Citrus Sinensis ID: 018323
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 358 | 2.2.26 [Sep-21-2011] | |||||||
| Q8L3X9 | 461 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.966 | 0.750 | 0.815 | 1e-162 | |
| O94297 | 426 | Putative 3-oxoacyl-[acyl- | yes | no | 0.972 | 0.816 | 0.514 | 1e-100 | |
| P56902 | 421 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.960 | 0.817 | 0.557 | 1e-98 | |
| Q9NWU1 | 459 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.952 | 0.742 | 0.530 | 1e-95 | |
| Q9D404 | 459 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.949 | 0.740 | 0.531 | 2e-95 | |
| O34340 | 413 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.960 | 0.832 | 0.497 | 1e-90 | |
| Q83E37 | 414 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.969 | 0.838 | 0.487 | 1e-89 | |
| Q9KQH9 | 414 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.949 | 0.821 | 0.492 | 1e-88 | |
| Q0VCA7 | 460 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.949 | 0.739 | 0.528 | 2e-88 | |
| P55338 | 415 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.944 | 0.814 | 0.497 | 3e-87 |
| >sp|Q8L3X9|KASM_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Arabidopsis thaliana GN=KAS PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 572 bits (1475), Expect = e-162, Method: Compositional matrix adjust.
Identities = 282/346 (81%), Positives = 318/346 (91%)
Query: 9 KSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRL 68
K++A FI YA+CAADEAL DA+WLP+++ +KERTGVSIGGGIGSI D V+AAQ+ICEKRL
Sbjct: 113 KAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRL 172
Query: 69 RRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMV 128
RRLSPFFIP+IL+NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDA RMIQFGD+DVMV
Sbjct: 173 RRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMV 232
Query: 129 AGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEH 188
AGGTESSIDALS+AGF +SRAL+TK+N +PQEASRPFDC RDGFVIGEGSGV+VLEE EH
Sbjct: 233 AGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDGFVIGEGSGVIVLEEYEH 292
Query: 189 AKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 248
AK+RGAKIYAE+ GYGMSGDAHHITQP DGKGA+LAMTRAL+QSGL +Q+DYVNAHAT
Sbjct: 293 AKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHAT 352
Query: 249 STPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAP 308
STP+GD VEA AI+TVFS+HATSG+LAFSSTKGA GHLLGAAGAVEAIF++LAIHHGVAP
Sbjct: 353 STPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAP 412
Query: 309 LTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLF 354
+TLN+ PDPIF+ FMPLT SK M + A+SNSFGFGGTNASLLF
Sbjct: 413 MTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLF 458
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Catalyzes all the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Able to elongate saturated acyl chains from 4 to at least 16 carbons. Uses malonyl-CoA but not acetyl-CoA as primer substrate. When expressed in a heterologous system, reveals a bimodal distribution of products, with peaks at C8 and C14-C16. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 4EC: 1 |
| >sp|O94297|OXSM_SCHPO Putative 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC887.13c PE=3 SV=1 | Back alignment and function description |
|---|
Score = 365 bits (936), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/352 (51%), Positives = 246/352 (69%), Gaps = 4/352 (1%)
Query: 8 LKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKR 67
L+ +A F AL +A EAL DA+W+ D+ +K TGV G GIG++ D ++ ++ +
Sbjct: 73 LREVATFTQLALTSAAEALKDARWIDIDEQEKLATGVCFGTGIGNLDDALNENGVLNKAG 132
Query: 68 LRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVM 127
+R++SP I +ILINM +G++S +YGF NH TACA G H+IGDA I+ G +DV+
Sbjct: 133 IRKVSPRVISKILINMPAGYISQRYGFTALNHTTTTACAAGCHAIGDAFNFIKLGHADVI 192
Query: 128 VAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELE 187
+AGG+ES I+ L++AGF K+R+L+TK+N P+ ASRPFD RDGFVIGEGS LVLEELE
Sbjct: 193 IAGGSESCINPLTVAGFSKARSLSTKFNDNPKAASRPFDANRDGFVIGEGSAALVLEELE 252
Query: 188 HAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHA 247
HAK R A IYAE+ GYG++ D++HIT P+ +G A AM R+LKQ+GL + Q+DY+NAHA
Sbjct: 253 HAKNRNAHIYAEIVGYGLASDSYHITAPNPNGDAAYYAMKRSLKQAGLSASQLDYINAHA 312
Query: 248 TSTPLGDTVEATAIRTVFSD-HATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 306
TST LGD E+ AI + D + + SS+KG+IGHLLGAAGA+E+++ VL + GV
Sbjct: 313 TSTKLGDVAESIAITRLLCDVNRNPEAFPVSSSKGSIGHLLGAAGAIESVYTVLTVQKGV 372
Query: 307 APLTLNLAKPD--PIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
P TLN D F +++P +K+ I+ ALSNSFGFGGTNASL F K
Sbjct: 373 LPPTLNFEYSDIPQQFQCDYVP-NVAKESRINVALSNSFGFGGTNASLCFKK 423
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May play a role in the biosynthesis of lipoic acid as well as longer chain fatty acids required for optimal mitochondrial function. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|P56902|FABF_RHIME 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Rhizobium meliloti (strain 1021) GN=fabF PE=3 SV=2 | Back alignment and function description |
|---|
Score = 360 bits (923), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 194/348 (55%), Positives = 250/348 (71%), Gaps = 4/348 (1%)
Query: 9 KSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRL 68
+ + FI YA+ AAD AL DA W P + TGV IG GIG + VDA + +K
Sbjct: 74 RKVDPFIVYAMAAADMALADAGWKPESDEDQISTGVLIGSGIGGLEGIVDAGYTLRDKGP 133
Query: 69 RRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMV 128
RR+SPFFIP LIN+A+G VS+++ +GPNH+ VTAC+TGAH+IGDA+R+I GD+DVMV
Sbjct: 134 RRISPFFIPGRLINLAAGQVSIRHKLRGPNHSVVTACSTGAHAIGDASRLIALGDADVMV 193
Query: 129 AGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEH 188
AGGTES I +S+AGF +AL+T++N P++ASRP+D RDGFV+GEG+G++VLEELEH
Sbjct: 194 AGGTESPICRISLAGFAACKALSTQHNDNPEKASRPYDADRDGFVMGEGAGIVVLEELEH 253
Query: 189 AKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 248
A+ RGAKIYAEV GYG+SGDA HIT P DG+GA M ALK++G+ + +DY+NAH T
Sbjct: 254 ARARGAKIYAEVIGYGLSGDAFHITAPSEDGEGAYRCMQMALKRAGVTAADIDYINAHGT 313
Query: 249 STPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAP 308
ST + DT+E A+ + D A+ ++ SSTK AIGHLLGAAGAVEAIF+ LAI +AP
Sbjct: 314 ST-MADTIELGAVERLVGDSAS--RISMSSTKSAIGHLLGAAGAVEAIFSALAIRDNIAP 370
Query: 309 LTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
TLNL P + +P A K I+ ALSNSFGFGGTNASL+ +
Sbjct: 371 PTLNLDNPSVETKIDLVPHVARK-REINVALSNSFGFGGTNASLILRR 417
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Rhizobium meliloti (strain 1021) (taxid: 266834) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|Q9NWU1|OXSM_HUMAN 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Homo sapiens GN=OXSM PE=1 SV=1 | Back alignment and function description |
|---|
Score = 350 bits (898), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 184/347 (53%), Positives = 240/347 (69%), Gaps = 6/347 (1%)
Query: 8 LKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKR 67
+KS++ A+ AA+ A+ D+ W P + + TGV+IG G+ + + A K
Sbjct: 112 IKSMSSPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKG 171
Query: 68 LRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVM 127
++SPFF+P+IL+NMA+G VS++Y +GPNHA TAC TGAH++GD+ R I GD+DVM
Sbjct: 172 YNKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVM 231
Query: 128 VAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELE 187
VAGGT+S I LS+AGF ++RAL+T N P+ A RPF RDGFV+GEG+ VLVLEE E
Sbjct: 232 VAGGTDSCISPLSLAGFSRARALST--NSDPKLACRPFHPKRDGFVMGEGAAVLVLEEYE 289
Query: 188 HAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHA 247
HA +R A+IYAEV GYG+SGDA HIT P +G+GA+ M ALK +G+Q ++ Y+NAHA
Sbjct: 290 HAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHA 349
Query: 248 TSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVA 307
TSTPLGD E AI+ +F DHA +LA SSTKGA GHLLGAAGAVEA F LA ++
Sbjct: 350 TSTPLGDAAENKAIKHLFKDHAY--ALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKL 407
Query: 308 PLTLNLAKPDPIFNDNFMPLTAS--KDMPISAALSNSFGFGGTNASL 352
P TLNL +P F+ N++PL A K L+NSFGFGGTNA+L
Sbjct: 408 PPTLNLDCSEPEFDLNYVPLKAQEWKTEKRFIGLTNSFGFGGTNATL 454
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May play a role in the biosynthesis of lipoic acid as well as longer chain fatty acids required for optimal mitochondrial function. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q9D404|OXSM_MOUSE 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Mus musculus GN=Oxsm PE=2 SV=1 | Back alignment and function description |
|---|
Score = 349 bits (895), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 184/346 (53%), Positives = 240/346 (69%), Gaps = 6/346 (1%)
Query: 9 KSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRL 68
KS++ A+ AA+ AL D+ W P + + TGV+IG G+ + + A + K
Sbjct: 113 KSMSSSTIMAVGAAELALKDSGWHPKREADQVATGVAIGMGMVPLEVISETALLFQTKGY 172
Query: 69 RRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMV 128
++SPFF+P+ILINMA+G VS++Y +GPNH+ TAC TGAH++GD+ R I GD+DVMV
Sbjct: 173 NKVSPFFVPKILINMAAGQVSIRYKLKGPNHSVSTACTTGAHAVGDSFRFIAHGDADVMV 232
Query: 129 AGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEH 188
AGGT+S I LS+AGF ++RAL++ N P+ A RPF RDGFV+GEG+ VLVLEE EH
Sbjct: 233 AGGTDSCISPLSLAGFSRARALSS--NPDPKLACRPFHPERDGFVMGEGAAVLVLEEHEH 290
Query: 189 AKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 248
A +RGA+IYAE+ GYG+SGDA HIT P +G+GA+ M A+K +G+ Q+ YVNAHAT
Sbjct: 291 AVQRGARIYAEILGYGLSGDAGHITAPDPEGEGALRCMAAAVKDAGVSPEQISYVNAHAT 350
Query: 249 STPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAP 308
STPLGD E AI+ +F DHA +LA SSTKGA GHLLGAAGAVEA F LA +H P
Sbjct: 351 STPLGDAAENRAIKRLFRDHAC--ALAISSTKGATGHLLGAAGAVEATFTALACYHQKLP 408
Query: 309 LTLNLAKPDPIFNDNFMPLTAS--KDMPISAALSNSFGFGGTNASL 352
TLNL +P F+ N++PL + K L+NSFGFGGTNA+L
Sbjct: 409 PTLNLDCTEPEFDLNYVPLESQEWKAEGRCIGLTNSFGFGGTNATL 454
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May play a role in the biosynthesis of lipoic acid as well as longer chain fatty acids required for optimal mitochondrial function. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|O34340|FABF_BACSU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis (strain 168) GN=fabF PE=3 SV=1 | Back alignment and function description |
|---|
Score = 333 bits (855), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 174/350 (49%), Positives = 234/350 (66%), Gaps = 6/350 (1%)
Query: 9 KSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRL 68
+ + RF YA+ AA A+ DA +D+ R GV +G GIG + ++ K
Sbjct: 69 RKMDRFTQYAVVAAKMAVEDADLNITDE-IAPRVGVWVGSGIGGLETLESQFEIFLTKGP 127
Query: 69 RRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMV 128
RR+SPFF+P ++ +MA+G +S+ G +G N VTACATG +SIGDA ++IQ GD+DVMV
Sbjct: 128 RRVSPFFVPMMIPDMATGQISIALGAKGVNSCTVTACATGTNSIGDAFKVIQRGDADVMV 187
Query: 129 AGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEH 188
GGTE+ + +S AGF ++AL+T N P+ ASRPFD RDGFV+GEG+G++VLEELEH
Sbjct: 188 TGGTEAPLTRMSFAGFSANKALST--NPDPKTASRPFDKNRDGFVMGEGAGIIVLEELEH 245
Query: 189 AKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 248
A RGAKIY E+ GYG +GDA+HIT P DG+G AM A+K +G+ ++DY+NAH T
Sbjct: 246 ALARGAKIYGEIVGYGSTGDAYHITAPAQDGEGGARAMQEAIKDAGIAPEEIDYINAHGT 305
Query: 249 STPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAP 308
ST D E AI+TVF +HA LA SSTK GHLLGAAG +EAIF++LAI GV P
Sbjct: 306 STYYNDKYETMAIKTVFGEHAH--KLAVSSTKSMTGHLLGAAGGIEAIFSILAIKEGVIP 363
Query: 309 LTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358
T+N+ PD + +++P A + ++ LSNS GFGG NA+L+F K Q
Sbjct: 364 PTINIQTPDEECDLDYVPDEARR-QELNYVLSNSLGFGGHNATLIFKKYQ 412
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Bacillus subtilis (strain 168) (taxid: 224308) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|Q83E37|FABF_COXBU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN=fabF PE=1 SV=1 | Back alignment and function description |
|---|
Score = 330 bits (846), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/355 (48%), Positives = 236/355 (66%), Gaps = 8/355 (2%)
Query: 6 LILKSIAR---FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQM 62
L LKSI + F+ +A+ +A +A D+ L ++ R GV+IG GIG +
Sbjct: 63 LDLKSIRKTDVFVQFAMESARQAWEDSG-LEINETNAPRVGVAIGSGIGGMPWIEKNYDA 121
Query: 63 ICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFG 122
+ R++SPFFIP +INMASG VS+KY +GPN + VTAC TG H+IG AARMI
Sbjct: 122 LLTSGPRKISPFFIPGAIINMASGMVSIKYDLKGPNISIVTACTTGLHNIGHAARMIAHN 181
Query: 123 DSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLV 182
D+D M+AGGTE + L + GF RAL+T+ N P++ASRP+D GRDGFV+GEG+ +V
Sbjct: 182 DADAMIAGGTEMASTPLGIGGFAAVRALSTR-NDEPEKASRPWDKGRDGFVLGEGAACVV 240
Query: 183 LEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDY 242
+EELEHAKKR A IYAE+ G+GMSGDA+H+T+P + +G M +L+ +G+ +VDY
Sbjct: 241 VEELEHAKKRNATIYAEIIGFGMSGDAYHMTRPDPEAEGFTTCMKNSLRDAGIAPERVDY 300
Query: 243 VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAI 302
+NAH TSTP D +EA AI+ F DHA LA SSTK GH+LGAAGA+E + +VLAI
Sbjct: 301 INAHGTSTPAADPLEARAIKKTFGDHAY--KLAVSSTKSMTGHMLGAAGALETVISVLAI 358
Query: 303 HHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357
AP T+NL PD + +F+P +++M I +SNSFGFGGTN +L+ ++
Sbjct: 359 RDNTAPPTINLENPDEGCDLDFVP-NEAREMKIDTVMSNSFGFGGTNGTLVLSRV 412
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Coxiella burnetii (strain RSA 493 / Nine Mile phase I) (taxid: 227377) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|Q9KQH9|FABF_VIBCH 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=fabF PE=3 SV=3 | Back alignment and function description |
|---|
Score = 327 bits (837), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/343 (49%), Positives = 225/343 (65%), Gaps = 3/343 (0%)
Query: 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSP 73
FI Y + A +AL D+ L ++ R GV+IG GIG + Q + EK R++SP
Sbjct: 74 FIQYGIAAGIQALEDSG-LEVNEENAARIGVAIGSGIGGLELIETGHQALIEKGPRKVSP 132
Query: 74 FFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTE 133
FF+P ++NM +G++S+ G +GPN A TAC TG H+IG AARMI +GD+D MVAGG E
Sbjct: 133 FFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAE 192
Query: 134 SSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRG 193
+ L MAGF ++AL+T+ N PQ+ASRP+D RDGFV+G+G+G++VLEE EHAK RG
Sbjct: 193 KASTPLGMAGFGAAKALSTR-NDEPQKASRPWDKDRDGFVLGDGAGIMVLEEYEHAKARG 251
Query: 194 AKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG 253
AKIYAEV G+GMSGDA+H+T P DG G LAM A++ +G+ Q+ YVNAH TSTP G
Sbjct: 252 AKIYAEVVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAG 311
Query: 254 DTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNL 313
D E I+ + T L SSTK GHLLGAAG+VEAI V+++ + P T+NL
Sbjct: 312 DVAEVKGIKRALGEAGTKQVL-VSSTKSMTGHLLGAAGSVEAIITVMSLVDQMVPPTINL 370
Query: 314 AKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
P+ + +P A K + A+ NSFGFGGTN SL+F +
Sbjct: 371 DNPEEGLGVDLVPHVARKVESMEYAMCNSFGFGGTNGSLIFKR 413
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|Q0VCA7|OXSM_BOVIN 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Bos taurus GN=OXSM PE=2 SV=1 | Back alignment and function description |
|---|
Score = 326 bits (835), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 183/346 (52%), Positives = 235/346 (67%), Gaps = 6/346 (1%)
Query: 9 KSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRL 68
KS++ A+ AA+ AL DA W P + + TGV+IG G+ + + A K
Sbjct: 114 KSMSPPTVMAIAAAELALKDAGWHPQSEADQAATGVAIGMGMVPLEVISETALTFQTKGY 173
Query: 69 RRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMV 128
++SPFF+P+IL+NMASG VS+++ +GPNHA TAC TGAH++GD+ R + GD+DVMV
Sbjct: 174 SKVSPFFVPKILVNMASGQVSIRHKLKGPNHAVSTACTTGAHAVGDSFRFVAHGDADVMV 233
Query: 129 AGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEH 188
AGGT+S I LS+AGF ++RAL+T N P+ A RPF RDGFV+GEG+ VLVLEE H
Sbjct: 234 AGGTDSCISPLSLAGFARARALST--NTDPKSACRPFHPQRDGFVMGEGAAVLVLEEHRH 291
Query: 189 AKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 248
A +RGA++YAE+ GYG+SGDA HIT P G+GA M A+K +G+Q +V Y+NAHAT
Sbjct: 292 ALRRGARVYAEIVGYGLSGDAGHITAPDPGGEGAFRCMAAAVKDAGIQPEEVSYINAHAT 351
Query: 249 STPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAP 308
STPLGD E AI+ +F DHA LA SSTKGA GHLLG AGA EA F LA +H P
Sbjct: 352 STPLGDAAENKAIKQLFKDHAH--VLAVSSTKGATGHLLGTAGAAEAAFTALACYHRKLP 409
Query: 309 LTLNLAKPDPIFNDNFMPLTAS--KDMPISAALSNSFGFGGTNASL 352
TLNL +P F+ N++PL A K AL+NSFGFGGTNA+L
Sbjct: 410 PTLNLDCTEPHFDLNYVPLKAQEWKAENRRIALTNSFGFGGTNATL 455
|
May play a role in the biosynthesis of lipoic acid as well as longer chain fatty acids required for optimal mitochondrial function. Bos taurus (taxid: 9913) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|P55338|FABF_VIBHA 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio harveyi GN=fabF PE=3 SV=2 | Back alignment and function description |
|---|
Score = 322 bits (824), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 171/344 (49%), Positives = 230/344 (66%), Gaps = 6/344 (1%)
Query: 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQ-MICEKRLRRLS 72
FI Y + A +AL D+ L + R GV+IG GIG + D ++A + EK R++S
Sbjct: 74 FIQYGIAAGIQALDDSG-LEITEENAARVGVAIGSGIGGL-DLIEAGHSALVEKGPRKVS 131
Query: 73 PFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGT 132
PFF+P ++NM +G++S+ G +GPN A TAC TG H+IG AARMI +GD++ MVAGG
Sbjct: 132 PFFVPSTIVNMVAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIAYGDAEAMVAGGA 191
Query: 133 ESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKR 192
E + L MAGF ++AL+T+ N PQ+ASRP+D GRDGFV+G+G+GV+VLEE EHAK R
Sbjct: 192 EKASTPLGMAGFGAAKALSTR-NDEPQKASRPWDKGRDGFVLGDGAGVMVLEEYEHAKAR 250
Query: 193 GAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 252
GAKIYAE+ G+GMSGDA+H+T P DG G LAM A++ + + QV YVNAH TSTP
Sbjct: 251 GAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDANITGTQVGYVNAHGTSTPA 310
Query: 253 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLN 312
GD E ++ + + L SSTK GHLLGAAG+VEAI VL++ + P T+N
Sbjct: 311 GDVAEIKGVKRALGEEGSKQVL-VSSTKSMTGHLLGAAGSVEAIITVLSLVDQIVPPTIN 369
Query: 313 LAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
L P+ + + +P TA K + + A+ NSFGFGGTN SL+F K
Sbjct: 370 LDDPEEGLDIDLVPHTARK-VDMEYAICNSFGFGGTNGSLVFKK 412
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Vibrio harveyi (taxid: 669) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 358 | ||||||
| TAIR|locus:2058359 | 461 | AT2G04540 [Arabidopsis thalian | 0.966 | 0.750 | 0.719 | 7.9e-133 | |
| ASPGD|ASPL0000064843 | 430 | AN7489 [Emericella nidulans (t | 0.941 | 0.783 | 0.490 | 3.9e-83 | |
| UNIPROTKB|E1BYY7 | 461 | OXSM "3-oxoacyl-[acyl-carrier- | 0.963 | 0.748 | 0.469 | 3.2e-81 | |
| TIGR_CMR|SPO_2271 | 421 | SPO_2271 "3-oxoacyl-(acyl carr | 0.960 | 0.817 | 0.482 | 1.4e-80 | |
| UNIPROTKB|Q0C090 | 428 | fabF "3-oxoacyl-[acyl-carrier- | 0.963 | 0.806 | 0.482 | 4.7e-80 | |
| UNIPROTKB|E2R866 | 460 | OXSM "3-oxoacyl-[acyl-carrier- | 0.952 | 0.741 | 0.466 | 7.3e-75 | |
| POMBASE|SPBC887.13c | 426 | SPBC887.13c "3-oxoacyl-[acyl-c | 0.972 | 0.816 | 0.440 | 4e-74 | |
| UNIPROTKB|F1MXW5 | 460 | OXSM "3-oxoacyl-[acyl-carrier- | 0.949 | 0.739 | 0.462 | 6.5e-74 | |
| UNIPROTKB|Q0VCA7 | 460 | OXSM "3-oxoacyl-[acyl-carrier- | 0.949 | 0.739 | 0.462 | 6.5e-74 | |
| TIGR_CMR|ECH_0882 | 422 | ECH_0882 "3-oxoacyl-(acyl-carr | 0.960 | 0.815 | 0.447 | 1.4e-73 |
| TAIR|locus:2058359 AT2G04540 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1302 (463.4 bits), Expect = 7.9e-133, P = 7.9e-133
Identities = 249/346 (71%), Positives = 284/346 (82%)
Query: 9 KSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXXXXDTVDAAQMICEKRL 68
K++A FI YA+CAADEAL DA+WLP+++ +KERTGV D V+AAQ+ICEKRL
Sbjct: 113 KAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRL 172
Query: 69 RRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMV 128
RRLSPFFIP+IL+NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDA RMIQFGD+DVMV
Sbjct: 173 RRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMV 232
Query: 129 AGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXXH 188
AGGTESSIDALS+AGF +SRAL+TK+N +PQEASRPFDC RDGF H
Sbjct: 233 AGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDGFVIGEGSGVIVLEEYEH 292
Query: 189 AKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 248
AK+RGAKIYAE+ GYGMSGDAHHITQP DGKGA+LAMTRAL+QSGL +Q+DYVNAHAT
Sbjct: 293 AKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHAT 352
Query: 249 STPLGDTVEATAIRTVFSDHATSGSLAFSSTKXXXXXXXXXXXXVEAIFAVLAIHHGVAP 308
STP+GD VEA AI+TVFS+HATSG+LAFSSTK VEAIF++LAIHHGVAP
Sbjct: 353 STPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAP 412
Query: 309 LTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLF 354
+TLN+ PDPIF+ FMPLT SK M + A+SNSFGFGGTNASLLF
Sbjct: 413 MTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLF 458
|
|
| ASPGD|ASPL0000064843 AN7489 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 833 (298.3 bits), Expect = 3.9e-83, P = 3.9e-83
Identities = 172/351 (49%), Positives = 223/351 (63%)
Query: 9 KSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXXXXDTVDAAQMICEKRL 68
+ +ARF YA+ AA+EAL DA+W P + Q E TGV + DA K
Sbjct: 88 RKMARFAQYAMAAAEEALEDAEWKPKAEDQLEATGVCLGSGIGNFDEIYDAVVAYDTKGY 147
Query: 69 RRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMV 128
++LSP F+P++LIN+ +GH+SMKYGF GPNH+A TAC TGAHSIGDAAR I GD+DVM+
Sbjct: 148 KKLSPLFVPKLLINLGAGHISMKYGFMGPNHSATTACTTGAHSIGDAARFIACGDADVML 207
Query: 129 AGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXXH 188
AGG ES I L++ GF ++R+L T YN P+++SRPFD RDGF H
Sbjct: 208 AGGAESCIHPLAIGGFARARSLATAYNDRPEKSSRPFDADRDGFVVGEE----------H 257
Query: 189 AKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 248
AK RGA+IYAEV+GYG SGDAHH+T P +G GA+LAM +ALK + L+ VDY+NAHAT
Sbjct: 258 AKARGARIYAEVKGYGCSGDAHHMTAPKANGGGALLAMKKALKNACLEPSAVDYINAHAT 317
Query: 249 STPLGDTVEATAIRTVF---SDHATSGSLAFSSTKXXXXXXXXXXXXVEAIFAVLAIHHG 305
ST +GD E AI+ + + + SSTK VEA+F VLAIH
Sbjct: 318 STVIGDAAENAAIKALLLGPGGKQKAADVNVSSTKGAIGHLLGGAGAVEALFTVLAIHEN 377
Query: 306 VAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
V P T+NL + + F+ N+ P A ++ I AL+NSFGFGGTN+SL F+K
Sbjct: 378 VMPPTINLDRLNDGFDFNYAPNEA-QERRIDLALTNSFGFGGTNSSLCFSK 427
|
|
| UNIPROTKB|E1BYY7 OXSM "3-oxoacyl-[acyl-carrier-protein] synthase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 164/349 (46%), Positives = 220/349 (63%)
Query: 8 LKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXXXXDTVDAAQMICEKR 67
+KS++ A+ AA+ A+ D+ W P + R GV + D A + K
Sbjct: 112 IKSMSSATVMAIGAAELAMKDSGWSPQSEEDHLRAGVAIGMGMVPLEEISDTASLFKTKG 171
Query: 68 LRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVM 127
++SPFF+P+IL+NMA+GH+S+KY +GPNHA TAC TGAH+IGD+ R I GD+DVM
Sbjct: 172 YSKVSPFFVPKILVNMAAGHISIKYQLKGPNHAVSTACTTGAHAIGDSFRFIALGDADVM 231
Query: 128 VAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXX 187
+AGGTE+ I LS+AGF ++RAL+T +N +P++A RPFD R+GF
Sbjct: 232 LAGGTEACISPLSLAGFARARALSTGFNASPKKACRPFDSQREGFVMGEGAAVLVLEEYR 291
Query: 188 HAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHA 247
HA +RGA+IYAEV GYG+SGDA HIT P+ +G GA M+ A+K SG++ V YVNAHA
Sbjct: 292 HAVQRGARIYAEVLGYGLSGDACHITAPNPEGDGAFRCMSAAIKDSGIKPEDVTYVNAHA 351
Query: 248 TSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKXXXXXXXXXXXXVEAIFAVLAIHHGVA 307
TSTPLGD E AI+ +F H S ++A SSTK +EA F L+ +H +
Sbjct: 352 TSTPLGDAAENQAIKKLFKSH--SHNIAVSSTKGATGHLLGAAGAIEAAFTALSCYHAIL 409
Query: 308 PLTLNLAKPDPIFNDNFMPLTAS--KDMPISAALSNSFGFGGTNASLLF 354
P TLNL K +P F+ N++PLTA K AL+NSFGFGGTNA+L F
Sbjct: 410 PPTLNLEKTEPEFDLNYVPLTAQEWKTEKRRVALTNSFGFGGTNATLCF 458
|
|
| TIGR_CMR|SPO_2271 SPO_2271 "3-oxoacyl-(acyl carrier protein) synthase II" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 809 (289.8 bits), Expect = 1.4e-80, P = 1.4e-80
Identities = 168/348 (48%), Positives = 219/348 (62%)
Query: 9 KSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXXXXDTVDAAQMICEKRL 68
+ I FI Y++ AA+ A DA WLP D+ + RTGV + A +I EK
Sbjct: 76 RKIEDFILYSIAAAEMACKDANWLPEDEEDRLRTGVLIGSGIGGLGSIAETANLIKEKGP 135
Query: 69 RRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMV 128
RR+SPFFIP LIN+ASG VS+++GF+GPNH+ VTAC+TGAH+IGDA+R+I+ GD+DVM+
Sbjct: 136 RRVSPFFIPGALINLASGQVSIRHGFKGPNHSVVTACSTGAHAIGDASRIIRAGDADVMI 195
Query: 129 AGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXXH 188
AGG E+ I + +AGF +AL+TKY P+ ASRP+D RDGF H
Sbjct: 196 AGGGEACICEIGIAGFNACKALSTKYADNPKAASRPYDADRDGFVMGEGAGIVVLEDYEH 255
Query: 189 AKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 248
AK RGAKIYAEV GYGMSGDA+HIT P G GA +M AL+ +GL+ +DY+NAH T
Sbjct: 256 AKARGAKIYAEVLGYGMSGDAYHITAPSETGDGAERSMRAALRSAGLEPSDLDYINAHGT 315
Query: 249 STPLGDTVEATAIRTVFSDHATSGSLAFSSTKXXXXXXXXXXXXVEAIFAVLAIHHGVAP 308
ST + DT+E A+ + +HA + + SSTK +EAIF++LAI VAP
Sbjct: 316 ST-MADTIELGAVERLLGNHAAN--VTMSSTKSATGHLLGAAGAIEAIFSILAIRDQVAP 372
Query: 309 LTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
T+NL P + P A + I ALSNSFGFGGTNAS++F K
Sbjct: 373 PTINLDNPAVETPVDLAP-NAKRARKIDVALSNSFGFGGTNASVIFGK 419
|
|
| UNIPROTKB|Q0C090 fabF "3-oxoacyl-[acyl-carrier-protein] synthase 2" [Hyphomonas neptunium ATCC 15444 (taxid:228405)] | Back alignment and assigned GO terms |
|---|
Score = 804 (288.1 bits), Expect = 4.7e-80, P = 4.7e-80
Identities = 168/348 (48%), Positives = 214/348 (61%)
Query: 9 KSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXXXXDTVDAAQMICEKRL 68
+ I FI Y + AADEAL D+ QKER GV + + + E
Sbjct: 82 RRIDEFILYGIAAADEALADSGLKLETDDQKERAGVMIGSGIGGLETIYETSITLHEHGP 141
Query: 69 RRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMV 128
R++SPFFIP LIN+ASG +S+++G +GPNH+ VTACATGAH+IGD+AR+I +GD+DVMV
Sbjct: 142 RKVSPFFIPASLINLASGQISIRHGLKGPNHSVVTACATGAHAIGDSARLISYGDADVMV 201
Query: 129 AGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXXH 188
AGG E+ I L +AGFC ++A++T +N TP++ASRP+D RDGF H
Sbjct: 202 AGGAEAVIGRLGIAGFCAAKAMSTSFNDTPEKASRPYDKDRDGFVMGEGAAVLVLEEYEH 261
Query: 189 AKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 248
AK RGAKIYAEV GYG++GDAHHIT P +G AM ALK SG+ ++DYVNAH T
Sbjct: 262 AKARGAKIYAEVAGYGLTGDAHHITAPAEGAEGGYRAMKMALKNSGIDPAEIDYVNAHGT 321
Query: 249 STPLGDTVEATAIRTVFSDHATSGSLAFSSTKXXXXXXXXXXXXVEAIFAVLAIHHGVAP 308
STP GD EA A+ F DHA + ++ SSTK +EA F LAI V P
Sbjct: 322 STPKGDEGEAGAVERAFGDHAKN--ISMSSTKSAVGHLLGAAGAIEAAFCALAIRDQVMP 379
Query: 309 LTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
TLNL P + +P A K + AA+SNSFGFGGTNASL+ K
Sbjct: 380 PTLNLDNPSFETVLDLIPHKAKKGR-VRAAMSNSFGFGGTNASLVLRK 426
|
|
| UNIPROTKB|E2R866 OXSM "3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
Identities = 162/347 (46%), Positives = 213/347 (61%)
Query: 8 LKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXXXXDTVDAAQMICEKR 67
+KS++ A+ AA+ A+ D+ WLP + + TGV + A M K
Sbjct: 113 IKSMSSPTIMAIGAAELAMRDSGWLPQSEADQAATGVAIGMGMVPLEIVSETALMFQTKG 172
Query: 68 LRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVM 127
++SPFF+P+IL+NMA+G VS++Y +GPNHA TAC TGAH++GD+ R I GD+DVM
Sbjct: 173 YSKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTACTTGAHAVGDSFRFIAQGDADVM 232
Query: 128 VAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXX 187
VAGGT+S I LS+AGF ++RAL+T N P+ A RPF RDGF
Sbjct: 233 VAGGTDSCISPLSLAGFSRARALST--NPDPKLACRPFHPKRDGFVMGEGAAVLVLEEYD 290
Query: 188 HAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHA 247
HA +RGA+IYAEV GYG+SGDA HIT P +G+GA+ M A+K +G+Q ++ YVNAHA
Sbjct: 291 HAVQRGARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAAVKDAGVQPEEISYVNAHA 350
Query: 248 TSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKXXXXXXXXXXXXVEAIFAVLAIHHGVA 307
TSTPLGD E AI+ +F DHA + LA SSTK VEA F LA ++
Sbjct: 351 TSTPLGDAAENKAIKHLFKDHAPA--LAVSSTKGATGHLLGAAGAVEAAFTALACYYQKL 408
Query: 308 PLTLNLAKPDPIFNDNFMPLTAS--KDMPISAALSNSFGFGGTNASL 352
P TLNL +P F+ N++PL A K L+NSFGFGGTNA+L
Sbjct: 409 PPTLNLDCTEPEFDLNYVPLKAQEWKIEKRCIGLTNSFGFGGTNATL 455
|
|
| POMBASE|SPBC887.13c SPBC887.13c "3-oxoacyl-[acyl-carrier-protein]-synthase condensing enzyme (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
Identities = 155/352 (44%), Positives = 216/352 (61%)
Query: 8 LKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXXXXDTVDAAQMICEKR 67
L+ +A F AL +A EAL DA+W+ D+ +K TGV D ++ ++ +
Sbjct: 73 LREVATFTQLALTSAAEALKDARWIDIDEQEKLATGVCFGTGIGNLDDALNENGVLNKAG 132
Query: 68 LRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVM 127
+R++SP I +ILINM +G++S +YGF NH TACA G H+IGDA I+ G +DV+
Sbjct: 133 IRKVSPRVISKILINMPAGYISQRYGFTALNHTTTTACAAGCHAIGDAFNFIKLGHADVI 192
Query: 128 VAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXX 187
+AGG+ES I+ L++AGF K+R+L+TK+N P+ ASRPFD RDGF
Sbjct: 193 IAGGSESCINPLTVAGFSKARSLSTKFNDNPKAASRPFDANRDGFVIGEGSAALVLEELE 252
Query: 188 HAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHA 247
HAK R A IYAE+ GYG++ D++HIT P+ +G A AM R+LKQ+GL + Q+DY+NAHA
Sbjct: 253 HAKNRNAHIYAEIVGYGLASDSYHITAPNPNGDAAYYAMKRSLKQAGLSASQLDYINAHA 312
Query: 248 TSTPLGDTVEATAIRTVFSD-HATSGSLAFSSTKXXXXXXXXXXXXVEAIFAVLAIHHGV 306
TST LGD E+ AI + D + + SS+K +E+++ VL + GV
Sbjct: 313 TSTKLGDVAESIAITRLLCDVNRNPEAFPVSSSKGSIGHLLGAAGAIESVYTVLTVQKGV 372
Query: 307 APLTLNLAKPD-PI-FNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
P TLN D P F +++P A K+ I+ ALSNSFGFGGTNASL F K
Sbjct: 373 LPPTLNFEYSDIPQQFQCDYVPNVA-KESRINVALSNSFGFGGTNASLCFKK 423
|
|
| UNIPROTKB|F1MXW5 OXSM "3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
Identities = 160/346 (46%), Positives = 207/346 (59%)
Query: 9 KSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXXXXDTVDAAQMICEKRL 68
KS++ A+ AA+ AL DA W P + + TGV + A K
Sbjct: 114 KSMSPPTVMAIAAAELALKDAGWHPQSEADQAATGVAIGMGMVPLEVISETALTFQTKGY 173
Query: 69 RRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMV 128
++SPFF+P+IL+NMASG VS+++ +GPNHA TAC TGAH++GD+ R + GD+DVMV
Sbjct: 174 SKVSPFFVPKILVNMASGQVSIRHKLKGPNHAVSTACTTGAHAVGDSFRFVAHGDADVMV 233
Query: 129 AGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXXH 188
AGGT+S I LS+AGF ++RAL+T N P+ A RPF RDGF H
Sbjct: 234 AGGTDSCISPLSLAGFARARALST--NTDPKSACRPFHPQRDGFVMGEGAAVLVLEEHRH 291
Query: 189 AKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 248
A +RGA++YAE+ GYG+SGDA HIT P G+GA M A+K +G+Q +V Y+NAHAT
Sbjct: 292 ALRRGARVYAEIVGYGLSGDAGHITAPDPGGEGAFRCMAAAVKDAGIQPEEVSYINAHAT 351
Query: 249 STPLGDTVEATAIRTVFSDHATSGSLAFSSTKXXXXXXXXXXXXVEAIFAVLAIHHGVAP 308
STPLGD E AI+ +F DHA LA SSTK EA F LA +H P
Sbjct: 352 STPLGDAAENKAIKQLFKDHAHV--LAVSSTKGATGHLLGAAGAAEAAFTALACYHRKLP 409
Query: 309 LTLNLAKPDPIFNDNFMPLTAS--KDMPISAALSNSFGFGGTNASL 352
TLNL +P F+ N++PL A K AL+NSFGFGGTNA+L
Sbjct: 410 PTLNLDCTEPHFDLNYVPLKAQEWKAENRRIALTNSFGFGGTNATL 455
|
|
| UNIPROTKB|Q0VCA7 OXSM "3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
Identities = 160/346 (46%), Positives = 207/346 (59%)
Query: 9 KSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXXXXDTVDAAQMICEKRL 68
KS++ A+ AA+ AL DA W P + + TGV + A K
Sbjct: 114 KSMSPPTVMAIAAAELALKDAGWHPQSEADQAATGVAIGMGMVPLEVISETALTFQTKGY 173
Query: 69 RRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMV 128
++SPFF+P+IL+NMASG VS+++ +GPNHA TAC TGAH++GD+ R + GD+DVMV
Sbjct: 174 SKVSPFFVPKILVNMASGQVSIRHKLKGPNHAVSTACTTGAHAVGDSFRFVAHGDADVMV 233
Query: 129 AGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXXH 188
AGGT+S I LS+AGF ++RAL+T N P+ A RPF RDGF H
Sbjct: 234 AGGTDSCISPLSLAGFARARALST--NTDPKSACRPFHPQRDGFVMGEGAAVLVLEEHRH 291
Query: 189 AKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 248
A +RGA++YAE+ GYG+SGDA HIT P G+GA M A+K +G+Q +V Y+NAHAT
Sbjct: 292 ALRRGARVYAEIVGYGLSGDAGHITAPDPGGEGAFRCMAAAVKDAGIQPEEVSYINAHAT 351
Query: 249 STPLGDTVEATAIRTVFSDHATSGSLAFSSTKXXXXXXXXXXXXVEAIFAVLAIHHGVAP 308
STPLGD E AI+ +F DHA LA SSTK EA F LA +H P
Sbjct: 352 STPLGDAAENKAIKQLFKDHAHV--LAVSSTKGATGHLLGTAGAAEAAFTALACYHRKLP 409
Query: 309 LTLNLAKPDPIFNDNFMPLTAS--KDMPISAALSNSFGFGGTNASL 352
TLNL +P F+ N++PL A K AL+NSFGFGGTNA+L
Sbjct: 410 PTLNLDCTEPHFDLNYVPLKAQEWKAENRRIALTNSFGFGGTNATL 455
|
|
| TIGR_CMR|ECH_0882 ECH_0882 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)] | Back alignment and assigned GO terms |
|---|
Score = 743 (266.6 bits), Expect = 1.4e-73, P = 1.4e-73
Identities = 157/351 (44%), Positives = 216/351 (61%)
Query: 8 LKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXXXXDTVDAAQMICEKR 67
LK + FI + + +A +A++D+ L R GV + E+
Sbjct: 76 LKKMDTFIHFGIASATQAINDSNLLDYKDLDYSRVGVIVGSGIGGLQFIEKTVICLKERG 135
Query: 68 LRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVM 127
+R+SPFFIP LIN+ SGH+SMKYGF G N A VTAC+TGA +IG+AAR+IQ G++DV+
Sbjct: 136 PKRISPFFIPASLINLTSGHISMKYGFTGLNDAVVTACSTGAQAIGNAARVIQSGEADVI 195
Query: 128 VAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXX 187
+AGGTES+I + +AGF +AL+TK+N TP+ ASRP+D RDGF
Sbjct: 196 IAGGTESAICRIGIAGFAAMKALSTKFNDTPELASRPWDKQRDGFVMGEGSGVVILEDYE 255
Query: 188 HAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHA 247
HAKKRGA+IY E+ GYGM+ DA+H++ PH +GKG I ++ AL + L ++Y+NAH
Sbjct: 256 HAKKRGARIYGELLGYGMTSDAYHMSAPHPEGKGGIKSIELALSNAQLNPESINYINAHG 315
Query: 248 TSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKXXXXXXXXXXXXVEAIFAVLAIHHGVA 307
TSTP+GD++E AI+ VF + + SSTK VEAIF +LA++ G+A
Sbjct: 316 TSTPIGDSIEIQAIKNVFKESVYK--VPISSTKSSIGHLLGAAGSVEAIFCILAMNTGIA 373
Query: 308 PLTLNL--AKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
P TLNL + DP N +PL A ++ I+ LSNSFGFGG N SL+F K
Sbjct: 374 PPTLNLHESSEDPKLN--LVPLNA-QEHKINYCLSNSFGFGGVNVSLVFGK 421
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q83E37 | FABF_COXBU | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4873 | 0.9692 | 0.8381 | yes | no |
| P0AAI8 | FABF_SHIFL | 2, ., 3, ., 1, ., 1, 7, 9 | 0.5312 | 0.7960 | 0.6900 | yes | no |
| Q9NWU1 | OXSM_HUMAN | 2, ., 3, ., 1, ., 4, 1 | 0.5302 | 0.9525 | 0.7429 | yes | no |
| Q8NXE1 | FABF_STAAW | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4742 | 0.9608 | 0.8309 | yes | no |
| P0AAI6 | FABF_ECOL6 | 2, ., 3, ., 1, ., 1, 7, 9 | 0.5312 | 0.7960 | 0.6900 | yes | no |
| P57193 | FABB_BUCAI | 2, ., 3, ., 1, ., 4, 1 | 0.3563 | 0.9664 | 0.8522 | yes | no |
| O94297 | OXSM_SCHPO | 2, ., 3, ., 1, ., 4, 1 | 0.5142 | 0.9720 | 0.8169 | yes | no |
| O34340 | FABF_BACSU | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4971 | 0.9608 | 0.8329 | yes | no |
| Q8L3X9 | KASM_ARATH | 2, ., 3, ., 1, ., 4, 1 | 0.8150 | 0.9664 | 0.7505 | yes | no |
| Q9KQH9 | FABF_VIBCH | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4927 | 0.9497 | 0.8212 | yes | no |
| Q5TKS0 | FABF_STAAU | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4739 | 0.9497 | 0.8436 | yes | no |
| Q99VA6 | FABF_STAAM | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4742 | 0.9608 | 0.8309 | yes | no |
| Q5HHA1 | FABF_STAAC | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4742 | 0.9608 | 0.8309 | yes | no |
| P55338 | FABF_VIBHA | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4970 | 0.9441 | 0.8144 | yes | no |
| Q0VCA7 | OXSM_BOVIN | 2, ., 3, ., 1, ., 4, 1 | 0.5289 | 0.9497 | 0.7391 | yes | no |
| Q7A6F8 | FABF_STAAN | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4742 | 0.9608 | 0.8309 | yes | no |
| Q6GIA3 | FABF_STAAR | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4742 | 0.9608 | 0.8309 | yes | no |
| P56902 | FABF_RHIME | 2, ., 3, ., 1, ., 1, 7, 9 | 0.5574 | 0.9608 | 0.8171 | yes | no |
| Q9D404 | OXSM_MOUSE | 2, ., 3, ., 1, ., 4, 1 | 0.5317 | 0.9497 | 0.7407 | yes | no |
| Q6GAU2 | FABF_STAAS | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4742 | 0.9608 | 0.8309 | yes | no |
| Q8KA28 | FABB_BUCAP | 2, ., 3, ., 1, ., 4, 1 | 0.3551 | 0.9385 | 0.8255 | yes | no |
| Q89AY4 | FABB_BUCBP | 2, ., 3, ., 1, ., 4, 1 | 0.3870 | 0.9413 | 0.8280 | yes | no |
| P43710 | FABB_HAEIN | 2, ., 3, ., 1, ., 4, 1 | 0.3915 | 0.9469 | 0.8349 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | 0.976 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 358 | |||
| PLN02836 | 437 | PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protei | 0.0 | |
| TIGR03150 | 407 | TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protei | 0.0 | |
| PRK07314 | 411 | PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protei | 0.0 | |
| cd00834 | 406 | cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot | 1e-172 | |
| PTZ00050 | 421 | PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein | 1e-167 | |
| PRK06333 | 424 | PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protei | 1e-158 | |
| COG0304 | 412 | COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy | 1e-145 | |
| PRK08439 | 406 | PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protei | 1e-116 | |
| PRK08722 | 414 | PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protei | 1e-107 | |
| PRK14691 | 342 | PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protei | 8e-99 | |
| PLN02787 | 540 | PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protei | 6e-94 | |
| PRK07967 | 406 | PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protei | 9e-92 | |
| PRK07910 | 418 | PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protei | 1e-84 | |
| PRK09116 | 405 | PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protei | 1e-73 | |
| PRK06501 | 425 | PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protei | 2e-72 | |
| PRK05952 | 381 | PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protei | 1e-71 | |
| cd00833 | 421 | cd00833, PKS, polyketide synthases (PKSs) polymeri | 4e-68 | |
| cd00828 | 407 | cd00828, elong_cond_enzymes, "elongating" condensi | 1e-66 | |
| PRK09185 | 392 | PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protei | 6e-66 | |
| PRK07103 | 410 | PRK07103, PRK07103, polyketide beta-ketoacyl:acyl | 3e-54 | |
| cd00825 | 332 | cd00825, decarbox_cond_enzymes, decarboxylating co | 5e-53 | |
| COG3321 | 1061 | COG3321, COG3321, Polyketide synthase modules and | 8e-44 | |
| pfam00109 | 243 | pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, | 3e-43 | |
| pfam02801 | 119 | pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase | 4e-42 | |
| TIGR02813 | 2582 | TIGR02813, omega_3_PfaA, polyketide-type polyunsat | 2e-39 | |
| cd00832 | 399 | cd00832, CLF, Chain-length factor (CLF) is a facto | 2e-36 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 5e-30 | |
| smart00825 | 298 | smart00825, PKS_KS, Beta-ketoacyl synthase | 2e-23 | |
| PRK06147 | 348 | PRK06147, PRK06147, 3-oxoacyl-(acyl carrier protei | 1e-06 | |
| cd00751 | 386 | cd00751, thiolase, Thiolase are ubiquitous enzymes | 7e-06 | |
| PRK06519 | 398 | PRK06519, PRK06519, 3-oxoacyl-(acyl carrier protei | 7e-05 | |
| PRK05790 | 393 | PRK05790, PRK05790, putative acyltransferase; Prov | 2e-04 | |
| PRK09051 | 394 | PRK09051, PRK09051, beta-ketothiolase; Provisional | 3e-04 | |
| PRK06445 | 394 | PRK06445, PRK06445, acetyl-CoA acetyltransferase; | 4e-04 | |
| cd00751 | 386 | cd00751, thiolase, Thiolase are ubiquitous enzymes | 6e-04 | |
| PRK09052 | 399 | PRK09052, PRK09052, acetyl-CoA acetyltransferase; | 6e-04 | |
| TIGR01930 | 386 | TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltrans | 9e-04 | |
| pfam00108 | 262 | pfam00108, Thiolase_N, Thiolase, N-terminal domain | 0.001 | |
| PLN02644 | 394 | PLN02644, PLN02644, acetyl-CoA C-acetyltransferase | 0.001 | |
| COG0183 | 392 | COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid | 0.004 |
| >gnl|CDD|215449 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Score = 677 bits (1749), Expect = 0.0
Identities = 291/347 (83%), Positives = 321/347 (92%)
Query: 9 KSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRL 68
+S +RFI YALCAADEAL DA+WLPS+ KERTGVSIGGGIGSI+D ++AAQ+ICEKRL
Sbjct: 88 RSSSRFIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRL 147
Query: 69 RRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMV 128
RRLSPFF+PRILINMA+GHVS++YGFQGPNHAAVTACATGAHSIGDA RMIQFGD+DVMV
Sbjct: 148 RRLSPFFVPRILINMAAGHVSIRYGFQGPNHAAVTACATGAHSIGDAFRMIQFGDADVMV 207
Query: 129 AGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEH 188
AGGTESSIDALS+AGF +SRAL+TK+N P EASRPFDC RDGFVIGEG+GVLVLEELEH
Sbjct: 208 AGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDRDGFVIGEGAGVLVLEELEH 267
Query: 189 AKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 248
AK+RGAKIYAEVRGYGMSGDAHHITQPH DG+GA+LAMTRAL+QSGL +QVDYVNAHAT
Sbjct: 268 AKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHPNQVDYVNAHAT 327
Query: 249 STPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAP 308
STPLGD VEA AI+TVFS+HATSG LAFSSTKGA GHLLGAAGAVEAIF+VLAIHHG+AP
Sbjct: 328 STPLGDAVEARAIKTVFSEHATSGGLAFSSTKGATGHLLGAAGAVEAIFSVLAIHHGIAP 387
Query: 309 LTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355
TLNL +PDPIF+D F+PLTASK M I AALSNSFGFGGTNASLLFT
Sbjct: 388 PTLNLERPDPIFDDGFVPLTASKAMLIRAALSNSFGFGGTNASLLFT 434
|
Length = 437 |
| >gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Score = 515 bits (1330), Expect = 0.0
Identities = 201/346 (58%), Positives = 250/346 (72%), Gaps = 5/346 (1%)
Query: 9 KSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRL 68
+ + RFI YAL AA EA+ D+ ++ ER GV IG GIG + + ++ EK
Sbjct: 66 RRMDRFIQYALAAAKEAVEDSGLDIEEE-DAERVGVIIGSGIGGLETIEEQHIVLLEKGP 124
Query: 69 RRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMV 128
RR+SPFFIP +INMA+G +S++YG +GPNHA VTACATG H+IGDA R+IQ GD+DVM+
Sbjct: 125 RRVSPFFIPMSIINMAAGQISIRYGAKGPNHAVVTACATGTHAIGDAFRLIQRGDADVMI 184
Query: 129 AGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEH 188
AGG E++I L +AGF +AL+T N P++ASRPFD RDGFV+GEG+GVLVLEELEH
Sbjct: 185 AGGAEAAITPLGIAGFAAMKALST-RNDDPEKASRPFDKDRDGFVMGEGAGVLVLEELEH 243
Query: 189 AKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 248
AK RGAKIYAE+ GYGMSGDA+HIT P +G+GA AM ALK +G+ VDY+NAH T
Sbjct: 244 AKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDYINAHGT 303
Query: 249 STPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAP 308
STPLGD E AI+ VF DHA LA SSTK GHLLGAAGA+EAIF VLA+ G+ P
Sbjct: 304 STPLGDKAETKAIKRVFGDHAY--KLAVSSTKSMTGHLLGAAGAIEAIFTVLALRDGIVP 361
Query: 309 LTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLF 354
T+NL PDP + +++P A ++ I ALSNSFGFGG NASL+F
Sbjct: 362 PTINLDNPDPECDLDYVPNEA-REAKIDYALSNSFGFGGHNASLVF 406
|
3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 407 |
| >gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 515 bits (1328), Expect = 0.0
Identities = 198/344 (57%), Positives = 251/344 (72%), Gaps = 5/344 (1%)
Query: 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLS 72
RFI Y + AA +A+ DA +++ +R GV IG GIG + + + EK RR+S
Sbjct: 71 RFIQYGIAAAKQAVEDAGLEITEE-NADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVS 129
Query: 73 PFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGT 132
PFF+P +INMA+GHVS++YG +GPNH+ VTACATGAH+IGDAAR+I +GD+DVMVAGG
Sbjct: 130 PFFVPMAIINMAAGHVSIRYGAKGPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGA 189
Query: 133 ESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKR 192
E++I L +AGF +RAL+T+ N P+ ASRPFD RDGFV+GEG+G+LVLEELEHAK R
Sbjct: 190 EAAITPLGIAGFAAARALSTR-NDDPERASRPFDKDRDGFVMGEGAGILVLEELEHAKAR 248
Query: 193 GAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 252
GAKIYAEV GYGM+GDA+H+T P DG+GA AM ALK +G+ +DY+NAH TSTP
Sbjct: 249 GAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDYINAHGTSTPA 308
Query: 253 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLN 312
GD E AI+ VF +HA +A SSTK GHLLGAAGAVEAIF+VLAI V P T+N
Sbjct: 309 GDKAETQAIKRVFGEHAY--KVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTIN 366
Query: 313 LAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
L PD + +++P A ++ I ALSNSFGFGGTNASL+F +
Sbjct: 367 LDNPDEECDLDYVPNEA-RERKIDYALSNSFGFGGTNASLVFKR 409
|
Length = 411 |
| >gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Score = 485 bits (1251), Expect = e-172
Identities = 191/347 (55%), Positives = 247/347 (71%), Gaps = 5/347 (1%)
Query: 8 LKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKR 67
L+ + RF +AL AA+EAL DA P + ER GV IG GIG ++ +A + + EK
Sbjct: 65 LRRMDRFAQFALAAAEEALADAGLDPEELD-PERIGVVIGSGIGGLATIEEAYRALLEKG 123
Query: 68 LRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVM 127
RR+SPFF+P L NMA+G V+++ G +GPN+ TACA+GAH+IGDAAR+I+ G +DV+
Sbjct: 124 PRRVSPFFVPMALPNMAAGQVAIRLGLRGPNYTVSTACASGAHAIGDAARLIRLGRADVV 183
Query: 128 VAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELE 187
+AGG E+ I L++AGF RAL+T+ + P++ASRPFD RDGFV+GEG+GVLVLE LE
Sbjct: 184 IAGGAEALITPLTLAGFAALRALSTRND-DPEKASRPFDKDRDGFVLGEGAGVLVLESLE 242
Query: 188 HAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHA 247
HAK RGAKIYAE+ GYG S DA+HIT P DG+GA AM AL +GL +DY+NAH
Sbjct: 243 HAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDYINAHG 302
Query: 248 TSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVA 307
TSTPL D E+ AI+ VF +HA + SSTK GHLLGAAGAVEAI +LA+ GV
Sbjct: 303 TSTPLNDAAESKAIKRVFGEHAK--KVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVL 360
Query: 308 PLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLF 354
P T+NL +PDP + +++P A ++ PI ALSNSFGFGG NASL+F
Sbjct: 361 PPTINLEEPDPECDLDYVPNEA-REAPIRYALSNSFGFGGHNASLVF 406
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406 |
| >gnl|CDD|240245 PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Score = 472 bits (1216), Expect = e-167
Identities = 191/346 (55%), Positives = 244/346 (70%), Gaps = 3/346 (0%)
Query: 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLS 72
R +A+ AA EAL DAK + +ER GV+IG GIGS++D D + + EK R+S
Sbjct: 76 RATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVS 135
Query: 73 PFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGT 132
P+FIP+IL NMA+G V++K+ +GP+ +AVTACATGAH IG+A R I++G++D+M+ GGT
Sbjct: 136 PYFIPKILGNMAAGLVAIKHKLKGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGT 195
Query: 133 ESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKR 192
E+SI +S AGF + RAL TKYN PQ ASRPFD R GFV+GEG+G+LVLEELEHA +R
Sbjct: 196 EASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDRAGFVMGEGAGILVLEELEHALRR 255
Query: 193 GAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSG-LQSHQVDYVNAHATSTP 251
GAKIYAE+RGYG S DAHHIT PH DG+GA M ALK + + VDYVNAHATSTP
Sbjct: 256 GAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANININDVDYVNAHATSTP 315
Query: 252 LGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTL 311
+GD +E AI+ VF D L SSTKG +GHLLGAAGAVE+I +L+++ + P T+
Sbjct: 316 IGDKIELKAIKKVFGDSGAP-KLYVSSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTI 374
Query: 312 NLAKPDPIFNDNFMPLTASKDM-PISAALSNSFGFGGTNASLLFTK 356
NL PD + N + + + I A LS SFGFGG N +LLFTK
Sbjct: 375 NLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFTK 420
|
Length = 421 |
| >gnl|CDD|235781 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 449 bits (1157), Expect = e-158
Identities = 183/349 (52%), Positives = 237/349 (67%), Gaps = 5/349 (1%)
Query: 9 KSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRL 68
+ + RFI +A+ AA EAL A W P +ERT IG G+G +A + + +
Sbjct: 77 RKMDRFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGP 136
Query: 69 RRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMV 128
RRLSPF IP L NMA+GHVS++YGF+GP A VTACA G +IGDAAR+I+ G++DV V
Sbjct: 137 RRLSPFTIPSFLTNMAAGHVSIRYGFKGPLGAPVTACAAGVQAIGDAARLIRSGEADVAV 196
Query: 129 AGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEH 188
GGTE++ID +S+AGF +RAL+T++N P++ASRPFD RDGFV+GEG+G+LV+E LEH
Sbjct: 197 CGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDRDGFVMGEGAGILVIETLEH 256
Query: 189 AKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 248
A RGA AE+ GYG S DA+H+T DG+GA AM AL+Q+G+ +V ++NAHAT
Sbjct: 257 ALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEEVQHLNAHAT 316
Query: 249 STPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAP 308
STP+GD E AI+ VF LA SSTK A GHLLGAAG VEAIF +LA+ +AP
Sbjct: 317 STPVGDLGEVAAIKKVF---GHVSGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAP 373
Query: 309 LTLNLAKPDPIFND-NFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
TLNL PDP + + A + M + ALSN FGFGG NAS+LF +
Sbjct: 374 PTLNLENPDPAAEGLDVVANKA-RPMDMDYALSNGFGFGGVNASILFRR 421
|
Length = 424 |
| >gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 417 bits (1073), Expect = e-145
Identities = 183/352 (51%), Positives = 240/352 (68%), Gaps = 9/352 (2%)
Query: 8 LKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAA-QMICEK 66
+ + RF A+ AA EAL DA + R GV+IG GIG + D ++ E
Sbjct: 65 RRFMDRFSQLAVVAAVEALEDAGLDN-ELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEG 123
Query: 67 RLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDV 126
+R+SPF +P++L N+A+G+V++ +G +GPN+ VTACATGAH+IGDA R+I+ G +DV
Sbjct: 124 LRKRISPFLVPKMLPNLAAGNVAIVFGLKGPNYTPVTACATGAHAIGDAVRLIRLGKADV 183
Query: 127 MVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEEL 186
++AGG E++I L +AGF RAL+T+ N P++ASRPFD RDGFVIGEG+G LVLEEL
Sbjct: 184 VIAGGAEAAITPLGIAGFEAMRALSTR-NDDPEKASRPFDKNRDGFVIGEGAGALVLEEL 242
Query: 187 EHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAH 246
EHA RGAKIYAE+ GYG + DA+HIT P DG+GAI AM AL +GL +DY+NAH
Sbjct: 243 EHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPEDIDYINAH 302
Query: 247 ATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 306
TSTP D E+ AI+ VF +HA SL SSTK GH LGAAGAVEAI ++LA+ G+
Sbjct: 303 GTSTPANDKAESLAIKRVFGEHA--KSLPVSSTKSLTGHTLGAAGAVEAIISLLALRDGI 360
Query: 307 APLTLNLAKPDPIFNDNFMPLTASK--DMPISAALSNSFGFGGTNASLLFTK 356
P T+NL PDP D + + ++ + AALSNSFGFGGTNASL+F +
Sbjct: 361 IPPTINLDNPDPEAAD--LDVVPNEARTGAVRAALSNSFGFGGTNASLVFKR 410
|
Length = 412 |
| >gnl|CDD|236265 PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 342 bits (879), Expect = e-116
Identities = 163/350 (46%), Positives = 230/350 (65%), Gaps = 11/350 (3%)
Query: 8 LKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKR 67
+K RFI L AA EA+ DA +LP + ER GVS GIG + ++ +IC ++
Sbjct: 66 VKKADRFIQLGLKAAREAMKDAGFLPEEL-DAERFGVSSASGIGGLP-NIEKNSIICFEK 123
Query: 68 -LRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDV 126
R++SPFFIP L+NM G +S+++G +GPN ++VTACA G H+I +A + I G +D
Sbjct: 124 GPRKISPFFIPSALVNMLGGFISIEHGLKGPNLSSVTACAAGTHAIIEAVKTIMLGGADK 183
Query: 127 MVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEEL 186
M+ G ES+I + + GF +AL+T+ N P++ASRPFD RDGFV+GEG+G LVLEE
Sbjct: 184 MLVVGAESAICPVGIGGFAAMKALSTR-NDDPKKASRPFDKDRDGFVMGEGAGALVLEEY 242
Query: 187 EHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAH 246
E AKKRGAKIYAE+ G+G SGDA+HIT P + G + AM AL+ +G + ++DY+NAH
Sbjct: 243 ESAKKRGAKIYAEIIGFGESGDANHITSPAPE--GPLRAMKAALEMAG--NPKIDYINAH 298
Query: 247 ATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 306
TSTP D E A++ +F + SSTKG IGH LGAAGA+EA+ +++A+ G+
Sbjct: 299 GTSTPYNDKNETAALKELFGSKEKVPPV--SSTKGQIGHCLGAAGAIEAVISIMAMRDGI 356
Query: 307 APLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
P T+N PDP + +++P A K ++ +SNSFGFGGTN ++F K
Sbjct: 357 LPPTINQETPDPECDLDYIPNVARK-AELNVVMSNSFGFGGTNGVVIFKK 405
|
Length = 406 |
| >gnl|CDD|181539 PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 319 bits (818), Expect = e-107
Identities = 169/343 (49%), Positives = 226/343 (65%), Gaps = 3/343 (0%)
Query: 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSP 73
FI Y + A +AL D+ L + R GV+IG GIG + Q + EK R++SP
Sbjct: 74 FIQYGIAAGIQALDDSG-LEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSP 132
Query: 74 FFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTE 133
FF+P ++NM +G++S+ G +GPN A TAC TG H+IG AARMI +GD+D MVAGG E
Sbjct: 133 FFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAE 192
Query: 134 SSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRG 193
+ L MAGF ++AL+T+ N PQ+ASRP+D RDGFV+G+G+G++VLEE EHAK RG
Sbjct: 193 KASTPLGMAGFGAAKALSTR-NDEPQKASRPWDKDRDGFVLGDGAGMMVLEEYEHAKARG 251
Query: 194 AKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG 253
AKIYAE+ G+GMSGDA+H+T P DG G LAM A++ +G+ Q+ YVNAH TSTP G
Sbjct: 252 AKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAG 311
Query: 254 DTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNL 313
D E I+ + + L SSTK GHLLGAAG+VEAI V+++ + P T+NL
Sbjct: 312 DVAEIKGIKRALGEAGSKQVLV-SSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINL 370
Query: 314 AKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
P+ + + +P TA K + A+ NSFGFGGTN SL+F K
Sbjct: 371 DDPEEGLDIDLVPHTARKVESMEYAICNSFGFGGTNGSLIFKK 413
|
Length = 414 |
| >gnl|CDD|173154 PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Score = 295 bits (757), Expect = 8e-99
Identities = 161/319 (50%), Positives = 215/319 (67%), Gaps = 3/319 (0%)
Query: 38 QKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGP 97
++ERT IG GIG A + + +RLSPF +P L+N+A+GHVS+K+ F+GP
Sbjct: 24 KQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKGP 83
Query: 98 NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGT 157
A VTACA G +IGDA RMI+ ++DV + GG E+ ID +S+AGF +RAL+T +N T
Sbjct: 84 IGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNST 143
Query: 158 PQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHI 217
P++ASRPFD RDGFV+GEG+G+L++EELEHA RGAK AE+ GYG S DA+H+T
Sbjct: 144 PEKASRPFDTARDGFVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAE 203
Query: 218 DGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS 277
DG GA AM AL+Q+G+ QV ++NAHATSTP+GD E AI+ +F + S +LA +
Sbjct: 204 DGDGAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGE---SNALAIT 260
Query: 278 STKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISA 337
STK A GHLLGAAG +E IF VLA+ + P TLNL PDP + ++ ++
Sbjct: 261 STKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGLNIIAGNAQPHDMTY 320
Query: 338 ALSNSFGFGGTNASLLFTK 356
ALSN FGF G NAS+L +
Sbjct: 321 ALSNGFGFAGVNASILLKR 339
|
Length = 342 |
| >gnl|CDD|215421 PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Score = 289 bits (742), Expect = 6e-94
Identities = 154/351 (43%), Positives = 213/351 (60%), Gaps = 13/351 (3%)
Query: 9 KSIARFIAYALCAADEALHDAKWLPS--DQGQKERTGVSIG---GGIGSISDTVDAAQMI 63
K + +F+ Y L A +AL D + K + GV IG GG+ +D ++A ++
Sbjct: 194 KRMDKFMLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRI- 252
Query: 64 CEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGD 123
R+++PF +P NM S ++M G+ GPN++ TACAT I +AA I G+
Sbjct: 253 ---SYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGE 309
Query: 124 SDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVL 183
+DVM+ GG++++I + + GF RAL+ + N P +ASRP+D RDGFV+GEG+GVL+L
Sbjct: 310 ADVMLCGGSDAAIIPIGLGGFVACRALSQR-NDDPTKASRPWDMNRDGFVMGEGAGVLLL 368
Query: 184 EELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYV 243
EELEHAKKRGA IYAE G + DA+H+T+PH +G G IL + +AL QSG+ V+Y+
Sbjct: 369 EELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKEDVNYI 428
Query: 244 NAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIH 303
NAHATST GD E A+ F + L +STK IGHLLGAAGAVEAI V AI
Sbjct: 429 NAHATSTKAGDLKEYQALMRCFGQNP---ELRVNSTKSMIGHLLGAAGAVEAIATVQAIR 485
Query: 304 HGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLF 354
G +NL P+ + + + + I ALSNSFGFGG N+S+LF
Sbjct: 486 TGWVHPNINLENPESGVDTKVLVGPKKERLDIKVALSNSFGFGGHNSSILF 536
|
Length = 540 |
| >gnl|CDD|181184 PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Score = 280 bits (717), Expect = 9e-92
Identities = 148/361 (40%), Positives = 213/361 (59%), Gaps = 20/361 (5%)
Query: 3 TRGLILKSIARFI----AYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVD 58
GLI + + RF+ AYA A ++A+ DA L +Q RTG+ G G GS + V+
Sbjct: 56 PTGLIDRKVMRFMGDASAYAYLAMEQAIADAG-LSEEQVSNPRTGLIAGSGGGSTRNQVE 114
Query: 59 AAQ-MICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAAR 117
AA M + +R+ P+ + + + + S ++ + +G N++ +ACAT AH IG+A
Sbjct: 115 AADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIKGVNYSISSACATSAHCIGNAVE 174
Query: 118 MIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEG 177
IQ G D++ AGG E +S F AL+TKYN TP++ASR +D RDGFVI G
Sbjct: 175 QIQLGKQDIVFAGGGEELDWEMSCL-FDAMGALSTKYNDTPEKASRAYDANRDGFVIAGG 233
Query: 178 SGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQS 237
GV+V+EELEHA RGAKIYAE+ GYG + D + + P G+GA+ M AL + + +
Sbjct: 234 GGVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAP--SGEGAVRCMQMAL--ATVDT 289
Query: 238 HQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 297
+DY+N H TSTP+GD E AIR VF D + A S+TK GH LGAAG EAI+
Sbjct: 290 -PIDYINTHGTSTPVGDVKELGAIREVFGDKSP----AISATKSLTGHSLGAAGVQEAIY 344
Query: 298 AVLAIHHGVAPLTLNLAKPDPIFNDNFMPL--TASKDMPISAALSNSFGFGGTNASLLFT 355
++L + HG + N+ + DP MP+ + + ++ +SNSFGFGGTNA+L+F
Sbjct: 345 SLLMMEHGFIAPSANIEELDPQAAG--MPIVTETTDNAELTTVMSNSFGFGGTNATLVFR 402
Query: 356 K 356
+
Sbjct: 403 R 403
|
Length = 406 |
| >gnl|CDD|236129 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 261 bits (670), Expect = 1e-84
Identities = 126/322 (39%), Positives = 177/322 (54%), Gaps = 13/322 (4%)
Query: 39 KERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPN 98
R VSIG G+GS + V A + + LR +SP + + N + V ++ +
Sbjct: 105 TNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKAGV 164
Query: 99 HAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTP 158
V+ACA+G+ +I A R I G++D+ + GG E+ I+A+ +AGF + R + + N P
Sbjct: 165 ITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDP 224
Query: 159 QEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHID 218
A RPFD RDGFV GEG ++V+E EHAK RGA I A + G ++ D H+ P +
Sbjct: 225 AGACRPFDKDRDGFVFGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPN 284
Query: 219 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSS 278
G+ A AMTRA++ +GL +D+VNAHAT T +GD E AI H A +
Sbjct: 285 GERAGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGGHRP----AVYA 340
Query: 279 TKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMP---- 334
K A+GH +GA GAVE+I VLA+ GV P TLNL DP + L P
Sbjct: 341 PKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEID-----LDVVAGEPRPGN 395
Query: 335 ISAALSNSFGFGGTNASLLFTK 356
A++NSFGFGG N +L F +
Sbjct: 396 YRYAINNSFGFGGHNVALAFGR 417
|
Length = 418 |
| >gnl|CDD|181657 PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 233 bits (597), Expect = 1e-73
Identities = 125/354 (35%), Positives = 179/354 (50%), Gaps = 23/354 (6%)
Query: 8 LKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKR 67
++S+ R A A++ AL DA L R G++ G GS M+ E
Sbjct: 67 IRSMGRVSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGS 126
Query: 68 LRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVM 127
+ ++ R++ + + +V + +G +G +AC +G+ IG A I++G VM
Sbjct: 127 MSGITATTYVRMMPHTTAVNVGLFFGLKGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVM 186
Query: 128 VAGGTESSIDALSMAGFCKSRAL-------TTKYNGTPQEASRPFDCGRDGFVIGEGSGV 180
+AGG E C + A T+ N P+ RPFD RDG VIGEG+G
Sbjct: 187 LAGGAEE---------LCPTEAAVFDTLFATSTRNDAPELTPRPFDANRDGLVIGEGAGT 237
Query: 181 LVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQV 240
LVLEELEHAK RGA IYAE+ G+G + D H+TQP + +AM ALK +GL +
Sbjct: 238 LVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQPQAETMQ--IAMELALKDAGLAPEDI 295
Query: 241 DYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVL 300
YVNAH T+T GD E+ A VF + SS K GH LGA GA+EA ++
Sbjct: 296 GYVNAHGTATDRGDIAESQATAAVFGA-----RMPISSLKSYFGHTLGACGALEAWMSIE 350
Query: 301 AIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLF 354
++ G TLNL + DP + ++++ +SN+F FGG N SL+F
Sbjct: 351 MMNEGWFAPTLNLTQVDPACGALDYIMGEAREIDTEYVMSNNFAFGGINTSLIF 404
|
Length = 405 |
| >gnl|CDD|235817 PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 231 bits (590), Expect = 2e-72
Identities = 120/302 (39%), Positives = 169/302 (55%), Gaps = 5/302 (1%)
Query: 54 SDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIG 113
+D +++ R R R + ++ ++G +G + TACA+GA +I
Sbjct: 125 NDAPSYDRLLRAARGGRFDALH-ERFQFGSIADRLADRFGTRGLPISLSTACASGATAIQ 183
Query: 114 DAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFV 173
I+ G++D + T+ S+ A ++ F AL+T+ N P++AS+PF RDGFV
Sbjct: 184 LGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQ-NDPPEKASKPFSKDRDGFV 242
Query: 174 IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQS 233
+ EG+G LVLE LE A RGAKI V G G D+ H T+ DG AI A+ AL +
Sbjct: 243 MAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALADA 302
Query: 234 GLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAV 293
GL Q+DY+NAH TSTP D +E + VF + S+ SS K IGH L AAGAV
Sbjct: 303 GLTPEQIDYINAHGTSTPENDKMEYLGLSAVFGERL--ASIPVSSNKSMIGHTLTAAGAV 360
Query: 294 EAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLL 353
EA+F++L I G P T+N PDP + +P ++D ++A LSNSFGFGG NASL+
Sbjct: 361 EAVFSLLTIQTGRLPPTINYDNPDPAIPLDVVP-NVARDARVTAVLSNSFGFGGQNASLV 419
Query: 354 FT 355
T
Sbjct: 420 LT 421
|
Length = 425 |
| >gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 227 bits (581), Expect = 1e-71
Identities = 110/274 (40%), Positives = 162/274 (59%), Gaps = 16/274 (5%)
Query: 79 ILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDA 138
L + A+ + + G QGP A + ACATG +I +IQ G ++AG E+ I
Sbjct: 120 TLPHQAAIAAARQIGTQGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITP 179
Query: 139 LSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYA 198
L++AGF + AL + + PFD R+G V+GEG +LVLE E A+KRGAKIY
Sbjct: 180 LTLAGFQQMGALA-------KTGAYPFDRQREGLVLGEGGAILVLESAELAQKRGAKIYG 232
Query: 199 EVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEA 258
++ G+G++ DA+H++ P DGK AI A+ + L +SGL +DY++AH T+T L D EA
Sbjct: 233 QILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREA 292
Query: 259 TAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDP 318
I+ +F +A SSTKGA GH LGA+GA+ F++LA+ H P + L +P+
Sbjct: 293 NLIQALFPH-----RVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPE- 346
Query: 319 IFNDNFMPLTASKDMPISAALSNSFGFGGTNASL 352
F+ NF + ++ P+ L SFGFGG NA++
Sbjct: 347 -FDLNF--VRQAQQSPLQNVLCLSFGFGGQNAAI 377
|
Length = 381 |
| >gnl|CDD|238429 cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Score = 219 bits (561), Expect = 4e-68
Identities = 110/344 (31%), Positives = 161/344 (46%), Gaps = 28/344 (8%)
Query: 21 AADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRIL 80
A EAL DA + P + RTGV +G S SD + + + +
Sbjct: 94 VAWEALEDAGYSP-ESLAGSRTGVFVGA---SSSDY----LELLARDPDEIDAYAATGTS 145
Query: 81 INMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS 140
+ +S + +GP+ TAC++ ++ A + ++ G+ D+ + GG +
Sbjct: 146 RAFLANRISYFFDLRGPSLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDM 205
Query: 141 MAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEV 200
GF K+ L+ P RPFD DG+V GEG GV+VL+ L A + G +IYA +
Sbjct: 206 FVGFSKAGMLS------PDGRCRPFDADADGYVRGEGVGVVVLKRLSDALRDGDRIYAVI 259
Query: 201 RGYGMS--GDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEA 258
RG ++ G IT P G+ + RA ++G+ +DYV AH T TPLGD +E
Sbjct: 260 RGSAVNQDGRTKGITAPS--GEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEV 317
Query: 259 TAIRTVFS-DHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPD 317
A+ VF + L S K IGHL AAG I VLA+ HGV P L+ P+
Sbjct: 318 EALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVIPPNLHFETPN 377
Query: 318 PIFNDNFMPLTA--------SKDMPISAALSNSFGFGGTNASLL 353
P + PL + P A + +SFGFGGTNA ++
Sbjct: 378 PKIDFEESPLRVPTEARPWPAPAGPRRAGV-SSFGFGGTNAHVI 420
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. Length = 421 |
| >gnl|CDD|238424 cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Score = 215 bits (549), Expect = 1e-66
Identities = 122/345 (35%), Positives = 175/345 (50%), Gaps = 13/345 (3%)
Query: 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLS 72
R AL A +EAL DA + GV +G G+G + + + R ++
Sbjct: 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGL----RFLRRGGKLDARAVN 126
Query: 73 PFFIPR--ILINMASGHVSMKYGF-QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVA 129
P+ P+ + N +G V++ GP V ACAT ++ A I+ G +D++V
Sbjct: 127 PYVSPKWMLSPNTVAGWVNILLLSSHGPIKTPVGACATALEALDLAVEAIRSGKADIVVV 186
Query: 130 GGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHA 189
GG E ++ ++GF AL+T P+E SRPFD RDGFV EG+GVLVLE E A
Sbjct: 187 GGVEDPLE-EGLSGFANMGALSTAEEE-PEEMSRPFDETRDGFVEAEGAGVLVLERAELA 244
Query: 190 KKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATS 249
RGA IY V G + D + P GKG A+ AL ++GL +D ++AH TS
Sbjct: 245 LARGAPIYGRVAGTASTTDGAGRSVP-AGGKGIARAIRTALAKAGLSLDDLDVISAHGTS 303
Query: 250 TPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPL 309
TP D E+ AI V L ++ K GH GAAGA++ I A+ ++ HG+ P
Sbjct: 304 TPANDVAESRAIAEVAGALG--APLPVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPP 361
Query: 310 TLNLAKPDPIFNDNFMPLTASKD-MPISAALSNSFGFGGTNASLL 353
T NL DP + + + + AAL N+FGFGG+NA+L+
Sbjct: 362 TANLDDVDPDVEHLSVVGLSRDLNLKVRAALVNAFGFGGSNAALV 406
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. Length = 407 |
| >gnl|CDD|236398 PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Score = 213 bits (544), Expect = 6e-66
Identities = 101/262 (38%), Positives = 139/262 (53%), Gaps = 21/262 (8%)
Query: 93 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTT 152
G GP + TAC++ A A R+++ G D + GG +S + L++ GF S +
Sbjct: 148 GLSGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDS-LCRLTLNGF-NSLESLS 205
Query: 153 KYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHI 212
+ RPF RDG IGE + +LE R + G G S DAHH+
Sbjct: 206 P------QPCRPFSANRDGINIGEAAAFFLLE-------REDDAAVALLGVGESSDAHHM 252
Query: 213 TQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSG 272
+ PH +G GAILAM +AL +GL + Y+N H T+TPL D +E+ A+ VF D
Sbjct: 253 SAPHPEGLGAILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGDG---- 308
Query: 273 SLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD 332
+ SSTKG GH LGAAGAVEA LA+ HG+ P N +PDP ++ + ++
Sbjct: 309 -VPCSSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYL-VENAQA 366
Query: 333 MPISAALSNSFGFGGTNASLLF 354
+ I LSNSF FGG N SL+F
Sbjct: 367 LAIRYVLSNSFAFGGNNCSLIF 388
|
Length = 392 |
| >gnl|CDD|180839 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Score = 183 bits (466), Expect = 3e-54
Identities = 114/342 (33%), Positives = 164/342 (47%), Gaps = 24/342 (7%)
Query: 18 ALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIP 77
AL AA EA DA P D +R G+ +GG + + R F P
Sbjct: 84 ALAAAREAWRDAALGPVD---PDRIGLVVGGSNLQQREQALVHE-----TYRDRPAFLRP 135
Query: 78 R-ILINMASGHV---SMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTE 133
L M + V S ++G +G A A+G ++ AAR++Q G D +A G
Sbjct: 136 SYGLSFMDTDLVGLCSEQFGIRGEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGAL 195
Query: 134 SSIDALSMAGFCKSRAL-TTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKR 192
+ A+ + ++ P+ A RPFD RDGF+ GE G +VLE E A++R
Sbjct: 196 MDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRDGFIYGEACGAVVLESAESARRR 255
Query: 193 GAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 252
GA+ YA++ G+ M DA+ P ++G+ + AL+++GL +DYVN H T +PL
Sbjct: 256 GARPYAKLLGWSMRLDANRGPDPSLEGEMR--VIRAALRRAGLGPEDIDYVNPHGTGSPL 313
Query: 253 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLN 312
GD E A+ HA ++TK GH L AAG VE I +L + G + N
Sbjct: 314 GDETELAALFASGLAHAW-----INATKSLTGHGLSAAGIVELIATLLQMRAGFLHPSRN 368
Query: 313 LAKP-DPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLL 353
L +P D F ++ TA I ALS SFGFGG N +L+
Sbjct: 369 LDEPIDERF--RWVGSTAES-ARIRYALSLSFGFGGINTALV 407
|
Length = 410 |
| >gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 177 bits (451), Expect = 5e-53
Identities = 114/350 (32%), Positives = 168/350 (48%), Gaps = 19/350 (5%)
Query: 4 RGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMI 63
R +I + AA+ A+ DA L + + GV +G G GS Q+
Sbjct: 1 RAVITGLGSYVSILGFEAAERAIADAG-LSREYQKNPIVGVVVGTGGGS-----PRFQVF 54
Query: 64 CEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGD 123
+R + P+ + + + ASG ++ G GP + ACA H++ AA +Q G
Sbjct: 55 GADAMRAVGPYVVTKAMFPGASGQIATPLGIHGPAYDVSAACAGSLHALSLAADAVQNGK 114
Query: 124 SDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVL 183
D+++AGG+E + T P++ASR FD DGFV G+G+G LV+
Sbjct: 115 QDIVLAGGSEELAAPMDCEFDAMGALST------PEKASRTFDAAADGFVFGDGAGALVV 168
Query: 184 EELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYV 243
EELEHA RGA IYAE+ G + D + +G A AL +GL +DY+
Sbjct: 169 EELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYL 228
Query: 244 NAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIH 303
AH T TP+GD E +R+ F D S A S+TK G+L AA + AVL +
Sbjct: 229 VAHGTGTPIGDVKELKLLRSEFGDK----SPAVSATKAMTGNLSSAAVVLAVDEAVLMLE 284
Query: 304 HGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLL 353
HG P ++++ + D +T + + AL N FG GGTNA+L+
Sbjct: 285 HGFIPPSIHIEELDE---AGLNIVTETTPRELRTALLNGFGLGGTNATLV 331
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). Length = 332 |
| >gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 8e-44
Identities = 109/342 (31%), Positives = 157/342 (45%), Gaps = 33/342 (9%)
Query: 22 ADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILI 81
A EAL DA P D + TGV G + + A + I
Sbjct: 99 AWEALEDAGIYP-DSLRGSATGVFAGASVADYLLLLLAD-------DEAEPEYAITGNSS 150
Query: 82 NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM 141
++A+G +S G GP+ TAC++ ++ A + ++ G+ D+ +AGG + S
Sbjct: 151 SVAAGRISYVLGLSGPSVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESS 210
Query: 142 AGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVR 201
F L+ P + FD DG+V GEG+GV+VL+ L A++ G +IYA +R
Sbjct: 211 YLFSAGGMLS------PDGRCKAFDADADGYVRGEGAGVVVLKRLSDAERDGDRIYAVIR 264
Query: 202 GYGMSGDAH--HITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEAT 259
G ++ D +T P + + + AL +G+ V YV AH T TPLGD +EA
Sbjct: 265 GSAVNQDGRSNGLTAP--NLEAQADVIREALADAGIDPATVQYVEAHGTGTPLGDPIEAN 322
Query: 260 AIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 319
A+ V+ + A + A S K IGHL AAG I LA+ HG P TL+ P+P
Sbjct: 323 ALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPPTLHFDTPNP- 381
Query: 320 FNDNFM-----------PLTASKDMPISAALSNSFGFGGTNA 350
+F P P A +S SFGFGGTNA
Sbjct: 382 -EIDFDSSPFVVPTEATPWPTGGG-PRRAGVS-SFGFGGTNA 420
|
Length = 1061 |
| >gnl|CDD|215723 pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Score = 149 bits (379), Expect = 3e-43
Identities = 62/178 (34%), Positives = 91/178 (51%), Gaps = 10/178 (5%)
Query: 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLS 72
AL AA EAL DA P+ +RTGV +G G G D + + RR+S
Sbjct: 75 PQQRLALEAAWEALEDAGLDPASLRGSDRTGVFVGSGSG---DYAELQALDSAGGPRRVS 131
Query: 73 PFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAA-RMIQFGDSDVMVAGG 131
P+ + ++A+G +S + G +GP+ TAC++ AA R I+ G+ D+ +AGG
Sbjct: 132 PYLTGAWMPSVAAGRISYRLGLRGPSVTVDTACSSS-LVALHAAVRSIRRGECDLALAGG 190
Query: 132 TESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHA 189
E+ + AGF + AL + P +A PF DGFV GEG G ++L+EL A
Sbjct: 191 VEAPLTPGGFAGFSAAGALLSPDG--PCKAFDPFA---DGFVRGEGVGAVLLKELSEA 243
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains most of the structures involved in dimer formation and also the active site cysteine. Length = 243 |
| >gnl|CDD|217236 pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase, C-terminal domain | Back alignment and domain information |
|---|
Score = 142 bits (361), Expect = 4e-42
Identities = 54/118 (45%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Query: 197 YAEVRGYGMSGD-AHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT 255
YA +RG ++ D A H +G A+ AL +GL VDYV AH T TPLGD
Sbjct: 1 YAVIRGSAVNQDGAAHNGLTAPNGPAQARAIRAALADAGLDPEDVDYVEAHGTGTPLGDP 60
Query: 256 VEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNL 313
+EA A++ VF S L S K IGHL AAG I AVLA+ HGV P TLNL
Sbjct: 61 IEAEALKAVFGPGRDSQPLPVGSVKSNIGHLEAAAGVAGLIKAVLALRHGVIPPTLNL 118
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 119 |
| >gnl|CDD|234022 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Score = 149 bits (376), Expect = 2e-39
Identities = 112/369 (30%), Positives = 168/369 (45%), Gaps = 48/369 (13%)
Query: 18 ALCAADEALHDAKWLPSDQGQKERTGVSIG-GGIGSISDTVDA----------------- 59
+L A E L+DA LP +++ G+++G GG S +++A
Sbjct: 97 SLVVAKEVLNDAG-LPDGY-DRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVE 154
Query: 60 ---AQMICEKRLRRLSPF---FIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIG 113
++M+ +K + + P L N+ SG ++ ++ G N ACA +I
Sbjct: 155 DEDSEMLIKKFQDQYIHWEENSFPGSLGNVISGRIANRFDLGGMNCVVDAACAGSLAAIR 214
Query: 114 DAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFV 173
A + G S++M+ GG + F K+ A TT E +PFD G +
Sbjct: 215 MALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTT------NEDIQPFDIDSKGMM 268
Query: 174 IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH--HITQPHIDGKGAILAMTRALK 231
IGEG G++ L+ LE A++ G +IYA ++G G S D I P +G+ A+ RA
Sbjct: 269 IGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQAK--ALKRAYD 326
Query: 232 QSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFS-DHATSGSLAFSSTKGAIGHLLGAA 290
+G H + AH T T GD E + +VFS D+ +A S K IGH A
Sbjct: 327 DAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTA 386
