Citrus Sinensis ID: 018262
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 359 | ||||||
| 255543076 | 420 | conserved hypothetical protein [Ricinus | 0.997 | 0.852 | 0.821 | 1e-175 | |
| 224124260 | 420 | predicted protein [Populus trichocarpa] | 0.994 | 0.85 | 0.820 | 1e-173 | |
| 449453982 | 420 | PREDICTED: transmembrane protein 184B-li | 0.997 | 0.852 | 0.808 | 1e-171 | |
| 449490896 | 389 | PREDICTED: transmembrane protein 184B-li | 0.997 | 0.920 | 0.808 | 1e-170 | |
| 359494776 | 414 | PREDICTED: transmembrane protein 184A-li | 1.0 | 0.867 | 0.786 | 1e-167 | |
| 296080914 | 380 | unnamed protein product [Vitis vinifera] | 1.0 | 0.944 | 0.786 | 1e-167 | |
| 357511647 | 420 | Transmembrane protein 184A [Medicago tru | 0.997 | 0.852 | 0.778 | 1e-166 | |
| 356505717 | 421 | PREDICTED: transmembrane protein 184A-li | 1.0 | 0.852 | 0.783 | 1e-166 | |
| 356534951 | 418 | PREDICTED: transmembrane protein 184B-li | 0.997 | 0.856 | 0.770 | 1e-161 | |
| 356575269 | 418 | PREDICTED: transmembrane protein 184B-li | 0.997 | 0.856 | 0.773 | 1e-160 |
| >gi|255543076|ref|XP_002512601.1| conserved hypothetical protein [Ricinus communis] gi|223548562|gb|EEF50053.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 300/365 (82%), Positives = 328/365 (89%), Gaps = 7/365 (1%)
Query: 1 MSFLSLVFPERAIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGRVLKPSVCLM 60
MSFLSLV P AIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGR+LKPS CLM
Sbjct: 57 MSFLSLVLPASAIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGRILKPSCCLM 116
Query: 61 TCCLPPVPLDGRFIRRCKQGCVQFVILKPILVVATLILFANGKYKDGNFSPDQGYLYITI 120
TCCLPP+PLDGRFIRRCKQGC+QFVILKPILV TL+L+A GKYKDGNFSP+Q YLY+TI
Sbjct: 117 TCCLPPIPLDGRFIRRCKQGCLQFVILKPILVAVTLVLYAKGKYKDGNFSPNQAYLYLTI 176
Query: 121 IYTISYTMALYALVLFYMACRDLLHPFNPVPKFIMIKSVVFLTYWQGVLVFLAAKSGLIE 180
IYTISYTMALYAL LFY+ACRDLL PFNPVPKF++IKSVVFLTYWQGVLVFLAAKSG I+
Sbjct: 177 IYTISYTMALYALALFYVACRDLLQPFNPVPKFVIIKSVVFLTYWQGVLVFLAAKSGFIK 236
Query: 181 NTDEAAKFQDFILCIEMLIAAVGHLFAFPYKEYAGANIGGSRGLTGSLAHALKLNDFYHD 240
+ +EAA+FQ+FI+C+EMLIAAVGHLFAFPYKEYAGANIGGS GLTGSLAHALKLNDFYHD
Sbjct: 237 DAEEAAQFQNFIICVEMLIAAVGHLFAFPYKEYAGANIGGSYGLTGSLAHALKLNDFYHD 296
Query: 241 TVHQFAPTYHDYVLYNHNEGDEGTRKYRSRTFVPTGHEMDAVRR------NKLDEIQLSS 294
TVHQFAPTYHDYVLYNH+EGDEGTRKYRSRTFVPTG EMDA+RR NKLDEIQLSS
Sbjct: 297 TVHQFAPTYHDYVLYNHSEGDEGTRKYRSRTFVPTGQEMDAIRRNKHMFGNKLDEIQLSS 356
Query: 295 VSSSDASTPKHSSTMPDTAHSDAIKSSLLVDVSNSLSAPYDMALIDIDMSSYPAKVPAAK 354
SSS STPK+ + PD+ D +KSSLLVD SNS + PYDM+LID+D+SSYPA+VPAA
Sbjct: 357 HSSSGTSTPKNIVSAPDSVQRDTMKSSLLVDASNSFT-PYDMSLIDMDLSSYPAQVPAAN 415
Query: 355 ENETR 359
E R
Sbjct: 416 ETGIR 420
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224124260|ref|XP_002329979.1| predicted protein [Populus trichocarpa] gi|224124264|ref|XP_002329980.1| predicted protein [Populus trichocarpa] gi|118487141|gb|ABK95399.1| unknown [Populus trichocarpa] gi|222871404|gb|EEF08535.1| predicted protein [Populus trichocarpa] gi|222871405|gb|EEF08536.