 4778888899864 8888888887777999999999999999887654323221 11112222246799998755321
Q ss_pred -------ccHHHHHHHhccCCEEEEe
Q 018158 260 -------HSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 260 -------~~~~~~~~~l~~~G~~v~~ 278 (360)
..+..+.+.|+++|.++..
T Consensus 171 l~d~d~~~~l~~~~~~LkpgG~iii~ 196 (254)
T d1xtpa_ 171 LTDADFVKFFKHCQQALTPNGYIFFK 196 (254)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cchhhhHHHHHHHHHhcCCCcEEEEE
Confidence 2367888999999998865
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=95.53 E-value=0.0093 Score=42.41 Aligned_cols=65 Identities=14% Similarity=0.190 Sum_probs=45.4
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhcC--CCcCEE
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAGK--RTLDFI 252 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~~--~~~d~v 252 (360)
+.+|.|+|+|.+|.+.++.|+.+|+++++.+++++.-. .. +...++ .++++.+...... .++|++
T Consensus 11 ~~kigIlGgGQL~rMla~aA~~lG~~v~v~d~~~~~PA--~~-va~~~i~~~~~d~~~l~~~~~~~~~Dvi 78 (111)
T d1kjqa2 11 ATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADAPA--MH-VAHRSHVINMLDGDALRRVVELEKPHYI 78 (111)
T ss_dssp CCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTCGG--GG-GSSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCCCCCch--hh-cCCeEEECCCCCHHHHHHHHHhhCCceE
Confidence 35699999999999999999999999999998765322 11 332333 3455555444432 467888
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=95.53 E-value=0.0069 Score=39.88 Aligned_cols=35 Identities=23% Similarity=0.412 Sum_probs=31.7
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhH
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSK 220 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~ 220 (360)
++|.|+|+|-+|.+.++.++.+|.++.+++.+++.
T Consensus 2 k~vgIlG~GQLgrMl~~Aa~~LG~~v~vldp~~~~ 36 (78)
T d3etja2 2 KQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEP 36 (78)
T ss_dssp EEEEEEBCSHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred CEEEEEcCCHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence 57899999999999999999999999999977543
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.53 E-value=0.0055 Score=48.15 Aligned_cols=36 Identities=17% Similarity=0.298 Sum_probs=31.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCChh
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSPS 219 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~~ 219 (360)
.+++|+|+|+|+.|+.++..|...|++ |+++++++.
T Consensus 3 ~~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 3 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 468899999999999999999999995 999997753
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=95.44 E-value=0.071 Score=39.82 Aligned_cols=76 Identities=20% Similarity=0.133 Sum_probs=53.3
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHH-HHHHH--cCCCeE-eeCccHHHHHhc-CCCcCEEEEcCCCc
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEK-EAKEL--LGADEF-ILSTNAMQMQAG-KRTLDFILDTVSAK 259 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~-~~~~~--~g~~~~-v~~~~~~~~~~~-~~~~d~vid~~g~~ 259 (360)
-+.++|+|.|.+|..+++.+...|.+|++++.++++.. .+.+. .|...+ -|..+.+.++.. -..+|.++-+++..
T Consensus 3 knHiII~G~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~~d 82 (153)
T d1id1a_ 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND 82 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccccH
Confidence 45789999999999999999999999999998876533 22221 233222 134444555544 46799999988875
Q ss_pred c
Q 018158 260 H 260 (360)
Q Consensus 260 ~ 260 (360)
.
T Consensus 83 ~ 83 (153)
T d1id1a_ 83 A 83 (153)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=95.41 E-value=0.0086 Score=49.29 Aligned_cols=35 Identities=31% Similarity=0.346 Sum_probs=31.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
..++|+|+|+|+.|++++..+...|.+|+++++++
T Consensus 3 ~~~kV~IiGaG~aGl~~A~~L~~~G~~v~v~Er~~ 37 (265)
T d2voua1 3 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSP 37 (265)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 46889999999999999999999999999999754
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=95.40 E-value=0.015 Score=45.73 Aligned_cols=90 Identities=13% Similarity=0.206 Sum_probs=62.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCc----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAK---- 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~---- 259 (360)
.|+++.|+|.|.+|...+++++..|++|++.++.......... .+.. ...+. .+.-...|+|..+....
T Consensus 46 ~g~tvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~-~~~~---~~~~l---~~ll~~sD~v~l~~plt~~T~ 118 (191)
T d1gdha1 46 DNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS-YQAT---FHDSL---DSLLSVSQFFSLNAPSTPETR 118 (191)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH-HTCE---ECSSH---HHHHHHCSEEEECCCCCTTTT
T ss_pred cccceEEeecccchHHHHHHHHhhccccccccccccccchhhc-cccc---ccCCH---HHHHhhCCeEEecCCCCchHh
Confidence 4899999999999999999999999999999976543333323 2221 11121 22334578888766421
Q ss_pred -ccHHHHHHHhccCCEEEEeCC
Q 018158 260 -HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 260 -~~~~~~~~~l~~~G~~v~~g~ 280 (360)
..-...++.|+++..++.++.
T Consensus 119 ~li~~~~l~~mk~~a~lIN~sR 140 (191)
T d1gdha1 119 YFFNKATIKSLPQGAIVVNTAR 140 (191)
T ss_dssp TCBSHHHHTTSCTTEEEEECSC
T ss_pred heecHHHhhCcCCccEEEecCC
Confidence 123578889999988888864
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=95.39 E-value=0.074 Score=40.96 Aligned_cols=95 Identities=15% Similarity=0.182 Sum_probs=60.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcC-CeEEEEe-CChh-HHHHHHHHcCCCeEeeCccHHHHHhc-----------CCCcCEE
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFG-HHVTVIS-TSPS-KEKEAKELLGADEFILSTNAMQMQAG-----------KRTLDFI 252 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G-~~V~~~~-~~~~-~~~~~~~~~g~~~~v~~~~~~~~~~~-----------~~~~d~v 252 (360)
+|.|.|.|-+|...++.+.... .+|+++. +++. ....+.. .+.......+....+... ..++|+|
T Consensus 3 KVaINGfGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vDiV 81 (178)
T d1b7go1 3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHR-RGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIV 81 (178)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHH-TTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcc-cCcceeccCccceeccccceecCCchhhhhhcCCEE
Confidence 5789999999999999988764 5766664 3333 3333333 443333222222111111 2368999
Q ss_pred EEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 253 LDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 253 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+||+|.....+.+-.+++.+-+.+..+...
T Consensus 82 iecTG~f~~~e~a~~hl~~G~KvIi~~~~~ 111 (178)
T d1b7go1 82 VDTTPNGVGAQYKPIYLQLQRNAIFQGGEK 111 (178)
T ss_dssp EECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred EECCCCcCCHHHHHHHHHcCCEEEEECCCC
Confidence 999998766677778887777777776543
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.35 E-value=0.0047 Score=52.75 Aligned_cols=71 Identities=24% Similarity=0.142 Sum_probs=44.4
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCC
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSP-SKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~-~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
++|||+|+ |-+|..++..+...|.+|+++++.. .+.+.+.. .-....++..+.+.......++|+||.+++
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~d~VihlAa 74 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEH-WIGHENFELINHDVVEPLYIEVDQIYHLAS 74 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGG-GTTCTTEEEEECCTTSCCCCCCSEEEECCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHH-hcCCCceEEEehHHHHHHHcCCCEEEECcc
Confidence 68999999 9999999988888999999998522 22222222 111111111111122233457999999876
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.35 E-value=0.14 Score=39.14 Aligned_cols=96 Identities=19% Similarity=0.207 Sum_probs=63.2
Q ss_pred cEEEEEcCChHHHHHHHHHHHcC-CeEEEEe-CChh-HHHHHHHHcCCCeEeeCcc-HHHHHh-----------cCCCcC
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFG-HHVTVIS-TSPS-KEKEAKELLGADEFILSTN-AMQMQA-----------GKRTLD 250 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~-~~~~-~~~~~~~~~g~~~~v~~~~-~~~~~~-----------~~~~~d 250 (360)
-+|.|.|.|-+|...+..+.... .+++.+. .++. ....+.+ ++.+......+ ...... ...++|
T Consensus 3 irIaINGfGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vD 81 (172)
T d2czca2 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKE-LGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVD 81 (172)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHH-TTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCS
T ss_pred EEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhh-cCceeecccccceeeecccCccccchhhhhhccCC
Confidence 36889999999998888776554 4655444 3333 3344555 66443321111 111111 134799
Q ss_pred EEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 251 FILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 251 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+|+||+|.....+.+...+..|-+.|..+...
T Consensus 82 vViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~ 113 (172)
T d2czca2 82 IIVDATPGGIGAKNKPLYEKAGVKAIFQGGEK 113 (172)
T ss_dssp EEEECCSTTHHHHHHHHHHHHTCEEEECTTSC
T ss_pred EEEECCCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence 99999998877788888999999999888765
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=95.33 E-value=0.0078 Score=50.54 Aligned_cols=34 Identities=32% Similarity=0.387 Sum_probs=30.9
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
+++|+|+|+|+.|++++..+...|.+|++++.++
T Consensus 1 ~KkV~IIGaG~aGL~aA~~La~~G~~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEG 34 (373)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 5789999999999999999999999999999654
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=95.32 E-value=0.016 Score=47.40 Aligned_cols=90 Identities=13% Similarity=0.136 Sum_probs=60.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC-eEeeCccHHHHHhcCCCcCEEEEcCCCc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD-EFILSTNAMQMQAGKRTLDFILDTVSAK 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~~v~~~~~~~~~~~~~~~d~vid~~g~~ 259 (360)
++++||=+|+|. |..+..+++ .|.+|++++.+++-++.++++. |.. .++. .+..... ..+.+|+|+...+.-
T Consensus 37 ~~~~vLDiGCG~-G~~~~~l~~-~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~-~d~~~~~-~~~~fD~i~~~~~~~ 112 (246)
T d1y8ca_ 37 VFDDYLDLACGT-GNLTENLCP-KFKNTWAVDLSQEMLSEAENKFRSQGLKPRLAC-QDISNLN-INRKFDLITCCLDST 112 (246)
T ss_dssp CTTEEEEETCTT-STTHHHHGG-GSSEEEEECSCHHHHHHHHHHHHHTTCCCEEEC-CCGGGCC-CSCCEEEEEECTTGG
T ss_pred CCCeEEEEeCcC-CHHHHHHHH-hCCccEeeccchhhhhhccccccccCccceeec-cchhhhc-ccccccccceeeeee
Confidence 567899999963 666776666 4889999999999888776643 322 2332 2222221 256799999643321
Q ss_pred ----------ccHHHHHHHhccCCEEEE
Q 018158 260 ----------HSLGPILELLKVNGTLSV 277 (360)
Q Consensus 260 ----------~~~~~~~~~l~~~G~~v~ 277 (360)
..++.+.++|++||.++.
T Consensus 113 ~~~~~~~~~~~~l~~~~~~LkpgG~~i~ 140 (246)
T d1y8ca_ 113 NYIIDSDDLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp GGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred eccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 146788888999999874
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=95.31 E-value=0.027 Score=44.45 Aligned_cols=87 Identities=23% Similarity=0.306 Sum_probs=61.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc---
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH--- 260 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~--- 260 (360)
.|+++.|+|.|.+|..++++++..|++|++.++...+ +....+...+. .+.-...|++.-++....
T Consensus 44 ~~ktvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~--------~~~~~~~~~~l---~~l~~~~D~v~~~~plt~~T~ 112 (199)
T d1dxya1 44 GQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMK--------GDHPDFDYVSL---EDLFKQSDVIDLHVPGIEQNT 112 (199)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCS--------SCCTTCEECCH---HHHHHHCSEEEECCCCCGGGT
T ss_pred cceeeeeeecccccccccccccccceeeeccCCccch--------hhhcchhHHHH---HHHHHhcccceeeeccccccc
Confidence 5789999999999999999999999999999976432 11111111222 223345788887765321
Q ss_pred --cHHHHHHHhccCCEEEEeCCC
Q 018158 261 --SLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 261 --~~~~~~~~l~~~G~~v~~g~~ 281 (360)
.-.+.++.|+++..++.++.-
T Consensus 113 ~li~~~~l~~mk~~a~lIN~aRG 135 (199)
T d1dxya1 113 HIINEAAFNLMKPGAIVINTARP 135 (199)
T ss_dssp TSBCHHHHHHSCTTEEEEECSCT
T ss_pred ccccHHHhhccCCceEEEecccH
Confidence 236788999999999988753
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=95.24 E-value=0.056 Score=40.76 Aligned_cols=92 Identities=16% Similarity=0.235 Sum_probs=57.2
Q ss_pred cEEEEEcCChHHH-HHHHHHHHcCC-eEEEEe-CChh--HHHHHHHHcCCCeEeeCccHHHHHhc--CCCcCEEEEcCCC
Q 018158 186 KRIGIVGLGGLGH-VAVKFGKAFGH-HVTVIS-TSPS--KEKEAKELLGADEFILSTNAMQMQAG--KRTLDFILDTVSA 258 (360)
Q Consensus 186 ~~vlI~Gag~vG~-~aiqla~~~G~-~V~~~~-~~~~--~~~~~~~~~g~~~~v~~~~~~~~~~~--~~~~d~vid~~g~ 258 (360)
-++.|+|+|.+|. ..+++++.... ++++++ ++.+ ...++++ +|..... ...+.+.+. ..++|+||+++..
T Consensus 5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~-~~i~~~~--~~~d~l~~~~~~~~iDiVf~ATpa 81 (157)
T d1nvmb1 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQR-MGVTTTY--AGVEGLIKLPEFADIDFVFDATSA 81 (157)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHH-TTCCEES--SHHHHHHHSGGGGGEEEEEECSCH
T ss_pred cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhh-cCCcccc--cceeeeeecccccccCEEEEcCCc
Confidence 4689999999986 56788876644 776665 4443 3455566 7754332 222222221 3579999999876
Q ss_pred cccHH--HHHHHhccCCEEEEeCC
Q 018158 259 KHSLG--PILELLKVNGTLSVVGA 280 (360)
Q Consensus 259 ~~~~~--~~~~~l~~~G~~v~~g~ 280 (360)
..... ...+.++.|-.+++...
T Consensus 82 g~h~~~~~~~~aa~~G~~VID~s~ 105 (157)
T d1nvmb1 82 SAHVQNEALLRQAKPGIRLIDLTP 105 (157)
T ss_dssp HHHHHHHHHHHHHCTTCEEEECST
T ss_pred hhHHHhHHHHHHHHcCCEEEEccc
Confidence 54444 44555777777777654
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.17 E-value=0.015 Score=41.59 Aligned_cols=36 Identities=22% Similarity=0.292 Sum_probs=32.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChh
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS 219 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~ 219 (360)
..++++|+|+|.+|+-+++.+..+|.+|+++.+.+.
T Consensus 21 ~p~~v~IiGgG~ig~E~A~~l~~~G~~Vtlve~~~~ 56 (117)
T d1ebda2 21 VPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGE 56 (117)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred cCCeEEEECCCccceeeeeeecccccEEEEEEecce
Confidence 458899999999999999999999999999997653
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=95.14 E-value=0.11 Score=40.38 Aligned_cols=87 Identities=15% Similarity=0.119 Sum_probs=61.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCc----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAK---- 259 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~---- 259 (360)
.++++.|+|.|.+|...+++++..|++|++.++.... .........+. .+.-+..|++..+..-.
T Consensus 43 ~~~~vgiiG~G~IG~~va~~l~~fg~~v~~~d~~~~~--------~~~~~~~~~~l---~ell~~sDii~i~~plt~~T~ 111 (188)
T d1sc6a1 43 RGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKL--------PLGNATQVQHL---SDLLNMSDVVSLHVPENPSTK 111 (188)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCC--------CCTTCEECSCH---HHHHHHCSEEEECCCSSTTTT
T ss_pred cceEEEEeecccchhhhhhhcccccceEeeccccccc--------hhhhhhhhhhH---HHHHhhccceeecccCCcchh
Confidence 5789999999999999999999999999999975431 11111112222 22334578998876522
Q ss_pred -ccHHHHHHHhccCCEEEEeCCC
Q 018158 260 -HSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 260 -~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
..-.+.++.|+++..++.++.-
T Consensus 112 ~li~~~~l~~mk~~a~lIN~aRG 134 (188)
T d1sc6a1 112 NMMGAKEISLMKPGSLLINASRG 134 (188)
T ss_dssp TCBCHHHHHHSCTTEEEEECSCS
T ss_pred hhccHHHHhhCCCCCEEEEcCcH
Confidence 1236888999999999888653
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=95.10 E-value=0.016 Score=41.73 Aligned_cols=35 Identities=23% Similarity=0.389 Sum_probs=31.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
..++++|+|+|.+|+=.++.+..+|.+|+++.+++
T Consensus 21 ~p~~i~IiG~G~ig~E~A~~l~~~G~~Vtiv~~~~ 55 (119)
T d3lada2 21 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD 55 (119)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEEeec
Confidence 45889999999999999999999999999999764
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=95.06 E-value=0.017 Score=41.44 Aligned_cols=35 Identities=26% Similarity=0.380 Sum_probs=32.1
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
..++++|+|+|.+|+-+++.+..+|.+|+++.+.+
T Consensus 21 ~p~~v~IiGgG~iG~E~A~~l~~~g~~Vtlv~~~~ 55 (117)
T d1onfa2 21 ESKKIGIVGSGYIAVELINVIKRLGIDSYIFARGN 55 (117)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred CCCEEEEECCchHHHHHHHHHHhccccceeeehhc
Confidence 56899999999999999999999999999999764
|
| >d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: mRNA cap (Guanine N-7) methyltransferase domain: mRNA cap (Guanine N-7) methyltransferase species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
Probab=94.98 E-value=0.031 Score=45.80 Aligned_cols=95 Identities=13% Similarity=0.058 Sum_probs=61.2
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCC-eEe--eCccHHHHHhcCCCcCEEEEcC
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GAD-EFI--LSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~~v--~~~~~~~~~~~~~~~d~vid~~ 256 (360)
+++++||=+|+|. |..+..+++.-..+|++++.+++.++.+++++ +.. .+. ..+...........+|+|+...
T Consensus 23 ~~~~~VLDlGCG~-G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~~~fD~V~~~~ 101 (252)
T d1ri5a_ 23 KRGDSVLDLGCGK-GGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 101 (252)
T ss_dssp CTTCEEEEETCTT-TTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCcCEEEEecccC-cHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcccccccceEEEEcc
Confidence 4899999999965 55567777764458999999999998887653 221 221 1111000011256799998654
Q ss_pred CCc----------ccHHHHHHHhccCCEEEEe
Q 018158 257 SAK----------HSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 257 g~~----------~~~~~~~~~l~~~G~~v~~ 278 (360)
.-. ..+..+.+.|++||.++..
T Consensus 102 ~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~ 133 (252)
T d1ri5a_ 102 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMT 133 (252)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred eeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence 321 2356677889999998753
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=94.98 E-value=0.013 Score=45.95 Aligned_cols=83 Identities=14% Similarity=0.113 Sum_probs=56.0
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC--Ce---EeeCccH---HHHHhcCCCcCEEEEcCC
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA--DE---FILSTNA---MQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~--~~---~v~~~~~---~~~~~~~~~~d~vid~~g 257 (360)
.+|.|+|+|..|.+.+.++-..|.+|+..+++++..+.+.+ -+. .+ +..+++- ....+.-.+.|+++-++.
T Consensus 8 ~KI~ViGaG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~-~~~n~~yl~~~~l~~~i~~t~~l~~a~~~ad~iiiavP 86 (189)
T d1n1ea2 8 NKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNE-KRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIP 86 (189)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHH-HTBCTTTSTTCBCCTTEEEESCHHHHHTTCSCEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhh-cccccccccccccccccccchhhhhccCCCCEEEEcCc
Confidence 46899999999999998888888899999999998888766 221 10 0000000 122333467899999998
Q ss_pred CcccHHHHHHHhc
Q 018158 258 AKHSLGPILELLK 270 (360)
Q Consensus 258 ~~~~~~~~~~~l~ 270 (360)
.. .+...++.++
T Consensus 87 s~-~~~~~~~~~~ 98 (189)
T d1n1ea2 87 TQ-FLRGFFEKSG 98 (189)
T ss_dssp HH-HHHHHHHHHC
T ss_pred HH-HHHHHHHHHH
Confidence 65 3455555443
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=94.98 E-value=0.073 Score=42.62 Aligned_cols=92 Identities=14% Similarity=0.105 Sum_probs=62.4
Q ss_pred cEEEEEcCChHHH-HHHHHHHHc-CCeEE-EEeCChhHHHHHHHHcCCC--eEeeCccHHHHHhcCCCcCEEEEcCCCcc
Q 018158 186 KRIGIVGLGGLGH-VAVKFGKAF-GHHVT-VISTSPSKEKEAKELLGAD--EFILSTNAMQMQAGKRTLDFILDTVSAKH 260 (360)
Q Consensus 186 ~~vlI~Gag~vG~-~aiqla~~~-G~~V~-~~~~~~~~~~~~~~~~g~~--~~v~~~~~~~~~~~~~~~d~vid~~g~~~ 260 (360)
-+|.|+|+|.+|. ..+...+.. +.+|+ ++++++++.+.+.+++|.. .+..+++.+.+-. ...+|+|+-++....
T Consensus 34 iriaiIG~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d~~ell~-~~~iD~V~I~tp~~~ 112 (221)
T d1h6da1 34 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAK-DPKIDAVYIILPNSL 112 (221)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGG-CTTCCEEEECSCGGG
T ss_pred EEEEEEcCcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCchhhhcc-cccceeeeeccchhh
Confidence 4788999999986 344444444 67766 5677888888877778743 3333444332211 457999999999887
Q ss_pred cHHHHHHHhccCCEEEEeC
Q 018158 261 SLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 261 ~~~~~~~~l~~~G~~v~~g 279 (360)
+...+..+++.| .-+.+-
T Consensus 113 H~~~~~~al~~g-k~v~~E 130 (221)
T d1h6da1 113 HAEFAIRAFKAG-KHVMCE 130 (221)
T ss_dssp HHHHHHHHHHTT-CEEEEC
T ss_pred hhhHHHHhhhcc-hhhhcC
Confidence 778888888876 445553
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.96 E-value=0.018 Score=41.56 Aligned_cols=35 Identities=31% Similarity=0.421 Sum_probs=31.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
..++++|+|+|.+|+-+++.+..+|.+|+++.+.+
T Consensus 22 ~p~~~vIiG~G~ig~E~A~~l~~lG~~Vtii~~~~ 56 (122)
T d1v59a2 22 IPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQP 56 (122)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCeEEEECCCchHHHHHHHHHhhCcceeEEEecc
Confidence 44789999999999999999999999999999765
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=94.95 E-value=0.019 Score=41.26 Aligned_cols=36 Identities=14% Similarity=0.078 Sum_probs=33.1
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
.++++++|+|+|.+|+-.++.++.+|.+|+++.+.+
T Consensus 20 ~~~~~vvVvGgG~ig~E~A~~l~~~g~~vt~i~~~~ 55 (121)
T d1mo9a2 20 EPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTE 55 (121)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcchhheEeeccc
Confidence 378999999999999999999999999999999765
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=94.93 E-value=0.17 Score=33.87 Aligned_cols=77 Identities=19% Similarity=0.285 Sum_probs=51.2
Q ss_pred cEEEEEcCChHHHH-HHHHHHHcCCeEEEEeCChh-HHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 186 KRIGIVGLGGLGHV-AVKFGKAFGHHVTVISTSPS-KEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 186 ~~vlI~Gag~vG~~-aiqla~~~G~~V~~~~~~~~-~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
-++-++|.|++|.. ++++++..|+.|.+.|+... ..+.+++ .|..-. ..++.+. -.++|+|+-+.+-.....
T Consensus 2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~-~Gi~i~-~gh~~~~----i~~~d~vV~SsAI~~~np 75 (89)
T d1j6ua1 2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRK-LGIPIF-VPHSADN----WYDPDLVIKTPAVRDDNP 75 (89)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH-TTCCEE-SSCCTTS----CCCCSEEEECTTCCTTCH
T ss_pred cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHH-CCCeEE-eeecccc----cCCCCEEEEecCcCCCCH
Confidence 35677899889984 57999999999999998764 4555666 897533 2333322 246899987766443334
Q ss_pred HHHHH
Q 018158 264 PILEL 268 (360)
Q Consensus 264 ~~~~~ 268 (360)
+...+
T Consensus 76 el~~A 80 (89)
T d1j6ua1 76 EIVRA 80 (89)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44333
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=94.91 E-value=0.021 Score=41.14 Aligned_cols=36 Identities=31% Similarity=0.482 Sum_probs=33.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChh
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS 219 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~ 219 (360)
++++++|+|+|.+|.-++..++.+|.+|+++.+++.
T Consensus 29 ~~~~vvIIGgG~iG~E~A~~l~~~g~~Vtli~~~~~ 64 (121)
T d1d7ya2 29 PQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPR 64 (121)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred cCCeEEEECcchhHHHHHHHhhcccceEEEEeeccc
Confidence 789999999999999999999999999999997753
|
| >d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Adrenal gland protein AD-003 (C9orf32) species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.91 E-value=0.025 Score=45.43 Aligned_cols=94 Identities=15% Similarity=0.148 Sum_probs=65.1
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCC---C--eEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGA---D--EFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~---~--~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
++.+||-+|+|. |..+..+++..+.+|++++.+++-++.+++++.. . ..+.. +..........+|+|+....-
T Consensus 60 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~-d~~~~~~~~~~fD~I~~~~~l 137 (222)
T d2ex4a1 60 GTSCALDCGAGI-GRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCC-GLQDFTPEPDSYDVIWIQWVI 137 (222)
T ss_dssp CCSEEEEETCTT-THHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEEC-CGGGCCCCSSCEEEEEEESCG
T ss_pred CCCEEEEeccCC-CHhhHHHHHhcCCEEEEeecCHHHhhccccccccccccccccccc-ccccccccccccccccccccc
Confidence 778899999864 7777777777777999999999999998886432 1 11221 111222225679999874431
Q ss_pred -----c---ccHHHHHHHhccCCEEEEeC
Q 018158 259 -----K---HSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 259 -----~---~~~~~~~~~l~~~G~~v~~g 279 (360)
. ..+..+.+.|+++|.++..-
T Consensus 138 ~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~ 166 (222)
T d2ex4a1 138 GHLTDQHLAEFLRRCKGSLRPNGIIVIKD 166 (222)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccchhhhhhhHHHHHHHhcCCcceEEEEE
Confidence 1 35778889999999998763
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=94.88 E-value=0.02 Score=40.90 Aligned_cols=35 Identities=17% Similarity=0.249 Sum_probs=31.8
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
..++++|+|+|.+|+-+++.++.+|.+|+++.+.+
T Consensus 20 ~p~~vvIiGgG~ig~E~A~~l~~~G~~Vtlve~~~ 54 (116)
T d1gesa2 20 LPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD 54 (116)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCEEEEECCChhhHHHHHHhhccccEEEEEeecc
Confidence 34789999999999999999999999999999865
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=94.83 E-value=0.042 Score=45.93 Aligned_cols=74 Identities=22% Similarity=0.297 Sum_probs=50.4
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChh-----HHHHHHHH--cCCCeE-eeCccHHHHHhcCCCcCEEEEc
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPS-----KEKEAKEL--LGADEF-ILSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~-----~~~~~~~~--~g~~~~-v~~~~~~~~~~~~~~~d~vid~ 255 (360)
-++|||+|+ |-+|..++..+...|.+|+++.|+.. +.+.+... .+.+.+ .|..+.+.......+.+.++.+
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~ 82 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 82 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhh
Confidence 456999999 99999999988889999999998642 22222221 334322 2444555555556788899987
Q ss_pred CCC
Q 018158 256 VSA 258 (360)
Q Consensus 256 ~g~ 258 (360)
.+.