Query: 291 GAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMP----------LTASKDMPISAALS 340
G I AVLA+HH V P T+N+ +P+P + P + P A +S
Sbjct: 387 GTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGIS 446
Query: 341 NSFGFGGTN 349
SFGFGGTN
Sbjct: 447 -SFGFGGTN 454
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. Length = 2582 |
| >gnl|CDD|238428 cd00832, CLF, Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Score = 135 bits (343), Expect = 2e-36
Identities = 101/347 (29%), Positives = 155/347 (44%), Gaps = 24/347 (6%)
Query: 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLS 72
R AL AAD AL DA P+ + GV G Q + K R +S
Sbjct: 70 RMTRLALAAADWALADAGVDPAALPPYDM-GVVTASAAGGFEFGQRELQKLWSKGPRHVS 128
Query: 73 PFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGT 132
+ + +G +S+++G +GP+ V A G ++ A R+++ G + ++V+GG
Sbjct: 129 AYQSFAWFYAVNTGQISIRHGMRGPSGVVVAEQAGGLDALAQARRLVRRG-TPLVVSGGV 187
Query: 133 ESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKR 192
+S++ S L+T + P A PFD G+V GEG +LVLE+ A++R
Sbjct: 188 DSALCPWGWVAQLSSGRLST--SDDPARAYLPFDAAAAGYVPGEGGAILVLEDAAAARER 245
Query: 193 GAKIYAEVRGYGMSGDAHHITQPHIDGKGAIL--AMTRALKQSGLQSHQVDYVNAHATST 250
GA++Y E+ GY + D P G+ L A+ AL +GL VD V A A
Sbjct: 246 GARVYGEIAGYAATFDP-----PPGSGRPPGLARAIRLALADAGLTPEDVDVVFADAAGV 300
Query: 251 PLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLT 310
P D EA A+ VF + ++ K G L ++ A+LA+ GV P T
Sbjct: 301 PELDRAEAAALAAVFG----PRGVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVIPPT 356
Query: 311 LNLAKPDPIFNDNFMPLTASKDMPISAALSNSF----GFGGTNASLL 353
+N+ P + L P AAL + G GG N++L+
Sbjct: 357 VNVTDVPPAY-----GLDLVTGRPRPAALRTALVLARGRGGFNSALV 398
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. Length = 399 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 5e-30
Identities = 76/272 (27%), Positives = 109/272 (40%), Gaps = 66/272 (24%)
Query: 84 ASGHVSMKYGFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA 142
A+G ++ G GP ++ ACATG ++ A + +Q G +D+++AGG+E
Sbjct: 46 AAGQLAYHLGISGGPAYSVNQACATGLTALALAVQQVQNGKADIVLAGGSEE-------- 97
Query: 143 GFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRG 202
FV G+G+ V+E EHA +RGA AE+
Sbjct: 98 -----------------------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVS 128
Query: 203 YGMSGD-AHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAI 261
+ D A + G+G A +AL+ +GL +DYV AH T TP+GD VE
Sbjct: 129 TAATFDGASMVPAV--SGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALG 186
Query: 262 RTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFN 321
S A S+T GH LGAAG +L + H P T
Sbjct: 187 LDPDGVR----SPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPT----------- 231
Query: 322 DNFMPLTASKDMPISAALSNSFGFGGTNASLL 353
L FG GGTNA+++
Sbjct: 232 ----------PREPRTVLLLGFGLGGTNAAVV 253
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|214836 smart00825, PKS_KS, Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Score = 98.2 bits (246), Expect = 2e-23
Identities = 70/261 (26%), Positives = 103/261 (39%), Gaps = 70/261 (26%)
Query: 103 TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 162
TAC++ ++ A + ++ G+ D+ +AGG + + G ++ L+ P
Sbjct: 95 TACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGLSRAGMLS------PDGRC 148
Query: 163 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGM--SGDAHHITQPHIDGK 220
+ FD DG+V GEG GV+VL+ L A + G I A +RG + G ++ IT P +
Sbjct: 149 KTFDASADGYVRGEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGITAPSGPAQ 208
Query: 221 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTK 280
I GS+ K
Sbjct: 209 LLI------------------------------------------------GSV-----K 215
Query: 281 GAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI---FNDNFMPLT-----ASKD 332
IGHL AAG I VLA+ HGV P TL+ P+P T
Sbjct: 216 SNIGHLEAAAGVAGLIKVVLALKHGVIPPTLHFETPNPHIDLEESPLRVPTELTPWPPPG 275
Query: 333 MPISAALSNSFGFGGTNASLL 353
P A + +SFGFGGTNA ++
Sbjct: 276 RPRRAGV-SSFGFGGTNAHVI 295
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 298 |
| >gnl|CDD|235715 PRK06147, PRK06147, 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 1e-06
Identities = 28/139 (20%), Positives = 54/139 (38%), Gaps = 20/139 (14%)
Query: 108 GAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC 167
GA ++ A R+I G ++ G +S + ++A + L T N
Sbjct: 136 GAVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNS----------- 184
Query: 168 GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPH---IDGKGAIL 224
+GF+ GE + ++L + G + G G+ + + + + G G
Sbjct: 185 --NGFIPGEAAAAVLLGRPAGGEAPGLPLL----GLGLGREPAPVGESEDLPLRGDGLTQ 238
Query: 225 AMTRALKQSGLQSHQVDYV 243
A+ AL ++G +DY
Sbjct: 239 AIRAALAEAGCGLEDMDYR 257
|
Length = 348 |
| >gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Score = 47.1 bits (113), Expect = 7e-06
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 104 ACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 163
C +G ++ AA+ I G++DV+VAGG ES +S A + +A G
Sbjct: 83 VCGSGLQAVALAAQSIAAGEADVVVAGGVES----MSRAPYLLPKARRGGRLGLNTLDGM 138
Query: 164 PFDCGRDGFV 173
D D F
Sbjct: 139 LDDGLTDPFT 148
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 386 |
| >gnl|CDD|235819 PRK06519, PRK06519, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 7e-05
Identities = 36/142 (25%), Positives = 52/142 (36%), Gaps = 19/142 (13%)
Query: 166 DCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILA 225
GF++G G LVLE EHA+ RGA+ YA + G + L
Sbjct: 233 GEDGGGFILGSGGAFLVLESREHAEARGARPYARISG---------VESDRARRAPGDLE 283
Query: 226 --MTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAI 283
+ R LK +G + V + AT ATA + A +G
Sbjct: 284 ASLERLLKPAGGLA-APTAVISGATGAH-----PATAEEKAALEAALAG--PVRGIGTLF 335
Query: 284 GHLLGAAGAVEAIFAVLAIHHG 305
GH + A + A L++ G
Sbjct: 336 GHTMEAQFPLGLALAALSVSKG 357
|
Length = 398 |
| >gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 42.4 bits (101), Expect = 2e-04
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 105 CATGAHSIGDAARMIQFGDSDVMVAGGTES 134
C +G ++ AA+ I+ GD+D++VAGG ES
Sbjct: 88 CGSGLKAVALAAQAIRAGDADIVVAGGQES 117
|
Length = 393 |
| >gnl|CDD|181625 PRK09051, PRK09051, beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 29/138 (21%)
Query: 174 IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQS 233
I +G+ +VL E + A+ RG K A + GY +G P G G + A +AL+++
Sbjct: 251 INDGAAAVVLAEADAAEARGLKPLARLVGYAHAG-----VDPEYMGIGPVPATQKALERA 305
Query: 234 GLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTK-----GAI--GHL 286
GL +D + A+ EA A + A + L K I GH
Sbjct: 306 GLTVADLDVIEAN----------EAFAAQAC----AVTRELGLDPAKVNPNGSGISLGHP 351
Query: 287 LGAAGAVEAIFAVLAIHH 304
+GA G AI V A++
Sbjct: 352 VGATG---AIITVKALYE 366
|
Length = 394 |
| >gnl|CDD|180563 PRK06445, PRK06445, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 4e-04
Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 22/121 (18%)
Query: 177 GSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQ 236
G+ ++L + KK G K A++R +G +G P I GKG + A +AL+++GL
Sbjct: 254 GASYVLLMSKKAVKKYGLKPMAKIRSFGFAG-----VPPAIMGKGPVPASKKALEKAGLS 308
Query: 237 SHQVDY--VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKG---AIGHLLGAAG 291
+D +N EA A+ +++ + KG AIGH LGA G
Sbjct: 309 VKDIDLWEIN------------EAFAVVVLYAIKELGLDPETVNIKGGAIAIGHPLGATG 356
Query: 292 A 292
A
Sbjct: 357 A 357
|
Length = 394 |
| >gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Score = 40.9 bits (97), Expect = 6e-04
Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 27/122 (22%)
Query: 178 SGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQS 237
+ VL++ E E AK+ G K A + GY ++G P I G G + A+ +ALK++GL
Sbjct: 249 AAVLLMSE-EKAKELGLKPLARIVGYAVAGVD-----PAIMGIGPVPAIPKALKRAGLTL 302
Query: 238 HQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTK-----GAI--GHLLGAA 290
+D + + EA A + + L K GAI GH LGA+
Sbjct: 303 DDIDLIEIN----------EAFAAQALACLKE----LGLDPEKVNVNGGAIALGHPLGAS 348
Query: 291 GA 292
GA
Sbjct: 349 GA 350
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 386 |
| >gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 6e-04
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 105 CATGAHSIGDAARMIQFGDSDVMVAGGTES 134
CA+G ++ AA I+ G++DVM+A G ES
Sbjct: 95 CASGLQAVAMAADRIRVGEADVMIAAGVES 124
|
Length = 399 |
| >gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 9e-04
Identities = 15/32 (46%), Positives = 24/32 (75%)
Query: 104 ACATGAHSIGDAARMIQFGDSDVMVAGGTESS 135
CA+G ++ AA++I+ G++DV+VAGG ES
Sbjct: 82 QCASGLQAVILAAQLIRAGEADVVVAGGVESM 113
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatty acid oxidation [Fatty acid and phospholipid metabolism, Other]. Length = 386 |
| >gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.001
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 104 ACATGAHSIGDAARMIQFGDSDVMVAGGTES 134
C +G ++ AA+ I+ GD+D++VAGG ES
Sbjct: 85 VCGSGLKAVALAAQAIRAGDADIVVAGGVES 115
|
Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 262 |
| >gnl|CDD|215347 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.001
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 30/128 (23%)
Query: 174 IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQS 233
I +G+ LVL E A + G ++ A++RGY DA P + LA+ +ALK +
Sbjct: 250 ISDGAAALVLVSGEKALELGLQVIAKIRGY---ADAAQ--APELFTTAPALAIPKALKHA 304
Query: 234 GLQSHQVDY--VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTK-----GA--IG 284
GL++ QVDY +N EA ++ + A L K GA +G
Sbjct: 305 GLEASQVDYYEIN------------EAFSVVAL----ANQKLLGLDPEKVNVHGGAVSLG 348
Query: 285 HLLGAAGA 292
H +G +GA
Sbjct: 349 HPIGCSGA 356
|
Length = 394 |
| >gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.004
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 104 ACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDA 138
ACA+G ++ AA+ I G++DV++AGG E DA
Sbjct: 91 ACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDA 125
|
Length = 392 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 358 | |||
| KOG1394 | 440 | consensus 3-oxoacyl-(acyl-carrier-protein) synthas | 100.0 | |
| PRK14691 | 342 | 3-oxoacyl-(acyl carrier protein) synthase II; Prov | 100.0 | |
| COG0304 | 412 | FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li | 100.0 | |
| PRK08722 | 414 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PLN02787 | 540 | 3-oxoacyl-[acyl-carrier-protein] synthase II | 100.0 | |
| PRK06333 | 424 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK07910 | 418 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PLN02836 | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase | 100.0 | |
| cd00832 | 399 | CLF Chain-length factor (CLF) is a factor required | 100.0 | |
| PRK07314 | 411 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK07967 | 406 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 100.0 | |
| PTZ00050 | 421 | 3-oxoacyl-acyl carrier protein synthase; Provision | 100.0 | |
| PRK09116 | 405 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK08439 | 406 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| TIGR03150 | 407 | fabF beta-ketoacyl-acyl-carrier-protein synthase I | 100.0 | |
| cd00834 | 406 | KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) | 100.0 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 100.0 | |
| PRK05952 | 381 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| cd00828 | 407 | elong_cond_enzymes "elongating" condensing enzymes | 100.0 | |
| COG3321 | 1061 | Polyketide synthase modules and related proteins [ | 100.0 | |
| PRK07103 | 410 | polyketide beta-ketoacyl:acyl carrier protein synt | 100.0 | |
| PRK06501 | 425 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| smart00825 | 424 | PKS_KS Beta-ketoacyl synthase. The structure of be | 100.0 | |
| cd00833 | 421 | PKS polyketide synthases (PKSs) polymerize simple | 100.0 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 100.0 | |
| PRK06519 | 398 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 100.0 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 100.0 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 100.0 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 100.0 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.97 | |
| PRK06064 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.97 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.97 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 99.96 | |
| PF00109 | 254 | ketoacyl-synt: Beta-ketoacyl synthase, N-terminal | 99.96 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.96 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 99.96 | |
| PRK07516 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.96 | |
| TIGR02430 | 400 | pcaF beta-ketoadipyl CoA thiolase. Members of this | 99.96 | |
| PRK08131 | 401 | acetyl-CoA acetyltransferase; Provisional | 99.96 | |
| PRK13359 | 400 | beta-ketoadipyl CoA thiolase; Provisional | 99.96 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 99.96 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.96 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 99.96 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 99.96 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 99.96 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 99.96 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.96 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 99.96 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 99.96 | |
| PRK06158 | 384 | thiolase; Provisional | 99.95 | |
| PRK09050 | 401 | beta-ketoadipyl CoA thiolase; Validated | 99.95 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 99.95 | |
| PRK07661 | 391 | acetyl-CoA acetyltransferase; Provisional | 99.95 | |
| PRK07850 | 387 | acetyl-CoA acetyltransferase; Provisional | 99.95 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 99.95 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.95 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 99.95 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 99.95 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 99.95 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 99.95 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 99.95 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.95 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.95 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 99.95 | |
| PRK06289 | 403 | acetyl-CoA acetyltransferase; Provisional | 99.95 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 99.95 | |
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 99.94 | |
| PRK06445 | 394 | acetyl-CoA acetyltransferase; Provisional | 99.94 | |
| PRK08947 | 387 | fadA 3-ketoacyl-CoA thiolase; Reviewed | 99.94 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 99.94 | |
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.94 | |
| TIGR02445 | 385 | fadA fatty oxidation complex, beta subunit FadA. T | 99.94 | |
| PRK06504 | 390 | acetyl-CoA acetyltransferase; Provisional | 99.94 | |
| TIGR02446 | 430 | FadI fatty oxidation complex, beta subunit FadI. T | 99.94 | |
| PRK07801 | 382 | acetyl-CoA acetyltransferase; Provisional | 99.94 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 99.94 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 99.93 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 99.93 | |
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 99.92 | |
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 99.91 | |
| KOG1390 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 99.91 | |
| KOG1406 | 408 | consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 | 99.9 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 99.9 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.9 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 99.89 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 99.89 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 99.89 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.86 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.84 | |
| KOG1391 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 99.83 | |
| KOG1389 | 435 | consensus 3-oxoacyl CoA thiolase [Lipid transport | 99.83 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.82 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.82 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 99.82 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 99.81 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.8 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 99.78 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 99.76 | |
| PRK06840 | 339 | hypothetical protein; Validated | 99.75 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.74 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 99.73 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 99.72 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 99.72 | |
| KOG1392 | 465 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 99.69 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 99.68 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.67 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 99.65 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 99.63 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 99.62 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 99.62 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 99.6 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 99.56 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 99.56 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 99.54 | |
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 99.54 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 99.51 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 99.51 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 99.5 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 99.43 | |
| COG3425 | 377 | PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi | 99.4 | |
| PLN02577 | 459 | hydroxymethylglutaryl-CoA synthase | 99.38 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 99.37 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 99.35 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 99.29 | |
| TIGR01833 | 454 | HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth | 99.2 | |
| PF13723 | 218 | Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina | 99.16 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 99.15 | |
| PF00108 | 264 | Thiolase_N: Thiolase, N-terminal domain; InterPro: | 99.13 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 98.88 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 98.85 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 98.81 | |
| PF08545 | 80 | ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) | 98.64 | |
| PF07451 | 329 | SpoVAD: Stage V sporulation protein AD (SpoVAD); I | 98.38 | |
| PF01154 | 174 | HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s | 97.86 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 97.31 | |
| KOG1393 | 462 | consensus Hydroxymethylglutaryl-CoA synthase [Lipi | 92.03 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 90.56 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 89.7 | |
| PRK06158 | 384 | thiolase; Provisional | 88.75 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 88.56 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 87.12 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 86.95 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 86.36 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 86.22 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 85.69 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 85.16 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 84.26 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 84.19 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 84.17 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 83.95 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 83.87 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 83.67 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 83.64 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 83.63 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 83.37 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 83.3 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 83.0 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 82.35 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 82.12 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 81.23 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 81.13 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 80.61 | |
| KOG2708 | 336 | consensus Predicted metalloprotease with chaperone | 80.25 |
| >KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-74 Score=502.58 Aligned_cols=353 Identities=61% Similarity=0.953 Sum_probs=332.6
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCCCCC--CCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKWLPS--DQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRIL 80 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~--~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (358)
.++...|+|+++.+|++.|+++||+|+||.+. +..+.+++||.+|+.++++..+......+.+.+.++++|+++|..+
T Consensus 83 ~s~~~~r~ms~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil 162 (440)
T KOG1394|consen 83 VSKGDERRMSKFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKIL 162 (440)
T ss_pred cchhhhhhhhHHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhh
Confidence 35678899999999999999999999999876 3335789999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCC
Q 018323 81 INMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 160 (358)
Q Consensus 81 ~~~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~ 160 (358)
.|+.+++|+..+||+||++.++++|++|..+|..|.+.|+.|++|++|+||+|...+|....+|.+.+.|+++ +++|..
T Consensus 163 ~NM~ag~vsm~~gl~GpnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~-nd~P~~ 241 (440)
T KOG1394|consen 163 TNMAAGYVSMKYGLRGPNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTR-NDNPQK 241 (440)
T ss_pred cccccchhhhhhcCcCCchhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhc-CCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999987 788999
Q ss_pred CCCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 018323 161 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQV 240 (358)
Q Consensus 161 ~~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~di 240 (358)
.+||||..++||+.|||++++|||+.|+|+++|++||+++.|++.++|..|++.|++++.+...+|+++|++|||.|+||
T Consensus 242 aSRPfD~~RdGFVmGEGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~pe~i 321 (440)
T KOG1394|consen 242 ASRPFDKKRDGFVMGEGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGLSPEDI 321 (440)
T ss_pred cCCCCccCCCceeeccceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcCCChhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Q 018323 241 DYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF 320 (358)
Q Consensus 241 d~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~ 320 (358)
|||++|+|+|+.+|.+|..|++++|+.... ..+|+++|+.+||.+||+|.++-+..+++++++.+||++|++.|++.+
T Consensus 322 ~YvNAHATST~~GD~aE~~Ai~~vf~~~~~--~~~vsStKgaiGHLLGAAGavEAi~Tv~ai~~~~lpptlNlen~d~~~ 399 (440)
T KOG1394|consen 322 DYVNAHATSTPLGDAAEAEAIKRVFGEHNI--ASKVSSTKGAIGHLLGAAGAVEAIFTVLAINDGVLPPTLNLENPDPGV 399 (440)
T ss_pred CeeecccccCcCchHHHHHHHHHHhccCCc--ccccccccchhhhhcccccchhhHhhhhhhhcCccCCcccccCCCccc
Confidence 999999999999999999999999998652 348999999999999999999999999999999999999999999999
Q ss_pred CCCCCccc--cCCC-CCCcEEEeeccccccceeeeEeeecC
Q 018323 321 NDNFMPLT--ASKD-MPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 321 ~~~~~~~~--~~~~-~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
+.+++|+. ++.. .+.+++|.|||||||+|+++++.+|+
T Consensus 400 d~~~~~~~~~~~~~~~~~~valsNSFGFGGtNaSl~fa~~~ 440 (440)
T KOG1394|consen 400 DLDYVPLKASEKKGGNKVRVALSNSFGFGGTNASLCFAKFK 440 (440)
T ss_pred cccccccccccccccccceEEEecccccCCcchhheeeecC
Confidence 98876642 2222 45889999999999999999999874
|
|
| >PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-69 Score=497.79 Aligned_cols=339 Identities=49% Similarity=0.781 Sum_probs=317.6
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHH
Q 018323 11 IARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM 90 (358)
Q Consensus 11 ~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 90 (358)
|++.+++++.++++||+|||+.. +.+|+||++|++.++...++++++.+.+++...++|+.++.+++|+++++|++
T Consensus 1 ~~~~~~~~~~a~~~a~~~a~~~~----~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~ 76 (342)
T PRK14691 1 MGRWWRYKWITFHPSLTHADNTE----KQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSI 76 (342)
T ss_pred CCHHHHHHHHHHHHHHHhCCCCC----CcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHH
Confidence 57899999999999999999862 46799999999999999999988888888888999999999999999999999
Q ss_pred HcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCC
Q 018323 91 KYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 170 (358)
Q Consensus 91 ~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 170 (358)
.||++||+++++++|+|++.||..|+++|+.|++|++||+|+|...++..+..|...+.++.....+|+..|||||++++
T Consensus 77 ~~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~ 156 (342)
T PRK14691 77 KHHFKGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARD 156 (342)
T ss_pred HhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999998889999998886555668889999999999
Q ss_pred ceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q 018323 171 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATST 250 (358)
Q Consensus 171 g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt 250 (358)
|+++|||++++||++++.|+++|.+++++|+|++.++++.+...|.+++.+..++++++|+++||+|+||||||+|||||
T Consensus 157 G~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT 236 (342)
T PRK14691 157 GFVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHATST 236 (342)
T ss_pred CccccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCCCC
Confidence 99999999999999999999999999999999999999988887888889999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCC-CCCCCcccc
Q 018323 251 PLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF-NDNFMPLTA 329 (358)
Q Consensus 251 ~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~-~~~~~~~~~ 329 (358)
+.+|..|..+++++|+.. ..+||+++|+++||+++|+|+++++.++++|+++.|||++|+++|+|++ ++++++ .+
T Consensus 237 ~~~D~~E~~Ai~~~fg~~---~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ippt~n~~~~d~~~~~~~~v~-~~ 312 (342)
T PRK14691 237 PVGDLGEINAIKHLFGES---NALAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGLNIIA-GN 312 (342)
T ss_pred cCCCHHHHHHHHHHhCCC---CCceEECCcccccCCcchhhHHHHHHHHHHHhCCccCCcCCCCCCCccccccCccc-CC
Confidence 999999999999999863 3589999999999999999999999999999999999999999999998 488877 55
Q ss_pred CCCCCCcEEEeeccccccceeeeEeeec
Q 018323 330 SKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 330 ~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
.++.+.+++|+|+|||||+|+++||++|
T Consensus 313 ~~~~~~~~al~nsfgfGG~n~~lvl~~~ 340 (342)
T PRK14691 313 AQPHDMTYALSNGFGFAGVNASILLKRW 340 (342)
T ss_pred CccCCCCEEEEeCccCCCeeEEEEEeec
Confidence 5666789999999999999999999987
|
|
| >COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-69 Score=501.81 Aligned_cols=350 Identities=53% Similarity=0.830 Sum_probs=325.7
Q ss_pred cchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccC-CCCcchhhhhhh
Q 018323 4 RGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRR-LSPFFIPRILIN 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 82 (358)
++++.|+||+.++|++.|+.+||+|||++.+...+. |+|+++|++.++...++.....+..++.+. ++|+.++..++|
T Consensus 61 ~~~~~~~~d~~~~~a~~Aa~eAl~dAgl~~~~~~~~-r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 139 (412)
T COG0304 61 AKKERRFMDRFSQLAVVAAVEALEDAGLDNELNVDM-RVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPN 139 (412)
T ss_pred chHHhhcccHHHHHHHHHHHHHHHHcCCCcccccCc-cEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccc
Confidence 566777999999999999999999999984332223 999999999999988876555555556555 899999999999
Q ss_pred HHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCC
Q 018323 83 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 162 (358)
Q Consensus 83 ~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 162 (358)
+.++.++..+|++||++++.++|+++..||..|+++|+.|++|++|+||+|...++....+|..+++++.. +++|...|
T Consensus 140 ~~a~~vs~~~g~~G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~-nd~p~~as 218 (412)
T COG0304 140 LAAGNVAIVFGLKGPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTR-NDDPEKAS 218 (412)
T ss_pred hHHHHHHHHhCCCCCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccC-CCCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988 78899999
Q ss_pred CCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 018323 163 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDY 242 (358)
Q Consensus 163 ~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~ 242 (358)
||||++++||++|||++++|||+.++|++||++||++|.|++.++|++|.+.|.+++.+..++|+.||+++|++|+||||
T Consensus 219 rPfd~~RdGfv~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~~~~idY 298 (412)
T COG0304 219 RPFDKNRDGFVIGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPEDIDY 298 (412)
T ss_pred CCCCCCCCCEEEecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCCHhHCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCC-CC
Q 018323 243 VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI-FN 321 (358)
Q Consensus 243 i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~-~~ 321 (358)
|+.|||+|+.+|..|..+++++|+... ..++++++|+++||+++|+|..+.+.++++|+++.+||++|+++|+|+ ++
T Consensus 299 inaHgTsT~~nD~~E~~ai~~vfg~~~--~~~~vsstKs~tGH~lGAaGaveai~~~l~l~~g~ippt~n~~~~dp~~~~ 376 (412)
T COG0304 299 INAHGTSTPANDKAESLAIKRVFGEHA--KSLPVSSTKSLTGHTLGAAGAVEAIISLLALRDGIIPPTINLDNPDPEAAD 376 (412)
T ss_pred EeCCCccCCCccHHHHHHHHHHhcccc--cCceeeecccccccChhhHHHHHHHHHHHHHhcCCcCCCCCcCCCCccccc
Confidence 999999999999999999999999765 348999999999999999999999999999999999999999999997 67
Q ss_pred CCCCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 322 DNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 322 ~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
+++++ +..+....+++|+|||||||+|+++++++|+
T Consensus 377 l~~v~-~~~~~~~~~~~lsnsfGFGG~Na~lv~~~~~ 412 (412)
T COG0304 377 LDVVP-NEARTGAVRAALSNSFGFGGTNASLVFKRYQ 412 (412)
T ss_pred ccccC-CcccccceeEEEecccccCCcceEEEEecCC
Confidence 88888 5556555999999999999999999999985
|
|
| >PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-68 Score=505.91 Aligned_cols=351 Identities=47% Similarity=0.795 Sum_probs=323.9
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 82 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (358)
+++++.|+||+++++++.++++||+|||+++++. +..|+||++|++.+++...+.+++.+.++++..++|+.++..++|
T Consensus 63 ~~~~~~~~~d~~~~~~l~a~~~Al~dAGl~~~~~-~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 141 (414)
T PRK08722 63 MSKKDARKMDLFIQYGIAAGIQALDDSGLEVTEE-NAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVN 141 (414)
T ss_pred CCHHHHhhcCHHHHHHHHHHHHHHHHcCCCcccc-CCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhccccccc
Confidence 4567789999999999999999999999987655 478999999999999988888888888888888999999999999
Q ss_pred HHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCC
Q 018323 83 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 162 (358)
Q Consensus 83 ~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 162 (358)
.++++|++.||++||+++++++|+|++.||..|+++|++|++|++||+|+|...++..+..|...+.++.. +.+|+..|
T Consensus 142 ~~a~~is~~~gl~Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~-~~~p~~~~ 220 (414)
T PRK08722 142 MIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTR-NDEPQKAS 220 (414)
T ss_pred HHHHHHHHHhCCCCCccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccC-CCCCcccc
Confidence 99999999999999999999999999999999999999999999999999998899989999988888643 34567899
Q ss_pred CCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 018323 163 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDY 242 (358)
Q Consensus 163 ~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~ 242 (358)
||||.+++|+++|||++++||++++.|+++|.++|++|+|++.++|+.+...|++.+.+..++++++|+++|++|+||||
T Consensus 221 rpfd~~~~G~~~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~did~ 300 (414)
T PRK08722 221 RPWDKDRDGFVLGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGY 300 (414)
T ss_pred CcCcCCCCceEeeceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHcCE
Confidence 99999999999999999999999999999999999999999999999988888888888899999999999999999999
Q ss_pred EEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 018323 243 VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFND 322 (358)
Q Consensus 243 i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~ 322 (358)
||+|||||+.+|.+|..+++++|+... ..++|++++|+++||+++|+|++++++++++|++++|||++|+++|+|.+++
T Consensus 301 ie~hgtgt~~~D~~E~~al~~~fg~~~-~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~ 379 (414)
T PRK08722 301 VNAHGTSTPAGDVAEIKGIKRALGEAG-SKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDI 379 (414)
T ss_pred EEccCccCCCCCHHHHHHHHHHhcccC-CCCceeeCcccccccchHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCc
Confidence 999999999999999999999998642 2358999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCC-CCCcEEEeeccccccceeeeEeeec
Q 018323 323 NFMPLTASKD-MPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 323 ~~~~~~~~~~-~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
++++ ...+. .+.+++++|+|||||+|+|+||++.
T Consensus 380 ~~v~-~~~~~~~~~~~~l~nsfGfGG~n~~lvl~~~ 414 (414)
T PRK08722 380 DLVP-HTARKVESMEYAICNSFGFGGTNGSLIFKKM 414 (414)
T ss_pred ccCC-CccccCCCCCEEEEecccCCCceEEEEEecC
Confidence 9887 44444 3689999999999999999999873
|
|
| >PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-68 Score=512.61 Aligned_cols=350 Identities=44% Similarity=0.692 Sum_probs=320.0
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCCCCC---CCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKWLPS---DQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRI 79 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~---~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (358)
.++++.++||+++++++.++++||+|||++++ ++ ++.++||++|+..++...+.+.++.+. .....++|+.++..
T Consensus 188 l~~k~~r~md~~~~~al~Aa~eAL~dAGl~~~~~~~~-~~~r~GV~vGt~~g~~~~~~~~~~~l~-~~~~~~~p~~~~~~ 265 (540)
T PLN02787 188 VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMKEL-DKTKCGVLIGSAMGGMKVFNDAIEALR-ISYRKMNPFCVPFA 265 (540)
T ss_pred CCHHHHHhCCHHHHHHHHHHHHHHHHcCCCccccccc-CCCceEEEEEeccchHHHHHHHHHHHh-hccccCCcchhhhh
Confidence 45678899999999999999999999999764 33 478999999999998877777666554 45667889989999
Q ss_pred hhhHHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCC
Q 018323 80 LINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQ 159 (358)
Q Consensus 80 ~~~~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~ 159 (358)
+.|+.+++|+..||++||+++|+++|+|++.||..|+++|++|++|++||+|+|..+.|..+..|...+.++.. ..+|+
T Consensus 266 ~~n~~a~~ia~~~gl~Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~-~~~p~ 344 (540)
T PLN02787 266 TTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQR-NDDPT 344 (540)
T ss_pred cccHHHHHHHHHhCCCCCccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhcc-CCCcc
Confidence 99999999999999999999999999999999999999999999999999999998999999999999888754 44577
Q ss_pred CCCCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 018323 160 EASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQ 239 (358)
Q Consensus 160 ~~~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~d 239 (358)
..|||||.+++||++|||++++|||++++|+++|++||++|+|++.++|+.|.+.|++++.++.++|++||+++|++|+|
T Consensus 345 ~~~rPFD~~rdGfv~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~d 424 (540)
T PLN02787 345 KASRPWDMNRDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKED 424 (540)
T ss_pred cccCCcccCCCCcccccceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Q 018323 240 VDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 319 (358)
Q Consensus 240 id~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~ 319 (358)
||||++|||||+.+|..|..++.++|+.. ..+||+++|+++||+++|+|++++++++++|++|.|||++|+++|+|.
T Consensus 425 IdyInaHGTGT~~gD~~E~~Ai~~~Fg~~---~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~pd~~ 501 (540)
T PLN02787 425 VNYINAHATSTKAGDLKEYQALMRCFGQN---PELRVNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESG 501 (540)
T ss_pred CcEEEccCccCCCCCHHHHHHHHHHhCCC---CCceeeCCCCCcCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCCCcc
Confidence 99999999999999999999999999853 358999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 320 FNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
++++++.....+..+.+++|+|+|||||+|+++||++|+
T Consensus 502 ~~~~~~v~~~~~~~~ir~aL~nSfGFGG~Naslvl~~~~ 540 (540)
T PLN02787 502 VDTKVLVGPKKERLDIKVALSNSFGFGGHNSSILFAPYK 540 (540)
T ss_pred CCcccccccccccCCcCEEEEeeecCCceeEEEEEEeCC
Confidence 998875423445557899999999999999999999985
|
|
| >PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-67 Score=503.57 Aligned_cols=352 Identities=52% Similarity=0.827 Sum_probs=328.7
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 82 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (358)
+++++.++|||+++|++.++++||+|||++++++.+..++||++|++.+.+..+.+..+.+.+.+...++|+.++.++.|
T Consensus 71 i~~~~~~~~d~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (424)
T PRK06333 71 LDPKDQRKMDRFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTN 150 (424)
T ss_pred CCHHHHhhcCHHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhh
Confidence 46778899999999999999999999999887664578999999999999988888888888888888999999999999
Q ss_pred HHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCC
Q 018323 83 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 162 (358)
Q Consensus 83 ~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 162 (358)
.++++|++.||++||+++++++|+|++.||..|+++|++|++|++||+|+|.++++..+..|...+.++..+...|+..|
T Consensus 151 ~~a~~is~~~gl~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~ 230 (424)
T PRK06333 151 MAAGHVSIRYGFKGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQAS 230 (424)
T ss_pred HHHHHHHHHhCCCCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999998898888888888888876667788899
Q ss_pred CCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 018323 163 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDY 242 (358)
Q Consensus 163 ~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~ 242 (358)
+|||.+++|+++|||++++||++++.|+++|.++|++|+|++.++|+.+.+.|.+.+.++.+++++||+++|++|+||||
T Consensus 231 ~Pfd~~~~G~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~dId~ 310 (424)
T PRK06333 231 RPFDRDRDGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEEVQH 310 (424)
T ss_pred CCCCCCCCCeEEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCE
Confidence 99999999999999999999999999999999999999999999999888888888889999999999999999999999
Q ss_pred EEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCC-
Q 018323 243 VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFN- 321 (358)
Q Consensus 243 i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~- 321 (358)
||+|||||+.+|..|..+++++|+.. .++++++.|+++||+.+|+|++++++++++|++|+|||++|+++|+|.++
T Consensus 311 i~~hgtgt~~~D~~E~~al~~~fg~~---~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~~~~~~~ 387 (424)
T PRK06333 311 LNAHATSTPVGDLGEVAAIKKVFGHV---SGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAAEG 387 (424)
T ss_pred EeccCCCCccchHHHHHHHHHHhCCC---CCceeECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCccc
Confidence 99999999999999999999999843 46899999999999999999999999999999999999999999999998
Q ss_pred CCCCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 322 DNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 322 ~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
+++++ ...+.++.+++++|||||||+|+|+||++|+
T Consensus 388 ~~~~~-~~~~~~~~~~al~~s~gfGG~n~~~il~~~~ 423 (424)
T PRK06333 388 LDVVA-NKARPMDMDYALSNGFGFGGVNASILFRRWE 423 (424)
T ss_pred ccccc-CCCcccCcCEEEEeeecCCCeeEEEEEeccC
Confidence 77777 5667778899999999999999999999874
|
|
| >PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-67 Score=496.51 Aligned_cols=346 Identities=37% Similarity=0.576 Sum_probs=320.4
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 82 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (358)
+++++.|+|||++++++.++++||+|||++. . ++.|+||++|++.++......++..+.+.+...++|+.++.+++|
T Consensus 72 ~~~~~~~~~d~~~~~~l~aa~~AledAg~~~--~-~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 148 (418)
T PRK07910 72 LTRVELRRMSYLQRMSTVLGRRVWENAGSPE--V-DTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPN 148 (418)
T ss_pred CCHHHHhhccHHHHHHHHHHHHHHHHcCCCC--C-CcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccc
Confidence 3567889999999999999999999999842 3 478999999999999988888888888888888899999999999
Q ss_pred HHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcc-cccccCCCCCCC
Q 018323 83 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRA-LTTKYNGTPQEA 161 (358)
Q Consensus 83 ~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~-l~~~~~~~~~~~ 161 (358)
.++.+++..+|++||+++++++|+|++.||.+|+++|++|++|++||+|+|..+++..+..|..++. ++.. ...++..
T Consensus 149 ~~a~~is~~~~~~G~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~-~~~~~~~ 227 (418)
T PRK07910 149 GPAAAVGLERHAKAGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTN-NDDPAGA 227 (418)
T ss_pred cHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccC-CCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999899998889999888 6532 3447789
Q ss_pred CCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcc
Q 018323 162 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVD 241 (358)
Q Consensus 162 ~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did 241 (358)
|||||.+++|+++|||++++||++++.|+++|.++|++|+|++.++|+.+...|++.+.++.++++++|+++|++|+|||
T Consensus 228 ~rPFd~~~~G~v~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~did 307 (418)
T PRK07910 228 CRPFDKDRDGFVFGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDID 307 (418)
T ss_pred cCCCcCCCCCEeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHCC
Confidence 99999999999999999999999999999999999999999999999999888888888899999999999999999999
Q ss_pred EEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCC
Q 018323 242 YVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFN 321 (358)
Q Consensus 242 ~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~ 321 (358)
|||.|||||+.+|..|..+++++|+.. .++++++|+++||+++|+|++++++++++|++++|||++|+++|+|.++
T Consensus 308 ~ie~hgtgt~~~D~~E~~Al~~~fg~~----~~~v~s~K~~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~ 383 (418)
T PRK07910 308 HVNAHATGTSVGDVAEGKAINNALGGH----RPAVYAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEID 383 (418)
T ss_pred EEEcCCcCCCCCCHHHHHHHHHHhCCC----CCceeCccccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCC
Confidence 999999999999999999999999853 3579999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 322 DNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 322 ~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
+++++ .+++..+.+++++|||||||+|+++||+++
T Consensus 384 l~~~~-~~~~~~~~~~al~nsfGfGG~N~slvl~~~ 418 (418)
T PRK07910 384 LDVVA-GEPRPGNYRYAINNSFGFGGHNVALAFGRY 418 (418)
T ss_pred cccCC-CCCcCCCccEEEEeeecCCCeeEEEEEecC
Confidence 99887 455566789999999999999999999986
|
|
| >PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-66 Score=496.62 Aligned_cols=351 Identities=83% Similarity=1.272 Sum_probs=323.1
Q ss_pred hccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHH
Q 018323 8 LKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGH 87 (358)
Q Consensus 8 ~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 87 (358)
.|++++..+|++.|+++||+|||+++.+..+.+++||++|++.+.+..+..+...+.+++...++|+.++.++.|+++++
T Consensus 87 ~~~~~~~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~ 166 (437)
T PLN02836 87 SRSSSRFIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGH 166 (437)
T ss_pred ccccCHHHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHH
Confidence 56899999999999999999999976543346899999999998888887777777777778899999999999999999
Q ss_pred HHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcC
Q 018323 88 VSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC 167 (358)
Q Consensus 88 ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~ 167 (358)
|++.||++||+++|+++|+|++.||..|+++|++|++|++||+|+|...++..+..|...+.++..+..+++..++|||.
T Consensus 167 is~~~gl~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~ 246 (437)
T PLN02836 167 VSIRYGFQGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDC 246 (437)
T ss_pred HHHHhCCCCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCccc
Confidence 99999999999999999999999999999999999999999999999888888888888888876666667789999999
Q ss_pred CCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecC
Q 018323 168 GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHA 247 (358)
Q Consensus 168 ~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~ 247 (358)
.++|+++|||++++||++++.|+++|+++|++|+|++.++|+.+...|++......+++++||+++||+++||||||+||
T Consensus 247 ~~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~~dId~ve~hg 326 (437)
T PLN02836 247 DRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHPNQVDYVNAHA 326 (437)
T ss_pred CCCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCHhHcCEEEccC
Confidence 99999999999999999999999999999999999999999988888887888889999999999999999999999999
Q ss_pred CCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCcc
Q 018323 248 TSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPL 327 (358)
Q Consensus 248 ~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~ 327 (358)
|||+.+|..|..++.++|+.....+.++++++|+++||+++|+|++++++++++|++++|||++|+++|+|.+++++++.
T Consensus 327 tgt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~~~~~~~ 406 (437)
T PLN02836 327 TSTPLGDAVEARAIKTVFSEHATSGGLAFSSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDPIFDDGFVPL 406 (437)
T ss_pred CcCcCcCHHHHHHHHHHhcccccCCCCeeECCcccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCcc
Confidence 99999999999999999987654456899999999999999999999999999999999999999999999999988874
Q ss_pred ccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 328 TASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 328 ~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
...+..+.+.+|+|||||||+|+|+||++.+
T Consensus 407 ~~~~~~~~~~~l~nsfgfGG~na~lvl~~~~ 437 (437)
T PLN02836 407 TASKAMLIRAALSNSFGFGGTNASLLFTSPP 437 (437)
T ss_pred cCCCCCCccEEEEecccCCCeeEEEEEecCC
Confidence 4445567899999999999999999999875
|
|
| >cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-66 Score=487.11 Aligned_cols=340 Identities=29% Similarity=0.437 Sum_probs=314.7
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 82 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (358)
+|+++.|+||++++|++.++++||+|||++++.+ ++.|+||++|++.+++...+..+..+...+...++|+.++.++.+
T Consensus 60 ~~~~~~~~~d~~~~~~l~aa~eAl~dAGl~~~~~-~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (399)
T cd00832 60 LPGRLLPQTDRMTRLALAAADWALADAGVDPAAL-PPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYA 138 (399)
T ss_pred CCHHHHhhCCHHHHHHHHHHHHHHHHcCCCcccc-CCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhh
Confidence 5778889999999999999999999999987766 478999999999999888888888888878888899999999999
Q ss_pred HHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCC
Q 018323 83 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 162 (358)
Q Consensus 83 ~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 162 (358)
..+++|++.||++||+++++++|+|++.||.+|+++|++|+ |++||+|+|..++|..+..+...+.++. ...|...|
T Consensus 139 ~~a~~is~~~gl~Gp~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~--~~~p~~~~ 215 (399)
T cd00832 139 VNTGQISIRHGMRGPSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLST--SDDPARAY 215 (399)
T ss_pred HHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCC--CCCCCCCc
Confidence 99999999999999999999999999999999999999999 9999999999999999999988888864 23466799
Q ss_pred CCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 018323 163 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDY 242 (358)
Q Consensus 163 ~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~ 242 (358)
||||.+++|+++|||++++|||++++|+++|+++|++|.|++.++|+.+... ...++.++++++|+++|++|+||||
T Consensus 216 rPFd~~~~G~~~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~---~~~~~~~a~~~al~~ag~~~~~i~~ 292 (399)
T cd00832 216 LPFDAAAAGYVPGEGGAILVLEDAAAARERGARVYGEIAGYAATFDPPPGSG---RPPGLARAIRLALADAGLTPEDVDV 292 (399)
T ss_pred CCCcCCCCCEeeeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCCCCC---CHHHHHHHHHHHHHHcCCCHHHccE
Confidence 9999999999999999999999999999999999999999999999876532 4778999999999999999999999
Q ss_pred EEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 018323 243 VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFND 322 (358)
Q Consensus 243 i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~ 322 (358)
|++|||||+.+|..|..+++++|+.. .+|+++.|+++||+++|+|++++++++++|++++|||++|+++|+|++++
T Consensus 293 v~~hgtgt~~~D~~E~~al~~~fg~~----~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~~~ipp~~n~~~~~p~~~l 368 (399)
T cd00832 293 VFADAAGVPELDRAEAAALAAVFGPR----GVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVIPPTVNVTDVPPAYGL 368 (399)
T ss_pred EEeccCcCCCCCHHHHHHHHHHhCCC----CCceeCCCchhcchHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCc
Confidence 99999999999999999999999863 47999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCCCCcEEEeeccccccceeeeEe
Q 018323 323 NFMPLTASKDMPISAALSNSFGFGGTNASLLF 354 (358)
Q Consensus 323 ~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il 354 (358)
++++ .+.+..+.+++++|||||||+|+++||
T Consensus 369 ~~v~-~~~~~~~~~~al~nsfgfGG~na~lvl 399 (399)
T cd00832 369 DLVT-GRPRPAALRTALVLARGRGGFNSALVV 399 (399)
T ss_pred ccCC-CcccCCCCCEEEEeccCCCCcceEEEC
Confidence 9887 555666789999999999999999986
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. |
| >PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-66 Score=491.12 Aligned_cols=351 Identities=56% Similarity=0.912 Sum_probs=326.1
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 82 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (358)
+++++.++|||+++|+++++++||+|||+++++++ ..++||++|++.++....++++..+.+.+...++|+.++..+.|
T Consensus 61 ~~~~~~~~~~~~~~l~~~aa~~Al~dAGl~~~~~~-~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (411)
T PRK07314 61 MSRKEARRMDRFIQYGIAAAKQAVEDAGLEITEEN-ADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIIN 139 (411)
T ss_pred CCHHHhhcCCHHHHHHHHHHHHHHHHcCCCcccCC-cccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcch
Confidence 46788899999999999999999999999988774 88999999999999999999998888888888899999999999
Q ss_pred HHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCC
Q 018323 83 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 162 (358)
Q Consensus 83 ~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 162 (358)
..+++|++.||++||+++++++|+|++.||..|+++|++|++|++||+|+|..+++.....|...+.++.. ...|...+
T Consensus 140 ~~a~~is~~~gl~Gp~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~-~~~p~~~~ 218 (411)
T PRK07314 140 MAAGHVSIRYGAKGPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTR-NDDPERAS 218 (411)
T ss_pred HHHHHHHHHhCCCCccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCC-CCCCCcCc
Confidence 99999999999999999999999999999999999999999999999999998888888888888887743 34466789
Q ss_pred CCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 018323 163 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDY 242 (358)
Q Consensus 163 ~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~ 242 (358)
+|||.+++|+++|||++++||++++.|+++|.+++++|+|++.++|+.+.+.|++...+..++++++|+++|++++||||
T Consensus 219 ~pfd~~~dG~~~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~dId~ 298 (411)
T PRK07314 219 RPFDKDRDGFVMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDY 298 (411)
T ss_pred CCCcCCCCCEeEEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCE
Confidence 99999999999999999999999999999999999999999999998888888777788899999999999999999999
Q ss_pred EEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 018323 243 VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFND 322 (358)
Q Consensus 243 i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~ 322 (358)
||+|||||+.+|..|..++.++|+... .++++++.|+++||+.+|||++++++++++|++++|||++|+++|+|.+++
T Consensus 299 v~~hgtgt~~~d~~E~~al~~~~~~~~--~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~ 376 (411)
T PRK07314 299 INAHGTSTPAGDKAETQAIKRVFGEHA--YKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDL 376 (411)
T ss_pred EEccccCCccccHHHHHHHHHHhcccC--CCCeeECccchhchhHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCc
Confidence 999999999999999999999998643 468999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 323 NFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 323 ~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
++++ .+.+..+.+++++|+|||||+|+|+||++|.
T Consensus 377 ~~~~-~~~~~~~~~~al~~s~gfGG~n~~~vl~~~~ 411 (411)
T PRK07314 377 DYVP-NEARERKIDYALSNSFGFGGTNASLVFKRYE 411 (411)
T ss_pred cccC-CcccCCCCCEEEEecccCCCceEEEEEecCC
Confidence 9888 5556678899999999999999999999984
|
|
| >PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-65 Score=484.10 Aligned_cols=343 Identities=41% Similarity=0.656 Sum_probs=308.1
Q ss_pred cchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHH-hcccCCCCcchhhhhhh
Q 018323 4 RGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICE-KRLRRLSPFFIPRILIN 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 82 (358)
+.+..|+|++..++++.|+++||+|||+++++. +.+++||++|++.+........+..+.. .+...++|+.++..++|
T Consensus 61 ~~~~~~~~~r~~~~a~~aa~~Al~dAGl~~~~~-~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 139 (406)
T PRK07967 61 DRKVMRFMGDASAYAYLAMEQAIADAGLSEEQV-SNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMAS 139 (406)
T ss_pred CHHHhhcCCHHHHHHHHHHHHHHHHcCCCCccC-CCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccc
Confidence 345678899999999999999999999987665 4689999999998887666655555555 66778899999999999
Q ss_pred HHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCC
Q 018323 83 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 162 (358)
Q Consensus 83 ~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 162 (358)
.++++|++.||++||+++++++|+|++.||..|+++|++|++|++||+|+|.. .+.....|..++.++..++.+|+..|
T Consensus 140 ~~a~~is~~~~l~Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~-~~~~~~~f~~~~~ls~~~~~~p~~~~ 218 (406)
T PRK07967 140 TVSACLATPFKIKGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEEL-DWEMSCLFDAMGALSTKYNDTPEKAS 218 (406)
T ss_pred hHHHHHHHHHCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeeccc-ChHHHHHHHHhhhhccCCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999974 45555668888888866566788899
Q ss_pred CCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 018323 163 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDY 242 (358)
Q Consensus 163 ~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~ 242 (358)
||||.+++|+++|||++++|||++++|+++|+++|++|.|++.++|+.+.+.| ++.++.++|+++|+.++ + ||||
T Consensus 219 rPFd~~r~G~v~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~~~~p--~~~~~~~a~~~Al~~~~--~-~Idy 293 (406)
T PRK07967 219 RAYDANRDGFVIAGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAP--SGEGAVRCMQMALATVD--T-PIDY 293 (406)
T ss_pred cCCcCCCCceeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEECCCCCCCCCC--CHHHHHHHHHHHHhCCC--C-CccE
Confidence 99999999999999999999999999999999999999999999999988776 68889999999998654 5 9999
Q ss_pred EEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCC-C
Q 018323 243 VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF-N 321 (358)
Q Consensus 243 i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~-~ 321 (358)
|++|||||+.+|.+|..+++++|+.. .+||+++|+++||+++|+|++++++++++|++++|||++|+++++|++ +
T Consensus 294 i~aHgtGT~~~D~~E~~Ai~~~fg~~----~~~v~s~K~~~GH~~~AaG~~e~i~~~lal~~~~iPpt~~~~~~~~~~~~ 369 (406)
T PRK07967 294 INTHGTSTPVGDVKELGAIREVFGDK----SPAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAAG 369 (406)
T ss_pred EEcCCCCCCCCCHHHHHHHHHHhCCC----CCeeECcccccccCccccchHHHHHHHHHHhcCcCCCCCCCCCCCccccC
Confidence 99999999999999999999999763 368999999999999999999999999999999999999999999988 5
Q ss_pred CCCCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 322 DNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 322 ~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
+++++ +..+..+.+.+|+|||||||+|+|+||++|+
T Consensus 370 ~~~~~-~~~~~~~~~~~l~~sfgfGG~n~~lvl~~~~ 405 (406)
T PRK07967 370 MPIVT-ETTDNAELTTVMSNSFGFGGTNATLVFRRYK 405 (406)
T ss_pred CCccC-CCCcCCCCCEEEEecccCCCeeEEEEEEecC
Confidence 77776 4445557899999999999999999999974
|
|
| >PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-65 Score=485.31 Aligned_cols=346 Identities=56% Similarity=0.885 Sum_probs=318.2
Q ss_pred ccCCHHHHHHHHHHHHHHHHCCCC-CCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHH
Q 018323 9 KSIARFIAYALCAADEALHDAKWL-PSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGH 87 (358)
Q Consensus 9 ~~~~~~~~l~~~aa~~Al~dAG~~-~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 87 (358)
++.++.++|++.++++||+|||++ ++++ +..++|+++|++.+++......+..+.+.+...++|+.++.++.|.++++
T Consensus 72 ~~~~~~~~l~~~aa~~Al~dAGl~~~~~~-~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ 150 (421)
T PTZ00050 72 KRESRATHFAMAAAREALADAKLDILSEK-DQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGL 150 (421)
T ss_pred ccCCHHHHHHHHHHHHHHHHcCCCccccc-CcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHH
Confidence 356899999999999999999998 6666 37899999999998888887777777788888899999999999999999
Q ss_pred HHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcC
Q 018323 88 VSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC 167 (358)
Q Consensus 88 ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~ 167 (358)
|++.||++||+++|+++|+|++.||.+|+++|++|++|++||+|+|..++|..+..|...+.++..+..+++..++|||+
T Consensus 151 is~~~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~ 230 (421)
T PTZ00050 151 VAIKHKLKGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDK 230 (421)
T ss_pred HHHHhCCCCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcC
Confidence 99999999999999999999999999999999999999999999999888888888888888876555567789999999
Q ss_pred CCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHH-cCCCCCCccEEEec
Q 018323 168 GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ-SGLQSHQVDYVNAH 246 (358)
Q Consensus 168 ~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-agl~~~did~i~~h 246 (358)
+++|+++||||+++||++++.|+++|.++|++|+|++.++|+.+.+.|.+.+.+..++++++|++ +|++++||||||+|
T Consensus 231 ~~~G~~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi~~~dId~ie~h 310 (421)
T PTZ00050 231 DRAGFVMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANININDVDYVNAH 310 (421)
T ss_pred CCCCEeeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccCCChhhCCEEECC
Confidence 99999999999999999999999999999999999999999988888888889999999999999 99999999999999
Q ss_pred CCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCc
Q 018323 247 ATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMP 326 (358)
Q Consensus 247 ~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~ 326 (358)
||||+.+|.+|..++.++|+... ..++++++.|+++||+++|||++++++++++|++++|||++|+++|+|.+++++++
T Consensus 311 gtgt~~~D~~E~~al~~~~~~~~-~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l~~~~ 389 (421)
T PTZ00050 311 ATSTPIGDKIELKAIKKVFGDSG-APKLYVSSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECDLNLVQ 389 (421)
T ss_pred CccCCCCCHHHHHHHHHHhcccc-CCCceEECccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCccccC
Confidence 99999999999999999998642 14689999999999999999999999999999999999999999999999988887
Q ss_pred cccCCC--CCCcEEEeeccccccceeeeEeeec
Q 018323 327 LTASKD--MPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 327 ~~~~~~--~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
..... .+.+++|+|||||||+|+|+||+|+
T Consensus 390 -~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~~~ 421 (421)
T PTZ00050 390 -GKTAHPLQSIDAVLSTSFGFGGVNTALLFTKY 421 (421)
T ss_pred -CcccCcCCCCCEEEEeeecCCCeeEEEEEeCC
Confidence 33222 2579999999999999999999986
|
|
| >PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-65 Score=481.88 Aligned_cols=342 Identities=37% Similarity=0.578 Sum_probs=309.7
Q ss_pred cchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhH
Q 018323 4 RGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINM 83 (358)
Q Consensus 4 ~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (358)
++.+.|+|++.++|++.++++||+|||+......+++|+||++|++.+.......+.+.+.+.+...++++.++..++|.
T Consensus 63 ~~~~~r~~~~~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 142 (405)
T PRK09116 63 TRKKIRSMGRVSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHT 142 (405)
T ss_pred CHHHHhhCCHHHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccH
Confidence 45667899999999999999999999995432224679999999999998888888887777777788999999999999
Q ss_pred HHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCC
Q 018323 84 ASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 163 (358)
Q Consensus 84 ~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 163 (358)
++++|++.||++||+++++++|+|++.||..|+++|++|++|++||+|+|. .++.....|..++.++.. ...|...|+
T Consensus 143 ~a~~is~~~~~~Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~-~~~~~~~~f~~l~~~~~~-~~~~~~~~r 220 (405)
T PRK09116 143 TAVNVGLFFGLKGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEE-LCPTEAAVFDTLFATSTR-NDAPELTPR 220 (405)
T ss_pred HHHHHHHHhCCCCCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchh-cChHHHHHHHHhhhhccC-CCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999998 567666777777665432 234667899
Q ss_pred CCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEE
Q 018323 164 PFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYV 243 (358)
Q Consensus 164 pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i 243 (358)
|||.+++|+++|||++++|||++++|+++|.++|++|+|++.++|+.+...| +...+.++++++|++++++|+|||||
T Consensus 221 Pfd~~~~G~v~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~~~p--~~~~~~~ai~~AL~~Agi~p~dId~I 298 (405)
T PRK09116 221 PFDANRDGLVIGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQP--QAETMQIAMELALKDAGLAPEDIGYV 298 (405)
T ss_pred CCcCCCCCEeeeccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCcCCCC--CHHHHHHHHHHHHHHhCCCHHHcCEE
Confidence 9999999999999999999999999999999999999999999999887776 45778899999999999999999999
Q ss_pred EecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCC-CC
Q 018323 244 NAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF-ND 322 (358)
Q Consensus 244 ~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~-~~ 322 (358)
++|||||+.+|..|..+++++|+. .+|+++.|+++||+++|+|++++++++++|++++|||++|+++|+|+| ++
T Consensus 299 ~~Hgtgt~~~D~~E~~Ai~~~fg~-----~~pv~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~~~~~~~~~~~l 373 (405)
T PRK09116 299 NAHGTATDRGDIAESQATAAVFGA-----RMPISSLKSYFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGAL 373 (405)
T ss_pred ECcCccCCCCCHHHHHHHHHHhCC-----CCeeECcchhhcccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCccc
Confidence 999999999999999999999985 379999999999999999999999999999999999999999999999 68
Q ss_pred CCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 323 NFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 323 ~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
++++ .+.++.+.+++|+|||||||+|+++||+
T Consensus 374 ~~v~-~~~~~~~~~~~l~nsfGfGG~n~~lvl~ 405 (405)
T PRK09116 374 DYIM-GEAREIDTEYVMSNNFAFGGINTSLIFK 405 (405)
T ss_pred CccC-CCCccCCCCEEEEeeecCCcccEEEEEC
Confidence 8887 5666778899999999999999999985
|
|
| >PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-64 Score=480.04 Aligned_cols=346 Identities=47% Similarity=0.787 Sum_probs=320.2
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 82 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (358)
.++++.|++++..+|++.++++||+|||+++++++ ..++|+++|++.+++...+..+..+.+.+...++|+.++..+.|
T Consensus 61 ~~~~~~~~~~~~~~l~~~Aa~~AL~dAGl~~~~~~-~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (406)
T PRK08439 61 MDPKEVKKADRFIQLGLKAAREAMKDAGFLPEELD-AERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVN 139 (406)
T ss_pred CCHHHHhhcCHHHHHHHHHHHHHHHHcCCCcccCC-CCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhccccccc
Confidence 45677889999999999999999999999987774 78999999999999888888777777788888999999999999
Q ss_pred HHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCC
Q 018323 83 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 162 (358)
Q Consensus 83 ~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 162 (358)
.++++|+..||++||+++++++|+|++.||..|+++|++|++|++||+|+|..+++..+..|...+.++.. ..+|+..|
T Consensus 140 ~~a~~is~~~gl~Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~-~~~p~~~~ 218 (406)
T PRK08439 140 MLGGFISIEHGLKGPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTR-NDDPKKAS 218 (406)
T ss_pred HHHHHHHHHhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccC-CCCCccCc
Confidence 99999999999999999999999999999999999999999999999999998999998999988888743 34467789
Q ss_pred CCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 018323 163 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDY 242 (358)
Q Consensus 163 ~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~ 242 (358)
+|||.+++|+++|||++++|||+++.|+++|.++|++|.|++.+.|+.+.+.|++ .++.++++++|+++|+ +||||
T Consensus 219 rpfd~~~~G~v~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~p~~--~~~~~a~~~al~~ag~--~~i~~ 294 (406)
T PRK08439 219 RPFDKDRDGFVMGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAP--EGPLRAMKAALEMAGN--PKIDY 294 (406)
T ss_pred CCccCCCCcEEeeCceEEEEEccHHHHHHCCCeEEEEEEeEEccCCCCCCCCCCH--HHHHHHHHHHHHHcCC--CccCE
Confidence 9999999999999999999999999999999999999999999999888888765 6788999999999998 79999
Q ss_pred EEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 018323 243 VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFND 322 (358)
Q Consensus 243 i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~ 322 (358)
|++|||||+.+|..|..++.++|+... ..++++++|+++||+++|+|++++++++++|++++|||++|+++|+|++++
T Consensus 295 v~~hgtgt~~~D~~E~~al~~~f~~~~--~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~ 372 (406)
T PRK08439 295 INAHGTSTPYNDKNETAALKELFGSKE--KVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPDPECDL 372 (406)
T ss_pred EEccCCcCCCCCHHHHHHHHHHhcccC--CCCeEECcccccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCCc
Confidence 999999999999999999999998643 346899999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 323 NFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 323 ~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
++++ ...+..+.+.+|+|||||||+|+++||+||
T Consensus 373 ~~~~-~~~~~~~~~~~l~nsfgfGG~n~~lvl~~~ 406 (406)
T PRK08439 373 DYIP-NVARKAELNVVMSNSFGFGGTNGVVIFKKV 406 (406)
T ss_pred ccCC-CccccCCCCEEEEeeecCCCceEEEEEecC
Confidence 9998 566677899999999999999999999986
|
|
| >TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-63 Score=474.53 Aligned_cols=348 Identities=58% Similarity=0.925 Sum_probs=321.2
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 82 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (358)
+++++.|+|+++++|+++++++||+|||+++++++ ..++|+++|++.+++...+.++..+.+.+...++|+.++.++.|
T Consensus 60 ~~~~~~~~~~~~~~l~~~aa~~Al~dAgl~~~~~~-~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (407)
T TIGR03150 60 IDKKEARRMDRFIQYALAAAKEAVEDSGLDIEEED-AERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIIN 138 (407)
T ss_pred CCHHHHhhcCHHHHHHHHHHHHHHHhcCCCcccCC-ccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhccccc
Confidence 46778899999999999999999999999988874 88999999999999988888888888888888999999999999
Q ss_pred HHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCC
Q 018323 83 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 162 (358)
Q Consensus 83 ~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 162 (358)
..+++|++.||++||+++++++|+|++.||.+|+++|++|++|++||+|+|.++++.....+...+.++.. ...+...+
T Consensus 139 ~~a~~is~~~gl~g~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~-~~~~~~~~ 217 (407)
T TIGR03150 139 MAAGQISIRYGAKGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTR-NDDPEKAS 217 (407)
T ss_pred HHHHHHHHHhCCCCcccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCC-CCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999998888888888877777632 33456679
Q ss_pred CCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 018323 163 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDY 242 (358)
Q Consensus 163 ~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~ 242 (358)
+||+.+++|+++|||++++||++++.|+++|.+++++|+|++.++++.+...|.+...++.++++++|+++|++++||||
T Consensus 218 ~pfd~~~~g~~~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~dId~ 297 (407)
T TIGR03150 218 RPFDKDRDGFVMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDY 297 (407)
T ss_pred CCCcCCCCcEEEeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhHCCE
Confidence 99999999999999999999999999999999999999999999998887777777788999999999999999999999
Q ss_pred EEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 018323 243 VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFND 322 (358)
Q Consensus 243 i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~ 322 (358)
||+|++||+.+|.+|..++.++|+... .++|+++.|+++||+.+|||++++++++++|++++|||++|+++|+|.+++
T Consensus 298 ve~h~tgt~~~D~~E~~a~~~~~~~~~--~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~ 375 (407)
T TIGR03150 298 INAHGTSTPLGDKAETKAIKRVFGDHA--YKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECDL 375 (407)
T ss_pred EeCcCCCCCCCCHHHHHHHHHHhccCC--CCCceeCCcchhchhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCc
Confidence 999999999999999999999998643 368999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 323 NFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 323 ~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
++++ .+.+..+.+++++|+|||||+|+|+||+
T Consensus 376 ~~v~-~~~~~~~~~~~l~~s~gfgG~n~~~vl~ 407 (407)
T TIGR03150 376 DYVP-NEARERKIDYALSNSFGFGGHNASLVFK 407 (407)
T ss_pred cccC-CCCccCCcCEEEEecccCCCceEEEEeC
Confidence 9988 4556667899999999999999999984
|
FabB sequences should fall well below the noise cutoff of this model. |
| >cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-62 Score=466.92 Aligned_cols=349 Identities=54% Similarity=0.879 Sum_probs=324.3
Q ss_pred CCccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhh
Q 018323 1 MRTRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRIL 80 (358)
Q Consensus 1 ~~~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (358)
|++++++.++||++++|+++++++||+|||+++++++ ..++|+++|++.+++...+.++..+.+++...++|+.++..+
T Consensus 58 ~~~~~~~~~~~~~~~~l~~~aa~~AL~dAgl~~~~~~-~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (406)
T cd00834 58 DYLDRKELRRMDRFAQFALAAAEEALADAGLDPEELD-PERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMAL 136 (406)
T ss_pred hcCCHHHhccCCHHHHHHHHHHHHHHHHcCCCcccCC-ccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhc
Confidence 4578889999999999999999999999999988774 889999999999999999999998888888889999999999
Q ss_pred hhHHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCC
Q 018323 81 INMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 160 (358)
Q Consensus 81 ~~~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~ 160 (358)
.+..+++|+..||++||+++++++|+|++.||..|+++|++|++|.+||+|+|..+.+..+..+...+.++..... |..