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|449453982|ref|XP_004144735.1| PREDICTED: transmembrane protein 184B-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449490896|ref|XP_004158742.1| PREDICTED: transmembrane protein 184B-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|359494776|ref|XP_002269971.2| PREDICTED: transmembrane protein 184A-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|296080914|emb|CBI18744.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|357511647|ref|XP_003626112.1| Transmembrane protein 184A [Medicago truncatula] gi|87240996|gb|ABD32854.1| Protein of unknown function [Medicago truncatula] gi|355501127|gb|AES82330.1| Transmembrane protein 184A [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356505717|ref|XP_003521636.1| PREDICTED: transmembrane protein 184A-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356534951|ref|XP_003536014.1| PREDICTED: transmembrane protein 184B-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356575269|ref|XP_003555764.1| PREDICTED: transmembrane protein 184B-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 359 | ||||||
| TAIR|locus:2146799 | 422 | AT5G26740 [Arabidopsis thalian | 1.0 | 0.850 | 0.696 | 1.3e-137 | |
| TAIR|locus:2074504 | 422 | AT3G05940 [Arabidopsis thalian | 0.980 | 0.834 | 0.694 | 3.7e-135 | |
| MGI|MGI:2445179 | 407 | Tmem184b "transmembrane protei | 0.805 | 0.710 | 0.370 | 4.1e-49 | |
| UNIPROTKB|A2VDL9 | 407 | TMEM184B "Transmembrane protei | 0.699 | 0.616 | 0.385 | 6e-48 | |
| UNIPROTKB|Q9Y519 | 407 | TMEM184B "Transmembrane protei | 0.699 | 0.616 | 0.385 | 7.7e-48 | |
| ZFIN|ZDB-GENE-050417-219 | 416 | zgc:112178 "zgc:112178" [Danio | 0.699 | 0.603 | 0.374 | 3.8e-46 | |
| WB|WBGene00009574 | 398 | F40E10.6 [Caenorhabditis elega | 0.601 | 0.542 | 0.441 | 1.2e-45 | |
| MGI|MGI:2385897 | 425 | Tmem184a "transmembrane protei | 0.688 | 0.581 | 0.361 | 3.4e-45 | |
| RGD|1306702 | 425 | Tmem184a "transmembrane protei | 0.688 | 0.581 | 0.365 | 4.4e-45 | |
| UNIPROTKB|Q6ZMB5 | 413 | TMEM184A "Transmembrane protei | 0.596 | 0.518 | 0.417 | 5e-44 |
| TAIR|locus:2146799 AT5G26740 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1347 (479.2 bits), Expect = 1.3e-137, P = 1.3e-137
Identities = 255/366 (69%), Positives = 294/366 (80%)
Query: 1 MSFLSLVFPERAIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGRVLKPSVCLM 60
MSFLSLV P+ +IYF+SIREVYEAWVIYNFLSLCLAWVGGPG+VVLSLSGR LKPS LM
Sbjct: 57 MSFLSLVLPKSSIYFDSIREVYEAWVIYNFLSLCLAWVGGPGSVVLSLSGRSLKPSWSLM 116
Query: 61 TCCLPPVPLDGRFIRRCKQGCVQFVILKPILVVATLILFANGKYKDGNFSPDQGXXXXXX 120
TCC PP+ LDGRFIRRCKQGC+QFVILKPILV TL+L+A GKYKDGNF+PDQ
Sbjct: 117 TCCFPPLTLDGRFIRRCKQGCLQFVILKPILVAVTLVLYAKGKYKDGNFNPDQAYLYLTI 176
Query: 121 XXXXXXXMALYALVLFYMACRDLLHPFNPVPKFIMIKSVVFLTYWQGVLVFLAAKSGLIE 180
+ALYALVLFYMACRDLL PFNPVPKF++IKSVVFLTYWQGVLVFLAAKSG I+
Sbjct: 177 IYTISYTVALYALVLFYMACRDLLQPFNPVPKFVIIKSVVFLTYWQGVLVFLAAKSGFIK 236
Query: 181 NTDEAAKFQDFILCIEMLIAAVGHLFAFPYKEYAGANIGGSRGLTGSLAHALKLNDFYHD 240
+ + AA FQ+FI+C+EMLIAA H +AFPYKEYAGAN+GGS +GSL+HA+KLNDFYHD
Sbjct: 237 SAEAAAHFQNFIICVEMLIAAACHFYAFPYKEYAGANVGGSGSFSGSLSHAVKLNDFYHD 296
Query: 241 TVHQFAPTYHDYVLYNHNEG-DEGTRKYRSRTFVPTGHEMDAVRRNK------LDEIQLS 293
TVHQFAPTYHDYVLYNH +G DEGT+KYRSRTFVPTG EMDA+R+NK +D + +S
Sbjct: 297 TVHQFAPTYHDYVLYNHQDGGDEGTKKYRSRTFVPTGQEMDAMRKNKPVYANKIDGVSVS 356