T Consensus 83 ~~~ 85 (312)
T d1qyda_ 83 LAG 85 (312)
T ss_dssp CCC
T ss_pred hhh
Confidence 763
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=94.81 E-value=0.018 Score=45.06 Aligned_cols=41 Identities=12% Similarity=0.148 Sum_probs=35.8
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHH
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKE 226 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~ 226 (360)
++|.|+|+|.+|...++++-..|++|++.+++++.++.+.+
T Consensus 5 ~~vaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~ 45 (186)
T d1wdka3 5 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLA 45 (186)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhh
Confidence 56899999999999888888899999999999987766544
|
| >d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Bacillus subtilis [TaxId: 1423]
Probab=94.80 E-value=0.076 Score=44.03 Aligned_cols=95 Identities=20% Similarity=0.259 Sum_probs=65.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHc----CC-----CeEeeCccHHHHHhcCCCcCEEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELL----GA-----DEFILSTNAMQMQAGKRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~----g~-----~~~v~~~~~~~~~~~~~~~d~vi 253 (360)
..++|||+|+|. |..+-.++++.+. +|++++.+++=.+.+++.+ ++ -.++..+....++...+++|+|+
T Consensus 75 ~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~D~~~~l~~~~~~yDvIi 153 (274)
T d1iy9a_ 75 NPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (274)
T ss_dssp SCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEechHHHHHhhcCCCCCEEE
Confidence 568999998854 5556677777665 8999999999888877744 21 13333333345555577899997
Q ss_pred -EcCC---------CcccHHHHHHHhccCCEEEEeC
Q 018158 254 -DTVS---------AKHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 254 -d~~g---------~~~~~~~~~~~l~~~G~~v~~g 279 (360)
|... ....++.+.+.|+++|.++.-.
T Consensus 154 ~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q~ 189 (274)
T d1iy9a_ 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (274)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEec
Confidence 4332 1123788999999999998654
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=94.72 E-value=0.05 Score=44.68 Aligned_cols=34 Identities=21% Similarity=0.106 Sum_probs=30.4
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhH
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSK 220 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~ 220 (360)
++||+|+ +++|.++++.+...|++|++++++.++
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~ 37 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEG 37 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH
Confidence 4688899 999999999999999999999988654
|
| >d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Met-10+ protein-like domain: Hypothetical protein PH0793 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=94.69 E-value=0.022 Score=47.08 Aligned_cols=94 Identities=17% Similarity=0.115 Sum_probs=59.5
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCC---eEeeCccHHHHHhcCCCcCEEEEc
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGAD---EFILSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~~~~~~~~~~~~d~vid~ 255 (360)
+++|++||-.|+| +|..++.+|+.-+++|++++.+++..+.+++. .|.+ .+++.+.. ... ....+|.|+-.
T Consensus 105 ~~~g~~VlD~~aG-~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~-~~~-~~~~~D~Ii~~ 181 (260)
T d2frna1 105 AKPDELVVDMFAG-IGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNR-DFP-GENIADRILMG 181 (260)
T ss_dssp CCTTCEEEETTCT-TTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTT-TCC-CCSCEEEEEEC
T ss_pred cCCccEEEECcce-EcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchH-Hhc-cCCCCCEEEEC
Confidence 3499999988774 34555566766456999999999988777654 3432 22322211 111 13458877632
Q ss_pred -C-CCcccHHHHHHHhccCCEEEEe
Q 018158 256 -V-SAKHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 256 -~-g~~~~~~~~~~~l~~~G~~v~~ 278 (360)
. .....+..+++.+++||.+...
T Consensus 182 ~p~~~~~~l~~a~~~l~~gG~lh~~ 206 (260)
T d2frna1 182 YVVRTHEFIPKALSIAKDGAIIHYH 206 (260)
T ss_dssp CCSSGGGGHHHHHHHEEEEEEEEEE
T ss_pred CCCchHHHHHHHHhhcCCCCEEEEE
Confidence 2 2344578899999999987544
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=94.67 E-value=0.025 Score=40.33 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=31.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
..++++|+|+|.+|+-+++.++.+|.+|+++.+.+
T Consensus 20 ~p~~vvIiGgG~~G~E~A~~l~~~g~~Vtlve~~~ 54 (115)
T d1lvla2 20 LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARE 54 (115)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHhhcccceEEEeeec
Confidence 34889999999999999999999999999999764
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=94.58 E-value=0.028 Score=40.55 Aligned_cols=35 Identities=26% Similarity=0.279 Sum_probs=32.1
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
.+++++|+|+|.+|+-+++.+..+|.+|+++.+.+
T Consensus 29 ~~k~vvViGgG~iG~E~A~~l~~~g~~Vtlie~~~ 63 (123)
T d1nhpa2 29 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD 63 (123)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEECChHHHHHHHHHhhccceEEEEEEecC
Confidence 67899999999999999999999999999998764
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=94.58 E-value=0.018 Score=48.84 Aligned_cols=35 Identities=37% Similarity=0.414 Sum_probs=31.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
..++|+|+|+|..|+.++..+...|.+|++++.++
T Consensus 29 ~pkkV~IIGaG~aGLsaA~~L~~~G~~V~vlE~~~ 63 (370)
T d2iida1 29 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE 63 (370)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 66799999999999999998888999999999764
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=94.54 E-value=0.017 Score=49.81 Aligned_cols=75 Identities=12% Similarity=0.040 Sum_probs=51.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC----CCeE-eeCccHHHHHhc--CCCcCEEEEc
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG----ADEF-ILSTNAMQMQAG--KRTLDFILDT 255 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g----~~~~-v~~~~~~~~~~~--~~~~d~vid~ 255 (360)
++++|||+|+ |-+|..+++.+...|.+|++++++..+...+.+... .+.+ .|-.+.+.+... ...+|+++.+
T Consensus 7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~ 86 (356)
T d1rkxa_ 7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM 86 (356)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence 6899999999 999999999999999999999987654332222121 1111 133344333333 4568999998
Q ss_pred CCC
Q 018158 256 VSA 258 (360)
Q Consensus 256 ~g~ 258 (360)
++.
T Consensus 87 aa~ 89 (356)
T d1rkxa_ 87 AAQ 89 (356)
T ss_dssp CSC
T ss_pred hcc
Confidence 874
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=94.53 E-value=0.021 Score=46.26 Aligned_cols=36 Identities=28% Similarity=0.288 Sum_probs=32.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChh
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS 219 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~ 219 (360)
.+++|+|+|+|+.|+.++..++..|.+|++++.+++
T Consensus 48 ~~k~VvIIGaGpAGl~aA~~l~~~G~~v~l~E~~~~ 83 (233)
T d1djqa3 48 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEK 83 (233)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCceEEEEcccHHHHHHHHHHHHhccceeeEeeccc
Confidence 789999999999999999999999999999997653
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.50 E-value=0.034 Score=43.14 Aligned_cols=42 Identities=24% Similarity=0.333 Sum_probs=36.1
Q ss_pred EEEEE-cCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc
Q 018158 187 RIGIV-GLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL 228 (360)
Q Consensus 187 ~vlI~-Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~ 228 (360)
+|.|+ |+|.+|.++++.+...|++|++.+|++++.+.+.+++
T Consensus 2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i 44 (212)
T d1jaya_ 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY 44 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 47788 4599999999999999999999999999887776643
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=94.47 E-value=0.016 Score=43.62 Aligned_cols=82 Identities=15% Similarity=0.144 Sum_probs=53.1
Q ss_pred EEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHHHHHHh
Q 018158 190 IVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPILELL 269 (360)
Q Consensus 190 I~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l 269 (360)
++|+|-+|...++.++..+..+.+..|+.++.+.+.+..+.. ..+. .+..+..|+||-|+... .+..+.+.+
T Consensus 4 fIG~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~-~~~~------~~~~~~~DiVil~v~d~-~i~~v~~~l 75 (153)
T d2i76a2 4 FVGTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGK-AATL------EKHPELNGVVFVIVPDR-YIKTVANHL 75 (153)
T ss_dssp EESCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCC-CCSS------CCCCC---CEEECSCTT-THHHHHTTT
T ss_pred EEeCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhccccc-ccch------hhhhccCcEEEEeccch-hhhHHHhhh
Confidence 679999999988877664333568899999999998855432 2221 12356789999999876 467788888
Q ss_pred ccCC-EEEEeC
Q 018158 270 KVNG-TLSVVG 279 (360)
Q Consensus 270 ~~~G-~~v~~g 279 (360)
+..+ .++.+.
T Consensus 76 ~~~~~ivi~~s 86 (153)
T d2i76a2 76 NLGDAVLVHCS 86 (153)
T ss_dssp CCSSCCEEECC
T ss_pred cccceeeeecc
Confidence 6444 445554
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.47 E-value=0.025 Score=40.86 Aligned_cols=34 Identities=24% Similarity=0.241 Sum_probs=30.8
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTS 217 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~ 217 (360)
..++++|+|+|.+|+-.++.++.+|.+|+++.++
T Consensus 19 ~P~~vvIIGgG~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 19 CPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCeEEEECCCccHHHHHHHHhhcCCeEEEEEec
Confidence 4468999999999999999999999999999865
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=94.42 E-value=0.02 Score=41.45 Aligned_cols=35 Identities=23% Similarity=0.325 Sum_probs=32.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
..++++|+|+|.+|+=.++.+..+|.+|+++.+++
T Consensus 24 ~p~~~viiG~G~iglE~A~~~~~~G~~Vtvi~~~~ 58 (123)
T d1dxla2 24 IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFAS 58 (123)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred cCCeEEEEccchHHHHHHHHHHhcCCeEEEEEEcc
Confidence 55899999999999999999999999999999865
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=94.42 E-value=0.026 Score=45.91 Aligned_cols=34 Identities=21% Similarity=0.349 Sum_probs=30.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTS 217 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~ 217 (360)
..++|+|+|+|..|++++..+...|.+|+++++.
T Consensus 5 ~~~kVvVIGaGiaGl~~A~~L~~~G~~V~vier~ 38 (268)
T d1c0pa1 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARD 38 (268)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCcEEEECccHHHHHHHHHHHHCCCCEEEEeCC
Confidence 5678999999999999999999999999999964
|
| >d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein ECA1738 species: Erwinia carotovora [TaxId: 554]
Probab=94.33 E-value=0.05 Score=43.64 Aligned_cols=91 Identities=19% Similarity=0.131 Sum_probs=58.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-eEeeCccHHHHHhcCCCcCEEEEcCCC----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-EFILSTNAMQMQAGKRTLDFILDTVSA---- 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~~~~~d~vid~~g~---- 258 (360)
++++||=+|+|. |..+..+++ .|.+|++++.+++..+.+++++.-. .++. .+.+.. .....+|+|+..---
T Consensus 20 ~~~~VLDiGcG~-G~~~~~l~~-~g~~v~giD~s~~~i~~a~~~~~~~~~~~~-~~~~~~-~~~~~fD~I~~~~vleh~~ 95 (225)
T d2p7ia1 20 RPGNLLELGSFK-GDFTSRLQE-HFNDITCVEASEEAISHAQGRLKDGITYIH-SRFEDA-QLPRRYDNIVLTHVLEHID 95 (225)
T ss_dssp CSSCEEEESCTT-SHHHHHHTT-TCSCEEEEESCHHHHHHHHHHSCSCEEEEE-SCGGGC-CCSSCEEEEEEESCGGGCS
T ss_pred CCCcEEEEeCCC-cHHHHHHHH-cCCeEEEEeCcHHHhhhhhccccccccccc-cccccc-ccccccccccccceeEecC
Confidence 567889899864 666665554 5889999999999999998865522 2222 222221 125679999853321
Q ss_pred --cccHHHHH-HHhccCCEEEEe
Q 018158 259 --KHSLGPIL-ELLKVNGTLSVV 278 (360)
Q Consensus 259 --~~~~~~~~-~~l~~~G~~v~~ 278 (360)
...+..+. ++|++||.++..
T Consensus 96 d~~~~l~~i~~~~Lk~gG~l~i~ 118 (225)
T d2p7ia1 96 DPVALLKRINDDWLAEGGRLFLV 118 (225)
T ss_dssp SHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CHHHHHHHHHHHhcCCCceEEEE
Confidence 11245555 578999988764
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=94.32 E-value=0.022 Score=46.26 Aligned_cols=36 Identities=28% Similarity=0.279 Sum_probs=32.2
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhH
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSK 220 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~ 220 (360)
++++||+|+ +++|.+.++.+...|++|++++++++.
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~ 37 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG 37 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc
Confidence 478899999 999999999999999999999988653
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=94.29 E-value=0.31 Score=37.06 Aligned_cols=95 Identities=19% Similarity=0.183 Sum_probs=60.6
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC----eEeeCccHHHHHhcCCCcCEEEEcCCCccc-
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD----EFILSTNAMQMQAGKRTLDFILDTVSAKHS- 261 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~----~~v~~~~~~~~~~~~~~~d~vid~~g~~~~- 261 (360)
+|-|+|.|.+|...+.-+...|++|++.++++++.+.+.+..+.. ......+.+.+...-...+.++.+......
T Consensus 3 kIGvIGlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (178)
T d1pgja2 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAAT 82 (178)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHH
T ss_pred EEEEEeehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchh
Confidence 367889999999888888888999999999999999888733321 111122222222234456666666654332
Q ss_pred ---HHHHHHHhccCCEEEEeCCC
Q 018158 262 ---LGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 262 ---~~~~~~~l~~~G~~v~~g~~ 281 (360)
+......+.++..++..+..
T Consensus 83 ~~~~~~~~~~~~~~~iii~~st~ 105 (178)
T d1pgja2 83 DSTIEQLKKVFEKGDILVDTGNA 105 (178)
T ss_dssp HHHHHHHHHHCCTTCEEEECCCC
T ss_pred hhhhhhhhhhccccceecccCcc
Confidence 24555566666666666543
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=94.23 E-value=0.033 Score=40.35 Aligned_cols=35 Identities=17% Similarity=0.232 Sum_probs=32.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
..++++|+|+|.+|+=+++.++.+|.+|+++.+.+
T Consensus 25 ~p~~vvIiGgG~IG~E~A~~~~~~G~~Vtive~~~ 59 (125)
T d1ojta2 25 VPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMD 59 (125)
T ss_dssp CCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred cCCeEEEECCCHHHHHHHHHhhcCCCEEEEEEeec
Confidence 56899999999999999999999999999998764
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.21 E-value=0.035 Score=40.18 Aligned_cols=34 Identities=21% Similarity=0.218 Sum_probs=31.4
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
.++++|+|+|.+|+-++..++.+|.+|+++.+++
T Consensus 22 pk~vvIvGgG~iG~E~A~~l~~~G~~Vtlv~~~~ 55 (125)
T d3grsa2 22 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD 55 (125)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCEEEEEcCCccHHHHHHHHhcCCcEEEEEeecc
Confidence 4789999999999999999999999999999864
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=94.21 E-value=0.067 Score=45.28 Aligned_cols=71 Identities=21% Similarity=0.176 Sum_probs=45.9
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC--Chh---HHHHHHHHcCCCeEe--eCccHHHHHhc--CCCcCEEEEcC
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFGHHVTVIST--SPS---KEKEAKELLGADEFI--LSTNAMQMQAG--KRTLDFILDTV 256 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~--~~~---~~~~~~~~~g~~~~v--~~~~~~~~~~~--~~~~d~vid~~ 256 (360)
+|||+|+ |-+|..+++.+...|.+|+++++ ... +...+.. .+.-.++ |-.+.+.+... +.++|+||.++
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~-~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~a 80 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA 80 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc-cCCcEEEEcccCCHHHHHHHHHhcCCceEEeec
Confidence 6899999 99999999988888999999873 122 2233333 3322222 33333333333 44689999988
Q ss_pred CC
Q 018158 257 SA 258 (360)
Q Consensus 257 g~ 258 (360)
+.
T Consensus 81 a~ 82 (338)
T d1orra_ 81 GQ 82 (338)
T ss_dssp CC
T ss_pred cc
Confidence 64
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.20 E-value=0.074 Score=44.95 Aligned_cols=89 Identities=19% Similarity=0.179 Sum_probs=51.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHH---HHHHHcCC-C--eEeeCccHHHHHhcCCCcCEEEEc-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEK---EAKELLGA-D--EFILSTNAMQMQAGKRTLDFILDT- 255 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~---~~~~~~g~-~--~~v~~~~~~~~~~~~~~~d~vid~- 255 (360)
+|++||-+|+| .|..++.+|+. |+ +|++++.++.-.. ..++ .+. + .++.. +..........+|+|+.-
T Consensus 35 ~~~~VLDiGcG-~G~lsl~aa~~-Ga~~V~aid~s~~~~~a~~~~~~-~~~~~~i~~~~~-~~~~l~~~~~~~D~Ivse~ 110 (311)
T d2fyta1 35 KDKVVLDVGCG-TGILSMFAAKA-GAKKVLGVDQSEILYQAMDIIRL-NKLEDTITLIKG-KIEEVHLPVEKVDVIISEW 110 (311)
T ss_dssp TTCEEEEETCT-TSHHHHHHHHT-TCSEEEEEESSTHHHHHHHHHHH-TTCTTTEEEEES-CTTTSCCSCSCEEEEEECC
T ss_pred CcCEEEEECCC-CCHHHHHHHHc-CCCEEEEEeCHHHHHHHHHHHHH-hCCCccceEEEe-eHHHhcCccccceEEEEee
Confidence 89999999996 46666666664 76 7999998875432 2222 342 2 22222 222222224689999852
Q ss_pred CC----CcccHH----HHHHHhccCCEEE
Q 018158 256 VS----AKHSLG----PILELLKVNGTLS 276 (360)
Q Consensus 256 ~g----~~~~~~----~~~~~l~~~G~~v 276 (360)
.+ ....+. ..-+.|+++|+++
T Consensus 111 ~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii 139 (311)
T d2fyta1 111 MGYFLLFESMLDSVLYAKNKYLAKGGSVY 139 (311)
T ss_dssp CBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred eeeecccccccHHHHHHHHhcCCCCcEEe
Confidence 22 111222 2345789999885
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=94.16 E-value=0.02 Score=49.68 Aligned_cols=73 Identities=14% Similarity=0.129 Sum_probs=49.8
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC--eEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD--EFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
++-+|||+|+ |-+|..++..+...|.+|+++++....... .. .... ...|..+.+.......++|.|+.+++.
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~-~~-~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~ 89 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-ED-MFCDEFHLVDLRVMENCLKVTEGVDHVFNLAAD 89 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-GG-GTCSEEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh-hh-cccCcEEEeechhHHHHHHHhhcCCeEeecccc
Confidence 5788999999 999999999999999999999864332111 11 1111 223444444444456789999998853
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=94.16 E-value=0.34 Score=36.74 Aligned_cols=95 Identities=15% Similarity=0.131 Sum_probs=61.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcC-CeEEEEe-CCh-hHHHHHHHHcCCCeEeeCccH-HHH-----------HhcCCCcCE
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFG-HHVTVIS-TSP-SKEKEAKELLGADEFILSTNA-MQM-----------QAGKRTLDF 251 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G-~~V~~~~-~~~-~~~~~~~~~~g~~~~v~~~~~-~~~-----------~~~~~~~d~ 251 (360)
+|.|.|-|-+|..+++++...+ .+++++. .++ .....+.. ++.+......+. ... .....++|+
T Consensus 3 ~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~vDv 81 (171)
T d1cf2o1 3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALK-KGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI 81 (171)
T ss_dssp EEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHH-TTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred EEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHh-cCCceEecccccceeecccCcccCCChhHhhcCCCE
Confidence 6889999999999998887665 4655554 332 33344444 664433322221 111 111347999
Q ss_pred EEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 252 ILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 252 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
|+||+|.......+...+..|-+.+..+...
T Consensus 82 ViEcTG~f~~~~~~~~hl~~G~K~vi~~~~~ 112 (171)
T d1cf2o1 82 VIDCTPEGIGAKNLKMYKEKGIKAIFQGGEK 112 (171)
T ss_dssp EEECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred EEEccCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence 9999998766677888888888888776554
|
| >d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
Probab=94.15 E-value=0.15 Score=38.68 Aligned_cols=130 Identities=14% Similarity=0.218 Sum_probs=75.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeC---ChhHHHHHHHHcCC------CeE--------eeCcc-----HHHHHh
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVIST---SPSKEKEAKELLGA------DEF--------ILSTN-----AMQMQA 244 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~---~~~~~~~~~~~~g~------~~~--------v~~~~-----~~~~~~ 244 (360)
+|-|.|-|-+|.++...+...+.+|.++-. +.+....+.+ +-. ..+ ++.+. .....+
T Consensus 2 kIgINGfGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlk-yDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~ 80 (169)
T d1dssg1 2 KIGINGFGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFK-YDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPEN 80 (169)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHH-CCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred eEEEECCcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHh-cccccCCcCCeEEEeCCEEEECCEEEEEEecCChHH
Confidence 477889999999999988888888766653 3355566655 321 111 11110 001111
Q ss_pred c---CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCCCCcccCh----hhHhccCcEEEEeecCCHHHHHHHHHHH
Q 018158 245 G---KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPEAPFELPS----FPLIFGKRSVKGSMTGGMRETQEMMNVC 317 (360)
Q Consensus 245 ~---~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~----~~~~~~~~~i~~~~~~~~~~~~~~~~~l 317 (360)
. ..++|+|+||+|.......+...+..+-+-|.+..+....+.-. ...+.....+.....-+..-+..+++.|
T Consensus 81 i~W~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~~d~~~iV~GVN~~~~~~~~~IIS~aSCTtn~laP~~k~l 160 (169)
T d1dssg1 81 IPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSADAPMFVCGVNLEKYSKDMKVVSNASNEFGYSQRVIDLI 160 (169)
T ss_dssp CCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCSSSCBCCTTTSGGGCCTTCCEEECCCTTHHHHHHHHHHH
T ss_pred CCccccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCccccceeeecccccccCCCCCEEEChhHHHHHHHHHHHHH
Confidence 1 35899999999987777888888888766666655443222111 1122234455554444445555555444
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=94.15 E-value=0.04 Score=40.35 Aligned_cols=35 Identities=26% Similarity=0.361 Sum_probs=32.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
++++++|+|+|.+|+-++..++.+|.+|+++.+.+
T Consensus 34 ~~k~v~VIGgG~iG~E~A~~l~~~g~~Vtvie~~~ 68 (133)
T d1q1ra2 34 ADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAA 68 (133)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCEEEEECCchHHHHHHHHHHhhCcceeeeeecc
Confidence 78999999999999999999999999999999764
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=94.12 E-value=0.28 Score=37.55 Aligned_cols=130 Identities=17% Similarity=0.163 Sum_probs=79.3
Q ss_pred EEEEEcCChHHHH-HHHHHHHcC--CeEE-EEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 187 RIGIVGLGGLGHV-AVKFGKAFG--HHVT-VISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 187 ~vlI~Gag~vG~~-aiqla~~~G--~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
++.|+|+|.+|.- .+...+..+ .+++ +.+++.++.+.+.++++...+++ +.+.+- ....+|+|+.|+......
T Consensus 5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~--~~~ell-~~~~id~v~I~tp~~~h~ 81 (181)
T d1zh8a1 5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD--SYEELL-ESGLVDAVDLTLPVELNL 81 (181)
T ss_dssp EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES--CHHHHH-HSSCCSEEEECCCGGGHH
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee--eeeccc-cccccceeeccccccccc
Confidence 5789999999964 466666543 3655 55677878777777688655542 322221 146799999999888777
Q ss_pred HHHHHHhccCCEEEEeCCCCCCcccChh------hHhc-cCcE-EEEeecC-C--HHHHHHHHHHHhcCCCc
Q 018158 263 GPILELLKVNGTLSVVGAPEAPFELPSF------PLIF-GKRS-VKGSMTG-G--MRETQEMMNVCGKYNIT 323 (360)
Q Consensus 263 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~------~~~~-~~~~-i~~~~~~-~--~~~~~~~~~~l~~~~l~ 323 (360)
..+..++..| .-+.+-.+ +..+.. .+.. ++.. ..++... . ...+..+.+++.+|++-
T Consensus 82 ~~~~~al~~g-k~V~~EKP---l~~~~~e~~~l~~~~~~~~~~~~v~~~~R~~~~~~~~~~~~~~i~~G~ig 149 (181)
T d1zh8a1 82 PFIEKALRKG-VHVICEKP---ISTDVETGKKVVELSEKSEKTVYIAENFRENSYQKEFEDFYQVVAEGKPN 149 (181)
T ss_dssp HHHHHHHHTT-CEEEEESS---SSSSHHHHHHHHHHHHHCSSCEEEECGGGCCHHHHHHHHHHHHHHSCCCC
T ss_pred cccccccccc-hhhhcCCC---CcCCHHHHHHHHHHHHHhCCeEEEEeeccccccCHHHHHHHHHHHCCCCc
Confidence 7887777776 44555332 222222 1221 2333 2333332 1 24577888888888763
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=94.10 E-value=0.053 Score=47.38 Aligned_cols=31 Identities=16% Similarity=0.189 Sum_probs=28.4
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEe
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIS 215 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~ 215 (360)
|++|||+|+ |-+|..++..+...|.+|++++
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD 32 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD 32 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence 678999999 9999999999999999999997
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=94.07 E-value=0.095 Score=43.39 Aligned_cols=38 Identities=16% Similarity=0.067 Sum_probs=29.6
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC-hhHHHHHH
Q 018158 188 IGIVGL-GGLGHVAVKFGKAFGHHVTVISTS-PSKEKEAK 225 (360)
Q Consensus 188 vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~-~~~~~~~~ 225 (360)
+||+|+ +++|.++++.+...|++|++.+++ +++.+.++
T Consensus 5 AlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~ 44 (284)
T d1e7wa_ 5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS 44 (284)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHH
Confidence 577899 999999999999999999987764 44444433
|
| >d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Putative spermidine synthetase PF0127 (SpeE) species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=94.02 E-value=0.14 Score=42.36 Aligned_cols=94 Identities=16% Similarity=0.229 Sum_probs=61.1
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC---------------eEeeCccHHHHHhcCCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD---------------EFILSTNAMQMQAGKRT 248 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~---------------~~v~~~~~~~~~~~~~~ 248 (360)
..++|||+|+|. |..+-.+++.-..+|++++.+++=.+.+++.++.. +++..+....+++ .++
T Consensus 72 ~p~~vLiiG~G~-G~~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da~~~l~~-~~~ 149 (276)
T d1mjfa_ 72 KPKRVLVIGGGD-GGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 149 (276)
T ss_dssp CCCEEEEEECTT-SHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCceEEEecCCc-hHHHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEChHHHHHhc-cCC
Confidence 668899998853 33445556654457999999998888887755321 2333333333333 578
Q ss_pred cCEEE-EcCCC---------cccHHHHHHHhccCCEEEEeC
Q 018158 249 LDFIL-DTVSA---------KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 249 ~d~vi-d~~g~---------~~~~~~~~~~l~~~G~~v~~g 279 (360)
+|+|| |.... ...+..+.+.|+++|.++.-+
T Consensus 150 yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~ 190 (276)
T d1mjfa_ 150 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 190 (276)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEec
Confidence 99997 44432 123678899999999987643
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=94.02 E-value=0.33 Score=35.84 Aligned_cols=72 Identities=19% Similarity=0.248 Sum_probs=46.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHH-HHHHH-----cCCCeE-eeCccHHHHHhcCCCcCEEEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEK-EAKEL-----LGADEF-ILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~-~~~~~-----~g~~~~-v~~~~~~~~~~~~~~~d~vid 254 (360)
.+.+|.|+|+|.+|...+..+...|. ++..++.++++.+ .+... +-...+ +-..+. +.-.+.|+++.