T Consensus 137 ~~~~a~~ia~~lgl~g~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~-p~~ 215 (406)
T cd00834 137 PNMAAGQVAIRLGLRGPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDD-PEK 215 (406)
T ss_pred ccHHHHHHHHHhCCCCcccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCC-Ccc
Confidence 9999999999999999999999999999999999999999999999999999998889999999888888754222 556
Q ss_pred CCCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 018323 161 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQV 240 (358)
Q Consensus 161 ~~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~di 240 (358)
.++||+.+++|+++||||+++||++.+.|++++.+++++|+|++.+.++.+...|++...++.++++++|+++|++++||
T Consensus 216 ~~~pf~~~~~g~~~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~dI 295 (406)
T cd00834 216 ASRPFDKDRDGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDI 295 (406)
T ss_pred CCCCCCCCCCCEeeeccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHC
Confidence 89999999999999999999999999999999999999999999999988877777778899999999999999999999
Q ss_pred cEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Q 018323 241 DYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF 320 (358)
Q Consensus 241 d~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~ 320 (358)
|||++|++||+.+|..|..++.++|+... .++++++.|+++||+++|||++++++++++|+++++||++|+++|+|.+
T Consensus 296 d~v~~h~tgt~~~d~~E~~al~~~~~~~~--~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~ 373 (406)
T cd00834 296 DYINAHGTSTPLNDAAESKAIKRVFGEHA--KKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVLPPTINLEEPDPEC 373 (406)
T ss_pred CEEecccccCccccHHHHHHHHHHhcccC--CCCceeCcchhhccchhhhhHHHHHHHHHHHhcCCcCCCCCCCCCCCCC
Confidence 99999999999999999999999998742 4689999999999999999999999999999999999999999999988
Q ss_pred CCCCCccccCCCCCCcEEEeeccccccceeeeEe
Q 018323 321 NDNFMPLTASKDMPISAALSNSFGFGGTNASLLF 354 (358)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il 354 (358)
++++++ .+.++++.+++++|+|||||+|+|+||
T Consensus 374 ~~~~~~-~~~~~~~~~~~l~~s~g~gG~n~~~vl 406 (406)
T cd00834 374 DLDYVP-NEAREAPIRYALSNSFGFGGHNASLVF 406 (406)
T ss_pred CccccC-CCCccccccEEEEeeecCCceeeEEEC
Confidence 888887 566777889999999999999999996
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-62 Score=535.96 Aligned_cols=347 Identities=31% Similarity=0.489 Sum_probs=303.5
Q ss_pred CCccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHH---H------------------H
Q 018323 1 MRTRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTV---D------------------A 59 (358)
Q Consensus 1 ~~~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~---~------------------~ 59 (358)
|++|+++.+.|||+++|+++++++||+|||+..+ . +++|+|||+|++.+.+.... + .
T Consensus 80 F~i~p~ea~~mDpqqrl~L~~a~eALedAG~~~~-~-~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (2582)
T TIGR02813 80 FGLPPNILELTDISQLLSLVVAKEVLNDAGLPDG-Y-DRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDED 157 (2582)
T ss_pred cCCCHHHHHhcCHHHHHHHHHHHHHHHhCCCCCC-C-CCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhh
Confidence 6789999999999999999999999999999754 4 58999999999776432100 0 0
Q ss_pred HHHHH---HhcccCCCCcchhhhhhhHHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCc
Q 018323 60 AQMIC---EKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSI 136 (358)
Q Consensus 60 ~~~~~---~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~ 136 (358)
...+. ......+++..+++.+.|.+++||++.|||+||+++|+++|+|++.||++|++.|++|+||++||||++...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~g~~~n~~A~RIS~~f~L~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~ 237 (2582)
T TIGR02813 158 SEMLIKKFQDQYIHWEENSFPGSLGNVISGRIANRFDLGGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDN 237 (2582)
T ss_pred HHHhhhhhcccccccCccccccccccHHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeC
Confidence 11111 112234566778999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCC--CCCC
Q 018323 137 DALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH--HITQ 214 (358)
Q Consensus 137 ~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~--~~~~ 214 (358)
++..+..|...+.++ +++.|+|||.+++||++|||++++||++.++|+++|++||++|+|++.++||. +++.
T Consensus 238 ~p~~~~~fs~~~~lS------~~g~crpFD~~adG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~ita 311 (2582)
T TIGR02813 238 SPFMYMSFSKTPAFT------TNEDIQPFDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYA 311 (2582)
T ss_pred CHHHHHHHHhccCcC------CCCCccCCCCCCCcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcC
Confidence 999999999999888 66889999999999999999999999999999999999999999999999997 4555
Q ss_pred CCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhccc-CCCCcceecccCCcCCcccchhHH
Q 018323 215 PHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHA-TSGSLAFSSTKGAIGHLLGAAGAV 293 (358)
Q Consensus 215 ~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~-~~~~~~v~~~k~~~Gh~~~asG~~ 293 (358)
| +..++.++|+++|+++|++|+||+|||+|||||+.+|.+|..++.++|+... ...+++|+++|+++||+++|||++
T Consensus 312 P--~~~gq~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a 389 (2582)
T TIGR02813 312 P--RPEGQAKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTA 389 (2582)
T ss_pred C--CHHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHH
Confidence 5 5677899999999999999999999999999999999999999999998643 235689999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCcc---ccCC------CCCCcEEEeeccccccceeeeEeeec
Q 018323 294 EAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPL---TASK------DMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 294 ~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~---~~~~------~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
++|+++++|+++.|||++|+++|+|.++++..++ .+.+ ...+|++++|||||||+|+|+||++|
T Consensus 390 ~lik~~lal~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~ 462 (2582)
T TIGR02813 390 GMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEY 462 (2582)
T ss_pred HHHHHHHHHhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEeec
Confidence 9999999999999999999999999998763222 2222 23479999999999999999999987
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-62 Score=454.08 Aligned_cols=322 Identities=38% Similarity=0.593 Sum_probs=293.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcc---cCCCCcchhhhhhhHHHHHHHHH
Q 018323 15 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRL---RRLSPFFIPRILINMASGHVSMK 91 (358)
Q Consensus 15 ~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~ia~~ 91 (358)
.+++..++++||+|||++++ .+|+||++|++.+....+++++..+.+++. ..+.|..++.+++|.++++|++.
T Consensus 57 ~~~~~~a~~~Al~dagl~~~----~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 132 (381)
T PRK05952 57 EDLTKTVVTAALKDAGLTPP----LTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQ 132 (381)
T ss_pred cHHHHHHHHHHHHhcCCCCC----CCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHH
Confidence 34667899999999999752 478999999999998888888776665443 25678888999999999999999
Q ss_pred cCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCc
Q 018323 92 YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 171 (358)
Q Consensus 92 lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g 171 (358)
||++||+++++++|+|++.||..|+++|++|++|++||+|+|...++..+..|..++.++. +.|+|||.+++|
T Consensus 133 ~~~~Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~-------~~~rPfd~~r~G 205 (381)
T PRK05952 133 IGTQGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAK-------TGAYPFDRQREG 205 (381)
T ss_pred hCCCCccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCC-------CCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999998889999989988888762 459999999999
Q ss_pred eeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q 018323 172 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTP 251 (358)
Q Consensus 172 ~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~ 251 (358)
+++|||++++||++++.|+++|.++|++|+|++.++|+.+...|++......++++++|+++|++|+|||||++|||||+
T Consensus 206 ~v~gEGaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~ 285 (381)
T PRK05952 206 LVLGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHAHGTATR 285 (381)
T ss_pred ccccccEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHeeEEEccCCCCC
Confidence 99999999999999999999999999999999999999998888888889999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCC
Q 018323 252 LGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASK 331 (358)
Q Consensus 252 ~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~ 331 (358)
.+|.+|..++.++|+. .+|+++.|+++||+++|+|++++++++++|++++|||++|+++|++ ++++++ .++
T Consensus 286 ~~D~~E~~al~~~fg~-----~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~--~~~~v~--~~~ 356 (381)
T PRK05952 286 LNDQREANLIQALFPH-----RVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEF--DLNFVR--QAQ 356 (381)
T ss_pred CCcHHHHHHHHHHcCC-----CCeeecchhhhccChHHHHHHHHHHHHHHHhcCccCCCCCCCCCCC--CCCcCC--Ccc
Confidence 9999999999999974 3799999999999999999999999999999999999999998754 555565 345
Q ss_pred CCCCcEEEeeccccccceeeeEeee
Q 018323 332 DMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 332 ~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
..+.+++++|+|||||+|+++||+|
T Consensus 357 ~~~~~~~l~~s~gfGG~na~lvl~~ 381 (381)
T PRK05952 357 QSPLQNVLCLSFGFGGQNAAIALGK 381 (381)
T ss_pred cCCCCEEEEeeecCCCeeEEEEEeC
Confidence 6678999999999999999999986
|
|
| >cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-61 Score=458.28 Aligned_cols=341 Identities=37% Similarity=0.560 Sum_probs=306.6
Q ss_pred ccchhhccC---CHHHHHHHHHHHHHHHHCCCCCCC-CCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhh
Q 018323 3 TRGLILKSI---ARFIAYALCAADEALHDAKWLPSD-QGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPR 78 (358)
Q Consensus 3 ~~~~~~~~~---~~~~~l~~~aa~~Al~dAG~~~~~-~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (358)
+++...+++ |++++|+++++++||+|||+++++ + +..++|+++|++.++....+..+..+. ....|+.++.
T Consensus 58 ~~~~~~~~~~~~~~~~~l~~~aa~~Al~dAGl~~~~~~-~~~~~gv~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 132 (407)
T cd00828 58 IPGWDAKRTGIVDRTTLLALVATEEALADAGITDPYEV-HPSEVGVVVGSGMGGLRFLRRGGKLDA----RAVNPYVSPK 132 (407)
T ss_pred cCHHHHHhccCCCHHHHHHHHHHHHHHHhCCCCccccC-CccCeEEEEeeccCCHHHHHHHHHHHh----hccCCcccch
Confidence 456677787 999999999999999999998876 5 478999999999998877776665444 3466888888
Q ss_pred hhh--hHHHHHHHHHcCC-CCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccC
Q 018323 79 ILI--NMASGHVSMKYGF-QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYN 155 (358)
Q Consensus 79 ~~~--~~~a~~ia~~lgl-~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~ 155 (358)
.+. |.++++|++.||+ +||+++++++|+|++.||..|+++|++|++|++||+|+|.+. +..+..|..++.++.. .
T Consensus 133 ~~~~~~~~a~~is~~~gl~~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~-~~~~~~f~~~~~ls~~-~ 210 (407)
T cd00828 133 WMLSPNTVAGWVNILLLSSHGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL-EEGLSGFANMGALSTA-E 210 (407)
T ss_pred hccccchHHHHHHHHhCcCCCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC-hHHHHHHHHcCCCCCC-C
Confidence 887 9999999999999 999999999999999999999999999999999999999977 7778888888887743 1
Q ss_pred CCCCCCCCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCC
Q 018323 156 GTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGL 235 (358)
Q Consensus 156 ~~~~~~~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl 235 (358)
..+...++|||.+++|+++|||++++||++++.|+++|.++|++|.|++.++++.+...+. ...++.++++++|+++|+
T Consensus 211 ~~~~~~~~pfd~~~~G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~-~~~~~~~a~~~Al~~Agi 289 (407)
T cd00828 211 EEPEEMSRPFDETRDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPA-GGKGIARAIRTALAKAGL 289 (407)
T ss_pred CCCCcccCCCcCCCCcEEeecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCC-ChHHHHHHHHHHHHHcCC
Confidence 2245689999999999999999999999999999999999999999999999988876665 678899999999999999
Q ss_pred CCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCC
Q 018323 236 QSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAK 315 (358)
Q Consensus 236 ~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~ 315 (358)
+|+|||||++|+|||+.+|..|..+++++|+... .+++++++|+++||+++|+|++++++++++|+++++||++|+++
T Consensus 290 ~~~dId~i~~hgtgt~~~D~~E~~ai~~~~~~~~--~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~l~~~~ipp~~~~~~ 367 (407)
T cd00828 290 SLDDLDVISAHGTSTPANDVAESRAIAEVAGALG--APLPVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDD 367 (407)
T ss_pred CHHHcCEEecccccCccccHHHHHHHHHHHhccC--CCceeecccchhccchhhhhHHHHHHHHHHHhcCccCCCCCCCC
Confidence 9999999999999999999999999999998754 45899999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccccCCCCC--CcEEEeeccccccceeeeEe
Q 018323 316 PDPIFNDNFMPLTASKDMP--ISAALSNSFGFGGTNASLLF 354 (358)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~--~~~~l~~~~g~gG~~~~~il 354 (358)
|+|+++.++++ .+.++++ .+.+++|+|||||+|+|+||
T Consensus 368 ~~~~~~~~~~~-~~~~~~~~~~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 368 VDPDVEHLSVV-GLSRDLNLKVRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred CCccccccccc-CcCccCCCCccEEEEecccCCCcceEEEC
Confidence 99999888777 5555665 49999999999999999986
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. |
| >COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-61 Score=499.85 Aligned_cols=344 Identities=30% Similarity=0.445 Sum_probs=310.4
Q ss_pred CCccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhh
Q 018323 1 MRTRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRIL 80 (358)
Q Consensus 1 ~~~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (358)
|.++|++...||||+||.++.+++||||||+.++.+. ++.+|||+|.+..++....... .. ...++...+..
T Consensus 78 FgisPrEA~~mDPQqRllLe~aw~AlEdAG~~~~~l~-g~~tgV~~g~~~~~y~~~~~~~------~~-~~~~~~~~g~~ 149 (1061)
T COG3321 78 FGISPREAEAMDPQQRLLLEVAWEALEDAGIYPDSLR-GSATGVFAGASVADYLLLLLAD------DE-AEPEYAITGNS 149 (1061)
T ss_pred cCCCHHHHHhcCchHhHHHHHHHHHHHHcCCCccccC-CcceEEEEeeccCccccccccc------cc-cccceecccch
Confidence 7899999999999999999999999999999998884 6899999999887765432111 11 34566677777
Q ss_pred hhHHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCC
Q 018323 81 INMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 160 (358)
Q Consensus 81 ~~~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~ 160 (358)
.+..++|||+.|+|+||+++|+++|+|+++|+++|++.|+.|+||++|++|+....+|.....+...+.++ +++
T Consensus 150 ~~~~a~Risy~l~l~GPs~~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls------~~g 223 (1061)
T COG3321 150 SSVAAGRISYVLGLSGPSVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLS------PDG 223 (1061)
T ss_pred hhHHHHHHHHHhcCCCCCccccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcC------CCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999888888 789
Q ss_pred CCCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 018323 161 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQV 240 (358)
Q Consensus 161 ~~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~di 240 (358)
.|++||.+++||++|||++++||++.++|.++|++||++|+|.+.++||.......|+..++...++++|+++||+|++|
T Consensus 224 ~c~~fd~~adG~v~geG~g~vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~tv 303 (1061)
T COG3321 224 RCKAFDADADGYVRGEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATV 303 (1061)
T ss_pred cceecccCCCCEEEeeeEEEEEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCcccC
Confidence 99999999999999999999999999999999999999999999999996544444567899999999999999999999
Q ss_pred cEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Q 018323 241 DYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF 320 (358)
Q Consensus 241 d~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~ 320 (358)
+|||.|||||+++|++|..++..+|+....+.++.++++|+|+||+..|+|+++++|++++|++++|||++|+++|+|.+
T Consensus 304 ~yvEaHgTGT~lGDpiE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~~ip~~l~~~~~np~i 383 (1061)
T COG3321 304 QYVEAHGTGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPPTLHFDTPNPEI 383 (1061)
T ss_pred cEEEecCCCCCCcCHHHHHHHHHHhccCCCCCcccccccccccccHHHHHHHHHHHHHHHhhhcCccCCcCCCCCCCcCC
Confidence 99999999999999999999999998765567899999999999999999999999999999999999999999999999
Q ss_pred CCCCCcc-------ccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 321 NDNFMPL-------TASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 321 ~~~~~~~-------~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
+++..|+ .+.....+|++.|+||||||+|+|+||++++
T Consensus 384 ~~~~sp~~v~~~~~~W~~~~~prrAgvssfG~gGtNaHvIlEe~~ 428 (1061)
T COG3321 384 DFDSSPFVVPTEATPWPTGGGPRRAGVSSFGFGGTNAHVILEEAP 428 (1061)
T ss_pred ccccCCeEeecCCcCCCCCCCCceeeeeccCCCCCceEEEEeecC
Confidence 8875544 1222226899999999999999999999864
|
|
| >PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-59 Score=446.99 Aligned_cols=339 Identities=32% Similarity=0.473 Sum_probs=294.3
Q ss_pred cchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhH
Q 018323 4 RGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINM 83 (358)
Q Consensus 4 ~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (358)
+++..|+|++..+|++.++++||+|||+++ . +.+++||++|++.+........++.+ ..+...+.|++....+++.
T Consensus 70 ~~~~~r~~~~~~~lal~Aa~eAl~dAgl~~--~-~~~riGvivG~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~ 145 (410)
T PRK07103 70 DAKLLRRASLSAQAALAAAREAWRDAALGP--V-DPDRIGLVVGGSNLQQREQALVHETY-RDRPAFLRPSYGLSFMDTD 145 (410)
T ss_pred CHHHhhcCCHHHHHHHHHHHHHHHhcCcCC--C-CCCCEEEEEccCCcchHHHHHHHHHh-ccCccccChhhhhhhcchH
Confidence 445678899999999999999999999953 2 46899999998877666655555444 2345567777777777888
Q ss_pred HHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccc-cCCCCCCCC
Q 018323 84 ASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTK-YNGTPQEAS 162 (358)
Q Consensus 84 ~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~ 162 (358)
++++|++.||++||+++++++|+|++.||..|+++|++|++|++||+|++...++.....+...+.++.. +..+|...|
T Consensus 146 ~a~~ia~~lgl~G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~ 225 (410)
T PRK07103 146 LVGLCSEQFGIRGEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAAC 225 (410)
T ss_pred HHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCc
Confidence 9999999999999999999999999999999999999999999999999887888888888888777532 244577889
Q ss_pred CCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 018323 163 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDY 242 (358)
Q Consensus 163 ~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~ 242 (358)
+|||.+++|+++|||++++||+++++|+++|.++|++|+|++.++|+.+...| ...++.++++++|+++|++|+||||
T Consensus 226 rPfd~~~dG~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p--~~~~~~~a~~~Al~~Agi~~~dId~ 303 (410)
T PRK07103 226 RPFDQDRDGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDP--SLEGEMRVIRAALRRAGLGPEDIDY 303 (410)
T ss_pred CCCCCCCCCeeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCCCCCC--CHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 99999999999999999999999999999999999999999999998876555 5667889999999999999999999
Q ss_pred EEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCC-CCCCC
Q 018323 243 VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKP-DPIFN 321 (358)
Q Consensus 243 i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~-~~~~~ 321 (358)
|++|||||+.+|..|..++. +.. ..++|+++.|+++||+.+|+|++++++++++|+++.|||++|+++| ++.
T Consensus 304 v~~hgtgt~~~D~~E~~al~---~~~--~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~-- 376 (410)
T PRK07103 304 VNPHGTGSPLGDETELAALF---ASG--LAHAWINATKSLTGHGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDER-- 376 (410)
T ss_pred EEccCCCCCCCCHHHHHHHh---cCC--CCCCeEECCCcccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCC--
Confidence 99999999999999999993 222 1468999999999999999999999999999999999999999987 554
Q ss_pred CCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 322 DNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 322 ~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
+++++ ...+..+.+++|+|+|||||+|+++||+|
T Consensus 377 ~~~v~-~~~~~~~~~~~l~~s~gfGG~n~~~vl~~ 410 (410)
T PRK07103 377 FRWVG-STAESARIRYALSLSFGFGGINTALVLER 410 (410)
T ss_pred cCccC-CCCcCCCCCEEEEecccCCCceEEEEEeC
Confidence 44555 44455678999999999999999999986
|
|
| >PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-58 Score=439.46 Aligned_cols=343 Identities=38% Similarity=0.524 Sum_probs=298.6
Q ss_pred hccCCHHHHHHHHHHHHHHHHCCCCCCCC-------------CCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCc
Q 018323 8 LKSIARFIAYALCAADEALHDAKWLPSDQ-------------GQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPF 74 (358)
Q Consensus 8 ~~~~~~~~~l~~~aa~~Al~dAG~~~~~~-------------~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~ 74 (358)
.+.+++.+++++.++++||+|||++..+. +...+++++.++...... .+..+.........+.
T Consensus 69 ~~~~~~~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 144 (425)
T PRK06501 69 FGASALSEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAP----SYDRLLRAARGGRFDA 144 (425)
T ss_pred ccccCHHHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHH----HHHHHHhhcCcccCCh
Confidence 44577888999999999999999953221 125678888887654332 2333444333333455
Q ss_pred chhhhhhhHHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhccccccc
Q 018323 75 FIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKY 154 (358)
Q Consensus 75 ~~~~~~~~~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~ 154 (358)
+++....+..+++|+..||++||+++++++|+|++.||.+|+++|++|++|++||+|+|...++..+..+...+.++..
T Consensus 145 ~~~~~~~~~~a~~i~~~~gl~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~- 223 (425)
T PRK06501 145 LHERFQFGSIADRLADRFGTRGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQ- 223 (425)
T ss_pred hhhhhcccHHHHHHHHHhCCCCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccC-
Confidence 5677778899999999999999999999999999999999999999999999999999988889888888888877642
Q ss_pred CCCCCCCCCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcC
Q 018323 155 NGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSG 234 (358)
Q Consensus 155 ~~~~~~~~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ag 234 (358)
...+...++|||.+++|+++|||++++||++.+.|+++|.++|++|.|++.++++.+...+.++...+.++++++|+++|
T Consensus 224 ~~~~~~~~rpfd~~r~G~v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~AL~~ag 303 (425)
T PRK06501 224 NDPPEKASKPFSKDRDGFVMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALADAG 303 (425)
T ss_pred CCCCCcccCCCCCCCCCeeeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 23356789999999999999999999999999999999999999999999999988877777778889999999999999
Q ss_pred CCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCC
Q 018323 235 LQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLA 314 (358)
Q Consensus 235 l~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~ 314 (358)
++|+|||||++|||||+.+|.+|..++.++|+... ..+||++.|+++||+.+|+|++++++++++|++++|||++|++
T Consensus 304 i~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~~--~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~n~~ 381 (425)
T PRK06501 304 LTPEQIDYINAHGTSTPENDKMEYLGLSAVFGERL--ASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYD 381 (425)
T ss_pred CCHHHcCEEEecCccCcchHHHHHHHHHHHhcccC--CCcEEECCCcccCCCchhhhHHHHHHHHHHHhcCcCCCcCCCC
Confidence 99999999999999999999999999999997532 4689999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 315 KPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
+|+|.+++++++ ...+..+.+.+++|||||||+|+++||++++
T Consensus 382 ~~~~~~~~~~~~-~~~~~~~~~~~l~ns~gfgG~n~~~vl~~~~ 424 (425)
T PRK06501 382 NPDPAIPLDVVP-NVARDARVTAVLSNSFGFGGQNASLVLTAEP 424 (425)
T ss_pred CCCCCCCcccCC-CcccCCCCCEEEEeCccCCCeeEEEEEecCC
Confidence 999999999987 4556667899999999999999999999975
|
|
| >smart00825 PKS_KS Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-58 Score=443.95 Aligned_cols=342 Identities=30% Similarity=0.471 Sum_probs=302.3
Q ss_pred CCccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhh
Q 018323 1 MRTRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRIL 80 (358)
Q Consensus 1 ~~~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (358)
|++|+++.|+|++.++|+++|+++||+|||+++++++ .++++|++|+..+++ .....+....+.++.++..+
T Consensus 74 ~~i~~~~~~~~~~~~~l~~~aa~~Al~dAGl~~~~id-~~~~gv~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 145 (424)
T smart00825 74 FGISPREAEAMDPQQRLLLEVAWEALEDAGIDPESLR-GSRTGVFVGAMSSDY-------AELLARDPEDIEGYAATGTA 145 (424)
T ss_pred cCCCHHHHHhcCHHHHHHHHHHHHHHHHcCCChhHcC-CCCCEEEEEEcHHHH-------HHHHhhCccccchhhhccch
Confidence 3578888999999999999999999999999988774 789999999875432 22334455667888888888
Q ss_pred hhHHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCC
Q 018323 81 INMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 160 (358)
Q Consensus 81 ~~~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~ 160 (358)
.+..+++|++.||++||+++++++|+|++.||..|+++|++|++|+|||+|+|...++..+..+...+.++ +..
T Consensus 146 ~~~~a~~i~~~lgl~g~~~~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~------~~~ 219 (424)
T smart00825 146 RSFIANRISYFFDLRGPSVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLS------PDG 219 (424)
T ss_pred hHHHHHHHHHHhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCC------CCC
Confidence 89999999999999999999999999999999999999999999999999999988888888887777766 567
Q ss_pred CCCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 018323 161 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQV 240 (358)
Q Consensus 161 ~~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~di 240 (358)
.++||+..++|+++|||++++||++++.|++++.++|++|+|++..+++.+.....+.......+++++|+++|++++||
T Consensus 220 ~~~pf~~~~~g~~~geGAaalVLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dI 299 (424)
T smart00825 220 RCKTFDADADGYVRGEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADV 299 (424)
T ss_pred CCCCCCCCCCcccccceEEEEEEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHc
Confidence 89999999999999999999999999999999999999999999998877654444567788899999999999999999
Q ss_pred cEEEecCCCCCCCcHHHHHHHHHHhhccc-CCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Q 018323 241 DYVNAHATSTPLGDTVEATAIRTVFSDHA-TSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 319 (358)
Q Consensus 241 d~i~~h~~gt~~~d~~E~~a~~~~~~~~~-~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~ 319 (358)
|+|+.|||||+.+|..|..++.++|+... .+.++++++.|+++||+.+|+|++++++++++|++++|||++|+++|+|.
T Consensus 300 d~i~~h~tgt~~~d~~E~~al~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~ 379 (424)
T smart00825 300 DYVEAHGTGTPLGDPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTIPPTLHFETPNPH 379 (424)
T ss_pred cEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceEEeccccccCCcccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Confidence 99999999999999999999999998643 23468999999999999999999999999999999999999999999999
Q ss_pred CCCC----CCccccCCC----CCCcEEEeeccccccceeeeEeeec
Q 018323 320 FNDN----FMPLTASKD----MPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 320 ~~~~----~~~~~~~~~----~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
++++ +++ .+.++ ..++.+++|+|||||+|+|+||++|
T Consensus 380 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~s~gfgg~n~~lvl~~~ 424 (424)
T smart00825 380 IDLEESPLRVP-TEATPWPATGRPRRAGVSSFGFGGTNAHVILEEA 424 (424)
T ss_pred CCcccCceEcc-CCCcCCCCCCCccEEEEeccCCCCceEEEEEecC
Confidence 8876 333 33333 2589999999999999999999986
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. |
| >cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-57 Score=431.10 Aligned_cols=339 Identities=31% Similarity=0.498 Sum_probs=298.2
Q ss_pred CCccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhh
Q 018323 1 MRTRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRIL 80 (358)
Q Consensus 1 ~~~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (358)
|++++++.++|+++++|+++|+++||+|||++++++ +..++||++|+..+.+ ..+..+....++++.++...
T Consensus 74 ~~~~~~~~~~~~~~~~l~~~aa~~AL~dAgl~~~~~-~~~~~gv~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 145 (421)
T cd00833 74 FGISPREAEAMDPQQRLLLEVAWEALEDAGYSPESL-AGSRTGVFVGASSSDY-------LELLARDPDEIDAYAATGTS 145 (421)
T ss_pred cCCCHHHHHhcCHHHHHHHHHHHHHHHHcCCCchhc-CCCCceEEeCcCHHHH-------HHHHhhcccccCcccccCcc
Confidence 356888999999999999999999999999998776 4889999999986532 22223344467888888888
Q ss_pred hhHHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCC
Q 018323 81 INMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 160 (358)
Q Consensus 81 ~~~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~ 160 (358)
.+..+++|+..+|++||+++++++|+|++.||..|+++|++|++|++||+|+|...++..+..+...+.++ +..
T Consensus 146 ~~~~a~~i~~~~gl~g~~~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~------~~~ 219 (421)
T cd00833 146 RAFLANRISYFFDLRGPSLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLS------PDG 219 (421)
T ss_pred hHHHHHHHHHHcCCCCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCC------CCC
Confidence 89999999999999999999999999999999999999999999999999999988888777787777766 456
Q ss_pred CCCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 018323 161 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQV 240 (358)
Q Consensus 161 ~~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~di 240 (358)
.++||+..++|+++|||++++||++++.|++++.+++++|.|++.++++.+.....+...++.++++++|+++|++++||
T Consensus 220 ~~~pf~~~~~g~~~geGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~di 299 (421)
T cd00833 220 RCRPFDADADGYVRGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDI 299 (421)
T ss_pred CCCCCCCCCCCeeeeceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHC
Confidence 79999999999999999999999999999999999999999999998876554445567888999999999999999999
Q ss_pred cEEEecCCCCCCCcHHHHHHHHHHhhcccC-CCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Q 018323 241 DYVNAHATSTPLGDTVEATAIRTVFSDHAT-SGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 319 (358)
Q Consensus 241 d~i~~h~~gt~~~d~~E~~a~~~~~~~~~~-~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~ 319 (358)
||+++|||||+.+|..|..++.++|+.... ..++++++.|+++||+.+|+|++++++++++|+++.+||++|+++|+|.
T Consensus 300 d~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~~ip~~~~~~~~~~~ 379 (421)
T cd00833 300 DYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVIPPNLHFETPNPK 379 (421)
T ss_pred cEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHHHHHhcCCcCCcCCCCCCCCC
Confidence 999999999999999999999999987531 2458999999999999999999999999999999999999999999999
Q ss_pred CCCC----CCccccCCCC----CCcEEEeeccccccceeeeEe
Q 018323 320 FNDN----FMPLTASKDM----PISAALSNSFGFGGTNASLLF 354 (358)
Q Consensus 320 ~~~~----~~~~~~~~~~----~~~~~l~~~~g~gG~~~~~il 354 (358)
++++ +++ ++.+++ .++.+++|+|||||+|+|+||
T Consensus 380 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~sfgfgg~n~~~vl 421 (421)
T cd00833 380 IDFEESPLRVP-TEARPWPAPAGPRRAGVSSFGFGGTNAHVIL 421 (421)
T ss_pred CCcccCCeEee-CCCccCCCCCCCeEEEEeCcCCCCceeEEeC
Confidence 8753 333 333333 379999999999999999986
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. |
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-56 Score=418.21 Aligned_cols=330 Identities=34% Similarity=0.537 Sum_probs=283.0
Q ss_pred cchhhccCCHHHHHHHHHHHH---HHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhh
Q 018323 4 RGLILKSIARFIAYALCAADE---ALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRIL 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~l~~~aa~~---Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (358)
+....|++++..+++..|+++ |++|++- +. +.+|+||++|++.++....+..+..+.........++.++.+.
T Consensus 60 ~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~---~~-~~~r~gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (392)
T PRK09185 60 PAALAAFDCRNNRLALLALQQIEPAVEAAIA---RY-GADRIGVVLGTSTSGILEGELAYRRRDPAHGALPADYHYAQQE 135 (392)
T ss_pred CHHHHhcCCHHHHHHHHHHHHHHHHHHhhcc---cC-CCCcEEEEEeeCCccHHHHHHHHHHHhhccCCCCCchhhhhhc
Confidence 344567788888887777666 5656552 22 3678999999999998888777665443222223467778888
Q ss_pred hhHHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCC
Q 018323 81 INMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 160 (358)
Q Consensus 81 ~~~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~ 160 (358)
.+.++++|++.||++||+++++++|+|++.||..|+++|++|++|.|||+|+|. ..+..+..|...+.++ .+
T Consensus 136 ~~~~a~~ia~~lgl~Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~-~~~~~~~~~~~~~~l~-------~~ 207 (392)
T PRK09185 136 LGSLADFLRAYLGLSGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDS-LCRLTLNGFNSLESLS-------PQ 207 (392)
T ss_pred ccHHHHHHHHHhCCCCCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccc-cChHHHHHHHhccccC-------CC
Confidence 899999999999999999999999999999999999999999999999999997 4555556666666554 36
Q ss_pred CCCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 018323 161 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQV 240 (358)
Q Consensus 161 ~~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~di 240 (358)
.|+|||.+++|+++|||++++||+++ ++. .++|.|++.++|+.+...|++...++.++++++|+++|++|+||
T Consensus 208 ~~~Pfd~~~~G~~~gEGaa~vVLe~~-----~~~--~~~I~g~g~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agl~~~dI 280 (392)
T PRK09185 208 PCRPFSANRDGINIGEAAAFFLLERE-----DDA--AVALLGVGESSDAHHMSAPHPEGLGAILAMQQALADAGLAPADI 280 (392)
T ss_pred ccCCCcCCCCccceeceEEEEEEEEc-----CCC--cEEEEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHc
Confidence 79999999999999999999999987 222 25799999999998887788888888999999999999999999
Q ss_pred cEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Q 018323 241 DYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF 320 (358)
Q Consensus 241 d~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~ 320 (358)
||+++|||||+.+|..|..++.++|+.. +|+++.|+++||+++|||++++++++++|+++++||++|+++++|++
T Consensus 281 d~v~~hgtgt~~~D~~E~~al~~~f~~~-----~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~ 355 (392)
T PRK09185 281 GYINLHGTATPLNDAMESRAVAAVFGDG-----VPCSSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPAL 355 (392)
T ss_pred cEEEeCCCCCcCCCHHHHHHHHHHhCCC-----CceeCCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Confidence 9999999999999999999999999753 68999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 321 NDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
+++.++ .+.+..+++++++|||||||+|+++||++.+
T Consensus 356 ~~~~~~-~~~~~~~~~~~l~~s~gfgG~n~~lvl~~~~ 392 (392)
T PRK09185 356 PPLYLV-ENAQALAIRYVLSNSFAFGGNNCSLIFGRAD 392 (392)
T ss_pred CccccC-CCCccCCCCEEEEeCccCCceeEEEEEEeCC
Confidence 988777 5556667899999999999999999999864
|
|
| >PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-55 Score=410.98 Aligned_cols=315 Identities=20% Similarity=0.236 Sum_probs=274.0
Q ss_pred hhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHH------------HHHHHHhcccCCCCc
Q 018323 7 ILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDA------------AQMICEKRLRRLSPF 74 (358)
Q Consensus 7 ~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~------------~~~~~~~~~~~~~~~ 74 (358)
..|+||+.++|++.|+++||+|||++..+. +.+|+||++|++.+.....+.. ...+.+.+.+.++|+
T Consensus 66 ~~r~~~r~~~~a~~Aa~~Al~dAGl~~~~~-~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 144 (398)
T PRK06519 66 DQRQMETWQRLGTYAAGLALDDAGIKGNEE-LLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPT 144 (398)
T ss_pred hhhccCHHHHHHHHHHHHHHHHcCCCCCCC-CccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChh
Confidence 568999999999999999999999975433 3679999999999887665432 234455667789999
Q ss_pred chhhhhhhHHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhccccccc
Q 018323 75 FIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKY 154 (358)
Q Consensus 75 ~~~~~~~~~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~ 154 (358)
+++.+++|.++++|++.||++||+++++++|+|++.||.+|+++|++|++|++||+|+|...++..+..|...+.++.
T Consensus 145 ~~~~~~~n~~a~~is~~~gl~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~-- 222 (398)
T PRK06519 145 LFLAQLSNLLAGNISIVHKVTGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLK-- 222 (398)
T ss_pred hhhhhhhhHHHHHHHHHhCCCCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCC--
Confidence 999999999999999999999999999999999999999999999999999999999999888888888888887762
Q ss_pred CCCCCCCCCC-CcC---CCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHH
Q 018323 155 NGTPQEASRP-FDC---GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRAL 230 (358)
Q Consensus 155 ~~~~~~~~~p-f~~---~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al 230 (358)
..++| ||. +++||++|||++++|||++++|+++|.++|++|.|++...+ +. ...++.++|++||
T Consensus 223 -----~~~~p~~d~~~~~r~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~~------~~-~~~~~~~am~~AL 290 (398)
T PRK06519 223 -----GGWAPVWSRGGEDGGGFILGSGGAFLVLESREHAEARGARPYARISGVESDRA------RR-APGDLEASLERLL 290 (398)
T ss_pred -----CCCCchhccCccCCCCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEEeecCC------CC-ChHHHHHHHHHHH
Confidence 34455 555 69999999999999999999999999999999999964322 11 2357889999999
Q ss_pred HHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCC
Q 018323 231 KQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLT 310 (358)
Q Consensus 231 ~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~ 310 (358)
++||+ ++|||||+.|||||+.+|..|..+++++|+ .||+++|+++||+++|+|+++++.++++|++|++||+
T Consensus 291 ~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~-------~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~g~vpp~ 362 (398)
T PRK06519 291 KPAGG-LAAPTAVISGATGAHPATAEEKAALEAALA-------GPVRGIGTLFGHTMEAQFPLGLALAALSVSKGALFPP 362 (398)
T ss_pred HHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcC-------CCccccchhhccchHHHHHHHHHHHHHHHhcCccCCC
Confidence 99999 899999999999999999999999999994 4799999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 311 LNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
+|++ |+ .++..+.+.++++++|++|.-.-.+++.
T Consensus 363 ~n~~---~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (398)
T PRK06519 363 FDAS---GE---------KPMSGAAREAVVTTVGHWRGEGMALVEA 396 (398)
T ss_pred CCCC---cc---------cCccccccEEEEEeeccCCcceeEEEEe
Confidence 9972 21 2345667999999999999877666654
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-53 Score=409.32 Aligned_cols=332 Identities=24% Similarity=0.385 Sum_probs=300.2
Q ss_pred CccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhh
Q 018323 2 RTRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILI 81 (358)
Q Consensus 2 ~~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (358)
-..+++...|||+.||.+++.+||+-||||+|+++ +++++|||+|.+..+.... +.+.+..+..|...+...
T Consensus 75 ~vh~KQa~~MDPq~RlLLE~t~EAivDaGiNP~~L-RGs~tGv~vg~s~seTs~~-------~~~dp~t~~Gy~mtgc~r 146 (2376)
T KOG1202|consen 75 GVHPKQANTMDPQLRLLLEATWEAIVDAGINPDDL-RGSRTGVFVGVSGSETSGA-------LSQDPDTVNGYSMTGCVR 146 (2376)
T ss_pred CcCcccccccCHHHHHHHHHHHHHHHhCCCChhhc-CcccceeEEeecCcccccc-------ccCCCccccceeecccHH
Confidence 34678888999999999999999999999999998 5999999999987665432 223455667788888899
Q ss_pred hHHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCC
Q 018323 82 NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 161 (358)
Q Consensus 82 ~~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 161 (358)
.+++.||++.|+++||++.++++|+|++.||..|.+.|+.|+||.+||.|+...+.|.....|.+++.++ +++.
T Consensus 147 aMfaNRiSytFDfqGPS~s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls------~dGs 220 (2376)
T KOG1202|consen 147 AMFANRISYTFDFQGPSFSVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLS------PDGS 220 (2376)
T ss_pred HHhhcceeEEEeccCCchhhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcC------CCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 7899
Q ss_pred CCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCC---CCCCCCChHHHHHHHHHHHHHcCCCCC
Q 018323 162 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH---ITQPHIDGKGAILAMTRALKQSGLQSH 238 (358)
Q Consensus 162 ~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~---~~~~~~~~~~~~~~~~~al~~agl~~~ 238 (358)
|+.||...+||.++||.++++|.+...|++ +||.|.-...++||+. .+.| ++..+...+++.|+++|+.|+
T Consensus 221 CkaFDeagnGY~Rseg~~avllqrk~~ArR----vYAtilnartNTDGfKEqGvTfP--~G~~Q~qLi~e~Yse~Gl~P~ 294 (2376)
T KOG1202|consen 221 CKAFDEAGNGYCRSEGVVAVLLQRKSLARR----VYATILNARTNTDGFKEQGVTFP--SGDMQEQLIRETYSEAGLNPE 294 (2376)
T ss_pred ccchhccCCceeecCceEEEEEehhHHHHH----HHHHhhccccCCCchhhcCccCC--CcHHHHHHHHHHHHhcCCCcc
Confidence 999999999999999999999999988875 6888898999999964 4555 678889999999999999999
Q ss_pred CccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCC
Q 018323 239 QVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDP 318 (358)
Q Consensus 239 did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~ 318 (358)
++-|||+|||||+.+|+-|+.++.++|+.. +..++-++++|+++||++.|||+..+.+.+++|++|.|||++|+..|+|
T Consensus 295 sv~YvEAHGtGTkVGDpQEaN~it~~fC~~-Rt~pLLIGSvKSNMGHaEPASGv~alaKillsmE~glip~NLHy~tPNp 373 (2376)
T KOG1202|consen 295 SVVYVEAHGTGTKVGDPQEANGITRFFCAT-RTTPLLIGSVKSNMGHAEPASGVCALAKILLSMEEGLIPPNLHYNTPNP 373 (2376)
T ss_pred cEEEEEeccCCCCCCChHHhhhHHHHHhhc-CCCceEeeeccccCCCCCccchHHHHHHHHHHHHhCcCCCccccCCCCC
Confidence 999999999999999999999999999983 4467889999999999999999999999999999999999999999999
Q ss_pred CCCC------CCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 319 IFND------NFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 319 ~~~~------~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
.++- ..| .++.+++.....+|||||||.|+|+||+.
T Consensus 374 ~ip~L~dGrLkVV--d~~lp~~GGivGiNSFGFGGsN~HviLks 415 (2376)
T KOG1202|consen 374 EIPALVDGRLKVV--DRPLPWRGGIVGINSFGFGGSNAHVILKS 415 (2376)
T ss_pred CcchhccceeEEe--cCCCCccCceeeeeccccCCCceeEEecc
Confidence 9852 233 35566778899999999999999999986
|
|
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-43 Score=325.78 Aligned_cols=322 Identities=35% Similarity=0.513 Sum_probs=271.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
.++|+++|+++||++||++++.. ..+..+++++++.+...... ........+.|+.+.+.+.+..+++|+..+|
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~-~~~i~~ii~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 84 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQ-KNPIVGVVVGTGGGSPRFQV-----FGADAMRAVGPYVVTKAMFPGASGQIATPLG 84 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCcccc-CCCCEEEEEEeCCccHHHHh-----hhhccccccCcchhhcccchHHHHHHHHHhC
Confidence 57899999999999999983322 13445999999876654322 2233455778888999999999999999999
Q ss_pred CCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCcee
Q 018323 94 FQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFV 173 (358)
Q Consensus 94 l~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g~~ 173 (358)
+++|+++++.+|+|++.||..|+++|++|++|.+||+++|....+............ .++..++||+...+|++
T Consensus 85 l~g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~ 158 (332)
T cd00825 85 IHGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALS------TPEKASRTFDAAADGFV 158 (332)
T ss_pred CCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhcccc------CCCCCCCCCCCCCCCEE
Confidence 999999999999999999999999999999999999999987666544332222222 25677899999999999
Q ss_pred eecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC
Q 018323 174 IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG 253 (358)
Q Consensus 174 ~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~ 253 (358)
+|||++++||++++.|++++.+++++|.++....++.+...+.+......++++++|+++|++++|||++++|+++++..
T Consensus 159 ~gdGaaA~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~ 238 (332)
T cd00825 159 FGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIG 238 (332)
T ss_pred EEeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCC
Confidence 99999999999999999999999999999998888765544444567888999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCC
Q 018323 254 DTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDM 333 (358)
Q Consensus 254 d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~ 333 (358)
|..|..++...++.. ++++.+.|..+||+.+|++++.++++++.++++.+||++|+.++++ +.+.+. .+.+..
T Consensus 239 ~~~e~~~~~~~~~~~----~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~~~p~~~~~~~~~~--~~~~~~-~~~~~~ 311 (332)
T cd00825 239 DVKELKLLRSEFGDK----SPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDE--AGLNIV-TETTPR 311 (332)
T ss_pred CHHHHHHHHHHhCCC----CceeECCCcccccchhHhHHHHHHHHHHHHhcCccCCCCCCCCCCc--ccCccc-CCCCCC
Confidence 999999988877543 4788999999999999999999999999999999999999999988 333333 344556
Q ss_pred CCcEEEeeccccccceeeeEe
Q 018323 334 PISAALSNSFGFGGTNASLLF 354 (358)
Q Consensus 334 ~~~~~l~~~~g~gG~~~~~il 354 (358)
+.+.++++++|+||+++++||
T Consensus 312 ~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 312 ELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred CCCEEEEeeecCCCeeEEEeC
Confidence 789999999999999999986
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=282.49 Aligned_cols=277 Identities=19% Similarity=0.201 Sum_probs=221.2
Q ss_pred CCHHHHHHHHHHHHHHHHCC-CCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHH
Q 018323 11 IARFIAYALCAADEALHDAK-WLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVS 89 (358)
Q Consensus 11 ~~~~~~l~~~aa~~Al~dAG-~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia 89 (358)
..+..+|+..|+++||++++ ++++ ++.++++.+..+. ...+. .+.+..+..++
T Consensus 62 ~~r~~~La~~Al~~aL~~a~~~~~~------~i~lil~~~~~~~----------------~~~~~----~~~~~~~~~~~ 115 (348)
T PRK06147 62 PERLAEMAAPAIAEALEGLPALDAS------EAPLLLCVAEEER----------------PGRPP----DLEERLLRELE 115 (348)
T ss_pred hHHHHHHHHHHHHHHHHhccccccc------CCcEEEEeCchhc----------------CCCCc----chHHHHHHHHH
Confidence 35678899999999999998 4443 3467776543110 00111 11223456788
Q ss_pred HHcCC--CCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcC
Q 018323 90 MKYGF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC 167 (358)
Q Consensus 90 ~~lgl--~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~ 167 (358)
..+|+ ++++++|+++|+|++.||..|+++|++|++|.+||+|+|.++.+..+..+...+.+.. +.
T Consensus 116 ~~lG~~~~~~~~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~-------------~~ 182 (348)
T PRK06147 116 ARLGLRLEPGSAVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLT-------------SQ 182 (348)
T ss_pred HHhCCCCCCCcccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCC-------------CC
Confidence 88887 4688999999999999999999999999999999999999888776666665544431 23
Q ss_pred CCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCC-CCCChHHHHHHHHHHHHHcCCCCCCccEEEec
Q 018323 168 GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQ-PHIDGKGAILAMTRALKQSGLQSHQVDYVNAH 246 (358)
Q Consensus 168 ~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~-~~~~~~~~~~~~~~al~~agl~~~did~i~~h 246 (358)
+++|+++|||++++||++.+.|++++.++|+ .|++...++.+... +...+.++.++++++|+++|++++|||||+.|
T Consensus 183 ~~~G~v~GEGA~a~vLe~~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah 260 (348)
T PRK06147 183 NSNGFIPGEAAAAVLLGRPAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIAD 260 (348)
T ss_pred CCCceeeeceEEEEEEccHhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcC
Confidence 6899999999999999999999999999998 66666666543332 22367899999999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCc
Q 018323 247 ATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMP 326 (358)
Q Consensus 247 ~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~ 326 (358)
++||+.+|..|..++.++|+... ...+++++|+++||+++|+|+++++.++++|++|++|+.
T Consensus 261 ~~gt~~~d~~e~~A~~~~f~~~~--~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~---------------- 322 (348)
T PRK06147 261 LNGEQYRFKEAALAEMRLFRVRK--EFFDLWHPAECIGEIGAAIGPALLGVALAASRKGYGPGP---------------- 322 (348)
T ss_pred CCCCccchHHHHHHHHHHhhhcc--CCCceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCC----------------
Confidence 99999999999999999998643 346899999999999999999999999999999998742
Q ss_pred cccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 327 LTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 327 ~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
.+|+.+..-.|.-+++||++
T Consensus 323 ----------~~L~~s~~d~g~r~a~~l~~ 342 (348)
T PRK06147 323 ----------NVLCHLSDDDGARAALVLEY 342 (348)
T ss_pred ----------cEEEEecCCCCceEEEEEec
Confidence 35666666677777777764
|
|
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-33 Score=247.70 Aligned_cols=247 Identities=35% Similarity=0.478 Sum_probs=214.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
..+|+.+|+++||+++|+++++++ ++++++..++. ..+..+.+|+..+|
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~-----~li~~~~~~~~--------------------------~~~~~a~~i~~~lg 55 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIV-----GVIVGTTGGSG--------------------------EFSGAAGQLAYHLG 55 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCce-----EEEEEECCCCc--------------------------cccHHHHHHHHHhC
Confidence 578999999999999999988887 99999876432 13567889999999
Q ss_pred C-CCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCce
Q 018323 94 F-QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 172 (358)
Q Consensus 94 l-~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g~ 172 (358)
+ ++|+++++.+|+|++.||..|+++|++|++|.+||+++|. +
T Consensus 56 ~~~~~~~~i~~~C~s~~~al~~A~~~i~~g~~~~~lv~~~e~-------------------------------------~ 98 (254)
T cd00327 56 ISGGPAYSVNQACATGLTALALAVQQVQNGKADIVLAGGSEE-------------------------------------F 98 (254)
T ss_pred CCCCCcceeccHhHHHHHHHHHHHHHHHCCCCCEEEEEecce-------------------------------------e
Confidence 9 7899999999999999999999999999999999999986 5
Q ss_pred eeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q 018323 173 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 252 (358)
Q Consensus 173 ~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~ 252 (358)
.+|||++++||++++.+.+++.+++.+|.++....++.... +........++++++|+++|++++|||++++|.+++..
T Consensus 99 ~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~ 177 (254)
T cd00327 99 VFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMV-PAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPI 177 (254)
T ss_pred eecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCCC-CCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCcc
Confidence 68999999999999999999999999999988776654322 23356788899999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCC
Q 018323 253 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD 332 (358)
Q Consensus 253 ~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~ 332 (358)
.|..|.......+... .+++...+..+||+.+++++..+.+++.+++.+.+||. .
T Consensus 178 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~---------------------~ 232 (254)
T cd00327 178 GDAVELALGLDPDGVR----SPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPT---------------------P 232 (254)
T ss_pred ccHHHHHHHHHHhCCC----CCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCC---------------------C
Confidence 9999887765554332 36889999999999999999999999999999999871 1
Q ss_pred CCCcEEEeeccccccceeeeEe
Q 018323 333 MPISAALSNSFGFGGTNASLLF 354 (358)
Q Consensus 333 ~~~~~~l~~~~g~gG~~~~~il 354 (358)
.+.+.++++++|+||+++++||
T Consensus 233 ~~~~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 233 REPRTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred CCcCEEEEeeEcCCCcceEEEC
Confidence 3357899999999999999986
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=239.81 Aligned_cols=287 Identities=19% Similarity=0.197 Sum_probs=202.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+|||++++++| ++++++..... . ...++..++..+
T Consensus 20 ~~~eLa~~A~~~AL~dAgi~~~dID-----~vi~g~~~~~~--------------------~------~~~~a~~v~~~l 68 (385)
T PRK12578 20 SVQELAWESIKEALNDAGVSQTDIE-----LVVVGSTAYRG--------------------I------ELYPAPIVAEYS 68 (385)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccccc--------------------c------cCChHHHHHHHh
Confidence 3578999999999999999999998 88888754110 0 012355789999
Q ss_pred CCCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHH-----------Hh--hh-----------
Q 018323 93 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAG-----------FC--KS----------- 147 (358)
Q Consensus 93 gl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~-----------~~--~~----------- 147 (358)
|+++ +.++|+++|+|++.||..|++.|++|.+|++||+|+|.+........ +. ..
T Consensus 69 Gl~~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~ 148 (385)
T PRK12578 69 GLTGKVPLRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALY 148 (385)
T ss_pred CCCCCCeeEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHH
Confidence 9986 77899999999999999999999999999999999997543211000 00 00
Q ss_pred -cccccccCC------------------CCCCC----------------CCCCcCCCCceeeecceEEEEeccHHHHHhc
Q 018323 148 -RALTTKYNG------------------TPQEA----------------SRPFDCGRDGFVIGEGSGVLVLEELEHAKKR 192 (358)
Q Consensus 148 -~~l~~~~~~------------------~~~~~----------------~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~ 192 (358)
......+.. +|... ..|+ ...+...++|||+++||++++.|+++
T Consensus 149 a~~~m~~~g~t~e~~a~va~~~~~~A~~np~a~~~~~i~~e~v~~s~~i~~Pl-~~~d~~~~~DGAaA~vl~s~e~A~~l 227 (385)
T PRK12578 149 ATRHMAVYGTTEEQMALVSVKAHKYGAMNPKAHFQKPVTVEEVLKSRAISWPI-KLLDSCPISDGSATAIFASEEKVKEL 227 (385)
T ss_pred HHHHHHHhCcCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCccCCCc-cHhhcCCcCCCeEEEEEecHHHHHhc
Confidence 000000000 01100 0111 11233348999999999999999999
Q ss_pred CCeeeEEEEeeeeecCCCCCC-CCCCCh-HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHH-hhcc-
Q 018323 193 GAKIYAEVRGYGMSGDAHHIT-QPHIDG-KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV-FSDH- 268 (358)
Q Consensus 193 g~~~~a~i~g~~~~~~~~~~~-~~~~~~-~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~-~~~~- 268 (358)
+.++.++|+|++...+..+.. .|+... .....+++++|+++|++++|||++|+|.+.+.. |...++.+ |+.+
T Consensus 228 ~~~~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei~d~ft~~----~l~~le~lGl~~~G 303 (385)
T PRK12578 228 KIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEVATVHDAFTIA----EIMGYEDLGFTEKG 303 (385)
T ss_pred CCCCCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH----HHHHHHHcCCCCCC
Confidence 866778999999887655432 233222 356689999999999999999999999877744 77777765 2222
Q ss_pred -----------cCCCCcceecccCC--cCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCC-C
Q 018323 269 -----------ATSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDM-P 334 (358)
Q Consensus 269 -----------~~~~~~~v~~~k~~--~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~-~ 334 (358)
..++++|+|...+. +|||.+|+|+.+++++++||+...- ..+.. .
T Consensus 304 ~~~~~~~~G~~~~~G~~pvN~~GG~la~GhP~gatG~~~v~e~~~qLrg~ag---------------------~~qv~~~ 362 (385)
T PRK12578 304 KGGKFIEEGQSEKGGKVGVNLFGGLKAKGHPLGATGLSMIYEITKQLRDEAG---------------------KLQQPLK 362 (385)
T ss_pred chHHHHHCCCccCCCCeeeCCCCCcccCCCCccHHHHHHHHHHHHHHhCCcc---------------------cCcCCcc
Confidence 22466899999994 5999999999999999999997431 11112 2
Q ss_pred CcEEEeeccc-cccceeeeEeee
Q 018323 335 ISAALSNSFG-FGGTNASLLFTK 356 (358)
Q Consensus 335 ~~~~l~~~~g-~gG~~~~~il~~ 356 (358)
.+++|+++.| .|.++.++||+|
T Consensus 363 ~~~~l~~~~Gg~~~~~~~~v~~~ 385 (385)
T PRK12578 363 KYIGLVHNVGGTGHFAYVMILRR 385 (385)
T ss_pred hheEEEeccCcchhhEEEEEEeC
Confidence 4688888887 555666677764
|
|
| >PRK06064 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-29 Score=234.49 Aligned_cols=291 Identities=21% Similarity=0.298 Sum_probs=204.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
+...|+.+|+++||+|+|+++++++ ++++|+..++... . ....+..++..+
T Consensus 21 ~~~eLa~~a~~~Al~dagl~~~~Id-----~vi~g~~~~~~~~----------------------~--~~~~a~~va~~l 71 (389)
T PRK06064 21 SLRDLAVEAGLEALEDAGIDGKDID-----AMYVGNMSAGLFV----------------------S--QEHIAALIADYA 71 (389)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccccccc----------------------c--cccHHHHHHHHc
Confidence 4588999999999999999998887 8888875422110 0 012466789999
Q ss_pred CCC-CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHH--HH-H--------Hhh---------h----
Q 018323 93 GFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS--MA-G--------FCK---------S---- 147 (358)
Q Consensus 93 gl~-gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~--~~-~--------~~~---------~---- 147 (358)
|++ .|.++++++|+|++.||..|+++|++|++|++||+|.|.+..... .. . +.. .
T Consensus 72 Gl~~~~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a 151 (389)
T PRK06064 72 GLAPIPATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIA 151 (389)
T ss_pred CCCCCCeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHH
Confidence 998 599999999999999999999999999999999999986432110 00 0 000 0
Q ss_pred cccccccCC------------------CCCC----------------CCCCCcCCCCceeeecceEEEEeccHHHHHhcC
Q 018323 148 RALTTKYNG------------------TPQE----------------ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRG 193 (358)
Q Consensus 148 ~~l~~~~~~------------------~~~~----------------~~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g 193 (358)
....+.++. .|.. .+.|+. ..+...++|||+++||++++.|++++
T Consensus 152 ~~~~~~yG~s~e~~a~~a~~~~~~A~~np~a~~~~~~t~~~~~~s~~i~~Pl~-~~d~~~~~dGAaa~vL~s~~~A~~~~ 230 (389)
T PRK06064 152 RRYMHKYGTTEEDLALVAVKNHYNGSKNPYAQFQKEITVEQVLNSPPVADPLK-LLDCSPITDGAAAVILASEEKAKEYT 230 (389)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHhhCcHhhhCCCCCHHHHhcCCcccCCCc-hhhcCCCCCcceEEEEecHHHHHHhc
Confidence 000000000 0000 011111 22344689999999999999999987
Q ss_pred CeeeEEEEeeeeecCCCCCCC-CCC-ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHH-hhccc-
Q 018323 194 AKIYAEVRGYGMSGDAHHITQ-PHI-DGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV-FSDHA- 269 (358)
Q Consensus 194 ~~~~a~i~g~~~~~~~~~~~~-~~~-~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~-~~~~~- 269 (358)
.++ ++|.|++...+..+... ++. .......+++++|+++||+++|||++|+|++++.. +...++.+ |+.+.
T Consensus 231 ~~~-v~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e~~d~ft~~----~~~~~e~lgl~~~G~ 305 (389)
T PRK06064 231 DTP-VWIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFTIA----EILAYEDLGFAKKGE 305 (389)
T ss_pred CCC-eEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCCCcHH----HHHHHHHcCCCCCCc
Confidence 665 59999998877654322 221 34566789999999999999999999999998874 55555555 32211
Q ss_pred -----------CCCCcceecccCC--cCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCc
Q 018323 270 -----------TSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPIS 336 (358)
Q Consensus 270 -----------~~~~~~v~~~k~~--~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (358)
.++++|+|..++. +||+.+++|+..++++++||+++.. . ...+-.+.+
T Consensus 306 ~~~~~~~g~~~~~g~~pvN~~GG~l~~Ghp~~a~G~~~~~e~~~qL~g~a~------------------~-g~rqv~~a~ 366 (389)
T PRK06064 306 GGKLAREGQTYIGGDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLRGEAE------------------K-GRQQVIGAG 366 (389)
T ss_pred hHHHHHCCCccCCCCeeecCCCCcccCCCCcchhHHHHHHHHHHHHhCCCC------------------C-CCccCCCcc
Confidence 1346799999996 6999999999999999999998520 0 111233468
Q ss_pred EEEeeccc-cccceeeeEeeec
Q 018323 337 AALSNSFG-FGGTNASLLFTKC 357 (358)
Q Consensus 337 ~~l~~~~g-~gG~~~~~il~~~ 357 (358)
.++++++| .+.+++.+||++.
T Consensus 367 ~~l~~~~g~~~~~~~~~vl~~~ 388 (389)
T PRK06064 367 YGLTHNVGGTGHTAVVHILSRK 388 (389)
T ss_pred EEEEecCCCccceEEEEEEEec
Confidence 89998887 3456677777763
|
|
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-29 Score=235.81 Aligned_cols=272 Identities=21% Similarity=0.300 Sum_probs=202.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+|+|++++++| .|++|+..... .. ...+..++..+|
T Consensus 26 ~~~La~~A~~~AL~~agl~~~dID-----~vi~g~~~~~~-------------------------~~-~~~a~~va~~lG 74 (393)
T PRK05656 26 AVELGAAVIRRLLEQTGLDPAQVD-----EVILGQVLTAG-------------------------AG-QNPARQAAIKAG 74 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEEecCCC-------------------------CC-CcHHHHHHHHcC
Confidence 478999999999999999999998 89998754110 01 124566889999
Q ss_pred CC--CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHH----------------HHHH------hhh-c
Q 018323 94 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS----------------MAGF------CKS-R 148 (358)
Q Consensus 94 l~--gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~----------------~~~~------~~~-~ 148 (358)
+. -|+++|+.+|+|++.++..|+++|++|.+|++||+|+|.++..+. +..+ ... +
T Consensus 75 l~~~~p~~~V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (393)
T PRK05656 75 LPHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFND 154 (393)
T ss_pred CCCCcceEEecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccccC
Confidence 97 389999999999999999999999999999999999997654210 0000 000 0
Q ss_pred --------ccccccCC-------------------CCCCCC----CCCcC------------------------------
Q 018323 149 --------ALTTKYNG-------------------TPQEAS----RPFDC------------------------------ 167 (358)
Q Consensus 149 --------~l~~~~~~-------------------~~~~~~----~pf~~------------------------------ 167 (358)
.+...++. .+.... .|+..
T Consensus 155 ~~~a~~a~~~~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p 234 (393)
T PRK05656 155 YHMGITAENLVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLKP 234 (393)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccCCCCceEeccCCCCCCCCCHHHHhcCCC
Confidence 00000000 000000 01100
Q ss_pred --CCCcee-------eecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 018323 168 --GRDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSH 238 (358)
Q Consensus 168 --~~~g~~-------~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~ 238 (358)
..+|.+ ++|||+++||++++.|++++.+++++|.|++.... .|+....+...+++++|+++|++|+
T Consensus 235 ~~~~~g~lt~~~~s~~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~agl~~~ 309 (393)
T PRK05656 235 AFKKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGV-----DPAIMGIGPVSATRRCLDKAGWSLA 309 (393)
T ss_pred CcCCCCCEEccccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecC-----CCcccchhHHHHHHHHHHHcCCCHH
Confidence 022334 89999999999999999999999999999987652 4444556778899999999999999
Q ss_pred CccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCC
Q 018323 239 QVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDP 318 (358)
Q Consensus 239 did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~ 318 (358)
|||++|+|.+ +..|..++.+.|+... .+++++..|..+||+.+|+|+..+++++++|+.
T Consensus 310 dId~~e~~d~-----f~~~~~~~~e~lg~~~--~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~~-------------- 368 (393)
T PRK05656 310 ELDLIEANEA-----FAAQSLAVGKELGWDA--AKVNVNGGAIALGHPIGASGCRVLVTLLHEMIR-------------- 368 (393)
T ss_pred HCCEEEecCc-----cHHHHHHHHHHhCCCC--ccCCcCCCHHHhCccHHHHHHHHHHHHHHHHHH--------------
Confidence 9999999953 4456666677776432 356777788899999999999999999998863
Q ss_pred CCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 319 IFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
.+.++++++...-||...++|||+
T Consensus 369 --------------~~~~~gl~~~c~~gG~g~a~~~e~ 392 (393)
T PRK05656 369 --------------RDAKKGLATLCIGGGQGVALAIER 392 (393)
T ss_pred --------------cCCCEEEEEEcccCcceEEEEEec
Confidence 235889999999999999999986
|
|
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=233.06 Aligned_cols=269 Identities=24% Similarity=0.322 Sum_probs=195.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+|+|+++++|| ++++++..+... ....+..++..+|
T Consensus 22 ~~~La~~A~~~AL~dAgl~~~dID-----~vi~~~~~~~~~--------------------------~~~~a~~v~~~lG 70 (386)
T cd00751 22 ADDLGAAVIKALLERAGLDPEEVD-----DVIMGNVLQAGE--------------------------GQNPARQAALLAG 70 (386)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCC-----EEEEEeccCCCC--------------------------CChHHHHHHHHcC
Confidence 588999999999999999999998 888886542210 1123557889999
Q ss_pred CCC--CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHH---H---H---------hhhcc-------
Q 018323 94 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA---G---F---------CKSRA------- 149 (358)
Q Consensus 94 l~g--p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~---~---~---------~~~~~------- 149 (358)
++. |.++|+++|+|++.+|..|+++|++|.+|+|||+|+|.++...... . + ...+.
T Consensus 71 l~~~~~~~~v~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (386)
T cd00751 71 LPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGL 150 (386)
T ss_pred CCCCCchhhhccccHHHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCCC
Confidence 974 8999999999999999999999999999999999998753211000 0 0 00000
Q ss_pred --------cccccCC-------------------------------------------CCCCCCC------------CC-
Q 018323 150 --------LTTKYNG-------------------------------------------TPQEASR------------PF- 165 (358)
Q Consensus 150 --------l~~~~~~-------------------------------------------~~~~~~~------------pf- 165 (358)
...+++. .++...+ |.
T Consensus 151 ~~a~~a~~~~~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~r~~~t~e~v~~s~~i~ 230 (386)
T cd00751 151 SMGITAENVAEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPAF 230 (386)
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCc
Confidence 0000000 0000011 11
Q ss_pred c-----CCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 018323 166 D-----CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQV 240 (358)
Q Consensus 166 ~-----~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~di 240 (358)
+ ...+...++||++++||++++.|++++.+++++|+|++..++.. .....+...+++++|+++||+|+||
T Consensus 231 ~p~g~l~~~d~~~~~dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~-----~~~~~~~~~a~~~a~~~Agi~~~di 305 (386)
T cd00751 231 KKDGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDP-----AIMGIGPVPAIPKALKRAGLTLDDI 305 (386)
T ss_pred CCCCcEeCCcCCCCCcceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCC-----cccchhHHHHHHHHHHHcCCCHHHc
Confidence 1 11223347999999999999999999999999999999887532 2233456789999999999999999
Q ss_pred cEEEecCCCCCCCcHHHHHHHHHHhhcccCCC-CcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCC
Q 018323 241 DYVNAHATSTPLGDTVEATAIRTVFSDHATSG-SLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPD 317 (358)
Q Consensus 241 d~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~-~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~ 317 (358)
|++|+| |.+++..++..+..+. ..|++...+ ++||+.+++|+.+++++++||+..
T Consensus 306 d~~e~~----------d~f~~~~~~~~e~lg~~~~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL~g~------------ 363 (386)
T cd00751 306 DLIEIN----------EAFAAQALACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLHELKRR------------ 363 (386)
T ss_pred CEEEee----------chhHHHHHHHHHHhCCChhhcCCCcchHhhCccHHHHHHHHHHHHHHHHHhc------------
Confidence 999999 5555544443322111 135665555 789999999999999999999862
Q ss_pred CCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 318 PIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
..+++|++..+-||..+++|||+
T Consensus 364 ----------------~~~~gl~~~~~~gg~g~~~~ie~ 386 (386)
T cd00751 364 ----------------GGRYGLATMCIGGGQGAAMVIER 386 (386)
T ss_pred ----------------CCCEEEEEEcccccceEEEEEEC
Confidence 24889999999999999999985
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=226.50 Aligned_cols=177 Identities=39% Similarity=0.634 Sum_probs=145.3
Q ss_pred CccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC-cEEEEEecCCCChHHHHHHHHHHHHhc--ccCCCCcchhh
Q 018323 2 RTRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKE-RTGVSIGGGIGSISDTVDAAQMICEKR--LRRLSPFFIPR 78 (358)
Q Consensus 2 ~~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~-~~gv~~g~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 78 (358)
++++++.++|+++++|++.++++||+|||++++.++ .. ++||++|++.+.+ .++..+...+ .....|+.++.
T Consensus 75 ~~~~~~~~~~~~~~~~~l~aa~~Al~dAg~~~~~~~-~~~r~gv~~G~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~ 149 (254)
T PF00109_consen 75 GIPPREARRMDRQSRLALAAAREALEDAGLDPDDLD-GERRVGVFVGSSSGDY----EFYRALDEDGETPRDVSPWFVPN 149 (254)
T ss_dssp CHHHHHHHTS-HHHHHHHHHHHHHHHHHTSTGGGHT-GGGTEEEEEEESSSHH----HHHHHHHHHTTCGGGSHTTHHHH
T ss_pred cccchhhhhhhhhhhHHHHHhhhhcccccccccccc-cccceeeccccccccc----cccccccccccccccccccccCc
Confidence 456667789999999999999999999999876553 44 5999999998833 3444444444 46667766666
Q ss_pred hhhhHHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCC
Q 018323 79 ILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTP 158 (358)
Q Consensus 79 ~~~~~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~ 158 (358)
+++|.++++|++.||++||+++++++|+|++.||..|+++|++|++|+|||+|+|...++..+..+...+.++ .
T Consensus 150 ~~~~~~a~~ia~~~gl~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s------~ 223 (254)
T PF00109_consen 150 TLPNSAAGRIAILFGLRGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALS------A 223 (254)
T ss_dssp HSTTHHHHHHHHHHTB-SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-------T
T ss_pred ccccccccchhhhcCCCCccccccccccccccccchhcccccccccccccccccccccccccccccccccccc------c
Confidence 7999999999999999999999999999999999999999999999999999999889999999999999776 3
Q ss_pred CCCCCCCcCCCCceeeecceEEEEeccHHHH
Q 018323 159 QEASRPFDCGRDGFVIGEGSGVLVLEELEHA 189 (358)
Q Consensus 159 ~~~~~pf~~~~~g~~~geGaaa~vL~~~~~A 189 (358)
++.++||+..++|+++|||+++|||+++++|
T Consensus 224 ~~~~~pf~~~~~G~v~gEGa~~~vLe~~~~A 254 (254)
T PF00109_consen 224 DGPCRPFDPFADGFVLGEGAGALVLERLEHA 254 (254)
T ss_dssp TSGGGSTBTTB-SB-BB-EEEEEEEEEHHHH
T ss_pred cccccccCCCCCCEEEECceEEEEEEEhhhC
Confidence 3679999999999999999999999999875
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B .... |
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=230.55 Aligned_cols=270 Identities=20% Similarity=0.295 Sum_probs=199.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.++.+++|+|+|++++++| .|++|+..+... ....+..++...|
T Consensus 27 ~~~L~~~a~~~al~~agi~~~~Id-----~vv~G~~~~~~~--------------------------g~~~~r~~~~~~G 75 (392)
T PRK06633 27 APMLAAHLIKDILQNSKIDPALVN-----EVILGQVITGGS--------------------------GQNPARQTLIHAG 75 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcC-----EEEEEecCcccc--------------------------ccHHHHHHHHHCC
Confidence 356889999999999999999998 899997542110 1134456778899
Q ss_pred CC-C-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcC-hHH-H-H---------H-----Hhhh-ccc---
Q 018323 94 FQ-G-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALS-M-A---------G-----FCKS-RAL--- 150 (358)
Q Consensus 94 l~-g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~-~~~-~-~---------~-----~~~~-~~l--- 150 (358)
+. + |+++|+++|+||+.|+..|++.|++|++|++||+|+|+++. |.. . . . +... ...
T Consensus 76 l~~~~p~~~V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (392)
T PRK06633 76 IPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGV 155 (392)
T ss_pred CCCCccchhhcchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchhcccccccCcchhhhhhcccccccccCcc
Confidence 97 3 99999999999999999999999999999999999998763 210 0 0 0 0000 000
Q ss_pred ---------ccccCC------------------CCC-----CCCCCCc-----------------------C--------
Q 018323 151 ---------TTKYNG------------------TPQ-----EASRPFD-----------------------C-------- 167 (358)
Q Consensus 151 ---------~~~~~~------------------~~~-----~~~~pf~-----------------------~-------- 167 (358)
...++. .+. ....|.. .
T Consensus 156 ~~a~~a~~~~~~~gitre~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~~ 235 (392)
T PRK06633 156 FMGITAENISKQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTTSLFDHDETVRPDTSLEILSKLRPAF 235 (392)
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccCCCceeeccCCCCCCCCCHHHHccCCCcc
Confidence 000000 000 0000110 0
Q ss_pred CCCc-------eeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 018323 168 GRDG-------FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQV 240 (358)
Q Consensus 168 ~~~g-------~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~di 240 (358)
...| -.++|||+++||++++.|++++.+++++|+|++...+ .|.........+++++|+++||+|+||
T Consensus 236 ~~~g~lt~~n~s~~sDGAaalvl~see~A~~~g~~p~a~I~g~~~~~~-----~~~~~~~~~~~a~~~Al~~AGl~p~DI 310 (392)
T PRK06633 236 DKNGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGV-----DPSIMGTAPVPASQKALSKAGWSVNDL 310 (392)
T ss_pred CCCCCEechhcCCccCceEEEEEecHHHHHHCCCCeeEEEEEEEEecC-----CcchhchHHHHHHHHHHHHcCCCHHHc
Confidence 0012 3389999999999999999999999999999998764 232233556789999999999999999
Q ss_pred cEEEecCCCCCCCcHHHHHHHHHHhhcccCC---CCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCC
Q 018323 241 DYVNAHATSTPLGDTVEATAIRTVFSDHATS---GSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPD 317 (358)
Q Consensus 241 d~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~---~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~ 317 (358)
|++|+| |.+++..+++.+..+ .+++++..|..+||+.+|||+.+++++++||++.
T Consensus 311 D~~ei~----------dafa~~~l~~~~~l~~~~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL~~~------------ 368 (392)
T PRK06633 311 EVIEVN----------EAFAAQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLITLIHGLRRA------------ 368 (392)
T ss_pred Ceeehh----------hHHHHHHHHHHhhhCCCccccCCCCchHhhCCcHHHHHHHHHHHHHHHHHhc------------
Confidence 999999 999999888654321 2455667777899999999999999999999751
Q ss_pred CCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 318 PIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
+.++.+++...-||...++||++.
T Consensus 369 ----------------~~~~g~~~~c~~gG~g~a~~~e~~ 392 (392)
T PRK06633 369 ----------------KAKKGLVTLCIGGGMGMAMCVEAV 392 (392)
T ss_pred ----------------CCCeEEEEEecccChhheEEEEeC
Confidence 246788889999999999999874
|
|
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.6e-28 Score=226.70 Aligned_cols=272 Identities=23% Similarity=0.286 Sum_probs=194.9
Q ss_pred HHHHHHHHHHHHHHHHC-CCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHH
Q 018323 13 RFIAYALCAADEALHDA-KWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 91 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dA-G~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 91 (358)
....|+.+|+++||+|+ |+++++|| .|++|+...... .....+..+...
T Consensus 30 s~~eLa~~A~~~AL~~a~gl~~~dID-----~vi~g~~~~~~~-------------------------~~~~~ar~~~~~ 79 (399)
T PRK09052 30 RPDDLLAHVLRSAVAQVPGLDPKLIE-----DAIVGCAMPEAE-------------------------QGLNVARIGALL 79 (399)
T ss_pred CHHHHHHHHHHHHHHhccCcCHHHCC-----EEEEEecCCCCC-------------------------CCchHHHHHHHH
Confidence 34889999999999997 99999998 999997642110 011222234555
Q ss_pred cCCCC--CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHH--------HHHhh---------h----c
Q 018323 92 YGFQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM--------AGFCK---------S----R 148 (358)
Q Consensus 92 lgl~g--p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~--------~~~~~---------~----~ 148 (358)
+|+.. |+++|+++|+|++.|+..|+++|++|++|++||+|+|.++..+.. ..+.. . .