Query: 294 SVSSSDASTPKHSSTMPDTAHSDAIKXXXXXXXXXXXXAPYDMALIDIDMSSYPAKVPAA 353
S SS+AS+PK SS D A SDA+K YDM+LIDID+SS+P+ VP+A
Sbjct: 357 SSLSSEASSPKSSSVTSDPARSDAVKSSLLVDASDSLETMYDMSLIDIDLSSFPSNVPSA 416
Query: 354 KENETR 359
E+ R
Sbjct: 417 SESGPR 422
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| TAIR|locus:2074504 AT3G05940 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| MGI|MGI:2445179 Tmem184b "transmembrane protein 184b" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A2VDL9 TMEM184B "Transmembrane protein 184B" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9Y519 TMEM184B "Transmembrane protein 184B" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-050417-219 zgc:112178 "zgc:112178" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| WB|WBGene00009574 F40E10.6 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
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| MGI|MGI:2385897 Tmem184a "transmembrane protein 184a" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| RGD|1306702 Tmem184a "transmembrane protein 184A" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q6ZMB5 TMEM184A "Transmembrane protein 184A" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 359 | |||
| pfam03619 | 272 | pfam03619, Solute_trans_a, Organic solute transpor | 1e-94 |
| >gnl|CDD|217643 pfam03619, Solute_trans_a, Organic solute transporter Ostalpha | Back alignment and domain information |
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Score = 282 bits (725), Expect = 1e-94
Identities = 106/220 (48%), Positives = 148/220 (67%), Gaps = 8/220 (3%)
Query: 2 SFLSLVFPERAIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGR--VLKPSVCL 59
SFLSL+FP+ AIYF+ IR+ YEA+VIY F SL +A++GG ++ L G+ + P L
Sbjct: 53 SFLSLLFPKAAIYFDLIRDCYEAFVIYTFFSLLIAYLGGERNIIRLLEGKPPIRHPFPLL 112
Query: 60 MTCCLPPVPLDGRFIRRCKQGCVQFVILKPILVVATLILFANGKYKDGNFSPDQGYLYIT 119
C L D F RCK+G +Q+V++KP+ + +IL A G Y +G+FSPD GYLY+T
Sbjct: 113 TKCLLRTDRSDPTFFLRCKRGVLQYVVVKPLCAILAIILQAFGVYGEGSFSPDSGYLYLT 172
Query: 120 IIYTISYTMALYALVLFYMACRDLLHPFNPVPKFIMIKSVVFLTYWQGVLVFLAAKSGLI 179
IIY IS ++ALY LVLFY A +D L PF P+ KF+ IK ++F ++WQGVL+ + GLI
Sbjct: 173 IIYNISVSLALYCLVLFYKALKDELAPFKPLLKFLCIKLIIFFSFWQGVLISILVSLGLI 232
Query: 180 ENTDE------AAKFQDFILCIEMLIAAVGHLFAFPYKEY 213
+ T+ +A Q+F++CIEM I A+ HL+AFPYK Y
Sbjct: 233 KPTEAWEEPELSAGIQNFLICIEMFIFAIAHLYAFPYKPY 272
|
This family is a transmembrane organic solute transport protein. In vertebrates these proteins form a complex with Ostbeta, and function as bile transporters. In plants they may transport brassinosteroid-like compounds and act as regulators of cell death. Length = 272 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 359 | |||
| KOG2641 | 386 | consensus Predicted seven transmembrane receptor - | 100.0 | |
| PF03619 | 274 | Solute_trans_a: Organic solute transporter Ostalph | 100.0 |
| >KOG2641 consensus Predicted seven transmembrane receptor - rhodopsin family [Signal transduction mechanisms] | Back alignment and domain information |
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Probab=100.00 E-value=1.5e-65 Score=507.94 Aligned_cols=258 Identities=43% Similarity=0.824 Sum_probs=237.9