T Consensus 5 ~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~----~~l~daDvvvi 80 (148)
T d1ldna1 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY----DDCRDADLVVI 80 (148)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG----GGTTTCSEEEE
T ss_pred CCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH----HHhccceeEEE
Confidence 56789999999999988888887775 6999998877521 11110 111111 111111 22467999999
Q ss_pred cCCCc
Q 018158 255 TVSAK 259 (360)
Q Consensus 255 ~~g~~ 259 (360)
++|..
T Consensus 81 tag~~ 85 (148)
T d1ldna1 81 CAGAN 85 (148)
T ss_dssp CCSCC
T ss_pred ecccc
Confidence 98853
|
| >d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.95 E-value=0.13 Score=42.80 Aligned_cols=95 Identities=19% Similarity=0.240 Sum_probs=63.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcC--------CC-eEeeCccHHHHHhcCCCcCEEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLG--------AD-EFILSTNAMQMQAGKRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g--------~~-~~v~~~~~~~~~~~~~~~d~vi 253 (360)
..++|||+|+|. |..+-.+++..+. +|++++-+++-.+.+++.+. .. .++..+....++...+++|+||
T Consensus 78 ~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~Da~~~l~~~~~~yDvIi 156 (285)
T d2o07a1 78 NPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 156 (285)
T ss_dssp SCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEccHHHHHhcCCCCCCEEE
Confidence 568899998754 4556667776654 89999999988888877441 11 2333333344555567899997
Q ss_pred -EcCCC---------cccHHHHHHHhccCCEEEEeC
Q 018158 254 -DTVSA---------KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 254 -d~~g~---------~~~~~~~~~~l~~~G~~v~~g 279 (360)
|.... ...++.+.+.|+++|.++.-.
T Consensus 157 ~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~ 192 (285)
T d2o07a1 157 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 192 (285)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred EcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEec
Confidence 44321 123678889999999987654
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.94 E-value=0.023 Score=47.50 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=30.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChh
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS 219 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~ 219 (360)
.|+|+|+|+.|++++..++..|.+|.+++++++
T Consensus 4 ~V~IvGaGp~Gl~~A~~L~~~G~~v~vlE~~~~ 36 (292)
T d1k0ia1 4 QVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (292)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 489999999999999999999999999998753
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=93.86 E-value=0.075 Score=39.70 Aligned_cols=87 Identities=13% Similarity=0.171 Sum_probs=56.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHHHH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGPIL 266 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~ 266 (360)
+|-|+|.|.+|...+.-+...|.+|++.+++..+....+. .+.... +.. .+.....|+||-|+........+.
T Consensus 2 kIgiIG~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~-~~~~~~-~~~-----~e~~~~~diIi~~v~~~~~~~~~~ 74 (152)
T d1i36a2 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERA-RTVGVT-ETS-----EEDVYSCPVVISAVTPGVALGAAR 74 (152)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHH-HHHTCE-ECC-----HHHHHTSSEEEECSCGGGHHHHHH
T ss_pred EEEEEcHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhh-hccccc-ccH-----HHHHhhcCeEEEEecCchHHHHHH
Confidence 4778899999999999999899999999877766555544 232222 111 122356899999998765544443
Q ss_pred HHhcc-CCEEEEeCC
Q 018158 267 ELLKV-NGTLSVVGA 280 (360)
Q Consensus 267 ~~l~~-~G~~v~~g~ 280 (360)
..... +..++++..
T Consensus 75 ~~~~~~~~~~id~st 89 (152)
T d1i36a2 75 RAGRHVRGIYVDINN 89 (152)
T ss_dssp HHHTTCCSEEEECSC
T ss_pred hhcccCCceeeccCc
Confidence 33332 345555543
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=93.84 E-value=0.27 Score=36.87 Aligned_cols=85 Identities=20% Similarity=0.187 Sum_probs=57.8
Q ss_pred EEEEEcCChHHHH-HHHHHHHc-CCeEE-EEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHH
Q 018158 187 RIGIVGLGGLGHV-AVKFGKAF-GHHVT-VISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLG 263 (360)
Q Consensus 187 ~vlI~Gag~vG~~-aiqla~~~-G~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 263 (360)
++.|+|+|.+|.- .+..++.. +++++ +.+++.++.+.+.++++... ++ +.+.+ ...+|+|+.|+.......
T Consensus 3 ri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~-~~--~~~~l---~~~~D~V~I~tp~~~h~~ 76 (164)
T d1tlta1 3 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY-AD--SLSSL---AASCDAVFVHSSTASHFD 76 (164)
T ss_dssp EEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB-CS--SHHHH---HTTCSEEEECSCTTHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc-cc--cchhh---hhhcccccccccchhccc
Confidence 5789999999964 56666554 67755 45566777777666687642 22 22222 246999999998887778
Q ss_pred HHHHHhccCCEEEEe
Q 018158 264 PILELLKVNGTLSVV 278 (360)
Q Consensus 264 ~~~~~l~~~G~~v~~ 278 (360)
.+..+++.|-. +.+
T Consensus 77 ~~~~al~~gk~-V~~ 90 (164)
T d1tlta1 77 VVSTLLNAGVH-VCV 90 (164)
T ss_dssp HHHHHHHTTCE-EEE
T ss_pred cccccccccce-eec
Confidence 88888888754 445
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=93.82 E-value=0.31 Score=36.86 Aligned_cols=95 Identities=13% Similarity=0.241 Sum_probs=59.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCC--hhHHHHHHHHcCC------CeE--------e--------eCccHHHH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTS--PSKEKEAKELLGA------DEF--------I--------LSTNAMQM 242 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~--~~~~~~~~~~~g~------~~~--------v--------~~~~~~~~ 242 (360)
+|.|.|-|-+|.++.+++...+.+|.++-.. .+....+.+ +.. ..+ + ..+++...
T Consensus 2 kigINGfGRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl~-yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~i 80 (168)
T d2g82a1 2 KVGINGFGRIGRQVFRILHSRGVEVALINDLTDNKTLAHLLK-YDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKEI 80 (168)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHHH-CCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGGC
T ss_pred EEEEECCcHHHHHHHHHHhcCCCEEEEECCCcchhhhhheee-cccccCccccccccccceeEecceeEEEEecCChHHC
Confidence 5788999999999999988888887776643 223344433 321 001 0 11111111
Q ss_pred HhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 243 QAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 243 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.=...++|+|+||+|.....+.+...++.+-+-|.+..+.
T Consensus 81 ~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~ 120 (168)
T d2g82a1 81 PWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPA 120 (168)
T ss_dssp CTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred cccccCCceeEeccccccchHHhhhhhccccceeeecccc
Confidence 1114579999999998877788888888776555554443
|
| >d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.76 E-value=0.12 Score=44.11 Aligned_cols=96 Identities=15% Similarity=0.128 Sum_probs=61.7
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHH----------cCC----CeEeeC--ccHHHHHh
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKEL----------LGA----DEFILS--TNAMQMQA 244 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~----------~g~----~~~v~~--~~~~~~~~ 244 (360)
++++++++-+|+| .|..++++|+..++ ++++++.+++..+.+++. +|. -.++.. .+.. ...
T Consensus 149 l~~~~~vlD~GcG-~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~~~~-~~~ 226 (328)
T d1nw3a_ 149 MTDDDLFVDLGSG-VGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEE-WRE 226 (328)
T ss_dssp CCTTCEEEEETCT-TSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTTSHH-HHH
T ss_pred CCCCCEEEEcCCC-CCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcccccc-ccc
Confidence 5699999999986 48888899999888 699999999877666542 121 122211 1111 111
Q ss_pred cCCCcCEEEEcC-CC-c---ccHHHHHHHhccCCEEEEeC
Q 018158 245 GKRTLDFILDTV-SA-K---HSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 245 ~~~~~d~vid~~-g~-~---~~~~~~~~~l~~~G~~v~~g 279 (360)
.-..+|+|+-.. -. . ..+.++.+.|++||+++..-
T Consensus 227 ~~~~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~ 266 (328)
T d1nw3a_ 227 RIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK 266 (328)
T ss_dssp HHHHCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred ccCcceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence 122367887422 11 1 23567888899999998764
|
| >d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: BC2162-like domain: Methyltransferase BC2162 species: Bacillus cereus [TaxId: 1396]
Probab=93.55 E-value=0.07 Score=44.41 Aligned_cols=94 Identities=19% Similarity=0.195 Sum_probs=64.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHc---CCCeEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAF--GHHVTVISTSPSKEKEAKELL---GADEFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~--G~~V~~~~~~~~~~~~~~~~~---g~~~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
++.+||=+|+|. |..+..+++.. +.+|++++.+++.++.+++++ +.+..+...+.... ....++|+|+....-
T Consensus 27 ~~~~ILDiGcG~-G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~~-~~~~~fD~v~~~~~l 104 (281)
T d2gh1a1 27 KPVHIVDYGCGY-GYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI-ELNDKYDIAICHAFL 104 (281)
T ss_dssp SCCEEEEETCTT-THHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTTC-CCSSCEEEEEEESCG
T ss_pred CcCEEEEecCcC-CHHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccccccccc-cccCCceEEEEehhh
Confidence 778899899974 88888888875 568999999999888887753 22211211222111 124579999865432
Q ss_pred ------cccHHHHHHHhccCCEEEEeC
Q 018158 259 ------KHSLGPILELLKVNGTLSVVG 279 (360)
Q Consensus 259 ------~~~~~~~~~~l~~~G~~v~~g 279 (360)
...++.+.+.|++||.++..-
T Consensus 105 ~~~~d~~~~l~~~~~~LkpgG~lii~~ 131 (281)
T d2gh1a1 105 LHMTTPETMLQKMIHSVKKGGKIICFE 131 (281)
T ss_dssp GGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence 134788999999999998764
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=93.53 E-value=0.14 Score=41.40 Aligned_cols=34 Identities=24% Similarity=0.431 Sum_probs=31.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTS 217 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~ 217 (360)
.|++|+|.|.|.+|..+++++...|++|++++.+
T Consensus 30 ~g~~v~IqGfGnVG~~~a~~L~~~Gakvv~vsD~ 63 (242)
T d1v9la1 30 EGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDI 63 (242)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCeEEEeecc
Confidence 7999999999999999999999999999877743
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.52 E-value=0.036 Score=45.61 Aligned_cols=32 Identities=28% Similarity=0.209 Sum_probs=28.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCh
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSP 218 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~ 218 (360)
.|+|+|+|+.|++++.+++..|. +|.++++++
T Consensus 3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~ 35 (288)
T d3c96a1 3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSS 35 (288)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence 58999999999999999999997 788988764
|
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=93.46 E-value=0.12 Score=40.27 Aligned_cols=93 Identities=23% Similarity=0.175 Sum_probs=59.4
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCC----eEeeCccHHHHHhcCCCcCEEEE
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGAD----EFILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~----~~v~~~~~~~~~~~~~~~d~vid 254 (360)
..++++||=+|+|. |..++.+++ .+.+|++++.++...+.+++. .+.. .++..+..+. .....+|+|+-
T Consensus 50 ~~~~~~VLDiGcG~-G~~~~~la~-~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~--~~~~~fD~Ii~ 125 (194)
T d1dusa_ 50 VDKDDDILDLGCGY-GVIGIALAD-EVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN--VKDRKYNKIIT 125 (194)
T ss_dssp CCTTCEEEEETCTT-SHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT--CTTSCEEEEEE
T ss_pred cCCCCeEEEEeecC-ChhHHHHHh-hccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhh--hccCCceEEEE
Confidence 34899999998853 555666665 467999999999888777653 3321 1222211111 12467999996
Q ss_pred cCC---C----cccHHHHHHHhccCCEEEEe
Q 018158 255 TVS---A----KHSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 255 ~~g---~----~~~~~~~~~~l~~~G~~v~~ 278 (360)
... . ...++.+.+.|+++|+++.+
T Consensus 126 ~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 156 (194)
T d1dusa_ 126 NPPIRAGKEVLHRIIEEGKELLKDNGEIWVV 156 (194)
T ss_dssp CCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence 332 1 12367788899999988653
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=93.41 E-value=0.042 Score=46.66 Aligned_cols=34 Identities=35% Similarity=0.378 Sum_probs=30.9
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
.++|+|+|||..|+.++..+...|.+|++++.++
T Consensus 2 ~KKI~IIGaG~sGL~aA~~L~k~G~~V~viEk~~ 35 (314)
T d2bi7a1 2 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRD 35 (314)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCCEEEEECCC
Confidence 5789999999999999999888899999999775
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=93.38 E-value=0.051 Score=44.81 Aligned_cols=32 Identities=28% Similarity=0.211 Sum_probs=29.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
+|||+|+ |-+|..++..++..|.+|+++++++
T Consensus 3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~ 35 (281)
T d1vl0a_ 3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD 35 (281)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh
Confidence 5899999 9999999999999999999998764
|
| >d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermotoga maritima [TaxId: 2336]
Probab=93.38 E-value=0.11 Score=43.40 Aligned_cols=96 Identities=19% Similarity=0.228 Sum_probs=63.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCC--------C-eEeeCccHHHHHhcCCCcCEEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGA--------D-EFILSTNAMQMQAGKRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~--------~-~~v~~~~~~~~~~~~~~~d~vi 253 (360)
..++|||+|+|. |..+-.+++..+. +|++++.+++-.+.+++.++. . .++..+....++...+++|+||
T Consensus 89 ~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDvIi 167 (295)
T d1inla_ 89 NPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 167 (295)
T ss_dssp SCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEhhhHHHHHhcCCCCCCEEE
Confidence 458899998854 4446677776654 799999999988877774421 1 3333333344555577899997
Q ss_pred -EcCC----------CcccHHHHHHHhccCCEEEEeCC
Q 018158 254 -DTVS----------AKHSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 254 -d~~g----------~~~~~~~~~~~l~~~G~~v~~g~ 280 (360)
|+.. ....+..+.+.|+++|.++.-..
T Consensus 168 ~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~~ 205 (295)
T d1inla_ 168 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 205 (295)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEecC
Confidence 4332 11236788999999999987643
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=93.34 E-value=0.15 Score=43.22 Aligned_cols=96 Identities=17% Similarity=0.112 Sum_probs=60.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCC--eEeeCccHHH---HHhcCCCcCEEEEc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGAD--EFILSTNAMQ---MQAGKRTLDFILDT 255 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~--~~v~~~~~~~---~~~~~~~~d~vid~ 255 (360)
+|++||=+++|+ |..++++|+ .+.+|+.++.++..++.+++. .|.+ .++..+..+. ....+..||+|+--
T Consensus 145 ~g~rVLDl~~gt-G~~s~~~a~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~~~~~~~~~fD~Vi~D 222 (318)
T d1wxxa2 145 RGERALDVFSYA-GGFALHLAL-GFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 222 (318)
T ss_dssp CEEEEEEETCTT-THHHHHHHH-HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeeeccCCCC-cHHHHHHHh-cCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhhhhHhhhcCCCEEEEc
Confidence 789998887743 333455664 356899999999988888765 3443 2232222222 23336789999842
Q ss_pred CC-----Cc----------ccHHHHHHHhccCCEEEEeCCC
Q 018158 256 VS-----AK----------HSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 256 ~g-----~~----------~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
.+ .. ..+..+.+++++||.++....+
T Consensus 223 pP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs 263 (318)
T d1wxxa2 223 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 263 (318)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 22 11 1345777889999999887543
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=93.31 E-value=0.051 Score=41.40 Aligned_cols=35 Identities=31% Similarity=0.387 Sum_probs=30.1
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCCh
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSP 218 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~ 218 (360)
.|++|+|+|+|..|+.+++.++..+. +|+++++++
T Consensus 1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 47899999999999999998888874 789888665
|
| >d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Caenorhabditis elegans [TaxId: 6239]
Probab=93.28 E-value=0.25 Score=41.51 Aligned_cols=96 Identities=23% Similarity=0.255 Sum_probs=63.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCC--------C-eEeeCccHHHHHhcCCCcCEEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGA--------D-EFILSTNAMQMQAGKRTLDFIL 253 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~--------~-~~v~~~~~~~~~~~~~~~d~vi 253 (360)
..++|||+|+|. |..+-.++++... +|++++.+++=.+.+++.+.. . .++..+....++...+++|+||
T Consensus 106 ~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~~~~~yDvII 184 (312)
T d2b2ca1 106 DPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 184 (312)
T ss_dssp SCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHHHhCCCCCCEEE
Confidence 567899998854 4455577777665 799999999988888885432 1 2222222244455577899998
Q ss_pred EcCCC----------cccHHHHHHHhccCCEEEEeCC
Q 018158 254 DTVSA----------KHSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 254 d~~g~----------~~~~~~~~~~l~~~G~~v~~g~ 280 (360)
--... ..-++.+.++|+++|.++.-+.
T Consensus 185 ~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~~ 221 (312)
T d2b2ca1 185 TDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGE 221 (312)
T ss_dssp ECCC-------------HHHHHHHHEEEEEEEEEECC
T ss_pred EcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEecC
Confidence 42211 1236788889999999987653
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=93.26 E-value=0.11 Score=44.18 Aligned_cols=72 Identities=17% Similarity=0.079 Sum_probs=46.6
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC----hhHHHHHHHHc--CCCeE-eeCccHHHHHhc--CCCcCEEEEcC
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTS----PSKEKEAKELL--GADEF-ILSTNAMQMQAG--KRTLDFILDTV 256 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~----~~~~~~~~~~~--g~~~~-v~~~~~~~~~~~--~~~~d~vid~~ 256 (360)
+|||+|+ |-+|..++..+...|.+|+++++. ........... +...+ .|-.+.+.+... ..++|+||.++
T Consensus 2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHlA 81 (338)
T d1udca_ 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFA 81 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEECC
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEECC
Confidence 5899999 999999999999999999999752 22223222211 22222 233344444433 35899999987
Q ss_pred CC
Q 018158 257 SA 258 (360)
Q Consensus 257 g~ 258 (360)
+.
T Consensus 82 a~ 83 (338)
T d1udca_ 82 GL 83 (338)
T ss_dssp SC
T ss_pred Cc
Confidence 63
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=93.24 E-value=0.16 Score=36.63 Aligned_cols=89 Identities=11% Similarity=0.061 Sum_probs=59.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeE-eeCccHHHHHhc-CCCcCEEEEcCCCccc---
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEF-ILSTNAMQMQAG-KRTLDFILDTVSAKHS--- 261 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~-~~~~d~vid~~g~~~~--- 261 (360)
.++|+|.|.+|..+++.++ +..|.+++.++++.+.+.. .|...+ -|..+.+.+... -..++.++-++.....
T Consensus 2 HivI~G~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~-~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~~d~~n~~ 78 (129)
T d2fy8a1 2 HVVICGWSESTLECLRELR--GSEVFVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVNLESDSETIH 78 (129)
T ss_dssp CEEEESCCHHHHHHHHTSC--GGGEEEEESCTTHHHHHHH-TTCEEEESCTTSHHHHHHTTCTTCSEEEECCSSHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHc--CCCCEEEEcchHHHHHHHh-cCccccccccCCHHHHHHhhhhcCcEEEEeccchhhhHH
Confidence 5789999999998888775 4568888999998888877 775433 244455555554 4678999988876532
Q ss_pred HHHHHHHhccCCEEEEe
Q 018158 262 LGPILELLKVNGTLSVV 278 (360)
Q Consensus 262 ~~~~~~~l~~~G~~v~~ 278 (360)
.....+.+.+..+++..
T Consensus 79 ~~~~~r~~~~~~~iia~ 95 (129)
T d2fy8a1 79 CILGIRKIDESVRIIAE 95 (129)
T ss_dssp HHHHHHHHCSSSCEEEE
T ss_pred HHHHHHHHCCCceEEEE
Confidence 12333444555555444
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.23 E-value=0.1 Score=40.98 Aligned_cols=40 Identities=35% Similarity=0.427 Sum_probs=35.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKE 226 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~ 226 (360)
+|.|+|.|-+|+..+..+...|.+|++++.++++.+.+.+
T Consensus 2 kI~ViGlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~ 41 (202)
T d1mv8a2 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQ 41 (202)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred EEEEECCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcc
Confidence 4788999999998888887889999999999988887765
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=93.16 E-value=0.042 Score=44.92 Aligned_cols=34 Identities=29% Similarity=0.366 Sum_probs=30.0
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChh
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPS 219 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~ 219 (360)
+.+||+|+ +++|.++++.+...|++|++++++++
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~ 36 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA 36 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence 46789999 99999999999999999999998753
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.13 E-value=0.052 Score=45.94 Aligned_cols=35 Identities=26% Similarity=0.395 Sum_probs=31.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
+..+|+|+|+|..|+.++..+...|.+|++++.++
T Consensus 4 ~~~kViVIGaG~aGL~aA~~L~~~G~~V~VlEa~~ 38 (449)
T d2dw4a2 4 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARD 38 (449)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 56779999999999999999999999999999654
|
| >d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Aclacinomycin-10-hydroxylase RdmB species: Streptomyces purpurascens [TaxId: 1924]
Probab=93.11 E-value=0.13 Score=42.05 Aligned_cols=97 Identities=16% Similarity=0.137 Sum_probs=60.7
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHH---cCCCeEeeCccHHHHHhcCCCcCEEEEcCC
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKEL---LGADEFILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~---~g~~~~v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
+...++||=+|+|. |..+..+++.. +.++++++. ++-.+.++++ .|....+.....+.......++|+++-..-
T Consensus 79 ~~~~~~vlDvG~G~-G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~d~~~~~p~~~D~v~~~~v 156 (256)
T d1qzza2 79 WSAVRHVLDVGGGN-GGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSFV 156 (256)
T ss_dssp CTTCCEEEEETCTT-SHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCCEEEEEEESC
T ss_pred CccCCEEEEECCCC-CHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeeeeeccccccccchhhhcccc
Confidence 44778888888853 78888888877 679999996 5444444332 343211111111122223457899875432
Q ss_pred -----Cc---ccHHHHHHHhccCCEEEEeCC
Q 018158 258 -----AK---HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 258 -----~~---~~~~~~~~~l~~~G~~v~~g~ 280 (360)
.. ..++.+.+.|++||+++.+..
T Consensus 157 Lh~~~d~~~~~lL~~i~~~LkpgG~llI~d~ 187 (256)
T d1qzza2 157 LLNWSDEDALTILRGCVRALEPGGRLLVLDR 187 (256)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence 11 246788899999999998764
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=93.08 E-value=0.17 Score=38.84 Aligned_cols=81 Identities=17% Similarity=0.142 Sum_probs=51.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChh--HHHHHHHHcCCC---------eEeeCccHHHHHhcCCCcCEEEEc
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS--KEKEAKELLGAD---------EFILSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~--~~~~~~~~~g~~---------~~v~~~~~~~~~~~~~~~d~vid~ 255 (360)
+|.|+|+|..|.+.+..+-..|.+|+...|+.+ ..+.+.+ -.-. ..+.. .+...+.-...|+++.+
T Consensus 2 kI~ViGaG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~-~~~~~~~~~~~~~~~i~~--~~~~~~~~~~ad~Ii~a 78 (180)
T d1txga2 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISA-GREHPRLGVKLNGVEIFW--PEQLEKCLENAEVVLLG 78 (180)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHT-TCCBTTTTBCCCSEEEEC--GGGHHHHHTTCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhh-hhhhhhhcchhccccccc--cccHHHHHhccchhhcc
Confidence 578999999999988888888999999987533 3333332 1100 00111 12233345689999999
Q ss_pred CCCcccHHHHHHHhcc
Q 018158 256 VSAKHSLGPILELLKV 271 (360)
Q Consensus 256 ~g~~~~~~~~~~~l~~ 271 (360)
+... .+...++.+.+
T Consensus 79 vps~-~~~~~~~~l~~ 93 (180)
T d1txga2 79 VSTD-GVLPVMSRILP 93 (180)
T ss_dssp SCGG-GHHHHHHHHTT
T ss_pred cchh-hhHHHHHhhcc
Confidence 9876 35666665544
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=93.08 E-value=0.062 Score=38.53 Aligned_cols=35 Identities=23% Similarity=0.171 Sum_probs=32.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
.+++++|+|+|.+|+-+++.+..+|.+|+++.+++
T Consensus 31 ~~~~vvIiGgG~iG~E~A~~l~~~g~~Vtlv~~~~ 65 (122)
T d1xhca2 31 NSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA 65 (122)
T ss_dssp HHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCcEEEECCcHHHHHHHHHhhcccceEEEEeccc
Confidence 56889999999999999999999999999999764
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=93.05 E-value=0.073 Score=44.04 Aligned_cols=74 Identities=18% Similarity=0.297 Sum_probs=48.4
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhH------HHHHHHH--cCCCeEe-eCccHHHHHhcCCCcCEEEEc
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSK------EKEAKEL--LGADEFI-LSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~------~~~~~~~--~g~~~~v-~~~~~~~~~~~~~~~d~vid~ 255 (360)
++|||+|+ |-+|..++..+...|.+|++++|+... ...+... .+.+.+. |..+.......-.+.+.++.+
T Consensus 4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi~~ 83 (307)
T d1qyca_ 4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIST 83 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeeeec
Confidence 67999999 999999999999999999999986432 2222221 1232221 333333333344578888888
Q ss_pred CCCc
Q 018158 256 VSAK 259 (360)
Q Consensus 256 ~g~~ 259 (360)
.+..