T Consensus 80 ~Gl~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 159 (399)
T PRK09052 80 AGLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDENVGIAYGMGLTAE 159 (399)
T ss_pred cCCCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCcccccCcchhccCCcccccchHHHHHH
Confidence 68863 799999999999999999999999999999999999986543200 00000 0 0
Q ss_pred ccccccCC-----------------------------CCCCC--CC------------C-C--cC---------------
Q 018323 149 ALTTKYNG-----------------------------TPQEA--SR------------P-F--DC--------------- 167 (358)
Q Consensus 149 ~l~~~~~~-----------------------------~~~~~--~~------------p-f--~~--------------- 167 (358)
.+..+++. .+.+. .+ | + |.
T Consensus 160 ~~~~~ygitre~~d~~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~ 239 (399)
T PRK09052 160 KVAEQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLK 239 (399)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCHHHHhcCC
Confidence 00000100 01100 00 0 0 00
Q ss_pred ---CCCc-------eeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 018323 168 ---GRDG-------FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQS 237 (358)
Q Consensus 168 ---~~~g-------~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~ 237 (358)
..+| -.++|||+++||++++.|++++.+++++|.|++.... .|.....+...+++++|+++||++
T Consensus 240 p~f~~~g~lt~~n~s~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~-----~~~~~~~~~~~A~~~al~~Agi~~ 314 (399)
T PRK09052 240 PVFANKGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGV-----PPEIMGIGPIEAIPAALKQAGLKQ 314 (399)
T ss_pred CccCCCCcEECCccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecc-----CCCccchhHHHHHHHHHHHcCCCH
Confidence 0112 3489999999999999999999999999999998763 343444567899999999999999
Q ss_pred CCccEEEecCCCCCCCcHHHHHHHHHHhhcccCC-CCcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCC
Q 018323 238 HQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS-GSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLA 314 (358)
Q Consensus 238 ~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~-~~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~ 314 (358)
+|||++|+| |.+++..+...+..+ ...|+|..++ .+||+.+++|+.++++++++|+++
T Consensus 315 ~did~~ei~----------D~f~~~~l~~~e~lg~~~~~vN~~GG~la~GHp~gasG~~~~~~~~~~L~~~--------- 375 (399)
T PRK09052 315 DDLDWIELN----------EAFAAQSLAVIRDLGLDPSKVNPLGGAIALGHPLGATGAIRTATVVHGLRRT--------- 375 (399)
T ss_pred HHcCEEEeC----------cHHHHHHHHHHHHhCCCCcccCCCCchhhcCchHHHHHHHHHHHHHHHHHhc---------
Confidence 999999999 444444332222111 1258899999 789999999999999999999762
Q ss_pred CCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 315 KPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
+.++.++...+-||...++||++.
T Consensus 376 -------------------~~~~g~~~~c~~gg~g~a~~~e~~ 399 (399)
T PRK09052 376 -------------------NLKYGMVTMCVGTGMGAAGIFERL 399 (399)
T ss_pred -------------------CCCeEEEEEcccCCceeEEEEEeC
Confidence 246789999999999999999874
|
|
| >PRK07516 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=226.19 Aligned_cols=289 Identities=20% Similarity=0.252 Sum_probs=199.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+|+|+++++++ +|++|+..+.... .. ... +..+...+
T Consensus 21 ~~~eL~~eA~~~AL~dAgl~~~dId-----~vi~g~~~~~~~~-----------------~~-----~~~--~~~~~~~~ 71 (389)
T PRK07516 21 TLESLIVRVAREALAHAGIAAGDVD-----GIFLGHFNAGFSP-----------------QD-----FPA--SLVLQADP 71 (389)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEEecCCccc-----------------cc-----cch--hHHHHHhc
Confidence 4578999999999999999999898 8999875422100 00 001 11223445
Q ss_pred CCCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHH--------HH-----------h-hhcc--
Q 018323 93 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA--------GF-----------C-KSRA-- 149 (358)
Q Consensus 93 gl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~--------~~-----------~-~~~~-- 149 (358)
|++. |.++|+++|+|++.||..|+++|++|++|++||+|+|.+....... .+ . ....
T Consensus 72 gl~~~p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a 151 (389)
T PRK07516 72 ALRFKPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIA 151 (389)
T ss_pred CCCCCceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHH
Confidence 7765 8999999999999999999999999999999999999864321100 00 0 0000
Q ss_pred --cccccC------------------CCCCCC--------------------CCCCcCCCCceeeecceEEEEeccHHHH
Q 018323 150 --LTTKYN------------------GTPQEA--------------------SRPFDCGRDGFVIGEGSGVLVLEELEHA 189 (358)
Q Consensus 150 --l~~~~~------------------~~~~~~--------------------~~pf~~~~~g~~~geGaaa~vL~~~~~A 189 (358)
...+++ .+|... ..|+. ..+...++|||+|+||++++.|
T Consensus 152 ~~y~~~yg~~~e~~a~vav~~~~~A~~nP~A~~~~~~t~~~~~~~~~~~~~i~~pl~-~~d~~~~~DGAaa~il~s~~~a 230 (389)
T PRK07516 152 QAYFQRYGDQSDALAMIAAKNHANGVANPYAQMRKDLGFEFCRTVSEKNPLVAGPLR-RTDCSLVSDGAAALVLADAETA 230 (389)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHhhhcCChhhcCCcccHHhhhhhhhcCCcccCCCc-hhhcCCcCcceEEEEEecHHHH
Confidence 000000 011100 01111 1334458999999999999999
Q ss_pred HhcCCeeeEEEEeeeeecCCCCCCCCCC-ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHH-hhc
Q 018323 190 KKRGAKIYAEVRGYGMSGDAHHITQPHI-DGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV-FSD 267 (358)
Q Consensus 190 ~~~g~~~~a~i~g~~~~~~~~~~~~~~~-~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~-~~~ 267 (358)
++++. .++|+|++...+..+....++ ...+...+++++|+++||+|+|||++|+|.+.+.. |...++.+ |+.
T Consensus 231 ~~~~~--~v~i~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~did~~e~~d~f~~~----~~~~~e~lg~~~ 304 (389)
T PRK07516 231 RALQR--AVRFRARAHVNDFLPLSRRDPLAFEGPRRAWQRALAQAGVTLDDLSFVETHDCFTIA----ELIEYEAMGLAP 304 (389)
T ss_pred HhcCC--CEEEEEEEeccCcccccCCCccccHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCHH----HHHHHHHcCCCC
Confidence 98853 578999998877554322222 33667789999999999999999999999888776 55555554 222
Q ss_pred c------------cCCCCcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCC
Q 018323 268 H------------ATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDM 333 (358)
Q Consensus 268 ~------------~~~~~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~ 333 (358)
+ ..++.+|+|...+ .+||+.+|+|+.+++++++||++.. ...+..
T Consensus 305 ~G~~~~~~~~g~~~~~g~~pvN~sGG~la~Ghp~gasG~~~~~e~~~QL~g~a---------------------g~rQv~ 363 (389)
T PRK07516 305 PGQGARAIREGWTAKDGKLPVNPSGGLKAKGHPIGATGVSMHVLAAMQLTGEA---------------------GGMQIP 363 (389)
T ss_pred CCchHHHHHCCCccCCCCeeecCCCCcccCCCCccHHHHHHHHHHHHHhcCCc---------------------cCCcCC
Confidence 2 1245789998887 5699999999999999999999853 122334
Q ss_pred CCcEEEeeccc-cccceeeeEeeecC
Q 018323 334 PISAALSNSFG-FGGTNASLLFTKCQ 358 (358)
Q Consensus 334 ~~~~~l~~~~g-~gG~~~~~il~~~~ 358 (358)
+.+++++++.| .+.+++.+||++.+
T Consensus 364 ~a~~~l~~~~gg~~~~~~~~vl~~~~ 389 (389)
T PRK07516 364 GAKLAGVFNMGGAAVANYVSILERVK 389 (389)
T ss_pred chheeeeeccCcccceEEEEEEEecC
Confidence 46788988887 55567777778764
|
|
| >TIGR02430 pcaF beta-ketoadipyl CoA thiolase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-28 Score=228.70 Aligned_cols=271 Identities=21% Similarity=0.254 Sum_probs=196.0
Q ss_pred HHHHHHHHHHHHH-HCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 15 IAYALCAADEALH-DAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 15 ~~l~~~aa~~Al~-dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
..|+.++.+++|+ |+|++++++| .|++|+.... +......+..++..+|
T Consensus 26 ~~L~~~a~~~al~~~a~i~~~~Id-----~v~~G~~~~~-------------------------~~~~~~~ar~~~~~~G 75 (400)
T TIGR02430 26 DDLAAVPIKALLARNPQLDWAAID-----DVIYGCANQA-------------------------GEDNRNVARMAALLAG 75 (400)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC-----EEEEEecccc-------------------------ccccccHHHHHHHHcC
Confidence 6899999999999 6899999898 8999975421 0001234556889999
Q ss_pred CC-C-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHH-------H-----HHhh-h----------c
Q 018323 94 FQ-G-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM-------A-----GFCK-S----------R 148 (358)
Q Consensus 94 l~-g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~-------~-----~~~~-~----------~ 148 (358)
+. + |.++|+++|+||+.|+..|++.|++|++|++|++|+|+++..+.. . .... . .
T Consensus 76 l~~~~p~~~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (400)
T TIGR02430 76 LPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKA 155 (400)
T ss_pred CCCCCceEEeechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCCcccccccccccccccccccccccccccCccccc
Confidence 97 3 999999999999999999999999999999999999987653210 0 0000 0 0
Q ss_pred ccc------------cccCC--------------------------------------------CCCCCCC---------
Q 018323 149 ALT------------TKYNG--------------------------------------------TPQEASR--------- 163 (358)
Q Consensus 149 ~l~------------~~~~~--------------------------------------------~~~~~~~--------- 163 (358)
... .+++. +++...|
T Consensus 156 ~~~~~~M~~~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~~~~~~~~n~da~~r~~~t~e~l~ 235 (400)
T TIGR02430 156 LYGVDSMPETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQDEHPRPETTLEGLA 235 (400)
T ss_pred ccccCcHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccCCCCceeeCCCCccCCCCCHHHHh
Confidence 000 01100 1111111
Q ss_pred ---C-CcC-----CCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcC
Q 018323 164 ---P-FDC-----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSG 234 (358)
Q Consensus 164 ---p-f~~-----~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ag 234 (358)
| |+. ..+...++|||+++||++++.|++++.+++++|+|++.... .|.....+...+++++|+++|
T Consensus 236 ~~~~v~~p~g~lt~~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~-----~~~~~~~~~~~a~~~al~~Ag 310 (400)
T TIGR02430 236 KLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGV-----EPRIMGIGPVPATQKLLARAG 310 (400)
T ss_pred cCCCcccCCCCEeccccCCcCCceEEEEEecHHHHHHCCCCccEEEEEEEEecC-----CCccccchHHHHHHHHHHHhC
Confidence 0 111 11122289999999999999999999889999999987753 222334466789999999999
Q ss_pred CCCCCccEEEecCCCCCCCcHHHHHH--HHHHhhcccCCCCcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCC
Q 018323 235 LQSHQVDYVNAHATSTPLGDTVEATA--IRTVFSDHATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLT 310 (358)
Q Consensus 235 l~~~did~i~~h~~gt~~~d~~E~~a--~~~~~~~~~~~~~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~ 310 (358)
++++|||++|+| |..+... +.+.|+... ...|+|+.|+ .+||+.+++|+..++++++||+..
T Consensus 311 l~~~DID~~ei~-------D~f~~~~l~~~e~lG~~~--~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr~~----- 376 (400)
T TIGR02430 311 LSIDQFDVIELN-------EAFAAQALAVLRELGLAD--DDARVNPNGGAIALGHPLGASGARLVLTALRQLERS----- 376 (400)
T ss_pred CCHHHCCCcccC-------cHHHHHHHHHHHHcCCCC--CCCeECCCCchHhccChHHHHHHHHHHHHHHHHHhc-----
Confidence 999999999998 3333222 233344221 2369999999 489999999999999999999751
Q ss_pred CCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 311 LNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
..++.++....-||...++||+++
T Consensus 377 -----------------------~~~~g~~~~c~~gG~g~a~~~e~~ 400 (400)
T TIGR02430 377 -----------------------GGRYALCTMCIGVGQGIALAIERV 400 (400)
T ss_pred -----------------------CCCEEEEEEccccChhhEEEEEeC
Confidence 246788888899999999999874
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. |
| >PRK08131 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-28 Score=226.71 Aligned_cols=270 Identities=22% Similarity=0.281 Sum_probs=197.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcCC
Q 018323 15 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 94 (358)
Q Consensus 15 ~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 94 (358)
..|+.++.++||+|+|++++++| .+++|+...+.. . ...++..++...|+
T Consensus 27 ~eL~~~a~~~al~~agi~~~~Id-----~v~~G~~~~~~~----------------------~---~~~~ar~~~~~~Gl 76 (401)
T PRK08131 27 DDLAATVIRRLLEKSGFPGDDIE-----DVILGCTNQAGE----------------------D---SRNVARNALLLAGL 76 (401)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecccccc----------------------c---cccHHHHHHHhcCC
Confidence 78999999999999999999998 899997532110 0 01224457788898
Q ss_pred C--CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHH------------HHHhhh-------------
Q 018323 95 Q--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM------------AGFCKS------------- 147 (358)
Q Consensus 95 ~--gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~------------~~~~~~------------- 147 (358)
. -|.++|+.+|+||+.|+..|++.|++|++|++||+|+|+++..+.. ..+...
T Consensus 77 p~~~p~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (401)
T PRK08131 77 PVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKAESAFSRDAKVFDTTIGARFPNPKIVAQ 156 (401)
T ss_pred CCCCceeeeechhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCcccccccccccccCcchhhhhhcccccCcccccc
Confidence 7 4899999999999999999999999999999999999987643210 000000
Q ss_pred ----------cccccccCC---------------------CC--CCCCCCCcC---------------------------
Q 018323 148 ----------RALTTKYNG---------------------TP--QEASRPFDC--------------------------- 167 (358)
Q Consensus 148 ----------~~l~~~~~~---------------------~~--~~~~~pf~~--------------------------- 167 (358)
+.+..+++. .+ .....|.+.
T Consensus 157 ~a~~~mg~~ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~~~~~~~~v~~De~~r~~~~~e~L~ 236 (401)
T PRK08131 157 YGNDSMPETGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEALT 236 (401)
T ss_pred cccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccccCCCceEEecCCCCCCCCCHHHHh
Confidence 000001100 00 000001110
Q ss_pred ------------CCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCC
Q 018323 168 ------------GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGL 235 (358)
Q Consensus 168 ------------~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl 235 (358)
..+.-.++|||+++||++++.|++++.+++++|.|++...+ .|.....+...+++++|+++||
T Consensus 237 ~l~p~f~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~-----~~~~~~~~~~~a~~~a~~~agl 311 (401)
T PRK08131 237 KLKPLFEGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGV-----EPRIMGIGPVEAIKKALARAGL 311 (401)
T ss_pred cCCCCCCCCCccCCcCCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecc-----CCccccchHHHHHHHHHHHcCC
Confidence 00333489999999999999999999899999999998765 2332334667899999999999
Q ss_pred CCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCC---CCcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCC
Q 018323 236 QSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS---GSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLT 310 (358)
Q Consensus 236 ~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~---~~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~ 310 (358)
+++|||++|+| |.+++..+...+..+ ...|+|..++ .+|||.+|+|+.+++++++||+..-
T Consensus 312 ~~~did~~ei~----------d~Fa~~~l~~~e~lg~~~~~~~vN~~GG~la~GhP~gAtG~~~~~el~~qL~~~~---- 377 (401)
T PRK08131 312 TLDDMDIIEIN----------EAFASQVLGCLKGLGVDFDDPRVNPNGGAIAVGHPLGASGARLALTAARELQRRG---- 377 (401)
T ss_pred CHHHCCeehhc----------cHHHHHHHHHHHHcCCCCCCCCccCCccHHhcCCchhhhHHHHHHHHHHHHHhcC----
Confidence 99999999999 888887776544433 2578999999 5799999999999999999998621
Q ss_pred CCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 311 LNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
.++.++....-||...++||++.
T Consensus 378 ------------------------~~~~~~~~~~ggg~g~a~i~e~~ 400 (401)
T PRK08131 378 ------------------------KRYAVVSLCIGVGQGLAMVIERV 400 (401)
T ss_pred ------------------------CCceEEEEEecCChhhEEEEEec
Confidence 14455666677788888999874
|
|
| >PRK13359 beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=225.21 Aligned_cols=270 Identities=22% Similarity=0.254 Sum_probs=198.2
Q ss_pred HHHHHHHHHHHHH-HCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 15 IAYALCAADEALH-DAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 15 ~~l~~~aa~~Al~-dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
..|+.++.+++|+ ++|+++++|| .||+|+..... .....++..++...|
T Consensus 27 ~~L~~~a~~~al~r~a~i~~~~Id-----~vi~G~~~~~~-------------------------~~g~~~ar~~~l~~G 76 (400)
T PRK13359 27 DDLGAVPLKALVERNPDVDWAAID-----DVIYGCANQAG-------------------------EDNRNVARMSLLLAG 76 (400)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC-----EEEEEeccccc-------------------------cccccHHHHHHHHcC
Confidence 6788999999999 5799999998 99999754110 001245667888899
Q ss_pred CCC--CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHH-H----HH-------hhh-----------c
Q 018323 94 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM-A----GF-------CKS-----------R 148 (358)
Q Consensus 94 l~g--p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~-~----~~-------~~~-----------~ 148 (358)
|.. |.++|++.|+||+.|+..|++.|++|++|++|++|+|+++..+.. . .+ ... .
T Consensus 77 l~~~vp~~tV~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (400)
T PRK13359 77 LPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQ 156 (400)
T ss_pred CCCCCceEEEeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCccccccccccccCCcccccccccccccCCcccc
Confidence 974 999999999999999999999999999999999999998753310 0 00 000 0
Q ss_pred cc------------ccccCCC-------------------C-------------------------CCCCC---------
Q 018323 149 AL------------TTKYNGT-------------------P-------------------------QEASR--------- 163 (358)
Q Consensus 149 ~l------------~~~~~~~-------------------~-------------------------~~~~~--------- 163 (358)
.. ..+++.+ + ++..|
T Consensus 157 ~~~~~~mg~~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~De~~r~~t~e~l~~ 236 (400)
T PRK13359 157 LYGVDSMPETAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDPLVVSRDEHPRETTLEALAK 236 (400)
T ss_pred ccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeeccCCCCceeecCCCCCCCCCHHHHhc
Confidence 00 0001000 0 00001
Q ss_pred ---CCcCC-----CCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCC
Q 018323 164 ---PFDCG-----RDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGL 235 (358)
Q Consensus 164 ---pf~~~-----~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl 235 (358)
.|+.+ .+...++|||+++||++++.|++++.+++++|.|++... ..|.+...+...+++++|+++|+
T Consensus 237 l~p~f~~~g~lT~~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~-----~~p~~~~~~~~~A~~~al~~AGl 311 (400)
T PRK13359 237 LKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAG-----VEPRVMGIGPAPATQKLLARLGM 311 (400)
T ss_pred CCCccCCCCceecccccCccCceEEEEEecHHHHHHCCCCccEEEEEEEEec-----CCCCccchhHHHHHHHHHHHhCC
Confidence 12210 111128999999999999999999999999999998874 23444556778999999999999
Q ss_pred CCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCC---CCcceecccCC--cCCcccchhHHHHHHHHHHHHhCCCCCC
Q 018323 236 QSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS---GSLAFSSTKGA--IGHLLGAAGAVEAIFAVLAIHHGVAPLT 310 (358)
Q Consensus 236 ~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~---~~~~v~~~k~~--~Gh~~~asG~~~l~~~~~~l~~~~ipp~ 310 (358)
+++|||++|+| |.+++..+...+..+ ...|+|+.|+. +||+.+|+|+..+++++.||+.
T Consensus 312 ~~~DID~iei~----------dafa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~~------ 375 (400)
T PRK13359 312 TLDQFDVIELN----------EAFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLER------ 375 (400)
T ss_pred CHHHcCcCccC----------cHhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHhh------
Confidence 99999999999 555443333222211 34799999995 8999999999999999999975
Q ss_pred CCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 311 LNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
...++.+++...-||...++||++.
T Consensus 376 ----------------------~~~~~g~~~~c~~gG~g~a~~ie~~ 400 (400)
T PRK13359 376 ----------------------TGGRFALCTMCIGVGQGIAIAIERV 400 (400)
T ss_pred ----------------------cCCCeEEEEEcccCCceeEEEEEeC
Confidence 1247789999999999999999873
|
|
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=225.51 Aligned_cols=269 Identities=24% Similarity=0.297 Sum_probs=194.2
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+|||+++++|| ++++++..... .. ...+..++..+
T Consensus 20 t~~~La~~A~~~Al~dAgl~~~dID-----~vv~g~~~~~~---------------------~~-----~~~a~~va~~l 68 (386)
T TIGR01930 20 SAEDLGAAVIKELLERNPLDPELID-----DVIFGNVLQAG---------------------EQ-----QNIARQAALLA 68 (386)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCCC---------------------CC-----ChHHHHHHHHc
Confidence 3588999999999999999999998 88887653111 00 12355688889
Q ss_pred CCC--CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHH------H--H---------hhhcc----
Q 018323 93 GFQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA------G--F---------CKSRA---- 149 (358)
Q Consensus 93 gl~--gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~------~--~---------~~~~~---- 149 (358)
|+. .|+++++++|+|++.+|..|+++|++|.+|++||+|+|.++...... . + ...+.
T Consensus 69 Gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 148 (386)
T TIGR01930 69 GLPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDPL 148 (386)
T ss_pred CCCCCceeeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCccccccc
Confidence 996 38999999999999999999999999999999999988743211000 0 0 00000
Q ss_pred -----------cccccCCC-----------------------------CC--------------C-C-----------CC
Q 018323 150 -----------LTTKYNGT-----------------------------PQ--------------E-A-----------SR 163 (358)
Q Consensus 150 -----------l~~~~~~~-----------------------------~~--------------~-~-----------~~ 163 (358)
..++++.+ |. . . ++
T Consensus 149 ~~~~~a~~a~~y~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~~~~~~~~~da~~r~~~t~e~v~~s~ 228 (386)
T TIGR01930 149 NGLSMGLTAENLAKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKGPVTVSTDEGIRPNTTLEKLAKLK 228 (386)
T ss_pred cCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCC
Confidence 00000000 10 0 0 01
Q ss_pred CCcC------CCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 018323 164 PFDC------GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQS 237 (358)
Q Consensus 164 pf~~------~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~ 237 (358)
|... ..+...++|||+++||++++.|++++.+++++|.|++.... .|........++++++|+++|++|
T Consensus 229 ~i~~P~~~l~~~d~~~~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~-----~~~~~~~~~~~a~~~a~~~Agi~~ 303 (386)
T TIGR01930 229 PAFDPNGTVTAGNSSPLNDGAAALLLMSEERAKELGLTPLARIVSFAVAGV-----DPEIMGLGPVPAIPKALKKAGLSI 303 (386)
T ss_pred CCcCCCCeeeCCccCCCCcceeEEEEecHHHHHHCCCCccEEEEEEEEecC-----CCccccccHHHHHHHHHHHcCCCH
Confidence 1100 11222369999999999999999999999999999988753 222233455689999999999999
Q ss_pred CCccEEEecCCCCCCCcHHHHHHHHHHhhcccCC-CCcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCC
Q 018323 238 HQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS-GSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLA 314 (358)
Q Consensus 238 ~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~-~~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~ 314 (358)
+|||++|+| |.+++..++..+..+ +..|++..++ .+||+.+++|+.+++++++||++.
T Consensus 304 ~did~~e~~----------d~fa~~~~~~~e~lG~~~~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~--------- 364 (386)
T TIGR01930 304 SDIDLFEIN----------EAFAAQVLACIKELGLDLEKVNVNGGAIALGHPLGASGARIVTTLLHELKRR--------- 364 (386)
T ss_pred HHCCeeehc----------chhHHHHHHHHHHhCCChhhcCCCCChHhhCCcHHHHHHHHHHHHHHHHHhc---------
Confidence 999999999 777766554433221 2356666666 789999999999999999999863
Q ss_pred CCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 315 KPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
+.+++|++..+.||...++|||
T Consensus 365 -------------------~~~~gl~~~~~~gG~g~~~~~e 386 (386)
T TIGR01930 365 -------------------GGRYGLATICIGGGQGIAVILE 386 (386)
T ss_pred -------------------CCCEEEEEEeccCCceEEEEeC
Confidence 2478999999999999999886
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-27 Score=223.59 Aligned_cols=270 Identities=21% Similarity=0.298 Sum_probs=201.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+|+|++++++| .|++|+...+.. ....++..++..+|
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~ID-----~vi~G~~~~~~~-------------------------~~~~~a~~i~~~lG 76 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAEVE-----DVIMGCANPEGA-------------------------TGANIARQIALRAG 76 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----cEEEEEeecccc-------------------------cccHHHHHHHHHcC
Confidence 478999999999999999999998 799987642210 01136778888999
Q ss_pred CC--CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHH----------HH------Hhhhcc----cc
Q 018323 94 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM----------AG------FCKSRA----LT 151 (358)
Q Consensus 94 l~--gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~----------~~------~~~~~~----l~ 151 (358)
+. .|+++|+++|+|++.||..|+++|++|++|++||+|+|+++..+.. .. +..+.. +.
T Consensus 77 l~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~a 156 (392)
T PRK07108 77 LPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNRHMLREGWLVEHKPEIYWSMLQTAENVA 156 (392)
T ss_pred CCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCCCcCccchhhhccCCccccCHHHHHHHHH
Confidence 86 5999999999999999999999999999999999999987642100 00 000000 00
Q ss_pred ccc----------------------C-C----------------CCCC--------------C------------CC-CC
Q 018323 152 TKY----------------------N-G----------------TPQE--------------A------------SR-PF 165 (358)
Q Consensus 152 ~~~----------------------~-~----------------~~~~--------------~------------~~-pf 165 (358)
..+ + . +|.. . .+ +|
T Consensus 157 ~~~~i~r~~~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~~l~~~~ 236 (392)
T PRK07108 157 KRYGISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSAL 236 (392)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHhcCCCCC
Confidence 000 0 0 0100 0 00 11
Q ss_pred c----CCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcc
Q 018323 166 D----CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVD 241 (358)
Q Consensus 166 ~----~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did 241 (358)
. ...+.-.++|||+++||++++.|++++.+++++|+|++...+ .|+....+...+++++|+++|++|+|||
T Consensus 237 ~~g~lt~~n~~~~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~agl~~~Did 311 (392)
T PRK07108 237 PGGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGC-----EPDEMGIGPVFAVPKLLKQAGLKVDDID 311 (392)
T ss_pred CCCCCcCCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecc-----CCcccchhHHHHHHHHHHHcCCCHHHcC
Confidence 0 011222389999999999999999999999999999998764 3444445668899999999999999999
Q ss_pred EEEecCCCCCCCcHHHHHHHHHHhhcccCCC-CcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCC
Q 018323 242 YVNAHATSTPLGDTVEATAIRTVFSDHATSG-SLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDP 318 (358)
Q Consensus 242 ~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~-~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~ 318 (358)
++|.| |.+++..++..+..+. +.|++...+ .+||+.+++|+..++.++.+|+.
T Consensus 312 ~~ei~----------eafa~~~l~~~e~lg~~~~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l~~-------------- 367 (392)
T PRK07108 312 LWELN----------EAFAVQVLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGHALIEGKR-------------- 367 (392)
T ss_pred chHhh----------hHHHHHHHHHHHhcCCCccccCCCCChHHhCcchhhhHHHHHHHHHHHHHh--------------
Confidence 99999 9999999986544321 134554444 78999999999999999999865
Q ss_pred CCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 319 IFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
.+.++.+++...-||...++||++
T Consensus 368 --------------~~~~~g~~~~c~~gg~g~a~~ie~ 391 (392)
T PRK07108 368 --------------RGAKYVVVTMCIGGGQGAAGLFEV 391 (392)
T ss_pred --------------hCCCEEEEEEccccChhhEEEEEe
Confidence 124789999999999999999986
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-27 Score=224.19 Aligned_cols=286 Identities=19% Similarity=0.215 Sum_probs=194.5
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHH
Q 018323 12 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 91 (358)
Q Consensus 12 ~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 91 (358)
.+..+|+.+|+++||+|||++++++| ++++|+..+... ....+...
T Consensus 20 ~~~~~La~~A~~~Al~dAGl~~~dID-----~~~~g~~~~~~~-----------------------------~~~~~~~~ 65 (391)
T PRK08256 20 WDYPDMAAEAGRAALADAGIDYDAVQ-----QAYVGYVYGDST-----------------------------SGQRALYE 65 (391)
T ss_pred CCHHHHHHHHHHHHHHHcCCChHHCC-----eeEEEEEeCCcc-----------------------------hhHHHHHH
Confidence 44679999999999999999998887 666665332110 01124567
Q ss_pred cCCCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHH----------HHHHh-------hhc-c---
Q 018323 92 YGFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS----------MAGFC-------KSR-A--- 149 (358)
Q Consensus 92 lgl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~----------~~~~~-------~~~-~--- 149 (358)
+|+++ |.++++++|+|++.||..|+++|++|++|+|||+|+|.+..... ...+. ... .
T Consensus 66 lGl~~~~~~~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (391)
T PRK08256 66 VGMTGIPIVNVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPA 145 (391)
T ss_pred cCCCCCCCcccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCcc
Confidence 89988 99999999999999999999999999999999999998642110 00000 000 0
Q ss_pred ----------cccccCC------------------CCCCCC-CCCc--------------CCCCceeeecceEEEEeccH
Q 018323 150 ----------LTTKYNG------------------TPQEAS-RPFD--------------CGRDGFVIGEGSGVLVLEEL 186 (358)
Q Consensus 150 ----------l~~~~~~------------------~~~~~~-~pf~--------------~~~~g~~~geGaaa~vL~~~ 186 (358)
..+.++. .|.... .|.+ ...+...++|||+|+||.++
T Consensus 146 ~~~~a~~a~~y~~~~G~t~e~~a~vav~~~~~A~~np~A~~~~~~t~e~~~~s~~i~~Pl~~~d~~~~~DGAaA~il~s~ 225 (391)
T PRK08256 146 LRMFGGAGREHMEKYGTTAETFAKIGVKARRHAANNPYAQFRDEYTLEDVLASPMIWGPLTRLQCCPPTCGAAAAIVCSE 225 (391)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhcCCCCCHHHHhcCCcccCCCcHhhcCCCCCCeEEEEEecH
Confidence 0000000 010000 0000 01122227999999999999
Q ss_pred HHHHhcCCeeeEEEEeeeeecCCCCC-CC---CCCC-hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHH
Q 018323 187 EHAKKRGAKIYAEVRGYGMSGDAHHI-TQ---PHID-GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAI 261 (358)
Q Consensus 187 ~~A~~~g~~~~a~i~g~~~~~~~~~~-~~---~~~~-~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~ 261 (358)
+.|++++.+++++|.|++...+.... .. ++.. ......+++++|+++|++++|||++|+|...+.. +...+
T Consensus 226 ~~a~~~~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag~~~~DiD~~ei~d~f~~~----~l~~l 301 (391)
T PRK08256 226 EFARKHGLDRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAGIGPEDIDVVELHDCFSAN----ELLTY 301 (391)
T ss_pred HHHHhcCCCCCEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEeeccCCcHH----HHHHH
Confidence 99999886778999998877654322 11 1111 2345679999999999999999999999555444 55555
Q ss_pred HHH-hhccc------------CCCCcceecccCC--cCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCc
Q 018323 262 RTV-FSDHA------------TSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMP 326 (358)
Q Consensus 262 ~~~-~~~~~------------~~~~~~v~~~k~~--~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~ 326 (358)
+.+ |+.+. .++++|+|...+. +||+.+|+|+..++++++||+.+.
T Consensus 302 e~lg~~~~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp~gasG~~~~~e~~~QL~g~a-------------------- 361 (391)
T PRK08256 302 EALGLCPEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHPLGATGLAQCAELTWQLRGTA-------------------- 361 (391)
T ss_pred HHcCCCCCCchHHHHHCCCccCCCCeeeCCCCccccCCCCccHHHHHHHHHHHHHhcCCc--------------------
Confidence 554 23221 2467899999995 599999999999999999998743
Q ss_pred cccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 327 LTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 327 ~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
...+..+.+++++++.|.+.++...||++
T Consensus 362 -g~~Qv~~~~~~l~~~~G~~~~~~~~v~~~ 390 (391)
T PRK08256 362 -GARQVEGARLALQHNLGLGGACVVTLYQR 390 (391)
T ss_pred -CCCcCCccceEEEeccccceeEEEEEEec
Confidence 11223345789999999665666666765
|
|
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-27 Score=221.98 Aligned_cols=272 Identities=27% Similarity=0.344 Sum_probs=195.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+|+|+++++|| .|++|+...... .....+..++..+|
T Consensus 27 ~~eL~~~A~~~AL~~agi~~~dID-----~vi~g~~~~~~~-------------------------~~~~~a~~~~~~~G 76 (394)
T PRK09051 27 PTDLGATVVREALARAGVDPDQVG-----HVVFGHVIPTEP-------------------------RDMYLSRVAAINAG 76 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcC-----EEEEeeeccccC-------------------------CCccHHHHHHHHcC
Confidence 478999999999999999999998 899987642110 00122334556779
Q ss_pred CC--CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHH-------------HHHhh-hccccc-----
Q 018323 94 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM-------------AGFCK-SRALTT----- 152 (358)
Q Consensus 94 l~--gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~-------------~~~~~-~~~l~~----- 152 (358)
+. .|+++|+++|+|++.|+..|+++|++|.+|++||+|+|+++..+.. ..+.. ...+..
T Consensus 77 l~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (394)
T PRK09051 77 VPQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGTI 156 (394)
T ss_pred CCCCCceEEecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhhcccccccccCC
Confidence 85 4999999999999999999999999999999999999986543210 00000 000000
Q ss_pred -----------ccCC-------------------------------------------CCCCCCC------------CCc
Q 018323 153 -----------KYNG-------------------------------------------TPQEASR------------PFD 166 (358)
Q Consensus 153 -----------~~~~-------------------------------------------~~~~~~~------------pf~ 166 (358)
+++. +|+...| |+.
T Consensus 157 ~~~~~a~~~~~~ygitre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~~~da~~r~~~t~e~v~~~~~v~ 236 (394)
T PRK09051 157 HMGVTAENVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTRKGEVVFDTDEHVRADTTLEDLAKLKPVF 236 (394)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCCCCCeEECCCCCCCCCCCHHHHcCCCCcc
Confidence 0000 1222222 221
Q ss_pred CCCCcee-------eecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 018323 167 CGRDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQ 239 (358)
Q Consensus 167 ~~~~g~~-------~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~d 239 (358)
...+|.+ ++|||+++||++++.|++++.+++++|+|++.... .|.....+...+++++|+++|++++|
T Consensus 237 ~~~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~-----~~~~~~~~~~~a~~~al~~agi~~~d 311 (394)
T PRK09051 237 KKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGV-----DPEYMGIGPVPATQKALERAGLTVAD 311 (394)
T ss_pred cCCCccEeCCcCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEecc-----CCCcccccHHHHHHHHHHHcCCCHHH
Confidence 1111222 68999999999999999999999999999998764 23333456678999999999999999
Q ss_pred ccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCC
Q 018323 240 VDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPD 317 (358)
Q Consensus 240 id~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~ 317 (358)
||++|+|.. +.++...+.+.|+.. ..|+|..++ .+||+.+|+|+..+++++.+|+++
T Consensus 312 id~~ei~d~-----f~~~~~~~~e~lg~~----~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~~------------ 370 (394)
T PRK09051 312 LDVIEANEA-----FAAQACAVTRELGLD----PAKVNPNGSGISLGHPVGATGAIITVKALYELQRI------------ 370 (394)
T ss_pred cCEEEecCc-----cHHHHHHHHHHhCCC----ccccCCCccHHHhcchHHHHHHHHHHHHHHHHHhc------------
Confidence 999999932 223444444445432 247777777 579999999999999999999751
Q ss_pred CCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 318 PIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
+.++.+++.+.-||...++||++.
T Consensus 371 ----------------~~~~g~~~~c~~gG~g~a~~~e~~ 394 (394)
T PRK09051 371 ----------------GGRYALVTMCIGGGQGIAAIFERL 394 (394)
T ss_pred ----------------CCCEEEEEEccccChhhEEEEEeC
Confidence 247899999999999999999873
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-27 Score=221.58 Aligned_cols=288 Identities=18% Similarity=0.180 Sum_probs=200.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+|||++++++| ++++++. .+. +.+. ..++..++..+|
T Consensus 24 ~~eL~~eAa~~Al~dAgl~~~dID-----~iv~~~~-~~~----------------------~~~~--~~~~~~va~~LG 73 (386)
T PRK08313 24 MAGLVREAIDRALADAGLTWDDID-----AVVVGKA-PDF----------------------FEGV--MMPELFLADALG 73 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEecc-ccc----------------------cccc--cCchHHHHHhcC
Confidence 478999999999999999999998 8888762 110 0111 012247899999
Q ss_pred CCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHH--------------------HHH------hh
Q 018323 94 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM--------------------AGF------CK 146 (358)
Q Consensus 94 l~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~--------------------~~~------~~ 146 (358)
+++ |.+.++++|+++..++..|+++|++|.+|+|||+++|.+...... ..+ ..
T Consensus 74 l~~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~ym~~ 153 (386)
T PRK08313 74 ATGKPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRR 153 (386)
T ss_pred CCCCceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCccccccccccccccccccchHHHHHHHHHHHHHH
Confidence 986 889999999999999999999999999999999999975332000 000 00
Q ss_pred hcccccc-----------cCCCCCCCCC-C-Cc--------------CCCCceeeecceEEEEeccHHHHHhcCCeeeEE
Q 018323 147 SRALTTK-----------YNGTPQEASR-P-FD--------------CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAE 199 (358)
Q Consensus 147 ~~~l~~~-----------~~~~~~~~~~-p-f~--------------~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~ 199 (358)
.+..... ...+|....+ | ++ ..-+...++|||+|+||.+++.|++.+.++.++
T Consensus 154 ~G~~~e~la~vav~~~~~A~~NP~A~~r~~~~t~e~v~~s~~ia~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~ 233 (386)
T PRK08313 154 SGAPEHIGAMVAVKDRLNGAKNPYAHLHQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAW 233 (386)
T ss_pred HCcCHHHHHHHHHHHHHHHccCcHHhcCCCCCCHHHHhcCCcccCCCchhccCCCCCceEEEEEecHHHHHhcCCCCCeE
Confidence 0000000 0001111111 1 11 112334489999999999999999888788889
Q ss_pred EEeeeeecCCCCCC-CCCCChHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCCCCcHHHHHHHHHH-hhccc------
Q 018323 200 VRGYGMSGDAHHIT-QPHIDGKGAILAMTRALKQSGLQ--SHQVDYVNAHATSTPLGDTVEATAIRTV-FSDHA------ 269 (358)
Q Consensus 200 i~g~~~~~~~~~~~-~~~~~~~~~~~~~~~al~~agl~--~~did~i~~h~~gt~~~d~~E~~a~~~~-~~~~~------ 269 (358)
|+|++...+..... .+.........+++++|+++|++ ++|||++|+|.+.+.. |...++.+ |+.+.
T Consensus 234 I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~~el~d~F~~~----~~~~~e~lGl~~~G~~~~~~ 309 (386)
T PRK08313 234 IHGTAMRTEPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDVAEIYVPFSWF----EPMWLENLGFAPEGEGWKLT 309 (386)
T ss_pred EEEEEEEecCcccccccccccHHHHHHHHHHHHHcCCCCChhhCCEEEeccCChHH----HHHHHHHcCCCCCCchHHHH
Confidence 99999877654322 22233456778999999999998 6999999999665554 55555544 23221
Q ss_pred ------CCCCcceecccCCc-CCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeec
Q 018323 270 ------TSGSLAFSSTKGAI-GHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNS 342 (358)
Q Consensus 270 ------~~~~~~v~~~k~~~-Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 342 (358)
.++++|+|...+.+ ||+.+++|+.+++++++||+... ...+..+.+.+|+++
T Consensus 310 ~~G~~~~~G~~pvN~~GG~l~g~p~gatG~~~~~e~~~qlrG~a---------------------g~rQv~~a~~~l~~~ 368 (386)
T PRK08313 310 EAGETAIGGRLPVNPSGGVLSSNPIGASGMIRFAEAALQVMGKA---------------------GEHQVDGARKALGHA 368 (386)
T ss_pred HCCCcCCCCCccccCCCcccccCCCcHHHHHHHHHHHHHhcccc---------------------cCCcCCCccEEEEec
Confidence 25678999999966 99999999999999999999853 122334567899998
Q ss_pred cc-cccceeeeEeee
Q 018323 343 FG-FGGTNASLLFTK 356 (358)
Q Consensus 343 ~g-~gG~~~~~il~~ 356 (358)
.| .+...+.+||++
T Consensus 369 ~Gg~~~~~~~~v~~~ 383 (386)
T PRK08313 369 YGGGSQFFSMWVVGS 383 (386)
T ss_pred cCCcceEEEEEEEec
Confidence 86 444555666665
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-27 Score=224.29 Aligned_cols=271 Identities=18% Similarity=0.244 Sum_probs=196.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+|+|++++++| .|++|+..+... ...++..++..+|
T Consensus 26 ~~eLa~~A~~~AL~~agl~~~dID-----~vv~g~~~~~~~--------------------------~~~~a~~va~~~G 74 (404)
T PRK06205 26 AEELAATVIRALVERTGIDPARID-----DVIFGQGYPNGE--------------------------APAIGRVAALDAG 74 (404)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCCCC--------------------------CChHHHHHHHHcC
Confidence 478999999999999999999998 899997642211 1233456888899
Q ss_pred CC-C-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHH----------------HHH------------
Q 018323 94 FQ-G-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS----------------MAG------------ 143 (358)
Q Consensus 94 l~-g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~----------------~~~------------ 143 (358)
+. + |.++|+.+|+|++.|+..|+++|++|.+|++||+|+|+++.... +..
T Consensus 75 l~~~~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (404)
T PRK06205 75 LPVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRR 154 (404)
T ss_pred CCCCCceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCcccccccc
Confidence 97 3 89999999999999999999999999999999999997653110 000
Q ss_pred Hh---hh----cccccccCC--------------------------------------------CCCCCCC---------
Q 018323 144 FC---KS----RALTTKYNG--------------------------------------------TPQEASR--------- 163 (358)
Q Consensus 144 ~~---~~----~~l~~~~~~--------------------------------------------~~~~~~~--------- 163 (358)
+. .+ .....+++. +|+...|
T Consensus 155 ~~~~~~m~~~a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~ 234 (404)
T PRK06205 155 FPVPGGMIETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDPTVVDRDEHPRADTTLESLA 234 (404)
T ss_pred cCCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCCCCCceEeccCCCCCCCCCHHHHh
Confidence 00 00 000000000 0111111
Q ss_pred ---C-Cc--------CCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHH
Q 018323 164 ---P-FD--------CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 231 (358)
Q Consensus 164 ---p-f~--------~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 231 (358)
| |+ ...+...++|||+++||++++.|++++.+++++|.|++...+.. .....+...+++++|+
T Consensus 235 ~~~~v~~~~~p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~ 309 (404)
T PRK06205 235 KLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEP-----SRMGIGPVPATEKALA 309 (404)
T ss_pred cCCCcCccCCCCCceeCcccCCCCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccCC-----ccccccHHHHHHHHHH
Confidence 1 10 11122236899999999999999999999999999999876422 2122356789999999
Q ss_pred HcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCC----CCcceecccC--CcCCcccchhHHHHHHHHHHHHhC
Q 018323 232 QSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS----GSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHG 305 (358)
Q Consensus 232 ~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~----~~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~ 305 (358)
++||+++|||++|+| |.+++..+...+..+ ...+++...+ .+||+.+++|+..++++++||+..
T Consensus 310 ~Agl~~~Did~~ei~----------d~f~~~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~ 379 (404)
T PRK06205 310 RAGLTLDDIDLIELN----------EAFAAQVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRELQRR 379 (404)
T ss_pred HcCCCHHHCCEeeec----------cHHHHHHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHHHHhc
Confidence 999999999999999 666554443322111 0124666666 679999999999999999999762
Q ss_pred CCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 306 VAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 306 ~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
..+++|++.+.-||...++||++++
T Consensus 380 ----------------------------~~~~gl~~~c~~gg~g~a~~~e~~~ 404 (404)
T PRK06205 380 ----------------------------QARYGLETMCIGGGQGLAAVFERVN 404 (404)
T ss_pred ----------------------------CCCeEEEEEeccCChhhEEEEEecC
Confidence 2478999999999999999999875
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-27 Score=220.16 Aligned_cols=286 Identities=17% Similarity=0.163 Sum_probs=193.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+|+|++++++| ++++++.... +.+ ....+..++..+
T Consensus 28 ~~~~L~~~A~~~Al~dagl~~~dID-----~~i~~~~~~~-----------------------~~~--~~~~a~~l~~~l 77 (392)
T PRK06065 28 TPQELAWEAASKALDEAGLELKDID-----CVVIGSAPDA-----------------------FDG--VHMKGEYLSHGS 77 (392)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEeccCCc-----------------------ccc--cccHHHHHHHHc
Confidence 4578999999999999999999998 8888752110 000 123455688999
Q ss_pred CCCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHH--HHH--------Hh-hhc------------
Q 018323 93 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS--MAG--------FC-KSR------------ 148 (358)
Q Consensus 93 gl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~--~~~--------~~-~~~------------ 148 (358)
|+.+ |.+.|+++|+|+..+|..|+++|++|.+|+|||++.|++..... ... +. ..+
T Consensus 78 G~~~~~~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~Al~a~ 157 (392)
T PRK06065 78 GGIRKPVSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNLIWIFAMEMH 157 (392)
T ss_pred CCCCCCeEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccHHHHHHHHHH
Confidence 9875 99999999999999999999999999999999999997422100 000 00 000
Q ss_pred ccccccC------------------CCCCCC----------------CCCCcCCCCceeeecceEEEEeccHHHHHhcCC
Q 018323 149 ALTTKYN------------------GTPQEA----------------SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGA 194 (358)
Q Consensus 149 ~l~~~~~------------------~~~~~~----------------~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~ 194 (358)
...+.++ .+|... ..|+. ..+...++|||+|+||.+++.|++.+.
T Consensus 158 rym~~yG~~~e~lA~vav~~~~~A~~NP~A~~r~~lt~e~vl~s~~ia~Pl~-l~d~~~~~DGAaA~vl~s~e~A~~l~~ 236 (392)
T PRK06065 158 RYMATYGIKKEEIALVSVKNKRNALNNPYAQLGSKITVEDVLKSEVLVWPVQ-LLDVSPVSDGAAAIVLASEDLARRYTD 236 (392)
T ss_pred HHHHHHCcCHHHHHHHHHHHHHhhccCchhhhcCCCCHHHHhcCCcccCCCc-hhhcCCCCCceEEEEEeCHHHHHhcCC
Confidence 0000000 011000 01111 122234899999999999999999887
Q ss_pred eeeEEEEeeeeecCCCCCCCC-CCChHHHHHHHHHHHHHcCCCC--CCccEEEecCCCCCCCcHHHHHHHHHH-hhcc--
Q 018323 195 KIYAEVRGYGMSGDAHHITQP-HIDGKGAILAMTRALKQSGLQS--HQVDYVNAHATSTPLGDTVEATAIRTV-FSDH-- 268 (358)
Q Consensus 195 ~~~a~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~al~~agl~~--~did~i~~h~~gt~~~d~~E~~a~~~~-~~~~-- 268 (358)
++ .+|.|++...+....... .........+++++|+++|+++ +|||++|+|...+.. |...++.+ |+.+
T Consensus 237 ~~-v~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~Fs~~----~l~~~E~lG~~~~G~ 311 (392)
T PRK06065 237 TP-VWVEGVGWTLDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDYK----ELHHLEGLQLAKRGE 311 (392)
T ss_pred CC-EEEEEEEEecCccccccccccccHHHHHHHHHHHHHcCCCCchhhCcEEEecCCChHH----HHHHHHHcCCCCCCc
Confidence 66 579999887655332221 1223445679999999999985 999999999665543 55555444 2221
Q ss_pred ----------cCCCCcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCC-
Q 018323 269 ----------ATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPI- 335 (358)
Q Consensus 269 ----------~~~~~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~- 335 (358)
..++++|+|...+ ..||+.+++|+.+++++++||+... ...+..+.
T Consensus 312 ~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~a---------------------g~rQv~~a~ 370 (392)
T PRK06065 312 APKLLKEGVFDIDGDIPSSPSGGLLGVGNPIAAAGLMKVISIYWQLKGTA---------------------GKMQVKKPV 370 (392)
T ss_pred HHHHHHCCCccCCCCeeecCCCccccCCCCccHHHHHHHHHHHHHHhccc---------------------cCCcCCCcc
Confidence 1246789999998 4599999999999999999998753 11222344
Q ss_pred cEEEeeccc-cccceeeeEee
Q 018323 336 SAALSNSFG-FGGTNASLLFT 355 (358)
Q Consensus 336 ~~~l~~~~g-~gG~~~~~il~ 355 (358)
++++++++| .+..++.+||+
T Consensus 371 ~~~l~~~~Gg~~~~~~~~il~ 391 (392)
T PRK06065 371 HTGVAQAWGDLMQAGTVIVLR 391 (392)
T ss_pred ceeEEeccccccceeEEEEec
Confidence 789998887 44455566654
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-27 Score=223.13 Aligned_cols=294 Identities=17% Similarity=0.184 Sum_probs=192.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+|||+++++|| +++++...... .+ .+.....++..+|
T Consensus 37 ~~eL~~eA~~~Al~dagl~~~dID-----~vv~~~~~~~~-----------------------~g--~~~~~~~~~~~lG 86 (430)
T PRK06365 37 FRERVKKAFDYAMNDAGLTLADID-----GSVASYFSDHF-----------------------QR--QLLAGIMVQDYLG 86 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcC-----EEEEecccccc-----------------------cc--cchhhHHHHHhcC
Confidence 478999999999999999999898 77766432110 00 0122234678999
Q ss_pred CCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcc-----------------------
Q 018323 94 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRA----------------------- 149 (358)
Q Consensus 94 l~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~----------------------- 149 (358)
+++ |+++++.+|+|+..||..|++.|++|.+|+|||+|+|++..............
T Consensus 87 l~~~~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~al~a~ 166 (430)
T PRK06365 87 LVPKPSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIALASDTNFDYPLGGFYTGYYAMMAV 166 (430)
T ss_pred CCCCceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhcccccccccccccCccHHHHHHHHH
Confidence 987 88999999999999999999999999999999999997654221100000000
Q ss_pred -cccccCC------------------CCCC-CCCCCc--------------CCCCceeeecceEEEEeccHHHHHhcCCe
Q 018323 150 -LTTKYNG------------------TPQE-ASRPFD--------------CGRDGFVIGEGSGVLVLEELEHAKKRGAK 195 (358)
Q Consensus 150 -l~~~~~~------------------~~~~-~~~pf~--------------~~~~g~~~geGaaa~vL~~~~~A~~~g~~ 195 (358)
....++. +|.. ...|++ ...+...++|||+|+||.+++.|++.+.+
T Consensus 167 ry~~~yG~t~e~la~vav~~~~~A~~NP~A~~~~~~t~e~v~~s~~i~~Plt~~d~~~~sDGAaAvvl~See~A~~l~~~ 246 (430)
T PRK06365 167 RHMYEFGTTVEQLAKVSVKNHGNAIHNPFAQSPMKITVEDVRKSPMVSYPLTRLDVCAMSDGAACAILASEDKAFEITDK 246 (430)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHhhCcHhhcCCCCCHHHHhcCCccccCcchhhcCCcCCceEEEEEecHHHHHhcCCC
Confidence 0000000 0000 000110 00112227999999999999999988876
Q ss_pred eeEEEEeeeeecCCCCCCC-C----------------------CCChHHHHHHHHHHHHHcCCC--CCCccEEEecCCCC
Q 018323 196 IYAEVRGYGMSGDAHHITQ-P----------------------HIDGKGAILAMTRALKQSGLQ--SHQVDYVNAHATST 250 (358)
Q Consensus 196 ~~a~i~g~~~~~~~~~~~~-~----------------------~~~~~~~~~~~~~al~~agl~--~~did~i~~h~~gt 250 (358)
+ .+|++.+...++..... + .........+++++|+++||+ ++|||++|+|...+
T Consensus 247 p-v~i~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa 325 (430)
T PRK06365 247 P-VLIKAIGTGSDTLRLADRPFGEVPLLPNESPDDYKDLRYPGVHSFRAGRMAAKEAYEMAGITDPLNDLDLIELHDAYT 325 (430)
T ss_pred C-eEEEEEEEeccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCCCHHHCCEEEeecCCc
Confidence 6 46667666554322110 0 011224457999999999998 79999999995544
Q ss_pred CCCcHHHHHHHHHH-hhccc------------CCCCcceecccCC--cCCcccchhHHHHHHHHHHHHhCCCCCCCCCCC
Q 018323 251 PLGDTVEATAIRTV-FSDHA------------TSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAK 315 (358)
Q Consensus 251 ~~~d~~E~~a~~~~-~~~~~------------~~~~~~v~~~k~~--~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~ 315 (358)
.. |...++.+ |+.+. .++++|||...+. .||+.+|+|+.+++++++||++..-+..-
T Consensus 326 ~~----~l~~lE~lGl~~~Ge~~~~~~~G~~~~~G~~piNt~GG~la~Ghp~GatG~~~~~e~~~QLrG~a~~~~~---- 397 (430)
T PRK06365 326 SS----EIQTYEDLGLCKYGEGGQFIESGKPELPGKLPVNPSGGLLAAGHAVGATGIMQAVFMFWQLQGRIKKHFH---- 397 (430)
T ss_pred HH----HHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCchhcCCCcccHHHHHHHHHHHHHHhcccCCCCC----
Confidence 43 44444443 22211 1356899999995 59999999999999999999985321000
Q ss_pred CCCCCCCCCCcccc-CCCCCCcEEEeeccc-cccceeeeEeeecC
Q 018323 316 PDPIFNDNFMPLTA-SKDMPISAALSNSFG-FGGTNASLLFTKCQ 358 (358)
Q Consensus 316 ~~~~~~~~~~~~~~-~~~~~~~~~l~~~~g-~gG~~~~~il~~~~ 358 (358)
.. .+..+.+++++++.| .+..++++||++++
T Consensus 398 ------------~~~rQv~~a~~~l~~~~gg~~~~~~~~vl~~~~ 430 (430)
T PRK06365 398 ------------DDYLQVKNAKRGLIHSHAGTGTYVTVTILEAPK 430 (430)
T ss_pred ------------cccccCCCccEEEEecCCcccceEEEEEEecCC
Confidence 00 123346788998877 55567788888764
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-27 Score=224.80 Aligned_cols=271 Identities=23% Similarity=0.340 Sum_probs=190.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+|||+++++|| ++++|+...... ....+..+...+
T Consensus 25 ~~~~La~~A~~~AL~dAgl~~~dID-----~vi~g~~~~~~~--------------------------~~~~~~~~~~~~ 73 (393)
T PRK05790 25 SAVELGAIVIKAALERAGVPPEQVD-----EVIMGQVLQAGA--------------------------GQNPARQAALKA 73 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----eEEEEEecCCCC--------------------------CCcHHHHHHHHc
Confidence 3588999999999999999999998 888887542100 011223355667
Q ss_pred CCC--CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHH---------------H-HHH--hh-hc---
Q 018323 93 GFQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS---------------M-AGF--CK-SR--- 148 (358)
Q Consensus 93 gl~--gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~---------------~-~~~--~~-~~--- 148 (358)
|+. .|.++++.+|+|++.||..|+++|++|.+|+|||+|+|.++..+. . ..+ .. ..
T Consensus 74 gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (393)
T PRK05790 74 GLPVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFN 153 (393)
T ss_pred CCCCCCceeeecccchHHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccC
Confidence 875 489999999999999999999999999999999999997532110 0 000 00 00
Q ss_pred ---------ccccccCC--------------------------------------------CCCCCCC------C-----
Q 018323 149 ---------ALTTKYNG--------------------------------------------TPQEASR------P----- 164 (358)
Q Consensus 149 ---------~l~~~~~~--------------------------------------------~~~~~~~------p----- 164 (358)
.....++. ++++..+ |
T Consensus 154 ~~~~a~~a~~y~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~~~~d~~~~~~~~~e~l~~~~ 233 (393)
T PRK05790 154 GYHMGITAENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTTAESLAKLR 233 (393)
T ss_pred CCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCCCCCceEecCCCCCCCCCCHHHHhCCC
Confidence 00000000 0000000 1
Q ss_pred --CcC-----CCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 018323 165 --FDC-----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQS 237 (358)
Q Consensus 165 --f~~-----~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~ 237 (358)
|+. ..+...++|||+++||++++.|++++.+++++|+|++.... .|.....+...+++++|+++|++|
T Consensus 234 ~v~~~~g~lt~~d~~~~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~-----~~~~~~~~~~~a~~~a~~~Agi~~ 308 (393)
T PRK05790 234 PAFDKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGV-----DPAIMGIGPVPAIRKALEKAGWSL 308 (393)
T ss_pred CccCCCCCEeCCcCCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccC-----CCCccchhHHHHHHHHHHHcCCCH
Confidence 110 01334579999999999999999999999899999988753 222233456789999999999999
Q ss_pred CCccEEEecCCCCCCCcHHHHHHHHHHhhcccCC-CCcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCC
Q 018323 238 HQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS-GSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLA 314 (358)
Q Consensus 238 ~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~-~~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~ 314 (358)
+|||++|+| |.+++..+...+..+ -..|++...+ .+||+.+|+|+.+++++++||+..
T Consensus 309 ~did~~e~~----------d~f~~~~l~~~e~lg~~~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~~~--------- 369 (393)
T PRK05790 309 ADLDLIEIN----------EAFAAQALAVEKELGLDPEKVNVNGGAIALGHPIGASGARILVTLLHEMKRR--------- 369 (393)
T ss_pred HHCCEEEeC----------cHHHHHHHHHHHHhCCChhhcCCCcchhhhCcchhhhHHHHHHHHHHHHHhc---------
Confidence 999999999 444444332222111 1245555555 779999999999999999999862
Q ss_pred CCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 315 KPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
+.+++|++..+-||..+++|||++
T Consensus 370 -------------------~~~~gl~~~~~~~g~g~~~~~e~~ 393 (393)
T PRK05790 370 -------------------GAKKGLATLCIGGGQGVALIVERP 393 (393)
T ss_pred -------------------CCCeEEEEEeccCCceeEEEEEcC
Confidence 247899999999999999999974
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.4e-27 Score=219.84 Aligned_cols=280 Identities=19% Similarity=0.208 Sum_probs=195.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+|||+++++|| ++++++.... .....++..+
T Consensus 27 t~~eL~~eA~~~Al~dAgl~~~dID-----~iv~~~~~~~------------------------------~~~~~la~~l 71 (384)
T PRK06158 27 SAMELLAQAAHRALADAGLTMADVD-----GLFTASPDDA------------------------------LWGLSVAEYL 71 (384)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEecCCCC------------------------------CcHHHHHHHc
Confidence 3578999999999999999999998 8888763200 0113588889
Q ss_pred CCCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEe-ecCCCcCh---------------------HHHHHHhhhcc
Q 018323 93 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAG-GTESSIDA---------------------LSMAGFCKSRA 149 (358)
Q Consensus 93 gl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~-g~e~~~~~---------------------~~~~~~~~~~~ 149 (358)
|+++ |.+.+.++|+|+..+|..|+++|++|.+|+|||+ +.+..... .....+....
T Consensus 72 Gl~~~~~~~~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~- 150 (384)
T PRK06158 72 GIRPRFVDGTMIGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAAR- 150 (384)
T ss_pred CCCCeeeccccCccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHH-
Confidence 9986 7788999999999999999999999999999986 55532210 0000000000
Q ss_pred cccccC------------------CCCCC----------------CCCCCcCCCCceeeecceEEEEeccHHHHHhcCCe
Q 018323 150 LTTKYN------------------GTPQE----------------ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAK 195 (358)
Q Consensus 150 l~~~~~------------------~~~~~----------------~~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~ 195 (358)
....++ .+|.. -+.|+.. .+...++||++|+||++++.|++++.+
T Consensus 151 ym~~yG~t~e~~a~vav~~~~~a~~NP~A~~~~~~t~e~vl~s~~ia~Pl~~-~d~~~~~DGAaAvVL~s~e~A~~l~~~ 229 (384)
T PRK06158 151 HMHQYGTTREQLAEVAVAARQWAQLNPEAFMRDPLTIDDVLAARMVSDPLSV-RDCCLVTDGAGAVVMVRADRARDLPRP 229 (384)
T ss_pred HHHHHCcCHHHHHHHHHHHHHHHhcCchhhhCCCCCHHHHhcCCccCCCCch-hhcCCccCCeEEEEEecHHHHhhcCCC
Confidence 000000 01110 1223332 345568999999999999999988766
Q ss_pred eeEEEEeeeeecCCCCCC-CCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHH-hhccc----
Q 018323 196 IYAEVRGYGMSGDAHHIT-QPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV-FSDHA---- 269 (358)
Q Consensus 196 ~~a~i~g~~~~~~~~~~~-~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~-~~~~~---- 269 (358)
+ ++|.|++..++..... .++........+++++|+++||+|+|||++|+|.+.+.. |...++.+ |+.+.
T Consensus 230 ~-v~i~g~~~~~~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~ElyD~Fs~~----~l~~~E~lG~~~~Ge~~~ 304 (384)
T PRK06158 230 P-VYVLGAAAATWHRQISSMPDLTVTAAAESGPRAFAMAGLTPADIDVVELYDAFTIN----TILFLEDLGFCAKGEGGA 304 (384)
T ss_pred c-EEEEEEEEecCCcccccccchhhhHHHHHHHHHHHHcCCCHHHCcEEEecCCchHH----HHHHHHHcCCCCCCcHHH
Confidence 5 6889988776654322 233334556789999999999999999999999766555 66666555 33331
Q ss_pred --------CCCCcceecccCC--cCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEE
Q 018323 270 --------TSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAAL 339 (358)
Q Consensus 270 --------~~~~~~v~~~k~~--~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 339 (358)
.++++|+|...+. .||+ +++|+.+++++++||++.. ...+..+.+++|
T Consensus 305 ~~~~G~~~~~G~~PvN~sGG~ls~Ghp-gatG~~~~~E~~~QLrg~a---------------------g~rQv~~a~~gl 362 (384)
T PRK06158 305 FVEGGRIAPGGRLPVNTNGGGLSCVHP-GMYGLFLLIEAVRQLRGEA---------------------GERQVAGAEVAL 362 (384)
T ss_pred HHHCCCCccCCCccccCCChhhcCCCC-chhhHHHHHHHHHHHcCCC---------------------CCCcCCCCCEEE
Confidence 2467899999995 5999 9999999999999998743 122233467899
Q ss_pred eeccc-cccceeeeEeee
Q 018323 340 SNSFG-FGGTNASLLFTK 356 (358)
Q Consensus 340 ~~~~g-~gG~~~~~il~~ 356 (358)
+++.| .+..++.+||++
T Consensus 363 ~~~~Gg~~~~~~~~vl~~ 380 (384)
T PRK06158 363 AHGNGGVLSSQATAILGT 380 (384)
T ss_pred EECCCCcccceEEEEEec
Confidence 98877 444555667765
|
|
| >PRK09050 beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-27 Score=221.72 Aligned_cols=271 Identities=23% Similarity=0.264 Sum_probs=197.2
Q ss_pred HHHHHHHHHHHHHH-HCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 14 FIAYALCAADEALH-DAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 14 ~~~l~~~aa~~Al~-dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
...|+.++.+++|+ |+|++++++| .|++|+..... .....++..++...
T Consensus 26 ~~~L~~~a~~~al~~~agi~~~~Id-----~v~~G~~~~~~-------------------------~~~~~~ar~~~~~~ 75 (401)
T PRK09050 26 ADDLGAVPLKALMARNPGVDWEAVD-----DVIYGCANQAG-------------------------EDNRNVARMSALLA 75 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCC-----EEEEEeccccc-------------------------cccchHHHHHHHHc
Confidence 37899999999999 6899999898 89999753210 00123455688999
Q ss_pred CCC--CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHH-----HHH-------hh--------h---
Q 018323 93 GFQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM-----AGF-------CK--------S--- 147 (358)
Q Consensus 93 gl~--gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~-----~~~-------~~--------~--- 147 (358)
|+. -|.++|+++|+||+.|+..|++.|++|++|++||+|+|+++..+.. ..+ .. .
T Consensus 76 Gl~~~vP~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (401)
T PRK09050 76 GLPVSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMK 155 (401)
T ss_pred CCCCCCceEEEecccccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchhhhcccCcccccccccccccCCccc
Confidence 994 3999999999999999999999999999999999999987653210 000 00 0
Q ss_pred cccc------------cccCC---------------------C-----------------------CCCCCC--------
Q 018323 148 RALT------------TKYNG---------------------T-----------------------PQEASR-------- 163 (358)
Q Consensus 148 ~~l~------------~~~~~---------------------~-----------------------~~~~~~-------- 163 (358)
.... .+++. + ++...|
T Consensus 156 ~~~~~~~Mg~~ae~~a~~~gisre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~~~~~~~~~~da~~r~~~t~e~l 235 (401)
T PRK09050 156 AQYGVDSMPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDPVVVDRDEHPRPETTLEAL 235 (401)
T ss_pred cccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccCCCCceeeCCCCCCCCCCCHHHH
Confidence 0000 01100 0 111111
Q ss_pred ----C-CcC-----CCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHc
Q 018323 164 ----P-FDC-----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQS 233 (358)
Q Consensus 164 ----p-f~~-----~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~a 233 (358)
| |+. ..+.-.++|||+++||++++.|++++.+++++|+|++..... |.....+...+++++|+++
T Consensus 236 ~~l~~~~~~~g~lt~~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~-----~~~~~~~~~~a~~~al~~A 310 (401)
T PRK09050 236 AKLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVE-----PRIMGIGPAPATRKLLARL 310 (401)
T ss_pred hcCCCcccCCCEEeCCCcCCCcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccC-----CccccchHHHHHHHHHHHc
Confidence 1 211 011222899999999999999999999999999999887542 2223345678999999999
Q ss_pred CCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCC---CCcceecccCC--cCCcccchhHHHHHHHHHHHHhCCCC
Q 018323 234 GLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS---GSLAFSSTKGA--IGHLLGAAGAVEAIFAVLAIHHGVAP 308 (358)
Q Consensus 234 gl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~---~~~~v~~~k~~--~Gh~~~asG~~~l~~~~~~l~~~~ip 308 (358)
||+++|||++|+| |.+++..+...+..+ ...|+|..++. +||+.+++|+..++++++||+++
T Consensus 311 gl~~~DId~~ei~----------D~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr~~--- 377 (401)
T PRK09050 311 GLTIDQFDVIELN----------EAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLERT--- 377 (401)
T ss_pred CCCHHHCCccccC----------cHhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHHhc---
Confidence 9999999999999 555443332222111 24799999995 89999999999999999999761
Q ss_pred CCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 309 LTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 309 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
..++.+++...-||...++|++++
T Consensus 378 -------------------------~~~~g~~~~c~~gG~g~a~~~e~~ 401 (401)
T PRK09050 378 -------------------------GGRYALCTMCIGVGQGIALAIERV 401 (401)
T ss_pred -------------------------CCCeEEEEEcccccceeEEEEEeC
Confidence 247789999999999999999874
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=225.98 Aligned_cols=290 Identities=17% Similarity=0.210 Sum_probs=196.9
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHH
Q 018323 12 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 91 (358)
Q Consensus 12 ~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 91 (358)
.+...|+.+|+++||+|||+++++++ .+++++.... ....+..+..++..
T Consensus 21 ~~~~~La~~A~~~Al~dAgl~~~dId-----~vi~~~~~~~-------------------------~~~~~~~a~~va~~ 70 (399)
T PRK06059 21 RDFVEYGVVAARAALADAGLDWRDVQ-----LVVGADTIRN-------------------------GYPGFVAGATFAQA 70 (399)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCC-------------------------ccCCccHHHHHHHH
Confidence 44588999999999999999988887 7777654311 00112235678999
Q ss_pred cCCCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChH-HH--H------HHhh---hcc---------
Q 018323 92 YGFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDAL-SM--A------GFCK---SRA--------- 149 (358)
Q Consensus 92 lgl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~-~~--~------~~~~---~~~--------- 149 (358)
+|+++ |.++++.+|+|++.+|..|+++|++|++|++||+|+|.+.... .. . .+.. .+.
T Consensus 71 lG~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~ 150 (399)
T PRK06059 71 LGWNGAPVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALL 150 (399)
T ss_pred hCCCCCceecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHH
Confidence 99987 8999999999999999999999999999999999999754310 00 0 0000 000
Q ss_pred ---cccccC------------------CCCCCCCC-CCc--------------CCCCceeeecceEEEEeccHHHHHhc-
Q 018323 150 ---LTTKYN------------------GTPQEASR-PFD--------------CGRDGFVIGEGSGVLVLEELEHAKKR- 192 (358)
Q Consensus 150 ---l~~~~~------------------~~~~~~~~-pf~--------------~~~~g~~~geGaaa~vL~~~~~A~~~- 192 (358)
..++++ .+|....| |++ ..-+...++|||+|+||.+++.|+++
T Consensus 151 a~~~~~~yg~s~e~~a~v~~~~~~~a~~Np~A~~r~~~t~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~ 230 (399)
T PRK06059 151 ARRRMDLYGATVEDFAQVKVKNARHGLLNPNARYRKEVTVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFARRHL 230 (399)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHccCcHhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEecHHHHHhhc
Confidence 000000 01111110 110 01133337999999999999999988
Q ss_pred -CCeeeEEEEeeeeecCCCC--C-CCC-----------CCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHH
Q 018323 193 -GAKIYAEVRGYGMSGDAHH--I-TQP-----------HIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVE 257 (358)
Q Consensus 193 -g~~~~a~i~g~~~~~~~~~--~-~~~-----------~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E 257 (358)
+.++.++|++++...+... . ..+ .+.......+++++|+++|++++|||++|+|...+.. |
T Consensus 231 ~~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~~a~~~agl~~~Did~~El~d~f~~~----~ 306 (399)
T PRK06059 231 GSVAGVPSVRAISTVTPRYPQHLPELPDIATDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEVYDLSTAL----E 306 (399)
T ss_pred cccCCceEEEEEEEecccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCcEEeecccChHH----H
Confidence 6566689999887653221 1 111 1111123567999999999999999999999554433 4
Q ss_pred HHHHHHH-hhcc------------cCCCCcceecccCC--cCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 018323 258 ATAIRTV-FSDH------------ATSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFND 322 (358)
Q Consensus 258 ~~a~~~~-~~~~------------~~~~~~~v~~~k~~--~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~ 322 (358)
...++.+ |..+ ..++++|||...+. +||+.+++|+.+++++++||++..
T Consensus 307 l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qLrg~a---------------- 370 (399)
T PRK06059 307 LDWYEHLGLCPKGEAEALLRSGATTLGGRIPVNPSGGLACFGEAIPAQAIAQVCELTWQLRGQA---------------- 370 (399)
T ss_pred HHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCccCCccHHHHHHHHHHHhccCc----------------
Confidence 4444433 1211 12456799999994 599999999999999999998743
Q ss_pred CCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 323 NFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 323 ~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
...+..+.+++++.+.|.+|..+++||++
T Consensus 371 -----g~~Qv~~a~~gl~~~~g~~g~~~~~~l~~ 399 (399)
T PRK06059 371 -----GGRQVEGARVGITANQGLFGHGSSVIVAR 399 (399)
T ss_pred -----CCccCCCccEEEEeccCCcccceEEEecC
Confidence 12223346788888888889999999875
|
|
| >PRK07661 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.2e-27 Score=220.15 Aligned_cols=270 Identities=23% Similarity=0.301 Sum_probs=192.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+|+|+.++++| .+++|+...+.. . ....+..++..+|
T Consensus 27 ~~eLa~~A~~~AL~~ag~~~~dID-----~vi~g~~~~~~~----------------------~---g~~~a~~~~~~lG 76 (391)
T PRK07661 27 PDDLGALVVKETLKRAGNYEGPID-----DLIIGCAMPEAE----------------------Q---GLNMARNIGALAG 76 (391)
T ss_pred HHHHHHHHHHHHHHhcCCChhHCC-----EEEEEecccccc----------------------c---cchHHHHHHHHcC
Confidence 478999999999999998778887 899987542110 0 0123446888999
Q ss_pred CC--CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHH-----------------H-HHHh-hhccccc
Q 018323 94 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS-----------------M-AGFC-KSRALTT 152 (358)
Q Consensus 94 l~--gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~-----------------~-~~~~-~~~~l~~ 152 (358)
+. -|.++|+++|+||+.|+..|++.|++|.+|++||+|+|+++..+. + ..+. ....+..
T Consensus 77 l~~~~p~~~V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~ 156 (391)
T PRK07661 77 LPYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGHVVRPNPRLVEAAPEYYMGMGHTAEQVAV 156 (391)
T ss_pred CCCCcceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCccccccCCCccccccccchhhhHHHHHHHHHH
Confidence 98 399999999999999999999999999999999999998653210 0 0000 0000000
Q ss_pred ccCC------------------CCC----------------------------------CCC------------CC-Cc-
Q 018323 153 KYNG------------------TPQ----------------------------------EAS------------RP-FD- 166 (358)
Q Consensus 153 ~~~~------------------~~~----------------------------------~~~------------~p-f~- 166 (358)
+++. .+. +.. +| |.
T Consensus 157 ~~g~tre~~a~~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~f~~ 236 (391)
T PRK07661 157 KYGISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFNV 236 (391)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeecccccccccCcccccceeEecCCCCCCCCCHHHHhcCCCCcCC
Confidence 0000 000 000 11 10
Q ss_pred ----CCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 018323 167 ----CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDY 242 (358)
Q Consensus 167 ----~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~ 242 (358)
...+...++|||+++||++++.|++++.+++++|+|++.... .|.....+...+++++|+++||+++|||+
T Consensus 237 ~g~lt~~~~~~~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~agl~~~did~ 311 (391)
T PRK07661 237 KGSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGV-----PPEVMGIGPIAAIPKALKLAGLELSDIGL 311 (391)
T ss_pred CCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecC-----CCcccchHHHHHHHHHHHHcCCCHHHCCE
Confidence 111222389999999999999999999999999999998864 23333456788999999999999999999
Q ss_pred EEecCCCCCCCcHHHHHHHHHHhhcccCCC-CcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Q 018323 243 VNAHATSTPLGDTVEATAIRTVFSDHATSG-SLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 319 (358)
Q Consensus 243 i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~-~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~ 319 (358)
+|+| |.+++..+...+..+. ..|++...+ .+||+.+|||+.+++++++||+.+
T Consensus 312 ~ei~----------d~f~~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~~~-------------- 367 (391)
T PRK07661 312 FELN----------EAFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKRR-------------- 367 (391)
T ss_pred EEeC----------CHHHHHHHHHHHHcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHHhc--------------
Confidence 9999 5555544433222111 134554444 779999999999999999999751
Q ss_pred CCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 320 FNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
+.++.+.+.+.-||...++||++
T Consensus 368 --------------~~~~g~~~~c~~gg~g~a~~~e~ 390 (391)
T PRK07661 368 --------------NEQFGIVTMCIGGGMGAAGVFEL 390 (391)
T ss_pred --------------CCCeEEEEEccccChhhEEEEEe
Confidence 24688999999999999999986
|
|
| >PRK07850 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=218.20 Aligned_cols=270 Identities=17% Similarity=0.184 Sum_probs=193.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcCC
Q 018323 15 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 94 (358)
Q Consensus 15 ~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 94 (358)
..|+.++++++|+|+|+++++++ .|++|+...... -...++..++...|+
T Consensus 27 ~eL~~~a~~~aL~~agi~~~~Id-----~v~~G~~~~~~~-------------------------q~~~~ar~~~l~~Gl 76 (387)
T PRK07850 27 AELLGAVQRAVLDRAGIDPGDVE-----QVIGGCVTQAGE-------------------------QSNNITRTAWLHAGL 76 (387)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecccccc-------------------------ccchHHHHHHHhCCC
Confidence 78999999999999999999898 899987531100 001234455666888
Q ss_pred C-C-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHH-HH-------------------HHhhhccccc
Q 018323 95 Q-G-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS-MA-------------------GFCKSRALTT 152 (358)
Q Consensus 95 ~-g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~-~~-------------------~~~~~~~l~~ 152 (358)
. + |.++|+++|+||+.|+..|++.|++|++|++||+|+|+++..+. .. .+.....+..