Q ss_pred eEEEEEccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHhHhhcCCCccCc-cccccccCCCCC-CChhHHHHhhc
Q 018262 2 SFLSLVFPERAIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGRVLKPS-VCLMTCCLPPVP-LDGRFIRRCKQ 79 (359)
Q Consensus 2 S~lsL~fPraaiy~d~iRd~YEAfvIY~Ff~LL~~ylGG~~~~v~~l~~~~~~~~-~~~~~CClp~~~-~~~~fLr~~K~ 79 (359)
||+|++.|+.++|+|++||||||||||+|++||++|+|||++++..+++++.+.+ .+|+|||+|++. ++++++|+||+
T Consensus 85 S~vsl~~p~~~~~~~~vr~~Yeaf~ly~F~sLl~~ylGGe~~~v~~l~~~~~~~~~~~P~cc~~~p~~~~~~~~lr~~K~ 164 (386)
T KOG2641|consen 85 SFVSLLVPRVAFYLDTVRECYEAFVLYVFLSLLFHYLGGEQNIVTELEGRLIRVNHTPPFCCFFPPTVRLTPKFLRRCKQ 164 (386)
T ss_pred HHHHHhccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHhccCCcccCCCCceeccCccccCCHHHHHHHHH
Confidence 7999999999999999999999999999999999999999999999999998844 455555555443 78999999999
Q ss_pred ceeehhhHHHHHHHHHHHHHhcCcccCCCcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcchhhHHHHH
Q 018262 80 GCVQFVILKPILVVATLILFANGKYKDGNFSPDQGYLYITIIYTISYTMALYALVLFYMACRDLLHPFNPVPKFIMIKSV 159 (359)
Q Consensus 80 gVLQyvivrPl~tii~iIl~~~G~Y~eg~~s~~~a~lyl~iI~niSv~lALY~L~lFy~~~k~~L~p~~P~~KFl~IKlV 159 (359)
||+||+|+||+++++++++++.|+|++|++++ |+|+++++|+|+++|+|||.+||+++|++|.||+|+.||+|+|+|
T Consensus 165 ~vlQ~~ivkp~~~lv~lvl~~~g~y~~g~~~~---~~~~~~i~n~S~~lalY~L~~fy~~~~~~L~py~p~~KF~~vk~i 241 (386)
T KOG2641|consen 165 GVLQYPIVKPFLALVTLVLYAFGVYDDGDFSV---YLYLTIIYNCSVSLALYSLVLFYTVTKDELSPYQPVVKFLCVKLI 241 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccCCccc---eehhHHHHHHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHHH
Confidence 99999999999999999999999999999987 899999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHcCCCCC------hhHHHHhhhhHHHHHHHHHHHHhhhcccccccccccCCC-------CCchHH
Q 018262 160 VFLTYWQGVLVFLAAKSGLIEN------TDEAAKFQDFILCIEMLIAAVGHLFAFPYKEYAGANIGG-------SRGLTG 226 (359)
Q Consensus 160 VFlsfwQ~vii~lL~~~GvI~~------~~~a~~iqn~LiCiEM~ifAilh~~AF~~k~Y~~~~~~~-------~~~~~~ 226 (359)
||+++||++++.+|++.|.++. +..++++||++||+||+++|++|+||||+++|....... ..+..+
T Consensus 242 vf~~~wQg~vi~~l~~~g~~~~~~~~~~~~~~~~iQnfiiciEM~i~ai~~~~af~~~~ya~~~~~~~~~~~~~~~~~~~ 321 (386)
T KOG2641|consen 242 VFLSFWQGIVLAILVKLGKIGPSYFDEVGTVAYGIQNFLICIEMLIAAIAHFYAFPAAPYALFDERSCDYRSVDMFSISS 321 (386)
T ss_pred HHHHHHHHHHHHHHHHhcccCcccchhHHHHHHHhhhhHHHHHHHHHHHHHHHhCCcchhccccccccccccccccccch
Confidence 9999999999999999999983 346899999999999999999999999999998876655 345678
Q ss_pred HHHhhcCcchHHHHHHhhcccCcceeeeeccCCCCC
Q 018262 227 SLAHALKLNDFYHDTVHQFAPTYHDYVLYNHNEGDE 262 (359)
Q Consensus 227 s~~~~~~~~D~~~D~~~~f~~~y~~y~~~~~~~~~~ 262 (359)
.++|+++++|...|..|+|+++|++|..+++.++..
T Consensus 322 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 357 (386)
T KOG2641|consen 322 SLWDSLMPNDLCSDAIRNFSPTYQDYTPQSDQDALS 357 (386)
T ss_pred HHHHhhcccCcccccccCCCcccccccccccCcccc
Confidence 999999999999999999999999999998665543
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| >PF03619 Solute_trans_a: Organic solute transporter Ostalpha; InterPro: IPR005178 This is a family of mainly hypothetical proteins of no known function | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00