T Consensus 84 ~~~~ 87 (307)
T d1qyca_ 84 VGSL 87 (307)
T ss_dssp CCGG
T ss_pred cccc
Confidence 8643
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=93.02 E-value=0.41 Score=34.71 Aligned_cols=75 Identities=21% Similarity=0.267 Sum_probs=46.9
Q ss_pred EEEEEcC-ChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHH
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGP 264 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~ 264 (360)
+|.|.|+ |-+|..++++.... ++++.+.....+..... ...++|++||++.-. ....
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~--------------------~~~~~DvvIDFS~p~-~~~~ 59 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLL--------------------TDGNTEVVIDFTHPD-VVMG 59 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHH--------------------HTTTCSEEEECCCTT-THHH
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhh--------------------ccccCCEEEEcccHH-HHHH
Confidence 5889998 99999988887654 66755443222111111 134678888888554 4455
Q ss_pred HHHHhccCCEEEEeCCCC
Q 018158 265 ILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 265 ~~~~l~~~G~~v~~g~~~ 282 (360)
.++.+...|.-+.+|...
T Consensus 60 ~~~~~~~~~~~~ViGTTG 77 (135)
T d1yl7a1 60 NLEFLIDNGIHAVVGTTG 77 (135)
T ss_dssp HHHHHHHTTCEEEECCCC
T ss_pred HHHHHHhcCCCEEEeccc
Confidence 556666666666666543
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=92.99 E-value=0.14 Score=43.56 Aligned_cols=40 Identities=15% Similarity=-0.017 Sum_probs=32.3
Q ss_pred CcEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCChhHHHHH
Q 018158 185 KKRIGIVGL---GGLGHVAVKFGKAFGHHVTVISTSPSKEKEA 224 (360)
Q Consensus 185 ~~~vlI~Ga---g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~ 224 (360)
++.+||+|+ .++|.++++.+-..|++|+++.++.......
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~ 44 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFM 44 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHH
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhh
Confidence 577899995 3899999999999999999998776644433
|
| >d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Carminomycin 4-O-methyltransferase species: Streptomyces peucetius [TaxId: 1950]
Probab=92.90 E-value=0.096 Score=42.74 Aligned_cols=97 Identities=16% Similarity=0.131 Sum_probs=59.8
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHH---cCCCeEeeCccHHHHHhcCCCcCEEEEcCC
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKEL---LGADEFILSTNAMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~---~g~~~~v~~~~~~~~~~~~~~~d~vid~~g 257 (360)
+...++||=+|+| .|..++.+++.. +.++++++. ++..+.++++ .|....+.....+.......++|+|+-..-
T Consensus 78 ~~~~~~VLDvGcG-~G~~~~~la~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~rv~~~~~D~~~~~~~~~D~v~~~~v 155 (253)
T d1tw3a2 78 WTNVRHVLDVGGG-KGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAIILSFV 155 (253)
T ss_dssp CTTCSEEEEETCT-TSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSSCEEEEEEESC
T ss_pred CccCCEEEEeCCC-CCHHHHHHHHhcceeEEEEccC-HHHHHHHHHHHHHhhcccchhhccccchhhcccchhheeeccc
Confidence 4478899999986 377888888876 568999986 4444444332 342211111111111223457999985432
Q ss_pred -----Cc---ccHHHHHHHhccCCEEEEeCC
Q 018158 258 -----AK---HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 258 -----~~---~~~~~~~~~l~~~G~~v~~g~ 280 (360)
.. ..++.+.+.|++||+++..-.
T Consensus 156 lh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~ 186 (253)
T d1tw3a2 156 LLNWPDHDAVRILTRCAEALEPGGRILIHER 186 (253)
T ss_dssp GGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred cccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence 11 236788999999999987643
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=92.85 E-value=0.067 Score=44.75 Aligned_cols=37 Identities=30% Similarity=0.296 Sum_probs=32.8
Q ss_pred CCcEEEEEcC-C--hHHHHHHHHHHHcCCeEEEEeCChhH
Q 018158 184 AKKRIGIVGL-G--GLGHVAVKFGKAFGHHVTVISTSPSK 220 (360)
Q Consensus 184 ~~~~vlI~Ga-g--~vG~~aiqla~~~G~~V~~~~~~~~~ 220 (360)
.|+++||+|+ | ++|.+.++.+...|++|++.++++..
T Consensus 7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~ 46 (297)
T d1d7oa_ 7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPAL 46 (297)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhh
Confidence 6899999998 5 89999999999999999999877653
|
| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=92.85 E-value=0.54 Score=35.54 Aligned_cols=91 Identities=14% Similarity=0.193 Sum_probs=53.8
Q ss_pred CCcEEEEEcC--ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCC-CeEeeCccHHHH---HhcCCCcCEEEE
Q 018158 184 AKKRIGIVGL--GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGA-DEFILSTNAMQM---QAGKRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Ga--g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~-~~~v~~~~~~~~---~~~~~~~d~vid 254 (360)
+|.+||=.++ |.+| +..+ ..|++|+.++.+++..+.+++. +|. +.+......... ......+|+||-
T Consensus 41 ~g~~vLDl~~G~G~~~---i~a~-~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~If~ 116 (171)
T d1ws6a1 41 RRGRFLDPFAGSGAVG---LEAA-SEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFM 116 (171)
T ss_dssp TCCEEEEETCSSCHHH---HHHH-HTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeccccchhh---hhhh-hccchhhhcccCHHHHhhhhHHHHhhccccceeeeehhcccccccccCCccceeEE
Confidence 7888888766 5544 3433 3589999999999987766543 554 344443333221 223567999974
Q ss_pred cC----CCcccHHHHHH--HhccCCEEEEe
Q 018158 255 TV----SAKHSLGPILE--LLKVNGTLSVV 278 (360)
Q Consensus 255 ~~----g~~~~~~~~~~--~l~~~G~~v~~ 278 (360)
-- +....+..++. +++++|.++.-
T Consensus 117 DPPY~~~~~~~l~~l~~~~ll~~~g~ivie 146 (171)
T d1ws6a1 117 APPYAMDLAALFGELLASGLVEAGGLYVLQ 146 (171)
T ss_dssp CCCTTSCTTHHHHHHHHHTCEEEEEEEEEE
T ss_pred ccccccCHHHHHHHHHHcCCcCCCeEEEEE
Confidence 22 22223343333 47778876643
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=92.83 E-value=0.26 Score=41.70 Aligned_cols=97 Identities=26% Similarity=0.225 Sum_probs=60.5
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHH---cCCC---eEeeCccHHHH---HhcCCCcCEE
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKEL---LGAD---EFILSTNAMQM---QAGKRTLDFI 252 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~~~~~---~~~~~~~d~v 252 (360)
++|++||=.++|. |..++.+|+. |+ +|+.++.+++..+.+++. .|.. +++..+-.+.. ...+..||+|
T Consensus 144 ~~g~~VLDl~~g~-G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~~~~~~fD~V 221 (324)
T d2as0a2 144 QPGDRVLDVFTYT-GGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIV 221 (324)
T ss_dssp CTTCEEEETTCTT-THHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCCeeecccCcc-cchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhhhhHHHHhccCCCCch
Confidence 4899998877632 3344445544 66 799999999988877664 3432 22222222222 2236789999
Q ss_pred EEcCCCc---------------ccHHHHHHHhccCCEEEEeCCC
Q 018158 253 LDTVSAK---------------HSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 253 id~~g~~---------------~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
+--.... ..+..+.+++++||.++.....
T Consensus 222 i~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s 265 (324)
T d2as0a2 222 VLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 265 (324)
T ss_dssp EECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred hcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 8533211 1356677889999999887543
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=92.83 E-value=0.042 Score=44.63 Aligned_cols=32 Identities=25% Similarity=0.296 Sum_probs=28.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCh
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSP 218 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~ 218 (360)
+|+|+|+|+.|+.++..+...|. +|+++++++
T Consensus 2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~ 34 (347)
T d1b5qa1 2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD 34 (347)
T ss_dssp CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 38999999999999999999997 599999764
|
| >d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=92.81 E-value=0.29 Score=40.67 Aligned_cols=96 Identities=11% Similarity=0.250 Sum_probs=64.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcC--------CC-eEeeCccHHHHHhc-CCCcCEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLG--------AD-EFILSTNAMQMQAG-KRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g--------~~-~~v~~~~~~~~~~~-~~~~d~v 252 (360)
..++|||+|.|. |.++-.+++..+. +|++++.+++-.+.+++.++ .. .++..+....+... .+++|+|
T Consensus 80 ~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~Da~~~l~~~~~~~yDvI 158 (290)
T d1xj5a_ 80 NPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 158 (290)
T ss_dssp CCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEccHHHHHhhccccCccEE
Confidence 557899998754 4555677777675 79999999998888877442 11 23333333444444 4589988
Q ss_pred E-EcCCC---------cccHHHHHHHhccCCEEEEeCC
Q 018158 253 L-DTVSA---------KHSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 253 i-d~~g~---------~~~~~~~~~~l~~~G~~v~~g~ 280 (360)
| |+... ...++.+.++|+++|.++.-..
T Consensus 159 i~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~~ 196 (290)
T d1xj5a_ 159 IVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAE 196 (290)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEecC
Confidence 7 44421 1237889999999999987643
|
| >d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=92.67 E-value=0.028 Score=43.79 Aligned_cols=34 Identities=18% Similarity=0.254 Sum_probs=30.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTS 217 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~ 217 (360)
++..|+|+|+|+.|+.++..+.+.|.+|+++++.
T Consensus 4 k~~dVvIIGGGpaGl~AA~~~ar~g~~v~iie~~ 37 (190)
T d1trba1 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM 37 (190)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEEee
Confidence 5678999999999999999999999999999754
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.48 E-value=0.23 Score=42.27 Aligned_cols=73 Identities=12% Similarity=0.054 Sum_probs=46.4
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCh----hHHHHHHHH--cCCCeE-eeCccHHHHHhc--CCCcCEEEEc
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSP----SKEKEAKEL--LGADEF-ILSTNAMQMQAG--KRTLDFILDT 255 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~----~~~~~~~~~--~g~~~~-v~~~~~~~~~~~--~~~~d~vid~ 255 (360)
+.|||+|+ |-+|..++..+...|.+|+++++.. +........ -+.+.+ .|-.+.+.+... ..++|+||.+
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 81 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF 81 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence 57899999 9999999888888999999987421 122222221 122212 233444444332 4589999998
Q ss_pred CCC
Q 018158 256 VSA 258 (360)
Q Consensus 256 ~g~ 258 (360)
++.
T Consensus 82 Aa~ 84 (347)
T d1z45a2 82 AGL 84 (347)
T ss_dssp CSC
T ss_pred ccc
Confidence 874
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=92.48 E-value=0.11 Score=44.69 Aligned_cols=73 Identities=15% Similarity=0.059 Sum_probs=43.1
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChh-----HHHHHHHH---cCCCeEe---eCccHHHHHhc--CCCcCE
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPS-----KEKEAKEL---LGADEFI---LSTNAMQMQAG--KRTLDF 251 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~-----~~~~~~~~---~g~~~~v---~~~~~~~~~~~--~~~~d~ 251 (360)
+.+||+|+ |-+|..++..+...|.+|+++++... +.+.+... ......+ |-.+...+... +.++|+
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE 81 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence 67899999 99999999999889999999998543 22222110 0111111 22333333333 346799
Q ss_pred EEEcCCC
Q 018158 252 ILDTVSA 258 (360)
Q Consensus 252 vid~~g~ 258 (360)
|+.+++.
T Consensus 82 v~h~aa~ 88 (357)
T d1db3a_ 82 VYNLGAM 88 (357)
T ss_dssp EEECCCC
T ss_pred EEEeecc
Confidence 9999864
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=92.39 E-value=0.056 Score=44.12 Aligned_cols=33 Identities=24% Similarity=0.293 Sum_probs=29.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChh
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS 219 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~ 219 (360)
.|+|+|+|+.|++++..|...|.+|.++++++.
T Consensus 6 DViIIGaG~aGl~aA~~la~~G~~V~vlEk~~~ 38 (253)
T d2gqfa1 6 ENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKK 38 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred cEEEECcCHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 488999999999988888888999999998764
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=92.37 E-value=0.056 Score=43.77 Aligned_cols=32 Identities=19% Similarity=0.226 Sum_probs=28.4
Q ss_pred EEEEcCChHHHHHHHHHHHcCCeEEEEeCChh
Q 018158 188 IGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS 219 (360)
Q Consensus 188 vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~ 219 (360)
|+|+|+|+.|++++..+...|.+|+++++++.
T Consensus 5 ViIIGaG~aGl~aA~~la~~G~~V~liEk~~~ 36 (251)
T d2i0za1 5 VIVIGGGPSGLMAAIGAAEEGANVLLLDKGNK 36 (251)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 78999999999888888888999999997653
|
| >d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermus thermophilus [TaxId: 274]
Probab=92.31 E-value=0.28 Score=41.22 Aligned_cols=94 Identities=16% Similarity=0.197 Sum_probs=63.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcC-----C-----CeEeeCccHHHHHhcCCCcCEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLG-----A-----DEFILSTNAMQMQAGKRTLDFI 252 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g-----~-----~~~v~~~~~~~~~~~~~~~d~v 252 (360)
..++|||+|+|. |..+-++++... .+|++++.+++-.+.+++.|. + -.++..+....++...+++|+|
T Consensus 77 ~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~~Da~~~l~~~~~~yDvI 155 (312)
T d1uira_ 77 EPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (312)
T ss_dssp CCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEEchHHHHhhhcCCcccEE
Confidence 567899998854 555666777654 489999999998888877542 1 1333333334455557789999
Q ss_pred E-EcC---CCc---------ccHHHHHHHhccCCEEEEe
Q 018158 253 L-DTV---SAK---------HSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 253 i-d~~---g~~---------~~~~~~~~~l~~~G~~v~~ 278 (360)
| |.. +.. ..++.+.+.|+++|.++.-
T Consensus 156 i~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~ 194 (312)
T d1uira_ 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ 194 (312)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred EEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEe
Confidence 7 442 211 2357888999999988753
|
| >d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Human(Homo sapiens), liver isoform [TaxId: 9606]
Probab=92.14 E-value=0.85 Score=34.32 Aligned_cols=95 Identities=9% Similarity=0.163 Sum_probs=59.3
Q ss_pred EEEEEcCChHHHHHHHHHHHc-CCeEEEEeC---ChhHHHHHHHHcCC------CeE--------eeCcc-----HHHHH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAF-GHHVTVIST---SPSKEKEAKELLGA------DEF--------ILSTN-----AMQMQ 243 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~---~~~~~~~~~~~~g~------~~~--------v~~~~-----~~~~~ 243 (360)
+|.|.|-|-+|.++..++... ..++.++-. +.+.+..+.+ +-. ..+ ++.+. .....
T Consensus 3 kIgINGFGRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLlk-yDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~p~ 81 (169)
T d1u8fo1 3 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQ-YDSTHGKFHGTVKAENGKLVINGNPITIFQERDPS 81 (169)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHH-CCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred EEEEECCcHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHHh-hccccCCcCCeEEEECCEEEECCEEEEEEECCChh
Confidence 578999999999998777655 467666643 3455666655 321 111 11110 00111
Q ss_pred hc---CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 244 AG---KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 244 ~~---~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
++ ..++|+|+||+|.......+...+..|-+-|.+..+.
T Consensus 82 ~i~W~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~ 123 (169)
T d1u8fo1 82 KIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPS 123 (169)
T ss_dssp GCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCC
T ss_pred hCCccccCCCEEEEecceeccHHHHHHHHhcCCceEeecccc
Confidence 11 4589999999998766677777888886666665544
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=92.11 E-value=0.051 Score=45.03 Aligned_cols=32 Identities=19% Similarity=0.313 Sum_probs=29.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
+|+|+|+|..|+.++..+...|.+|++++.++
T Consensus 2 ~V~IIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 33 (347)
T d2ivda1 2 NVAVVGGGISGLAVAHHLRSRGTDAVLLESSA 33 (347)
T ss_dssp CEEEECCBHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 48999999999999999999999999999764
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=92.09 E-value=0.22 Score=42.03 Aligned_cols=89 Identities=19% Similarity=0.143 Sum_probs=52.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHH---HcCC-C--eEeeCccHHHHHhcCCCcCEEEEcC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKE---LLGA-D--EFILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~---~~g~-~--~~v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
+|++||-+|+|. |.+++.+|+ .|+ +|++++.++.- ..+++ +.+. + .++..+ ..........+|+|+...
T Consensus 33 ~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~-~~a~~~~~~n~~~~~v~~~~~~-~~~~~~~~~~~D~ivs~~ 108 (316)
T d1oria_ 33 KDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSIS-DYAVKIVKANKLDHVVTIIKGK-VEEVELPVEKVDIIISEW 108 (316)
T ss_dssp TTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTH-HHHHHHHHHTTCTTTEEEEESC-TTTCCCSSSCEEEEEECC
T ss_pred CcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHH-hhhhhHHHHhCCccccceEecc-HHHcccccceeEEEeeee
Confidence 899999999974 777776666 576 69999987642 22222 1342 2 222221 112222246799997532
Q ss_pred CC-----c----ccHHHHHHHhccCCEEE
Q 018158 257 SA-----K----HSLGPILELLKVNGTLS 276 (360)
Q Consensus 257 g~-----~----~~~~~~~~~l~~~G~~v 276 (360)
-. + ..+....++|+++|+++
T Consensus 109 ~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii 137 (316)
T d1oria_ 109 MGYCLFYESMLNTVLHARDKWLAPDGLIF 137 (316)
T ss_dssp CBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred eeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence 21 1 12345567999999874
|
| >d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains species: Escherichia coli [TaxId: 562]
Probab=92.05 E-value=0.073 Score=40.81 Aligned_cols=31 Identities=23% Similarity=0.323 Sum_probs=28.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTS 217 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~ 217 (360)
-|+|+|+|+.|+.++..|.+.|.+|.++++.
T Consensus 3 DViIIGgGpaGl~AAi~aar~G~~v~iie~~ 33 (184)
T d1fl2a1 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGER 33 (184)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred cEEEECcCHHHHHHHHHHHHcCCeEEEEEEe
Confidence 3789999999999999999999999999853
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=92.02 E-value=0.3 Score=38.00 Aligned_cols=67 Identities=19% Similarity=0.218 Sum_probs=46.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
.|++||=.|+|. |.+++.+++ .|+ +|+.++.+++..+.+++......++..+ +....+++|+||-.-
T Consensus 48 ~Gk~VLDlGcGt-G~l~i~a~~-~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D----~~~l~~~fD~Vi~NP 115 (197)
T d1ne2a_ 48 GGRSVIDAGTGN-GILACGSYL-LGAESVTAFDIDPDAIETAKRNCGGVNFMVAD----VSEISGKYDTWIMNP 115 (197)
T ss_dssp BTSEEEEETCTT-CHHHHHHHH-TTBSEEEEEESCHHHHHHHHHHCTTSEEEECC----GGGCCCCEEEEEECC
T ss_pred CCCEEEEeCCCC-cHHHHHHHH-cCCCcccccccCHHHHHHHHHccccccEEEEe----hhhcCCcceEEEeCc
Confidence 689999998853 555554444 565 6999999999999988865544444432 233467899998643
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.92 E-value=0.071 Score=42.65 Aligned_cols=32 Identities=16% Similarity=0.130 Sum_probs=28.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
-|+|+|+|..|+.++..+...|.+|.++++++
T Consensus 7 DviViGaG~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 7 DVIVLGTGITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 38999999999998888888899999999865
|
| >d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Ornithine cyclodeaminase species: Pseudomonas putida [TaxId: 303]
Probab=91.86 E-value=0.22 Score=42.41 Aligned_cols=94 Identities=14% Similarity=0.200 Sum_probs=64.8
Q ss_pred CCcEEEEEcCChHHHHHHHHHH-HcCC-eEEEEeCChhHHHHHHHHcCCC---eEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGK-AFGH-HVTVISTSPSKEKEAKELLGAD---EFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~-~~G~-~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
..+++.|+|+|..+...++... .++. +|.+.++++++.+.+.+++... .+....+ .++.-++.|+++-|+..
T Consensus 127 da~~l~iiG~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~s---~~eav~~ADIi~t~Tas 203 (340)
T d1x7da_ 127 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASS---VAEAVKGVDIITTVTAD 203 (340)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSS---HHHHHTTCSEEEECCCC
T ss_pred CCceEEEEcccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecCC---HHHHHhcCCceeecccc
Confidence 4578999999999988777554 5677 6999999998877666555421 2222222 33446789999987754
Q ss_pred cc---cHHHHHHHhccCCEEEEeCCCC
Q 018158 259 KH---SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 259 ~~---~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.. .+. -+++++|-++..+|...
T Consensus 204 ~s~~Pv~~--~~~l~pG~hI~aiGs~~ 228 (340)
T d1x7da_ 204 KAYATIIT--PDMLEPGMHLNAVGGDC 228 (340)
T ss_dssp SSEEEEEC--GGGCCTTCEEEECSCCB
T ss_pred CCCCcccc--hhhcCCCCEEeecccch
Confidence 31 222 26899999999999765
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=91.84 E-value=0.067 Score=41.01 Aligned_cols=34 Identities=24% Similarity=0.122 Sum_probs=28.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTS 217 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~ 217 (360)
.+++|+|+|+|.+|+-++..++.+|.+|.++...
T Consensus 2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v~v~~~~ 35 (185)
T d1q1ra1 2 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVG 35 (185)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHcCCceEEEEec
Confidence 6789999999999999999999999875555433
|
| >d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Archaeal alanine dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=91.76 E-value=0.63 Score=39.15 Aligned_cols=93 Identities=13% Similarity=0.205 Sum_probs=64.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHH-cCC-eEEEEeCChhHHHHHHHHc---CCCeEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKA-FGH-HVTVISTSPSKEKEAKELL---GADEFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~-~G~-~V~~~~~~~~~~~~~~~~~---g~~~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
..+++.|+|+|..+...++.+.. +.. +|.+..+++++.+.+.+.+ +.....+.. +.-.+.|+|+-|+..
T Consensus 124 ~~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~~------~a~~~aDiV~taT~s 197 (320)
T d1omoa_ 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPA------EEASRCDVLVTTTPS 197 (320)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCH------HHHTSSSEEEECCCC
T ss_pred CccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccchh------hhhccccEEEEeccC
Confidence 45788999999999887776665 455 6999999999876665533 333332221 123579999999886
Q ss_pred cccHHHHHHHhccCCEEEEeCCCCC
Q 018158 259 KHSLGPILELLKVNGTLSVVGAPEA 283 (360)
Q Consensus 259 ~~~~~~~~~~l~~~G~~v~~g~~~~ 283 (360)
...+-.. +++++|-++..+|....
T Consensus 198 ~~P~~~~-~~l~~G~hv~~iGs~~p 221 (320)
T d1omoa_ 198 RKPVVKA-EWVEEGTHINAIGADGP 221 (320)
T ss_dssp SSCCBCG-GGCCTTCEEEECSCCST
T ss_pred cccccch-hhcCCCCeEeecCCccc
Confidence 5443222 57999999999998653
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=91.74 E-value=0.081 Score=40.38 Aligned_cols=82 Identities=12% Similarity=0.088 Sum_probs=55.9
Q ss_pred EEEEEcCChHHHHHHHHHHHc-CCeEEEEe-CChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAF-GHHVTVIS-TSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGP 264 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~-G~~V~~~~-~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~ 264 (360)
++.|+|.|.+|...+..++.. +++++++. +++++ .....+..+.+. ......+|+|+.|++.......
T Consensus 5 rvgiiG~G~ig~~~~~~l~~~~~~elvav~~~~~~~-------~~~~~~~~~~~~---~~~~~~~D~Vvi~tp~~~h~~~ 74 (170)
T d1f06a1 5 RVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL-------DTKTPVFDVADV---DKHADDVDVLFLCMGSATDIPE 74 (170)
T ss_dssp EEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC-------SSSSCEEEGGGG---GGTTTTCSEEEECSCTTTHHHH
T ss_pred eEEEECChHHHHHHHHHHHhCCCcEEEEEEeccccc-------ccccccccchhh---hhhccccceEEEeCCCcccHHH
Confidence 588999999999888877765 56765554 44321 111222222222 2234579999999998878899
Q ss_pred HHHHhccCCEEEEe
Q 018158 265 ILELLKVNGTLSVV 278 (360)
Q Consensus 265 ~~~~l~~~G~~v~~ 278 (360)
+..++..|-.++..
T Consensus 75 a~~aL~aG~~vv~~ 88 (170)
T d1f06a1 75 QAPKFAQFACTVDT 88 (170)
T ss_dssp HHHHHTTTSEEECC
T ss_pred HHHHHHCCCcEEEe
Confidence 99999999887643
|
| >d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Galactose/lactose metabolism regulatory protein GAL80 species: Yeast (Kluyveromyces lactis) [TaxId: 28985]
Probab=91.54 E-value=0.36 Score=38.71 Aligned_cols=96 Identities=13% Similarity=0.115 Sum_probs=61.8
Q ss_pred CCcEEEEEcCCh----HHHHHHHHHHHc--CCeEE-EEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcC
Q 018158 184 AKKRIGIVGLGG----LGHVAVKFGKAF--GHHVT-VISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 184 ~~~~vlI~Gag~----vG~~aiqla~~~--G~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
+.=++.|+|.|. ++...+...+.. +++++ +.+++.++.+.+.++++....-.+.+.+.+. ....+|+|+.|+
T Consensus 15 k~irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~iD~V~i~t 93 (237)
T d2nvwa1 15 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFA-QYKDIDMIVVSV 93 (237)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHH-HCTTCSEEEECS
T ss_pred CCeEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeecchhhcc-cccccceeeccC
Confidence 335788999865 444444445443 56766 4567777777776668854433344443332 146799999999
Q ss_pred CCcccHHHHHHHhccC-----CEEEEeCC
Q 018158 257 SAKHSLGPILELLKVN-----GTLSVVGA 280 (360)
Q Consensus 257 g~~~~~~~~~~~l~~~-----G~~v~~g~ 280 (360)
......+.+..++..| +.-+.+-.