T Consensus 77 ~~~~p~~tV~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~~~ 156 (387)
T PRK07850 77 PYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGANAGPGRGLPRPDSWDIDMPNQFEAAERIAK 156 (387)
T ss_pred CCCCceEEEecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCcccccccccccCccccccccCcchHHHHHHHHHH
Confidence 7 3 89999999999999999999999999999999999998765321 00 0000000000
Q ss_pred ccCC-----------------------------------------CCCCC---------------------CCCCcC---
Q 018323 153 KYNG-----------------------------------------TPQEA---------------------SRPFDC--- 167 (358)
Q Consensus 153 ~~~~-----------------------------------------~~~~~---------------------~~pf~~--- 167 (358)
+++. +|... ...|..
T Consensus 157 ~ygisre~~d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~~~~~~~D~~~r~~t~e~l~~l~p~~~~~~~ 236 (387)
T PRK07850 157 RRGITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAGLKPVLEGGIH 236 (387)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCCCceEeecCCCcccCCHHHhccCCCCCCCCCc
Confidence 0000 00000 012211
Q ss_pred C-CCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEec
Q 018323 168 G-RDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAH 246 (358)
Q Consensus 168 ~-~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h 246 (358)
+ .+...++|||+++||.+++.|++++.++.++|.|++..... |.....+...+++++|+++|++++|||++|+|
T Consensus 237 t~~~~~~~sDGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~did~~ei~ 311 (387)
T PRK07850 237 TAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAE-----PYYHLDGPVQATAKVLEKAGMKIGDIDLVEIN 311 (387)
T ss_pred cchhcCCcCCceEEEEEecHHHHHHcCCCCcEEEEEEEEeccC-----chhhcchHHHHHHHHHHHcCCCHHHcCeeeec
Confidence 0 13334789999999999999999998888999999875431 22233456789999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHHHHhhcccCC-CCcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCC
Q 018323 247 ATSTPLGDTVEATAIRTVFSDHATS-GSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDN 323 (358)
Q Consensus 247 ~~gt~~~d~~E~~a~~~~~~~~~~~-~~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~ 323 (358)
|.+++..+...+..+ ..-|+|...+ .+||+.+++|+..++++++||+.+
T Consensus 312 ----------d~F~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~------------------ 363 (387)
T PRK07850 312 ----------EAFASVVLSWAQVHEPDMDKVNVNGGAIALGHPVGSTGARLITTALHELERT------------------ 363 (387)
T ss_pred ----------ccchHHHHHHHHHcCCCCCCcCCCCchhhcCCCcchhHHHHHHHHHHHHHhc------------------
Confidence 666655554322221 1137887777 669999999999999999999752
Q ss_pred CCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 324 FMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 324 ~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
..++.+++..+-||...++||+++
T Consensus 364 ----------~~~~g~~~~c~~gg~g~a~~~e~~ 387 (387)
T PRK07850 364 ----------DKSTALITMCAGGALSTGTIIERI 387 (387)
T ss_pred ----------CCCeEEEEEccccCceeEEEEEeC
Confidence 246788888999999999999874
|
|
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.3e-27 Score=219.80 Aligned_cols=271 Identities=21% Similarity=0.216 Sum_probs=193.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|++++|+++|++++++| .|++|+...... .....+...+...|
T Consensus 28 ~~dLa~~A~~~al~~agi~p~~ID-----~vi~G~~~~~~~-------------------------~~~~~~r~a~~~~G 77 (402)
T PRK08242 28 PVRLAAGLLEALRDRNGLDTAAVD-----DVVLGCVTPVGD-------------------------QGADIARTAVLAAG 77 (402)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcC-----EEEEEecCCCcc-------------------------ccccHHHHHHHHcC
Confidence 457889999999999999999998 899988652110 01223444557778
Q ss_pred CC--CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHH-H----------HH----Hh----hhccccc
Q 018323 94 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS-M----------AG----FC----KSRALTT 152 (358)
Q Consensus 94 l~--gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~-~----------~~----~~----~~~~l~~ 152 (358)
+. -|+++|+.+|+|++.||..|+++|++|.+|++|++|+|+++..+. . .. +. ....+..
T Consensus 78 l~~~~pa~~Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~a~ 157 (402)
T PRK08242 78 LPETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSDGGAWAMDPSTNFPTYFVPQGISADLIAT 157 (402)
T ss_pred CCCCCCeEEEcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCCcccccCcccccCcccccccccCCHHHHHHHHHH
Confidence 83 389999999999999999999999999999999999998765321 0 00 00 0000000
Q ss_pred ccC-----------------------------------------CCCCCCCC------------C-CcCCC---------
Q 018323 153 KYN-----------------------------------------GTPQEASR------------P-FDCGR--------- 169 (358)
Q Consensus 153 ~~~-----------------------------------------~~~~~~~~------------p-f~~~~--------- 169 (358)
+++ .++++..| | |+...
T Consensus 158 ~~gisRe~~d~~A~~Sh~~A~~A~~~g~f~~ei~pv~~~~~~~~~~~de~~r~~~t~e~l~~l~p~f~~~~~~~g~~~~~ 237 (402)
T PRK08242 158 KYGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPVKDQNGLTILDHDEHMRPGTTMESLAKLKPSFAMMGEMGGFDAVA 237 (402)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeecCCCCEeeCCCCCCCCCCCHHHHhCCCCCccCccccCcccccc
Confidence 000 01222222 2 33210
Q ss_pred -----------------CceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHH
Q 018323 170 -----------------DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 232 (358)
Q Consensus 170 -----------------~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 232 (358)
+.-.++|||+++||++++.|+++|.+++++|.|++...+. |.....+...+++++|++
T Consensus 238 ~~~~~~~~~~~~~vTagn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~-----~~~~~~~~~~a~~~al~~ 312 (402)
T PRK08242 238 LQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSD-----PTIMLTGPVPATRKALAK 312 (402)
T ss_pred cccccccccccCceecCcCCCCCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecCC-----chhhcccHHHHHHHHHHH
Confidence 2224899999999999999999999999999999887642 222233446799999999
Q ss_pred cCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCC---CCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCC
Q 018323 233 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS---GSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPL 309 (358)
Q Consensus 233 agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~---~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp 309 (358)
+|++++|||++|+| |.+++..+...+..+ .++.++..+..+||+.+|+|+..++.++++|+.+
T Consensus 313 AGl~~~DID~~ei~----------daFa~~~l~~~e~lG~~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~~---- 378 (402)
T PRK08242 313 AGLTVDDIDLFELN----------EAFASVVLRFMQALDIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDELERR---- 378 (402)
T ss_pred cCCCHHHCCEEEec----------chhhHHHHHHHHHhCCCCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHhc----
Confidence 99999999999999 666554443322221 2333444444889999999999999999999751
Q ss_pred CCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 310 TLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
+.++.+++...-||...++||++.
T Consensus 379 ------------------------~~~~g~~~~c~ggG~g~a~~~e~~ 402 (402)
T PRK08242 379 ------------------------GKRTALITLCVGGGMGIATIIERV 402 (402)
T ss_pred ------------------------CCCeEEEEEcccCCceeEEEEEeC
Confidence 247899999999999999999873
|
|
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.9e-27 Score=220.16 Aligned_cols=270 Identities=21% Similarity=0.276 Sum_probs=197.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
..+|+.+|+++||+|+|+++++|| ++++|+..... .....+..++..+|
T Consensus 26 ~~~L~~~a~~~al~dagi~~~dID-----~vi~g~~~~~~--------------------------~~~~~a~~~~~~~G 74 (388)
T PRK06366 26 APQLGGAAIKAVIDDAKLDPALVQ-----EVIMGNVIQAG--------------------------VGQNPAGQAAYHAG 74 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCCC--------------------------ccCcHHHHHHHHCC
Confidence 477999999999999999999998 99998653110 00112456788999
Q ss_pred CCC--CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHH-----H--H---H------Hhh----h----
Q 018323 94 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS-----M--A---G------FCK----S---- 147 (358)
Q Consensus 94 l~g--p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~-----~--~---~------~~~----~---- 147 (358)
+.. |.++++.+|+|++.|+..|+++|++|++|++||+|+|+++..+. . . . ... .
T Consensus 75 l~~~~p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 154 (388)
T PRK06366 75 LPFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLID 154 (388)
T ss_pred CCCCCcceeeechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCccc
Confidence 974 99999999999999999999999999999999999998552110 0 0 0 000 0
Q ss_pred -------cc----cccccCC------------------CCCC-CC----CCC------------------------cC--
Q 018323 148 -------RA----LTTKYNG------------------TPQE-AS----RPF------------------------DC-- 167 (358)
Q Consensus 148 -------~~----l~~~~~~------------------~~~~-~~----~pf------------------------~~-- 167 (358)
.. ...+++. .|.. .. .|| +.
T Consensus 155 ~~~~~~mal~A~~~~~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~~~~~d~~~r~~t~e~~~~s~~v~~p~g 234 (388)
T PRK06366 155 AFYFEHMGVSAERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFNDLDRDEGIRKTTMEDLAKLPPAFDKNG 234 (388)
T ss_pred cccCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhHhcCCcccccccccccccccCcccCCHHHHhhCCCccCCCC
Confidence 00 0000100 1110 00 011 10
Q ss_pred ---CCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEE
Q 018323 168 ---GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVN 244 (358)
Q Consensus 168 ---~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~ 244 (358)
..+.-.++|||+++||.+++.|++.+.++.++|+|++...... .........+++++|+++||+++|||++|
T Consensus 235 ~lt~~d~s~~sDGAaAvvl~See~A~~l~~~pv~~I~g~~~~~~~~-----~~~~~~~~~A~~~al~~Agl~~~DiDv~E 309 (388)
T PRK06366 235 ILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDP-----LDFVEAPIPATRKLLEKQNKSIDYYDLVE 309 (388)
T ss_pred CEehhhcCCcccceeEEEEecHHHHHHcCCCcCEEEEEEEEEecCH-----HHhcccHHHHHHHHHHHcCCCHHHcceee
Confidence 0112226999999999999999999988988999998876421 11122236899999999999999999999
Q ss_pred ecCCCCCCCcHHHHHHHHHHhhcccC--CCCcceecccCC--cCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Q 018323 245 AHATSTPLGDTVEATAIRTVFSDHAT--SGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF 320 (358)
Q Consensus 245 ~h~~gt~~~d~~E~~a~~~~~~~~~~--~~~~~v~~~k~~--~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~ 320 (358)
+| |.+++..+...+.. ++. +||...+. +|||.+|||+..+++++.||+..
T Consensus 310 i~----------daFa~~~l~~le~lgl~g~-~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~~--------------- 363 (388)
T PRK06366 310 HN----------EAFSIASIIVRDQLKIDNE-RFNVNGGAVAIGHPIGNSGSRIIVTLINALKTR--------------- 363 (388)
T ss_pred cc----------chhHHHHHHHHHHhCCCCC-ccCCCCchhhhCCCcCCCHHHHHHHHHHHHHhc---------------
Confidence 99 88888777655443 345 88988884 59999999999999999999751
Q ss_pred CCCCCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 321 NDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
..++.+++...-||...++||++.+
T Consensus 364 -------------~~~~g~~~~c~~gg~g~a~~~e~~~ 388 (388)
T PRK06366 364 -------------HMKTGLATLCHGGGGAHTLTLEMVE 388 (388)
T ss_pred -------------CCCeEEEEEecccChhhEEEEEecC
Confidence 2477899999999999999999864
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-26 Score=218.43 Aligned_cols=286 Identities=19% Similarity=0.180 Sum_probs=191.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
+...|+.+++++||+|+|+++++|| ++++|+....+. .. .....++..+
T Consensus 26 ~~~~L~~ea~~~AL~dagl~~~dID-----~v~vg~~~~~~~----------------------~~----~~~~~~a~~l 74 (398)
T PRK06157 26 GAEDLMVEAFLEALADAGIEPKDID-----AAWFGTHYDEIG----------------------SG----KSGTPLSRAL 74 (398)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecccccc----------------------cc----chhHHHHHHc
Confidence 3578999999999999999999998 899886431100 00 0113477789
Q ss_pred CCCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHH---H-----HHhh----------h----cc
Q 018323 93 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM---A-----GFCK----------S----RA 149 (358)
Q Consensus 93 gl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~---~-----~~~~----------~----~~ 149 (358)
|+.+ |.++|+.+|+|++.+|..|++.|++|++|++||+|+|++...... . .+.. . ..
T Consensus 75 Gl~~~~~~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~ 154 (398)
T PRK06157 75 RLPNIPVTRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPVANPGTLADMTMPNVTAPGNFAQLASA 154 (398)
T ss_pred CCCCCCEEEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccccccccchhcccccCchHHHHHHHHHH
Confidence 9986 888999999999999999999999999999999999985431100 0 0000 0 00
Q ss_pred cccccCC----------------------CCCCC------------CC----CCcCCCCceeeecceEEEEeccHHHHHh
Q 018323 150 LTTKYNG----------------------TPQEA------------SR----PFDCGRDGFVIGEGSGVLVLEELEHAKK 191 (358)
Q Consensus 150 l~~~~~~----------------------~~~~~------------~~----pf~~~~~g~~~geGaaa~vL~~~~~A~~ 191 (358)
...+++. +|... ++ |+. .-+...++|||+|+||.+++.|++
T Consensus 155 ~~~~yG~t~e~~~~~~a~vav~~~~~A~~np~A~~r~~~t~e~v~~s~~v~~Pl~-~~d~~~~~DGAaA~vl~s~~~A~~ 233 (398)
T PRK06157 155 YAAKYGVSREDLKRAMAHVSVKSHANGARNPKAHLRKAVTEEQVLKAPMIAGPLG-LFDCCGVSDGAAAAIVTTPEIARA 233 (398)
T ss_pred HHHHhCCCHHHHcccccHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCc-hhccCCCCCccEEEEEecHHHHHh
Confidence 0000000 11100 11 111 123334799999999999999999
Q ss_pred cCCeeeEEEEeeeeecCCCCC-----CCCCCChHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCCCCcHHHHHHHHHH
Q 018323 192 RGAKIYAEVRGYGMSGDAHHI-----TQPHIDGKGAILAMTRALKQSGLQ--SHQVDYVNAHATSTPLGDTVEATAIRTV 264 (358)
Q Consensus 192 ~g~~~~a~i~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~al~~agl~--~~did~i~~h~~gt~~~d~~E~~a~~~~ 264 (358)
.+.++.++|+|++...+.... ..+. .......+++++|+++||+ ++|||++|+|...+.. |...++.+
T Consensus 234 l~~~~~v~I~g~~~~~~~~~~~~~~~~~~~-~~~~~~~aa~~a~~~AGl~~~~~Did~~Ei~D~Fs~~----~l~~~e~l 308 (398)
T PRK06157 234 LGKKDPVYVKALQLAVSNGWELQYNGWDGS-YFPTTRIAARKAYREAGITDPREELSMAEVHDCFSIT----ELVTMEDL 308 (398)
T ss_pred hCCCCCeEEEEEEEeccccccccccccccc-ccHHHHHHHHHHHHHcCCCCchhcCCEEEEecCChHH----HHHHHHHc
Confidence 987566899999876543211 1121 1223457899999999998 7999999999554443 44444443
Q ss_pred -hhccc------------CCCCcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCcccc
Q 018323 265 -FSDHA------------TSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTA 329 (358)
Q Consensus 265 -~~~~~------------~~~~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~ 329 (358)
|+.+. .++++|+|...+ .+||+.+|+|+..++++++||+... ..
T Consensus 309 Gl~~~Ge~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~a---------------------g~ 367 (398)
T PRK06157 309 GLSERGQAWRDVLDGFFDADGGLPCQIDGGLKCFGHPIGASGLRMLYEMYLQLLGRA---------------------GE 367 (398)
T ss_pred CCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCcccHhHHHHHHHHHHHhcccc---------------------cC
Confidence 22221 146789999999 4599999999999999999998753 12
Q ss_pred CCCCCCcEEEeecccc---ccceeeeEeee
Q 018323 330 SKDMPISAALSNSFGF---GGTNASLLFTK 356 (358)
Q Consensus 330 ~~~~~~~~~l~~~~g~---gG~~~~~il~~ 356 (358)
.+..+.+++++++.|- |..+...||.+
T Consensus 368 rQv~~a~~~l~~~~gg~~~~~~~~~~~~~~ 397 (398)
T PRK06157 368 RQLKNPRLALTHNLGGAPGQNVCSVSIVGR 397 (398)
T ss_pred ccCCCccEEEEeccCCcCCCCEEEEEEEec
Confidence 2334468899988773 33444444443
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-26 Score=218.12 Aligned_cols=280 Identities=24% Similarity=0.325 Sum_probs=199.2
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
+...|+.+|+++||+|+|+++++++ ++++++..... ....++.+++..+
T Consensus 15 ~~~eL~~~A~~~Al~dagl~~~~Id-----~vi~g~~~~~~--------------------------~~~~~a~~va~~l 63 (375)
T cd00829 15 SPLELAAEAARAALDDAGLEPADID-----AVVVGNAAGGR--------------------------FQSFPGALIAEYL 63 (375)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEecccccc--------------------------cccchHHHHHHHc
Confidence 3578999999999999999988887 88888754211 0123567899999
Q ss_pred CCC-CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHH---------Hh---hhccc---------
Q 018323 93 GFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAG---------FC---KSRAL--------- 150 (358)
Q Consensus 93 gl~-gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~---------~~---~~~~l--------- 150 (358)
|+. .|.++++.+|+|++.++..|+++|++|++|++||+|+|.+........ +. ....+
T Consensus 64 Gl~~~~~~~v~~~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 143 (375)
T cd00829 64 GLLGKPATRVEAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALA 143 (375)
T ss_pred CCCCcceeeEeCccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHH
Confidence 996 489999999999999999999999999999999999997654321000 00 00000
Q ss_pred ----ccccCC------------------CCCCC----------------CCCCcCCCCceeeecceEEEEeccHHHHHhc
Q 018323 151 ----TTKYNG------------------TPQEA----------------SRPFDCGRDGFVIGEGSGVLVLEELEHAKKR 192 (358)
Q Consensus 151 ----~~~~~~------------------~~~~~----------------~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~ 192 (358)
...++. .|... +.|+. ..+...++||++++||++++.|+++
T Consensus 144 a~~~~~~~g~t~e~~~~va~~~~~~A~~np~A~~~~~~t~d~~~~~~~i~~pl~-~~~~~~~~DGaaa~vl~s~~~a~~~ 222 (375)
T cd00829 144 ARRYMHRYGTTREDLAKVAVKNHRNAARNPYAQFRKPITVEDVLNSRMIADPLR-LLDCCPVSDGAAAVVLASEERAREL 222 (375)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCc-hhhcCCCCCceeEEEEecHHHHhhc
Confidence 000000 01000 11222 1334458999999999999999988
Q ss_pred CCeeeEEEEeeeeecCCCCCCCCC--CChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHH-hhccc
Q 018323 193 GAKIYAEVRGYGMSGDAHHITQPH--IDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV-FSDHA 269 (358)
Q Consensus 193 g~~~~a~i~g~~~~~~~~~~~~~~--~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~-~~~~~ 269 (358)
.+++++|+|++..++..+....+ ....+...+++++|+++|++++|||++|+|.+.+.. +...++.+ |+.+.
T Consensus 223 -~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d~F~~~----~l~~~e~lGl~~~g 297 (375)
T cd00829 223 -TDRPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYDCFTIA----ELLALEDLGFCEKG 297 (375)
T ss_pred -CCCCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH----HHHHHHHcCCCCCC
Confidence 67789999999988766544332 245677899999999999999999999999666554 55555544 22211
Q ss_pred ------------CCCCcceecccCC--cCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCC
Q 018323 270 ------------TSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPI 335 (358)
Q Consensus 270 ------------~~~~~~v~~~k~~--~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (358)
.++.+|+|..++. +||+.+++|+..++++++||+... ...+..+.
T Consensus 298 ~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qlrg~a---------------------g~~qv~~~ 356 (375)
T cd00829 298 EGGKLVREGDTAIGGDLPVNTSGGLLSKGHPLGATGLAQAVEAVRQLRGEA---------------------GARQVPGA 356 (375)
T ss_pred chHHHHHCCCccCCCCccccCCCchhcCCCCccHHHHHHHHHHHHHhcCCc---------------------ccccCCCc
Confidence 1345799999995 599999999999999999998743 11122346
Q ss_pred cEEEeecccccccee
Q 018323 336 SAALSNSFGFGGTNA 350 (358)
Q Consensus 336 ~~~l~~~~g~gG~~~ 350 (358)
+++++++.|-.+.+.
T Consensus 357 ~~~l~~~~gg~~~~~ 371 (375)
T cd00829 357 RVGLAHNIGGTGSAA 371 (375)
T ss_pred cEEEEecCCCccceE
Confidence 888888776444433
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-26 Score=217.37 Aligned_cols=270 Identities=20% Similarity=0.214 Sum_probs=188.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+|+|+++++|+ .|++|+...... ....+...+..+|
T Consensus 31 ~~eL~~~a~~~aL~~Agi~~~dID-----~vi~G~~~~~~~--------------------------~~~~~~~~~l~ag 79 (397)
T PRK06954 31 APQLGAAAIAAAVERAGLKPEQID-----EVVMGCVLPAGQ--------------------------GQAPARQAALGAG 79 (397)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcC-----EEEEEecCCCcc--------------------------chHHHHHHHHcCC
Confidence 388999999999999999999998 899987542110 0112223344456
Q ss_pred CC--CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHH----------------HHHH--hh----h--
Q 018323 94 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS----------------MAGF--CK----S-- 147 (358)
Q Consensus 94 l~--gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~----------------~~~~--~~----~-- 147 (358)
+. -|+++|+.+|+||+.|+..|+++|++|++|++||+|+|+++.... ...+ .. .
T Consensus 80 ~~~~~p~~~V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (397)
T PRK06954 80 LPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDK 159 (397)
T ss_pred CCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhccccccccccc
Confidence 54 478999999999999999999999999999999999998763210 0000 00 0
Q ss_pred --------cccccccCCC-------------------CCC----CCCCCcC-----------------------------
Q 018323 148 --------RALTTKYNGT-------------------PQE----ASRPFDC----------------------------- 167 (358)
Q Consensus 148 --------~~l~~~~~~~-------------------~~~----~~~pf~~----------------------------- 167 (358)
.....+++.+ +.. ...|+..
T Consensus 160 ~~~~~~~a~~~~~~ygitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~~~~~~v~~D~~pr~~~~~~l~~l~~~ 239 (397)
T PRK06954 160 GRLMGTFAEECAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGDTVIDRDEQPFKANPEKIPTLKPA 239 (397)
T ss_pred CCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEeccCCCCeEeccCCCcCCCCHHHHhCCCCc
Confidence 0000011000 000 0011110
Q ss_pred --------CCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 018323 168 --------GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQ 239 (358)
Q Consensus 168 --------~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~d 239 (358)
..+.-.++|||+++||++++.|++++.+++++|.|++.... .|.....+...+++++|+++||+++|
T Consensus 240 f~~~g~lt~~~~~~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~agl~~~D 314 (397)
T PRK06954 240 FSKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQ-----APSKFTTAPVGAIRKLFEKNGWRAAE 314 (397)
T ss_pred cCCCCcEEccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEeccc-----CcccccchHHHHHHHHHHHcCCCHHH
Confidence 00112269999999999999999999999999998776432 12112235578999999999999999
Q ss_pred ccEEEecCCCCCCCcHHHHHHHHHHhhcccCC---CCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCC
Q 018323 240 VDYVNAHATSTPLGDTVEATAIRTVFSDHATS---GSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKP 316 (358)
Q Consensus 240 id~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~---~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~ 316 (358)
||++|+| |.+++..++..+..+ .++.++..+..+||+.+|||+.+++++++||+..
T Consensus 315 id~~ei~----------d~fa~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~~~----------- 373 (397)
T PRK06954 315 VDLFEIN----------EAFAVVTMAAMKEHGLPHEKVNVNGGACALGHPIGASGARILVTLIGALRAR----------- 373 (397)
T ss_pred CCEEehh----------hHHHHHHHHHHHHhCCCcccCCcCCChHHhcccHHHHHHHHHHHHHHHHHhc-----------
Confidence 9999999 888777665433221 2333344444789999999999999999999762
Q ss_pred CCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 317 DPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
..++.+++.+.-||...++||++.
T Consensus 374 -----------------~g~~~v~~~c~~gg~g~a~~~e~~ 397 (397)
T PRK06954 374 -----------------GGKRGVASLCIGGGEATAMGIELI 397 (397)
T ss_pred -----------------CCCeEEEEEccccchhhEEEEEeC
Confidence 135678888889999999999863
|
|
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=219.40 Aligned_cols=271 Identities=20% Similarity=0.294 Sum_probs=193.5
Q ss_pred HHHHHHHHHHHHHHHC-CCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 14 FIAYALCAADEALHDA-KWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dA-G~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
...|+.+|+++||+|+ |+++++|| ++++|+..... ..+ ...+..++..+
T Consensus 27 ~~eL~~~A~~~AL~da~gl~~~dID-----~vv~g~~~~~~----------------------~~g---~~~~~~~a~~l 76 (406)
T PRK07851 27 PDDLAAQMVRAALDKVPALDPTDID-----DLMLGCGLPGG----------------------EQG---FNMARVVAVLL 76 (406)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCC-----EEEEEcccccc----------------------ccc---CCHHHHHHHHc
Confidence 3789999999999997 99999998 88888542100 000 12345789999
Q ss_pred CCCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHH-------------HH---------------H
Q 018323 93 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS-------------MA---------------G 143 (358)
Q Consensus 93 gl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~-------------~~---------------~ 143 (358)
|+++ |.++++.+|+|+..|+..|+++|++|.+|++||+|+|++..... +. .
T Consensus 77 Gl~~~p~~~v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (406)
T PRK07851 77 GYDFLPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEA 156 (406)
T ss_pred CCCCCCeeeeeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhhccccccccccccccc
Confidence 9976 89999999999999999999999999999999999986432110 00 0
Q ss_pred Hhh----------hccc-------------c--------------------cc-cCC--C----C-------CCCC----
Q 018323 144 FCK----------SRAL-------------T--------------------TK-YNG--T----P-------QEAS---- 162 (358)
Q Consensus 144 ~~~----------~~~l-------------~--------------------~~-~~~--~----~-------~~~~---- 162 (358)
+.. ...+ . .. +.. . | +...
T Consensus 157 ~~~~~g~~~~~~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~~~~~~~d~~~r~~~ 236 (406)
T PRK07851 157 WHDPREDGLLPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDGTVVSTDDGPRAGT 236 (406)
T ss_pred ccccccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCCCceeCCCCCccCCc
Confidence 000 0000 0 00 000 0 0 0001
Q ss_pred --------CCC-cC-----CCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHH
Q 018323 163 --------RPF-DC-----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTR 228 (358)
Q Consensus 163 --------~pf-~~-----~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (358)
+|. +. ..+...++||++++||++++.|++++.+++++|+|++...+. |+....+...++++
T Consensus 237 t~e~v~~s~~v~~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~~-----~~~~~~~~~~a~~~ 311 (406)
T PRK07851 237 TYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLS-----PEIMGLGPVEASKQ 311 (406)
T ss_pred CHHHHhcCCCccCCCCcEecCcCCccCCceeEEEEccHHHHHHcCCCccEEEEEEEEccCC-----CCccchhHHHHHHH
Confidence 111 00 012233799999999999999999999999999999876542 22333456789999
Q ss_pred HHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCC-CcceecccC--CcCCcccchhHHHHHHHHHHHHhC
Q 018323 229 ALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSG-SLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHG 305 (358)
Q Consensus 229 al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~-~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~ 305 (358)
+|+++|++++|||++|+| |.+++..+...+..+- +.|++...+ .+||+.+++|+.+++++++||+.+
T Consensus 312 al~~Agi~~~did~~ei~----------d~f~~~~l~~le~lg~~~~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL~~~ 381 (406)
T PRK07851 312 ALARAGMSIDDIDLVEIN----------EAFAAQVLPSARELGIDEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQTH 381 (406)
T ss_pred HHHHhCCCHHHCCeehhh----------hHHHHHHHHHHHHhCCCccccCCCCChHhhcCcHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999 7777766643322211 125555554 779999999999999999999751
Q ss_pred CCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 306 VAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 306 ~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
+.++.|+..++-||...++||+++
T Consensus 382 ----------------------------~~~~g~~~~~~~gg~g~a~~~e~~ 405 (406)
T PRK07851 382 ----------------------------DKTFGLETMCVGGGQGMAMVLERL 405 (406)
T ss_pred ----------------------------CCCeEEEEEccccChhhEEEEEec
Confidence 236789999999999999999986
|
|
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-26 Score=217.80 Aligned_cols=274 Identities=19% Similarity=0.277 Sum_probs=196.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+|+|+++++|| .|++|+...... .....+..++..+|
T Consensus 71 ~~eLa~eA~~~AL~dAgl~~~dID-----~vv~G~~~~~~~-------------------------~~~~~~r~~a~~~G 120 (452)
T PLN02287 71 PDDLLAPVLKAVVEKTGLNPSEVG-----DIVVGTVLAPGS-------------------------QRANECRMAAFYAG 120 (452)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeecCccc-------------------------ccchHHHHHHHHCC
Confidence 488999999999999999999998 899887542110 00112235667789
Q ss_pred CCC--CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHH------H---h-------hhcc----cc
Q 018323 94 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAG------F---C-------KSRA----LT 151 (358)
Q Consensus 94 l~g--p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~------~---~-------~~~~----l~ 151 (358)
+.. |.++|+.+|+|++.|+..|++.|++|.+|++||+|+|.++..+.... + . .++. ..
T Consensus 121 l~~~~pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvvLv~GvE~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~y~ 200 (452)
T PLN02287 121 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLPMGITSENVA 200 (452)
T ss_pred CCCCcceEEEeccCchHHHHHHHHHHHHHcCCCCeEEEEeEEecCCCchhhccccCchhhccccccccCcCHHHHHHHHH
Confidence 974 88999999999999999999999999999999999998654321000 0 0 0000 00
Q ss_pred cccCC------------------CCC-----CCC--------------------------------------CC-CcC--
Q 018323 152 TKYNG------------------TPQ-----EAS--------------------------------------RP-FDC-- 167 (358)
Q Consensus 152 ~~~~~------------------~~~-----~~~--------------------------------------~p-f~~-- 167 (358)
..++. .+. ... +| |+.
T Consensus 201 ~~yGitrE~la~vAvksh~nAa~np~ag~f~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~v~~~~g 280 (452)
T PLN02287 201 ERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNG 280 (452)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeeeeccccccccCCccceeecccCCCCCCCCHHHHhcCCCccCCCC
Confidence 00000 000 000 00 110
Q ss_pred ---CCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEE
Q 018323 168 ---GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVN 244 (358)
Q Consensus 168 ---~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~ 244 (358)
..+.-.++|||+++||++++.|++++.+|++++.++.... ..|.....+...+++++|+++||+++|||++|
T Consensus 281 ~lt~~~~s~~sDGAaalvl~see~A~~~~~~~~a~~~~~~~~~-----~~~~~~~~~~~~A~~~al~~Agl~~~DID~~E 355 (452)
T PLN02287 281 TTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVG-----VDPAVMGIGPAVAIPAAVKAAGLELDDIDLFE 355 (452)
T ss_pred CEeccccCCcCCceEEEEEeeHHHHHHCCCCeEEEEEEEeecc-----CCCccchHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 0123348999999999999999999999999998877442 12444455678899999999999999999999
Q ss_pred ecCCCCCCCcHHHHHHHHHHhhcccCCC-CcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCC
Q 018323 245 AHATSTPLGDTVEATAIRTVFSDHATSG-SLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFN 321 (358)
Q Consensus 245 ~h~~gt~~~d~~E~~a~~~~~~~~~~~~-~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~ 321 (358)
+| |.+++..++..+..+. +.|++...+ .+||+.+|||+.+++++++||+..
T Consensus 356 i~----------daFa~~~l~~~e~lG~~~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~~~---------------- 409 (452)
T PLN02287 356 IN----------EAFASQFVYCCKKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRR---------------- 409 (452)
T ss_pred ec----------chHHHHHHHHHHHcCCCccccCCCCcHHhccCcHHHHHHHHHHHHHHHHHhc----------------
Confidence 99 8888888875443321 235555555 679999999999999999999751
Q ss_pred CCCCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 322 DNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 322 ~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
....+++++..+.-||...++||++.+
T Consensus 410 ----------~~~~~~gl~~~c~ggG~g~a~~ie~~~ 436 (452)
T PLN02287 410 ----------GKDCRFGVVSMCIGTGMGAAAVFERGD 436 (452)
T ss_pred ----------CCCCCeeEEEEccccCceeEEEEEecC
Confidence 111377899999999999999999863
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-26 Score=214.70 Aligned_cols=282 Identities=20% Similarity=0.223 Sum_probs=194.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+|||+++++|| +++..... .. . ....++..+|
T Consensus 25 ~~~L~~eA~~~Al~DAgl~~~dID-----~~~~~~~~---------------------~~-----~----~~~~~~~~lG 69 (388)
T PRK08142 25 VAQLHAEVAKGALADAGLSLADVD-----GYFCAGDA---------------------PG-----L----GPASMVDYLG 69 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEcCCC---------------------CC-----c----cHHHHHHhCC
Confidence 478999999999999999998897 66542110 00 0 0124889999
Q ss_pred CCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHH-------H------HHhhh-cc---------
Q 018323 94 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM-------A------GFCKS-RA--------- 149 (358)
Q Consensus 94 l~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~-------~------~~~~~-~~--------- 149 (358)
+++ |...+.++|+|+..++..|++.|++|.+|+|||++.|.+...... . .+... +.
T Consensus 70 l~~~~~~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~ 149 (388)
T PRK08142 70 LKLRHVDSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYAMC 149 (388)
T ss_pred CCCeeeccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCccccccccccccccccchhcccccccHHHHHHH
Confidence 986 788899999999999999999999999999999999874321000 0 00000 00
Q ss_pred ---cccccC------------------CCCCCC----------------CCCCcCCCCceeeecceEEEEeccHHHHHhc
Q 018323 150 ---LTTKYN------------------GTPQEA----------------SRPFDCGRDGFVIGEGSGVLVLEELEHAKKR 192 (358)
Q Consensus 150 ---l~~~~~------------------~~~~~~----------------~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~ 192 (358)
....++ .+|... +.|+. ..+...++|||+|+||++++.|++.
T Consensus 150 a~~ym~~yG~t~e~la~vav~~~~~A~~NP~A~~r~~~t~e~vl~s~~Ia~Pl~-l~d~~~~~DGAaA~vl~s~~~A~~l 228 (388)
T PRK08142 150 AMRHMHEYGTTSEQLAWIKVAASHHAQHNPHAMLRDVVTVEDVLNSPMIADPLH-RLDCCVVTDGGGALVVVRPEIARSL 228 (388)
T ss_pred HHHHHHHHCcCHHHHHHHHHHHHHHhccCChhhcCCCCCHHHHhcCCcccCCch-hhccCcccCceEEEEEecHHHHhhc
Confidence 000000 011100 11221 1233347999999999999999988
Q ss_pred CCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHH-hhccc--
Q 018323 193 GAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV-FSDHA-- 269 (358)
Q Consensus 193 g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~-~~~~~-- 269 (358)
+. +.++|+|++..++..+...++........+++++|+++|++++|||++|+|.+.+.. |...++.+ |+.+.
T Consensus 229 ~~-~~v~I~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~~elyD~Fs~~----~~~~~E~lGl~~~Ge~ 303 (388)
T PRK08142 229 KR-PLVKVLGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKYASIYDSFTIT----VLMQLEDLGFCKKGEG 303 (388)
T ss_pred CC-CCEEEEEEEEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCCEEEEeccchHH----HHHHHHHcCCCCCCch
Confidence 74 458999999887765444455444566789999999999999999999999766655 66666555 33221
Q ss_pred ----------C-CCCcceecccCCc--CCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCc
Q 018323 270 ----------T-SGSLAFSSTKGAI--GHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPIS 336 (358)
Q Consensus 270 ----------~-~~~~~v~~~k~~~--Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (358)
. ++.+|+|...+.+ ||+.+|+|+.+++++++||+...-+ ..+..+.+
T Consensus 304 ~~~v~~g~~~~~~G~lPvN~sGG~l~~G~p~gatG~~~~~E~~~QLrG~ag~--------------------~rQV~~a~ 363 (388)
T PRK08142 304 GKFVADGNLISGVGKLPFNTDGGGLCNNHPANRGGMTKVIEAVRQLRGEAHP--------------------AVQVPNCD 363 (388)
T ss_pred HHHHHCCCcccCCCCccccCCChhhcCCCcCcccHHHHHHHHHHHHcCCCCC--------------------CCCCCCCc
Confidence 1 2678999999954 8999999999999999999874210 11233468
Q ss_pred EEEeecccc-c---cceeeeEeee
Q 018323 337 AALSNSFGF-G---GTNASLLFTK 356 (358)
Q Consensus 337 ~~l~~~~g~-g---G~~~~~il~~ 356 (358)
++|+++.|- . +.++.+||++
T Consensus 364 ~gl~~~~Gg~~~~~~~~~~~vl~~ 387 (388)
T PRK08142 364 LALAHGTGGLLGSRHGSATLILER 387 (388)
T ss_pred EEEEeCCCCCCcCCCceEEEEEec
Confidence 899988773 2 2335666654
|
|
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=218.77 Aligned_cols=269 Identities=22% Similarity=0.242 Sum_probs=188.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+|+|+++++|| .|++|+..... .+ ..++..++..+|
T Consensus 26 ~~eLa~~A~~~aL~~agl~~~dID-----~vi~g~~~~~~-----------------------~~---~~~~~~~~~~~G 74 (393)
T PRK08235 26 ATELGGIAIKEALERANVSAEDVE-----EVIMGTVLQGG-----------------------QG---QIPSRQAARAAG 74 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecccCC-----------------------CC---CCHHHHHHHHcC
Confidence 478999999999999999999998 89999764210 00 122335678899
Q ss_pred CC--CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHH-------------HHh-----h-------
Q 018323 94 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA-------------GFC-----K------- 146 (358)
Q Consensus 94 l~--gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~-------------~~~-----~------- 146 (358)
+. -|+++|+.+|+|++.|+..|+++|++|.+|++||+|+|.++..+... .+. .
T Consensus 75 l~~~~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (393)
T PRK08235 75 IPWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSG 154 (393)
T ss_pred CCCCcceeehhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccCC
Confidence 95 38999999999999999999999999999999999999876532100 000 0
Q ss_pred --h----cccccccCC--------------------------------------------CCCCCCCC------------
Q 018323 147 --S----RALTTKYNG--------------------------------------------TPQEASRP------------ 164 (358)
Q Consensus 147 --~----~~l~~~~~~--------------------------------------------~~~~~~~p------------ 164 (358)
+ ..+..+++. +|+...|+
T Consensus 155 ~~~~~~A~~~~~~ygitre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~ 234 (393)
T PRK08235 155 VHMGVYGGEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDPIVVAKDEAPRKDTTIEKLAKLKP 234 (393)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCCCCCceEeCCCCCCCCCCCHHHHhcCCC
Confidence 0 000000100 12222211
Q ss_pred -CcC-----CCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 018323 165 -FDC-----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSH 238 (358)
Q Consensus 165 -f~~-----~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~ 238 (358)
|+. ..+.-.++|||+++||++++.|++++.+++++|.|++....... ........+++++|+++||+++
T Consensus 235 v~~p~g~lt~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~agl~~~ 309 (393)
T PRK08235 235 VFDKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAK-----DFPRTPGYAINALLEKTGKTVE 309 (393)
T ss_pred cccCCCcEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccChh-----hhcchHHHHHHHHHHHhCCCHH
Confidence 110 01222269999999999999999999999999999776543111 1122345799999999999999
Q ss_pred CccEEEecCCCCCCCcHHHHHHHHHHhhcccCC-CCcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCC
Q 018323 239 QVDYVNAHATSTPLGDTVEATAIRTVFSDHATS-GSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAK 315 (358)
Q Consensus 239 did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~-~~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~ 315 (358)
|||++|+| |.++...+...+..+ .+.|++...+ .+||+.+|+|+..++++++||+.+
T Consensus 310 did~~e~~----------d~f~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~~~---------- 369 (393)
T PRK08235 310 DIDLFEIN----------EAFAAVALASTEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLIHELKRR---------- 369 (393)
T ss_pred HCCeehhc----------chhHHHHHHHHHHhCCCcccCCcCCchHHhCCcHHHHHHHHHHHHHHHHHhc----------
Confidence 99999999 655544443322211 1135555555 779999999999999999999752
Q ss_pred CCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 316 PDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
..++.+...+.-||...++||++
T Consensus 370 ------------------~~~~g~~~~c~~gG~g~a~~~e~ 392 (393)
T PRK08235 370 ------------------GGGIGIAAICSGGGQGDAVLIEV 392 (393)
T ss_pred ------------------CCCeEEEEEcccccceEEEEEEe
Confidence 13457777788889999999986
|
|
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-25 Score=213.73 Aligned_cols=289 Identities=16% Similarity=0.179 Sum_probs=190.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCC--CCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHH-
Q 018323 13 RFIAYALCAADEALHDAKWLPSD--QGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVS- 89 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~--~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia- 89 (358)
+...|+.+|+++||+|+|+++++ || ++++|+..+... .. ...++..++
T Consensus 47 s~~eL~~~a~~~al~~agl~~~d~~ID-----~vi~G~~~~~~~----------------------~~--~~~~a~~~~~ 97 (438)
T PTZ00455 47 TLEELLATAIQGTLENTGLDGKAALVD-----KVVVGNFLGELF----------------------SS--QGHLGPAAVG 97 (438)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCcC-----EEEEEecccccc----------------------cc--ccchHHHHHH
Confidence 34789999999999999999988 98 889887532110 00 011122233
Q ss_pred ------HHcCCCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHH---------------------
Q 018323 90 ------MKYGFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM--------------------- 141 (358)
Q Consensus 90 ------~~lgl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~--------------------- 141 (358)
..+|+.+ |.++|+.+|+||+.|+..|+++|++|.+|+|||+|+|+++.....
T Consensus 98 ~~gl~~~~~gl~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (438)
T PTZ00455 98 SLGQSGASNALLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAADYRRQRKLDDF 177 (438)
T ss_pred hccCcccccccCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhhccchhhccccccccCc
Confidence 4556665 999999999999999999999999999999999999976442100
Q ss_pred --H-HHhh-hcccccccCC------------------CCCCC--CCCCc------------------------CCCCcee
Q 018323 142 --A-GFCK-SRALTTKYNG------------------TPQEA--SRPFD------------------------CGRDGFV 173 (358)
Q Consensus 142 --~-~~~~-~~~l~~~~~~------------------~~~~~--~~pf~------------------------~~~~g~~ 173 (358)
. .|.. .+.+...+.. +|... .+|.. ...+...
T Consensus 178 ~~~~~~a~~~~ym~~~ggitrE~la~vAvka~~~a~~nP~A~~~~~~~t~~~~~d~~~~~~e~l~s~~i~~pl~~~d~s~ 257 (438)
T PTZ00455 178 TFPCLFAKRMKYIQEHGHFTMEDTARVAAKAYANGNKNPLAHMHTRKLSLEFCTGASDKNPKFLGNETYKPFLRMTDCSQ 257 (438)
T ss_pred chHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHhcCCHhhccCCCCCceeeccccccchhhhcCCcccCcCchhcCCC
Confidence 0 0100 0111111000 12111 01111 0122233
Q ss_pred eecceEEEEeccHHHHHhcCCee----eEEEEeeeeecCCCCCCCC--CCChHHHHHHHHHHHHHcCCCCCCccEEEecC
Q 018323 174 IGEGSGVLVLEELEHAKKRGAKI----YAEVRGYGMSGDAHHITQP--HIDGKGAILAMTRALKQSGLQSHQVDYVNAHA 247 (358)
Q Consensus 174 ~geGaaa~vL~~~~~A~~~g~~~----~a~i~g~~~~~~~~~~~~~--~~~~~~~~~~~~~al~~agl~~~did~i~~h~ 247 (358)
++|||+|+||.+++.|++.+.+| .++|+|++..++......+ ..... ...+++++|+++|++++|||++|+|.
T Consensus 258 ~sDGAaA~vl~See~A~~l~~~p~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~-~~~A~~~a~~~AGl~~~DiD~~Ei~d 336 (438)
T PTZ00455 258 VSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDATRMFT-SRAAAQKALSMAGVKPSDLQVAEVHD 336 (438)
T ss_pred ccccceEEEEecHHHHHhcCCCCCCCccEEEEEEEEecCCcccCccccccchH-HHHHHHHHHHHcCCCHHHCcEeeecc
Confidence 79999999999999999998776 6899999987653221111 21222 36799999999999999999999993
Q ss_pred CCCCCCcHHHHHHHHHH-hhccc------------CCCCcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCC
Q 018323 248 TSTPLGDTVEATAIRTV-FSDHA------------TSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLN 312 (358)
Q Consensus 248 ~gt~~~d~~E~~a~~~~-~~~~~------------~~~~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~ 312 (358)
..+.. |...++.+ |+.+. .+++.|+|...+ .+|||.+|+|+..++++++||+..--
T Consensus 337 aFa~~----~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GHP~gAtG~~~v~e~~~QLrg~ag----- 407 (438)
T PTZ00455 337 CFTIA----ELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTGGGLLSFGHPVGATGVKQIMEVYRQMKGQCG----- 407 (438)
T ss_pred cChHH----HHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCCCchhhcCCCcchHHHHHHHHHHHHHhhccc-----
Confidence 33222 33333332 12111 134589999999 56999999999999999999986321
Q ss_pred CCCCCCCCCCCCCccccCCCCC-CcEEEeeccc-cccceeeeEeee
Q 018323 313 LAKPDPIFNDNFMPLTASKDMP-ISAALSNSFG-FGGTNASLLFTK 356 (358)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~g-~gG~~~~~il~~ 356 (358)
..+-.+ .+.+++++.| +++.+.+.||+.
T Consensus 408 ----------------~~Qv~~~~~~gl~~~~Gg~~~~~~~~vl~~ 437 (438)
T PTZ00455 408 ----------------EYQMKNIPALGATLNMGGDDKTAVSTVLQN 437 (438)
T ss_pred ----------------cCCCCCcccEEEEeccCCCcceEEEEEEec
Confidence 112223 4788888877 666677777753
|
|
| >PRK06289 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-25 Score=213.69 Aligned_cols=290 Identities=18% Similarity=0.193 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
+...|+.+|+++||+|||+++++|| ++++++..+.... . ...+ ...+. ....
T Consensus 25 s~~eLa~eA~~~AL~dAgl~~~dID-----~vi~g~~~~~~~~----------------~----~~~~-~~~~~--~~~~ 76 (403)
T PRK06289 25 DFADLTREVVDGTLAAAGVDADDIE-----VVHVGNFFGELFA----------------G----QGHL-GAMPA--TVHP 76 (403)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccccccc----------------c----cccc-chHHH--HHhh
Confidence 3588999999999999999999998 8998875432100 0 0000 01111 1223
Q ss_pred CCCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHH---HH------hh------------hcc-
Q 018323 93 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA---GF------CK------------SRA- 149 (358)
Q Consensus 93 gl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~---~~------~~------------~~~- 149 (358)
++.| |+++++++|+|++.||..|+.+|++|++|+|||+|+|++...+... .+ .. ...
T Consensus 77 ~~~g~~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 156 (403)
T PRK06289 77 ALWGVPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARV 156 (403)
T ss_pred cCCCCceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHH
Confidence 4444 8999999999999999999999999999999999999754332110 00 00 000
Q ss_pred ---cccccC------------------CCCCCCCC------CCc--------------CCCCceeeecceEEEEeccHHH
Q 018323 150 ---LTTKYN------------------GTPQEASR------PFD--------------CGRDGFVIGEGSGVLVLEELEH 188 (358)
Q Consensus 150 ---l~~~~~------------------~~~~~~~~------pf~--------------~~~~g~~~geGaaa~vL~~~~~ 188 (358)
..++++ .+|....+ |.. ...+...++|||+++||.+++.
T Consensus 157 a~~y~~~yG~t~e~la~va~~~~~~A~~NP~A~~~~~~~~~~~~~~d~~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~ 236 (403)
T PRK06289 157 ADEYDRRYGLDEEHLRAIAEINFANARRNPNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAY 236 (403)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHccCcHhhcCccccccccchhhhhcCCcccCCCchhhcCCCCCceeEEEEEcHHH
Confidence 000000 01111111 100 0112223789999999999999
Q ss_pred HHhcCC-eeeEEEEeeeeecCCCCCCC------CCC-ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHH
Q 018323 189 AKKRGA-KIYAEVRGYGMSGDAHHITQ------PHI-DGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATA 260 (358)
Q Consensus 189 A~~~g~-~~~a~i~g~~~~~~~~~~~~------~~~-~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a 260 (358)
|++.+. ++.++|+|++..++...... .++ .......+++++|+++||+++|||++|+|...+.. |...
T Consensus 237 a~~l~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~Agi~~~Didv~el~D~fa~~----~l~~ 312 (403)
T PRK06289 237 LRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVLPHVRQAVLDAYRRAGVGLDDLDGFEVHDCFTPS----EYLA 312 (403)
T ss_pred HHHhccCCCCEEEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCeEEeeeccchHH----HHHH
Confidence 998876 56689999988755332111 111 22335679999999999999999999999555444 5555
Q ss_pred HHHH-hhccc------------CCCCcceecccCC--cCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCC
Q 018323 261 IRTV-FSDHA------------TSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFM 325 (358)
Q Consensus 261 ~~~~-~~~~~------------~~~~~~v~~~k~~--~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~ 325 (358)
++.+ |+.+. .++++|+|...+. .||+.+++|+.+++++++||+...
T Consensus 313 le~lGl~~~Ge~~~~v~~G~~~~~G~lpvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~a------------------- 373 (403)
T PRK06289 313 IDHIGLTGPGESWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDAAKQVTGTA------------------- 373 (403)
T ss_pred HHHcCCCCCCcHHHHHhcCCcccCCCeeEcCCCCccccCCCccchHHHHHHHHHHHHhccc-------------------
Confidence 5444 23221 1467899999995 599999999999999999999742
Q ss_pred ccccCCCCCCcEEEeeccc-cccceeeeEee
Q 018323 326 PLTASKDMPISAALSNSFG-FGGTNASLLFT 355 (358)
Q Consensus 326 ~~~~~~~~~~~~~l~~~~g-~gG~~~~~il~ 355 (358)
...+....+.+++.+.| .+|++.++||+
T Consensus 374 --g~~Qv~~~~~~l~~~~gg~~~~~~~~i~~ 402 (403)
T PRK06289 374 --GDYQVEGAKTFGTLNIGGSTTTTVSFVVG 402 (403)
T ss_pred --cCccCCchheEEEEecCcccceEEEEEEe
Confidence 11122334567777777 45556666654
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-26 Score=217.81 Aligned_cols=271 Identities=22% Similarity=0.298 Sum_probs=195.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
+...|+.+|+++||+|+|+++++|| +|++|+..... . ....+..++..+
T Consensus 26 ~~~~L~~~A~~~Al~dAgl~~~dID-----~vi~g~~~~~~------------------------~--~~~~a~~v~~~l 74 (426)
T PRK08170 26 SASDLAVAAGRALLNRQPFAPDDLD-----EVILGCAMPSP------------------------D--EANIARVVALRL 74 (426)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCCC------------------------C--cChHHHHHHHHh
Confidence 3588999999999999999999998 99998653110 0 013455688899
Q ss_pred CCC--CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHH--------H---------------------
Q 018323 93 GFQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS--------M--------------------- 141 (358)
Q Consensus 93 gl~--gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~--------~--------------------- 141 (358)
|+. .|.++++.+|+|++.++..|+++|++|.+|++||+|+|+++..+. .
T Consensus 75 Gl~~~~p~~~v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (426)
T PRK08170 75 GCGEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLR 154 (426)
T ss_pred CcCCCceeeeccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCcccccccccc
Confidence 995 399999999999999999999999999999999999997543110 0
Q ss_pred HHHh-----------------hhcc----cccccCC------------------------------------CCC---C-
Q 018323 142 AGFC-----------------KSRA----LTTKYNG------------------------------------TPQ---E- 160 (358)
Q Consensus 142 ~~~~-----------------~~~~----l~~~~~~------------------------------------~~~---~- 160 (358)
..+. .... ..+.++. +|. +
T Consensus 155 ~~~~~~~~~~~~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~~i~pv~~~~~np~a~de~ 234 (426)
T PRK08170 155 PSYLAPVIGLLRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLKEVVPLFDRDGKFYDHDDG 234 (426)
T ss_pred ccccccccccCccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcceEeeeecCCCCeeccCCC
Confidence 0000 0000 0000000 000 0
Q ss_pred -----------CCCC-CcCC------CCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHH
Q 018323 161 -----------ASRP-FDCG------RDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGA 222 (358)
Q Consensus 161 -----------~~~p-f~~~------~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~ 222 (358)
..+| |+.. .+.-.++|||+|+||++++.|++++.++.++|.++..... .|.....+.
T Consensus 235 ~r~~~t~e~~~~~~~v~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~-----~~~~~~~~~ 309 (426)
T PRK08170 235 VRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAAL-----DPSQMGLGP 309 (426)
T ss_pred CCCCCCHHHHhcCCCcccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeee-----CchhhcccH
Confidence 0111 1101 2233479999999999999999999888889998877653 222233345
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcc----------cC--------CCCcceecccC--C
Q 018323 223 ILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDH----------AT--------SGSLAFSSTKG--A 282 (358)
Q Consensus 223 ~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~----------~~--------~~~~~v~~~k~--~ 282 (358)
..+++++|+++||+++|||++|+| |.+++..+.... .. -...|||...+ .
T Consensus 310 ~~a~~~al~~aGl~~~did~~ei~----------daFa~~~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~GG~la 379 (426)
T PRK08170 310 VHAATPLLQRHGLTLEDLDLWEIN----------EAFAAQVLACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAIA 379 (426)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEec----------chhHHHHHHHHHHhccccchhcccccccccCCCCcceecCCCCHHH
Confidence 689999999999999999999999 777766553221 00 12358898888 4
Q ss_pred cCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 283 IGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 283 ~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
+||+.||||+.++..++.+|++ .+.++++++...-||...++||++.
T Consensus 380 ~GHP~GAtG~~~~~~l~~~l~~----------------------------~~~~~g~~~~c~~gg~g~a~~~e~~ 426 (426)
T PRK08170 380 LGHPVGASGARIVLHLLHALKR----------------------------RGTKRGIAAICIGGGQGGAMLLERV 426 (426)
T ss_pred hCCCccCccHHHHHHHHHHHHh----------------------------hCCCeEEEEEecCCChhheEEEEeC
Confidence 5999999999999999999975 1246899999999999999999873
|
|
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=214.06 Aligned_cols=276 Identities=19% Similarity=0.259 Sum_probs=193.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+++++||+|+|+++++|| .|++|+..... . ...++..++..+|
T Consensus 29 ~~eL~~~a~~~al~~agl~~~~ID-----~vi~G~~~~~~-----------------------~---~~~~ar~~a~~aG 77 (428)
T PRK08963 29 AVDLGKMVVGELLARSEIDPELIE-----QLVFGQVVQMP-----------------------E---APNIAREIVLGTG 77 (428)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEeccCCCC-----------------------C---ccHHHHHHHHHCC
Confidence 378999999999999999999898 89999753110 0 0223556888999
Q ss_pred CC-C-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHH-H--------------Hh-------h---
Q 018323 94 FQ-G-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA-G--------------FC-------K--- 146 (358)
Q Consensus 94 l~-g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~-~--------------~~-------~--- 146 (358)
+. + |.++|+.+|+||+.|+..|++.|++|++|++||+|+|+++..+... . +. .
T Consensus 78 l~~~~P~~tV~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (428)
T PRK08963 78 MNVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRL 157 (428)
T ss_pred CCCCCcceeehhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccch
Confidence 97 4 9999999999999999999999999999999999999876432100 0 00 0
Q ss_pred ----------------------hcccccccCCC----------------------------------CCC-------CCC
Q 018323 147 ----------------------SRALTTKYNGT----------------------------------PQE-------ASR 163 (358)
Q Consensus 147 ----------------------~~~l~~~~~~~----------------------------------~~~-------~~~ 163 (358)
......+++.+ |.. ..|
T Consensus 158 ~~~~~~~~~~~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~~p~a~~~~~D~~~r 237 (428)
T PRK08963 158 RDLLPVPPAVAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYKQPLEEDNNIR 237 (428)
T ss_pred hhccccCcccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEecCCceeeCCCCCCC
Confidence 00000011000 100 011
Q ss_pred ------------C-CcC------CCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHH
Q 018323 164 ------------P-FDC------GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAIL 224 (358)
Q Consensus 164 ------------p-f~~------~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~ 224 (358)
| |+. ..+...++|||+++||++++.|++++.++.++|.+++...... .++ .......
T Consensus 238 ~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~~~---~~~-~~~~~~~ 313 (428)
T PRK08963 238 GDSTLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDV---WQD-MLLGPAY 313 (428)
T ss_pred CCCCHHHHhcCCccccCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEEEEecccCCc---hhh-hhhHHHH
Confidence 0 100 0112226999999999999999999999999999988764211 011 1234457
Q ss_pred HHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHH----h-----hcccCCCCc---ceecccC--CcCCcccch
Q 018323 225 AMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV----F-----SDHATSGSL---AFSSTKG--AIGHLLGAA 290 (358)
Q Consensus 225 ~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~----~-----~~~~~~~~~---~v~~~k~--~~Gh~~~as 290 (358)
+++++|+++|++++|||++|+|...+.. |...++.+ | +....++.+ |+|...+ .+||+.+++
T Consensus 314 a~~~al~~AGl~~~DiD~~Ei~d~Fa~~----~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gas 389 (428)
T PRK08963 314 ATPLALERAGLTLADLTLIDMHEAFAAQ----TLANLQMFASERFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAAT 389 (428)
T ss_pred HHHHHHHHcCCCHHHCCEEEEccccHHH----HHHHHHHhcCchhhhhcccccccCCCCCCCccCCCCCHHhcCCCcccc
Confidence 8999999999999999999999333221 22222222 0 111112345 8999988 459999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 291 GAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 291 G~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
|+..++++++||+.+ ..+++|++.++-||...++||++
T Consensus 390 G~~~~~e~~~qLrg~----------------------------~g~~gl~~~c~ggG~g~a~~ie~ 427 (428)
T PRK08963 390 GARMITQTLHELRRR----------------------------GGGLGLTTACAAGGLGAAMVLEV 427 (428)
T ss_pred HHHHHHHHHHHHhhc----------------------------CCCEEEEEEccccChhhEEEEEe
Confidence 999999999999862 13579999999999999999986
|
|
| >PRK06445 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.9e-26 Score=215.70 Aligned_cols=272 Identities=21% Similarity=0.275 Sum_probs=190.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+|+|++++++| .+++|+....... + ........+...++
T Consensus 32 ~~~L~~~a~~~AL~~agl~~~dID-----~vi~g~~~~~~~~-----------------~------~~~~~~~~l~a~~~ 83 (394)
T PRK06445 32 PEELAAMLINRLIEKTGIKPEEID-----DIITGCALQVGEN-----------------W------LYGGRHPIFLARLP 83 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----eeEEEeecCCCcc-----------------c------ccHHHHHHHHcCCC
Confidence 478999999999999999999998 8999876532100 0 00011112333344
Q ss_pred CCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHH-----------HH-H-----Hhh-----hc---
Q 018323 94 FQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS-----------MA-G-----FCK-----SR--- 148 (358)
Q Consensus 94 l~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~-----------~~-~-----~~~-----~~--- 148 (358)
.+-|+++|+.+|+|++.|+..|+++|++|.+|++||+|+|++...+. .. . +.. ..
T Consensus 84 ~~~p~~~V~~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a 163 (394)
T PRK06445 84 YNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLTA 163 (394)
T ss_pred CCCcchhhhhhhHHHHHHHHHHHHHHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCcccccCCCCHHHHH
Confidence 44599999999999999999999999999999999999996542210 00 0 000 00
Q ss_pred -ccccccCC-------------------------------------------CCCCCCC------------C-CcC----
Q 018323 149 -ALTTKYNG-------------------------------------------TPQEASR------------P-FDC---- 167 (358)
Q Consensus 149 -~l~~~~~~-------------------------------------------~~~~~~~------------p-f~~---- 167 (358)
...++|+. +|+...| | |+.
T Consensus 164 ~~~~~~ygitre~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~npda~~r~~~t~e~~~~~~~v~~~~g~l 243 (394)
T PRK06445 164 EKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQSVRPDTSLEKLAKLPPAFKPDGVI 243 (394)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEecCCCCceeeCCCCCCCCCCCHHHHhcCCCccCCCCcE
Confidence 00000100 1111111 1 110
Q ss_pred -CCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEec
Q 018323 168 -GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAH 246 (358)
Q Consensus 168 -~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h 246 (358)
..+...++|||+++||++++.|++++.+++++|+|++...+ .|.....+...+++++|+++|++++|||++|+|
T Consensus 244 t~~~~~~~~DGAaavvl~s~~~A~~~~~~~~a~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~Agl~~~dId~~e~~ 318 (394)
T PRK06445 244 TAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGV-----PPAIMGKGPVPASKKALEKAGLSVKDIDLWEIN 318 (394)
T ss_pred ecCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecc-----CCchhcchHHHHHHHHHHHcCCCHHHcCEEEec
Confidence 11133379999999999999999999999999999998764 233334467789999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHHHHhhcccCC-CCcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCC
Q 018323 247 ATSTPLGDTVEATAIRTVFSDHATS-GSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDN 323 (358)
Q Consensus 247 ~~gt~~~d~~E~~a~~~~~~~~~~~-~~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~ 323 (358)
|.+++..+...+..+ .+.|+|...+ .+||+.+|+|+.+++++++||+.
T Consensus 319 ----------d~f~~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~------------------- 369 (394)
T PRK06445 319 ----------EAFAVVVLYAIKELGLDPETVNIKGGAIAIGHPLGATGARIVGTLARQLQI------------------- 369 (394)
T ss_pred ----------ccchHHHHHHHHHhCCCccccCCCCCHHHcCCCccchHHHHHHHHHHHHHh-------------------
Confidence 444444443222211 1136777777 56999999999999999999971
Q ss_pred CCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 324 FMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 324 ~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
.+.+++|++..+-||...++||++
T Consensus 370 ---------~~~~~gl~~~~~~gg~g~a~~~e~ 393 (394)
T PRK06445 370 ---------KGKDYGVATLCVGGGQGGAVVLER 393 (394)
T ss_pred ---------cCCCEEEEEEcccCChhhEEEEEc
Confidence 124689999999999999999986
|
|
| >PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.9e-26 Score=212.58 Aligned_cols=274 Identities=20% Similarity=0.247 Sum_probs=193.2
Q ss_pred cCCHHHHHHHHHHHHHHH-HCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHH
Q 018323 10 SIARFIAYALCAADEALH-DAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHV 88 (358)
Q Consensus 10 ~~~~~~~l~~~aa~~Al~-dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i 88 (358)
.+++ ..|+.+++++||+ ++|++++++| .+++|+..... .. ...++..+
T Consensus 24 ~~~~-~~L~~~~~~~al~~~agl~~~~Id-----~vi~g~~~~~~-----------------------~~--g~~~ar~~ 72 (387)
T PRK08947 24 NVRA-EDLSAHLMRSLLARNPALDPAEID-----DIIWGCVQQTL-----------------------EQ--GFNIARNA 72 (387)
T ss_pred CCCH-HHHHHHHHHHHHHhccCcChHHhC-----eEEEEeccccc-----------------------cc--cccHHHHH
Confidence 3444 7889999999999 4899999898 89998643110 00 01234457
Q ss_pred HHHcCCCC--CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHH---------HH--------Hh-hhc
Q 018323 89 SMKYGFQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM---------AG--------FC-KSR 148 (358)
Q Consensus 89 a~~lgl~g--p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~---------~~--------~~-~~~ 148 (358)
+...|+.. |.++|+++|+||+.|+..|++.|++|++|++||+|+|+++..... .. +. ...
T Consensus 73 ~~~~Gl~~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 152 (387)
T PRK08947 73 ALLAGIPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHGVDFHPGLSKNVAKAAGMMGLTAE 152 (387)
T ss_pred HHHcCCCCCCcceeeechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCccccccCcchhhhhhccccchHHHHHHH
Confidence 78889873 789999999999999999999999999999999999987543210 00 00 000
Q ss_pred ccccccCC--------------------------------------------CCCCCC------------CC-CcC----
Q 018323 149 ALTTKYNG--------------------------------------------TPQEAS------------RP-FDC---- 167 (358)
Q Consensus 149 ~l~~~~~~--------------------------------------------~~~~~~------------~p-f~~---- 167 (358)
....+|+. +++... +| |+.
T Consensus 153 ~~~~~ygisre~~~~~avksh~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~ 232 (387)
T PRK08947 153 MLGKMHGISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVLKLFDYDEVIRPETTVEALAALRPAFDPVNGT 232 (387)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeeeecCCCCCceeecCCCCCcCCCCHHHHhcCCceeeCCCCc
Confidence 00000000 012111 11 111
Q ss_pred --CCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEe
Q 018323 168 --GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNA 245 (358)
Q Consensus 168 --~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~ 245 (358)
..+...++|||+++||++++.|++++.+++++|+|++.+....+ ........+++++|+++|++|+|||++|+
T Consensus 233 lt~~~~~~~sDGAaAvvl~s~~~A~~~g~~p~~~I~g~~~~~~~~~-----~~~~~~~~a~~~al~~Agl~~~DId~~El 307 (387)
T PRK08947 233 VTAGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPS-----IMGYGPVPATQKALKRAGLSISDIDVFEL 307 (387)
T ss_pred EEccccCCcCCceEEEEEccHHHHHHCCCCccEEEEEEEEcCcCcc-----cccccHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 12233479999999999999999999899999999998743211 11223467889999999999999999999
Q ss_pred cCCCCCCCcHHHHHHHHHHhhcccCC----CCcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Q 018323 246 HATSTPLGDTVEATAIRTVFSDHATS----GSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 319 (358)
Q Consensus 246 h~~gt~~~d~~E~~a~~~~~~~~~~~----~~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~ 319 (358)
| |.+++..+...+..+ ...|+|...+ .+|||.+|+|+..+++++++|+.
T Consensus 308 ~----------d~F~~~~l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~L~~--------------- 362 (387)
T PRK08947 308 N----------EAFAAQSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMER--------------- 362 (387)
T ss_pred c----------ccchHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh---------------
Confidence 9 666555554332221 1247887777 56999999999999999999975
Q ss_pred CCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 320 FNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
.+.++++.++++-+|....+||+++
T Consensus 363 -------------~~~~~gl~~~~~g~G~g~a~~~e~~ 387 (387)
T PRK08947 363 -------------KDAQFGLATMCIGLGQGIATVFERV 387 (387)
T ss_pred -------------cCCCEEEEEEeecccceeEEEEEeC
Confidence 1247899999998888888888863
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.7e-26 Score=213.15 Aligned_cols=271 Identities=23% Similarity=0.304 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+++++||+|||++++++| +|++|+..... .+ ...+..++..+|
T Consensus 25 ~~~L~~~a~~~al~dAgl~~~~ID-----~vv~g~~~~~~-----------------------~~---~~~~~~~~~~~G 73 (394)
T PLN02644 25 ATELGSIAIQAALERAGVDPALVQ-----EVFFGNVLSAN-----------------------LG---QAPARQAALGAG 73 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCcCC-----------------------cC---CcHHHHHHHhcC
Confidence 478999999999999999999998 89988643100 00 012345778889
Q ss_pred CCC--CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHH---------------H------H--------
Q 018323 94 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS---------------M------A-------- 142 (358)
Q Consensus 94 l~g--p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~---------------~------~-------- 142 (358)
+.. |..+|+.+|+|++.++..|+++|++|++|++||+|+|+++..+. . .
T Consensus 74 l~~~~p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (394)
T PLN02644 74 LPPSTICTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYND 153 (394)
T ss_pred CCCCCceEEEeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCC
Confidence 863 78899999999999999999999999999999999887642110 0 0
Q ss_pred -HHh-hhcccccccC--------------------CCC-------------------------CCC-----CCCC-----
Q 018323 143 -GFC-KSRALTTKYN--------------------GTP-------------------------QEA-----SRPF----- 165 (358)
Q Consensus 143 -~~~-~~~~l~~~~~--------------------~~~-------------------------~~~-----~~pf----- 165 (358)
.+. ......+.++ ..+ ++. ..|+
T Consensus 154 ~~~~~~A~~~~~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~~~~~~~~~~~de~~~~~~~~~l~~l~p 233 (394)
T PLN02644 154 FGMGVCAELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRP 233 (394)
T ss_pred CcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccCCCCCceEeecCCCcCCCCHHHHhCCCC
Confidence 000 0000000000 000 000 0000
Q ss_pred --c------CCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 018323 166 --D------CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQS 237 (358)
Q Consensus 166 --~------~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~ 237 (358)
+ ...+.-.++||++++||++++.|++++.+++++|+|++...+.. .........+++++|+++|++|
T Consensus 234 ~f~~~~g~vt~~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~-----~~~~~~~~~a~~~al~~Agi~~ 308 (394)
T PLN02644 234 SFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAP-----ELFTTAPALAIPKALKHAGLEA 308 (394)
T ss_pred cccCCCCcEeccccCCCCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCC-----cccchhHHHHHHHHHHHcCCCH
Confidence 0 00123446999999999999999999999999999998776521 1112233569999999999999
Q ss_pred CCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCC-CcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCC
Q 018323 238 HQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSG-SLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLA 314 (358)
Q Consensus 238 ~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~-~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~ 314 (358)
+|||++|+| |.+++..+...+..+. ..|++...+ .+||+.+|+|+.++++++++|+..
T Consensus 309 ~Did~~Ei~----------d~f~~~~l~~~e~lg~~~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~~~--------- 369 (394)
T PLN02644 309 SQVDYYEIN----------EAFSVVALANQKLLGLDPEKVNVHGGAVSLGHPIGCSGARILVTLLGVLRSK--------- 369 (394)
T ss_pred HHCCEEEeC----------cHHHHHHHHHHHHhCCCccccCCCCChHhhCCCHHHHHHHHHHHHHHHHHhc---------
Confidence 999999999 5555544433222211 135665555 679999999999999999999762
Q ss_pred CCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 315 KPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
..++.+...++-||...++||++.+
T Consensus 370 -------------------~~~~g~~~~~~~gg~g~a~~~e~~~ 394 (394)
T PLN02644 370 -------------------NGKYGVAGICNGGGGASAIVVELMQ 394 (394)
T ss_pred -------------------CCCeEEEEEeccCCceeEEEEEecC
Confidence 1357888888889999999999754
|
|
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-25 Score=208.66 Aligned_cols=282 Identities=19% Similarity=0.202 Sum_probs=186.7
Q ss_pred HHHHHHHHHHHHHHHHCC-CCC-CCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHH
Q 018323 13 RFIAYALCAADEALHDAK-WLP-SDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM 90 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG-~~~-~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 90 (358)
....|+.+|+++||+||| +++ ++|| ++++++.. .+ .... .....++.
T Consensus 24 s~~eL~~eA~~~Al~DAG~l~~~~dId-----~~~~~~~~-~~------------------~~~~-------~~~~~~~~ 72 (385)
T PRK06066 24 SFREMMFEAASRAYKDAGNINPRRDVD-----SFISCQED-FW------------------EGIA-------IADEFAPD 72 (385)
T ss_pred CHHHHHHHHHHHHHHhcCCCCChhcCC-----EEEEecCc-cc------------------Cccc-------ccchhHHH
Confidence 358899999999999999 986 6888 88875421 00 0000 01123567
Q ss_pred HcCCC-CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHH------------------------Hh
Q 018323 91 KYGFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAG------------------------FC 145 (358)
Q Consensus 91 ~lgl~-gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~------------------------~~ 145 (358)
.+|+. .|.+.+ |+|+..++..|++.|++|.+|+|||++.|++........ +.
T Consensus 73 ~lg~~~~~~~~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~ 149 (385)
T PRK06066 73 QIGGAMRPTMTV---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLD 149 (385)
T ss_pred HcccCCCCeEEE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHH
Confidence 78885 487776 889999999999999999999999999986433110000 00
Q ss_pred hhcccccccC------------------CCCCCC-CCCCc--------------CCCCceeeecceEEEEeccHHHHHhc
Q 018323 146 KSRALTTKYN------------------GTPQEA-SRPFD--------------CGRDGFVIGEGSGVLVLEELEHAKKR 192 (358)
Q Consensus 146 ~~~~l~~~~~------------------~~~~~~-~~pf~--------------~~~~g~~~geGaaa~vL~~~~~A~~~ 192 (358)
..+.+ ++++ .+|... -+|.+ ...+...++|||+|+||.+++.|++.
T Consensus 150 a~rym-~~yG~t~E~lA~Vavk~r~nA~~NP~A~~r~~~t~edvl~S~~ia~Pl~~~d~~~~~DGAaAvvl~s~~~a~~l 228 (385)
T PRK06066 150 AVKFM-SRKGITREDLALVVEKNKKAGLSNPRASYASNISLEDVLSSEYVVYPLTELDIAPFVDGAIVVVLASEEVAKKL 228 (385)
T ss_pred HHHHH-HHHCcCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCchhhccCCCCCceEEEEEeCHHHHHhc
Confidence 00000 0000 001000 00000 01222238999999999999999998
Q ss_pred CCeeeEEEEeeeeecCCCCCCCCCC-ChHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCCCCcHHHHHHHHHH-hhcc
Q 018323 193 GAKIYAEVRGYGMSGDAHHITQPHI-DGKGAILAMTRALKQSGLQ--SHQVDYVNAHATSTPLGDTVEATAIRTV-FSDH 268 (358)
Q Consensus 193 g~~~~a~i~g~~~~~~~~~~~~~~~-~~~~~~~~~~~al~~agl~--~~did~i~~h~~gt~~~d~~E~~a~~~~-~~~~ 268 (358)
+.++. +|+|++...+.......+. .......+++++|+++||+ ++|||++|+|...+.. |...++.+ |+.+
T Consensus 229 ~~~pv-~I~g~g~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~D~Ft~~----~l~~~e~lG~~~~ 303 (385)
T PRK06066 229 TDDPV-WIKGIGWSTESSNLETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEVDDRYSYK----ELQHIEALRLSEE 303 (385)
T ss_pred CCCCE-EEEEEEEecCCcccccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEEecCChHH----HHHHHHHcCCCCC
Confidence 87774 9999988665322211111 1233347999999999998 6999999999555444 55544444 2222
Q ss_pred c------------CCCCcceecccCC--cCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCC
Q 018323 269 A------------TSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMP 334 (358)
Q Consensus 269 ~------------~~~~~~v~~~k~~--~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (358)
. .++++|+|...+. .||+.+++|+.+++++++||+.+. ...+ .+
T Consensus 304 Ge~~~~v~~G~~~~~G~~PvN~~GG~la~Ghp~gatG~~~v~e~~~QL~g~A---------------------g~rQ-~~ 361 (385)
T PRK06066 304 PEKDSLLREGNFDPQGELPVNPSGGHLAKGVPLEASGLSLLLDAVEYLRGEA---------------------GARQ-GK 361 (385)
T ss_pred CchHHHHHCCCCCCCCCccccCCCchhcCCCccchhHHHHHHHHHHHHcccc---------------------cccC-CC
Confidence 1 2467899999995 589999999999999999998743 1223 45
Q ss_pred CcEEEeeccc--cccceeeeEeee
Q 018323 335 ISAALSNSFG--FGGTNASLLFTK 356 (358)
Q Consensus 335 ~~~~l~~~~g--~gG~~~~~il~~ 356 (358)
.+++++.+.| +++..+.+||++
T Consensus 362 a~~~l~~~~gg~~~~~~~v~v~~~ 385 (385)
T PRK06066 362 AERAVVASWRGIPTLTGSVVVVER 385 (385)
T ss_pred CcEEEEcCCCccCCccEEEEEEeC
Confidence 6888888777 567777778774
|
|
| >TIGR02445 fadA fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-25 Score=210.57 Aligned_cols=271 Identities=21% Similarity=0.258 Sum_probs=190.7
Q ss_pred HHHHHHHHHHHHHHH-CCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 14 FIAYALCAADEALHD-AKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 14 ~~~l~~~aa~~Al~d-AG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
...|+.++.++||++ +|+++++|| .|++|+...... .+ ..++..++...