T Consensus 94 p~~~h~~~~~~al~aG~~~~~~k~V~~EK 122 (237)
T d2nvwa1 94 KVPEHYEVVKNILEHSSQNLNLRYLYVEW 122 (237)
T ss_dssp CHHHHHHHHHHHHHHSSSCSSCCEEEEES
T ss_pred CCcchhhHHHHHHHhcccccCCceEEEec
Confidence 8887778888888765 34566643
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.47 E-value=0.27 Score=41.60 Aligned_cols=90 Identities=24% Similarity=0.225 Sum_probs=51.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHH---HcCC-CeE-eeCccHHHHHhcCCCcCEEEEcC-
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKE---LLGA-DEF-ILSTNAMQMQAGKRTLDFILDTV- 256 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~---~~g~-~~~-v~~~~~~~~~~~~~~~d~vid~~- 256 (360)
+|++||-+|+|. |.++..+|+ .|+ +|++++.++. ...+++ +.+. +.+ +...+..........+|+|+...
T Consensus 38 ~~~~VLDlGcGt-G~ls~~aa~-~Ga~~V~avd~s~~-~~~a~~~~~~~~~~~~i~~i~~~~~~l~~~~~~~D~i~se~~ 114 (328)
T d1g6q1_ 38 KDKIVLDVGCGT-GILSMFAAK-HGAKHVIGVDMSSI-IEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWM 114 (328)
T ss_dssp TTCEEEEETCTT-SHHHHHHHH-TCCSEEEEEESSTH-HHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCC
T ss_pred CcCEEEEeCCCC-CHHHHHHHH-hCCCEEEEEeCCHH-HHHHHHHHHHhCccccceEEEeehhhccCcccceeEEEEEec
Confidence 899999999963 666655555 576 7999998752 233322 1442 222 22222222222246799997632
Q ss_pred C----Ccc----cHHHHHHHhccCCEEE
Q 018158 257 S----AKH----SLGPILELLKVNGTLS 276 (360)
Q Consensus 257 g----~~~----~~~~~~~~l~~~G~~v 276 (360)
+ ... .+...-++|+++|.++
T Consensus 115 ~~~~~~e~~~~~~~~a~~r~LkpgG~ii 142 (328)
T d1g6q1_ 115 GYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp BTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred ceeeccchhHHHHHHHHHhccCCCeEEE
Confidence 1 111 2344457899999873
|
| >d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=91.46 E-value=0.085 Score=41.73 Aligned_cols=31 Identities=29% Similarity=0.323 Sum_probs=28.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTS 217 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~ 217 (360)
-|+|+|+|+.|+.++..+.++|.+|++++..
T Consensus 5 DvvVIGgGpaGl~aA~~aa~~G~kV~vie~~ 35 (221)
T d1dxla1 5 DVVIIGGGPGGYVAAIKAAQLGFKTTCIEKR 35 (221)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEEECS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEEec
Confidence 3789999999999999999999999999865
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=91.42 E-value=0.089 Score=44.21 Aligned_cols=34 Identities=29% Similarity=0.311 Sum_probs=30.1
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
.-.|+|+|||..|++++..++..|.+|.++++.+
T Consensus 7 ~~dV~IIGAG~sGl~~a~~L~~~G~~v~i~Ek~~ 40 (298)
T d1w4xa1 7 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAG 40 (298)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 4468999999999999999999999999999764
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=91.25 E-value=0.073 Score=45.37 Aligned_cols=32 Identities=25% Similarity=0.308 Sum_probs=26.6
Q ss_pred EEEEEcCChHHHHHHHHH-----HHcCCeEEEEeCCh
Q 018158 187 RIGIVGLGGLGHVAVKFG-----KAFGHHVTVISTSP 218 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla-----~~~G~~V~~~~~~~ 218 (360)
-|+|+|+|++|+++++++ +..|.+|+++++++
T Consensus 9 DV~IvGaG~aGl~lA~~La~~~~~~~G~~v~vlEr~~ 45 (360)
T d1pn0a1 9 DVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRS 45 (360)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHhcccccCCCcEEEEcCCC
Confidence 489999999999877776 35799999999764
|
| >d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Achromobacter xylosoxidans [TaxId: 85698]
Probab=91.13 E-value=0.93 Score=34.24 Aligned_cols=95 Identities=17% Similarity=0.263 Sum_probs=57.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcC----CeEEEEeC--ChhHHHHHHHHcCC------CeE--------e--------eCcc
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFG----HHVTVIST--SPSKEKEAKELLGA------DEF--------I--------LSTN 238 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G----~~V~~~~~--~~~~~~~~~~~~g~------~~~--------v--------~~~~ 238 (360)
+|.|.|-|-+|.++...+-..+ .+|.++-. +.+.+..+.+ +-. ..+ + ..++
T Consensus 3 kigINGfGRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLlk-yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~ 81 (173)
T d1obfo1 3 RVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTR-YDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRN 81 (173)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHH-EETTTEECSSCEEEETTEEEETTEEEEEECCSC
T ss_pred EEEEECCcHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhhc-ccccCCCcCceEEeccceEEECCEEEEEEecCC
Confidence 5788899999999887765432 35655552 3344445544 321 011 1 1111
Q ss_pred HHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 239 AMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 239 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+....=...++|+|+||+|.......+...+..|-+-|.+..+.
T Consensus 82 p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~ 125 (173)
T d1obfo1 82 PAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPG 125 (173)
T ss_dssp GGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCC
T ss_pred HHHCcccccccceEEEecccccCHHHHHHHhccCCcceEEecCC
Confidence 11111114689999999998767778889998887666665543
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=91.10 E-value=0.46 Score=38.22 Aligned_cols=34 Identities=35% Similarity=0.586 Sum_probs=29.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTS 217 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~ 217 (360)
.+.+|+|+|+|++|..++..+-..|. ++++++.+
T Consensus 29 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 63 (247)
T d1jw9b_ 29 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 63 (247)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred hCCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCc
Confidence 45789999999999999999999999 68888844
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=90.83 E-value=0.099 Score=43.84 Aligned_cols=32 Identities=31% Similarity=0.293 Sum_probs=29.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
.++|+|||..|+.++..+...|.+|.+++.++
T Consensus 3 dv~IIGaG~sGl~~A~~L~~~g~~V~iiEk~~ 34 (298)
T d1i8ta1 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRN 34 (298)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred cEEEECCcHHHHHHHHHHHhCCCcEEEEECCC
Confidence 47999999999999999988999999999765
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=90.72 E-value=1.6 Score=34.63 Aligned_cols=88 Identities=16% Similarity=0.188 Sum_probs=51.2
Q ss_pred CCcEEEEEcCChHHHHHHHHH-HHcCCeEEEEeCC-----------hhHHHHHHHHcCCC-eEeeCccHHHHHhcCCCcC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFG-KAFGHHVTVISTS-----------PSKEKEAKELLGAD-EFILSTNAMQMQAGKRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla-~~~G~~V~~~~~~-----------~~~~~~~~~~~g~~-~~v~~~~~~~~~~~~~~~d 250 (360)
.+.+++|.|.|.+|..+++.+ +..|++|++++.+ .+.+...++..+.. ........+...-....+|
T Consensus 30 ~g~~vaIqG~GnVG~~~a~~L~~e~Ga~vv~vsd~~G~i~~~~Gld~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 109 (234)
T d1b26a1 30 KKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELLELDVD 109 (234)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHHCCEEEEEEETTEEEECTTCCCHHHHHHHHHHSSCSTTCSSCEEECHHHHHTSCCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCceEEeecCCCcEEeccccchHHHHHHHHhhcceeccccceeeccccccccccc
Confidence 689999999999999988877 5689998877632 23444444433311 0000000001111245788
Q ss_pred EEEEcCCCcccHHHHHHHhcc
Q 018158 251 FILDTVSAKHSLGPILELLKV 271 (360)
Q Consensus 251 ~vid~~g~~~~~~~~~~~l~~ 271 (360)
+.+=|.-....-..-...++.
T Consensus 110 I~~PcA~~~~I~~~~a~~l~~ 130 (234)
T d1b26a1 110 ILVPAALEGAIHAGNAERIKA 130 (234)
T ss_dssp EEEECSCTTCBCHHHHTTCCC
T ss_pred eeecchhcccccHHHHHHhhh
Confidence 888776554444555555554
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=90.72 E-value=0.11 Score=40.99 Aligned_cols=31 Identities=16% Similarity=0.304 Sum_probs=28.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTS 217 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~ 217 (360)
-|+|+|+|+.|+.++..|..+|.+|.+++++
T Consensus 4 DvvVIG~G~aG~~aA~~a~~~G~kV~iiE~~ 34 (217)
T d1gesa1 4 DYIAIGGGSGGIASINRAAMYGQKCALIEAK 34 (217)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCEEEEEecc
Confidence 3789999999999999999999999999865
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=90.67 E-value=0.13 Score=43.98 Aligned_cols=73 Identities=22% Similarity=0.222 Sum_probs=49.0
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHH--HHHHHcCCCeEe--eCcc-HHHHHhcCCCcCEEEEcCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEK--EAKELLGADEFI--LSTN-AMQMQAGKRTLDFILDTVS 257 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~--~~~~~~g~~~~v--~~~~-~~~~~~~~~~~d~vid~~g 257 (360)
+.++|+|+|+ |.+|..++..+...|.+|+++.|+..+.. .+.. .....++ |..+ .+.......+.|.++....
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~-~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~ 80 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQA-IPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT 80 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHT-STTEEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcc-cCCCEEEEeeCCCcHHHHHHHhcCCceEEeecc
Confidence 5689999999 99999999999999999999998765432 2222 3222232 2222 2334445677888876553
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.65 E-value=0.15 Score=42.86 Aligned_cols=71 Identities=20% Similarity=0.162 Sum_probs=45.0
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChh--HHHHHHHHcCCC-----eEeeCccHHHHHhc--CCCcCEEEEc
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPS--KEKEAKELLGAD-----EFILSTNAMQMQAG--KRTLDFILDT 255 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~--~~~~~~~~~g~~-----~~v~~~~~~~~~~~--~~~~d~vid~ 255 (360)
++|||+|+ |-+|..++..+...|++|+++++... ....+.. ++.+ ...|-.+....... ....++++.+
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~ 79 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRE-LGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNL 79 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHH-TTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHH-hcccCCcEEEEccccChHHhhhhhccccccccccc
Confidence 58999999 99999999988888999999997543 2334444 4422 11233333333222 3456677776
Q ss_pred CC
Q 018158 256 VS 257 (360)
Q Consensus 256 ~g 257 (360)
..
T Consensus 80 a~ 81 (321)
T d1rpna_ 80 AA 81 (321)
T ss_dssp CS
T ss_pred cc
Confidence 64
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=90.55 E-value=0.092 Score=40.03 Aligned_cols=98 Identities=9% Similarity=0.027 Sum_probs=60.9
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHH-HHHHH-HcCCCeEee--CccHHHHHhcCCCcCEEEEcCCC
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKE-KEAKE-LLGADEFIL--STNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~-~~~~~-~~g~~~~v~--~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
.|++++|+|- ..+|.=+..++...|++|+....+.... ..... ..-...+-+ ....+..+......|+++.++|.
T Consensus 28 ~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIsavG~ 107 (171)
T d1edza1 28 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGVPS 107 (171)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred CCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEEccCC
Confidence 6899999998 7899988888888999999877543210 00000 000111111 11122344445579999999987
Q ss_pred cccHHHHHHHhccCCEEEEeCCCC
Q 018158 259 KHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 259 ~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
... .---+++++|..++++|...
T Consensus 108 p~~-~i~~d~ik~GavvIDvGi~~ 130 (171)
T d1edza1 108 ENY-KFPTEYIKEGAVCINFACTK 130 (171)
T ss_dssp TTC-CBCTTTSCTTEEEEECSSSC
T ss_pred Ccc-ccChhhcccCceEeeccccc
Confidence 642 11226788898889998754
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.53 E-value=0.11 Score=43.98 Aligned_cols=31 Identities=29% Similarity=0.325 Sum_probs=28.1
Q ss_pred EEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 188 IGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 188 vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
|+|+|+|..|+.++..++..|.+|++++.++
T Consensus 2 ViVIGaG~aGL~aA~~L~~~G~~V~VlE~~~ 32 (383)
T d2v5za1 2 VVVVGGGISGMAAAKLLHDSGLNVVVLEARD 32 (383)
T ss_dssp EEEECCBHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 7899999999999999999999999999654
|
| >d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=90.52 E-value=0.13 Score=41.09 Aligned_cols=32 Identities=19% Similarity=0.173 Sum_probs=28.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
-|+|+|+|+.|+.++..|.++|.+|.++++.+
T Consensus 8 DviIIG~GPaGlsaA~~aa~~G~~V~viE~~~ 39 (229)
T d1ojta1 8 DVVVLGGGPGGYSAAFAAADEGLKVAIVERYK 39 (229)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCeEEEEeccC
Confidence 47889999999999999999999999998654
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.44 E-value=0.19 Score=39.46 Aligned_cols=67 Identities=10% Similarity=-0.054 Sum_probs=43.0
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHcCCCeEeeCccHH-HHHhcCCCcCEEEEcCCCc
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKELLGADEFILSTNAM-QMQAGKRTLDFILDTVSAK 259 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~-~~~~~~~~~d~vid~~g~~ 259 (360)
++|||+|+ |-+|..++..+...|. +|++..|++.. .....-.+..+.. ........+|.|+.|+|..
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-------~~~~~~~~~~d~~~~~~~~~~~~d~vi~~~g~~ 73 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------EHPRLDNPVGPLAELLPQLDGSIDTAFCCLGTT 73 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------CCTTEECCBSCHHHHGGGCCSCCSEEEECCCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-------hcccccccccchhhhhhccccchheeeeeeeee
Confidence 78999999 9999999998888886 67777655321 0011111122222 2233356789999998753
|
| >d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=90.42 E-value=0.13 Score=40.76 Aligned_cols=31 Identities=23% Similarity=0.236 Sum_probs=28.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTS 217 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~ 217 (360)
.++|+|+|+.|+.++..|..+|.+|.++++.
T Consensus 7 DlvVIG~GpaGl~aA~~aa~~G~~V~liE~~ 37 (220)
T d1lvla1 7 TLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (220)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEecC
Confidence 4789999999999999999999999999865
|
| >d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Histamine methyltransferase domain: Histamine methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.41 E-value=0.17 Score=41.67 Aligned_cols=96 Identities=18% Similarity=0.208 Sum_probs=57.8
Q ss_pred CCcEEEEEcCChHHHHHHHHHHH----c-C--CeEEEEeCChhHHHHHHHHcCCC-----eEeeCcc--HHHH------H
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKA----F-G--HHVTVISTSPSKEKEAKELLGAD-----EFILSTN--AMQM------Q 243 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~----~-G--~~V~~~~~~~~~~~~~~~~~g~~-----~~v~~~~--~~~~------~ 243 (360)
+.-+||=+|+|. |..+..+++. . + .++++++.++..++.+++++... ..++... .+.. .
T Consensus 40 ~~~~VLDiGcG~-G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (280)
T d1jqea_ 40 SEIKILSIGGGA-GEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSRMLEK 118 (280)
T ss_dssp SEEEEEEETCTT-SHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHHHHHHHTTS
T ss_pred CCCeEEEEcCCC-CHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhhhcchhccc
Confidence 555788888843 4343333332 1 2 36899999999888888754311 1111111 1111 1
Q ss_pred hcCCCcCEEEEcCC-----C-cccHHHHHHHhccCCEEEEeCC
Q 018158 244 AGKRTLDFILDTVS-----A-KHSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 244 ~~~~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g~ 280 (360)
.....+|+|+-... . ...+..+.++|+++|.++....
T Consensus 119 ~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~~ 161 (280)
T d1jqea_ 119 KELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVV 161 (280)
T ss_dssp SSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEEe
Confidence 12567999987543 1 2357899999999998877643
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=90.30 E-value=0.34 Score=40.08 Aligned_cols=33 Identities=18% Similarity=0.508 Sum_probs=30.5
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVIST 216 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~ 216 (360)
.|++|+|.|.|-+|..+++++...|++|++++.
T Consensus 35 ~gktvaIqGfGnVG~~~A~~L~e~Gakvv~vsD 67 (293)
T d1hwxa1 35 GDKTFAVQGFGNVGLHSMRYLHRFGAKCVAVGE 67 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEc
Confidence 689999999999999999999999999888763
|
| >d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=90.20 E-value=0.14 Score=40.36 Aligned_cols=30 Identities=30% Similarity=0.397 Sum_probs=27.6
Q ss_pred EEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018158 188 IGIVGLGGLGHVAVKFGKAFGHHVTVISTS 217 (360)
Q Consensus 188 vlI~Gag~vG~~aiqla~~~G~~V~~~~~~ 217 (360)
++|+|+|+.|+.++..|.+.|.+|.++++.
T Consensus 6 viVIG~GpaGl~aA~~aar~G~kV~vIEk~ 35 (223)
T d1ebda1 6 TLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (223)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEecC
Confidence 788999999999999999999999999865
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=90.16 E-value=1.3 Score=32.20 Aligned_cols=70 Identities=14% Similarity=0.182 Sum_probs=44.8
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHcC-CCeEe---eCccHHHHHhcCCCcCEEEEcCCC
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFGH--HVTVISTSPSKEKEAKELLG-ADEFI---LSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~~~~~g-~~~~v---~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
+|.|+|| |.+|..++.++...|. ++..++.++.+ ..+.. +- +.... .........+.-++.|+|+-+.|.
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~-~~a~D-l~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~ 78 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTP-GVAAD-LSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGV 78 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHH-HHHHH-HTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSC
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccc-hhhHH-HhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCc
Confidence 6889997 9999999999998886 58888876543 44444 32 11110 000111222334789999999884
|
| >d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TRM1-like domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=90.16 E-value=0.53 Score=40.55 Aligned_cols=90 Identities=23% Similarity=0.228 Sum_probs=62.6
Q ss_pred EEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHc---CCCe----------------EeeCccH-HHHHhcCCC
Q 018158 190 IVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELL---GADE----------------FILSTNA-MQMQAGKRT 248 (360)
Q Consensus 190 I~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~---g~~~----------------~v~~~~~-~~~~~~~~~ 248 (360)
+.+.++.|...+++|+..|+ +|++.+.+++..+.+++.+ +... .++..+. ......+..
T Consensus 50 LD~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~Da~~~~~~~~~~ 129 (375)
T d2dula1 50 LDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAERHRY 129 (375)
T ss_dssp EESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHHSTTC
T ss_pred EEcCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehhhhhhhhHhhcCc
Confidence 33447778999999998888 6999999999888887753 2111 1122222 223334667
Q ss_pred cCEE-EEcCCCccc-HHHHHHHhccCCEEEEeC
Q 018158 249 LDFI-LDTVSAKHS-LGPILELLKVNGTLSVVG 279 (360)
Q Consensus 249 ~d~v-id~~g~~~~-~~~~~~~l~~~G~~v~~g 279 (360)
+|+| +|..|.... +..+++.++.+|-+....
T Consensus 130 fDvIDiDPfGs~~pfldsAi~a~~~~Gll~vTa 162 (375)
T d2dula1 130 FHFIDLDPFGSPMEFLDTALRSAKRRGILGVTA 162 (375)
T ss_dssp EEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcccCCCCCCcHHHHHHHHHHhccCCEEEEEe
Confidence 9987 799887543 578999999998887664
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=90.04 E-value=0.14 Score=43.50 Aligned_cols=34 Identities=32% Similarity=0.360 Sum_probs=27.3
Q ss_pred cEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCChh
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFG--HHVTVISTSPS 219 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G--~~V~~~~~~~~ 219 (360)
++|+|+|||+.|++++..++..| .+|++++++++
T Consensus 5 KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 5 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 68999999999998876655544 58999998753
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=89.94 E-value=0.14 Score=41.88 Aligned_cols=33 Identities=9% Similarity=0.154 Sum_probs=28.2
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
-.|+|+|+|.+|+.++..+...|.+|+++++.+
T Consensus 5 ~DvvIIGaGi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 5 YEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 358999999999988777777899999999753
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=89.93 E-value=0.38 Score=35.78 Aligned_cols=73 Identities=11% Similarity=0.152 Sum_probs=45.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHH-------HHHcCCCeEeeCccHHHHHhcCCCcCEEEEc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEA-------KELLGADEFILSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~-------~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~ 255 (360)
+..+|.|+|+|.+|..++.++...+. ++..++.++++.+-. ...++....+.... .....-++.|+|+-+
T Consensus 6 k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~--~~~~~~~~adiVvit 83 (154)
T d1pzga1 6 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEY--SYEAALTGADCVIVT 83 (154)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEEC--SHHHHHTTCSEEEEC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccC--chhhhhcCCCeEEEe
Confidence 67889999999999988888887775 788998776543221 11122221111111 111223678999988
Q ss_pred CCC
Q 018158 256 VSA 258 (360)
Q Consensus 256 ~g~ 258 (360)
.|.
T Consensus 84 ag~ 86 (154)
T d1pzga1 84 AGL 86 (154)
T ss_dssp CSC
T ss_pred ccc
Confidence 864
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=89.93 E-value=0.64 Score=39.12 Aligned_cols=74 Identities=18% Similarity=0.236 Sum_probs=47.5
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC----ChhHHHHHHHHcC----CC-eEe--eCccHHHHHhcCCCcCE
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIST----SPSKEKEAKELLG----AD-EFI--LSTNAMQMQAGKRTLDF 251 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~----~~~~~~~~~~~~g----~~-~~v--~~~~~~~~~~~~~~~d~ 251 (360)
..+++||+|+ |-+|..++..+...|.+|+++++ +......++.... .+ ..+ |..+.........+.+.
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~~ 94 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY 94 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccccc
Confidence 4578999999 99999999999999999999985 2233333433111 11 122 33333334444667777
Q ss_pred EEEcCC
Q 018158 252 ILDTVS 257 (360)
Q Consensus 252 vid~~g 257 (360)
++.+..
T Consensus 95 v~~~~a 100 (341)
T d1sb8a_ 95 VLHQAA 100 (341)
T ss_dssp EEECCS
T ss_pred cccccc
Confidence 776654
|
| >d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=89.88 E-value=0.15 Score=40.53 Aligned_cols=32 Identities=22% Similarity=0.307 Sum_probs=28.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
-|+|+|+|+.|+.++..|..+|.+|.+++..+
T Consensus 7 DviVIG~GpAGl~aA~~aa~~G~kV~lie~~~ 38 (233)
T d1v59a1 7 DVVIIGGGPAGYVAAIKAAQLGFNTACVEKRG 38 (233)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 47899999999998888888999999998653
|
| >d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Escherichia coli, isoform B (CysM) [TaxId: 562]
Probab=89.82 E-value=1.7 Score=35.64 Aligned_cols=95 Identities=8% Similarity=0.102 Sum_probs=61.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeC---ChhHHHHHHHHcCCCeEeeCccH---------------------
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVIST---SPSKEKEAKELLGADEFILSTNA--------------------- 239 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~---~~~~~~~~~~~~g~~~~v~~~~~--------------------- 239 (360)
++++|+...+|..|++++..++.+|.+++++.+ ++.+.+.++. +|++-++...+.
T Consensus 59 ~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~-~GA~v~~v~~~~~~~~a~~~~~~~~~~~~~~~~ 137 (292)
T d2bhsa1 59 PGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRA-YGAELILVTKEQGMEGARDLALEMANRGEGKLL 137 (292)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHH-TTCEEEEECTTTHHHHHHHHHHHHHHHTSSEEC
T ss_pred CCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHH-hCCCcceeecccchHHHHHHHhhcccccccccc
Confidence 666666666699999999999999998555554 4566777777 998644322110
Q ss_pred ------H------------HHHhcCCCcCEEEEcCCCcccHH---HHHHHhccCCEEEEeC
Q 018158 240 ------M------------QMQAGKRTLDFILDTVSAKHSLG---PILELLKVNGTLSVVG 279 (360)
Q Consensus 240 ------~------------~~~~~~~~~d~vid~~g~~~~~~---~~~~~l~~~G~~v~~g 279 (360)
. ...+.+..+|+++-++|+...+. ..++...+..+++.+-
T Consensus 138 ~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Ve 198 (292)
T d2bhsa1 138 DQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQ 198 (292)
T ss_dssp CTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEE
T ss_pred CCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEec
Confidence 0 00112456999999998765544 3444445666776553
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=89.76 E-value=1.1 Score=32.73 Aligned_cols=70 Identities=13% Similarity=0.203 Sum_probs=44.3
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHH-HHHH------HcCCCeEeeCccHHHHHhcCCCcCEEEEcC
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEK-EAKE------LLGADEFILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~-~~~~------~~g~~~~v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
.+|.|+|+|.+|..++..+...|. ++..++.++++.+ .+.. ..+...+....+. +.-++.|+|+-+.
T Consensus 2 ~Ki~IIGaG~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~----~~~~daDvVVita 77 (143)
T d1llda1 2 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDP----EICRDADMVVITA 77 (143)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCG----GGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCH----HHhhCCcEEEEec
Confidence 457888999999998888887776 6999998876532 1111 0122222222221 1245789999999
Q ss_pred CCc
Q 018158 257 SAK 259 (360)
Q Consensus 257 g~~ 259 (360)
|..
T Consensus 78 G~~ 80 (143)
T d1llda1 78 GPR 80 (143)
T ss_dssp CCC
T ss_pred ccc
Confidence 853
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=89.68 E-value=0.82 Score=33.68 Aligned_cols=72 Identities=17% Similarity=0.139 Sum_probs=44.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHH-HHH------HHcCCCeEeeCccHHHHHhcCCCcCEEEEc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEK-EAK------ELLGADEFILSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~-~~~------~~~g~~~~v~~~~~~~~~~~~~~~d~vid~ 255 (360)
|..+|.|+|+|.+|...+.++...+. ++..++.++++.+ .+. ...+....+...+. .+.-++.|+++-+
T Consensus 2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~---~~~~~~advvvit 78 (150)
T d1t2da1 2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNT---YDDLAGADVVIVT 78 (150)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECC---GGGGTTCSEEEEC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEeccc---ccccCCCcEEEEe
Confidence 55689999999999988888887776 7888887765432 111 11122211211111 1224679999998
Q ss_pred CCC
Q 018158 256 VSA 258 (360)
Q Consensus 256 ~g~ 258 (360)
.|.
T Consensus 79 ag~ 81 (150)
T d1t2da1 79 AGF 81 (150)
T ss_dssp CSC
T ss_pred ccc
Confidence 884
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=89.61 E-value=0.37 Score=35.49 Aligned_cols=89 Identities=15% Similarity=0.091 Sum_probs=48.8
Q ss_pred EEEEEcC-ChHHHHHHHH-HHHcC---CeEEEEeCChhHHHHHHHHcC-CCeEeeCccHHHHHhcCCCcCEEEEcCCCcc
Q 018158 187 RIGIVGL-GGLGHVAVKF-GKAFG---HHVTVISTSPSKEKEAKELLG-ADEFILSTNAMQMQAGKRTLDFILDTVSAKH 260 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiql-a~~~G---~~V~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~ 260 (360)
+|.|+|| |-+|+-.+++ +.+.. .+++...++......... .+ ...+.+..+... -.++|++|-|++...
T Consensus 3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~-~~~~~~~~~~~~~~~----~~~~DivF~a~~~~~ 77 (146)
T d1t4ba1 3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSF-GGTTGTLQDAFDLEA----LKALDIIVTCQGGDY 77 (146)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGG-GTCCCBCEETTCHHH----HHTCSEEEECSCHHH
T ss_pred EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccc-cCCceeeecccchhh----hhcCcEEEEecCchH
Confidence 6889999 9999999974 54432 356666655321111100 11 111112222111 257999999998876
Q ss_pred cHHHHHHHhccCC--EEEEeCC
Q 018158 261 SLGPILELLKVNG--TLSVVGA 280 (360)
Q Consensus 261 ~~~~~~~~l~~~G--~~v~~g~ 280 (360)
.......+...+- .+++.+.
T Consensus 78 s~~~~~~~~~~g~~~~VID~Ss 99 (146)
T d1t4ba1 78 TNEIYPKLRESGWQGYWIDAAS 99 (146)
T ss_dssp HHHHHHHHHHTTCCCEEEECSS
T ss_pred HHHhhHHHHhcCCCeecccCCc
Confidence 5444444445542 3666653
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=89.51 E-value=0.25 Score=35.35 Aligned_cols=86 Identities=26% Similarity=0.273 Sum_probs=53.6
Q ss_pred CCcEEEEEcCChH-----------HHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEee-CccHHHHHhc--CCCc
Q 018158 184 AKKRIGIVGLGGL-----------GHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFIL-STNAMQMQAG--KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Gag~v-----------G~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~-~~~~~~~~~~--~~~~ 249 (360)
.-++|||+|+|+. +.-++..+|..|++++.+..+++....-.. + ++.++. +-..+....+ ..+.
T Consensus 6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d-~-aD~lYfePlt~e~v~~Ii~~E~p 83 (127)
T d1a9xa3 6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE-M-ADATYIEPIHWEVVRKIIEKERP 83 (127)
T ss_dssp SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG-G-SSEEECSCCCHHHHHHHHHHHCC
T ss_pred CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh-h-cceeeeecCCHHHHHHHHHHhCc
Confidence 4588999999763 344566666779999999988875432111 1 344432 2222333333 3578
Q ss_pred CEEEEcCCCcccHHHHHHHhcc
Q 018158 250 DFILDTVSAKHSLGPILELLKV 271 (360)
Q Consensus 250 d~vid~~g~~~~~~~~~~~l~~ 271 (360)
|.++-..|+..+++.+.++.+.
T Consensus 84 d~il~~~GGQtalnla~~L~~~ 105 (127)
T d1a9xa3 84 DAVLPTMGGQTALNCALELERQ 105 (127)
T ss_dssp SEEECSSSHHHHHHHHHHHHHT
T ss_pred CCeEEEeeeehHhHHHHHHHHc
Confidence 8888888877666666666544
|
| >d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=89.45 E-value=0.15 Score=39.44 Aligned_cols=32 Identities=22% Similarity=0.293 Sum_probs=28.3
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeC
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVIST 216 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~ 216 (360)
...|+|+|+|+.|+.++..|.+.|.+|+++++
T Consensus 5 ~~~VvIIGgGpaGl~aA~~~ar~g~~v~vie~ 36 (192)
T d1vdca1 5 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEG 36 (192)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred cceEEEECCCHHHHHHHHHHHHcCCcEEEEEe
Confidence 46799999999999988888899999998874
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=89.45 E-value=0.28 Score=34.47 Aligned_cols=35 Identities=26% Similarity=0.191 Sum_probs=28.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHc---CCeEEEEeCCh
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAF---GHHVTVISTSP 218 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~---G~~V~~~~~~~ 218 (360)
..++++|+|+|.+|+-+++++..+ |.+|+++.+++
T Consensus 17 ~p~~v~IiGgG~ig~E~A~~l~~~~~~g~~Vtli~~~~ 54 (117)
T d1feca2 17 APKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGD 54 (117)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred cCCeEEEECCChHHHHHHHHhHhhcccccccceecccc
Confidence 458999999999999777765543 78999998764
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=89.45 E-value=0.18 Score=40.06 Aligned_cols=33 Identities=21% Similarity=0.237 Sum_probs=27.1
Q ss_pred EEEEEcCChHHHHHHHHHHH--cCCeEEEEeCChh
Q 018158 187 RIGIVGLGGLGHVAVKFGKA--FGHHVTVISTSPS 219 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~--~G~~V~~~~~~~~ 219 (360)
+|+|+|+|+.|+.++..++. .|++|+++++.+.
T Consensus 3 kv~iIGaGpaGl~aA~~L~~~~~~~~V~v~e~~~~ 37 (230)
T d1cjca2 3 QICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLV 37 (230)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred eEEEECccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 68999999999998876654 4779999997753
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=89.37 E-value=1.4 Score=32.21 Aligned_cols=71 Identities=15% Similarity=0.236 Sum_probs=45.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHH-HHHH------HcCCCeEeeCccHHHHHhcCCCcCEEEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEK-EAKE------LLGADEFILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~-~~~~------~~g~~~~v~~~~~~~~~~~~~~~d~vid 254 (360)
...+|.|+|+|.+|...+..+...|. ++..++.++++.+ .+.. ..+...+. ..+. + .-++.|+|+-
T Consensus 4 ~~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~-~~d~---~-~~~~adivvi 78 (146)
T d1ez4a1 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SGEY---S-DCKDADLVVI 78 (146)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-ECCG---G-GGTTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEe-eccH---H-HhccccEEEE
Confidence 45689999999999988888887774 7999998876532 1111 01122221 2121 1 2367899999
Q ss_pred cCCCc
Q 018158 255 TVSAK 259 (360)
Q Consensus 255 ~~g~~ 259 (360)
++|..
T Consensus 79 tag~~ 83 (146)
T d1ez4a1 79 TAGAP 83 (146)
T ss_dssp CCCC-
T ss_pred ecccc
Confidence 88754
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=89.20 E-value=0.46 Score=34.06 Aligned_cols=71 Identities=24% Similarity=0.334 Sum_probs=48.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccHHH
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFGHHVTVI-STSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSLGP 264 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G~~V~~~-~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~~~ 264 (360)
++.|+|+ |-+|.+..+++...+.+++.. +.+. . ..-.++|+++|.+.-. ....
T Consensus 2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~--------------------~----~~~~~~DVvIDFS~p~-~~~~ 56 (128)
T d1vm6a3 2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNG--------------------V----EELDSPDVVIDFSSPE-ALPK 56 (128)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTE--------------------E----EECSCCSEEEECSCGG-GHHH
T ss_pred EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCc--------------------H----HHhccCCEEEEecCHH-HHHH
Confidence 5889998 999999999999988875543 3111 0 0124689999988665 4455
Q ss_pred HHHHhccCCEEEEeCCCC
Q 018158 265 ILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 265 ~~~~l~~~G~~v~~g~~~ 282 (360)
.++.....+.=+.+|...
T Consensus 57 ~l~~~~~~~~p~ViGTTG 74 (128)
T d1vm6a3 57 TVDLCKKYRAGLVLGTTA 74 (128)
T ss_dssp HHHHHHHHTCEEEECCCS
T ss_pred HHHHHHhcCCCEEEEcCC
Confidence 556666666666777654
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=89.20 E-value=0.13 Score=43.68 Aligned_cols=72 Identities=13% Similarity=-0.021 Sum_probs=45.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcCCCeEe-eCccH-HHHHhcCCCcCEEEEcCCC
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLGADEFI-LSTNA-MQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~-~~~~~~~~~~d~vid~~g~ 258 (360)
+|||+|+ |-+|..+++.+...| .+|+++++...+...+.+.-..+.+. |-.+. +..+....++|+|+.+++.
T Consensus 2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~ 77 (342)
T d2blla1 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI 77 (342)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCcccccccc
Confidence 5899999 999999988877777 58999987665444333311111111 11121 1222234579999998874
|
| >d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=89.17 E-value=0.13 Score=41.12 Aligned_cols=34 Identities=24% Similarity=0.186 Sum_probs=28.5
Q ss_pred cEEEEEcCChHHHHHHHHHHHcC-------CeEEEEeCChh
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFG-------HHVTVISTSPS 219 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G-------~~V~~~~~~~~ 219 (360)
.+|+|+|+|+.|++++..+...| ++|++++..+.
T Consensus 3 ~~VaVIGaGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~ 43 (239)
T d1lqta2 3 YYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 43 (239)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred cEEEEECcCHHHHHHHHHHHHcCCccccCCCceEEEecCCC
Confidence 47999999999999888887776 57999997653
|
| >d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TrmB-like domain: tRNA (guanine-N(7)-)-methyltransferase TrmB species: Bacillus subtilis [TaxId: 1423]
Probab=89.10 E-value=3.8 Score=31.51 Aligned_cols=91 Identities=18% Similarity=0.084 Sum_probs=60.1
Q ss_pred EEEEEcCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHH---cCCCeE-eeCccHHHHH-hc-CCCcCEEEEcCCCc
Q 018158 187 RIGIVGLGGLGHVAVKFGKAF-GHHVTVISTSPSKEKEAKEL---LGADEF-ILSTNAMQMQ-AG-KRTLDFILDTVSAK 259 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~~~~~~~~~~~~---~g~~~~-v~~~~~~~~~-~~-~~~~d~vid~~g~~ 259 (360)
.+|=+|+|. |..++.+|+.. +..+++++.+......+.++ .|.+.+ +...+..... .. ...+|.|+-....+
T Consensus 32 lvLeIGcG~-G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da~~l~~~~~~~~~d~v~i~fp~P 110 (204)
T d2fcaa1 32 IHIEVGTGK-GQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFSDP 110 (204)
T ss_dssp EEEEECCTT-SHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESCCC
T ss_pred eEEEEEecC-cHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccchhhhhcccCchhhhccccccccc
Confidence 455578864 88888888876 56899999999877666443 565433 2222222222 22 45688887555432
Q ss_pred --------------ccHHHHHHHhccCCEEEEe
Q 018158 260 --------------HSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 260 --------------~~~~~~~~~l~~~G~~v~~ 278 (360)
..+..+.+.|++||.+...
T Consensus 111 ~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~ 143 (204)
T d2fcaa1 111 WPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK 143 (204)
T ss_dssp CCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred cchhhhcchhhhHHHHHHHHHHhCCCCcEEEEE
Confidence 3567888999999998765
|
| >d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: NOL1/NOP2/sun domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=89.02 E-value=0.59 Score=38.56 Aligned_cols=95 Identities=20% Similarity=0.198 Sum_probs=55.3
Q ss_pred CCCCcEEEEEcC--ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---cCCCeE-eeCccHHHH-HhcCCCcCEEE-
Q 018158 182 SPAKKRIGIVGL--GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEL---LGADEF-ILSTNAMQM-QAGKRTLDFIL- 253 (360)
Q Consensus 182 ~~~~~~vlI~Ga--g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~---~g~~~~-v~~~~~~~~-~~~~~~~d~vi- 253 (360)
.++|++||=..| |+-...++++ ..+.+|++.+.+..|...+++. +|...+ +...+.... ......+|.|+
T Consensus 100 ~~~g~~vLD~CAaPGgKt~~la~l--~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~~~~~~~~~~~fd~IL~ 177 (284)
T d1sqga2 100 PQNGEHILDLCAAPGGKTTHILEV--APEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILL 177 (284)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHH--CTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEE
T ss_pred ccccceeEeccCccccchhhhhhh--hhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccccccchhcccccccEEEE
Confidence 348999888755 5444333332 2235799999999987666543 675433 322222111 12245799886
Q ss_pred E--cCCCc-------------------------ccHHHHHHHhccCCEEEEe
Q 018158 254 D--TVSAK-------------------------HSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 254 d--~~g~~-------------------------~~~~~~~~~l~~~G~~v~~ 278 (360)
| |+|.. ..+..++..+++||++|..
T Consensus 178 DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvYs 229 (284)
T d1sqga2 178 DAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYA 229 (284)
T ss_dssp ECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred eccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence 5 55532 2355666677888877654
|
| >d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.84 E-value=0.22 Score=39.16 Aligned_cols=30 Identities=17% Similarity=0.319 Sum_probs=27.7
Q ss_pred EEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018158 188 IGIVGLGGLGHVAVKFGKAFGHHVTVISTS 217 (360)
Q Consensus 188 vlI~Gag~vG~~aiqla~~~G~~V~~~~~~ 217 (360)
++|+|+|+.|+.++..|.++|.+|.+++..
T Consensus 6 viIIG~GpaG~~aA~~aar~G~kV~vIEk~ 35 (221)
T d3grsa1 6 YLVIGGGSGGLASARRAAELGARAAVVESH 35 (221)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEecc
Confidence 788999999999999999999999999864
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=88.82 E-value=0.14 Score=37.85 Aligned_cols=90 Identities=10% Similarity=0.132 Sum_probs=54.5
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcC---CeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCccc
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFG---HHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHS 261 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G---~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~ 261 (360)
-+|.|+|+ |-+|+-.++++..++ .++..+..+...-+.+. +..... ...+.+ .....+.|++|-+.+....
T Consensus 3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~--~~~~~~-~~~~~~--~~~~~~~d~vf~a~p~~~s 77 (144)
T d2hjsa1 3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG--FAESSL-RVGDVD--SFDFSSVGLAFFAAAAEVS 77 (144)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE--ETTEEE-ECEEGG--GCCGGGCSEEEECSCHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCccee--eccccc-hhccch--hhhhccceEEEecCCcchh
Confidence 35889999 999999999997543 36776664432111100 111111 111111 1124579999999988766
Q ss_pred HHHHHHHhccCCEEEEeCC
Q 018158 262 LGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 262 ~~~~~~~l~~~G~~v~~g~ 280 (360)
....-.....+.++++.+.
T Consensus 78 ~~~~~~~~~~g~~VID~Ss 96 (144)
T d2hjsa1 78 RAHAERARAAGCSVIDLSG 96 (144)
T ss_dssp HHHHHHHHHTTCEEEETTC
T ss_pred hhhccccccCCceEEeech
Confidence 6666667777878887754
|
| >d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Escherichia coli [TaxId: 562]
Probab=88.82 E-value=0.64 Score=34.86 Aligned_cols=95 Identities=11% Similarity=0.193 Sum_probs=57.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcC-CeEEEEeCCh--hHHHHHHHHc----C--CCeE--------ee--------CccHHH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFG-HHVTVISTSP--SKEKEAKELL----G--ADEF--------IL--------STNAMQ 241 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G-~~V~~~~~~~--~~~~~~~~~~----g--~~~~--------v~--------~~~~~~ 241 (360)
++.|.|-|-+|.++..++.... .+|.++-... +.+..+.+ + | ...+ ++ .+++..
T Consensus 3 kigINGFGRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl~-yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p~~ 81 (166)
T d1gado1 3 KVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLK-YDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPAN 81 (166)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHH-CCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred EEEEECCcHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhhe-ecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCChHH
Confidence 5778899999999998877664 5766666432 33344443 2 2 0111 11 111111
Q ss_pred HHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 242 MQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 242 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+.=...++|+|+||+|.......+...+..|-+-|.+..+.
T Consensus 82 i~W~~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~ 122 (166)
T d1gado1 82 LKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPS 122 (166)
T ss_dssp GCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred CCccccCCCEEEEccccccCHHHHHHHhcCCCceEEeeccc
Confidence 10013479999999998777788888888886556665444
|
| >d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arylamine N-methyltransferase domain: Phenylethanolamine N-methyltransferase, PNMTase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.63 E-value=0.067 Score=44.06 Aligned_cols=45 Identities=11% Similarity=0.035 Sum_probs=34.1
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG 229 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g 229 (360)
.|+++|=+|+|+ |...+..+.....+|++++-++..++.+++.+.
T Consensus 54 ~g~~vLDiGcG~-g~~~~~~~~~~~~~v~~~D~S~~~i~~~~~~~~ 98 (263)
T d2g72a1 54 SGRTLIDIGSGP-TVYQLLSACSHFEDITMTDFLEVNRQELGRWLQ 98 (263)
T ss_dssp CCSEEEEETCTT-CCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHT
T ss_pred CCcEEEEeccCC-CHHHHHHhcccCCeEEEEeCCHHHHHHHHHHHh
Confidence 789999999965 444444455556689999999999998887554
|
| >d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=88.62 E-value=0.21 Score=39.38 Aligned_cols=30 Identities=23% Similarity=0.308 Sum_probs=27.4
Q ss_pred EEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018158 188 IGIVGLGGLGHVAVKFGKAFGHHVTVISTS 217 (360)
Q Consensus 188 vlI~Gag~vG~~aiqla~~~G~~V~~~~~~ 217 (360)
|+|+|+|+.|+.++..|.+.|.+|.+++..
T Consensus 6 viIIGgGpAGl~aA~~aar~G~~V~viE~~ 35 (229)
T d3lada1 6 VIVIGAGPGGYVAAIKSAQLGLKTALIEKY 35 (229)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHHCCCeEEEEecc
Confidence 788899999999999999999999999854
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=88.58 E-value=0.2 Score=41.82 Aligned_cols=32 Identities=31% Similarity=0.482 Sum_probs=28.3
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
-|||+|+|..|+.++..|...|++|++++..+
T Consensus 18 DVlVIG~G~aGl~aA~~la~~G~~V~lvEK~~ 49 (308)
T d1y0pa2 18 DVVVVGSGGAGFSAAISATDSGAKVILIEKEP 49 (308)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 47999999999998888888999999999653
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=88.55 E-value=0.53 Score=35.88 Aligned_cols=91 Identities=14% Similarity=0.154 Sum_probs=53.7
Q ss_pred EEEEEcC-ChHHHHHHHHHHHc-CCeEEEEe-CCh-----hHHHHHHHHc-CC-C-eEeeCccHHHHHhcCCCcCEEEEc
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAF-GHHVTVIS-TSP-----SKEKEAKELL-GA-D-EFILSTNAMQMQAGKRTLDFILDT 255 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~-G~~V~~~~-~~~-----~~~~~~~~~~-g~-~-~~v~~~~~~~~~~~~~~~d~vid~ 255 (360)
+|.|+|+ |-+|+-+++++... ..++..+. ++. ++.......+ +. + ...... ........+|++|-|
T Consensus 3 kVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~dvvf~a 79 (179)
T d2g17a1 3 NTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMS---DVRDFSADVDVVFLA 79 (179)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEES---CGGGTCTTCCEEEEC
T ss_pred EEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccch---hhhhhhcccceeecc
Confidence 5889999 99999999999987 55655443 221 1122211111 11 1 111111 112224679999999
Q ss_pred CCCcccHHHHHHHhccCCEEEEeCC
Q 018158 256 VSAKHSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 256 ~g~~~~~~~~~~~l~~~G~~v~~g~ 280 (360)
.+...........+..+-++++.+.
T Consensus 80 lp~~~s~~~~~~~~~~~~~vIDlSa 104 (179)
T d2g17a1 80 TAHEVSHDLAPQFLQAGCVVFDLSG 104 (179)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEECSS
T ss_pred ccchhHHHHhhhhhhcCceeecccc
Confidence 9887655566666667777777753
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=88.55 E-value=0.2 Score=41.07 Aligned_cols=31 Identities=19% Similarity=0.207 Sum_probs=27.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTS 217 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~ 217 (360)
-|+|+|+|.+|+.++.-+...|.+|+++++.
T Consensus 5 DvvIIGaGi~Gls~A~~La~~G~~V~viE~~ 35 (281)
T d2gf3a1 5 DVIVVGAGSMGMAAGYQLAKQGVKTLLVDAF 35 (281)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 3899999999998888888889999999974
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=88.44 E-value=0.27 Score=39.94 Aligned_cols=33 Identities=21% Similarity=0.328 Sum_probs=30.4
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVIST 216 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~ 216 (360)
.|++|+|.|.|-+|..+++++...|++|+++..
T Consensus 35 ~g~~v~IQGfGnVG~~~a~~L~e~GakvvavsD 67 (255)
T d1bgva1 35 VGKTVALAGFGNVAWGAAKKLAELGAKAVTLSG 67 (255)
T ss_dssp TTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCeEEEEec
Confidence 689999999999999999999999999887764
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.43 E-value=0.48 Score=40.03 Aligned_cols=73 Identities=21% Similarity=0.169 Sum_probs=46.2
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC----------hhHHHHHHHHcC-CCeEe--eCccHHHHHhc--CCCc
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTS----------PSKEKEAKELLG-ADEFI--LSTNAMQMQAG--KRTL 249 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~----------~~~~~~~~~~~g-~~~~v--~~~~~~~~~~~--~~~~ 249 (360)
++|||+|+ |-+|..++..+...|.+|+++++. .++.......-. .-.++ |-.+.+.+... ...+
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~ 82 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF 82 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccccc
Confidence 68999999 999999999998899999998631 223333333111 11222 33343333332 5667
Q ss_pred CEEEEcCCC
Q 018158 250 DFILDTVSA 258 (360)
Q Consensus 250 d~vid~~g~ 258 (360)
++++.+++.
T Consensus 83 ~~i~h~Aa~ 91 (346)
T d1ek6a_ 83 MAVIHFAGL 91 (346)
T ss_dssp EEEEECCSC
T ss_pred ccccccccc
Confidence 788887763
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=88.39 E-value=0.34 Score=35.87 Aligned_cols=36 Identities=22% Similarity=0.152 Sum_probs=32.2
Q ss_pred CCCcEEEEE--cCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 183 PAKKRIGIV--GLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 183 ~~~~~vlI~--Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
.+++.++|+ |+|-+|+-+++.+..+|.+|+++.+.+
T Consensus 37 ~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~ 74 (156)
T d1djqa2 37 KIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 74 (156)
T ss_dssp CCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred ccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence 488888887 779999999999999999999999765
|
| >d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermotoga maritima [TaxId: 2336]
Probab=88.36 E-value=0.61 Score=35.14 Aligned_cols=95 Identities=13% Similarity=0.214 Sum_probs=56.9
Q ss_pred EEEEEcCChHHHHHHHHHHHc---CCeEEEEeC--ChhHHHHHHHHc----CC--CeE--------e--------eCccH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAF---GHHVTVIST--SPSKEKEAKELL----GA--DEF--------I--------LSTNA 239 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~---G~~V~~~~~--~~~~~~~~~~~~----g~--~~~--------v--------~~~~~ 239 (360)
+|.|.|-|-+|..+.+.+... ..+|+++-. +.+....+.+ + |. ..+ + +.+++
T Consensus 2 kIgINGfGRIGR~v~R~~~~~~~~~i~vvaINd~~~~e~~ayLlk-yDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~p 80 (169)
T d1hdgo1 2 RVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLK-YDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP 80 (169)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHH-CCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred EEEEECCChHHHHHHHHHHhccCCCEEEEEeccCccHHHHHHHHh-ccccccccCceEEEECCEEEECCEEEEEEeCCCh
Confidence 578999999999988877643 357666643 3344444444 3 20 011 1 11111
Q ss_pred HHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 240 MQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 240 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
+.+.=...++|+|+||+|.......+...+..|-+-|.+..+.
T Consensus 81 ~~i~W~~~gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP~ 123 (169)
T d1hdgo1 81 SKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPA 123 (169)
T ss_dssp GGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred hhCCccccCCCEEEEecceeccccchhhhccCCCceEEEeccc
Confidence 1110003479999999998777788888888876555554443
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=88.22 E-value=0.37 Score=37.27 Aligned_cols=39 Identities=23% Similarity=0.358 Sum_probs=32.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKE 226 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~ 226 (360)
+|.|+|.|-+|+..+.++ ..|.+|++++.++++.+.+++
T Consensus 2 kI~ViGlG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~~ 40 (196)
T d1dlja2 2 KIAVAGSGYVGLSLGVLL-SLQNEVTIVDILPSKVDKINN 40 (196)
T ss_dssp EEEEECCSHHHHHHHHHH-TTTSEEEEECSCHHHHHHHHT
T ss_pred EEEEECCChhHHHHHHHH-HCCCcEEEEECCHHHHHHHhh
Confidence 478889999999876655 469999999999998887765
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=88.05 E-value=1.4 Score=32.20 Aligned_cols=69 Identities=26% Similarity=0.362 Sum_probs=42.9
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHHH-HHHH------cCCCeEeeCccHHHHHhcCCCcCEEEEcC
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEKE-AKEL------LGADEFILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~~-~~~~------~g~~~~v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
++|.|+|+|.+|...+..+...|. ++..++.++++.+- +... ++....+...+. +.-++.|+|+-+.
T Consensus 2 kKI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~----~~l~~adiVVita 77 (146)
T d1hyha1 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW----AALADADVVISTL 77 (146)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG----GGGTTCSEEEECC
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH----HHhccccEEEEec
Confidence 578899999999988887777774 78899988775321 1110 111112211111 1246789999888
Q ss_pred CC
Q 018158 257 SA 258 (360)
Q Consensus 257 g~ 258 (360)
|.
T Consensus 78 G~ 79 (146)
T d1hyha1 78 GN 79 (146)
T ss_dssp SC
T ss_pred cc
Confidence 74
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=88.04 E-value=0.28 Score=41.33 Aligned_cols=32 Identities=25% Similarity=0.198 Sum_probs=29.5
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTS 217 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~ 217 (360)
+++||+|+ |-+|..++..+...|++|+++++.
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~ 34 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR 34 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence 67999999 999999999999999999999974
|
| >d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=87.98 E-value=0.23 Score=39.52 Aligned_cols=31 Identities=29% Similarity=0.333 Sum_probs=27.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGHHVTVISTS 217 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~ 217 (360)
-|+|+|+|+.|+.++..|.++|.+|.+++..
T Consensus 5 DviVIG~GpaGl~aA~~aa~~G~kV~viE~~ 35 (235)
T d1h6va1 5 DLIIIGGGSGGLAAAKEAAKFDKKVMVLDFV 35 (235)
T ss_dssp EEEEECCSHHHHHHHHHHGGGCCCEEEECCC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEecc
Confidence 3789999999999999999999999999843
|
| >d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=87.93 E-value=1.1 Score=33.60 Aligned_cols=95 Identities=18% Similarity=0.218 Sum_probs=59.0
Q ss_pred EEEEEcCChHHHHHHHHHHHc-CCeEEEEeC---ChhHHHHHHHHcCC------CeE--------e--------eCccHH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAF-GHHVTVIST---SPSKEKEAKELLGA------DEF--------I--------LSTNAM 240 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~---~~~~~~~~~~~~g~------~~~--------v--------~~~~~~ 240 (360)
+|-|-|-|-+|.++...+... ..+|.++-. +.+....+.+ +-. ..+ + ..+++.