T Consensus 25 ~~~L~~~a~~~al~~~agl~~~~Id-----~v~~G~~~~~~~----------------------~g---~~~ar~~~~~~ 74 (385)
T TIGR02445 25 AEDLSAHLMSKLLARNPKVDPAEVE-----DIYWGCVQQTLE----------------------QG---FNIARNAALLA 74 (385)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHcC-----EEEEeccccccc----------------------cc---chHHHHHHHHC
Confidence 378999999999995 699999998 899997531100 00 12344455566
Q ss_pred CCCC--CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHH------HHHhh--------h----ccccc
Q 018323 93 GFQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM------AGFCK--------S----RALTT 152 (358)
Q Consensus 93 gl~g--p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~------~~~~~--------~----~~l~~ 152 (358)
|+.. |+++|+.+|+||+.|+..|++.|++|++|++|++|+|+++..+.. ..+.. + .....
T Consensus 75 g~~~~~p~~tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 154 (385)
T TIGR02445 75 QIPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHGVDFHPGMSLHVAKAAGMMGLTAEMLGK 154 (385)
T ss_pred CCCCCcchhhhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccCCCcchhHHhhhccccchHHHHHHHHHH
Confidence 7654 779999999999999999999999999999999999986533210 00000 0 00000
Q ss_pred ccC---------------------------C-----------------CCCCCCC------------C-CcC------CC
Q 018323 153 KYN---------------------------G-----------------TPQEASR------------P-FDC------GR 169 (358)
Q Consensus 153 ~~~---------------------------~-----------------~~~~~~~------------p-f~~------~~ 169 (358)
+++ . +|+...| | |+. ..
T Consensus 155 ~ygitre~~d~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~ 234 (385)
T TIGR02445 155 MHGISREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDADGFLKQFDYDEVIRPETTVESLAALRPAFDPKNGTVTAG 234 (385)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeeeccCCCCceeeCCCCCCCCCCCHHHHhcCCceecCCCCceecc
Confidence 000 0 0222222 1 111 12
Q ss_pred CceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 018323 170 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATS 249 (358)
Q Consensus 170 ~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~g 249 (358)
+...++||++++||++++.|++++.+++++|+|++..... |.........+++++|+++||+|+|||++|+|
T Consensus 235 ~~~~~sDGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~-----~~~~~~~~~~a~~~al~~AGi~p~DId~~Ei~--- 306 (385)
T TIGR02445 235 TSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCD-----PSIMGYGPVPATQKALKRAGLSISDIDVFELN--- 306 (385)
T ss_pred cCCCcCCceEEEEEecHHHHHHCCCCeeEEEEEEEEcCCC-----CcccchhHHHHHHHHHHHcCCCHHHcCEEEEc---
Confidence 2333799999999999999999999999999999886531 22222345688999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHhhcccCC----CCcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCC
Q 018323 250 TPLGDTVEATAIRTVFSDHATS----GSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDN 323 (358)
Q Consensus 250 t~~~d~~E~~a~~~~~~~~~~~----~~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~ 323 (358)
|.+++..+...+..+ +..|+|...+ .+|||.||||+..++.+++.|+.
T Consensus 307 -------daFa~~~l~~~e~lg~~~~g~~~vN~~GG~la~GhP~GATG~r~v~~l~~~l~~------------------- 360 (385)
T TIGR02445 307 -------EAFAAQALPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEQ------------------- 360 (385)
T ss_pred -------cccHHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh-------------------
Confidence 666666654433221 1268888888 46999999999988888854432
Q ss_pred CCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 324 FMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 324 ~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
.+.+++++++.+-||...++||+++
T Consensus 361 ---------~~~~~Gl~~~~~g~g~g~a~~~e~~ 385 (385)
T TIGR02445 361 ---------KDATFGLATMCIGLGQGIATVFERV 385 (385)
T ss_pred ---------cCCCeEEEEEecccChhheEEEEeC
Confidence 1246799999999999999999874
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli. |
| >PRK06504 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-25 Score=210.01 Aligned_cols=270 Identities=19% Similarity=0.191 Sum_probs=186.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcCC
Q 018323 15 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 94 (358)
Q Consensus 15 ~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 94 (358)
..|+.+++++||+|+|+++++|| .+++|+..... .....++..+...-||
T Consensus 27 ~~L~~~a~~~al~~a~l~~~~Id-----~vi~G~~~~~~-------------------------~~~~~~ar~~~l~~gl 76 (390)
T PRK06504 27 ADLAAQVLDALVDRSGADPALIE-----DVIMGCVSQVG-------------------------EQATNVARNAVLASKL 76 (390)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccccc-------------------------cccccHHHHHHHHcCC
Confidence 88999999999999999999998 89998754110 0000122222223355
Q ss_pred --CCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHH----------------Hhh----------
Q 018323 95 --QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAG----------------FCK---------- 146 (358)
Q Consensus 95 --~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~----------------~~~---------- 146 (358)
.-|.++|+.+|+||+.|+..|++.|++|++|++||+|+|+++..+.... +..
T Consensus 77 ~~~vP~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (390)
T PRK06504 77 PESVPGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQF 156 (390)
T ss_pred CCCCceEEEechhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCccccccccccccccccccccccccccCCCCCCHH
Confidence 3499999999999999999999999999999999999998764321000 000
Q ss_pred --hcccccccCCCC-----------------------CC---------------------------------CCCCCcC-
Q 018323 147 --SRALTTKYNGTP-----------------------QE---------------------------------ASRPFDC- 167 (358)
Q Consensus 147 --~~~l~~~~~~~~-----------------------~~---------------------------------~~~pf~~- 167 (358)
...+..+++.++ .+ ..+|...
T Consensus 157 ~aae~~a~~ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~~De~~r~~~t~e~l~~~~~~~~~ 236 (390)
T PRK06504 157 TGAEMMAKKYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHTVDEGIRFDATLEGIAGVKLIAEG 236 (390)
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCCCCCceEEccCCCCCCCCCHHHHhcCCCCCCC
Confidence 000011110000 00 1112210
Q ss_pred ----CCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEE
Q 018323 168 ----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYV 243 (358)
Q Consensus 168 ----~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i 243 (358)
..+.-.++|||+|+||.+++.|++.+.++.++|.++...... +.....+...+++++|+++|++++|||++
T Consensus 237 g~lt~~n~s~~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~-----~~~~~~~~~~a~~~a~~~agl~~~Did~~ 311 (390)
T PRK06504 237 GRLTAATASQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGD-----PVIMLEAPLPATERALKKAGMKIDDIDLY 311 (390)
T ss_pred CCCcCccCCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEeecC-----chhhhccHHHHHHHHHHHcCCCHHHCCEE
Confidence 012223789999999999999999998887788887765531 11123345678999999999999999999
Q ss_pred EecCCCCCCCcHHHHHHHHHHhhcccCC-CCcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Q 018323 244 NAHATSTPLGDTVEATAIRTVFSDHATS-GSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF 320 (358)
Q Consensus 244 ~~h~~gt~~~d~~E~~a~~~~~~~~~~~-~~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~ 320 (358)
|+| |.+++..+...+..+ -+.|+|...+ .+||+.+++|+.++..++.+|++.
T Consensus 312 Ei~----------d~Fa~~~l~~~e~lG~~~~pvN~~GG~la~Ghp~gatG~r~~~~l~~~lr~~--------------- 366 (390)
T PRK06504 312 EVN----------EAFASVPLAWLKATGADPERLNVNGGAIALGHPLGASGTKLMTTLVHALKQR--------------- 366 (390)
T ss_pred Eec----------ccchHHHHHHHHHhCCCCCCcCCCCcHHhcCCCcchhHHHHHHHHHHHHHhh---------------
Confidence 999 666655554333221 1236787777 679999999999999999999851
Q ss_pred CCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 321 NDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
+.++.+.++++.||...++||+++
T Consensus 367 -------------~~~~gl~~~~~ggg~g~a~ile~~ 390 (390)
T PRK06504 367 -------------GKRYGLQTMCEGGGMANVTIVERL 390 (390)
T ss_pred -------------CCCeEEEEEeecccceeEEEEEeC
Confidence 236788888888899999999863
|
|
| >TIGR02446 FadI fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.1e-26 Score=214.54 Aligned_cols=276 Identities=19% Similarity=0.254 Sum_probs=185.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+++++||+|+|+++++|+ .+++|+..+.. ....++..++...|
T Consensus 31 ~~~L~~~a~~~al~~agl~~~~Id-----~vi~G~~~~~~--------------------------~~~~~ar~~~l~aG 79 (430)
T TIGR02446 31 AVDLGKMVVSELLARSEIDPKLIE-----QLVFGQVVQMP--------------------------EAPNIAREIVLGTG 79 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCcC--------------------------ccchHHHHHHHhCC
Confidence 478999999999999999999898 88998754210 01224555666679
Q ss_pred CC-C-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHH---------------Hhh----------
Q 018323 94 FQ-G-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAG---------------FCK---------- 146 (358)
Q Consensus 94 l~-g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~---------------~~~---------- 146 (358)
+. + |.++|+.+|+||+.|+..|++.|++|++|++||+|+|+++..+.... +..
T Consensus 80 l~~~~p~~~V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (430)
T TIGR02446 80 MNVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGL 159 (430)
T ss_pred CCCCCchhhhhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccCCcccccccccccccccccccccCccccccccchh
Confidence 97 4 99999999999999999999999999999999999999764110000 000
Q ss_pred ------------------hc----ccccccCC----------------------------------CCCC-------CCC
Q 018323 147 ------------------SR----ALTTKYNG----------------------------------TPQE-------ASR 163 (358)
Q Consensus 147 ------------------~~----~l~~~~~~----------------------------------~~~~-------~~~ 163 (358)
++ .+..+++. .|.. ..|
T Consensus 160 ~~~~~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~np~a~~~~~D~~~r 239 (430)
T TIGR02446 160 KDLMPVPPAVAEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPYKQWIAEDNNIR 239 (430)
T ss_pred hhhcccCcccccccCCCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeeecCCceEecccCCCC
Confidence 00 00000000 0000 001
Q ss_pred ------------C-CcC------CCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHH
Q 018323 164 ------------P-FDC------GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAIL 224 (358)
Q Consensus 164 ------------p-f~~------~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~ 224 (358)
| |+. ..+...++|||+|+||.+++.|++.+.++.++|.+++......... .......
T Consensus 240 ~~~t~e~~~~~~~i~~p~~g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~~~----~~~~~~~ 315 (430)
T TIGR02446 240 HNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQD----MLMGPSY 315 (430)
T ss_pred CCCCHHHHhcCCceecCCCCceechhcCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCchHh----hcccHHH
Confidence 0 110 1122336999999999999999999988888999988663211000 1122346
Q ss_pred HHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHH----hhcc-----cCCCCc---ceecccC--CcCCcccch
Q 018323 225 AMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV----FSDH-----ATSGSL---AFSSTKG--AIGHLLGAA 290 (358)
Q Consensus 225 ~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~----~~~~-----~~~~~~---~v~~~k~--~~Gh~~~as 290 (358)
+++++|+++|++++|||++|+|...+.. |...++.+ |... ...+.+ |+|...+ .+|||.+|+
T Consensus 316 a~~~al~~Agl~~~Did~~Ei~daFa~~----~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gat 391 (430)
T TIGR02446 316 ATPLALQRAGLALSDLTLIDMHEAFAAQ----TLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAAT 391 (430)
T ss_pred HHHHHHHHcCCCHHHCCEEEeccccHHH----HHHHHHHhcCcchhhhcccccccCCCCCCCccCCCCCHHhcCCCcccc
Confidence 8899999999999999999999333332 33333333 2111 112345 8898888 459999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 291 GAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 291 G~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
|+..++++++||+..- . ++.+......||...++|+++
T Consensus 392 G~~~v~e~~~qL~g~a--------------------------g--~~g~~~~~~~GG~g~a~iie~ 429 (430)
T TIGR02446 392 GARMITQTLRELKRRG--------------------------G--GLGLNTACAAGGLGAAMILEV 429 (430)
T ss_pred HHHHHHHHHHHHhhcC--------------------------C--CccEEEEEecCcceEEEEEEe
Confidence 9999999999998621 1 123555666777778888875
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli. |
| >PRK07801 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-25 Score=210.36 Aligned_cols=272 Identities=19% Similarity=0.223 Sum_probs=185.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
+...|+.+|+++||+|+|++++++| +|++|+..... . . ...++..+....
T Consensus 25 ~~~~L~~~a~~~al~dagl~~~~ID-----~vv~g~~~~~~-------------------~-----~-~~~~~~~~~l~~ 74 (382)
T PRK07801 25 HPADLGAHVLKGLVDRTGIDPAAVD-----DVIFGCVDTIG-------------------P-----Q-AGNIARTSWLAA 74 (382)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcC-----EEEEEeeccCC-------------------c-----c-cccHHHHHHHHc
Confidence 3478999999999999999999998 89988531000 0 0 000112222234
Q ss_pred CC--CCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcC-hH--H--HH---H----------H-hhhc---
Q 018323 93 GF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-AL--S--MA---G----------F-CKSR--- 148 (358)
Q Consensus 93 gl--~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~-~~--~--~~---~----------~-~~~~--- 148 (358)
|+ ..|.++++.+|+|++.|+..|++.|++|++|+|||+|+|.++. +. . .. . + ...+
T Consensus 75 gl~~~~p~~~v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 154 (382)
T PRK07801 75 GLPEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYGDQE 154 (382)
T ss_pred CCCCCCceeeecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhccCCC
Confidence 54 3588999999999999999999999999999999999996533 10 0 00 0 0 0000
Q ss_pred --------ccccccCCCC------------------CC----------------------------CCCCCc-----CCC
Q 018323 149 --------ALTTKYNGTP------------------QE----------------------------ASRPFD-----CGR 169 (358)
Q Consensus 149 --------~l~~~~~~~~------------------~~----------------------------~~~pf~-----~~~ 169 (358)
...++++.++ .. ..+|.- ...
T Consensus 155 ~~~~~~a~~~~~~yG~tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~~~~~d~~~~~~t~e~~~~~~~i~~~~pl~~~ 234 (382)
T PRK07801 155 VSQFRGAELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVGGVTVDEGPRETSLEKMAGLKPLVEGGRLTAA 234 (382)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccccCccccCCcCcCCHHHHhcCCCCCCCCCcccc
Confidence 0000110000 00 011110 112
Q ss_pred CceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 018323 170 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATS 249 (358)
Q Consensus 170 ~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~g 249 (358)
+.-.++|||+++||++++.|++++.+++++|.+++...+... ....+...+++++|+++|++++|||++|+|
T Consensus 235 d~~~~~DGaaa~il~s~e~a~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~a~~~a~~~agi~~~did~~e~~--- 306 (382)
T PRK07801 235 VASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPV-----FMLTAPIPATRYALEKTGLSIDDIDVVEIN--- 306 (382)
T ss_pred cCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCChH-----hhccChHHHHHHHHHHcCCCHHHcCEeeec---
Confidence 233378999999999999999999888899999876653211 011223568999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHhhcccCC-CCcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCc
Q 018323 250 TPLGDTVEATAIRTVFSDHATS-GSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMP 326 (358)
Q Consensus 250 t~~~d~~E~~a~~~~~~~~~~~-~~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~ 326 (358)
|.+++..+...+..+ -+-|+|...+ .+||+.+|+|+.+++++++||+..
T Consensus 307 -------d~Fa~~~~~~~e~lG~~~~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~~~--------------------- 358 (382)
T PRK07801 307 -------EAFAPVVLAWLKETGADPAKVNPNGGAIALGHPLGATGAKLMTTLLHELERT--------------------- 358 (382)
T ss_pred -------ccchHHHHHHHHHhCCCchhcCCCcchhhhcCcHHHHHHHHHHHHHHHHHhc---------------------
Confidence 666655554433221 1137777777 569999999999999999999861
Q ss_pred cccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 327 LTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 327 ~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
+.++++.++.|.||...++||++.
T Consensus 359 -------~~~~gl~~~~gggg~~~~~vl~~~ 382 (382)
T PRK07801 359 -------GGRYGLQTMCEGGGTANVTIIERL 382 (382)
T ss_pred -------CCCEEEEEEcccccceeEEEEEeC
Confidence 136788899998999999999863
|
|
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-25 Score=209.30 Aligned_cols=281 Identities=22% Similarity=0.269 Sum_probs=186.1
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHH
Q 018323 12 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 91 (358)
Q Consensus 12 ~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 91 (358)
....+|+.+|+++||+++|+++++|| .|++|+..+.+. + .+.....+...
T Consensus 21 ~~~~el~~~a~~~Al~~agl~p~dID-----~vi~g~~~~~~~-----------------------g--~~~~~~~~~~~ 70 (393)
T cd00826 21 DLAHEAGAKAIAAALEPAGVAAGAVE-----EACLGQVLGAGE-----------------------G--QNCAQQAAMHA 70 (393)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEEccCCcc-----------------------c--CcHHHHHHHHc
Confidence 34578999999999999999999898 889987653211 0 01111125667
Q ss_pred cCCCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHH-------HH----HHh--------------
Q 018323 92 YGFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS-------MA----GFC-------------- 145 (358)
Q Consensus 92 lgl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~-------~~----~~~-------------- 145 (358)
+|+.+ |+++|+++|+|++.|+..|+++|++|++|++||+|+|.++.... .. .+.
T Consensus 71 lg~~~~p~~~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~r~~~~~~a~~s~~ 150 (393)
T cd00826 71 GGLQEAPAIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAENNAKEKHIDVLINKYGMRACPDAFALAGQA 150 (393)
T ss_pred CCCCCCcEEEecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccchhHHHHHHhCChhhccHHHHHHHH
Confidence 78876 99999999999999999999999999999999999998643210 00 000
Q ss_pred h------hcc-------ccccc-------CCCCCCC------------CCCCc------CCCCceeeecceEEEEeccHH
Q 018323 146 K------SRA-------LTTKY-------NGTPQEA------------SRPFD------CGRDGFVIGEGSGVLVLEELE 187 (358)
Q Consensus 146 ~------~~~-------l~~~~-------~~~~~~~------------~~pf~------~~~~g~~~geGaaa~vL~~~~ 187 (358)
. .+. +..+. ..+|..+ .+|.. ...+...++|||+++||.+++
T Consensus 151 ~~~~~~~~G~~~e~~a~v~~~~~~~~~~a~~np~a~~~~~~t~e~~~~~~~i~~~~~pl~~~~~~~~~DGAAA~vl~S~~ 230 (393)
T cd00826 151 GAEAAEKDGRFKDEFAKFGVKGRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGLNDGAAAAILMSEA 230 (393)
T ss_pred HHHHHHHcCCCHHHEEEEEEecCCCCEEEecCCCCCCCCCCCHHHHhcCCCccCCCCCEechhcCCcCCCeEEEEEecHH
Confidence 0 000 00000 0001111 11110 111222368999999999999
Q ss_pred HHHhcCC-eeeEEEEeeeeecCCCC-CCCCC----CChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHH
Q 018323 188 HAKKRGA-KIYAEVRGYGMSGDAHH-ITQPH----IDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAI 261 (358)
Q Consensus 188 ~A~~~g~-~~~a~i~g~~~~~~~~~-~~~~~----~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~ 261 (358)
.|++.+. ...++|.+.+...+... ...|+ ....+...+++++|+++||+++|||++|+| |.+++
T Consensus 231 ~a~~l~l~~~~v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~DID~~Ei~----------d~Fa~ 300 (393)
T cd00826 231 EAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIEAH----------DAFAA 300 (393)
T ss_pred HHHHcCCcccccccceEEEEEeeeccccCccccccccceeHHHHHHHHHHHcCCCHHHcCeeehh----------hhhHH
Confidence 9998874 22245555554433221 12222 233456789999999999999999999999 76666
Q ss_pred HHHhhccc-------------------CCCCcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Q 018323 262 RTVFSDHA-------------------TSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF 320 (358)
Q Consensus 262 ~~~~~~~~-------------------~~~~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~ 320 (358)
..+...+. .++..|||...+ .+||+.+|+|+.+++++++||+...
T Consensus 301 ~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP~gAtG~~~~~e~~~qL~g~a-------------- 366 (393)
T cd00826 301 NACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHPIGASGAAICAELCFELKGEA-------------- 366 (393)
T ss_pred HHHHHHHHhCCCcccchhhhhhcCccccCCcceECCCCchhhcCCCccccHHHHHHHHHHHHhhhh--------------
Confidence 66643221 134589999999 4589999999999999999998632
Q ss_pred CCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 321 NDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
...+..+.+++++++.| |..+++|++
T Consensus 367 -------g~~q~~~~~~~~~~~~G--g~g~a~~~~ 392 (393)
T cd00826 367 -------GKRQGAGAGLALLCIGG--GGGAAMCIE 392 (393)
T ss_pred -------ccccCCCcCEEEEEcCC--CceeEEEEe
Confidence 11223345778877666 456667775
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-26 Score=180.68 Aligned_cols=118 Identities=39% Similarity=0.646 Sum_probs=99.0
Q ss_pred eEEEEeeeeecCC-CCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcc
Q 018323 197 YAEVRGYGMSGDA-HHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLA 275 (358)
Q Consensus 197 ~a~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~ 275 (358)
|++|+|++.++|+ .+...+.++..++.++++++|+++|++|+|||||+.||+||+.+|..|..++.++|+......+++
T Consensus 1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~ 80 (119)
T PF02801_consen 1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVP 80 (119)
T ss_dssp SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSE
T ss_pred CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccc
Confidence 6899999999998 677777778999999999999999999999999999999999999999999999999875445799
Q ss_pred eecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCC
Q 018323 276 FSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLA 314 (358)
Q Consensus 276 v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~ 314 (358)
|++.|+++||+++++|++++++++++|++++|||++|++
T Consensus 81 v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~n~~ 119 (119)
T PF02801_consen 81 VGSVKSNIGHTEAASGLLSLAKALLALEHGTIPPTINFE 119 (119)
T ss_dssp EE-THHHH-B-GGGHHHHHHHHHHHHHHHTEE--BTT-S
T ss_pred eeccccccccccccchHHHHHHHHHHHhcCCCCCCcCCC
Confidence 999999999999999999999999999999999999975
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.2e-24 Score=202.25 Aligned_cols=273 Identities=18% Similarity=0.190 Sum_probs=187.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHH-
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK- 91 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~- 91 (358)
+...|+.+++++||+|+|++++++| .+++|+..+... ....+..++..
T Consensus 30 ~~~eL~~~a~~~al~~agl~~~~Id-----~vv~G~~~~~~~--------------------------~~~~~r~~~l~~ 78 (427)
T PRK09268 30 SNQDMLTAALDGLVDRFGLQGERLG-----EVVAGAVLKHSR--------------------------DFNLTRECVLGS 78 (427)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecccCCc--------------------------cccHHHHHHHHc
Confidence 3478999999999999999999998 899987542100 01123334444
Q ss_pred -cCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHH-------------------------H-
Q 018323 92 -YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAG-------------------------F- 144 (358)
Q Consensus 92 -lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~-------------------------~- 144 (358)
++...|.++|+++|+||+.|+..|++.|++|.+|++||+|+|+++..+.... +
T Consensus 79 gl~~~~p~~~V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (427)
T PRK09268 79 ALSPYTPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLR 158 (427)
T ss_pred CCCCCCceeeeechhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCCCcccccccccccccccccccccCcccccccccc
Confidence 4445799999999999999999999999999999999999998754321000 0
Q ss_pred h--------h---------hcc----cccccCC-----------------------------CCC------CCC------
Q 018323 145 C--------K---------SRA----LTTKYNG-----------------------------TPQ------EAS------ 162 (358)
Q Consensus 145 ~--------~---------~~~----l~~~~~~-----------------------------~~~------~~~------ 162 (358)
. . ++. +..+++. .|. ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~einP~~~~~~D~~~r~~~t~ 238 (427)
T PRK09268 159 PKHLAPEIPRNGEPRTGLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFLGLTRDNNLRPDSSL 238 (427)
T ss_pred cccccccCccccccccCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccCccCcccCCCCCCCCCH
Confidence 0 0 000 0000100 111 111
Q ss_pred ------CC-CcCCCCce-------eeecceEEEEeccHHHHHhcCCeeeEEE-EeeeeecCCCCCCCCCCChHHHHHHHH
Q 018323 163 ------RP-FDCGRDGF-------VIGEGSGVLVLEELEHAKKRGAKIYAEV-RGYGMSGDAHHITQPHIDGKGAILAMT 227 (358)
Q Consensus 163 ------~p-f~~~~~g~-------~~geGaaa~vL~~~~~A~~~g~~~~a~i-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (358)
+| |+...+|. .++|||+|+||.+++.|++.+.++..+| .+.....+..... ++ .......+++
T Consensus 239 e~l~~~~~v~~p~~~g~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~-~~-~~~~~~~a~~ 316 (427)
T PRK09268 239 EKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVHGK-EG-LLMAPAYAVP 316 (427)
T ss_pred HHHhCCCcccccCCCCceeccccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCccccc-ch-hhccHHHHHH
Confidence 11 22111232 3799999999999999999998887666 4444444422111 11 2234457999
Q ss_pred HHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhh----------cccC--------CCCcceecccCC--cCCcc
Q 018323 228 RALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFS----------DHAT--------SGSLAFSSTKGA--IGHLL 287 (358)
Q Consensus 228 ~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~----------~~~~--------~~~~~v~~~k~~--~Gh~~ 287 (358)
++|+++|++++|||++|+| |.+++..+.. .+.. -...|+|...+. +||+.
T Consensus 317 ~a~~~AGl~~~Did~~Ei~----------d~Fa~~~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP~ 386 (427)
T PRK09268 317 RLLARNGLTLQDFDFYEIH----------EAFASQVLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPF 386 (427)
T ss_pred HHHHHcCCCHHHCCEEEec----------cccHHHHHHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhcCCCc
Confidence 9999999999999999999 5555552211 1110 124789999985 49999
Q ss_pred cchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 288 GAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 288 ~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
+|+|+..++++++||+.+ ..++.+++.+.-||...++||++
T Consensus 387 gATG~~~v~e~~~QL~~~----------------------------~~~~gl~~~c~~gG~g~a~~~e~ 427 (427)
T PRK09268 387 AATGGRIVATLAKLLAEK----------------------------GSGRGLISICAAGGQGVTAILER 427 (427)
T ss_pred ccchHHHHHHHHHHHHhc----------------------------CCCEEEEEEcccCchheEEEEeC
Confidence 999999999999999752 24789999999999999999985
|
|
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-23 Score=192.66 Aligned_cols=265 Identities=22% Similarity=0.289 Sum_probs=190.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcCC
Q 018323 15 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 94 (358)
Q Consensus 15 ~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 94 (358)
..|+..+.++++ +|++ +++| .|++|+..+.. ...+..++...|+
T Consensus 26 ~~L~~~a~~~~~--~gi~-~~Id-----~vi~G~~~~~~----------------------------~~~~r~~~~~~Gl 69 (361)
T PRK06690 26 QQLAAPLLTFLS--KGME-REID-----DVILGNVVGPG----------------------------GNVARLSALEAGL 69 (361)
T ss_pred HHHHHHHHHHHH--ccch-hhcC-----EEEEEecCCCc----------------------------chHHHHHHHHcCC
Confidence 788899999984 4886 7788 89998754221 1223347788888
Q ss_pred C-C-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHH--HHH----------h-hhcccccccCC---
Q 018323 95 Q-G-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM--AGF----------C-KSRALTTKYNG--- 156 (358)
Q Consensus 95 ~-g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~--~~~----------~-~~~~l~~~~~~--- 156 (358)
. + |+++|+++|+||+.|+..|++.|++|++|++||+|+|.++..+.. ..+ . ..+.+..+++.
T Consensus 70 ~~~~p~~tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre 149 (361)
T PRK06690 70 GLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITRE 149 (361)
T ss_pred CCCCCceehhhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHH
Confidence 7 5 999999999999999999999999999999999999987653210 000 0 00000001100
Q ss_pred ------------------CCC-------------CCC-------------CC-CcC-----CCCceeeecceEEEEeccH
Q 018323 157 ------------------TPQ-------------EAS-------------RP-FDC-----GRDGFVIGEGSGVLVLEEL 186 (358)
Q Consensus 157 ------------------~~~-------------~~~-------------~p-f~~-----~~~g~~~geGaaa~vL~~~ 186 (358)
++. +.. +| |+. ..+.-.++|||+++||+++
T Consensus 150 ~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s~ 229 (361)
T PRK06690 150 MQDEYACLSYKRTLQALEKGYIHEEILSFNGLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEE 229 (361)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCceecccCccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEecH
Confidence 000 001 11 211 0111226999999999999
Q ss_pred HHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhh
Q 018323 187 EHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFS 266 (358)
Q Consensus 187 ~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~ 266 (358)
+.|++++.++.++|.+++.... .+.....+...+++++|+++|++++|||++|+| |.+++..++.
T Consensus 230 e~A~~lg~~p~~~i~~~~~~~~-----~~~~~~~~~~~a~~~al~~Agl~~~Did~~ei~----------eafa~~~~~~ 294 (361)
T PRK06690 230 GQARKLGYKPVLRFVRSAVVGV-----DPNLPGTGPIFAVNKLLNEMNMKVEDIDYFEIN----------EAFASKVVAC 294 (361)
T ss_pred HHHHHcCCCceEEEEEEEEecc-----CcccchhHHHHHHHHHHHHcCCCHHHcCEeeec----------chhHHHHHHH
Confidence 9999999899889999886542 122234567789999999999999999999999 8888888876
Q ss_pred cccCCC-CcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeecc
Q 018323 267 DHATSG-SLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSF 343 (358)
Q Consensus 267 ~~~~~~-~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 343 (358)
.+..+. +.+++...+ .+||+.|++|+.++++++.+|+. .+.++.++...
T Consensus 295 ~e~lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~----------------------------~~~~~g~~~~c 346 (361)
T PRK06690 295 AKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKR----------------------------EDMKYGIATLG 346 (361)
T ss_pred HHhcCCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHHH----------------------------hCCCEEEEEEc
Confidence 554321 235666666 56999999999999999999865 12477888888
Q ss_pred ccccceeeeEeeecC
Q 018323 344 GFGGTNASLLFTKCQ 358 (358)
Q Consensus 344 g~gG~~~~~il~~~~ 358 (358)
.-||...++|+++.+
T Consensus 347 ~~gG~g~a~~~e~~~ 361 (361)
T PRK06690 347 IGGGIGLALLFEKVE 361 (361)
T ss_pred ccCcceeEEEEEecC
Confidence 999999999999854
|
|
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.5e-23 Score=194.59 Aligned_cols=271 Identities=20% Similarity=0.221 Sum_probs=192.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+..+.+++|+++|++++++| .|++|+....- .....++..++..-|
T Consensus 29 ~~~L~~~~~~~~l~r~~i~~~~id-----~vi~G~~~~~g-------------------------~~g~n~aR~~al~ag 78 (417)
T PRK06025 29 PQHLAATVLKALAERNGLNTADVD-----DIIWSTSSQRG-------------------------KQGGDLGRMAALDAG 78 (417)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCC-----EEEEEcCCCcC-------------------------cccCcHHHHHHHhCC
Confidence 356778899999999999998888 89999764210 001235566677778
Q ss_pred CCC--CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHH------H-----Hhhh-ccccc-------
Q 018323 94 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA------G-----FCKS-RALTT------- 152 (358)
Q Consensus 94 l~g--p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~------~-----~~~~-~~l~~------- 152 (358)
|.- |.++|+..|+||+.|+..|++.|++|++|++|++|+|+++..+.+. . .... ..+..
T Consensus 79 lp~~vp~~tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~M 158 (417)
T PRK06025 79 YDIKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQ 158 (417)
T ss_pred CCCCCCeeeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccCCCCcccccccCcccccccCCCCH
Confidence 853 9999999999999999999999999999999999999987544210 0 0000 00000
Q ss_pred ---------ccC-----------------------------------------CCCCCCCC------------C-CcC--
Q 018323 153 ---------KYN-----------------------------------------GTPQEASR------------P-FDC-- 167 (358)
Q Consensus 153 ---------~~~-----------------------------------------~~~~~~~~------------p-f~~-- 167 (358)
+++ .+.++..| | |+.
T Consensus 159 g~~ae~~a~~~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~~~~~~~~~~~De~~R~~~t~e~la~L~p~F~~~~ 238 (417)
T PRK06025 159 GVCGDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVYRDDGSVALDHEEFPRPQTTAEGLAALKPAFTAIA 238 (417)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEEcCCCCEEecCCCCCCCCCCHHHHcCCCCCccccc
Confidence 000 00111122 2 331
Q ss_pred ----CCCce-------------------------eeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCC
Q 018323 168 ----GRDGF-------------------------VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHID 218 (358)
Q Consensus 168 ----~~~g~-------------------------~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~ 218 (358)
..+|. .++|||+++||++++.|++++.+++++|.|++...+. |...
T Consensus 239 ~~~~~~~g~~~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~g~~~a~~~-----p~~~ 313 (417)
T PRK06025 239 DYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDD-----PTLM 313 (417)
T ss_pred cccccCCccccccccccccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEEEEEEecCC-----chhh
Confidence 01343 2699999999999999999999999999999987643 2222
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCC-CCcceecccC--CcCCcccchhHHHH
Q 018323 219 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS-GSLAFSSTKG--AIGHLLGAAGAVEA 295 (358)
Q Consensus 219 ~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~-~~~~v~~~k~--~~Gh~~~asG~~~l 295 (358)
..+...+++++|+++|++++|||++|+| |.++...+...+..+ ...+++...+ .+||+.+++|+..+
T Consensus 314 ~~~p~~Ai~~aL~~AGl~~~DID~~ei~----------eaFa~~~l~~~~~lg~~~~~vN~~GG~ia~GHp~GaTGa~~v 383 (417)
T PRK06025 314 LNAPVPAAKKVLAKAGLTKDDIDLWEIN----------EAFAVVAEKFIRDLDLDRDKVNVNGGAIALGHPIGATGSILI 383 (417)
T ss_pred cccHHHHHHHHHHHcCCCHHHCcEEEEc----------hHHHHHHHHHHHHcCCChhhccccCCHHhcCCchhHHHHHHH
Confidence 2344679999999999999999999999 776655433221111 1134555554 88999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 296 IFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 296 ~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
++++.+|+.+ +.++.++..++.||...++||++.
T Consensus 384 ~~ll~qL~~~----------------------------g~~~Gl~~~c~~GG~g~A~lle~~ 417 (417)
T PRK06025 384 GTVLDELERR----------------------------GLKRGLVTMCAAGGMAPAIIIERV 417 (417)
T ss_pred HHHHHHHHHh----------------------------CCCeEEEEEEeeccceeEEEEEeC
Confidence 9999999651 135678888899999999999873
|
|
| >KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.8e-24 Score=185.35 Aligned_cols=245 Identities=27% Similarity=0.339 Sum_probs=174.2
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
+..+|+..|.+.||+++++++.+.+ -||+|... +..+.-.++.+.+.--
T Consensus 29 ~A~~Lgsvaikaalera~v~~~~v~-----eVi~GnVl--------------------------~AnlGQapaRQaalgA 77 (396)
T KOG1390|consen 29 TATELGSVAIKAALERAVVPPSDVA-----EVIFGNVL--------------------------SANLGQAPARQAALGA 77 (396)
T ss_pred chhhHHHHHHHHHHHhcCCCHHHhh-----hhhhcccc--------------------------ccccCcchHHHHHhhc
Confidence 5678999999999999999877654 45555422 1111124456666666
Q ss_pred CCCC--CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhc---------------cccccc-
Q 018323 93 GFQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSR---------------ALTTKY- 154 (358)
Q Consensus 93 gl~g--p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~---------------~l~~~~- 154 (358)
||.- |+++|+.-|+||+.|+.+|++.|+.|..|+++++|.|++++.+.+. ..+.+ .|.+.|
T Consensus 78 Glp~sv~~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP~~~-~~R~g~~~G~~~l~Dgi~~DGL~D~y~ 156 (396)
T KOG1390|consen 78 GLPYSVPATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVPYLY-VARGGVKYGGVQLVDGIVKDGLTDAYD 156 (396)
T ss_pred CCCcceeeEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCcchh-hhccCcCcCCeeeeechhhcchHHHhc
Confidence 7653 8999999999999999999999999999999999999988776221 11100 000000
Q ss_pred ---------------CC-------------------------------------------CCCC------------CCCC
Q 018323 155 ---------------NG-------------------------------------------TPQE------------ASRP 164 (358)
Q Consensus 155 ---------------~~-------------------------------------------~~~~------------~~~p 164 (358)
.. +.++ ..+|
T Consensus 157 ~~~MG~~aE~~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~rg~~~v~~DEe~~k~~~~~~~~~l~~ 236 (396)
T KOG1390|consen 157 KCHMGICAENTAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTKRGETVVKKDEEPKKGSNIEKLSKLRP 236 (396)
T ss_pred cCCcchhHhhhHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecCCCcEEeccchhhhcccchhhhccccc
Confidence 00 0000 0111
Q ss_pred CcCCCCce-------eeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 018323 165 FDCGRDGF-------VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQS 237 (358)
Q Consensus 165 f~~~~~g~-------~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~ 237 (358)
.-....|. .+.|||+|+||.+.+.+++.|.+|+++|.+|+... ..|.....+...++.++|+++|+..
T Consensus 237 vF~~~ggTVTaaNAS~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa-----~~P~df~iaP~laipk~lk~aG~~~ 311 (396)
T KOG1390|consen 237 VFKEDGGTVTAANASTLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAA-----TEPIDFTIAPALAIPKALKKAGLEQ 311 (396)
T ss_pred eeecCCCeeccccccccCccceeeEEechhhHhHcCCchHHHHhhhhhhc-----cChhhcccchHHHHHHHHHHcCcch
Confidence 11112222 28999999999999999999999999999998655 2343334455678999999999999
Q ss_pred CCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcc-eecccC--CcCCcccchhHHHHHHHHHHHHh
Q 018323 238 HQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLA-FSSTKG--AIGHLLGAAGAVEAIFAVLAIHH 304 (358)
Q Consensus 238 ~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~-v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~ 304 (358)
+|||++|++ |+++...+...+..+.++. |+-..+ .+|||+|+||+.-+...+..|+.
T Consensus 312 sdVd~~EiN----------EAFs~v~lA~iK~LgldP~kVNv~GGAValGHPlG~SGaRi~~tL~~~L~~ 371 (396)
T KOG1390|consen 312 SDVDYWEIN----------EAFSVVVLANIKKLGLDPSKVNVHGGAVALGHPLGMSGARILVTLLHTLEQ 371 (396)
T ss_pred hhhhHHhhh----------hhhhHHHHHHHHHhCCCHhhccCCCceeecCCCcCCcchhHHHHHHHHHHh
Confidence 999999999 9998877755444333333 343444 89999999999999999999876
|
|
| >KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=5e-24 Score=180.24 Aligned_cols=293 Identities=21% Similarity=0.291 Sum_probs=194.1
Q ss_pred CCccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhh
Q 018323 1 MRTRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRIL 80 (358)
Q Consensus 1 ~~~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (358)
|..|+++..+- .-.++.+|...||+|+++..++++ ..-+|.++|.+.-+
T Consensus 18 f~kpg~~~~~d--ypd~a~ea~tkal~da~ikys~vq-qa~vgyvfgdstcg---------------------------- 66 (408)
T KOG1406|consen 18 FEKPGRVADWD--YPDFAKEAITKALQDAGIKYSEVQ-QAVVGYVFGDSTCG---------------------------- 66 (408)
T ss_pred ecCCCcccCCC--CchHHHHHHHHHHHhcCCCHHHHH-hhhheeeecCCccc----------------------------
Confidence 44555554433 346889999999999999987774 66778888765422
Q ss_pred hhHHHHHHHHHcCCCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHH-HHhh-------hcccc
Q 018323 81 INMASGHVSMKYGFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA-GFCK-------SRALT 151 (358)
Q Consensus 81 ~~~~a~~ia~~lgl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~-~~~~-------~~~l~ 151 (358)
.|.-+.+|++| |.+.|++.|++|..||.+|.+.|++|..|+||+.|.|.+....... .+++ ...++
T Consensus 67 -----qraiyevgmtgipi~nvnnncatgssalflakqiiesgn~dcvlalgfekm~~gsl~~k~~dra~p~dkhi~~m~ 141 (408)
T KOG1406|consen 67 -----QRAIYEVGMTGIPIYNVNNNCATGSSALFLAKQIIESGNSDCVLALGFEKMERGSLSNKAADRALPVDKHISVMS 141 (408)
T ss_pred -----hHHHHhccccCcceeeccCccccCchHHHHHHHHHhcCCcceEEeechhhhCCcccchhhhhccCcchhhHHHHH
Confidence 24456789999 9999999999999999999999999999999999999853221100 0000 00000
Q ss_pred ccc-----------------------CC------------CCCCCCCCCcCCCCcee---------------------ee
Q 018323 152 TKY-----------------------NG------------TPQEASRPFDCGRDGFV---------------------IG 175 (358)
Q Consensus 152 ~~~-----------------------~~------------~~~~~~~pf~~~~~g~~---------------------~g 175 (358)
..+ .. .....--||++-++.|. .+
T Consensus 142 e~ygl~a~pmaaqmfgnagkehmekygtk~ehfakiawknhkhsvnnpysqf~deysldqvm~s~~v~dflt~lqccpts 221 (408)
T KOG1406|consen 142 ETYGLEAAPMAAQMFGNAGKEHMEKYGTKPEHFAKIAWKNHKHSVNNPYSQFRDEYSLDQVMKSPQVVDFLTKLQCCPTS 221 (408)
T ss_pred hhccCCCCcchHHHhhhhHHHHHHHhCCCHHHHhHhhhhccccccCChhHhhhhhccHHHHhcchHHHHHHHHhhcCCCC
Confidence 000 00 00111223333222222 79
Q ss_pred cceEEEEeccHHHHHhcCCeee-EEEEeeeeecCCCCCCCC-CC----ChHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 018323 176 EGSGVLVLEELEHAKKRGAKIY-AEVRGYGMSGDAHHITQP-HI----DGKGAILAMTRALKQSGLQSHQVDYVNAHATS 249 (358)
Q Consensus 176 eGaaa~vL~~~~~A~~~g~~~~-a~i~g~~~~~~~~~~~~~-~~----~~~~~~~~~~~al~~agl~~~did~i~~h~~g 249 (358)
||++|.||.++...++.|..-. ++|.|..+.+|..+.... +. -......+.++++++.|++|+||++||+|.+.
T Consensus 222 dgaaaailaseafv~k~gl~~qaveivg~em~td~ps~faeks~ikm~gfdm~~~aa~~l~aksgltpndvqvielhdcf 301 (408)
T KOG1406|consen 222 DGAAAAILASEAFVRKHGLEKQAVEIVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAKRLFAKSGLTPNDVQVIELHDCF 301 (408)
T ss_pred CchHHHHHhHHHHHHhcccHHHHHHHHHHHhccCCchhhhhhhhhhhhcchHHHHHHHHHHHHcCCCcccceEEEeeccc
Confidence 9999999999999888876543 357777777764321110 00 11334578899999999999999999999765
Q ss_pred CCCCcHHHHHHHHHH-hh------------cccCCCCcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCC
Q 018323 250 TPLGDTVEATAIRTV-FS------------DHATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLA 314 (358)
Q Consensus 250 t~~~d~~E~~a~~~~-~~------------~~~~~~~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~ 314 (358)
.+. |.-.++.+ ++ +...++.+-++...+ ..||++||+|+++.++.+.|||.-.
T Consensus 302 s~n----elityealglcpegqg~~~vdrgdntyggkwvinpsggliskghplgatglaqcaelcwqlrg~a-------- 369 (408)
T KOG1406|consen 302 SAN----ELITYEALGLCPEGQGGEFVDRGDNTYGGKWVINPSGGLISKGHPLGATGLAQCAELCWQLRGLA-------- 369 (408)
T ss_pred chh----hhhhHHHhcCCCCCCCceeeecCCCccCceEEECCCCccccCCCcCccchHHHHHHHHHHHhhhh--------
Confidence 443 44444333 11 112245566676766 5699999999999999999998732
Q ss_pred CCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEe
Q 018323 315 KPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLF 354 (358)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il 354 (358)
...+..+.+.+|-++.|+||.....+.
T Consensus 370 -------------gkrqvpnakvalqhnlgiggavvv~ly 396 (408)
T KOG1406|consen 370 -------------GKRQVPNAKVALQHNLGIGGAVVVALY 396 (408)
T ss_pred -------------ccccCCCchhhhhhccCcCceeEEEEe
Confidence 122233457788888999987665544
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.1e-22 Score=187.41 Aligned_cols=273 Identities=20% Similarity=0.169 Sum_probs=180.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+|||+++++|| ++++.+.. . .. ...++..+|
T Consensus 24 ~~~L~~eA~~~Al~DAgl~~~dID-----~~~~~~~~-~-----------------------~~-------~~~l~~~lG 67 (386)
T PRK07855 24 ELRLACEAVLAALDDAGLAPSDVD-----GLVTFTMD-T-----------------------NP-------EIAVARALG 67 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEecCc-c-----------------------cc-------HHHHHHHCC
Confidence 478999999999999999999898 77763311 0 00 124888999
Q ss_pred CCC--CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeec--CCCcChH------------H---HHHHhh-hcccc--
Q 018323 94 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGT--ESSIDAL------------S---MAGFCK-SRALT-- 151 (358)
Q Consensus 94 l~g--p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~--e~~~~~~------------~---~~~~~~-~~~l~-- 151 (358)
+++ |...+.++|+++..+|..|++.|++|.+|+|||++. +...... . ...+.. .+...
T Consensus 68 l~~~~~~~~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 147 (386)
T PRK07855 68 IGELKFFSRIHYGGGAACATVQQAAMAVATGVADVVVCYRAFNERSGMRFGQGQTGLAENPTSTGVDYGWSYPHGLLTPA 147 (386)
T ss_pred CCCCcceeeecCCcHHHHHHHHHHHHHHHCCCCCEEEEEeecccccccccccccccccccccccccchhhhhhcCCCChH
Confidence 976 445789999999999999999999999999999987 2210000 0 000000 00000
Q ss_pred -----------ccc------------------CCCCCCC-----------------CCCCcCCCCceeeecceEEEEecc
Q 018323 152 -----------TKY------------------NGTPQEA-----------------SRPFDCGRDGFVIGEGSGVLVLEE 185 (358)
Q Consensus 152 -----------~~~------------------~~~~~~~-----------------~~pf~~~~~g~~~geGaaa~vL~~ 185 (358)
..+ ..+|... +.|+.. -+...++|||+|+||.+
T Consensus 148 ~~~al~a~~ym~~~G~t~e~lA~vavk~~~~A~~NP~A~~~~~~~t~e~vl~s~~Ia~Pl~~-~d~~~~sDGAaAvvl~s 226 (386)
T PRK07855 148 AWVAMLARRYMHEYGATSEDFGRVAVADRKHAATNPKAWFYGRPITLEDHQNSRWIAEPLRL-LDCCQESDGAVALVVTS 226 (386)
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhcChHhhhcCCCCCHHHHhcCCcccCCchh-hhcCCcCCceEEEEEec
Confidence 000 0012111 112221 23334899999999999
Q ss_pred HHHHHhcCCeeeEEEEeeeeecCCCCCC-----CCCCC-hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHH
Q 018323 186 LEHAKKRGAKIYAEVRGYGMSGDAHHIT-----QPHID-GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEAT 259 (358)
Q Consensus 186 ~~~A~~~g~~~~a~i~g~~~~~~~~~~~-----~~~~~-~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~ 259 (358)
++.|++.+.++ ++|+|++..++..... .++.. ......+++++|+++||+++|||++|+|.+.+.. |..
T Consensus 227 ee~A~~l~~~p-v~I~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~AGi~~~DiDv~El~D~Ft~~----~l~ 301 (386)
T PRK07855 227 AERARDLKQRP-AVIKAAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQSGLGPADIDTAILYDHFTPF----VLM 301 (386)
T ss_pred HHHHhhCCCCC-EEEEEEEEecCCccccccccccccccccchHHHHHHHHHHHcCCCHHHCcEEEeccCCcHH----HHH
Confidence 99999987776 6999998765432111 11111 2334578999999999999999999999666554 666
Q ss_pred HHHHH-hhccc------------CCCCcceecccCCc--CCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCC
Q 018323 260 AIRTV-FSDHA------------TSGSLAFSSTKGAI--GHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNF 324 (358)
Q Consensus 260 a~~~~-~~~~~------------~~~~~~v~~~k~~~--Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~ 324 (358)
.++.+ |+.+. .++.+|+|...+.+ ||+. |+.+++++++||+..-
T Consensus 302 ~~E~lG~~~~Ge~~~~v~~G~~~~~G~lPvN~sGGll~~gh~~---G~~~i~E~~~QLrG~a------------------ 360 (386)
T PRK07855 302 QLEELGFCGRGEAKDFIADGALELGGRLPINTHGGQLGEAYIH---GMNGIAEAVRQLRGTS------------------ 360 (386)
T ss_pred HHHHcCCCCCCcHHHHHHCCCcccCCcccccCCCcccccCchh---hHHHHHHHHHHHhCCC------------------
Confidence 66555 33222 24679999999965 6755 9999999999999852
Q ss_pred CccccCCCCCCcEEEeeccccccceeeeEe
Q 018323 325 MPLTASKDMPISAALSNSFGFGGTNASLLF 354 (358)
Q Consensus 325 ~~~~~~~~~~~~~~l~~~~g~gG~~~~~il 354 (358)
. .+..+.+++|+++.|-- ..+++||
T Consensus 361 ---~-~QV~~a~~gl~~~~Gg~-~~~~~~~ 385 (386)
T PRK07855 361 ---V-NQVPGVENVLVTAGTGV-PTSGLIL 385 (386)
T ss_pred ---c-ccCCCCcEEEEECCCCc-cceeEEe
Confidence 0 12234578888876633 3344655
|
|
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.5e-23 Score=192.33 Aligned_cols=253 Identities=17% Similarity=0.171 Sum_probs=171.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+++|+++++++ .+++++...+ ...+..+..|+..|
T Consensus 94 ~~~~la~~Aa~~aL~~agl~~~~Id-----~li~~~~~~~--------------------------~~~p~~a~~v~~~L 142 (372)
T PRK07515 94 IQAEMGVAAARQALARAGRTAEDID-----AVIVACSNMQ--------------------------RAYPAMAIEIQQAL 142 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCCCC--------------------------CCCcHHHHHHHHhc
Confidence 3457999999999999999998887 7888765311 11123467899999
Q ss_pred CCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCce
Q 018323 93 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 172 (358)
Q Consensus 93 gl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g~ 172 (358)
|+++++++++.+|+|++.||..|+++|++|.+|.|||+++|.+.... -|.....++
T Consensus 143 gl~~~~~~v~~aCasg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~------------------------~~~d~~~~~ 198 (372)
T PRK07515 143 GIEGFAFDMNVACSSATFGIQTAANAIRSGSARRVLVVNPEICSGHL------------------------NFRDRDSHF 198 (372)
T ss_pred CCCCcEEEecchhHHHHHHHHHHHHHHHcCCCCEEEEEeeecccccc------------------------cccCCCCCE
Confidence 99999999999999999999999999999999999999999742111 022334679
Q ss_pred eeecceEEEEeccHHHHHhcC-CeeeEEEEe------------eeeecCCCCCCCCCC----ChH--------HHHHHHH
Q 018323 173 VIGEGSGVLVLEELEHAKKRG-AKIYAEVRG------------YGMSGDAHHITQPHI----DGK--------GAILAMT 227 (358)
Q Consensus 173 ~~geGaaa~vL~~~~~A~~~g-~~~~a~i~g------------~~~~~~~~~~~~~~~----~~~--------~~~~~~~ 227 (358)
++||||+|+||++.+.+..++ ..++..... +....+..+...+.. .+. ...++++
T Consensus 199 lfGDgAaA~vL~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~ 278 (372)
T PRK07515 199 IFGDVATAVIVERADTATSAGGFEILGTRLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIV 278 (372)
T ss_pred EecCccEEEEEeeccccccCCCceEEEEEeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHH
Confidence 999999999999866543222 234333211 110011111111110 121 2467899
Q ss_pred HHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCC
Q 018323 228 RALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVA 307 (358)
Q Consensus 228 ~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~i 307 (358)
++|+++|++++|||+|.+|.+++...|.+ ++++|+........+ ..-..+||+.+|+=.+.+-++ ++ .+
T Consensus 279 ~~L~~~gl~~~dId~~~~Hq~~~~~~d~~----~~~llg~~~~~~~~~--~~~~~~GNt~sasi~~~L~~~----~~-~~ 347 (372)
T PRK07515 279 EHLAENGLTPADVKRFWLHQANINMNQLI----GKKVLGRDATPEEAP--VILDEYANTSSAGSIIAFHKH----SD-DL 347 (372)
T ss_pred HHHHHcCCCHHHCCEEEECCCCHHHHHHH----HHHhccCCCChhhce--EeHHhcCCchhhHHHHHHHHH----hc-cC
Confidence 99999999999999999999998887765 344454321111112 234578998888765544432 11 10
Q ss_pred CCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 308 PLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 308 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
.+.+.++..+||.|-+..++||+|
T Consensus 348 -------------------------~~Gd~vll~~~G~G~~~~~~ll~~ 371 (372)
T PRK07515 348 -------------------------AAGDLGVICSFGAGYSIGSVIVRK 371 (372)
T ss_pred -------------------------CCCCEEEEEEecccHHHHHHHhcc
Confidence 123668888999998888888876
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-21 Score=180.95 Aligned_cols=265 Identities=16% Similarity=0.097 Sum_probs=170.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+|||+++++|| +++.+.. +.+ ... .+. ...+...+|
T Consensus 24 ~~el~~eA~~~Al~DAgl~~~dID-----~~~~~~~-~~~------------------~~~----~~~---~~~~~~~~G 72 (352)
T PRK07937 24 GVEMLMPCFAELYAELGITKSDIG-----FWCSGSS-DYL------------------AGR----AFS---FISAIDSIG 72 (352)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcc-ccc------------------ccc----ccc---hhhHHhhcc
Confidence 478999999999999999999987 6654432 000 000 000 012345567
Q ss_pred CC-C-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHH-----------H-----------HHHhhhcc
Q 018323 94 FQ-G-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS-----------M-----------AGFCKSRA 149 (358)
Q Consensus 94 l~-g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~-----------~-----------~~~~~~~~ 149 (358)
+. + |...+.+ +|..||..|++.|++|.+|+|||++.|++..... + ..+...+.
T Consensus 73 ~~~~~~~~~v~~---~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~Al~a~~y 149 (352)
T PRK07937 73 AVPPINESHVEM---DAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLWPDSVSMAGLQARAG 149 (352)
T ss_pred CCCCCceEEecC---cHHHHHHHHHHHHhcCCCCEEEEEEecccCccchhhhhhccCCcceeccCCCchHHHHHHHHHHH
Confidence 73 3 4555553 6888999999999999999999999986431000 0 00000000
Q ss_pred ccccc------------------CCCCCCCCC--------------CCcCCCCceeeecceEEEEeccHHHHHhcCCeee
Q 018323 150 LTTKY------------------NGTPQEASR--------------PFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIY 197 (358)
Q Consensus 150 l~~~~------------------~~~~~~~~~--------------pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~ 197 (358)
+ +.+ ..+|....+ |+. ..+...++|||+|+||.+++.|++.+.++
T Consensus 150 m-~~yG~t~e~lA~vavk~r~nA~~NP~A~~rit~edvl~s~~ia~PL~-l~d~~~~~DGAaA~vl~s~~~A~~l~~~p- 226 (352)
T PRK07937 150 L-DAGKWTEEQMAEVAARSRADARRNPSAEPSISVDELLARPYFADPLR-RHDIAPITDGAAAVVLAAGDRARELRERP- 226 (352)
T ss_pred H-HHhCCCHHHHHHHHHHHHHHHhhCchhhccCCHHHHhcCCcccCCch-hhcCCCCCCcceEEEEecHHHHHHcCCCc-
Confidence 0 000 001111111 111 12222389999999999999999998877
Q ss_pred EEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHH-cCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccC--CCCc
Q 018323 198 AEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ-SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHAT--SGSL 274 (358)
Q Consensus 198 a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~--~~~~ 274 (358)
++|.|++...+.......+.. ...++++++++ +|++|+|||++|+| |.+++..+...+.. .+++
T Consensus 227 v~I~g~~~~~~~~~~~~~d~~---~~~~~~~a~~~aAgi~~~diD~~Ei~----------D~F~~~~l~~~e~lGl~g~~ 293 (352)
T PRK07937 227 AWITGIEHRIESPSLGARDLT---RSPSTALAAEAATGGDAGGVDVAELH----------APFTHQELILREALGLGDKT 293 (352)
T ss_pred EEEEEEEEeeCCccccccccc---cHHHHHHHHHHhcCCCHHHCCEEEEe----------CCChHHHHHHHHHcCCCCCC
Confidence 899999887665432222211 12344556666 59999999999999 44444444332222 2568
Q ss_pred ceecccCCc-CCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeecccc--ccceee
Q 018323 275 AFSSTKGAI-GHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGF--GGTNAS 351 (358)
Q Consensus 275 ~v~~~k~~~-Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~--gG~~~~ 351 (358)
|+|...+.+ ||+.+++|+.+++++++||+++ ..+++|+++.|- +.+++.
T Consensus 294 pvN~~GG~l~ghp~gatG~~~~~e~~~QL~g~----------------------------~a~~~l~~~~Gg~~~~~~~v 345 (352)
T PRK07937 294 KVNPSGGALAANPMFAAGLERIGEAARHIWDG----------------------------SARRALAHATSGPALQQNLV 345 (352)
T ss_pred CcCCCccchhcCchhHHHHHHHHHHHHHHhcc----------------------------CCCEEEEecccccccceEEE
Confidence 999888833 9999999999999999999874 247788887763 355666
Q ss_pred eEeee
Q 018323 352 LLFTK 356 (358)
Q Consensus 352 ~il~~ 356 (358)
+||++
T Consensus 346 ~v~~~ 350 (352)
T PRK07937 346 AVLEG 350 (352)
T ss_pred EEEec
Confidence 66664
|
|
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.3e-21 Score=187.31 Aligned_cols=276 Identities=15% Similarity=0.134 Sum_probs=187.4
Q ss_pred HHHHHHHHHHHHHHHCCCC--CCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHH
Q 018323 14 FIAYALCAADEALHDAKWL--PSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 91 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~--~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 91 (358)
...|+.+|+++||+|||++ +++|| +++++..... . .+..+..++..
T Consensus 27 ~~~L~~eA~~~Al~DAGl~~~~~dID-----~v~v~~~~~~------------------------~---~~~~~~~la~~ 74 (498)
T PRK08257 27 PVDLMAAAARAAAADAGADAVLEAID-----SVAVVNQLSW------------------------R---YRDPPGLLAER 74 (498)
T ss_pred HHHHHHHHHHHHHHhcCCCcCHHHCC-----EEEEeccccc------------------------c---ccCHHHHHHHH
Confidence 4789999999999999999 88898 8887653210 0 11234678999
Q ss_pred cCCCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHH----------------------------
Q 018323 92 YGFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA---------------------------- 142 (358)
Q Consensus 92 lgl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~---------------------------- 142 (358)
+|+.. +......+|.++..+|..|++.|++|++|+|||+|+|.+.+.....
T Consensus 75 lGl~p~~~~~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (498)
T PRK08257 75 LGADPARTVYSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMAS 154 (498)
T ss_pred cCCCCcceeEecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccc
Confidence 99975 4555667888999999999999999999999999999743211000
Q ss_pred HHhh-hcccc-------------cccC----------------------CCCC--------------------CCCCCCc
Q 018323 143 GFCK-SRALT-------------TKYN----------------------GTPQ--------------------EASRPFD 166 (358)
Q Consensus 143 ~~~~-~~~l~-------------~~~~----------------------~~~~--------------------~~~~pf~ 166 (358)
.+.. .+... ..++ .+|. --+-||.
T Consensus 155 ~~e~~~G~~~p~~~yal~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~NP~A~~r~~~t~eevl~~~~~~rmIa~Pl~ 234 (498)
T PRK08257 155 PAELRHGLDRPVYVYPLFENALRAALGRSPEEHRAEMGELWAPFSAVAAKNPHAWIPRERSAEEIVTPTPDNRMIAWPYT 234 (498)
T ss_pred hhhhhcCCCCcchHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhhCHHHhhCCCCCHHHHhcccCCCCeeeCCcc
Confidence 0000 00000 0000 0010 0112332
Q ss_pred CCCCceeeecceEEEEeccHHHHHhcCC--eeeEEEEeeeeecCCCCCC-CCCC-ChHHHHHHHHHHHHHcCCCCCCccE
Q 018323 167 CGRDGFVIGEGSGVLVLEELEHAKKRGA--KIYAEVRGYGMSGDAHHIT-QPHI-DGKGAILAMTRALKQSGLQSHQVDY 242 (358)
Q Consensus 167 ~~~~g~~~geGaaa~vL~~~~~A~~~g~--~~~a~i~g~~~~~~~~~~~-~~~~-~~~~~~~~~~~al~~agl~~~did~ 242 (358)
.-......+||++|+||.+++.|++.+. ...++|.|++..++..... .++. .......+.+++|+++|++++|||+
T Consensus 235 ~ldca~~~~DGaaAvil~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~ 314 (498)
T PRK08257 235 KLMNANDMVDQGAAVLLTSVAKARRLGVPEDRWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDA 314 (498)
T ss_pred HhhcCCCCcccceEEEEeeHHHHHhcCCCCCceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCE
Confidence 2222223689999999999999999873 2347899998887754322 2222 1234456899999999999999999
Q ss_pred EEecCCCCCCCcHHHHHHHHHH-hhcccCCCCcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Q 018323 243 VNAHATSTPLGDTVEATAIRTV-FSDHATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 319 (358)
Q Consensus 243 i~~h~~gt~~~d~~E~~a~~~~-~~~~~~~~~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~ 319 (358)
+|+|.+.+.. |...++.+ |+.+ ++.|++...+ .+||+.+++|+.+++++++||+.+
T Consensus 315 ~elydcF~~~----~~~~~E~LGl~~~---g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg~-------------- 373 (498)
T PRK08257 315 FDLYSCFPSA----VQVAARELGLDLD---DPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLRAN-------------- 373 (498)
T ss_pred EEeccCCHHH----HHHHHHHcCcCCC---CCCCcCCCcChhhcCCchhhHHHHHHHHHHHHHhhc--------------
Confidence 9999665554 65666555 4433 3578888888 569999999999999999999863
Q ss_pred CCCCCCccccCCCCCCcEEEeeccc-cccceeeeEeee
Q 018323 320 FNDNFMPLTASKDMPISAALSNSFG-FGGTNASLLFTK 356 (358)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~l~~~~g-~gG~~~~~il~~ 356 (358)
..+++|+++.| ++..++..|+++
T Consensus 374 --------------~~~~gLv~~~GG~~~~~~~~vl~~ 397 (498)
T PRK08257 374 --------------PGRRGLVTANGGYLTKHSVGVYST 397 (498)
T ss_pred --------------CCCEEEEECCCChhhceEEEEEeC
Confidence 13578887766 444455556665
|
|
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.2e-22 Score=178.04 Aligned_cols=244 Identities=21% Similarity=0.243 Sum_probs=166.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||++||+++++|| .++++|+++ ..+.+..|..|+..|
T Consensus 51 ~~s~la~~Aa~~AL~~Agi~~~dID-----lII~aT~tp--------------------------d~~~Ps~A~~vq~~L 99 (323)
T COG0332 51 TTSDLAVEAARKALEDAGISPDDID-----LIIVATSTP--------------------------DHLFPSTACLVQARL 99 (323)
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCc--------------------------ccCCChHHHHHHHHh
Confidence 4678999999999999999999998 889888762 233577899999999
Q ss_pred CCCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCc
Q 018323 93 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 171 (358)
Q Consensus 93 gl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g 171 (358)
|+++ +.|.+..+|++.++||..|..+|++|.++.+||+|.|.++.... |+.+...
T Consensus 100 G~~~~~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~~ld------------------------~~dR~t~ 155 (323)
T COG0332 100 GLGGAPAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSRILD------------------------WTDRDTC 155 (323)
T ss_pred CCCCcceeechhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHhhccCC------------------------Hhhccce
Confidence 9998 99999999999999999999999999999999999998532221 4455788
Q ss_pred eeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCC-----------------CC--CCCCC--------hHHHHH
Q 018323 172 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH-----------------IT--QPHID--------GKGAIL 224 (358)
Q Consensus 172 ~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~-----------------~~--~~~~~--------~~~~~~ 224 (358)
+.+||||+|+||+..+ .+.+ |......+|+.. .. ..... ...+..
T Consensus 156 vlFgDGAgAvvl~~~~--~~~~------i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~ 227 (323)
T COG0332 156 VLFGDGAGAVVLEATE--DDNG------ILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPK 227 (323)
T ss_pred EEEcCCceEEEEecCC--CCcC------eeeeeeeccccCCCeeeccCCCCccccccccccceeeccHHHHHHHHHHHHH
Confidence 9999999999999876 1111 111222122110 00 00001 133457
Q ss_pred HHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHh
Q 018323 225 AMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHH 304 (358)
Q Consensus 225 ~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~ 304 (358)
+++++|++++++++|||++..| +.+-.+ ..++.+.++-.. -.+...-.-+|++.+||=-+.|.++ +++
T Consensus 228 ~~~~~L~~~~l~~~dId~~vpH----Qan~ri-~~~i~~~l~~~~----~k~~~~~~~yGNtsaAsiplaL~~~---~~~ 295 (323)
T COG0332 228 AIEEVLEKAGLTPEDIDWFVPH----QANLRI-IEAIAKKLGIPE----EKVVVTVDKYGNTSAASIPLALDEA---LRE 295 (323)
T ss_pred HHHHHHHHcCCCHHHCCEEccc----cccHHH-HHHHHHHcCCCH----HHHhhHHHHhcccccchHHHHHHHH---hhh
Confidence 8899999999999999999999 332222 122222222110 1122233356777777655444443 344
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 305 GVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 305 ~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
|.+ ++....+...||-|=+-.+++++.
T Consensus 296 g~i-------------------------k~Gd~ill~~fG~Gltwg~~~~r~ 322 (323)
T COG0332 296 GRI-------------------------KPGDLVLLEAFGGGLTWGAALVRW 322 (323)
T ss_pred CCC-------------------------CCCCEEEEEeecCcceeeeEEEEe
Confidence 332 223667778888777777777764
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.3e-21 Score=176.16 Aligned_cols=248 Identities=19% Similarity=0.234 Sum_probs=169.3
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHH
Q 018323 12 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 91 (358)
Q Consensus 12 ~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 91 (358)
.....|+.+|+++||+++|+++++++ .+++++.++.. ..+..+.+|+..
T Consensus 50 ~~~~~la~~Aa~~aL~~ag~~~~dId-----~li~~~~~~~~--------------------------~~p~~a~~v~~~ 98 (329)
T PRK07204 50 ETSSYMGAEAAKKAVEDAKLTLDDID-----CIICASGTIQQ--------------------------AIPCTASLIQEQ 98 (329)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCCCCC--------------------------CCccHHHHHHHH
Confidence 34678999999999999999998887 77877754211 123567889999
Q ss_pred cCCCC---CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCC
Q 018323 92 YGFQG---PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 168 (358)
Q Consensus 92 lgl~g---p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~ 168 (358)
+|+++ |+++++.+|+|++.||..|.++|++|.++.+||+++|.+.... .++..
T Consensus 99 lgl~~~~~~~~~v~~~C~~~~~al~~a~~~l~~g~~~~~Lvv~~e~~s~~~------------------------~~~~~ 154 (329)
T PRK07204 99 LGLQHSGIPCFDINSTCLSFITALDTISYAIECGRYKRVLIISSEISSVGL------------------------NWGQN 154 (329)
T ss_pred hCCCCCCceEEEccchhHHHHHHHHHHHHHHHCCCCCEEEEEEeccccCCC------------------------CcccC
Confidence 99974 8899999999999999999999999999999999999742211 12233
Q ss_pred CCceeeecceEEEEeccHHHHHhcCCeee-------------EEEEeeeeecCCCCCCCCC-------CCh--------H
Q 018323 169 RDGFVIGEGSGVLVLEELEHAKKRGAKIY-------------AEVRGYGMSGDAHHITQPH-------IDG--------K 220 (358)
Q Consensus 169 ~~g~~~geGaaa~vL~~~~~A~~~g~~~~-------------a~i~g~~~~~~~~~~~~~~-------~~~--------~ 220 (358)
..++++||||+|+||++.+.. ..+. ..+.+.+...+......+. ..+ .
T Consensus 155 ~~~~lfGDGAaA~ll~~~~~~----~~il~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (329)
T PRK07204 155 ESCILFGDGAAAVVITKGDHS----SRILASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSK 230 (329)
T ss_pred cceEEEecccEEEEEEEcCCC----CcEEEEEEEEecCCCCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHH
Confidence 457889999999999975421 1111 1222221111100000000 011 1
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHH
Q 018323 221 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVL 300 (358)
Q Consensus 221 ~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~ 300 (358)
...++++++|+++|++++|||++.+|..+.+. ...+.+.++... . .+......+||+.+++=.+.+..+
T Consensus 231 ~~~~~i~~~L~~~gl~~~did~~~~H~~~~~~-----~~~i~~~l~l~~--e--~~~~~~~~~Gn~~sas~~~~L~~~-- 299 (329)
T PRK07204 231 YLMKFIDKLLMDAGYTLADIDLIVPHQASGPA-----MRLIRKKLGVDE--E--RFVTIFEDHGNMIAASIPVALFEA-- 299 (329)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHH-----HHHHHHHcCCCH--H--HhhhhHhhhCcHHHHHHHHHHHHH--
Confidence 24478899999999999999999999776554 334555554422 1 133455688998877655555544
Q ss_pred HHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 301 AIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 301 ~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
++.+.+ .+.+.++..+||.|-+..+++|+
T Consensus 300 -~~~g~~-------------------------~~Gd~vll~~~G~G~s~~~~ll~ 328 (329)
T PRK07204 300 -IKQKKV-------------------------QRGNKILLLGTSAGLSIGGILLE 328 (329)
T ss_pred -HHcCCC-------------------------CCCCEEEEEEEchhhhheeeEEe
Confidence 233321 23477888899999999999886
|
|
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.1e-20 Score=170.88 Aligned_cols=243 Identities=18% Similarity=0.179 Sum_probs=164.4
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHH
Q 018323 12 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 91 (358)
Q Consensus 12 ~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 91 (358)
....+|+.+|+++||+++|+++++++ .+++++..... ..+..+.+|+..
T Consensus 50 ~~~~~la~~A~~~al~~agl~~~~id-----~vi~~~~~~~~--------------------------~~~~~~~~i~~~ 98 (319)
T PRK09352 50 ETTSDLATEAAKKALEAAGIDPEDID-----LIIVATTTPDY--------------------------AFPSTACLVQAR 98 (319)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCCC--------------------------CCchHHHHHHHH
Confidence 34688999999999999999998887 78888754211 012346789999
Q ss_pred cCCCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCC
Q 018323 92 YGFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 170 (358)
Q Consensus 92 lgl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 170 (358)
+|+++ |.++++.+|+|++.||..|+++|++|.+|.+||+++|.+.... .++....
T Consensus 99 lG~~~~~~~~v~~~Casg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~------------------------~~~~~~~ 154 (319)
T PRK09352 99 LGAKNAAAFDLSAACSGFVYALSTADQFIRSGAYKNVLVIGAEKLSRIV------------------------DWTDRST 154 (319)
T ss_pred hCCCCCcEeeccccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhcccc------------------------CcccCCc
Confidence 99987 8999999999999999999999999999999999999843211 0112234
Q ss_pred ceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCC---CC-------CCC------CC--------hHHHHHHH
Q 018323 171 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH---IT-------QPH------ID--------GKGAILAM 226 (358)
Q Consensus 171 g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~---~~-------~~~------~~--------~~~~~~~~ 226 (358)
.+++||||+|+||++.+.. . +.++...+++.+ .. .+. .. .....+++
T Consensus 155 ~~~~gDGaaA~ll~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 225 (319)
T PRK09352 155 CVLFGDGAGAVVLGASEEP-----G----ILSTHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVA 225 (319)
T ss_pred eEEEeccceEEEEEEcCCC-----C----eEEEEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHH
Confidence 6789999999999986431 1 112222222110 00 000 00 12244688
Q ss_pred HHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCC
Q 018323 227 TRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 306 (358)
Q Consensus 227 ~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 306 (358)
+++|+++|++++||+++.+|..+.... ..+.+.++-.. .+ +......+||..+++-++.+..++ +.+.