T Consensus 2 kigINGfGRIGR~v~R~~~~~~~~~iv~INd~~~d~~~~ayLlk-yDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p~ 80 (166)
T d2b4ro1 2 KLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLK-YDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPS 80 (166)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHH-CCTTTCSCSSCEEEETTEEEESSCEEEEECCSSGG
T ss_pred eEEEECCCHHHHHHHHHHhhCCCcEEEEECCCCCChHHhhhhhh-cccccccceeeeccCCceEEecCcEEEEEeCCChH
Confidence 477889999999988887754 457666642 3455666655 421 111 1 111111
Q ss_pred HHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 241 QMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 241 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
...=...++|+|+||+|.......+...+..|-+-|.+..+.
T Consensus 81 ~i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~ 122 (166)
T d2b4ro1 81 QIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPP 122 (166)
T ss_dssp GCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred HccccccCCCEEEEecccccchhhhhhhhccCCCEEEEeccc
Confidence 110013489999999998777778888888876555554443
|
| >d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]
Probab=87.83 E-value=0.18 Score=41.50 Aligned_cols=34 Identities=26% Similarity=0.339 Sum_probs=27.9
Q ss_pred CcEEEEEcCChHHHHHHH-HHHHcCCeEEEEeCCh
Q 018158 185 KKRIGIVGLGGLGHVAVK-FGKAFGHHVTVISTSP 218 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiq-la~~~G~~V~~~~~~~ 218 (360)
...|+|+|+|+.|+.++. ||+..|.+|.++++.+
T Consensus 33 e~DViVIGaGpaGL~aA~~LA~~~G~~V~vlE~~~ 67 (278)
T d1rp0a1 33 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV 67 (278)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHccCCeEEEEecCC
Confidence 345899999999997665 5676799999999765
|
| >d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Cystathionine beta-synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.69 E-value=2 Score=36.36 Aligned_cols=95 Identities=18% Similarity=0.116 Sum_probs=63.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeC---ChhHHHHHHHHcCCCeEeeCcc--------H-------------
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVIST---SPSKEKEAKELLGADEFILSTN--------A------------- 239 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~---~~~~~~~~~~~~g~~~~v~~~~--------~------------- 239 (360)
+++.|+...+|..|.+++..|+.+|.+.+++.. ++++.+.++. +|++-+..... .
T Consensus 96 ~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~-~GA~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (355)
T d1jbqa_ 96 PGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRA-LGAEIVRTPTNARFDSPESHVGVAWRLKNEIPN 174 (355)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHH-TTCEEEECCC-------CCHHHHHHHHHHHSTT
T ss_pred cCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHh-cCCeEEEecccccchhhhhhhhHHHHHHHhccc
Confidence 667666666699999999999999998665553 4567888888 99864431100 0
Q ss_pred ----------------------HHHHhcCCCcCEEEEcCCCcccH---HHHHHHhccCCEEEEeC
Q 018158 240 ----------------------MQMQAGKRTLDFILDTVSAKHSL---GPILELLKVNGTLSVVG 279 (360)
Q Consensus 240 ----------------------~~~~~~~~~~d~vid~~g~~~~~---~~~~~~l~~~G~~v~~g 279 (360)
+...+.+..+|+++-++|+...+ ...+....+.-+++.+.
T Consensus 175 ~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~ve 239 (355)
T d1jbqa_ 175 SHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVD 239 (355)
T ss_dssp EECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred cccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCcceEEeec
Confidence 00011245699999999976544 34445555677777664
|
| >d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Possible histamine N-methyltransferase TM1293 species: Thermotoga maritima [TaxId: 2336]
Probab=87.58 E-value=0.26 Score=38.42 Aligned_cols=88 Identities=22% Similarity=0.240 Sum_probs=57.8
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCC-----
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSA----- 258 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~----- 258 (360)
++.+||=+|+|. |..+..+ .++++++.+++.++.+++ -+.. ++.... .........+|+|+....-
T Consensus 36 ~~~~vLDiGcG~-G~~~~~~-----~~~~giD~s~~~~~~a~~-~~~~-~~~~d~-~~l~~~~~~fD~I~~~~~l~h~~d 106 (208)
T d1vlma_ 36 PEGRGVEIGVGT-GRFAVPL-----KIKIGVEPSERMAEIARK-RGVF-VLKGTA-ENLPLKDESFDFALMVTTICFVDD 106 (208)
T ss_dssp CSSCEEEETCTT-STTHHHH-----TCCEEEESCHHHHHHHHH-TTCE-EEECBT-TBCCSCTTCEEEEEEESCGGGSSC
T ss_pred CCCeEEEECCCC-ccccccc-----ceEEEEeCChhhcccccc-cccc-cccccc-cccccccccccccccccccccccc
Confidence 677899999953 5444444 357899999999999888 4433 222211 1122224679999875431
Q ss_pred -cccHHHHHHHhccCCEEEEeCC
Q 018158 259 -KHSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 259 -~~~~~~~~~~l~~~G~~v~~g~ 280 (360)
...++.+.+.|++||.++....
T Consensus 107 ~~~~l~~~~~~L~pgG~l~i~~~ 129 (208)
T d1vlma_ 107 PERALKEAYRILKKGGYLIVGIV 129 (208)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccchhhhhhcCCCCceEEEEec
Confidence 1246889999999999877643
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=87.30 E-value=2.2 Score=31.57 Aligned_cols=72 Identities=14% Similarity=0.216 Sum_probs=47.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHH-HHHHHH------cCCCeEeeCccHHHHHhcCCCcCEEEE
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKE-KEAKEL------LGADEFILSTNAMQMQAGKRTLDFILD 254 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~-~~~~~~------~g~~~~v~~~~~~~~~~~~~~~d~vid 254 (360)
+..+|.|+|+|.+|...+..+...|. ++..++.++++. ..+... .+...++...+. +.-++.|+|+-
T Consensus 19 ~~~KV~IIGaG~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~----~~~~~adiVVi 94 (160)
T d1i0za1 19 PNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY----SVTANSKIVVV 94 (160)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG----GGGTTCSEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccch----hhcccccEEEE
Confidence 56789999999999999999998886 699999876643 222220 111222222221 12467899998
Q ss_pred cCCCc
Q 018158 255 TVSAK 259 (360)
Q Consensus 255 ~~g~~ 259 (360)
++|..
T Consensus 95 tAg~~ 99 (160)
T d1i0za1 95 TAGVR 99 (160)
T ss_dssp CCSCC
T ss_pred ecCCc
Confidence 88843
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=87.25 E-value=0.41 Score=33.62 Aligned_cols=35 Identities=20% Similarity=0.149 Sum_probs=27.9
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcC---CeEEEEeCCh
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFG---HHVTVISTSP 218 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G---~~V~~~~~~~ 218 (360)
.+++++|+|+|.+|+-++..+..+| .+|+++.+.+
T Consensus 19 ~p~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~~ 56 (117)
T d1aoga2 19 PPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGE 56 (117)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred cCCeEEEECCcHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence 5589999999999998777766655 4699998754
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=87.09 E-value=0.5 Score=36.18 Aligned_cols=93 Identities=13% Similarity=0.159 Sum_probs=54.7
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHcC---CCeEeeCccHHHHHhcCCCcCEEEEcCCCc
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFG-HHVTVISTSPSKEKEAKELLG---ADEFILSTNAMQMQAGKRTLDFILDTVSAK 259 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G-~~V~~~~~~~~~~~~~~~~~g---~~~~v~~~~~~~~~~~~~~~d~vid~~g~~ 259 (360)
.-+|.|+|+ |-+|+-.++++...- .++..+..+...-..+.+.+. ......... .......+.|++|.+.+..
T Consensus 5 kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dvvf~alp~~ 82 (183)
T d2cvoa1 5 EVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLPNLVA--VKDADFSNVDAVFCCLPHG 82 (183)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCCCCCBC--GGGCCGGGCSEEEECCSSS
T ss_pred ccEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccccccccccchh--hhhhhhcccceeeeccccc
Confidence 346899999 999999999999764 466666533322222222111 110000000 1112245799999999987
Q ss_pred ccHHHHHHHhccCCEEEEeCC
Q 018158 260 HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 260 ~~~~~~~~~l~~~G~~v~~g~ 280 (360)
.. ......+...+.++....
T Consensus 83 ~s-~~~~~~l~~~~~~v~~~~ 102 (183)
T d2cvoa1 83 TT-QEIIKGLPQELKIVDLSA 102 (183)
T ss_dssp HH-HHHHHTSCSSCEEEECSS
T ss_pred hH-HHHHHHHHhcCcccccch
Confidence 54 455567777788776543
|
| >d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=86.61 E-value=0.28 Score=41.16 Aligned_cols=32 Identities=25% Similarity=0.384 Sum_probs=28.1
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTS 217 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~ 217 (360)
--|||+|+|..|+.++..|...|++|++++..
T Consensus 20 ~DVvVIGaG~aGl~AA~~aa~~G~~V~vlEK~ 51 (317)
T d1qo8a2 20 TQVLVVGAGSAGFNASLAAKKAGANVILVDKA 51 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred cCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 34789999999999988888899999999864
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=86.50 E-value=0.63 Score=34.46 Aligned_cols=35 Identities=11% Similarity=0.144 Sum_probs=29.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCh
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHH-VTVISTSP 218 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~-V~~~~~~~ 218 (360)
.+++|+|+|+|-+|.-.+..+.+.|++ |+++.+.+
T Consensus 44 ~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr~ 79 (153)
T d1gtea3 44 IRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 79 (153)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeCC
Confidence 567899999999999999988899985 88887653
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=86.31 E-value=0.29 Score=36.47 Aligned_cols=133 Identities=10% Similarity=0.048 Sum_probs=74.2
Q ss_pred CcEEEEEcC-ChHHHHHHHHHHHcCC---eEEEEeCChhHHHHHHHHcCCCeEeeCccH----HHHHhcCCCcCEEEEcC
Q 018158 185 KKRIGIVGL-GGLGHVAVKFGKAFGH---HVTVISTSPSKEKEAKELLGADEFILSTNA----MQMQAGKRTLDFILDTV 256 (360)
Q Consensus 185 ~~~vlI~Ga-g~vG~~aiqla~~~G~---~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~----~~~~~~~~~~d~vid~~ 256 (360)
|-+|.|+|| |-+|.-.++++..... ++..++.+.. .|- .+.+.... ..........|+++-+.
T Consensus 1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s--------~G~-~~~~~~~~~~~~~~~~~~~~~~d~~f~~~ 71 (154)
T d2gz1a1 1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARS--------AGK-SLKFKDQDITIEETTETAFEGVDIALFSA 71 (154)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGG--------TTC-EEEETTEEEEEEECCTTTTTTCSEEEECS
T ss_pred CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccccc--------ccc-cccccCCcccccccchhhhhhhhhhhhcc
Confidence 457999999 9999999999988753 4555553321 221 11100000 01111246789999999
Q ss_pred CCcccHHHHHHHhccCCEEEEeCCCC---CCcccChhhH----hccCcEEEEeecCCHHHHHHHHHHHhcCCCccce
Q 018158 257 SAKHSLGPILELLKVNGTLSVVGAPE---APFELPSFPL----IFGKRSVKGSMTGGMRETQEMMNVCGKYNITCNI 326 (360)
Q Consensus 257 g~~~~~~~~~~~l~~~G~~v~~g~~~---~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~l~~~~l~~~i 326 (360)
+..............+.++++.+.-. ...+.....+ ..+...+.....-....+..+.-+++++.+++..
T Consensus 72 ~~~~s~~~~~~~~~~~~~VIDlSsdfR~~~~~~~~~pe~n~~~~~~~~~iIAnPgC~tt~i~~l~PL~~~~lik~~~ 148 (154)
T d2gz1a1 72 GSSTSAKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIACPNAAWNSVQIAETLHERGLVRPTA 148 (154)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCHHHHGGGGGGCCSEEECCCTHHHHHHHHHHHHHTTCCSCCS
T ss_pred CccchhhHHhhhccccceehhcChhhhccCCcccccchhhHHHhcCcCceEECCCCHHHHHHHHHHHHHhcCCCccc
Confidence 87766677777888888999886532 1222222221 1222223322221222234455677777777653
|
| >d1p3ha_ b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: GroES domain: Chaperonin-10 (GroES) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=86.30 E-value=0.56 Score=31.91 Aligned_cols=23 Identities=22% Similarity=0.310 Sum_probs=18.8
Q ss_pred cceEEEEecCCCC----------CCCCCCEEEe
Q 018158 73 ITGIITKVGSNVK----------NFKVGDRAAV 95 (360)
Q Consensus 73 ~~G~V~~vG~~v~----------~~~~Gd~V~~ 95 (360)
..|+|+++|++.. ..++||+|+.
T Consensus 38 ~~G~VvavG~g~~~~~~~~~~~~~vk~GD~Vl~ 70 (99)
T d1p3ha_ 38 QEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIY 70 (99)
T ss_dssp EEEEEEEECCCEECSSSSCEECCSCCTTCEEEE
T ss_pred eEEEEEEECCceEcCCCCEecCCeeecCCEEEE
Confidence 4699999999742 3789999986
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.23 E-value=0.37 Score=40.74 Aligned_cols=32 Identities=25% Similarity=0.254 Sum_probs=28.5
Q ss_pred EE-EEEcC-ChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 187 RI-GIVGL-GGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 187 ~v-lI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
+| ||+|+ |-+|..++..+...|++|+++++..
T Consensus 2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~ 35 (347)
T d1t2aa_ 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRS 35 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence 46 99999 9999999999888999999999854
|
| >d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella putrefaciens [TaxId: 24]
Probab=85.99 E-value=0.32 Score=40.86 Aligned_cols=31 Identities=29% Similarity=0.524 Sum_probs=27.7
Q ss_pred EEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 188 IGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 188 vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
|+|+|+|..|+.++..|...|++|++++..+
T Consensus 26 VvVIG~G~aGl~aA~~la~~G~~V~llEk~~ 56 (322)
T d1d4ca2 26 VVIIGSGGAGLAAAVSARDAGAKVILLEKEP 56 (322)
T ss_dssp EEEECSSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 8999999999998888888899999999653
|
| >d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO species: Pig (Sus scrofa) [TaxId: 9823]
Probab=85.89 E-value=0.33 Score=42.09 Aligned_cols=32 Identities=22% Similarity=0.312 Sum_probs=25.3
Q ss_pred EEEEEcCChHHHHHHH-HHH-----HcCCeEEEEeCCh
Q 018158 187 RIGIVGLGGLGHVAVK-FGK-----AFGHHVTVISTSP 218 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiq-la~-----~~G~~V~~~~~~~ 218 (360)
-|+|+|+|+.|++++. ||+ ..|.+|.++++..
T Consensus 34 DViIVGgGPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~ 71 (380)
T d2gmha1 34 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAA 71 (380)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSS
T ss_pred CEEEECCCHHHHHHHHHHHhhhhhhcCCCEEEEEcCCC
Confidence 5899999999987654 444 2789999999764
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=85.74 E-value=2.7 Score=30.38 Aligned_cols=68 Identities=12% Similarity=0.140 Sum_probs=43.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHHH-------HHHHcCC-CeEeeCccHHHHHhcCCCcCEEEEcC
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEKE-------AKELLGA-DEFILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~~-------~~~~~g~-~~~v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
+|.|+|+|.+|...+.++...|. ++..++.++++.+- +...++. ..+....+. +.-++.|+|+-+.
T Consensus 2 KI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~----~~~~~adiVvita 77 (142)
T d1ojua1 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY----SLLKGSEIIVVTA 77 (142)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG----GGGTTCSEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH----HHhccccEEEEec
Confidence 47788999999988887777775 69999988765321 1111222 122222222 2346899999888
Q ss_pred CC
Q 018158 257 SA 258 (360)
Q Consensus 257 g~ 258 (360)
|.
T Consensus 78 g~ 79 (142)
T d1ojua1 78 GL 79 (142)
T ss_dssp CC
T ss_pred cc
Confidence 74
|
| >d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Fumarate reductase species: Wolinella succinogenes [TaxId: 844]
Probab=85.66 E-value=0.33 Score=40.90 Aligned_cols=31 Identities=26% Similarity=0.196 Sum_probs=27.9
Q ss_pred EEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 188 IGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 188 vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
|||+|+|+.|+.++.-|...|++|++++..+
T Consensus 8 VvVIG~G~AGl~AAl~aa~~G~~V~liEK~~ 38 (336)
T d2bs2a2 8 SLVIGGGLAGLRAAVATQQKGLSTIVLSLIP 38 (336)
T ss_dssp EEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 8999999999999888888999999998653
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=85.44 E-value=0.38 Score=39.85 Aligned_cols=31 Identities=29% Similarity=0.350 Sum_probs=25.6
Q ss_pred EEEEEcCChHHHHHHHHHHHcCC-eEEEEeCC
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGH-HVTVISTS 217 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~ 217 (360)
.|+|+|+|.+|++++..+...|. +|++++++
T Consensus 3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~ 34 (305)
T d1pj5a2 3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG 34 (305)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 48999999999987766666787 69999875
|
| >d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein PH1948 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=85.35 E-value=0.57 Score=36.46 Aligned_cols=68 Identities=12% Similarity=0.116 Sum_probs=42.7
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHH---cCCCeEeeCccHHHHHhcCCCcCEEEEcC
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKEL---LGADEFILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~---~g~~~~v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
.|++||=.|+|. |.+++.++ ..|+ +|++++.+++..+.+++. ++...-+...+ ......++|+||---
T Consensus 46 ~g~~vLDlg~Gt-G~l~i~a~-~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d---~~~~~~~fD~Vi~nP 117 (201)
T d1wy7a1 46 EGKVVADLGAGT-GVLSYGAL-LLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGD---VSEFNSRVDIVIMNP 117 (201)
T ss_dssp TTCEEEEETCTT-CHHHHHHH-HTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESC---GGGCCCCCSEEEECC
T ss_pred CCCEEEECcCcc-hHHHHHHH-HcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECc---hhhhCCcCcEEEEcC
Confidence 688888888843 44444544 4576 799999999988888774 23322221112 123467899988533
|
| >d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Haemophilus influenzae [TaxId: 727]
Probab=85.00 E-value=2.6 Score=34.83 Aligned_cols=50 Identities=20% Similarity=0.168 Sum_probs=37.2
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeC---ChhHHHHHHHHcCCCeEe
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVIST---SPSKEKEAKELLGADEFI 234 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~---~~~~~~~~~~~~g~~~~v 234 (360)
++++|+...+|.-|++++..++..|.+.+++.. +..+.+.++. +|++.+.
T Consensus 60 ~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~-~GA~vv~ 112 (310)
T d1y7la1 60 KGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCG-LGVNLVL 112 (310)
T ss_dssp TTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHH-TTCEEEE
T ss_pred CCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHH-hCCceEe
Confidence 777766666699999999999999997554443 3456677777 8986554
|
| >d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]
Probab=84.90 E-value=0.88 Score=34.31 Aligned_cols=95 Identities=13% Similarity=0.253 Sum_probs=56.2
Q ss_pred EEEEEcCChHHHHHHHHHHHc-CCeEEEEeC--ChhHHHHHHHHcCC------CeE--------e--------eCccHHH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAF-GHHVTVIST--SPSKEKEAKELLGA------DEF--------I--------LSTNAMQ 241 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~-G~~V~~~~~--~~~~~~~~~~~~g~------~~~--------v--------~~~~~~~ 241 (360)
+|-|.|-|-+|.++...+... ..+|.++-. +.+....+.+ +.. ..+ + ...++..
T Consensus 3 kIgINGfGRIGR~v~R~~l~~~~~~ivaINd~~d~~~~ayll~-yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~p~~ 81 (171)
T d3cmco1 3 KVGINGFGRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLK-YDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDPEN 81 (171)
T ss_dssp EEEEESCSHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHHH-EETTTEECSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred EEEEECCCHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHhhhhc-ccccCCcccccccccCCCEEeCCcceeeEecCCHHH
Confidence 577889999999888777644 456666653 2333444433 321 000 1 1111111
Q ss_pred HHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 242 MQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 242 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
..=...++|+|+||+|.....+.+...+..+-+-|.+..+.
T Consensus 82 i~W~~~~vDiViEcTG~f~t~~~~~~hl~~gakkViiSap~ 122 (171)
T d3cmco1 82 LAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPA 122 (171)
T ss_dssp CCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred ccccccCCcEEEEecCccCCHHHHHHHHhCCCceEEEeccc
Confidence 00013579999999998877788888888876555554443
|
| >d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GidA-like domain: GidA-related protein TTHA1897 species: Thermus thermophilus [TaxId: 274]
Probab=84.88 E-value=0.58 Score=37.26 Aligned_cols=32 Identities=25% Similarity=0.225 Sum_probs=28.7
Q ss_pred EEEEcCChHHHHHHHHHHHcCCeEEEEeCChh
Q 018158 188 IGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS 219 (360)
Q Consensus 188 vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~ 219 (360)
|+|+|+|+.|+-|+..+-++|+++.++..+.+
T Consensus 5 VIVIGgG~AG~eAA~~aAR~G~ktllit~~~~ 36 (230)
T d2cula1 5 VLIVGAGFSGAETAFWLAQKGVRVGLLTQSLD 36 (230)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESCGG
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEEeccc
Confidence 78999999999999999999999999887643
|
| >d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: NOL1/NOP2/sun domain: Hypothetical methyltransferase PH1374 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=84.71 E-value=3.5 Score=34.15 Aligned_cols=96 Identities=18% Similarity=0.205 Sum_probs=58.4
Q ss_pred CCCCcEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHH---cCCCeEee-CccHHHHHhcCCCcCEEE-E
Q 018158 182 SPAKKRIGIVGLGGLGHVAVKFGKAFG--HHVTVISTSPSKEKEAKEL---LGADEFIL-STNAMQMQAGKRTLDFIL-D 254 (360)
Q Consensus 182 ~~~~~~vlI~Gag~vG~~aiqla~~~G--~~V~~~~~~~~~~~~~~~~---~g~~~~v~-~~~~~~~~~~~~~~d~vi-d 254 (360)
.++|++||=..|++=|. +.+++..++ ..+++.+.++.|...+++. +|...++. ..+..........||.|+ |
T Consensus 114 ~~~g~~vlD~CAapGgK-t~~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~d~~~~~~~~~~fD~ILvD 192 (313)
T d1ixka_ 114 PKPGEIVADMAAAPGGK-TSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLD 192 (313)
T ss_dssp CCTTCEEEECCSSCSHH-HHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEE
T ss_pred CCccceeeecccchhhh-hHhhhhhcccccceeeeccCHHHHHHHHHHHHHHHhhccccccccccccccccccccEEEEc
Confidence 34999987764433233 334454444 4699999999988776543 66544433 223323333466788886 4
Q ss_pred --cCCCc-------------------------ccHHHHHHHhccCCEEEEe
Q 018158 255 --TVSAK-------------------------HSLGPILELLKVNGTLSVV 278 (360)
Q Consensus 255 --~~g~~-------------------------~~~~~~~~~l~~~G~~v~~ 278 (360)
|+|.. ..+..++.++++||++|..
T Consensus 193 aPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~gG~lVYs 243 (313)
T d1ixka_ 193 APCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYS 243 (313)
T ss_dssp CCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCCcEEEEe
Confidence 45432 2356777888888887655
|
| >d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=84.64 E-value=0.47 Score=38.42 Aligned_cols=30 Identities=20% Similarity=0.309 Sum_probs=27.6
Q ss_pred EEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018158 188 IGIVGLGGLGHVAVKFGKAFGHHVTVISTS 217 (360)
Q Consensus 188 vlI~Gag~vG~~aiqla~~~G~~V~~~~~~ 217 (360)
++|+|+|+.|+.++..|..+|.+|.++++.
T Consensus 4 viVIG~G~aG~~aA~~aa~~G~~V~liE~~ 33 (259)
T d1onfa1 4 LIVIGGGSGGMAAARRAARHNAKVALVEKS 33 (259)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEECCCHHHHHHHHHHHHCCCeEEEEecC
Confidence 688999999999999999999999999864
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=84.57 E-value=2.8 Score=34.83 Aligned_cols=93 Identities=13% Similarity=0.058 Sum_probs=58.5
Q ss_pred CCcEEEEEcC--ChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHc---CC--C--eEeeCccHHHHH---hcCCCcC
Q 018158 184 AKKRIGIVGL--GGLGHVAVKFGKAFGH-HVTVISTSPSKEKEAKELL---GA--D--EFILSTNAMQMQ---AGKRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Ga--g~vG~~aiqla~~~G~-~V~~~~~~~~~~~~~~~~~---g~--~--~~v~~~~~~~~~---~~~~~~d 250 (360)
+|++||=..+ |+.++ .++ ..|+ +|+.++.++...+.+++.+ |. + .++..+-.+.++ ..+..||
T Consensus 144 ~g~~VLdlf~~~G~~sl---~aa-~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~~l~~~~~~~~~fD 219 (317)
T d2b78a2 144 AGKTVLNLFSYTAAFSV---AAA-MGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYD 219 (317)
T ss_dssp BTCEEEEETCTTTHHHH---HHH-HTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCceeecCCCCcHHHH---HHH-hCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHHHHHHHHHhhcCCCC
Confidence 8999988755 55443 333 3577 6999999998888777653 32 2 233333333332 2367899
Q ss_pred EEEEcCCC---------------cccHHHHHHHhccCCEEEEeCC
Q 018158 251 FILDTVSA---------------KHSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 251 ~vid~~g~---------------~~~~~~~~~~l~~~G~~v~~g~ 280 (360)
+||-=-+. ...+..+++++++||.++....
T Consensus 220 ~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~sc 264 (317)
T d2b78a2 220 IIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN 264 (317)
T ss_dssp EEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 99842111 0235667889999999987644
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=84.57 E-value=0.6 Score=32.87 Aligned_cols=85 Identities=11% Similarity=0.060 Sum_probs=49.0
Q ss_pred CCcEEEEEcCChH-----------HHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcC-CCeEee-CccHHHHHhc--CCC
Q 018158 184 AKKRIGIVGLGGL-----------GHVAVKFGKAFGHHVTVISTSPSKEKEAKELLG-ADEFIL-STNAMQMQAG--KRT 248 (360)
Q Consensus 184 ~~~~vlI~Gag~v-----------G~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g-~~~~v~-~~~~~~~~~~--~~~ 248 (360)
..++|||+|+|+. +.-++..+|..|++++.+..+++....- +. ++.++. +-..+....+ ..+
T Consensus 3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd---~d~aD~lYfeplt~e~v~~Ii~~E~ 79 (121)
T d1a9xa4 3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTD---YDTSDRLYFEPVTLEDVLEIVRIEK 79 (121)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTS---TTSSSEEECCCCSHHHHHHHHHHHC
T ss_pred CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcC---hhhcCceEEccCCHHHHHHHHHHhC
Confidence 4578999999763 3455666677899999999888753321 12 333332 2222222222 345
Q ss_pred cCEEEEcCCCcccHHHHHHHhcc
Q 018158 249 LDFILDTVSAKHSLGPILELLKV 271 (360)
Q Consensus 249 ~d~vid~~g~~~~~~~~~~~l~~ 271 (360)
.|.|+-..|+..+++.+..+-+.