T Consensus 226 ~~~l~~~g~~~~di~~~~~h~~~~~~~-----~~~~~~lg~~~--~~--~~~~~~~~Gn~~~a~~~~~L~~~~---~~g~ 293 (319)
T PRK09352 226 REALEAAGLTPEDIDWLVPHQANLRII-----DATAKKLGLPM--EK--VVVTVDKYGNTSAASIPLALDEAV---RDGR 293 (319)
T ss_pred HHHHHHcCCCHHHCCEEEECCCCHHHH-----HHHHHHhCCCH--HH--hhhhHHhhCCHHHHHHHHHHHHHH---HcCC
Confidence 999999999999999999995543321 22333333221 11 122345799998888777776554 2322
Q ss_pred CCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 307 APLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 307 ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
..+.+..++-++|.|-+-.+++|+
T Consensus 294 -------------------------~~~Gd~vll~s~G~G~~~~~~ll~ 317 (319)
T PRK09352 294 -------------------------IKRGDLVLLEGFGGGLTWGAALVR 317 (319)
T ss_pred -------------------------CCCCCEEEEEEEchhheeEEEEEE
Confidence 122466778899999988888876
|
|
| >KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.83 E-value=4e-20 Score=156.16 Aligned_cols=241 Identities=27% Similarity=0.395 Sum_probs=170.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
+..|...|++.||+.+++.++.+| .|++|+....-. -.-+++.+.|
T Consensus 28 aTdL~~~AakAAL~aa~v~~e~VD-----~VI~GNV~aSSs-----------------------------DgIYl~RHvG 73 (396)
T KOG1391|consen 28 ATDLGVVAAKAALKAANVGAEAVD-----HVIMGNVLASSS-----------------------------DGIYLARHVG 73 (396)
T ss_pred hhhHHHHHHHHHHhhcCCChhhcc-----eEEEeeeeeccC-----------------------------CceEeeeccc
Confidence 567888999999999999998887 666665321100 0113444455
Q ss_pred CC------CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhh---------------------
Q 018323 94 FQ------GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCK--------------------- 146 (358)
Q Consensus 94 l~------gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~--------------------- 146 (358)
|+ -|..+|+.-|.|+.+++..+++.|.-|+++++|++|+|.++..++....-+
T Consensus 74 L~~GvP~e~pALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFGT~LG~~y~lED~LW~sLtD 153 (396)
T KOG1391|consen 74 LRVGVPKETPALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFGTKLGSDYKLEDSLWVSLTD 153 (396)
T ss_pred cccCCcCccCceeehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeeeeeeccccccccchhhhHhhhccc
Confidence 43 278899999999999999999999999999999999998654432100000
Q ss_pred ----------hcccccccCC-------------------------------------------CCCCCCCC---------
Q 018323 147 ----------SRALTTKYNG-------------------------------------------TPQEASRP--------- 164 (358)
Q Consensus 147 ----------~~~l~~~~~~-------------------------------------------~~~~~~~p--------- 164 (358)
...|...|.. ..++..||
T Consensus 154 ~y~kLpMa~TAEnL~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~kkge~~f~vDEHpRp~TT~E~L~K 233 (396)
T KOG1391|consen 154 QYVKLPMAMTAENLAVQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTKKGEQTFQVDEHPRPQTTLEQLQK 233 (396)
T ss_pred hhhhcchhhhHHHhhhhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeeccCceeeEecCCCCccchHHHHhh
Confidence 0000000000 00111121
Q ss_pred ----CcCCCCcee-------eecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHc
Q 018323 165 ----FDCGRDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQS 233 (358)
Q Consensus 165 ----f~~~~~g~~-------~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~a 233 (358)
|. .+|.+ .+|||+|+|+.+++..++.+.+|+++|.+|.... +.|..++.+...+|+.+|+.+
T Consensus 234 LppvFk--KdG~VtAGnASGi~DGA~AvivAsEdavK~~NlkPLARiVays~vG-----cdP~IMGIGPvPAI~~vLKks 306 (396)
T KOG1391|consen 234 LPPVFK--KDGTVTAGNASGIADGAGAVIVASEDAVKKHNLKPLARIVAYSVVG-----CDPSIMGIGPVPAISGVLKKS 306 (396)
T ss_pred CCchhc--cCCeeeccccccccCCceeEEEechhHHhhcCCchhhhhheeeeec-----cChhhccccCcHHHHHHHHHc
Confidence 21 22322 7999999999999999999999999999998876 456666677778999999999
Q ss_pred CCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCc---ceecccCCcCCcccchhHHHHHHHHHHHHhC
Q 018323 234 GLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSL---AFSSTKGAIGHLLGAAGAVEAIFAVLAIHHG 305 (358)
Q Consensus 234 gl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~---~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~ 305 (358)
|+...|||.+|.+ |+++-+.+...+..+.++ .++.-.-.+|||+++||..-....++-|+.+
T Consensus 307 Glkl~DiDl~EvN----------EAFApQ~LAv~r~L~ld~sKlNVNGGAIALGHPLgaSGsRIt~HlVHEL~Rr 371 (396)
T KOG1391|consen 307 GLKLKDIDLVEVN----------EAFAPQYLAVERSLDLDISKLNVNGGAIALGHPLGASGSRITAHLVHELRRR 371 (396)
T ss_pred CCcccccceEEec----------hhhchHHHHHHHhhCCChhhccccCceeeccCccccCcchhhHHHHHHHHHc
Confidence 9999999999999 888877776555433322 2222222789999999999888888888763
|
|
| >KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.3e-20 Score=159.76 Aligned_cols=243 Identities=23% Similarity=0.375 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc-CC
Q 018323 16 AYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY-GF 94 (358)
Q Consensus 16 ~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l-gl 94 (358)
.|...+.+..+++-+++|..+. -+++|+...+.. .....|++..+ |+
T Consensus 63 eLl~~vl~a~ie~t~~dp~~ig-----di~vG~vL~pg~---------------------------ga~e~R~a~~~ag~ 110 (435)
T KOG1389|consen 63 ELLAAVLRAVIEKTNLDPSLIG-----DIVVGTVLAPGS---------------------------GASECRMAAFYAGF 110 (435)
T ss_pred HHHHHHHHHHHhhcCCCHHHhc-----ceeeeeccCCCc---------------------------chHHHHHHHHHcCC
Confidence 3555677888899999988775 577776542211 13344555443 66
Q ss_pred C--CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChH--HHH--------HHhh-------hcccc----
Q 018323 95 Q--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDAL--SMA--------GFCK-------SRALT---- 151 (358)
Q Consensus 95 ~--gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~--~~~--------~~~~-------~~~l~---- 151 (358)
. -|..+|+.-|+||++|+..-+..|++|.+|.-|.+|+|++.+.+ .+. .+.. ++..+
T Consensus 111 P~tvpv~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~GvESMt~~~~~g~~g~~~~~~~~~~~A~dCllpmGitsEnva 190 (435)
T KOG1389|consen 111 PETVPVRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAAGVESMTTNYPRGWPGSINPRLQKFEKARDCLLPMGITSENVA 190 (435)
T ss_pred CcccchhhhhhhhhhHHHHHHHHHHHHhcCceeeecccchhhhcccCCCCCccccChhhhhhhHHhhcccccccchHHHH
Confidence 5 38889999999999999999999999999999999999976553 110 0000 00000
Q ss_pred cccCC-------------------------------------CCC-----------CCCCC-------------CcCCC-
Q 018323 152 TKYNG-------------------------------------TPQ-----------EASRP-------------FDCGR- 169 (358)
Q Consensus 152 ~~~~~-------------------------------------~~~-----------~~~~p-------------f~~~~- 169 (358)
..++. ++. +..|| |.++.
T Consensus 191 ~rfgvsR~eqD~~Av~S~kkAa~A~~~G~f~dEIiPv~tkv~D~~g~~k~i~v~~DeGiRp~ttl~~l~klkpvFkkdGt 270 (435)
T KOG1389|consen 191 ERFGVSREEQDEAAVDSHKKAAAATAKGKFKDEIIPVKTKVVDPKGDEKPITVSVDEGIRPNTTLESLAKLKPVFKKDGT 270 (435)
T ss_pred HHhCCChhhhhHHHHHHHHHHHHHhhcCcchhheeeeeeeccCCcCCccceeEecCCCCCCCcchhHHhhcchhhhcCCc
Confidence 00000 011 11111 21111
Q ss_pred ----CceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEe
Q 018323 170 ----DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNA 245 (358)
Q Consensus 170 ----~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~ 245 (358)
+.--.+||+++++|.+...|.+.|.+++++.+.|.... ..|...+.+..-+|.++++.+|+..+|||++|+
T Consensus 271 tTagNsSQvSDGa~aVLLmkRs~A~qlgLPvlgvfr~f~~vG-----v~P~iMGiGPavAIp~alk~aGL~v~did~FEI 345 (435)
T KOG1389|consen 271 TTAGNSSQVSDGAGAVLLMKRSVAMQLGLPVLGVFRDFAAVG-----VPPAIMGIGPAVAIPKALKAAGLEVDDIDLFEI 345 (435)
T ss_pred cccCchhhcccchhhhhhhhhhhHhhcCCceeEEeeeeeeec-----CCHHHcCCCchhhhHHHHHHcCCcccccceeeh
Confidence 01118999999999999999999999999999988765 345556677788999999999999999999999
Q ss_pred cCCCCCCCcHHHHHHHHHHhhcccCCCCc-ceecccC--CcCCcccchhHHHHHHHHHHHHhC
Q 018323 246 HATSTPLGDTVEATAIRTVFSDHATSGSL-AFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHG 305 (358)
Q Consensus 246 h~~gt~~~d~~E~~a~~~~~~~~~~~~~~-~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~ 305 (358)
+ |+++-+.+|+.+....+. .++...+ .+|||+|++|+..++-.+.-|+++
T Consensus 346 N----------EAFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHPlGatGAR~VaTlL~emKrr 398 (435)
T KOG1389|consen 346 N----------EAFASQALYCRNKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRR 398 (435)
T ss_pred h----------HHHHHHHHHHHHHhCCCHHHcCCCCceeeccCCcCCccHhHHHHHHHHHHhh
Confidence 9 999999999875433222 2444444 789999999999999999998764
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.7e-18 Score=161.84 Aligned_cols=242 Identities=17% Similarity=0.177 Sum_probs=155.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+++|+++++|+ .+++++..+++ ..+..+..|...+
T Consensus 62 ~~~~La~~A~~~aL~~agi~~~dId-----~li~~s~~~~~--------------------------~~p~~a~~v~~~L 110 (378)
T PRK06816 62 SNAQMAAEAIRDLLDDAGFSLGDIE-----LLACGTSQPDQ--------------------------LMPGHASMVHGEL 110 (378)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEECCCCc--------------------------CChHHHHHHHhhC
Confidence 4578999999999999999998887 78888754221 1123456889999
Q ss_pred CCCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhh-hcccccccCCCCCCCCCCCcCCCC
Q 018323 93 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCK-SRALTTKYNGTPQEASRPFDCGRD 170 (358)
Q Consensus 93 gl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~pf~~~~~ 170 (358)
|+++ +.+.++.+|+|++.||..|.++|++|.++.+||+++|.++.......+.. .+.+.. .+...+++|+....
T Consensus 111 gl~~~~~~~v~~~Cas~~~al~~A~~~i~sg~~~~vLvv~~E~~s~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 186 (378)
T PRK06816 111 GAPPIEVVSSAGVCAAGMMALKYAYLSVKAGESRNAVATASELASRWFRASRFEAEEEKLAE----LEENPEIAFEKDFL 186 (378)
T ss_pred CCCCCceeeecCcCHHHHHHHHHHHHHHHCCCCCEEEEEeEccchhhhhhhhhhhHHHHhhc----CcccCCCCCCCCCC
Confidence 9976 88999999999999999999999999999999999998765544322221 222221 12345789999999
Q ss_pred ceeeecceEEEEeccHHHHHhcCCeeeE-EE--Eeeeeec-----CC-C-C-------CC--CCC-----------CChH
Q 018323 171 GFVIGEGSGVLVLEELEHAKKRGAKIYA-EV--RGYGMSG-----DA-H-H-------IT--QPH-----------IDGK 220 (358)
Q Consensus 171 g~~~geGaaa~vL~~~~~A~~~g~~~~a-~i--~g~~~~~-----~~-~-~-------~~--~~~-----------~~~~ 220 (358)
++++||||+|+||++.+.. .|..... .+ ....... .+ . . .. .+. ....
T Consensus 187 ~~~fGDGA~A~vl~~~~~~--~g~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (378)
T PRK06816 187 RWMLSDGAGAVLLENKPRP--DGLSLRIDWIDLRSYAGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDVR 264 (378)
T ss_pred CEeeecccEEEEEEecCCC--CCceEEEEEEeeecccccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHHH
Confidence 9999999999999865431 1211100 00 0000000 00 0 0 00 000 0111
Q ss_pred --------HHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhc---ccCCCCcceecccCCcCCcccc
Q 018323 221 --------GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSD---HATSGSLAFSSTKGAIGHLLGA 289 (358)
Q Consensus 221 --------~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~---~~~~~~~~v~~~k~~~Gh~~~a 289 (358)
.....++++|+++|++++|||++..|-...... ..+.+.+.. .....+.+ ..-.-+||+.+|
T Consensus 265 ~~~~~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~n~~~~-----~~v~~~l~~~~~gl~~~k~~--~~~~~~GNt~sA 337 (378)
T PRK06816 265 LLNENIVVYTIKPLLELVDKRNLDPDDIDYFLPHYSSEYFR-----EKIVELLAKAGFMIPEEKWF--TNLATVGNTGSA 337 (378)
T ss_pred HHHHHhHHHHHHHHHHHHHHcCCChhhCCEEeeCcccHHHH-----HHHHHHHHhccCCCChhheE--Eeccccccccch
Confidence 125677889999999999999999994433322 222222210 00001122 233488999998
Q ss_pred hhHHHHHHH
Q 018323 290 AGAVEAIFA 298 (358)
Q Consensus 290 sG~~~l~~~ 298 (358)
+-.+.|..+
T Consensus 338 sipi~L~~a 346 (378)
T PRK06816 338 SIYIMLDEL 346 (378)
T ss_pred HHHHHHHHH
Confidence 877776555
|
|
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.7e-19 Score=163.19 Aligned_cols=247 Identities=19% Similarity=0.206 Sum_probs=163.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+++|+++++++ .+++++...+ ...+..+.+|+..+
T Consensus 52 ~~~~la~~A~~~al~~ag~~~~~Id-----~li~~~~~~~--------------------------~~~~~~a~~l~~~l 100 (325)
T PRK12879 52 YTSDLAIKAAERALARAGLDAEDID-----LIIVATTTPD--------------------------YLFPSTASQVQARL 100 (325)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCC--------------------------CCCChHHHHHHHHh
Confidence 3678999999999999999998887 7887765421 11234567899999
Q ss_pred CCCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCc
Q 018323 93 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 171 (358)
Q Consensus 93 gl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g 171 (358)
|++. +.+.++.+|++++.||..|.++|++|.++.+||+++|.+.... .++.....
T Consensus 101 g~~~~~~~~v~~~C~~~~~al~~A~~~l~~g~~~~~Lvv~~e~~s~~~------------------------~~~~~~~~ 156 (325)
T PRK12879 101 GIPNAAAFDINAACAGFLYGLETANGLITSGLYKKVLVIGAERLSKVT------------------------DYTDRTTC 156 (325)
T ss_pred CCCCCcEEEECccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcC------------------------CccccCce
Confidence 9985 8899999999999999999999999999999999999742211 01112345
Q ss_pred eeeecceEEEEeccHHHHHhcCCeeeEE-------------EEeeeeecCC---CCCCCCCCCh--------HHHHHHHH
Q 018323 172 FVIGEGSGVLVLEELEHAKKRGAKIYAE-------------VRGYGMSGDA---HHITQPHIDG--------KGAILAMT 227 (358)
Q Consensus 172 ~~~geGaaa~vL~~~~~A~~~g~~~~a~-------------i~g~~~~~~~---~~~~~~~~~~--------~~~~~~~~ 227 (358)
+++||||+|+||++.+.. ..+... +.+.+...+. .........+ ....++++
T Consensus 157 ~~~GDgAaA~ll~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 232 (325)
T PRK12879 157 ILFGDGAGAVVLEATENE----PGFIDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGAR 232 (325)
T ss_pred EEEeecceEEEEEecCCC----CCeEEEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHH
Confidence 789999999999975431 111111 1111100000 0000000011 12346788
Q ss_pred HHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCC
Q 018323 228 RALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVA 307 (358)
Q Consensus 228 ~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~i 307 (358)
++|+++|++++|||++.+|..+... ...+.+.++-.. .++.. ....+||+.+++-.+.+..++ +.+.+
T Consensus 233 ~~L~~~g~~~~did~~~~h~~~~~~-----~~~~~~~lg~~~--~~~~~--~~~~~Gn~~sas~~~~L~~~~---~~g~~ 300 (325)
T PRK12879 233 QVLEKAGLTKDDIDWVIPHQANLRI-----IESLCEKLGIPM--EKTLV--SVEYYGNTSAATIPLALDLAL---EQGKI 300 (325)
T ss_pred HHHHHcCCCHHHCCEEEECCCCHHH-----HHHHHHHcCCCH--HHhhh--hHhhhCchHHHHHHHHHHHHH---HcCCC
Confidence 9999999999999999999544222 234444444321 11222 346899999887766665443 33321
Q ss_pred CCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 308 PLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 308 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
.+.+..+.-+||.|-+..++|++
T Consensus 301 -------------------------~~Gd~vll~~~G~G~~~~~~l~~ 323 (325)
T PRK12879 301 -------------------------KPGDTLLLYGFGAGLTWAALLVK 323 (325)
T ss_pred -------------------------CCCCEEEEEEEchhhhhEEEEEE
Confidence 22466788899999988888876
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=99.82 E-value=5e-19 Score=163.54 Aligned_cols=243 Identities=18% Similarity=0.193 Sum_probs=163.5
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+++|+++++++ .+++++...+. ..+..+.+++..+
T Consensus 50 ~~~~la~~A~~~al~~agl~~~~Id-----~~i~~~~~~~~--------------------------~~~~~a~~l~~~l 98 (318)
T TIGR00747 50 TSSTMGFEAAKRAIENAGISKDDID-----LIIVATTTPDH--------------------------AFPSAACMVQAYL 98 (318)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCCCCC--------------------------CCChHHHHHHHHh
Confidence 3578999999999999999998887 78887654211 1123467899999
Q ss_pred CCCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCc
Q 018323 93 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 171 (358)
Q Consensus 93 gl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g 171 (358)
|+++ |.+++..+|++++.||..|+++|++|.++.+||+++|...... . +......
T Consensus 99 Gl~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~~~-----------------------~-~~~~~~~ 154 (318)
T TIGR00747 99 GIKGIPAFDLSAACAGFIYALSVAKQYIESGKYKTVLVVGAEKLSSTL-----------------------D-WTDRGTC 154 (318)
T ss_pred CCCCCcEeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcC-----------------------C-cCCCCeE
Confidence 9998 8999999999999999999999999999999999999843221 0 1112345
Q ss_pred eeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCC---CCCCC-------CC--------------ChHHHHHHHH
Q 018323 172 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH---HITQP-------HI--------------DGKGAILAMT 227 (358)
Q Consensus 172 ~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~---~~~~~-------~~--------------~~~~~~~~~~ 227 (358)
+.+||||+|+||++.+... . |......+++. ....| .. ......++++
T Consensus 155 ~~~GDGAaA~lL~~~~~~~----~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (318)
T TIGR00747 155 VLFGDGAGAVVLGESEDPG----G----IISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVE 226 (318)
T ss_pred EEEecceeEEEEeecCCCC----c----EEEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHH
Confidence 7899999999998754321 1 22222222211 00000 00 0122346788
Q ss_pred HHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCC
Q 018323 228 RALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVA 307 (358)
Q Consensus 228 ~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~i 307 (358)
++|+++|++++||+++.+|..+.+.. ..+.+.++-.. .++. .+ -..+||+.+++-.+.|..++ +++.+
T Consensus 227 ~~l~~~g~~~~di~~~~~h~~~~~~~-----~~~~~~lgi~~--~k~~-~~-~~~~Gn~~sas~~~~L~~~~---~~~~~ 294 (318)
T TIGR00747 227 ETLEANGLDPEDIDWFVPHQANLRII-----EALAKRLELDM--SQVV-KT-VHKYGNTSAASIPLALDELL---RTGRI 294 (318)
T ss_pred HHHHHcCCCHHHCCEEEECCCCHHHH-----HHHHHHcCCCH--HHee-eh-HhhhCCHHHHHHHHHHHHHH---HcCCC
Confidence 89999999999999999996654432 22333343321 1122 22 23589999888777765544 23221
Q ss_pred CCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 308 PLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 308 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
.+.+.++.-++|.|.+..+++|+
T Consensus 295 -------------------------~~Gd~vll~~~G~G~t~~~~~l~ 317 (318)
T TIGR00747 295 -------------------------KPGDLLLLVAFGGGLTWGAALVR 317 (318)
T ss_pred -------------------------CCCCEEEEEEEehhheeeEEEEE
Confidence 12366778899999998888886
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.1e-19 Score=165.05 Aligned_cols=241 Identities=20% Similarity=0.225 Sum_probs=163.2
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+++|+++++++ .+++++..... ..+..+.+|+..+
T Consensus 49 ~~~~la~~A~~~al~~ag~~~~~Id-----~li~~~~~~~~--------------------------~~~~~~~~l~~~l 97 (320)
T cd00830 49 TTSDLAVEAAKKALEDAGIDADDID-----LIIVATSTPDY--------------------------LFPATACLVQARL 97 (320)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCCC--------------------------CCCcHHHHHHHHh
Confidence 4678999999999999999998887 78887654211 1134567899999
Q ss_pred CCC-CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCc
Q 018323 93 GFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 171 (358)
Q Consensus 93 gl~-gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g 171 (358)
|++ .+.+.++.+|++++.||..|.++|++|.++.+||+++|.+.... .|+....+
T Consensus 98 g~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~------------------------~~~~~~~~ 153 (320)
T cd00830 98 GAKNAAAFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRIL------------------------DWTDRSTA 153 (320)
T ss_pred CCCCCcEeeccccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcccc------------------------CcccCCce
Confidence 995 48899999999999999999999999999999999999843211 03334567
Q ss_pred eeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCC-----CCC-----C-----------CCC--------hHHH
Q 018323 172 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH-----ITQ-----P-----------HID--------GKGA 222 (358)
Q Consensus 172 ~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~-----~~~-----~-----------~~~--------~~~~ 222 (358)
+++||||+|+||++.+. +.. |.+....+++.. ... | ... ....
T Consensus 154 ~~~GDgAaA~ll~~~~~----~~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (320)
T cd00830 154 VLFGDGAGAVVLEATEE----DPG----ILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLM 225 (320)
T ss_pred EEEeccceEEEEEecCC----CCc----EEEEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhh
Confidence 89999999999997543 112 233332222211 000 0 000 1223
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHH
Q 018323 223 ILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAI 302 (358)
Q Consensus 223 ~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l 302 (358)
.++++++|+++|++++|||++.+|..+....+ .+.+.++-.. .++ ...-..+||+.+++-.+.|..++
T Consensus 226 ~~~i~~~l~~~g~~~~di~~~~~h~~~~~~~~-----~~~~~lgl~~--~~~--~~~~~~~Gn~~sas~~~~L~~~~--- 293 (320)
T cd00830 226 PESIEEALEKAGLTPDDIDWFVPHQANLRIIE-----AVAKRLGLPE--EKV--VVNLDRYGNTSAASIPLALDEAI--- 293 (320)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEECCCCHHHHH-----HHHHHhCCCH--HHh--hhhHHhhCcHHHHHHHHHHHHHH---
Confidence 57889999999999999999999966544422 2333343321 112 22344789999888777776554
Q ss_pred HhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeE
Q 018323 303 HHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLL 353 (358)
Q Consensus 303 ~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~i 353 (358)
+.+.+ .+...++..++|.|-+..+++
T Consensus 294 ~~~~~-------------------------~~G~~vll~~~G~G~~~~~~l 319 (320)
T cd00830 294 EEGKL-------------------------KKGDLVLLLGFGAGLTWGAAL 319 (320)
T ss_pred HcCCC-------------------------CCCCEEEEEEEchHHhhHHhh
Confidence 33221 224667777888877665554
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.2e-18 Score=160.55 Aligned_cols=260 Identities=22% Similarity=0.205 Sum_probs=170.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+++|+++++++ .+++++...+ ...+..+.+|+..+|
T Consensus 61 ~~~la~~Aa~~aL~~ag~~~~~Id-----~li~~s~~~~--------------------------~~~p~~a~~v~~~lg 109 (338)
T PRK09258 61 LSDGAIAAGRKALAEAGIDPSDIG-----LLINTSVCRD--------------------------YLEPATACRVHHNLG 109 (338)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCC--------------------------CCCChHHHHHHHHcC
Confidence 568999999999999999998887 7878775321 122356788999999
Q ss_pred CCC--CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCc
Q 018323 94 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 171 (358)
Q Consensus 94 l~g--p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g 171 (358)
++. +.+.|..+|+|++.||..|.++|++|.++.+||+++|....... ..+.. ... +.....+|+.....
T Consensus 110 l~~~~~~~~v~~~C~~~~~al~~A~~~i~~g~~~~~Lvv~~e~~s~~~~-~~~~~--~~~------~~~~~~~~~~~~~~ 180 (338)
T PRK09258 110 LPKSCANFDVSNACLGFLNGMLDAANMIELGQIDYALVVSGESAREIVE-ATIDR--LLA------PETTREDFAQSFAT 180 (338)
T ss_pred CCCCCceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEecccchhcc-chhhh--hcc------Cccchhhhhhccce
Confidence 973 78999999999999999999999999999999999998533221 11100 000 11112456666778
Q ss_pred eeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCC--CCCC-----CCh--------HHHHHHHHHHHHHcCCC
Q 018323 172 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHI--TQPH-----IDG--------KGAILAMTRALKQSGLQ 236 (358)
Q Consensus 172 ~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~--~~~~-----~~~--------~~~~~~~~~al~~agl~ 236 (358)
+.+||||+|+||++.+.. ..+ ..+.+....+++.+. .... .+. ....++++++|+++|++
T Consensus 181 ~~~GDGA~A~ll~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~ 255 (338)
T PRK09258 181 LTLGSGAAAAVLTRGSLH-PRG----HRLLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWA 255 (338)
T ss_pred EEecccceEEEEecCCCC-CCc----ceeeeeeeecCCCcccccccCccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 899999999999975421 111 123333333332221 1100 111 22345788999999999
Q ss_pred CCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCC
Q 018323 237 SHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKP 316 (358)
Q Consensus 237 ~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~ 316 (358)
++|||++.+|..+.+..+ .+.+.++-.. .+++. +. ..+||+.+++=.+.|..++ +.+.+
T Consensus 256 ~~did~~i~H~~~~~~~~-----~~~~~lgl~~--~k~~~-~~-~~~GN~~sas~~~~L~~~~---~~g~~--------- 314 (338)
T PRK09258 256 VEQVDRVICHQVGAAHTR-----AILKALGIDP--EKVFT-TF-PTLGNMGPASLPITLAMAA---EEGFL--------- 314 (338)
T ss_pred HHHCCEEecCCCCHHHHH-----HHHHHhCCCH--HHcee-hH-hhhCCcHHhHHHHHHHHHH---HhCCC---------
Confidence 999999999965544433 3344443321 12222 22 3699999887666665543 33221
Q ss_pred CCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 317 DPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
.+.+.++..+||.|-+...++++
T Consensus 315 ----------------~~Gd~vll~~~G~G~s~~~~~~~ 337 (338)
T PRK09258 315 ----------------KPGDRVALLGIGSGLNCSMLEVK 337 (338)
T ss_pred ----------------CCCCEEEEEEechhHhhHhHeee
Confidence 22467888899988877766664
|
|
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-17 Score=157.43 Aligned_cols=243 Identities=19% Similarity=0.235 Sum_probs=159.5
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
+...|+.+|+++||+++|+++++++ .+++++..+.. . . ..+..|+..|
T Consensus 95 ~~~~La~~Aa~~aL~~agi~~~dId-----~li~~s~~~~~----------------------~----~-~~a~~v~~~L 142 (379)
T PLN02326 95 TLTSLAVEAAKKALEMAGVDPEDVD-----LVLLCTSSPDD----------------------L----F-GSAPQVQAAL 142 (379)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCCc----------------------c----C-cHHHHHHHHh
Confidence 4678999999999999999998887 77777654211 0 0 1355799999
Q ss_pred CCCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCc
Q 018323 93 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 171 (358)
Q Consensus 93 gl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g 171 (358)
|+++ +++.++.+|++++.||..|.++|++|.++.+||++.|.+.... .|+.....
T Consensus 143 G~~~~~~~dv~~~Ca~~~~aL~~A~~~l~~g~~~~vLVv~~e~~s~~~------------------------~~~d~~~~ 198 (379)
T PLN02326 143 GCTNALAFDLTAACSGFVLGLVTAARFIRGGGYKNVLVIGADALSRYV------------------------DWTDRGTC 198 (379)
T ss_pred CCCCCceeeccccchHHHHHHHHHHHHHHcCCCCEEEEEEechhcCCC------------------------CccccCce
Confidence 9976 7899999999999999999999999999999999999742111 02223456
Q ss_pred eeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCC-----------------------CCCCC---------CCCh
Q 018323 172 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH-----------------------HITQP---------HIDG 219 (358)
Q Consensus 172 ~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~-----------------------~~~~~---------~~~~ 219 (358)
+++||||+|+||++.+... ..+ .++...+++. ....+ ...+
T Consensus 199 ~lfGDGAaAvlL~~~~~~~---~~i----~~~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 271 (379)
T PLN02326 199 ILFGDGAGAVVLQACDDDE---DGL----LGFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNG 271 (379)
T ss_pred EEEcceeEEEEEEEcCCCC---Cce----EEEEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecC
Confidence 7899999999999754221 011 1111111100 00000 0001
Q ss_pred --------HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchh
Q 018323 220 --------KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAG 291 (358)
Q Consensus 220 --------~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG 291 (358)
....++++++|+++|++++|||++..|-.+.. + ...+.+.++-.. .+++ .+ -..+||+.+|+=
T Consensus 272 ~~v~~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~----~-~~~~~~~Lgl~~--ek~~-~~-l~~~GNt~sAsi 342 (379)
T PLN02326 272 KEVFKFAVRCVPQVIESALQKAGLTAESIDWLLLHQANQR----I-IDAVAQRLGIPP--EKVI-SN-LANYGNTSAASI 342 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHH----H-HHHHHHHcCCCH--HHee-ec-HhhcCcHHHHHH
Confidence 11235788899999999999999999944322 2 222344443321 1222 22 257899888876
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 292 AVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 292 ~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
.+.|.+++ +.+. ..+.+.++..+||.|-+..+++++
T Consensus 343 ~~~L~~~~---~~g~-------------------------~~~Gd~vll~~~G~G~t~~~~ll~ 378 (379)
T PLN02326 343 PLALDEAV---RSGK-------------------------VKKGDVIATAGFGAGLTWGSAIVR 378 (379)
T ss_pred HHHHHHHH---HcCC-------------------------CCCCCEEEEEEEChhheeeEEEEE
Confidence 66555443 3322 123477888899999888888875
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=5e-17 Score=150.55 Aligned_cols=241 Identities=16% Similarity=0.208 Sum_probs=158.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+++|+++++++ .++++++.... .. ..+..++..+
T Consensus 50 ~~~~la~~A~~~aL~~ag~~~~dId-----~vi~~s~~~~~----------------------~~-----~~~~~v~~~L 97 (326)
T CHL00203 50 SLTKLAAEAANKALDKAHMDPLEID-----LIILATSTPDD----------------------LF-----GSASQLQAEI 97 (326)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCCC----------------------CC-----chHHHHHHHh
Confidence 3578999999999999999998887 78888654211 00 1235788999
Q ss_pred CCCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCc
Q 018323 93 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 171 (358)
Q Consensus 93 gl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g 171 (358)
|+++ +++.+..+|+|++.||..|.++|++|.++.+||+++|.++... +++.....
T Consensus 98 g~~~~~~~~v~~~Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~~~------------------------~~~~~~~~ 153 (326)
T CHL00203 98 GATRAVAFDITAACSGFILALVTATQFIQNGSYKNILVVGADTLSKWI------------------------DWSDRKTC 153 (326)
T ss_pred CCCCCceeeecccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhhCcC------------------------CcccCCce
Confidence 9986 7899999999999999999999999999999999999842211 12222356
Q ss_pred eeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCC------------------CCCCC-------CC-----h--
Q 018323 172 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH------------------ITQPH-------ID-----G-- 219 (358)
Q Consensus 172 ~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~------------------~~~~~-------~~-----~-- 219 (358)
+++||||+|+||++.+. . .+ .+....+++.. ...|. .. .
T Consensus 154 ~~fgDga~A~ll~~~~~---~--~~----~~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 224 (326)
T CHL00203 154 ILFGDGAGAAIIGASYE---N--SI----LGFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFA 224 (326)
T ss_pred EEEcceeeEEEEEEcCC---C--Ce----EEEEEEEcCCCcceEEecCCCCCcccccccccccCCcceEEECCHHHHHHH
Confidence 88999999999986432 1 11 11111111100 00010 00 1
Q ss_pred -HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHH
Q 018323 220 -KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 298 (358)
Q Consensus 220 -~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~ 298 (358)
....++++++|+++|++++|||++.+|-.+... ..++.+.++-.. .+++ ..-..+||+.+++=.+.|.++
T Consensus 225 ~~~~~~~i~~~L~~~g~~~~did~~~~hq~~~~~-----~~~~~~~lgl~~--~k~~--~~l~~~Gn~~sasi~~~L~~~ 295 (326)
T CHL00203 225 VFQVPAVIIKCLNALNISIDEVDWFILHQANKRI-----LEAIANRLSVPN--SKMI--TNLEKYGNTSAASIPLALDEA 295 (326)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH-----HHHHHHHhCCCH--HHhh--hHHHhhCcHHHHHHHHHHHHH
Confidence 123356889999999999999999999544332 333444444321 1122 233578998877655555444
Q ss_pred HHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 299 VLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 299 ~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
++.+.+ .+.+..+.-+||.|=+-.+++++
T Consensus 296 ---~~~g~~-------------------------~~Gd~vll~~~G~G~s~~~~v~~ 324 (326)
T CHL00203 296 ---IQNNKI-------------------------QPGQIIVLSGFGAGLTWGAIVLK 324 (326)
T ss_pred ---HHhCCC-------------------------CCCCEEEEEEEchhhhheEEEEE
Confidence 344332 22467777888888877777765
|
|
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.5e-17 Score=151.17 Aligned_cols=244 Identities=16% Similarity=0.144 Sum_probs=156.7
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHH
Q 018323 12 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 91 (358)
Q Consensus 12 ~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 91 (358)
.....|+.+|+++||+++|+++++++ .+++.++.. +....+..+.+|+..
T Consensus 51 ~~~~~la~~Aa~~aL~~ag~~~~dId-----~li~~~~~~-------------------------~~~~~p~~a~~l~~~ 100 (339)
T PRK06840 51 DHTSDMAIAAAKPALKQAGVDPAAID-----VVIYIGSEH-------------------------KDYPVWSSAPKIQHE 100 (339)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEeccCC-------------------------CCCCCCchHHHHHHH
Confidence 34678999999999999999998887 666544321 111122346789999
Q ss_pred cCCCC-CceeccCCchhHHHHHHHHHHHHHc-CCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCC
Q 018323 92 YGFQG-PNHAAVTACATGAHSIGDAARMIQF-GDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 169 (358)
Q Consensus 92 lgl~g-p~~~v~~~cas~~~Al~~A~~~I~~-G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 169 (358)
+|++. +.+.+..+|++++.||..|.++|++ |.++.+||++.|...... .|+...
T Consensus 101 lGl~~~~~~~v~~~C~~~~~al~~A~~~l~~~g~~~~~Lvv~~~~~s~~~------------------------~~~~~~ 156 (339)
T PRK06840 101 IGAKNAWAFDIMAVCASFPIALKVAKDLLYSDPSIENVLLVGGYRNSDLV------------------------DYDNPR 156 (339)
T ss_pred hCCCCcccccccccchHHHHHHHHHHHHHhcCCCccEEEEEeeccccccc------------------------CcCCCC
Confidence 99976 8888999999999999999999999 999999999988632111 011112
Q ss_pred Cce--eeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCC-------------CCCCC-------------CC---
Q 018323 170 DGF--VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH-------------ITQPH-------------ID--- 218 (358)
Q Consensus 170 ~g~--~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~-------------~~~~~-------------~~--- 218 (358)
..+ .+||||+|+||++.+. +.. |.+....+++.. ...+. +.
T Consensus 157 ~~~~~~~GDgAaA~ll~~~~~----~~~----il~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (339)
T PRK06840 157 TRFMFNFAAGGSAALLKKDAG----KNR----ILGSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMK 228 (339)
T ss_pred eeeeccCCCceeEEEEEecCC----CCc----eEEEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHH
Confidence 232 3699999999986432 112 222222221100 00000 00
Q ss_pred -------hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchh
Q 018323 219 -------GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAG 291 (358)
Q Consensus 219 -------~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG 291 (358)
.....++++++|+++|++++|||++.+|-.+... ...+.+.++-.. .+.. ....+||+.+++-
T Consensus 229 ~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~h~~~~~~-----~~~~~~~Lgl~~--~~~~---~~~~~Gn~~sas~ 298 (339)
T PRK06840 229 ERLDEVSIPNFLKVIREALRKSGYTPKDIDYLAILHMKRSA-----HIALLEGLGLTE--EQAI---YLDEYGHLGQLDQ 298 (339)
T ss_pred HHhHhhHHHHHHHHHHHHHHHcCCCHHHCCEEEECCcCHHH-----HHHHHHHcCCCH--HHeE---eHHhccchhhhhH
Confidence 0124478899999999999999999888332221 223333333221 1111 2457899888876
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 292 AVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 292 ~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
.+.|..++ +.+. ..+....+..+||.|.+..+++|+
T Consensus 299 ~~~L~~~~---~~~~-------------------------~~~Gd~ill~~~G~G~s~~~~~l~ 334 (339)
T PRK06840 299 ILSLHLAL---EQGK-------------------------LKDGDLVVLVSAGTGYTWAATVIR 334 (339)
T ss_pred HHHHHHHH---HcCC-------------------------CCCCCEEEEEEEehhhheeEEEEE
Confidence 66655443 3322 123467888899999998888886
|
|
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.7e-17 Score=151.52 Aligned_cols=243 Identities=16% Similarity=0.132 Sum_probs=155.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+++|+++++++ .+++++++++ ...+..+.+|+..|
T Consensus 51 ~~~~la~~Aa~~aL~~ag~~~~~Id-----~li~~t~~~d--------------------------~~~p~~a~~v~~~L 99 (326)
T PRK05963 51 TLSDLAASAGDMALSDAGIERSDIA-----LTLLATSTPD--------------------------HLLPPSAPLLAHRL 99 (326)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCCCC--------------------------CCCCcHHHHHHHHh
Confidence 4568999999999999999998887 7888776422 22244567899999
Q ss_pred CCCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCc
Q 018323 93 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 171 (358)
Q Consensus 93 gl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g 171 (358)
|++. +++.+..+|++++.||..|..+|+++. +.+||+++|.+... +. .+.....
T Consensus 100 g~~~~~~~di~~~C~g~~~aL~~A~~~l~~~~-~~aLVv~~d~~s~~-----------~~-------------~~~~~~~ 154 (326)
T PRK05963 100 GLQNSGAIDLAGACAGFLYALVLADGFVRAQG-KPVLVVAANILSRR-----------IN-------------MAERASA 154 (326)
T ss_pred CCCCCceeeccchhhHHHHHHHHHHHHHHcCC-CeEEEEEechhhcc-----------CC-------------ccccCce
Confidence 9976 889999999999999999999999984 89999999873211 00 1122357
Q ss_pred eeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCC----------CCCC--------C-----CC--------hH
Q 018323 172 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH----------ITQP--------H-----ID--------GK 220 (358)
Q Consensus 172 ~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~----------~~~~--------~-----~~--------~~ 220 (358)
+++||||+|+||++.+... ..+ .+....+++.. ...| . .. ..
T Consensus 155 ~lfGDgA~A~ll~~~~~~~---~~~----l~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (326)
T PRK05963 155 VLFADAAGAVVLAPSAKAN---SGV----LGSQLISDGSHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVR 227 (326)
T ss_pred EEEeecceEEEEEecCCCC---Cce----EEEEEEEcCCCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHH
Confidence 8899999999998644210 111 11111111100 0000 0 00 12
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHH
Q 018323 221 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVL 300 (358)
Q Consensus 221 ~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~ 300 (358)
...++++++|+++|++++|||++.+|-.+.. + ...+.+.++-.. .++ ...-..+||+.+|+=.+.+-++
T Consensus 228 ~~~~~~~~~L~~~gl~~~did~~~~h~~~~~----~-~~~~~~~l~l~~--~k~--~~~l~~~Gn~~sas~~~~L~~~-- 296 (326)
T PRK05963 228 MMSGASQNVLASAAMTPQDIDRFFPHQANAR----I-VDKVCETIGIPR--AKA--ASTLETYGNSSAATIPLSLSLA-- 296 (326)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeCCCCHH----H-HHHHHHHcCCCH--HHh--hhhHHhhCcHHHHHHHHHHHHH--
Confidence 2346788899999999999999999943322 1 222333332211 111 1222578898666544444322
Q ss_pred HHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 301 AIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 301 ~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
++.+. ..+.+.++..+||.|-+-.++||+
T Consensus 297 -~~~~~-------------------------~~~Gd~vll~~~G~G~~~~~~ll~ 325 (326)
T PRK05963 297 -NLEQP-------------------------LREGERLLFAAAGAGMTGGAVVMR 325 (326)
T ss_pred -HHhCC-------------------------CCCCCEEEEEEEehhhhheeeEEe
Confidence 22222 123477888899999988888875
|
|
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.6e-18 Score=158.62 Aligned_cols=249 Identities=27% Similarity=0.348 Sum_probs=155.3
Q ss_pred HHHHHHHHHHHHHHHHCCCC--CCCCCCCCcE-EEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHH
Q 018323 13 RFIAYALCAADEALHDAKWL--PSDQGQKERT-GVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVS 89 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~--~~~~~~~~~~-gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia 89 (358)
....+..++...++.|++++ +++++ ...+ .+++|+.... +......+..++
T Consensus 21 s~~~l~~e~l~~a~~~a~~~~~~~~vd-~~~v~~~~~G~~~~~-------------------------g~~~~~~ar~~a 74 (392)
T COG0183 21 SLAELAAEALGAALIDAGLERAPADVD-AADVDDVILGCVLQA-------------------------GEQGQNIARQAA 74 (392)
T ss_pred chhhcCHHHHHHHHHHHHhhhccccCC-HHHhhhheecccccc-------------------------ccccccHHHHHH
Confidence 34567778888888888873 22343 2212 4666653311 111234566788
Q ss_pred HHcCCCC--CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHH-HHH-----------hh---------
Q 018323 90 MKYGFQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM-AGF-----------CK--------- 146 (358)
Q Consensus 90 ~~lgl~g--p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~-~~~-----------~~--------- 146 (358)
...|+.. |.++|+.+|+||+.|+..|++.|++|.+|++|++|+|++++.+.. ... ..
T Consensus 75 ~~aGl~~~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 154 (392)
T COG0183 75 LAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAPMGREGVRVLDSAVDPMFEDPLGDATPGY 154 (392)
T ss_pred HHcCCCCCCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCCCccccchhhhhhhhhhccccccccccchh
Confidence 8999985 999999999999999999999999999999999999997766530 000 00
Q ss_pred -----hcccccccCC----------------------------CCCCC-CCCCcC----CCCceeeecceEEEEecc---
Q 018323 147 -----SRALTTKYNG----------------------------TPQEA-SRPFDC----GRDGFVIGEGSGVLVLEE--- 185 (358)
Q Consensus 147 -----~~~l~~~~~~----------------------------~~~~~-~~pf~~----~~~g~~~geGaaa~vL~~--- 185 (358)
.......|+. .+... ..++.. ..+.....||++++++..
T Consensus 155 ~~g~~A~~~~~~yGitre~~d~~Av~sh~~A~~np~a~~~~eI~~~~v~~~~~~~dp~~r~d~~~~~dg~a~l~~a~~~~ 234 (392)
T COG0183 155 LMGLTAERYAKRYGISREDQDEVAVKSHKNAAANPKAGFFDEITPEDVLNSPVVADPLRRLDCSPTSDGAAALVPAFEEV 234 (392)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhHhcCCCCceeeEEecCCceecCCcccCCCCCChhhhcCceeccccC
Confidence 0000000000 00000 001110 011123455555555554
Q ss_pred -----------------------HHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCC-CCCcc
Q 018323 186 -----------------------LEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQ-SHQVD 241 (358)
Q Consensus 186 -----------------------~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~-~~did 241 (358)
.+.+.+++..+.++++++.+..- .|... .....++.++|+.+++. .+|||
T Consensus 235 ~g~~tagnas~i~dga~a~~~~~~~~~~~~~l~~~A~~~a~~~aGv-----~p~~~-~~~v~av~~~~~~~~l~~~edlg 308 (392)
T COG0183 235 GGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGV-----DPSIM-DGPVAAVHDALTIAGLLALEDLG 308 (392)
T ss_pred CceEEEecccccccHHHHHHHhhHHHHHHCCCcHHHHHHHHHHhCC-----Ccccc-cCCHHHHHHHHHHcCCchhhhcC
Confidence 33344444444444444443321 11111 22345678899999998 89999
Q ss_pred EEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccC--CcCCcccchhHHHHHHHHHHHHh
Q 018323 242 YVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHH 304 (358)
Q Consensus 242 ~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~ 304 (358)
++|.+ |.++.......+.. +..|||...+ .+|||.||||+..+.+++++|++
T Consensus 309 l~e~n----------Eafa~~~~~~~~~~-G~~~VN~~GGaiA~GHPiGAtG~~~~~~l~~ql~~ 362 (392)
T COG0183 309 LAEKG----------EAFAAVALGVTKIL-GDLPVNPSGGAIALGHPIGATGARILVELARQLRG 362 (392)
T ss_pred ceecC----------hHHHHHHHhhHHhc-CCceeCCCcchhhcCCCccchHHHHHHHHHHHHhh
Confidence 99999 98888776543322 3478998888 67999999999999999999987
|
|
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=99.72 E-value=1e-16 Score=148.55 Aligned_cols=243 Identities=17% Similarity=0.153 Sum_probs=158.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+++|+++++++ .+++++..... .....+.+|+..+
T Consensus 47 ~~~~l~~~a~~~aL~~ag~~~~~Id-----~li~~~~~~~~--------------------------~~~~~~~~i~~~l 95 (324)
T cd00827 47 DVPTMAVEAARRALERAGIDPDDIG-----LLIVATESPID--------------------------KGKSAATYLAELL 95 (324)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCCC--------------------------CCccHHHHHHHHc
Confidence 3578999999999999999998888 88888754211 0234567899999
Q ss_pred CCC-CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCc
Q 018323 93 GFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 171 (358)
Q Consensus 93 gl~-gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g 171 (358)
|++ .|.++++.+|+|++.||..|.++|++|.++.+||+++|.+.... ......+
T Consensus 96 g~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~~-------------------------~~~~~~~ 150 (324)
T cd00827 96 GLTNAEAFDLKQACYGGTAALQLAANLVESGPWRYALVVASDIASYLL-------------------------DEGSALE 150 (324)
T ss_pred CCCCCceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhcc-------------------------cCCCCcc
Confidence 995 58999999999999999999999999999999999999853222 1234577
Q ss_pred eeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCC-----------------------CCCCCC----C---ChHH
Q 018323 172 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH-----------------------HITQPH----I---DGKG 221 (358)
Q Consensus 172 ~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~-----------------------~~~~~~----~---~~~~ 221 (358)
+++|||++|+||++.+... ...+ ......+++. ...... . ....
T Consensus 151 ~~~gdgaaA~ll~~~~~~~--~~~i----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (324)
T cd00827 151 PTLGDGAAAMLVSRNPGIL--AAGI----VSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKL 224 (324)
T ss_pred ccccCceEEEEEecCcccc--cCCc----eeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHH
Confidence 8999999999999765420 1111 1111111110 000000 0 0133
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCC-CCCcHHHHHHHHHHhhcccCCCCccee--cccCCcCCcccchhHHHHHHH
Q 018323 222 AILAMTRALKQSGLQSHQVDYVNAHATST-PLGDTVEATAIRTVFSDHATSGSLAFS--STKGAIGHLLGAAGAVEAIFA 298 (358)
Q Consensus 222 ~~~~~~~al~~agl~~~did~i~~h~~gt-~~~d~~E~~a~~~~~~~~~~~~~~~v~--~~k~~~Gh~~~asG~~~l~~~ 298 (358)
...+++++|++.+++ +||+++..|-.+. ... ..+.+.++... ..+... ..-.-+||+.+++-.+.+..+
T Consensus 225 ~~~~~~~~l~~~~~~-~~i~~~~~h~~~~~~~~-----~~~~~~l~~~~--~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~ 296 (324)
T cd00827 225 IAKVVRKALDRAGLS-EDIDYFVPHQPNGKKIL-----EAVAKKLGGPP--EKASQTRWILLRRVGNMYAASILLGLASL 296 (324)
T ss_pred HHHHHHHHHHHcccc-cccceeeccCchHHHHH-----HHHHHHccchH--hhhccchhhHHHHhCchHHHHHHHHHHHH
Confidence 456788999999999 9999999995443 211 11222222110 011111 234578898887766665544
Q ss_pred HHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeE
Q 018323 299 VLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLL 353 (358)
Q Consensus 299 ~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~i 353 (358)
+ +.+. ..+.+..+.-++|.|-...+++
T Consensus 297 ~---~~~~-------------------------~~~Gd~vl~~~~G~G~~~~~~~ 323 (324)
T cd00827 297 L---ESGK-------------------------LKAGDRVLLFSYGSGFTAEAFV 323 (324)
T ss_pred H---hcCC-------------------------CCCCCEEEEEEeccchhheecc
Confidence 3 2222 1234777888899887766554
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.9e-16 Score=146.19 Aligned_cols=240 Identities=19% Similarity=0.200 Sum_probs=155.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+++|+++||+++|++++++| .+++++..+.+ ..+..+..++..+
T Consensus 49 ~~~~la~~Aa~~aL~~agl~~~dID-----~li~~s~~~~~--------------------------~~p~~a~~v~~~L 97 (345)
T TIGR00748 49 DTATIGVEAARNALKRAKIDPKDIG-----AVYVGSESHPY--------------------------AVKPTATIVAEAI 97 (345)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCCc--------------------------cccchHHHHHHHc
Confidence 3578999999999999999999998 88887754221 1123356889999
Q ss_pred CCCC--CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCC
Q 018323 93 GFQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 170 (358)
Q Consensus 93 gl~g--p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 170 (358)
|++. +.+.+..+|++++.||..|.++|++|.++.+||++.|.+... +.+ ..
T Consensus 98 Gl~~~~~~~dv~~aC~g~~~al~~A~~~i~sg~~~~vLVv~~d~~~~~-------------------~~~--------~~ 150 (345)
T TIGR00748 98 GATPDLTAADLEFACKAGTAGIQACMGLVASGMIKYGLAIGADTAQGA-------------------PGD--------AL 150 (345)
T ss_pred CCCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeecccC-------------------CCc--------cC
Confidence 9963 788999999999999999999999999999999999974210 111 11
Q ss_pred ceeeecceEEEEeccHHHHHhcCCeeeEEEEeee-eecCCCC-C---CC--C------CC---ChHHHHHHHHHHHHHcC
Q 018323 171 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYG-MSGDAHH-I---TQ--P------HI---DGKGAILAMTRALKQSG 234 (358)
Q Consensus 171 g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~-~~~~~~~-~---~~--~------~~---~~~~~~~~~~~al~~ag 234 (358)
-+..||||+|+||++.+.. ..+.+.. ...++.. . .. + .. .......+++++|+++|
T Consensus 151 ~~~~GDGAaA~vl~~~~~~--------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g 222 (345)
T TIGR00748 151 EYTAGAGGAAYIIGEKNTV--------AYFEGTYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKLG 222 (345)
T ss_pred cccCCCceEEEEEccCCcc--------eEeecccceecccccccccCCCcCCCcCCeecChHHHHHHHHHHHHHHHHHcC
Confidence 2557999999999864311 1222211 1111100 0 00 1 00 01223367889999999
Q ss_pred CCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCC
Q 018323 235 LQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLA 314 (358)
Q Consensus 235 l~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~ 314 (358)
++++|||++.+|-.+... ...+.+.++-.. .+++.+-.-..+||+.+|+=.+.|..++.. +
T Consensus 223 l~~~did~~i~Hq~~~~~-----~~~~~~~lgl~~--ek~~~~~~~~~~GNt~sAsipl~L~~~~~~-----~------- 283 (345)
T TIGR00748 223 LTPEDFDYAVFHQPNGKF-----YLVAARMLGFPK--EQVKPGLLTPRIGNTYSGATPVGLSAVLDI-----A------- 283 (345)
T ss_pred CCHHHcCEEEeCCCChHH-----HHHHHHHcCCCH--HHeeccccccccCchhhhHHHHHHHHHHHh-----c-------
Confidence 999999999999433221 222333333221 112221112578999888877766655421 1
Q ss_pred CCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 315 KPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
.+.+.++..+||.|-+..+++++
T Consensus 284 ------------------~~Gd~vll~~~G~G~s~~~~~~~ 306 (345)
T TIGR00748 284 ------------------EPGDRILAVSYGSGAGSDAFSIV 306 (345)
T ss_pred ------------------CCCCEEEEEEecCCcceeEEEEE
Confidence 11356788899988888888774
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.4e-17 Score=139.91 Aligned_cols=270 Identities=20% Similarity=0.263 Sum_probs=180.5
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcCC
Q 018323 15 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 94 (358)
Q Consensus 15 ~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 94 (358)
+.|+.++....|+.-.++.+.+| -+++|+...+. -.+.++...+-.-|+
T Consensus 67 hdlar~al~~ll~kt~lpke~~d-----yii~gtviqev--------------------------ktsniareaal~agf 115 (465)
T KOG1392|consen 67 HDLAREALKALLEKTKLPKEQLD-----YIICGTVIQEV--------------------------KTSNIAREAALLAGF 115 (465)
T ss_pred hHHHHHHHHHHHHhccCCHHHhc-----eeeehhhHHHH--------------------------hcchHHHHHHHhcCC
Confidence 45777777777888888766666 67777643211 123444455555566
Q ss_pred C--CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhh------------------------hc
Q 018323 95 Q--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCK------------------------SR 148 (358)
Q Consensus 95 ~--gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~------------------------~~ 148 (358)
. -|..+|..+|-|+.+|+....-+|.+|.||+++.+|+|.+++.+....-.. ..
T Consensus 116 sdktpahtvtmacissn~amttgmgliatg~~dvivaggvelmsdvpirhsrkmrklml~~nkak~~gqrl~l~s~fr~n 195 (465)
T KOG1392|consen 116 SDKTPAHTVTMACISSNVAMTTGMGLIATGNADVIVAGGVELMSDVPIRHSRKMRKLMLGMNKAKDVGQRLKLGSQFRKN 195 (465)
T ss_pred CCCCccceeeeehhccchhhhccceeEeeCCcCEEEEcceeecccCchhhhHHHHHHhhccccccchhhhhhHHhhhhhh
Confidence 5 499999999999999999999999999999999999998765442111000 00
Q ss_pred ccccc-----------------------cCCCC----------------------------------------CC-----
Q 018323 149 ALTTK-----------------------YNGTP----------------------------------------QE----- 160 (358)
Q Consensus 149 ~l~~~-----------------------~~~~~----------------------------------------~~----- 160 (358)
.++.. ++-+. +.
T Consensus 196 flapelpavaefstgetmghsadrlaaafnvsr~eqdeyalrshtlakeaq~~g~ftdvvpfkv~gkd~~t~kdngirvs 275 (465)
T KOG1392|consen 196 FLAPELPAVAEFSTGETMGHSADRLAAAFNVSRREQDEYALRSHTLAKEAQKNGKFTDVVPFKVDGKDPKTIKDNGIRVS 275 (465)
T ss_pred ccCcCcchheeccccccccccHHHHHHHhccchhhhhHHHHhhhHHHHHHHhcCcccceeeEecCCCCcceecCCCcccC
Confidence 00000 00000 00
Q ss_pred -----------CCCCCc--CCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeec-CCCCCCCCCCChHHHHHHH
Q 018323 161 -----------ASRPFD--CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSG-DAHHITQPHIDGKGAILAM 226 (358)
Q Consensus 161 -----------~~~pf~--~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~-~~~~~~~~~~~~~~~~~~~ 226 (358)
..+||+ ..++.-.+.|||.+.++..+|.|...|.+|.++++.+-..+ |+.. ..-.+....+
T Consensus 276 sle~laklkpafvkpygtvtaanasfltdgasa~limteekala~gykpkaylrdflyvsqdpkd-----qlllgpay~i 350 (465)
T KOG1392|consen 276 SLEKLAKLKPAFVKPYGTVTAANASFLTDGASAALIMTEEKALANGYKPKAYLRDFLYVSQDPKD-----QLLLGPAYVI 350 (465)
T ss_pred CHHHHhhcCchhccCcceeEecccchhcCcchhhhhhhHHHHHHcCCCchHHhhhheeeccCchh-----heeccccccc
Confidence 011221 01222238999999999999999999999999999876543 4321 1112335678
Q ss_pred HHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHh----------hcccC-----CCCcce---ecccC--CcCCc
Q 018323 227 TRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVF----------SDHAT-----SGSLAF---SSTKG--AIGHL 286 (358)
Q Consensus 227 ~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~----------~~~~~-----~~~~~v---~~~k~--~~Gh~ 286 (358)
.+.|+++|++..|||.+|+| |+++-+-+. +.... -+.+|+ ++-.+ .+||+
T Consensus 351 pkll~kagltlkdid~feih----------eafagqilanlkamdsdwfck~ymgr~~kvg~ppl~k~nnwggslsighp 420 (465)
T KOG1392|consen 351 PKLLDKAGLTLKDIDVFEIH----------EAFAGQILANLKAMDSDWFCKEYMGRSGKVGRPPLDKLNNWGGSLSIGHP 420 (465)
T ss_pred HHHHHHcCCcccccchhhhH----------HHHhHHHHhhhhhhcchHHHHHHhcccCccCCCChHHhcccCcceecCCc
Confidence 99999999999999999999 877654332 21111 122332 23333 78999
Q ss_pred ccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 287 LGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 287 ~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
++|+|..-...+...|+. ...+++++.++..||+...++++.|+
T Consensus 421 fgatgvrl~mh~anrl~~----------------------------e~gqygvvaacaaggqgvamlieayp 464 (465)
T KOG1392|consen 421 FGATGVRLAMHSANRLKE----------------------------EKGQYGVVAACAAGGQGVAMLIEAYP 464 (465)
T ss_pred ccccchhhHHHHHhHHHh----------------------------hcCceeEeehhhcCCcceEEEeeccC
Confidence 999999877766655543 23588999999999999999999985
|
|
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.5e-15 Score=141.78 Aligned_cols=240 Identities=19% Similarity=0.217 Sum_probs=155.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+++|+++++++ .+++++..+.+ ..+..+.+|+..+
T Consensus 50 ~~~~la~~Aa~~aL~~ag~~~~dId-----~li~~s~~~~~--------------------------~~p~~a~~v~~~L 98 (347)
T PRK04262 50 DTATIAVEAARNALKRAGIDPKEIG-----AVYVGSESHPY--------------------------AVKPTATIVAEAL 98 (347)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCCc--------------------------ccccHHHHHHHHc
Confidence 3578999999999999999998887 78887754221 1123355889999
Q ss_pred CCCC--CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCC
Q 018323 93 GFQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 170 (358)
Q Consensus 93 gl~g--p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 170 (358)
|+++ +.+.++.+|++++.+|..|.++|++|.++.+||++.|..... +.+. +
T Consensus 99 gl~~~~~~~dv~~~C~~~~~aL~~A~~~i~sg~~~~aLVv~~e~~~~~-------------------~~~~---~----- 151 (347)
T PRK04262 99 GATPDLTAADLEFACKAGTAALQAAMGLVKSGMIKYALAIGADTAQGA-------------------PGDA---L----- 151 (347)
T ss_pred CCCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeeccC-------------------CCCC---C-----
Confidence 9974 678899999999999999999999999999999999972100 1110 1
Q ss_pred ceeeecceEEEEeccHHHHHhcCCeeeEEEEeee-eecCCCC-CC-----CCC----C-----ChHHHHHHHHHHHHHcC
Q 018323 171 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYG-MSGDAHH-IT-----QPH----I-----DGKGAILAMTRALKQSG 234 (358)
Q Consensus 171 g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~-~~~~~~~-~~-----~~~----~-----~~~~~~~~~~~al~~ag 234 (358)
-+..||||+|+||++.+. . .+|.+.. ...+... .. .+. . .......+++++|+++|
T Consensus 152 ~~~~GDGA~A~ll~~~~~----~----~~i~~~~~~~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g 223 (347)
T PRK04262 152 EYTAAAGGAAFIIGKEEV----I----AEIEATYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFKHIISAAKGLMEKLG 223 (347)
T ss_pred CCcCCCCcEEEEEecCcc----c----ceeeccccccccchhhcCCCCCcCCCcCceecchHHHHHHHHHHHHHHHHHhC
Confidence 134599999999986331 1 2233221 1111110 00 010 0 11345578899999999
Q ss_pred CCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCC
Q 018323 235 LQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLA 314 (358)
Q Consensus 235 l~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~ 314 (358)
++++|||++.+|-.+.... ..+.+.++-.. .++..+..-..+||+.+|+=.+.+..++. . +
T Consensus 224 l~~~dId~~v~Hq~n~~~~-----~~~~~~Lgl~~--ek~~~~~~~~~~GNt~sAsi~~~L~~~~~---~--~------- 284 (347)
T PRK04262 224 LKPSDYDYAVFHQPNGKFP-----LRVAKMLGFTK--EQVKPGLLTPYIGNTYSGSALLGLAAVLD---V--A------- 284 (347)
T ss_pred cCHHHhceeecCCCchHHH-----HHHHHHcCCCH--HHhhccchhhhhCChHHHHHHHHHHHHHH---h--C-------
Confidence 9999999999994433322 22233333221 12222222367899998887666655432 1 1
Q ss_pred CCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 315 KPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
.+...++..+||.|-+...++++
T Consensus 285 ------------------~~Gd~vll~~~G~G~~~~~~~~~ 307 (347)
T PRK04262 285 ------------------KPGDRILVVSFGSGAGSDAFSIT 307 (347)
T ss_pred ------------------CCCCEEEEEecCCCcceeeEEEE
Confidence 11356788888888877666664
|
|
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.67 E-value=1e-15 Score=142.72 Aligned_cols=252 Identities=13% Similarity=0.067 Sum_probs=157.7
Q ss_pred cchhhccC----CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhh
Q 018323 4 RGLILKSI----ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRI 79 (358)
Q Consensus 4 ~~~~~~~~----~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (358)
.+.+.|+. .....|+.+|+++||+++|+++++|+ .+++++.++ ..
T Consensus 46 ~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId-----~lI~~t~t~--------------------------d~ 94 (353)
T PRK12880 46 IGLNTRYICDENTCVSDLGKHAANTLLQGLNIDKNSLD-----ALIVVTQSP--------------------------DF 94 (353)
T ss_pred cCceEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCC--------------------------CC
Confidence 34444544 23678999999999999999999887 888887652 23
Q ss_pred hhhHHHHHHHHHcCCCC--CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCC
Q 018323 80 LINMASGHVSMKYGFQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGT 157 (358)
Q Consensus 80 ~~~~~a~~ia~~lgl~g--p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~ 157 (358)
..+..+.+|+..||++. +++.|..+|++++.+|..|..+|++|..+ +||+++|..+....
T Consensus 95 ~~P~~a~~v~~~Lg~~~~~~~~di~~~C~g~~~aL~~A~~~i~~~~~~-~LVv~~e~~S~~~~----------------- 156 (353)
T PRK12880 95 FMPSTACYLHQLLNLSSKTIAFDLGQACAGYLYGLFVAHSLIQSGLGK-ILLICGDTLSKFIH----------------- 156 (353)
T ss_pred CCCcHHHHHHHHhCCCCCceEEehhhhhHHHHHHHHHHHHHHHcCCCC-EEEEEehhhhccCC-----------------
Confidence 34677899999999973 67899999999999999999999999999 88888887321110
Q ss_pred CCCCCCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecC------C------CCCC------CC----
Q 018323 158 PQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGD------A------HHIT------QP---- 215 (358)
Q Consensus 158 ~~~~~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~------~------~~~~------~~---- 215 (358)
++......++||||+|+||++.+... + . ..+...+...+ + .... .+
T Consensus 157 -------~~d~~~~~lFGDGAaA~vl~~~~~~~--~--~-~~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~ 224 (353)
T PRK12880 157 -------PKNMNLAPIFGDGVSATLIEKTDFNE--A--F-FELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFR 224 (353)
T ss_pred -------cccCCceeeecccceEEEEEecCCCC--c--e-EEEEecCCCCCeEEecCCCcCCCccccccccccccccccc
Confidence 11123356899999999998543211 1 1 11111110000 0 0000 00
Q ss_pred -----CCCh--------HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCC
Q 018323 216 -----HIDG--------KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGA 282 (358)
Q Consensus 216 -----~~~~--------~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~ 282 (358)
..++ .....+++++|+++|++++|||++.+|-.+.. -...+.+.++-.. .+++ ..+-..
T Consensus 225 ~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ~~~~-----i~~~i~~~Lgl~~--ek~~-~~~l~~ 296 (353)
T PRK12880 225 QLENLYMDGANIFNMALECEPKSFKEILEFSKVDEKDIAFHLFHQSNAY-----LVDCIKEELKLND--DKVP-NFIMEK 296 (353)
T ss_pred cCceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHH-----HHHHHHHHhCCCH--HHhh-hhhHHh
Confidence 0011 11235788999999999999999999933222 3344444444321 1121 112235
Q ss_pred cCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 283 IGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 283 ~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
+|++.++|=...+-+. ++.+. .+ .+..+||.|=+..+++|+-
T Consensus 297 ~GNtssasip~~L~~~---~~~~~----------------------------~~-~ll~~~G~G~s~g~~ll~~ 338 (353)
T PRK12880 297 YANLSACSLPALLCEL---DTPKE----------------------------FK-ASLSAFGAGLSWGSAVLNF 338 (353)
T ss_pred hCCHHHHHHHHHHHHH---HHcCC----------------------------cE-EEEEEEchhhhheEeEEEE
Confidence 7776665543333322 11111 12 5777888888888888763
|
|
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.2e-15 Score=141.52 Aligned_cols=254 Identities=15% Similarity=0.135 Sum_probs=161.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+++|+++++++ .++++++++ ...+..+.+|...+
T Consensus 84 ~~~~la~~Aa~~aL~~a~~~~~~Id-----~li~~s~~~---------------------------~~~P~~a~~i~~~l 131 (361)
T cd00831 84 EARELAEEAARGALDEAGLRPSDID-----HLVVNTSTG---------------------------NPTPSLDAMLINRL 131 (361)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHCC-----EEEEECCCC---------------------------CCCCCHHHHHHHHh
Confidence 3578999999999999999998887 777777542 12345677999999
Q ss_pred CCCC--Cceecc-CCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCC
Q 018323 93 GFQG--PNHAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 169 (358)
Q Consensus 93 gl~g--p~~~v~-~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 169 (358)
|++. +++.+. .+|++++.||..|..+|++|..+.+||+++|..+.... +.+ ..+..-
T Consensus 132 gl~~~~~~~dv~~~~C~~~~~al~~A~~~~~~~~~~~aLvv~~e~~s~~~~-----------------~~d---~~~~~~ 191 (361)
T cd00831 132 GLRPDVKRYNLGGMGCSAGAIALDLAKDLLEANPGARVLVVSTELCSLWYR-----------------GPD---HRSMLV 191 (361)
T ss_pred CCCcccchhccccccchhHHHHHHHHHHHHHHCCCCEEEEEEeecccceeC-----------------CCC---cHHHhh
Confidence 9974 678898 89999999999999999999999999999998433110 000 000001
Q ss_pred CceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeee--------------cCCCCCC----CCCCChHHHHHHHHHHHH
Q 018323 170 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMS--------------GDAHHIT----QPHIDGKGAILAMTRALK 231 (358)
Q Consensus 170 ~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~--------------~~~~~~~----~~~~~~~~~~~~~~~al~ 231 (358)
..+++||||+|+||++.+..... ......+.+.... ..+.+.. .+........++++++|+
T Consensus 192 ~~~lfGDgaaA~ll~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~ 270 (361)
T cd00831 192 GNALFGDGAAAVLLSNDPRDRRR-ERPLFELVRAASTLLPDSEDAMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLA 270 (361)
T ss_pred hhhhccCCceEEEEEcCCCcccc-cccceeeecccceeeecCCCceEEEEEcceEEEEeChhHHHHHHHHHHHHHHHHhc
Confidence 35779999999999975532100 0111122221110 0000000 000111345567889999
Q ss_pred Hc--CCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcce-ecccCCcCCcccchhHHHHHHHHHHHHhCCCC
Q 018323 232 QS--GLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAF-SSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAP 308 (358)
Q Consensus 232 ~a--gl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v-~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ip 308 (358)
++ |++++|||++.+|-.+... ...+.+.++... .+++. ..+-..+||+.+++=.+.|..++ +++.+
T Consensus 271 ~~~~g~~~~did~~~~H~~~~~i-----~~~v~~~lgl~~--~~~~~s~~~l~~~GN~~sasi~~~L~~~~---~~g~~- 339 (361)
T cd00831 271 RLGIGLFKLAFDHWCVHPGGRAV-----LDAVEKALGLSP--EDLEASRMVLRRYGNMSSSSVLYVLAYME---AKGRV- 339 (361)
T ss_pred cccCCCccccceEEEECCCChHH-----HHHHHHHcCCCH--HHHHHHHHHHHHhCCchhccHHHHHHHHH---HhCCC-
Confidence 99 9999999999999544332 233444443321 11111 12334789999888666666553 33321
Q ss_pred CCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEe
Q 018323 309 LTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLF 354 (358)
Q Consensus 309 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il 354 (358)
.+.+.++..+||.|-+..++++
T Consensus 340 ------------------------~~Gd~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 340 ------------------------KRGDRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred ------------------------CCCCEEEEEEEcCCceeeeeeC
Confidence 2246677788998877766653
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=99.63 E-value=9.7e-15 Score=130.25 Aligned_cols=191 Identities=16% Similarity=0.185 Sum_probs=132.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||++||+++++++ .+++|+.. + ....+..++..||
T Consensus 50 e~eLa~eAa~~ALekAGL~~~DID-----~IIvGdl~---------------------------~--Q~~~As~vA~~LG 95 (327)
T TIGR02845 50 ERKLMEDAVNLALKKANLKKDDVD-----FFLAGDLL---------------------------N--QIITANFVARDLG 95 (327)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEeCCC---------------------------C--cccHHHHHHHHhC
Confidence 467999999999999999999888 78877521 0 0134668889999
Q ss_pred CCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCC--cCCCCc
Q 018323 94 FQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPF--DCGRDG 171 (358)
Q Consensus 94 l~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf--~~~~~g 171 (358)
+ |.+.++++|++++.||..|.++|++|.+|.|||++.|.+.+...... ....| .++...
T Consensus 96 I--P~fdV~~ACSTf~~AL~lAa~lI~SG~ad~VLVV~Ssh~S~AErqfr-----------------~p~eyg~q~~~ta 156 (327)
T TIGR02845 96 I--PFLGLYGACSTSMETLALGAMLVDGGFADRVLAATSSHYATAERQFR-----------------YPTEYGVQKPPTA 156 (327)
T ss_pred C--CEEEEeccCHHHHHHHHHHHHHHhCCCCCEEEEEEecccchhhhhcc-----------------cccccccCCCCee
Confidence 7 88999999999999999999999999999999999998543322110 01123 344566
Q ss_pred eeeecceEEEEeccHHHHHhcCCee----eEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecC
Q 018323 172 FVIGEGSGVLVLEELEHAKKRGAKI----YAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHA 247 (358)
Q Consensus 172 ~~~geGaaa~vL~~~~~A~~~g~~~----~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~ 247 (358)
..++|||+|+||++.+ .+.++ .++|..++.. |+.... ..+.++....|.+-|++.|.+|+|-|.|..-.
T Consensus 157 ~~tgdGAGA~vl~~~~----~~~~i~~~t~gkv~d~g~~-d~~nmg--aamapaa~dti~~h~~d~~~~~~~yd~i~tgd 229 (327)
T TIGR02845 157 QWTVTGAGAVLLASTG----GGPRITSATIGKVVDYGIT-DPLDMG--AAMAPAAADTIEAHFKDTGRSVDDYDLIVTGD 229 (327)
T ss_pred eEEEcccEEEEEeecC----CCCceEEEEEEEEEecCCC-Ccccch--hhhhHHHHHHHHHHHHHcCCChhhccEEEecc
Confidence 7899999999998753 12222 1344444442 211111 11235566788999999999999999999864
Q ss_pred CCCCCCcHHHHHHHHHHhhccc
Q 018323 248 TSTPLGDTVEATAIRTVFSDHA 269 (358)
Q Consensus 248 ~gt~~~d~~E~~a~~~~~~~~~ 269 (358)
.|.. -...+.+++.++.
T Consensus 230 lg~v-----g~~i~~~ll~~~g 246 (327)
T TIGR02845 230 LARV-----GSEILRKLLKERG 246 (327)
T ss_pred hHHH-----HHHHHHHHHHHcC
Confidence 4422 2334555554433
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=6.5e-15 Score=138.60 Aligned_cols=262 Identities=13% Similarity=0.114 Sum_probs=160.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+++|+++++|+ .+++.++++. ..+..+.+|+..||
T Consensus 102 a~~La~~Aa~~aL~~ag~~~~dId-----~ii~~t~t~~---------------------------~~P~~a~~l~~~LG 149 (393)
T PLN03172 102 VPKLGKEAAAKAIKEWGQPKSKIT-----HLVFCTTSGV---------------------------DMPGADYQLTKLLG 149 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEccCCC---------------------------cCchHHHHHHHHhC
Confidence 447999999999999999998887 7777776521 12457889999999
Q ss_pred CCCC---ceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCC
Q 018323 94 FQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 170 (358)
Q Consensus 94 l~gp---~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 170 (358)
++.. .+.+..+|++++.+|..|.++++++..+.|||+++|.++.... . +.+ +-.+.-..
T Consensus 150 l~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~~--~--------------~~d--~~~~~~v~ 211 (393)
T PLN03172 150 LKPSVKRFMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSEITAVTFR--G--------------PSD--THLDSLVG 211 (393)
T ss_pred CCCCceEEeeeCCchHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhhhc--c--------------ccc--ccHHhhhc
Confidence 9873 3567899999999999999999999999999999998531110 0 000 00011123
Q ss_pred ceeeecceEEEEeccHHHHHhcCCeeeEEEEeeee----ecCCC---CCC-----------CCCCChHHHHHHHHHHHHH
Q 018323 171 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGM----SGDAH---HIT-----------QPHIDGKGAILAMTRALKQ 232 (358)
Q Consensus 171 g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~----~~~~~---~~~-----------~~~~~~~~~~~~~~~al~~ 232 (358)
..++||||+|+||+..+... . .++.-+|.+... .+++. .+. .|......+...+++.|++
T Consensus 212 ~~LFGDGAaAvVl~~~~~~~-~-~~~~~~i~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~L~~ 289 (393)
T PLN03172 212 QALFGDGAAAVIIGADPDTK-I-ERPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAP 289 (393)
T ss_pred cchhcCceEEEEEecCCCCc-c-cCceeEEeeeccEEecCCcccccceEEcCCcEEEEechHHHHHHHHHHHHHHHHhhh
Confidence 57799999999998643211 0 111113333321 11111 000 1111123345677889999
Q ss_pred cCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCccee-cccCCcCCcccchhHHHHHHHHHH-HHhCCCCCC
Q 018323 233 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLA-IHHGVAPLT 310 (358)
Q Consensus 233 agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~-~~k~~~Gh~~~asG~~~l~~~~~~-l~~~~ipp~ 310 (358)
.|++..||++|.+|--|.. -..++.+.++-.. .++..+ .+-..+|++.++|=++-|-+.... ++.+.+
T Consensus 290 ~gl~~~di~~~~~Hqgg~~-----Il~~v~~~Lgl~~--~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~--- 359 (393)
T PLN03172 290 IGINDWNSIFWIAHPGGPA-----ILDQVEIKLDLKE--EKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKG--- 359 (393)
T ss_pred cCCCccccceEEecCCcHH-----HHHHHHHHcCCCH--HHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCC---
Confidence 9999999999999943333 2344444444321 111110 123367887766644443332211 111111
Q ss_pred CCCCCCCCCCCCCCCccccCCCC-CCcEEEeeccccccceeeeEeeec
Q 018323 311 LNLAKPDPIFNDNFMPLTASKDM-PISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
+.. .....+..+||-|=+...++|+..
T Consensus 360 --------------------~~G~~~~~~ll~afGpG~t~~~~ll~~~ 387 (393)
T PLN03172 360 --------------------STGEGLEWGVLFGFGPGLTVETVVLHSV 387 (393)
T ss_pred --------------------CCCCCcceEEEEEeCCcceeeeeeeEec
Confidence 111 125678889999999999998864
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.7e-15 Score=139.47 Aligned_cols=263 Identities=13% Similarity=0.090 Sum_probs=161.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+++|+++++|+ .+++.++++. ..+..+.+|+..||
T Consensus 106 a~~La~~Aa~~AL~~ag~~~~dId-----~lI~~T~Tg~---------------------------~~Ps~a~~l~~~LG 153 (401)
T PLN03170 106 VPKLGKAAAQKAIKEWGQPKSKIT-----HLVFCTTSGV---------------------------DMPGADYQLTKMLG 153 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEccCCC---------------------------CCChHHHHHHHHhC
Confidence 346999999999999999998887 7777776421 12467889999999
Q ss_pred CCCC---ceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCC
Q 018323 94 FQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 170 (358)
Q Consensus 94 l~gp---~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 170 (358)
++.. .+.+..+|++++.+|..|.++++++..+.|||+++|.++..+. . +.. .+ ++....