T Consensus 80 p~~ii~~~GGQtalnla~~L~~~ 102 (121)
T d1a9xa4 80 PKGVIVQYGGQTPLKLARALEAA 102 (121)
T ss_dssp CSEEECSSSTHHHHTTHHHHHHT
T ss_pred CCEEEeehhhhhHHHHHHHHHHc
Confidence 67777777766555555444333
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=84.33 E-value=2.1 Score=31.67 Aligned_cols=70 Identities=19% Similarity=0.304 Sum_probs=44.7
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHH-HHHHH------cCCCeEeeCccHHHHHhcCCCcCEEEEcC
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEK-EAKEL------LGADEFILSTNAMQMQAGKRTLDFILDTV 256 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~-~~~~~------~g~~~~v~~~~~~~~~~~~~~~d~vid~~ 256 (360)
.+|.|+|+|.+|..++..+...|. ++..++.++++.. .+... ++...++...+. ..-.+.|+|+-+.
T Consensus 20 ~KI~IIGaG~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~----~~~~~adivvita 95 (159)
T d2ldxa1 20 CKITVVGVGDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY----NVSANSKLVIITA 95 (159)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG----GGGTTEEEEEECC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch----hhhccccEEEEec
Confidence 468889999999999888888876 6999998876432 22220 121222211121 1236789999888
Q ss_pred CCc
Q 018158 257 SAK 259 (360)
Q Consensus 257 g~~ 259 (360)
|..
T Consensus 96 g~~ 98 (159)
T d2ldxa1 96 GAR 98 (159)
T ss_dssp SCC
T ss_pred ccc
Confidence 753
|
| >d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=84.33 E-value=1.2 Score=33.66 Aligned_cols=95 Identities=12% Similarity=0.150 Sum_probs=54.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcC---CeEEEEeCC--hhHHHHHHHHcCC------CeE---------eeCccH-----HH
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFG---HHVTVISTS--PSKEKEAKELLGA------DEF---------ILSTNA-----MQ 241 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G---~~V~~~~~~--~~~~~~~~~~~g~------~~~---------v~~~~~-----~~ 241 (360)
+|.|.|-|-+|.++.+.+.... .+|+++-.. .+....+.+ +-. ..+ ++.+.- ..
T Consensus 2 kIgINGfGRIGR~v~R~~~~~~~~~i~ivaINd~~~~~~~ayLlk-yDSvhG~~~~~i~~~~~~~~~ing~~I~~~~~~~ 80 (172)
T d1rm4a1 2 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLK-YDSILGTFDADVKTAGDSAISVDGKVIKVVSDRN 80 (172)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECTTCHHHHHHHHH-CCTTTCSCSSCEEECTTSEEEETTEEEEEECCSC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEEcCCCCHHHHHHHHh-cCcccccccceeEecCCcceEECCEEEEEecCCC
Confidence 5788899999999988766443 455555432 223333333 321 111 111110 00
Q ss_pred HHhc---CCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCCC
Q 018158 242 MQAG---KRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 242 ~~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
..++ ..++|+|+||+|.......+...+..|-+-|.+..+.
T Consensus 81 p~~i~W~~~gvDiViEcTG~f~~~~~~~~hl~~GakkViiSAP~ 124 (172)
T d1rm4a1 81 PVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPG 124 (172)
T ss_dssp GGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSCEEESSCC
T ss_pred hHHCChhhcCCCEEEecCceEccHHHHHHHHhcCCceEEeeccc
Confidence 1111 3479999999998766778888888876555554433
|
| >d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Threonine deaminase species: Escherichia coli [TaxId: 562]
Probab=84.06 E-value=4.4 Score=33.67 Aligned_cols=94 Identities=11% Similarity=0.099 Sum_probs=60.6
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeC---ChhHHHHHHHHcCCCeEeeCccHHHH------------------
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVIST---SPSKEKEAKELLGADEFILSTNAMQM------------------ 242 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~---~~~~~~~~~~~~g~~~~v~~~~~~~~------------------ 242 (360)
+..+|+...+|..|.+++..++..|.+++++.. +.++.+.++. +|++-+....+....
T Consensus 74 ~~~~vv~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~-~Ga~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (331)
T d1tdja1 74 KAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRG-FGGEVLLHGANFDEAKAKAIELSQQQGFTWVPP 152 (331)
T ss_dssp CSSSCEEEECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHH-HSCEEECCCSSHHHHHHHHHHHHHHHCCEECCS
T ss_pred CCCeeeecccchhHHHHHHhhccccccceeeccccchhHHHHHHHh-cCCEEEEcCcccccchhhhhhhhhcCCCccccc
Confidence 455566666688999999999999998666654 3456777777 898655422211000
Q ss_pred -----------------HhcCCCcCEEEEcCCCcccH---HHHHHHhccCCEEEEe
Q 018158 243 -----------------QAGKRTLDFILDTVSAKHSL---GPILELLKVNGTLSVV 278 (360)
Q Consensus 243 -----------------~~~~~~~d~vid~~g~~~~~---~~~~~~l~~~G~~v~~ 278 (360)
.+....+|++|-++|+...+ ...+..+.+..+++.+
T Consensus 153 ~~~~~~~~g~~t~~~Ei~~q~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~v 208 (331)
T d1tdja1 153 FDHPMVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAV 208 (331)
T ss_dssp SCCHHHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred cCChHHhhhhhhHHHHHHHhcCCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEe
Confidence 11145699999999876543 3444555566677766
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=83.99 E-value=1.5 Score=32.81 Aligned_cols=73 Identities=14% Similarity=0.226 Sum_probs=43.2
Q ss_pred CCcEEEEEcCChHHH--HHHHHHHHc-C---CeEEEEeCChhHHHHHHH-------HcCCC-eEeeCccHHHHHhcCCCc
Q 018158 184 AKKRIGIVGLGGLGH--VAVKFGKAF-G---HHVTVISTSPSKEKEAKE-------LLGAD-EFILSTNAMQMQAGKRTL 249 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~--~aiqla~~~-G---~~V~~~~~~~~~~~~~~~-------~~g~~-~~v~~~~~~~~~~~~~~~ 249 (360)
+.-+|.|+|+|.+|. +...+++.. . .+++.++.++++++.... .++.. .+....+. .+.-++.
T Consensus 2 k~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~---~eal~~A 78 (167)
T d1u8xx1 2 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDP---EEAFTDV 78 (167)
T ss_dssp CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCH---HHHHSSC
T ss_pred CCceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCCh---hhccCCC
Confidence 456788999976653 333444433 2 379999999988653211 13332 22222222 2234689
Q ss_pred CEEEEcCCCc
Q 018158 250 DFILDTVSAK 259 (360)
Q Consensus 250 d~vid~~g~~ 259 (360)
|+|+.++|..
T Consensus 79 D~Vvitag~~ 88 (167)
T d1u8xx1 79 DFVMAHIRVG 88 (167)
T ss_dssp SEEEECCCTT
T ss_pred CEEEECCCcC
Confidence 9999999864
|
| >d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class I ketol-acid reductoisomerase (KARI) species: Pseudomonas aeruginosa [TaxId: 287]
Probab=83.91 E-value=3.2 Score=31.09 Aligned_cols=86 Identities=26% Similarity=0.274 Sum_probs=60.3
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcccH
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPS-KEKEAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKHSL 262 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~-~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~~~ 262 (360)
++++|.|+|-|.-|.+-++-+|-.|.+|++--+... ..+.+++ -|.+ +. ...++.+..|+|.-.+.+.. .
T Consensus 15 k~k~IaViGYGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~-~Gf~-v~------~~~eA~~~aDiim~L~PD~~-q 85 (182)
T d1np3a2 15 QGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEA-HGLK-VA------DVKTAVAAADVVMILTPDEF-Q 85 (182)
T ss_dssp HTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHH-TTCE-EE------CHHHHHHTCSEEEECSCHHH-H
T ss_pred CCCEEEEEeeCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHhh-hccc-cc------cHHHHhhhcCeeeeecchHH-H
Confidence 578999999999999999999999999888777654 3455655 5643 22 22334567899998887642 2
Q ss_pred HH-----HHHHhccCCEEEEe
Q 018158 263 GP-----ILELLKVNGTLSVV 278 (360)
Q Consensus 263 ~~-----~~~~l~~~G~~v~~ 278 (360)
.. +...|+++..+.+.
T Consensus 86 ~~vy~~~I~p~lk~g~~L~Fa 106 (182)
T d1np3a2 86 GRLYKEEIEPNLKKGATLAFA 106 (182)
T ss_dssp HHHHHHHTGGGCCTTCEEEES
T ss_pred HHHHHHhhhhhcCCCcEEEEe
Confidence 33 44446666666544
|
| >d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: Caffeoyl-CoA O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=83.89 E-value=6.1 Score=30.87 Aligned_cols=96 Identities=16% Similarity=0.205 Sum_probs=63.1
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHH---cCCCe---EeeCccHHHHHhc------CCCc
Q 018158 184 AKKRIGIVGLGGLGHVAVKFGKAF--GHHVTVISTSPSKEKEAKEL---LGADE---FILSTNAMQMQAG------KRTL 249 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~aiqla~~~--G~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~------~~~~ 249 (360)
..++||=+|.+ +|..++.+|+.+ +.+|+.++.+++..+.+++. .|..+ ++.....+...+. ...|
T Consensus 59 ~~k~iLEiGT~-~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a~~~L~~l~~~~~~~~~f 137 (227)
T d1susa1 59 NAKNTMEIGVY-TGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 137 (227)
T ss_dssp TCCEEEEECCG-GGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCGGGTTCB
T ss_pred CCCcEEEecch-hhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHHHHHHHHHHhccccCCce
Confidence 66788888873 477777777765 46899999999877766654 35432 2233333333332 3579
Q ss_pred CEEE-EcCCCc--ccHHHHHHHhccCCEEEEeCC
Q 018158 250 DFIL-DTVSAK--HSLGPILELLKVNGTLSVVGA 280 (360)
Q Consensus 250 d~vi-d~~g~~--~~~~~~~~~l~~~G~~v~~g~ 280 (360)
|+|| |+--.. .-+..+++.+++||.++.=..
T Consensus 138 D~iFiDa~k~~y~~~~e~~~~ll~~gGiii~DNv 171 (227)
T d1susa1 138 DFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNT 171 (227)
T ss_dssp SEEEECSCSTTHHHHHHHHHHHBCTTCCEEEETT
T ss_pred eEEEeccchhhhHHHHHHHHhhcCCCcEEEEccC
Confidence 9997 443322 236789999999998876543
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=83.64 E-value=0.39 Score=39.32 Aligned_cols=60 Identities=15% Similarity=0.174 Sum_probs=37.4
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCCeEeeCccHHHHHhc--CCCcCEEEEcCCC
Q 018158 187 RIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGADEFILSTNAMQMQAG--KRTLDFILDTVSA 258 (360)
Q Consensus 187 ~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~--~~~~d~vid~~g~ 258 (360)
+|||+|+ |-+|..++..+...|. ++++++.... + ..|..+.+..... ..++|+||.+++.
T Consensus 2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~-------~----~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~ 64 (298)
T d1n2sa_ 2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE-------F----CGDFSNPKGVAETVRKLRPDVIVNAAAH 64 (298)
T ss_dssp EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS-------S----CCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc-------c----cCcCCCHHHHHHHHHHcCCCEEEEeccc
Confidence 5899999 9999999888877774 5555543211 1 1122233333222 3468999998873
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=83.45 E-value=2.6 Score=32.18 Aligned_cols=99 Identities=19% Similarity=0.127 Sum_probs=56.1
Q ss_pred CCCcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHc---CCCeE-ee--CccHHHH-Hhc-CCCcCEEEE
Q 018158 183 PAKKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELL---GADEF-IL--STNAMQM-QAG-KRTLDFILD 254 (360)
Q Consensus 183 ~~~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~-v~--~~~~~~~-~~~-~~~~d~vid 254 (360)
+++..++=.++|.=|+...-+-+.-+.+|++++++++.++.+++++ +.... ++ ..+.... ... ...+|.|+-
T Consensus 22 ~~~~~~lD~t~G~Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~~~~~~~~~vdgIl~ 101 (192)
T d1m6ya2 22 EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILM 101 (192)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHHHHHcCCCCcceeee
Confidence 3777654433355455443333334679999999999999998864 32222 22 1122111 111 367888753
Q ss_pred cCCCc---------------ccHHHHHHHhccCCEEEEeCCC
Q 018158 255 TVSAK---------------HSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 255 ~~g~~---------------~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
=.|.. ..+..+.+.++++|+++.+...
T Consensus 102 DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~f~ 143 (192)
T d1m6ya2 102 DLGVSTYQLKGENRELENLKEFLKKAEDLLNPGGRIVVISFH 143 (192)
T ss_dssp ECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEESS
T ss_pred ccchhHhhhhhhhccchhHHHHHHHHHHhcCCCCeeeeeccc
Confidence 34431 2356666777888888766443
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=83.30 E-value=4.4 Score=29.10 Aligned_cols=69 Identities=20% Similarity=0.249 Sum_probs=41.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHH-HHHHHHcC-C----CeEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKE-KEAKELLG-A----DEFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~-~~~~~~~g-~----~~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
+|.|+|+|.+|...+..+...+. ++..++.++++. ..+.. +- + ........ . ...-++.|+|+-+.|.
T Consensus 3 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~D-l~~~~~~~~~~~~~~~--~-~~~~~~adivvitag~ 78 (142)
T d1y6ja1 3 KVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMD-INHGLPFMGQMSLYAG--D-YSDVKDCDVIVVTAGA 78 (142)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHH-HTTSCCCTTCEEEC----C-GGGGTTCSEEEECCCC
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeee-eccCcccCCCeeEeeC--c-HHHhCCCceEEEeccc
Confidence 57788999999988888887775 699999877642 33333 22 1 11111111 1 1224679999999884
Q ss_pred c
Q 018158 259 K 259 (360)
Q Consensus 259 ~ 259 (360)
.
T Consensus 79 ~ 79 (142)
T d1y6ja1 79 N 79 (142)
T ss_dssp -
T ss_pred c
Confidence 3
|
| >d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=82.58 E-value=0.63 Score=37.61 Aligned_cols=34 Identities=18% Similarity=0.328 Sum_probs=29.5
Q ss_pred CcEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCh
Q 018158 185 KKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSP 218 (360)
Q Consensus 185 ~~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~~ 218 (360)
.-.++|+|+|+.|+.++..+..+|.+|.+++..+
T Consensus 42 ~yDvvVIGgG~aG~~aA~~~a~~G~kv~vve~~~ 75 (261)
T d1mo9a1 42 EYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWP 75 (261)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccC
Confidence 3458888999999999999999999999998754
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.50 E-value=0.92 Score=32.68 Aligned_cols=35 Identities=31% Similarity=0.432 Sum_probs=26.7
Q ss_pred CCcEEEEEcCChHHHHH-HHHH---HHcCCeEEEEeCCh
Q 018158 184 AKKRIGIVGLGGLGHVA-VKFG---KAFGHHVTVISTSP 218 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~a-iqla---~~~G~~V~~~~~~~ 218 (360)
++++++|+|+|.+|.-+ ..++ +..|.+|+.+.+++
T Consensus 36 ~~k~i~IvGgG~~G~E~A~~l~~~~~~~g~~Vt~i~~~~ 74 (137)
T d1m6ia2 36 EVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEK 74 (137)
T ss_dssp HCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence 67899999999999643 3333 46799999998754
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=81.88 E-value=0.73 Score=34.12 Aligned_cols=31 Identities=32% Similarity=0.270 Sum_probs=25.1
Q ss_pred cEEEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018158 186 KRIGIVGLGGLGHVAVKFGKAFGHHVTVISTS 217 (360)
Q Consensus 186 ~~vlI~Gag~vG~~aiqla~~~G~~V~~~~~~ 217 (360)
.+|+|+|+|.+|+-++..++. +.+|+++++.
T Consensus 1 ~rVvIIGgG~~G~e~A~~l~~-~~~Vtvv~~~ 31 (167)
T d1xhca1 1 SKVVIVGNGPGGFELAKQLSQ-TYEVTVIDKE 31 (167)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSS
T ss_pred CeEEEECCcHHHHHHHHHHHc-CCCEEEEecc
Confidence 378999999999987777654 6799999864
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=81.52 E-value=0.26 Score=37.11 Aligned_cols=95 Identities=23% Similarity=0.298 Sum_probs=53.1
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHc-CCeEE-EEeCChhHH-H-HHHHHcCCCeEeeCccHHHHHhcCCCcCEEEEcCCCcc
Q 018158 186 KRIGIVGL-GGLGHVAVKFGKAF-GHHVT-VISTSPSKE-K-EAKELLGADEFILSTNAMQMQAGKRTLDFILDTVSAKH 260 (360)
Q Consensus 186 ~~vlI~Ga-g~vG~~aiqla~~~-G~~V~-~~~~~~~~~-~-~~~~~~g~~~~v~~~~~~~~~~~~~~~d~vid~~g~~~ 260 (360)
=+|.|.|+ |-+|.++++++... ++++. ++++..... . .+.+..|.... ...-..........+|+++|.+.-.
T Consensus 5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~-~~~~~~~~~~~~~~~DViIDFs~p~- 82 (162)
T d1diha1 5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKT-GVTVQSSLDAVKDDFDVFIDFTRPE- 82 (162)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCC-SCCEESCSTTTTTSCSEEEECSCHH-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccC-CceeeccHHHHhcccceEEEeccHH-
Confidence 36889998 99999999988875 66754 444322110 0 00000110000 0000011122346789999998654
Q ss_pred cHHHHHHHhccCCEEEEeCCCC
Q 018158 261 SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 261 ~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.....++.....|.=+.+|...
T Consensus 83 ~~~~~~~~a~~~~~~~ViGTTG 104 (162)
T d1diha1 83 GTLNHLAFCRQHGKGMVIGTTG 104 (162)
T ss_dssp HHHHHHHHHHHTTCEEEECCCC
T ss_pred HHHHHHHHHHhccceeEEecCC
Confidence 4566667777777777787654
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=81.15 E-value=4.4 Score=30.16 Aligned_cols=74 Identities=23% Similarity=0.315 Sum_probs=44.0
Q ss_pred CCcEEEEEcCChHHHH---HHHHHHH--c-CCeEEEEeCChhHHHHH-------HHHcCCCeEeeCccHHHHHhcCCCcC
Q 018158 184 AKKRIGIVGLGGLGHV---AVKFGKA--F-GHHVTVISTSPSKEKEA-------KELLGADEFILSTNAMQMQAGKRTLD 250 (360)
Q Consensus 184 ~~~~vlI~Gag~vG~~---aiqla~~--~-G~~V~~~~~~~~~~~~~-------~~~~g~~~~v~~~~~~~~~~~~~~~d 250 (360)
|+-++.|+|+|.+|.. ...+++. + +.++..++.++++++.. ...++....+.... +..+.-.+.|
T Consensus 1 p~mKI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~t--d~~eaL~dad 78 (171)
T d1obba1 1 PSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTM--NLDDVIIDAD 78 (171)
T ss_dssp CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEES--CHHHHHTTCS
T ss_pred CCcEEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeC--ChhhcccCCC
Confidence 4567899999988853 2223332 2 34899999998876432 12144332222211 1222347899
Q ss_pred EEEEcCCCc
Q 018158 251 FILDTVSAK 259 (360)
Q Consensus 251 ~vid~~g~~ 259 (360)
+|+.+.+..
T Consensus 79 ~Vv~~~~~g 87 (171)
T d1obba1 79 FVINTAMVG 87 (171)
T ss_dssp EEEECCCTT
T ss_pred eEeeecccc
Confidence 999998765
|
| >d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=80.88 E-value=7.8 Score=31.91 Aligned_cols=50 Identities=14% Similarity=0.096 Sum_probs=36.4
Q ss_pred CCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC---ChhHHHHHHHHcCCCeEe
Q 018158 184 AKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVIST---SPSKEKEAKELLGADEFI 234 (360)
Q Consensus 184 ~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~---~~~~~~~~~~~~g~~~~v 234 (360)
++...+|..+ |..|++.+..++.+|.+.+++.. ++.+++.++. +|++-+.
T Consensus 63 ~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~-~Ga~vi~ 116 (320)
T d1z7wa1 63 PGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLA-FGVELVL 116 (320)
T ss_dssp TTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHH-TTCEEEE
T ss_pred CCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhc-cCcceEE
Confidence 5555555544 99999999999999998555553 4557777777 9986443
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=80.86 E-value=7.6 Score=27.64 Aligned_cols=68 Identities=21% Similarity=0.281 Sum_probs=41.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHH-HHH---cC--CCeEeeCccHHHHHhcCCCcCEEEEcCCC
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFGH--HVTVISTSPSKEKEA-KEL---LG--ADEFILSTNAMQMQAGKRTLDFILDTVSA 258 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G~--~V~~~~~~~~~~~~~-~~~---~g--~~~~v~~~~~~~~~~~~~~~d~vid~~g~ 258 (360)
++.|+|+|.+|...+..+...+. ++..++.++++..-. ... .. ....+...+. +.-++.|+|+-++|.
T Consensus 2 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~----~~~~~adivvitag~ 77 (140)
T d1a5za1 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY----ADLKGSDVVIVAAGV 77 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG----GGGTTCSEEEECCCC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH----HHhcCCCEEEEeccc
Confidence 47788999999988777776664 799999887653211 110 11 1111111111 124689999999885
|
| >d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Trypanosoma cruzi [TaxId: 5693]
Probab=80.82 E-value=5.4 Score=30.28 Aligned_cols=94 Identities=15% Similarity=0.239 Sum_probs=56.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcC-----CeEEE-EeC--ChhHHHHHHHHcCC-------C---------------eEee-
Q 018158 187 RIGIVGLGGLGHVAVKFGKAFG-----HHVTV-IST--SPSKEKEAKELLGA-------D---------------EFIL- 235 (360)
Q Consensus 187 ~vlI~Gag~vG~~aiqla~~~G-----~~V~~-~~~--~~~~~~~~~~~~g~-------~---------------~~v~- 235 (360)
+|.|-|-|-+|.++...+-..+ .+|.+ .+. +.+....+.+ +-. + .+++
T Consensus 4 kigINGFGRIGR~vlR~~~~~~~~~~~i~iv~Ind~~~~~~~~ayLlk-yDSvhG~~~~~v~~~~~~~~~~~~~~~i~~g 82 (190)
T d1k3ta1 4 KVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMR-YDTVHGKFKYEVTTTKSSPSVAKDDTLVVNG 82 (190)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCBTTTEEEEEEEESCCCHHHHHHHHH-EETTTEECSSCEEEECSSTTCSSCCEEEETT
T ss_pred EEEEECCChHHHHHHHHHHHcCCCCCCeEEEEEecCCCCHHHHHHHhh-ccccccCCCceEEEccCccccccccceEEcC
Confidence 5788899999999887664432 24444 333 4556666655 421 0 0111
Q ss_pred --------CccHHHHHhcCCCcCEEEEcCCCcccHHHHHHHhccCCEEEEeCCC
Q 018158 236 --------STNAMQMQAGKRTLDFILDTVSAKHSLGPILELLKVNGTLSVVGAP 281 (360)
Q Consensus 236 --------~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 281 (360)
.+++....-...++|+|+||+|.......+...+..|-+-|.+..+
T Consensus 83 ~~i~~~~~~~~p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP 136 (190)
T d1k3ta1 83 HRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAP 136 (190)
T ss_dssp EEEEEEECCSCGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred ceEEecccCCChhHCCHhhcCCcEEEEecccccccccchhhcccCcceeeeccC
Confidence 1111111001348999999999877778888888887655555443
|
| >d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermus thermophilus [TaxId: 274]
Probab=80.24 E-value=4.9 Score=30.25 Aligned_cols=98 Identities=20% Similarity=0.176 Sum_probs=57.2
Q ss_pred CCCCcEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHcCCC-eEee--CccHHHH-Hhc-CCCcCEEEEc
Q 018158 182 SPAKKRIGIVGL-GGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKELLGAD-EFIL--STNAMQM-QAG-KRTLDFILDT 255 (360)
Q Consensus 182 ~~~~~~vlI~Ga-g~vG~~aiqla~~~G~~V~~~~~~~~~~~~~~~~~g~~-~~v~--~~~~~~~-~~~-~~~~d~vid~ 255 (360)
.++|.. +|.+. |.=|+.. .+++. +.+|++++++++.+..+++..... ..+. ..+.... ... ..++|.|+==
T Consensus 16 ~~~g~~-~vD~T~G~GGhs~-~iL~~-~~~viaiD~D~~ai~~a~~~~~~~~~~~~~~f~~~~~~l~~~~~~~vdgIl~D 92 (182)
T d1wg8a2 16 VRPGGV-YVDATLGGAGHAR-GILER-GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAALGVERVDGILAD 92 (182)
T ss_dssp CCTTCE-EEETTCTTSHHHH-HHHHT-TCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTTCSCEEEEEEE
T ss_pred CCCCCE-EEEeCCCCcHHHH-HHhcc-cCcEEEEhhhhhHHHHHhhccccceeEeehHHHHHHHHHHHcCCCccCEEEEE
Confidence 347776 45555 6656644 33443 679999999999988888733221 1121 1111111 111 3568877633
Q ss_pred CCCcc---------------cHHHHHHHhccCCEEEEeCCCC
Q 018158 256 VSAKH---------------SLGPILELLKVNGTLSVVGAPE 282 (360)
Q Consensus 256 ~g~~~---------------~~~~~~~~l~~~G~~v~~g~~~ 282 (360)
.|... .+....+.++++|+++.+...+
T Consensus 93 LGvSs~qld~~~re~~~~~~~L~~~~~~lk~gg~~~ii~fhs 134 (182)
T d1wg8a2 93 LGVSSFHLDDPSDELNALKEFLEQAAEVLAPGGRLVVIAFHS 134 (182)
T ss_dssp CSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEEEEEEEEECSH
T ss_pred ccCCHHHhhcchHHHHHHHHHHHHHHhhhCCCCeEEEEeccc
Confidence 44321 3577788888888888776543
|