T Consensus 154 l~~~~~r~~d~~~gC~G~~~aL~~A~~l~~~~~~~~vLVV~~E~~S~~~~--~--------------~~~-~~-~~~~~~ 215 (401)
T PLN03170 154 LRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFR--G--------------PSE-SH-LDSMVG 215 (401)
T ss_pred cCcccHHHHhhcChhHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhccC--C--------------ccc-ch-hhhhhh
Confidence 9864 5789999999999999999999999999999999998532110 0 000 00 112223
Q ss_pred ceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeee--------------cCCCCCC----CCCCChHHHHHHHHHHHHH
Q 018323 171 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMS--------------GDAHHIT----QPHIDGKGAILAMTRALKQ 232 (358)
Q Consensus 171 g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~--------------~~~~~~~----~~~~~~~~~~~~~~~al~~ 232 (358)
..++||||+|+||+..+... ...+..++.+.... ..+.... .|......+...++++|++
T Consensus 216 ~~LFGDGAaAvVl~~~~~~~--~~~~~~~l~~~~~~~~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~ 293 (401)
T PLN03170 216 QALFGDGAAAVIVGADPDER--VERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKP 293 (401)
T ss_pred hhhhhceeEEEEEecCCccc--ccCCceEEeeccceEecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHh
Confidence 46799999999998643210 01111123222110 0111000 0111123345678889999
Q ss_pred cCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcce-ecccCCcCCcccchhHHHHHHHHHH-HHhCCCCCC
Q 018323 233 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAF-SSTKGAIGHLLGAAGAVEAIFAVLA-IHHGVAPLT 310 (358)
Q Consensus 233 agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v-~~~k~~~Gh~~~asG~~~l~~~~~~-l~~~~ipp~ 310 (358)
+|++++||+++.+|--|.. -..++.+.++... .++.. -.+-..+||+.+++=++-|-+.... ++.+.+.+
T Consensus 294 ~gl~~~di~~~v~Hqgg~~-----il~~v~~~Lgl~~--~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~- 365 (401)
T PLN03170 294 LGITDYNSIFWVAHPGGPA-----ILDQVEAKVGLEK--ERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATT- 365 (401)
T ss_pred cCCCccccCeEEecCCcHH-----HHHHHHHHcCCCh--HHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCC-
Confidence 9999999999999933222 2334444443321 11110 0223467888877655555444321 12222211
Q ss_pred CCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 311 LNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
.......+..+||-|=+..+++|+++
T Consensus 366 ---------------------G~~~~~~ll~afGpG~t~~~~ll~~~ 391 (401)
T PLN03170 366 ---------------------GEGFDWGVLFGFGPGLTVETVVLHSV 391 (401)
T ss_pred ---------------------CCCccEEEEEEeCchHhHHhHHheec
Confidence 01125678889998888888888764
|
|
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.9e-14 Score=135.82 Aligned_cols=259 Identities=11% Similarity=0.066 Sum_probs=155.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+++|+++++|+ .+++++++ + +..+..+..|+..||
T Consensus 106 ~~~La~~Aa~~aL~~ag~~~~dId-----~lI~~t~t-~--------------------------~~~P~~a~~l~~~LG 153 (391)
T PLN03169 106 VTQMAVEASLACIKEWGRPVSDIT-----HLVYVSSS-E--------------------------ARLPGGDLYLAKQLG 153 (391)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHCC-----EEEEECcC-C--------------------------CCCCcHHHHHHHHhC
Confidence 356999999999999999998887 77777753 1 123456779999999
Q ss_pred CCCC---ceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCC
Q 018323 94 FQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 170 (358)
Q Consensus 94 l~gp---~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 170 (358)
++.. ++.+..+|++++.+|..|..+|++|..+.|||+++|..+..+. +....+ ++....
T Consensus 154 l~~~~~~~~d~~~gC~g~~~aL~~A~~~~~~~~~~~vLvv~~e~~s~~~~-----------------~~~~~~-~~d~~~ 215 (391)
T PLN03169 154 LSPDVQRVMLYFLGCSGGVAGLRVAKDIAENNPGSRVLLTTSETTILGFR-----------------PPSPDR-PYDLVG 215 (391)
T ss_pred cCCcceeeecccChhHHHHHHHHHHHHHHHhCCCCeEEEEEEEcChhhcc-----------------CCCccc-hhhhhh
Confidence 9853 4788999999999999999999999999999999998421110 000001 222334
Q ss_pred ceeeecceEEEEeccHHHHHhcCCeeeEEEEeeee----ec----------CCCC----CCCCCCChHHHHHHHHHHHHH
Q 018323 171 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGM----SG----------DAHH----ITQPHIDGKGAILAMTRALKQ 232 (358)
Q Consensus 171 g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~----~~----------~~~~----~~~~~~~~~~~~~~~~~al~~ 232 (358)
..++||||+|+||+..+.... ....+ .+..... .+ +++. ...|......+...++++|++
T Consensus 216 ~~lFGDGAaA~vl~~~~~~~~-~~~~~-~l~~~~~~~ip~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~ 293 (391)
T PLN03169 216 AALFGDGAAAVIIGADPIPVS-ESPFF-ELHTAIQQFLPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKK 293 (391)
T ss_pred hhhccCceEEEEEecCCCccc-CCcce-EEEeeeeeEcCCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHHH
Confidence 568999999999986442200 01111 1211110 00 0000 000111113345677899999
Q ss_pred cCCCCCCcc--EEEecCCCCCCCcHHHHHHHHHHhhcccCCCCccee-cccCCcCCcccchhHHHHHHHHHHHHhCCCCC
Q 018323 233 SGLQSHQVD--YVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLAIHHGVAPL 309 (358)
Q Consensus 233 agl~~~did--~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~-~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp 309 (358)
+|++++||| ++.+|-.+. .-..++.+.++-.. ..++.+ .+-..+||+.+++=.+.|-+. ++.+.+-
T Consensus 294 ~gl~~~did~~~~v~Hq~n~-----~il~~v~~~Lgl~~--ek~~~s~~~l~~~GNtsSasip~~L~~~---~~~~~~~- 362 (391)
T PLN03169 294 AGLVEKDYNDLFWAVHPGGP-----AILNRLEKKLKLAP--EKLECSRRALMDYGNVSSNTIVYVLEYM---REELKKK- 362 (391)
T ss_pred cCCCCCCCCcceEEecCCCH-----HHHHHHHHHcCCCH--HHHHHHHHHHHHhCCchHhHHHHHHHHH---HHhhccc-
Confidence 999999999 888993331 12333444343221 112211 123467888777644443322 2222210
Q ss_pred CCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 310 TLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
. ..+.+..+..+||-|=+...++|+.
T Consensus 363 -------------------~--~~~gd~~ll~afG~G~s~~~~ll~~ 388 (391)
T PLN03169 363 -------------------G--EEDEEWGLILAFGPGITFEGILARN 388 (391)
T ss_pred -------------------C--CCCCcEEEEEEEcccHhHHHHHHhh
Confidence 0 1124667778888887777777654
|
|
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=6.7e-14 Score=132.36 Aligned_cols=259 Identities=15% Similarity=0.123 Sum_probs=152.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+++|+++++|+ .|+++++++. . .+..+.+|...|
T Consensus 107 ~a~~la~~Aa~~aL~~ag~~~~dId-----~li~~t~t~~--------------------------~-~P~~a~~v~~~L 154 (399)
T PLN03171 107 AVPELAAEAAKKAIAEWGRPAADIT-----HLVVTTNSGA--------------------------H-IPGVDFRLVPLL 154 (399)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCC--------------------------C-CCchHHHHHHHh
Confidence 4668999999999999999999888 8888876521 1 235677899999
Q ss_pred CCCCC---ceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCC
Q 018323 93 GFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 169 (358)
Q Consensus 93 gl~gp---~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 169 (358)
|++.. .+.+..+|++++.+|..|..+|++|.++.|||+++|.++.... +.+.. .++..-
T Consensus 155 Gl~~~~~~~~~~~~gC~g~~~aL~~A~~li~~~~~~~vLVv~~e~~s~~~~-----------------~~d~~-~~~~~v 216 (399)
T PLN03171 155 GLRPSVRRTMLHLNGCFAGAAALRLAKDLAENNRGARVLVVAAEITLLLFN-----------------GPDEG-CFQTLL 216 (399)
T ss_pred CCCcccceeeccCCccHHHHHHHHHHHHHHHhCCCCeEEEEEEeccccccC-----------------CCCcc-cHHhhh
Confidence 99853 4566779999999999999999999999999999998422211 00000 011112
Q ss_pred CceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCC---CC----C----CCCC----hHHHHHHHHHHHHH--
Q 018323 170 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH---IT----Q----PHID----GKGAILAMTRALKQ-- 232 (358)
Q Consensus 170 ~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~---~~----~----~~~~----~~~~~~~~~~al~~-- 232 (358)
.+.++||||+|+||++.+...+. ....+........+.. +. . -... .....+.+++++++
T Consensus 217 ~~~LFGDGAaA~vl~~~~~~~~~---~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~~~l 293 (399)
T PLN03171 217 NQGLFGDGAAAVIVGADADAAER---PLFEIVSAAQAIIPESDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAF 293 (399)
T ss_pred ccccccCccEEEEEecCCCCCCC---CceEEEEeeeEEecCCchheEEEEEcCCceEEECchhHHHHHHHHHHHHHHHHH
Confidence 36789999999999874422111 1123332222111110 00 0 0000 12233344555554
Q ss_pred -------cCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCccee-cccCCcCCcccchhHHHHHHHHHHHHh
Q 018323 233 -------SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLAIHH 304 (358)
Q Consensus 233 -------agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~-~~k~~~Gh~~~asG~~~l~~~~~~l~~ 304 (358)
+|++++||+++ +| +.+-. -...+.+.++-.. .+.+.+ .+-..+|++.++|=.+.|-+++.+.+.
T Consensus 294 ~~~~~~~~g~~~~di~~~-~H----q~~~~-il~~v~~~Lgl~~--ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~ 365 (399)
T PLN03171 294 APLLGGDGGAEWNDLFWA-VH----PGSSA-ILDQVDAALGLEP--EKLAASRRVLSDYGNMFGATVIFALDELRRQMEE 365 (399)
T ss_pred HhhcccccCCCcccceEE-Ec----CCcHH-HHHHHHHHcCCCH--HHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhh
Confidence 58889999988 68 33222 2333444443321 112211 123467888776644444443322211
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccccCCCCC-CcEEEeeccccccceeeeEeee
Q 018323 305 GVAPLTLNLAKPDPIFNDNFMPLTASKDMP-ISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 305 ~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~g~gG~~~~~il~~ 356 (358)
+ + ...+ ....+..+||.|=+..+++|+.
T Consensus 366 ~-~-----------------------~~G~~~d~vll~~fG~Glt~~~~ll~~ 394 (399)
T PLN03171 366 A-A-----------------------AAGAWPELGVMMAFGPGLTVDAMLLHA 394 (399)
T ss_pred c-C-----------------------CCCCCcceEEEEEEcccHHHHHHHhhc
Confidence 0 0 0111 2567778899887777777653
|
|
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=7.1e-14 Score=131.64 Aligned_cols=263 Identities=17% Similarity=0.142 Sum_probs=157.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+++|+++++|+ .++++++++. ..+..+.+|+..||
T Consensus 101 a~~La~~Aa~~AL~~ag~~~~dId-----~lI~~T~Tg~---------------------------~~Ps~a~~l~~~LG 148 (389)
T PLN03168 101 VPKLAAEAAQKAIKEWGGRKSDIT-----HIVFATTSGV---------------------------NMPGADHALAKLLG 148 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCCCC---------------------------CCccHHHHHHHHhC
Confidence 456999999999999999999998 8888887631 12456889999999
Q ss_pred CCCC---ceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCC
Q 018323 94 FQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 170 (358)
Q Consensus 94 l~gp---~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 170 (358)
++.- ++.++.+|++++.+|..|..+|++|....|||+++|.++..+. . +.+ ...+....
T Consensus 149 l~~~~~r~~d~~~gC~g~~~aL~~A~~~i~~~~~~~VLVV~~E~~S~~~~--~--------------~~~--~~~~~~~~ 210 (389)
T PLN03168 149 LKPTVKRVMMYQTGCFGGASVLRVAKDLAENNKGARVLAVASEVTAVTYR--A--------------PSE--NHLDGLVG 210 (389)
T ss_pred cCCcceeeeeeCCccHHHHHHHHHHHHHHHhCCCCEEEEEEEehhhhhcc--C--------------ccc--ccHHHHhc
Confidence 9862 6889999999999999999999999999999999998532110 0 000 00111234
Q ss_pred ceeeecceEEEEeccHHHHHhcCCeeeEEEEeeee--e--cCC---CCCCC-----------CCCChHHHHHHHHHHHHH
Q 018323 171 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGM--S--GDA---HHITQ-----------PHIDGKGAILAMTRALKQ 232 (358)
Q Consensus 171 g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~--~--~~~---~~~~~-----------~~~~~~~~~~~~~~al~~ 232 (358)
..++||||+|+||+..+... ....++ .+..... . +++ ..... |......+...++++++.
T Consensus 211 ~~LFGDGAaAvvl~~~~~~~-~~~~~~-~~~~~~~~~~p~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~~ 288 (389)
T PLN03168 211 SALFGDGAGVYVVGSDPKPE-VEKALF-EVHWAGETILPESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKC 288 (389)
T ss_pred cccccCccEEEEEecCCCCc-cCCcce-EEEeeeeEEEcCCCCccCceEecCceEEEECHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999999998643210 001122 2221110 0 111 01000 111112344566778888
Q ss_pred cCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCccee-cccCCcCCcccchhHHHHHHHHHHHHhCCCCCCC
Q 018323 233 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTL 311 (358)
Q Consensus 233 agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~-~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~ 311 (358)
.++...|++++.+|--|.. =..++.+.++-.. .++..+ .+-..+|++.+||=.+-|-+ ++++.+.+..
T Consensus 289 ~~~~~~d~~~~v~Hqgg~~-----Il~~v~~~Lgl~~--ek~~~s~~vl~~yGNtSSaSv~~vL~~----~~~~~~~~g~ 357 (389)
T PLN03168 289 VGSPDWNEMFWAVHPGGPA-----ILDQVEAKLKLTK--DKMQGSRDILSEFGNMSSASVLFVLDQ----IRQRSVKMGA 357 (389)
T ss_pred cCCCccccceEEecCCcHH-----HHHHHHHHcCCCH--HHHHHHHHHHHHhCccHhhhHHHHHHH----HHHHHhhcCC
Confidence 8888888899999943333 2344444443321 112111 12346788777664444433 3322221100
Q ss_pred CCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 312 NLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
.....+....+..+||-|=+...++|+.
T Consensus 358 -----------------~~~~~g~~~~ll~afGpG~t~~~~llr~ 385 (389)
T PLN03168 358 -----------------STLGEGSEFGFFIGFGPGLTLEVLVLRA 385 (389)
T ss_pred -----------------CCCCCCccEEEEEEEcchhhhhhhhhee
Confidence 0001123567778888887777777764
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.3e-14 Score=132.39 Aligned_cols=224 Identities=13% Similarity=0.091 Sum_probs=140.0
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcCC
Q 018323 15 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 94 (358)
Q Consensus 15 ~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 94 (358)
..|+.+|+++||+++|+++++|+ .+++.++++. . .+..+.+|+..||+
T Consensus 103 ~~La~~Aa~~AL~~ag~~~~dId-----~li~~t~t~~----------------------~-----~P~~a~~l~~~LGl 150 (391)
T PLN03173 103 PKLGKEAAAKAIKEWGQPKSKIT-----HLVFCTTSGV----------------------D-----MPGADYQLTKLLGL 150 (391)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEccCCC----------------------c-----ccHHHHHHHHHhCC
Confidence 47999999999999999998887 7777776521 1 24578899999999
Q ss_pred CCC---ceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCc
Q 018323 95 QGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 171 (358)
Q Consensus 95 ~gp---~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g 171 (358)
+.. .+.+..+|++++.+|..|.++++++..+.|||+++|.++..+. . +.+ +..+.....
T Consensus 151 ~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~~----------~------~~d--~~~~~~v~~ 212 (391)
T PLN03173 151 RSSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFR----------G------PSD--THLDSLVGQ 212 (391)
T ss_pred CccceeeehhcCccHHHHHHHHHHHHHHHhCCCCeEEEEEEehhhhhhC----------C------ccc--cchhhhhhh
Confidence 863 4567999999999999999999999999999999998431110 0 000 001111235
Q ss_pred eeeecceEEEEeccHHHHHhcCC-eeeEEEEeeee----ec----------CCCC--C--CCCCCChHHHHHHHHHHHHH
Q 018323 172 FVIGEGSGVLVLEELEHAKKRGA-KIYAEVRGYGM----SG----------DAHH--I--TQPHIDGKGAILAMTRALKQ 232 (358)
Q Consensus 172 ~~~geGaaa~vL~~~~~A~~~g~-~~~a~i~g~~~----~~----------~~~~--~--~~~~~~~~~~~~~~~~al~~ 232 (358)
.++||||+|+||+..+. .+. .+.-++.+... .+ .|.+ . ..|......+...++++|++
T Consensus 213 ~LFGDGAaAvvl~~~~~---~~~~~~~~~l~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~~~~~i~~~L~~ 289 (391)
T PLN03173 213 ALFGDGAAAIIIGSDPV---LGVEKPLFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKP 289 (391)
T ss_pred hhhcCceEEEEEeCCCC---CCcCCcceEEEeeeeEEecCCccceeeEEEcCceEEEEecHHHHHHHHHHHHHHHHHHHh
Confidence 77999999999986432 111 11112322211 11 1111 0 01111123455678899999
Q ss_pred cCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCccee-cccCCcCCcccchhHHHHHHH
Q 018323 233 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFA 298 (358)
Q Consensus 233 agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~-~~k~~~Gh~~~asG~~~l~~~ 298 (358)
.|+++.|||++.+|--|.. -..++.+.++-.. .++..+ .+-..+|++.++|=.+-|-+.
T Consensus 290 ~gl~~~di~~~v~Hqgg~~-----Il~~v~~~LgL~~--ekl~~s~~vl~~yGNtSSaSv~~vL~~~ 349 (391)
T PLN03173 290 LGISDWNSLFWIAHPGGPA-----ILDQVEAKLALKP--EKLRATRHVLSEYGNMSSACVLFILDEM 349 (391)
T ss_pred cCCCccccCeEEECCCcHH-----HHHHHHHHcCCCh--HHHHHHHHHHHHhCcchhhHHHHHHHHH
Confidence 9999999999999944433 2344445444321 111111 123467887777644444443
|
|
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=99.54 E-value=8.2e-13 Score=124.47 Aligned_cols=214 Identities=14% Similarity=0.099 Sum_probs=137.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+++|+++||+++ ++++|+ .+++++.++.. .....+..|...||
T Consensus 49 ~~~la~~Aa~~aL~~a--~~~~Id-----~li~~t~s~~~--------------------------~~~s~a~~v~~~Lg 95 (379)
T TIGR01835 49 IVTMAASAAKPILDRN--DKQKID-----MVIFGTESGID--------------------------QSKAAAVYVHGLLG 95 (379)
T ss_pred HHHHHHHHHHHHHHhC--CHhhCC-----EEEEEeCCCCC--------------------------CCCCHHHHHHHHhC
Confidence 3689999999999998 677787 78888865321 12346788999999
Q ss_pred CCC--CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCc
Q 018323 94 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 171 (358)
Q Consensus 94 l~g--p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g 171 (358)
+++ +++.+.++|++++.||..|.++|++|..+.+||+++|..... .....-
T Consensus 96 l~~~~~~~dv~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~a~~~---------------------------~~~~~~ 148 (379)
T TIGR01835 96 LQPFCRSFELKQACYGATAALQMAKGHVALSPDRKVLVIASDIAKYG---------------------------LESPGE 148 (379)
T ss_pred CCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCeEEEEEeehhhcc---------------------------cCCCCC
Confidence 974 788999999999999999999999999999999999862000 001122
Q ss_pred eeeecceEEEEeccHHHHHhcCCeeeEEEE-ee-eeecCCCCCCC------CCCCh--------HHHHHHHHHHHHHcCC
Q 018323 172 FVIGEGSGVLVLEELEHAKKRGAKIYAEVR-GY-GMSGDAHHITQ------PHIDG--------KGAILAMTRALKQSGL 235 (358)
Q Consensus 172 ~~~geGaaa~vL~~~~~A~~~g~~~~a~i~-g~-~~~~~~~~~~~------~~~~~--------~~~~~~~~~al~~agl 235 (358)
..+||||+|+||+... .+. .+. +. ....+...... |..++ .....++++.|++.|+
T Consensus 149 ~~~GdGA~A~Ll~~~~-------~i~-~~~~~~~~~t~~~~df~~p~~~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~g~ 220 (379)
T TIGR01835 149 PTQGAGAVAMLVSADP-------KLL-AINEDSVLYTDDIMDFWRPNYSTTALVDGQYSNEQYLNAFENAWNDYAKRTGL 220 (379)
T ss_pred ccccCccEEEEEecCC-------Cee-EEeccceeeecCCCCccCCCCCCceeECcHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4589999999998532 121 111 11 11111111111 11111 2345678889999999
Q ss_pred CCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCC--Ccc-----eecccCCcCCcccchhHHHHHHHH
Q 018323 236 QSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSG--SLA-----FSSTKGAIGHLLGAAGAVEAIFAV 299 (358)
Q Consensus 236 ~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~--~~~-----v~~~k~~~Gh~~~asG~~~l~~~~ 299 (358)
+++|||++.+|-..++. -..++..++....... .+. -...-..+||+.++|=.+.|..++
T Consensus 221 ~~~did~~i~H~p~~~~----~~k~~~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l 287 (379)
T TIGR01835 221 SLADFAAFCFHVPFTKM----GLKALRHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLL 287 (379)
T ss_pred CHHHcCEEEECCCCCcH----HHHHHHHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHH
Confidence 99999999999654443 2333333332211000 000 001233789999888666666554
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.2e-13 Score=120.89 Aligned_cols=191 Identities=17% Similarity=0.208 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||++||+++++++ .+|+|+..+ . ...+..++..+|
T Consensus 56 eseLa~eAa~~ALekAGI~~~DID-----~lI~Gdll~---------------------------Q--~~sAs~vA~~LG 101 (337)
T PRK08304 56 ERKMMEDAIQQALQKANLKKSDID-----YLLAGDLLN---------------------------Q--IISANFAARELG 101 (337)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCCC---------------------------C--cchHHHHHHHhC
Confidence 467999999999999999999998 888875310 0 134557788888
Q ss_pred CCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCc--CCCCc
Q 018323 94 FQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFD--CGRDG 171 (358)
Q Consensus 94 l~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~--~~~~g 171 (358)
+ |.+.|+++|+++..||..|+.+|++|.+|.|||++.+.+........| |.+ |. +....
T Consensus 102 I--Pa~dV~gACST~~~AL~lAa~lI~SG~ad~VLVV~Ssh~s~aerqfr~-------------P~e----yg~qrp~ta 162 (337)
T PRK08304 102 I--PFLGLYGACSTMMESLALGSMLIDGGFADRVLAATSSHFATAERQFRF-------------PTE----YGGQRPPTA 162 (337)
T ss_pred C--cEEEEeccCHHHHHHHHHHHHHHhcCCCCEEEEEEcchhhhhhhhccC-------------chh----ccccCCCcc
Confidence 7 999999999999999999999999999999999999986544321111 111 11 22344
Q ss_pred eeeecceEEEEeccHHHHHhcCCee----eEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecC
Q 018323 172 FVIGEGSGVLVLEELEHAKKRGAKI----YAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHA 247 (358)
Q Consensus 172 ~~~geGaaa~vL~~~~~A~~~g~~~----~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~ 247 (358)
...++||+|+||.+.. .+.++ .++|..++.. |+.... ....++....|.+-|++.|.+|+|-|.|..-.
T Consensus 163 qwtvtGAGA~i~~~~~----~~~~i~~~t~Gkv~D~g~~-d~~nmg--aaMapAa~dti~~h~~d~~~~~~~yDli~tGD 235 (337)
T PRK08304 163 QWTVTGAGAVLLSREG----SGPRITHATIGKVVDLGIK-DPNDMG--AAMAPAAADTIQQHFKDTGRSPEDYDLIVTGD 235 (337)
T ss_pred eEEeeccEEEEEecCC----CCceEEEEeEEEEEecCCC-Ccccch--hhhhHHHHHHHHHHHHHcCCChhhccEEEEcc
Confidence 5688999999998642 12222 1233433332 111111 11235566788999999999999999999864
Q ss_pred CCCCCCcHHHHHHHHHHhhccc
Q 018323 248 TSTPLGDTVEATAIRTVFSDHA 269 (358)
Q Consensus 248 ~gt~~~d~~E~~a~~~~~~~~~ 269 (358)
.|.. -...+.+++.++.
T Consensus 236 lg~v-----G~~i~~~ll~~~g 252 (337)
T PRK08304 236 LGRV-----GREILKELLKEEG 252 (337)
T ss_pred hHHH-----HHHHHHHHHHHhC
Confidence 4422 2334555554443
|
|
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.7e-12 Score=124.40 Aligned_cols=118 Identities=16% Similarity=0.095 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
.......++.++|+++|+++++|+ .+++.++ +. ...+..+..|...+|
T Consensus 188 a~~v~~~~~~~lL~kaGi~p~dID-----~LIv~cS-~~--------------------------~p~PSlAa~I~n~LG 235 (521)
T PLN02854 188 AEAVMFGALDSLFSKTGVKPRDIG-----ILIVNCS-LF--------------------------NPTPSLSAMIVNHYK 235 (521)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECC-CC--------------------------CCCCCHHHHHHHHhC
Confidence 345677789999999999998887 6666433 11 123567889999999
Q ss_pred CC-C-Cceecc-CCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCC
Q 018323 94 FQ-G-PNHAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 170 (358)
Q Consensus 94 l~-g-p~~~v~-~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 170 (358)
++ . .++.++ .||++++.+|..|.++|+++....+||+++|.++ ..+. +-+.+..
T Consensus 236 lr~~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~S--~~~y---------------------~g~Drs~ 292 (521)
T PLN02854 236 LRTDIKSYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTENIT--LNWY---------------------FGNDRSM 292 (521)
T ss_pred CCCCceEEecccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeeee--cCCC---------------------CCCchhh
Confidence 98 4 688898 7999999999999999999999999999999853 1100 0011122
Q ss_pred ---ceeeecceEEEEeccH
Q 018323 171 ---GFVIGEGSGVLVLEEL 186 (358)
Q Consensus 171 ---g~~~geGaaa~vL~~~ 186 (358)
...+||||+|+||++.
T Consensus 293 lv~~~LFgDGAAAvlLs~~ 311 (521)
T PLN02854 293 LLCNCIFRMGGAAVLLSNK 311 (521)
T ss_pred hcceeeeccceeEEEEecc
Confidence 4678999999999874
|
|
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.6e-12 Score=123.19 Aligned_cols=117 Identities=17% Similarity=0.179 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...++..|+++||+++|+++++|+ .+++ ++++. ...+..+..|...||
T Consensus 172 a~~l~~~A~~~aL~kaGi~p~dID-----~LVv-~cS~~--------------------------~~~PSlaa~V~~~LG 219 (502)
T PLN02377 172 AEQVMFGALDNLFANTNVNPKDIG-----ILVV-NCSLF--------------------------NPTPSLSAMIVNKYK 219 (502)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEE-ECCCC--------------------------CCCCcHHHHHHHHhC
Confidence 456999999999999999998886 5655 44321 123567889999999
Q ss_pred CCC--Cceecc-CCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCC
Q 018323 94 FQG--PNHAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 170 (358)
Q Consensus 94 l~g--p~~~v~-~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 170 (358)
++. .++.++ .||++++.+|..|.++|+++....|||+++|..+..+. ++.++.
T Consensus 220 lr~~v~afdL~gmGCsggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~~------------------------~~d~~s 275 (502)
T PLN02377 220 LRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVVSTENITQNWY------------------------FGNKKS 275 (502)
T ss_pred CCCCCeEEecccchhhHHHHHHHHHHHHHHcCCCCEEEEEEEeccccccC------------------------CCCCcc
Confidence 984 788999 69999999999999999999999999999998432211 122222
Q ss_pred ----ceeeecceEEEEeccH
Q 018323 171 ----GFVIGEGSGVLVLEEL 186 (358)
Q Consensus 171 ----g~~~geGaaa~vL~~~ 186 (358)
...++|||+|+||++.
T Consensus 276 ~lv~n~LFgDGAaAvlLs~~ 295 (502)
T PLN02377 276 MLIPNCLFRVGGSAVLLSNK 295 (502)
T ss_pred ccccceeeccccEEEEEecc
Confidence 3678999999999863
|
|
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.7e-13 Score=105.61 Aligned_cols=119 Identities=26% Similarity=0.365 Sum_probs=89.0
Q ss_pred eeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCC-CC
Q 018323 195 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS-GS 273 (358)
Q Consensus 195 ~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~-~~ 273 (358)
+|+++|.++..... .|.....+...+++++|+++|++++|||++|+| |+++...+...+..+ .+
T Consensus 2 ~pla~i~~~~~~~~-----~P~~~~~~p~~A~~~al~~ag~~~~did~~Ei~----------EaFA~~~l~~~~~lg~~~ 66 (123)
T PF02803_consen 2 KPLARIVGYASAGV-----DPEDMGLGPVPAARKALERAGLTPDDIDVIEIN----------EAFAAQVLAFLEALGLDP 66 (123)
T ss_dssp -ESEEEEEEEEEE-------GGGGGGTHHHHHHHHHHHHT--GGGESEEEE------------SBHHHHHHHHHHHTTGG
T ss_pred CeEEEEEEEEEEec-----CHHHhCchHHHHHHHHHHHhCCCccccchhhcc----------chhhhHHHHhhccccccc
Confidence 57899999887662 455555667789999999999999999999999 888887775543322 23
Q ss_pred cceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceee
Q 018323 274 LAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNAS 351 (358)
Q Consensus 274 ~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~ 351 (358)
.++|...+ .+|||.+|||+..++.++.+|+.+ ..++.+....+-||...+
T Consensus 67 ~~vN~~GG~la~GHP~gasG~r~~~~l~~~L~~~----------------------------~~~~gla~~~~ggG~g~a 118 (123)
T PF02803_consen 67 EKVNPNGGALALGHPLGASGARLVVELAHQLRRR----------------------------GGRYGLAAICAGGGQGSA 118 (123)
T ss_dssp GGBSTT--HHHH-BHTTTHHHHHHHHHHHHHHHH----------------------------TTSEEEEEEEETTTEEEE
T ss_pred cccCcccccccccccccccccchhhhhHHHHHHh----------------------------chhhhhHHhcccceeeEE
Confidence 57777777 679999999999999999999762 146788889999999999
Q ss_pred eEeee
Q 018323 352 LLFTK 356 (358)
Q Consensus 352 ~il~~ 356 (358)
+||||
T Consensus 119 ~ller 123 (123)
T PF02803_consen 119 VLLER 123 (123)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 99987
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.7e-11 Score=109.39 Aligned_cols=217 Identities=19% Similarity=0.204 Sum_probs=149.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
..-|+++|++++|.++++++.+|. .|++|+.++.... . ..+..|+..||
T Consensus 51 ~vTmaveAA~~~l~r~~~D~~~Ig-----~v~vgTES~~d~~----------------K----------~~at~v~~~lg 99 (377)
T COG3425 51 AVTMAVEAARNALKRADIDPSKIG-----AVIVGSESGPDAV----------------K----------PTATIVAEALG 99 (377)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCc-----eEEEecCCCcccc----------------c----------chHHHHHHHhC
Confidence 456999999999999999887776 7999987644321 1 34678899999
Q ss_pred CCCCc--eeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCc
Q 018323 94 FQGPN--HAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 171 (358)
Q Consensus 94 l~gp~--~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g 171 (358)
+..-. +.+..+|-+|..||..|..+|.+|..+.+||++.|..... +.. .--
T Consensus 100 ~~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~~-------------------~~~--------~~E 152 (377)
T COG3425 100 LNPSARAADVEFACYAGTAALQAAIGWVESGMISYGLVIGADTAQYA-------------------PGD--------ALE 152 (377)
T ss_pred CCCceehhhHHHHHHHHHHHHHHHHHHHHcCCccceEEEeehhhccC-------------------CCc--------ccC
Confidence 98643 4477899999999999999999999999999999973111 111 222
Q ss_pred eeeecceEEEEeccHHHHHhcCCeeeEEEEeeee-ecCCCCCCCCC----C--C--------hHHHHHHHHHHHHHcCCC
Q 018323 172 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGM-SGDAHHITQPH----I--D--------GKGAILAMTRALKQSGLQ 236 (358)
Q Consensus 172 ~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~-~~~~~~~~~~~----~--~--------~~~~~~~~~~al~~agl~ 236 (358)
+.-|.|++|+|+... ..+.+.+.+.+. ..|-.....|. + . ......+++..+++.|++
T Consensus 153 ~t~GAGavA~lIg~n-------~~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls 225 (377)
T COG3425 153 YTAGAGAVAFLIGKN-------PPIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLS 225 (377)
T ss_pred ccCCCceEEEEEccC-------CCeEEEecCceEEecCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCCC
Confidence 447899999999852 233344444333 22322111111 1 1 144567888899999999
Q ss_pred CCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHH
Q 018323 237 SHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLA 301 (358)
Q Consensus 237 ~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~ 301 (358)
++|.|++..|-+-+.+ =..+.+.+..... .-.|--.....+|++..+|..++|+.++..
T Consensus 226 ~~dfdy~vfH~P~~k~----~~ka~k~l~~~~e--~v~~~l~~~~~vGN~YtgS~~L~Las~L~~ 284 (377)
T COG3425 226 PDDFDYIVFHQPNGKF----PKKAAKSLGFKEE--QVKPGLVYPQRIGNTYTGSLLLGLASLLDN 284 (377)
T ss_pred hhhhCeEEecCCCCch----HHHHHHHhCccHh--hcCccchhhhhcCcccchhHHHHHHHHHhh
Confidence 9999999999776665 4555555543311 111112222378999999999999887744
|
|
| >PLN02577 hydroxymethylglutaryl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.38 E-value=2e-11 Score=116.12 Aligned_cols=175 Identities=15% Similarity=0.165 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHH---
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVS--- 89 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia--- 89 (358)
....|++.|+++||+++|+++++|+ .|+++|.++... .+..+..|.
T Consensus 52 d~~tmA~~AA~~aL~~agid~~~Id-----llivaTeT~~d~--------------------------~ps~A~~v~~ll 100 (459)
T PLN02577 52 DVISMSLTVVKSLLEKYNIDPKQIG-----RLEVGSETVIDK--------------------------SKSIKTFLMQLF 100 (459)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCCCC--------------------------CCchHHHHHHHH
Confidence 3568999999999999999999898 899998763211 134455554
Q ss_pred HHcCCCC-CceeccCCchhHHHHHHHHHHHHHcCCC--CEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCc
Q 018323 90 MKYGFQG-PNHAAVTACATGAHSIGDAARMIQFGDS--DVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFD 166 (358)
Q Consensus 90 ~~lgl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~--d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~ 166 (358)
..+|.+. +++.+..+|.+++.||..|..+|++|.. +.+||+++|...... ...+
T Consensus 101 ~~LG~~~~~afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~~~--------------------~~~e--- 157 (459)
T PLN02577 101 EESGNTDIEGVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAVYAE--------------------GPAR--- 157 (459)
T ss_pred HHhCCCCcEEeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhhccC--------------------CCCC---
Confidence 5667765 7889999999999999999999999975 999999999731110 0001
Q ss_pred CCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCC-------CCh--------HHHHHHHHHHHH
Q 018323 167 CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPH-------IDG--------KGAILAMTRALK 231 (358)
Q Consensus 167 ~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~-------~~~--------~~~~~~~~~al~ 231 (358)
...||||+|+||+..+. . .+-....|... .+......|. .++ ..+..++++.++
T Consensus 158 -----~t~GdGA~A~lv~~~~~----~-~l~~~~~g~~~-~~~~Df~rP~~~~~~~~vdG~~s~~~yl~~~~~~~~~~~~ 226 (459)
T PLN02577 158 -----PTGGAGAVAMLVGPNAP----I-VFESKYRGSHM-AHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYKRFCE 226 (459)
T ss_pred -----CCCCcceEEEEEccCCC----c-eeecccccccC-cccchhcccCCCCCceEEcchHHHHHHHHHHHHHHHHHHH
Confidence 12399999999985321 0 01001111111 1111111221 111 223345555666
Q ss_pred Hc------CCCCCCccEEEecCCCCCC
Q 018323 232 QS------GLQSHQVDYVNAHATSTPL 252 (358)
Q Consensus 232 ~a------gl~~~did~i~~h~~gt~~ 252 (358)
+. |++++|+|++..|-..+.+
T Consensus 227 k~~~~~~~g~~~~d~d~~vfHqP~~km 253 (459)
T PLN02577 227 KYEKLEGKQFSISDADYFVFHAPYNKL 253 (459)
T ss_pred HhhcccccCCCHHHcCEEEecCCccch
Confidence 65 8899999999999776665
|
|
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.4e-11 Score=117.43 Aligned_cols=122 Identities=15% Similarity=0.159 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...++..|+++||+++|+++++|+ .+++.++++. ..+..+..|...+|
T Consensus 148 a~~la~~Aa~~aL~~agi~p~dId-----~lIv~tst~~---------------------------~~Pslaa~V~~~lG 195 (478)
T PLN02932 148 TEEVIIGAVDNLFRNTGISPSDIG-----ILVVNSSTFN---------------------------PTPSLSSILVNKFK 195 (478)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEccCCC---------------------------CCCcHHHHHHHHhC
Confidence 457999999999999999999887 7778776521 23567889999999
Q ss_pred CC-C-Cceecc-CCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCC
Q 018323 94 FQ-G-PNHAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 170 (358)
Q Consensus 94 l~-g-p~~~v~-~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 170 (358)
++ . .++.++ .||++++.+|..|.++|+++....|||+++|.++....+ .+ . -+..-.
T Consensus 196 lr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~~~-----------------~d-~--r~~l~t 255 (478)
T PLN02932 196 LRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENITQNLYL-----------------GN-N--KSMLVT 255 (478)
T ss_pred CCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeecccccCC-----------------Cc-c--hhhhcc
Confidence 97 3 789999 899999999999999999999999999999985332210 00 0 000124
Q ss_pred ceeeecceEEEEeccHH
Q 018323 171 GFVIGEGSGVLVLEELE 187 (358)
Q Consensus 171 g~~~geGaaa~vL~~~~ 187 (358)
...++|||+|+||++.+
T Consensus 256 ~~LFgDGAAAvlLs~~~ 272 (478)
T PLN02932 256 NCLFRIGGAAILLSNRS 272 (478)
T ss_pred ceeecccceEEEEeccc
Confidence 57789999999999744
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.3e-11 Score=108.42 Aligned_cols=193 Identities=14% Similarity=0.192 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||++||+++++++ .+|+|+..+. ..++..++..||
T Consensus 54 E~~L~~EA~~~AL~kAGI~~~DID-----~i~vGdL~nQ-----------------------------~ipssfvar~LG 99 (334)
T PRK12404 54 ERKLLEEACSRAIEKAKLRKEDIQ-----FFLAGDLMNQ-----------------------------ITPTSFAARTLG 99 (334)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCC-----------------------------cCcHHHHHHHhC
Confidence 356999999999999999999998 8888875411 123346788888
Q ss_pred CCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCcee
Q 018323 94 FQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFV 173 (358)
Q Consensus 94 l~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g~~ 173 (358)
+ |.+.|.++|+++..||..|+.+|++|.+|.|||+....+.+......|.. .-+..||. ..-.
T Consensus 100 I--P~~gV~gACSTg~eAL~lAa~~VaSG~Ad~VLavtsSH~~~aErqfR~P~-----------eyG~Qrp~----taqw 162 (334)
T PRK12404 100 I--PYLGLFGACSTSMEGLALAALIVNSGGAKYVLTGASSHNAAVEKQFRYPT-----------EYGGQKPP----TAQW 162 (334)
T ss_pred C--CccceeecCHHHHHHHHHHHHHHHcCCCCEEEEEeCcccchhhhhccCcc-----------cccCcCCC----cccE
Confidence 5 78999999999999999999999999999999998877544433222110 01122332 2223
Q ss_pred eecceEEEEeccHHHHHhcCCee----eEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 018323 174 IGEGSGVLVLEELEHAKKRGAKI----YAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATS 249 (358)
Q Consensus 174 ~geGaaa~vL~~~~~A~~~g~~~----~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~g 249 (358)
..-|++++||.+.. .+-++ .++|..++.. |+.... ..+.++....|.+-|++.|.+|+|-|.|..-..|
T Consensus 163 TvTgaga~~l~~~~----~~~~i~~~T~Gkv~D~g~~-d~~nMG--aaMAPAA~dti~~h~~d~~~~~~~yDlI~TGDLg 235 (334)
T PRK12404 163 TVTGAGAAILSKTG----DGPRVTSATIGRVVDMGLT-DPFNMG--GAMAPAAVDTIEAHLRDRQIDASYYDLIVTGDLG 235 (334)
T ss_pred EEEceEEEEEecCC----CCceEEEEEEEEEEecCCC-Ccccch--hhhhHHHHHHHHHHHHHhCCChhhccEEEEcchH
Confidence 45678888887532 12122 1334444432 111111 1123556678899999999999999999986444
Q ss_pred CCCCcHHHHHHHHHHhhccc
Q 018323 250 TPLGDTVEATAIRTVFSDHA 269 (358)
Q Consensus 250 t~~~d~~E~~a~~~~~~~~~ 269 (358)
.. -...+.+++.++.
T Consensus 236 ~v-----G~~i~~~ll~~~g 250 (334)
T PRK12404 236 HV-----GREIAKDLLHKHG 250 (334)
T ss_pred HH-----HHHHHHHHHHHcC
Confidence 22 2344566665443
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.29 E-value=7e-11 Score=113.20 Aligned_cols=117 Identities=19% Similarity=0.185 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...+...|+++||+++|+++++|| -+++.++. ....+..+..|...+|
T Consensus 176 a~~~~~~Aa~~aL~kaGi~p~DID-----iLIv~~S~---------------------------~~~~PSlaa~I~n~lG 223 (511)
T PLN02192 176 AETVMFGAIDQLLAKTSVKPKDIG-----ILIVNCSL---------------------------FNPTPSLSAMVINHYK 223 (511)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCC---------------------------CCCCchHHHHHHHHhC
Confidence 346889999999999999998886 66665432 1123577889999999
Q ss_pred CCC--Cceecc-CCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCC
Q 018323 94 FQG--PNHAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 170 (358)
Q Consensus 94 l~g--p~~~v~-~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 170 (358)
++. .++.++ .||++++.+|..|.++|+++....+||+++|.++ ..+. ++.+++
T Consensus 224 lr~~i~afdLsgmGCSggl~aLdlA~~lL~a~~~~~aLVVstE~~S--~n~y----------------------~g~drs 279 (511)
T PLN02192 224 LRGNILSYNLGGMGCSAGLISIDLAKHLLQVHPNSYALVISMENIT--LNWY----------------------FGNDRS 279 (511)
T ss_pred CCCCceEEEcccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEEecc--ccCC----------------------CCCCHH
Confidence 984 789999 6999999999999999999999999999999854 1110 011111
Q ss_pred c----eeeecceEEEEeccH
Q 018323 171 G----FVIGEGSGVLVLEEL 186 (358)
Q Consensus 171 g----~~~geGaaa~vL~~~ 186 (358)
- ..+||||+|+||++.
T Consensus 280 ~lv~n~LFgDGAaAvLLs~~ 299 (511)
T PLN02192 280 MLVSNCLFRMGGAAILLSNK 299 (511)
T ss_pred HHhccccccccceEEEEecc
Confidence 1 458999999999874
|
|
| >TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.4e-09 Score=103.57 Aligned_cols=91 Identities=10% Similarity=0.076 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|++.|++++|+++++++++|+ .|+++|.++... .+..+..|...|
T Consensus 49 d~~tma~~AA~~lL~~a~id~~~Id-----~Liv~TeS~~d~--------------------------sps~a~~v~~lL 97 (454)
T TIGR01833 49 DINSLCLTVVSKLMERYNIDYNQIG-----RLEVGTETIIDK--------------------------SKSVKTVLMQLF 97 (454)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCCCCCC--------------------------CCchHHHHHHHH
Confidence 4567999999999999999998887 888888764321 234566677755
Q ss_pred ---CCCC-CceeccCCchhHHHHHHHHHHHHHcCC--CCEEEEeecCC
Q 018323 93 ---GFQG-PNHAAVTACATGAHSIGDAARMIQFGD--SDVMVAGGTES 134 (358)
Q Consensus 93 ---gl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~--~d~vlv~g~e~ 134 (358)
|.+. .++.+..+|.++..||..|..+|++|. .+.+||+++|.
T Consensus 98 ~~lG~~~~~~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDi 145 (454)
T TIGR01833 98 EESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDI 145 (454)
T ss_pred HhcCCCCceEEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEecc
Confidence 4444 678899999999999999999999996 48999999997
|
Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes. |
| >PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=99.16 E-value=9e-10 Score=94.53 Aligned_cols=122 Identities=20% Similarity=0.233 Sum_probs=109.4
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 82 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (358)
+|+.+.|||++..+|++.++.+++++. .+++ .+|+++..|+.....+..+.+.+.+ .++|..|..++.|
T Consensus 23 lp~m~rRRls~~~rla~~~a~~~~~~~----~~~d-----~~VfaS~~Gel~~t~~ll~~l~~~~--~lSPT~Fs~SVHN 91 (218)
T PF13723_consen 23 LPPMQRRRLSRLSRLALEAALECLAED----EQPD-----AIVFASRHGELERTFKLLEALAEEE--ELSPTAFSQSVHN 91 (218)
T ss_pred CCHHHHcccCHHHHHHHHHHHHHHhcc----CCCC-----cEEEEeCCCcHHHHHHHHHHHHhCC--CcCccchhhhhhh
Confidence 688899999999999999999998653 1222 7899999999999999999988754 5999999999999
Q ss_pred HHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCc
Q 018323 83 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSI 136 (358)
Q Consensus 83 ~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~ 136 (358)
++++++++..+.++|+.++..+-.+...||..|+..+..| .+.||++..|...
T Consensus 92 A~aG~~sI~~~~~~~~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~ 144 (218)
T PF13723_consen 92 AAAGYWSIATKNTGPNTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPL 144 (218)
T ss_pred HHHHHHHHHhCCCCceEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCC
Confidence 9999999999999999999999999999999999999999 8888888888744
|
|
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.5e-10 Score=98.85 Aligned_cols=188 Identities=14% Similarity=0.169 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...+.+++.++||+++++.+++++ .|++.+++| ...+.+-.+|...||
T Consensus 76 a~~l~v~a~r~aL~~~~l~pedId-----~vv~vtsTG---------------------------~~~Ps~dari~~~Lg 123 (356)
T COG3424 76 AVPLGVDALRRALDGSPLRPEDID-----AVVTVTSTG---------------------------LATPSLDARIVGELG 123 (356)
T ss_pred HHHHHHHHHHHHhccCCCCHHHCc-----EEEEEeecc---------------------------ccCCChhHHHHhhcC
Confidence 345889999999999999998887 777777653 223445568999999
Q ss_pred CCCCcee---ccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCC
Q 018323 94 FQGPNHA---AVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 170 (358)
Q Consensus 94 l~gp~~~---v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 170 (358)
|+.-... -.-||+.+..+|..|+++.++.-...|||+.+|.++-.+. +.|....
T Consensus 124 l~p~~~Rvpv~glGCaaga~glara~~y~ra~P~~~vlvV~vELCSLt~~-----------------------~~d~t~s 180 (356)
T COG3424 124 LSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPDANVLVVCVELCSLTYV-----------------------FADDTKS 180 (356)
T ss_pred CCCccceeeeecchhhhhhhHHHHHHHHHhhCccceEEEEEeeeeeeeee-----------------------cCCCCcc
Confidence 9853333 3459999999999999999999999999999998532211 0111221
Q ss_pred ----ceeeecceEEEEeccHHHHHhc-CCee--e----------EEEEeeeeecCCCCC----CCCCCChHHHHHHHHHH
Q 018323 171 ----GFVIGEGSGVLVLEELEHAKKR-GAKI--Y----------AEVRGYGMSGDAHHI----TQPHIDGKGAILAMTRA 229 (358)
Q Consensus 171 ----g~~~geGaaa~vL~~~~~A~~~-g~~~--~----------a~i~g~~~~~~~~~~----~~~~~~~~~~~~~~~~a 229 (358)
.-.++||++|+|+.-...+... ...+ + -.+.|+....+|.+. ..|..-...+...+...
T Consensus 181 ~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~StL~~dse~~Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~V~~f 260 (356)
T COG3424 181 NLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPDSEDIMGWDVGDQGLKVVLSRDLPNLIESYLAPNVTTF 260 (356)
T ss_pred cceeeeeecCCeeEEEEeccccccccCCCCceecccccccCCccccccceeecCCcEEEEEcCchhHHHHHHhhhhHHHH
Confidence 2348999999999863332211 1111 0 123444454444331 11222223455678889
Q ss_pred HHHcCCCCCCccEEEecCCCCCCCcHH
Q 018323 230 LKQSGLQSHQVDYVNAHATSTPLGDTV 256 (358)
Q Consensus 230 l~~agl~~~did~i~~h~~gt~~~d~~ 256 (358)
|...|++.+||+.+..|=-|-+.-|+.
T Consensus 261 L~~~~ls~~dI~~w~~HPGG~KVida~ 287 (356)
T COG3424 261 LATHGLSIEDIEAWVVHPGGPKVIDAY 287 (356)
T ss_pred HHHcCCchhhhceeeeCCCCchHHHHH
Confidence 999999999999999996555544443
|
|
| >PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.1e-10 Score=104.60 Aligned_cols=96 Identities=27% Similarity=0.306 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
+...|+.++++++|+++++++++++ .|++|+..+... ...++..++...
T Consensus 25 ~~~~L~~~a~~~al~~~~i~~~~Id-----~v~~G~~~~~~~--------------------------g~~~ar~~~l~a 73 (264)
T PF00108_consen 25 SPEDLAAEAVKAALERAGIDPEDID-----AVIVGNVLQEGE--------------------------GQNIARQAALAA 73 (264)
T ss_dssp -HHHHHHHHHHHHHHHHTSHGGGEE-----EEEEE-SSSCTT--------------------------TCHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHhcccchhhhh-----hcCccccccccc--------------------------chhhhhhhhhhc
Confidence 3568999999999999999998888 899998653211 234556677778
Q ss_pred CCC-C-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChH
Q 018323 93 GFQ-G-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDAL 139 (358)
Q Consensus 93 gl~-g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~ 139 (358)
|+. . |.++|+..|+||+.||..|++.|++|++|++|++|+|+++..+
T Consensus 74 Gl~~~vp~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~mS~~p 122 (264)
T PF00108_consen 74 GLPESVPATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVESMSRVP 122 (264)
T ss_dssp TS-TTSEEEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEETTTSC
T ss_pred ccccccceeeehhhhhHHHHHHHHhhhhhcCCCccEEEEeccccccccc
Confidence 885 3 8999999999999999999999999999999999999975544
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B .... |
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.88 E-value=8.8e-09 Score=97.42 Aligned_cols=122 Identities=14% Similarity=0.130 Sum_probs=86.6
Q ss_pred HHHHHHH-HHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 14 FIAYALC-AADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 14 ~~~l~~~-aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
..+|++. |+++||+++|+++++|+ -+++.+ ++. ...+..+.+|...+
T Consensus 133 e~em~i~~A~~~aL~~aGi~p~dID-----~LIvs~-T~~--------------------------~~~Pslaa~l~~~L 180 (466)
T PLN00415 133 ESELVIFGALNSLFKKTGIEPREVG-----IFIVNC-SLF--------------------------NPNPSLSSMIVNRY 180 (466)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEC-cCC--------------------------CCCchHHHHHHHHh
Confidence 4455555 77788899999998886 555433 211 11256678899999
Q ss_pred CCC-C-CceeccC-CchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCC
Q 018323 93 GFQ-G-PNHAAVT-ACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 169 (358)
Q Consensus 93 gl~-g-p~~~v~~-~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 169 (358)
|++ . ..+.++. ||++++.+|..|.++++++....+||+++|.++.... .. .+ + +.--
T Consensus 181 GLr~~v~~~dL~gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~-~~---------------~d--r--~~lv 240 (466)
T PLN00415 181 KLKTDVKTYNLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSMY-RG---------------ND--R--SMLV 240 (466)
T ss_pred CCCCCceEEEeccccchHHHHHHHHHHHHHHhCCCCEEEEEEEeccccccc-CC---------------Cc--H--hHhc
Confidence 998 3 5778987 9999999999999999999999999999998432110 00 00 0 0000
Q ss_pred CceeeecceEEEEeccHH
Q 018323 170 DGFVIGEGSGVLVLEELE 187 (358)
Q Consensus 170 ~g~~~geGaaa~vL~~~~ 187 (358)
....+||||+|+||++..
T Consensus 241 ~n~LFgDGAAAvlLs~~~ 258 (466)
T PLN00415 241 PNCLFRVGGAAVMLSNRS 258 (466)
T ss_pred cceeecccceEEEEecCc
Confidence 135689999999999743
|
|
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.6e-08 Score=89.55 Aligned_cols=123 Identities=16% Similarity=0.149 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...+...++.++|+++|++|++|+ .+++.++.+ ...+.+++.|.++||
T Consensus 83 ae~v~f~av~~LL~ktgv~p~dId-----iLVvncs~f---------------------------~ptPSLsamIvnr~~ 130 (290)
T PF08392_consen 83 AEMVIFGAVDDLLAKTGVKPSDID-----ILVVNCSLF---------------------------NPTPSLSAMIVNRYG 130 (290)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECcCC---------------------------CcCCcHHHHHHHHhC
Confidence 445788999999999999999887 777777652 122467889999999
Q ss_pred CCCC--ceecc-CCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCC
Q 018323 94 FQGP--NHAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 170 (358)
Q Consensus 94 l~gp--~~~v~-~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 170 (358)
++.- ++.++ .||++|+.+|..|.++++.-.-..+||+++|..+.. .+.+.+..-.+ .
T Consensus 131 mr~di~~~nLsGMGCsAgliai~lA~~lL~~~p~~~ALVVstE~~s~~-~Y~G~~rsmlv-------------------~ 190 (290)
T PF08392_consen 131 MRSDIKSYNLSGMGCSAGLIAIDLAKDLLQAHPNSYALVVSTENISAN-WYRGNDRSMLV-------------------S 190 (290)
T ss_pred CCcCeeeecccCCcchhhHHHHHHHHHHHHhCCCcEEEEEEEeecccc-cccCCcHHHhh-------------------c
Confidence 9974 44544 489999999999999999999889999999985433 22222222221 2
Q ss_pred ceeeecceEEEEeccHHH
Q 018323 171 GFVIGEGSGVLVLEELEH 188 (358)
Q Consensus 171 g~~~geGaaa~vL~~~~~ 188 (358)
..++.+|++|++|.+...
T Consensus 191 NcLFr~GgAAvLLSn~~~ 208 (290)
T PF08392_consen 191 NCLFRMGGAAVLLSNKPS 208 (290)
T ss_pred cccccCCceeEEeecCcc
Confidence 255889999999997654
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.2e-08 Score=87.94 Aligned_cols=91 Identities=20% Similarity=0.128 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+++|+++++|+ .+|+.+++| +..+.+-.+|...||
T Consensus 100 a~~L~~~Aa~~AL~~~g~~~~dIt-----hlv~vs~TG---------------------------~~~PglD~~l~~~Lg 147 (226)
T PF00195_consen 100 APPLAEEAARKALAEAGLDPSDIT-----HLVTVSCTG---------------------------IAAPGLDARLINRLG 147 (226)
T ss_dssp HHHHHHHHHHHHHHHHTS-GGGEC-----EEEEEESSS---------------------------SECS-HHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCCcccc-----eEEEEecCC---------------------------cCCCchhHHHHhcCC
Confidence 456999999999999999988776 777777653 233456678999999
Q ss_pred CCCCcee---ccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCc
Q 018323 94 FQGPNHA---AVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSI 136 (358)
Q Consensus 94 l~gp~~~---v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~ 136 (358)
|+..... ...||.+|..+|..|....++..-..|||+.+|.++
T Consensus 148 L~~~v~R~~i~~~GC~gg~~~L~~A~~~~~~~p~a~VLvv~vElcs 193 (226)
T PF00195_consen 148 LRPDVQRTPIFGMGCAGGAAGLRRAKDIARANPGARVLVVCVELCS 193 (226)
T ss_dssp --TTSEEEEEES-GGGHHHHHHHHHHHHHHHSTT-EEEEEEEEEGG
T ss_pred CCCCcEEEEEeccchhhHHHHHHHHHHHHhCCccceEEEEEEEeeE
Confidence 9864332 456999999999999999999988999999999754
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.1e-08 Score=74.04 Aligned_cols=64 Identities=20% Similarity=0.264 Sum_probs=48.0
Q ss_pred eeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCceeeecce
Q 018323 99 HAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGS 178 (358)
Q Consensus 99 ~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g~~~geGa 178 (358)
|.|+++|++.+.||..|..+|++|.++.+||++.|....... +......+++||||
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~~~~------------------------~~~~~~~~~~gDgA 56 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSRIVD------------------------RTDRQTAFIFGDGA 56 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGGGSH------------------------TTHHHHHTTB-EEE
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeecccccccc------------------------ccccCcceeecchh
Confidence 467899999999999999999999999999999998533111 00112335699999
Q ss_pred EEEEeccH
Q 018323 179 GVLVLEEL 186 (358)
Q Consensus 179 aa~vL~~~ 186 (358)
+|+||++.
T Consensus 57 aA~vl~~~ 64 (80)
T PF08545_consen 57 AAVVLSRD 64 (80)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEec
Confidence 99999985
|
The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. |
| >PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long | Back alignment and domain information |
|---|
Probab=98.38 E-value=6.3e-06 Score=72.83 Aligned_cols=191 Identities=18% Similarity=0.169 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
..+|..+|+..||+++++++++++ -++-|--... ...++..+..|+
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId-----~~~aGDLlnQ-----------------------------~i~s~f~ar~l~ 96 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDID-----YLFAGDLLNQ-----------------------------IISSSFAARDLG 96 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-S-----EEEEEETTCC-----------------------------CCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCe-----EEEehhhhhh-----------------------------hHHHHHHHHhcC
Confidence 457999999999999999988775 4444432211 123445666676
Q ss_pred CCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCcee
Q 018323 94 FQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFV 173 (358)
Q Consensus 94 l~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g~~ 173 (358)
+ |-+-+..+|++...+|.+|..+|..|-+|.+|++.+..+.+......|... -+..|| ...-.
T Consensus 97 i--Pf~GlygACST~~e~l~laa~~vdgg~a~~vla~tSSH~~tAERQfR~P~E-----------yG~Qrp----~tAqw 159 (329)
T PF07451_consen 97 I--PFLGLYGACSTMMESLALAAMLVDGGFADYVLAATSSHFATAERQFRFPTE-----------YGGQRP----PTAQW 159 (329)
T ss_dssp ----EEEB--CCCHHHHHHHHHHHHHHTTS-SEEEEEEEE-CCHHHHHT---GG-----------GT--------TT--E
T ss_pred C--CccchhhHHHHHHHHHHHHHHHHhCCCcceEEEEeccccchhhhhccCchh-----------ccCCCC----CcccE
Confidence 6 888899999999999999999999999999999988775544432222110 011222 12233
Q ss_pred eecceEEEEeccHHHHHhcCCeeeEEEEeee--eecCCCCCCCCCCCh----HHHHHHHHHHHHHcCCCCCCccEEEecC
Q 018323 174 IGEGSGVLVLEELEHAKKRGAKIYAEVRGYG--MSGDAHHITQPHIDG----KGAILAMTRALKQSGLQSHQVDYVNAHA 247 (358)
Q Consensus 174 ~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~--~~~~~~~~~~~~~~~----~~~~~~~~~al~~agl~~~did~i~~h~ 247 (358)
..-|++|+||.+... .|+ |.+.- -.-| .....|...+ ++....|.+-|++.|.+|+|-|.|..-.
T Consensus 160 TVTGaGa~il~~~~~------~p~--It~~T~GkVvD-~G~~D~~nMGaAMAPAA~dTI~~h~~D~g~~p~dYDlIvTGD 230 (329)
T PF07451_consen 160 TVTGAGAAILSKEGS------GPR--ITHATIGKVVD-MGIKDPNNMGAAMAPAAADTIEQHFKDTGRSPDDYDLIVTGD 230 (329)
T ss_dssp E--EEEEEEEESS--------SEE--EEEEE----B--SS---TT-HHHHHHHHHHHHHHHHHHHCT--GGG-SEEEESS
T ss_pred EEeceEEEEEecCCC------CcE--EEEEEEEEEEE-cCCCCcccchhhHhHHHHHHHHHHHHHhCCChhhcCeEEecc
Confidence 456888999986432 232 22211 1111 1223343333 3445678889999999999999999863
Q ss_pred CCCCCCcHHHHHHHHHHhhccc
Q 018323 248 TSTPLGDTVEATAIRTVFSDHA 269 (358)
Q Consensus 248 ~gt~~~d~~E~~a~~~~~~~~~ 269 (358)
.|. +-...+.+++.++.
T Consensus 231 Lg~-----vG~~il~~Ll~~~G 247 (329)
T PF07451_consen 231 LGK-----VGRKILRDLLKEKG 247 (329)
T ss_dssp -HH-----HHHHHHHHHHHHTT
T ss_pred hHH-----HHHHHHHHHHHHcC
Confidence 331 12345666665544
|
This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A. |
| >PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=97.86 E-value=2.8e-05 Score=63.91 Aligned_cols=90 Identities=20% Similarity=0.243 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
..-|++.|++..|++.++++++|. -+++||-++- +.- -..+.+|...||
T Consensus 53 ~vTmA~nAa~~ll~~~~id~~~Ig-----~l~vgTES~v----------------D~s----------Ks~~t~v~~ll~ 101 (174)
T PF01154_consen 53 IVTMAANAAKPLLDRYNIDPDDIG-----RLIVGTESGV----------------DKS----------KSISTYVHQLLG 101 (174)
T ss_dssp HHHHHHHHHHTTHHHHT-HHHHEE-----EEEEE-SS-S----------------BSS----------S-HHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcc-----EEEEeccccc----------------ccc----------ccHHHHHHHHhC
Confidence 346999999999999888765554 5778875421 111 135678899999
Q ss_pred CCCC----ceeccCCchhHHHHHHHHHHHHHcCCCC--EEEEeecCC
Q 018323 94 FQGP----NHAAVTACATGAHSIGDAARMIQFGDSD--VMVAGGTES 134 (358)
Q Consensus 94 l~gp----~~~v~~~cas~~~Al~~A~~~I~~G~~d--~vlv~g~e~ 134 (358)
+.+. .+.+-.+|-+|..||..|..+|+++..+ .+||++.|.
T Consensus 102 ~s~~~~~~~~e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDi 148 (174)
T PF01154_consen 102 LSGNPDCRGVEMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDI 148 (174)
T ss_dssp TTT-SSSEEEEEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEE
T ss_pred cCCCCceeeeehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEeccc
Confidence 9652 2456789999999999999999998765 899999987
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A .... |
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0012 Score=48.69 Aligned_cols=89 Identities=18% Similarity=0.164 Sum_probs=53.4
Q ss_pred HHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCC
Q 018323 230 LKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPL 309 (358)
Q Consensus 230 l~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp 309 (358)
|+++|++++|||++.+|-.+.+ -...+.+.++-.. ..... .-..+||+.+++-.+.+..++ +.+.+
T Consensus 1 L~~~g~~~~did~~i~hq~~~~-----~~~~~~~~lgi~~---~~~~~-~~~~~Gn~~sa~~~~~L~~~~---~~g~~-- 66 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQASKK-----ILDSIAKRLGIPP---ERFPD-NLAEYGNTGSASIPINLADAL---EEGRI-- 66 (90)
T ss_dssp HHHTT--GGGESEEEE-SSSHH-----HHHHHHHHHTS-G---GGBE--THHHH-B-GGGHHHHHHHHHH---HTTSS--
T ss_pred CccccCCHHHCCEEEeCCCCHH-----HHHHHHHHcCCcH---HHHHH-HHhccCcchhhhHHHHHHHHH---HcCCC--
Confidence 6899999999999999954422 1223444444321 11112 226789999888777765544 33332
Q ss_pred CCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 310 TLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
.+.+.+++-++|.|.+.++++++
T Consensus 67 -----------------------~~Gd~vl~~~~G~G~~~~~~~~~ 89 (90)
T PF08541_consen 67 -----------------------KPGDRVLLVGFGAGFSWGAAVLR 89 (90)
T ss_dssp -----------------------CTTEEEEEEEEETTTEEEEEEEE
T ss_pred -----------------------CCCCEEEEEEEEhhheeEEEEEE
Confidence 33577888899999999998886
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.03 E-value=2.3 Score=39.39 Aligned_cols=113 Identities=15% Similarity=0.229 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|.+.++.+.++.-.++++.|- .+-||+.+-- +-. -.+=..+.+.|+
T Consensus 60 i~Sl~ltvvs~Lmery~i~~~~IG-----RLEVGTETii--DKS------------------------KSVKt~LMqLF~ 108 (462)
T KOG1393|consen 60 IISLSLTVVSRLMERYNIDPDSIG-----RLEVGTETII--DKS------------------------KSVKTVLMQLFE 108 (462)
T ss_pred hhhhhHHHHHHHHHHhCCChhhcc-----eEEecceecc--ccc------------------------hHHHHHHHHHhh
Confidence 456888999999999999887774 4667764310 000 011123444454
Q ss_pred CCC----CceeccCCchhHHHHHHHHHHHHHcCCCC--EEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcC
Q 018323 94 FQG----PNHAAVTACATGAHSIGDAARMIQFGDSD--VMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC 167 (358)
Q Consensus 94 l~g----p~~~v~~~cas~~~Al~~A~~~I~~G~~d--~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~ 167 (358)
=.| ......++|=+|..||..|.++|++-.-| .+||+..|... -+++.+||-+
T Consensus 109 ~sgNtdIEGiDttnACYGGtaALfnavnWiESssWDGr~aivV~gDIAv--------------------Y~~G~aRpTG- 167 (462)
T KOG1393|consen 109 ESGNTDIEGIDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGDIAV--------------------YAKGNARPTG- 167 (462)
T ss_pred hcCCCccccccccccccccHHHHHHHhhhhhhcccCCceeEEEEeeEEE--------------------ecCCCCCCCC-
Confidence 222 23446679999999999999999886544 66666666521 1456677754
Q ss_pred CCCceeeecceEEEEecc
Q 018323 168 GRDGFVIGEGSGVLVLEE 185 (358)
Q Consensus 168 ~~~g~~~geGaaa~vL~~ 185 (358)
|-||.|+++.+
T Consensus 168 -------GAgAVAmLIgP 178 (462)
T KOG1393|consen 168 -------GAGAVAMLIGP 178 (462)
T ss_pred -------CcceEEEEEcC
Confidence 57888999875
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=90.56 E-value=1.6 Score=41.60 Aligned_cols=98 Identities=18% Similarity=0.201 Sum_probs=56.7
Q ss_pred EEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHH-HHHHHHHHhhcccCCCCcce
Q 018323 198 AEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTV-EATAIRTVFSDHATSGSLAF 276 (358)
Q Consensus 198 a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~-E~~a~~~~~~~~~~~~~~~v 276 (358)
+.|.|++...-+.+... ....-..++++++|+++|++++|||.+.+..+........ -...+...++.. ..+.
T Consensus 11 vaIvG~g~t~~~~~~~~--~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~----~~~~ 84 (392)
T PRK06065 11 VAVIGAGLTLFRRRLLE--TPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI----RKPV 84 (392)
T ss_pred eEEEEecccCCcCCCCC--CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC----CCCe
Confidence 46788877654433211 1234557899999999999999999987742211111000 011121212211 1222
Q ss_pred ecccCCcCCcccchhHHHHHHHHHHHHhCC
Q 018323 277 SSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 306 (358)
Q Consensus 277 ~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 306 (358)
..+ +..+++|...+..+...++.|.
T Consensus 85 ~~V-----~~~gasG~~al~~A~~~I~sG~ 109 (392)
T PRK06065 85 SRV-----YVGGATGVMTAIAGWYHVASGL 109 (392)
T ss_pred EEE-----ecCchhHHHHHHHHHHHHhCCC
Confidence 211 3467889889999999999885
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=89.70 E-value=1.6 Score=41.52 Aligned_cols=98 Identities=16% Similarity=0.136 Sum_probs=58.1
Q ss_pred EEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCc-HHHHHHHHHHhhcccCCCCcce
Q 018323 198 AEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD-TVEATAIRTVFSDHATSGSLAF 276 (358)
Q Consensus 198 a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d-~~E~~a~~~~~~~~~~~~~~~v 276 (358)
+.|.|++...-+.+... ....-..++++++|+++||+++|||.+.+. +.++.++ ......+...++... ..+
T Consensus 3 v~IvG~g~t~~~~~~~~--~~~eLa~~A~~~AL~dAgi~~~dID~vi~g-~~~~~~~~~~~a~~v~~~lGl~~---~~~- 75 (385)
T PRK12578 3 VAVIGVGNSKFGRRDDV--SVQELAWESIKEALNDAGVSQTDIELVVVG-STAYRGIELYPAPIVAEYSGLTG---KVP- 75 (385)
T ss_pred eEEEeecccceeecCCC--CHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-ecccccccCChHHHHHHHhCCCC---CCe-
Confidence 35777776543332211 123445689999999999999999998764 3322111 112222333333221 111
Q ss_pred ecccCCcCCcccchhHHHHHHHHHHHHhCCC
Q 018323 277 SSTKGAIGHLLGAAGAVEAIFAVLAIHHGVA 307 (358)
Q Consensus 277 ~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~i 307 (358)
..+ +..+++|+..+..+...++.|..
T Consensus 76 ~~v-----~~~casg~~al~~A~~~I~sG~~ 101 (385)
T PRK12578 76 LRV-----EAMCATGLAASLTAYTAVASGLV 101 (385)
T ss_pred eEE-----eccCHHHHHHHHHHHHHHHCCCC
Confidence 111 45788999999999999998863
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=88.75 E-value=2.4 Score=40.19 Aligned_cols=94 Identities=16% Similarity=0.084 Sum_probs=57.0
Q ss_pred EEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCccee
Q 018323 198 AEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS 277 (358)
Q Consensus 198 a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~ 277 (358)
+.|.|++...-+.+.. .....-..+++++||+++||+++|||.+.+... ... .....+.+.++... .+.
T Consensus 10 vaIvG~g~t~~~~~~~--~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~-~~~---~~~~~la~~lGl~~----~~~- 78 (384)
T PRK06158 10 TAIVGAATAGLGEAPG--LSAMELLAQAAHRALADAGLTMADVDGLFTASP-DDA---LWGLSVAEYLGIRP----RFV- 78 (384)
T ss_pred EEEEEeeeccceeCCC--CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CCC---CcHHHHHHHcCCCC----eee-
Confidence 5688888765433211 112345678999999999999999999876422 111 11122333333221 121
Q ss_pred cccCCcCCcccchhHHHHHHHHHHHHhCC
Q 018323 278 STKGAIGHLLGAAGAVEAIFAVLAIHHGV 306 (358)
Q Consensus 278 ~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 306 (358)
..-+..++++...+..+...++.|.
T Consensus 79 ----~~~~~g~~s~~~al~~A~~~I~sG~ 103 (384)
T PRK06158 79 ----DGTMIGGSSFLAHLLPAALALEAGL 103 (384)
T ss_pred ----ccccCccHHHHHHHHHHHHHHHcCC
Confidence 1224567788888888999898875
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=88.56 E-value=2.2 Score=40.71 Aligned_cols=98 Identities=16% Similarity=0.135 Sum_probs=56.4
Q ss_pred EEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC-CCcHHHHHHHHHHhhcccCCCCcce
Q 018323 198 AEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTP-LGDTVEATAIRTVFSDHATSGSLAF 276 (358)
Q Consensus 198 a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~-~~d~~E~~a~~~~~~~~~~~~~~~v 276 (358)
+.|.|++.+.-+..... ....-..++++++|+++||+++|||.+.+ ++... .........+.+.++.. ..+
T Consensus 9 v~IvG~g~tp~~~~~~~--~~~~L~~ea~~~AL~dagl~~~dID~v~v-g~~~~~~~~~~~~~~~a~~lGl~----~~~- 80 (398)
T PRK06157 9 VAILGMGCTKFGERWDA--GAEDLMVEAFLEALADAGIEPKDIDAAWF-GTHYDEIGSGKSGTPLSRALRLP----NIP- 80 (398)
T ss_pred eEEEEeccccccccCCC--CHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EeccccccccchhHHHHHHcCCC----CCC-
Confidence 45667665443322111 12345678999999999999999998765 22111 00111112233333221 011
Q ss_pred ecccCCcCCcccchhHHHHHHHHHHHHhCCC
Q 018323 277 SSTKGAIGHLLGAAGAVEAIFAVLAIHHGVA 307 (358)
Q Consensus 277 ~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~i 307 (358)
...=+..++||+..+..++..++.|..
T Consensus 81 ----~~~v~~~c~sg~~ai~~A~~~I~sG~~ 107 (398)
T PRK06157 81 ----VTRVENFCATGSEAFRGAVYAVASGAY 107 (398)
T ss_pred ----EEEEecccHHHHHHHHHHHHHHHCCCC
Confidence 112256788999999999999998853
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=87.12 E-value=3.7 Score=39.19 Aligned_cols=96 Identities=18% Similarity=0.087 Sum_probs=57.0
Q ss_pred EEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC--CCcHHHHHHHHHHhhcccCCCCcc
Q 018323 198 AEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTP--LGDTVEATAIRTVFSDHATSGSLA 275 (358)
Q Consensus 198 a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~--~~d~~E~~a~~~~~~~~~~~~~~~ 275 (358)
+.|.|.+.+.-+.+. .....-..++++++|+++||+++|||.+... +..+ .........+...++.. .++
T Consensus 6 v~Ivg~~~t~~~r~~---~~~~~La~~A~~~Al~dAgl~~~dId~vi~~-~~~~~~~~~~~~a~~va~~lG~~----~~~ 77 (399)
T PRK06059 6 VYILGAGMHPWGKWG---RDFVEYGVVAARAALADAGLDWRDVQLVVGA-DTIRNGYPGFVAGATFAQALGWN----GAP 77 (399)
T ss_pred EEEEEecccccCCCC---CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCccCCccHHHHHHHHhCCC----CCc
Confidence 467777765433321 1123456788999999999999999998743 2111 11112222233333321 122
Q ss_pred eecccCCcCCcccchhHHHHHHHHHHHHhCC
Q 018323 276 FSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 306 (358)
Q Consensus 276 v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 306 (358)
.. .=+..+++|+..+..+...++.|.
T Consensus 78 ~~-----~v~~~Casg~~al~~A~~~I~sG~ 103 (399)
T PRK06059 78 VS-----SSYAACASGSQALQSARAQILAGL 103 (399)
T ss_pred ee-----cccchhHHHHHHHHHHHHHHHCCC
Confidence 22 224677888899999999998875
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.95 E-value=4.1 Score=39.29 Aligned_cols=101 Identities=15% Similarity=0.002 Sum_probs=57.0
Q ss_pred EEEEeeeeecCCCCCCCC--CCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcH-HHHHHHHHHhhcccCCCCc
Q 018323 198 AEVRGYGMSGDAHHITQP--HIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT-VEATAIRTVFSDHATSGSL 274 (358)
Q Consensus 198 a~i~g~~~~~~~~~~~~~--~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~-~E~~a~~~~~~~~~~~~~~ 274 (358)
+.|.|.+.+--+.+...+ .....-..++++++|+++|++++|||.+... +.++..+. .....+...++.. ...
T Consensus 5 v~Ivg~~rTp~g~~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g-~~~~~~~~~~~a~~v~~~lGl~---~~~ 80 (426)
T PRK08170 5 VYIVDGARTPFLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILG-CAMPSPDEANIARVVALRLGCG---EKV 80 (426)
T ss_pred EEEEecCCCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCCCcChHHHHHHHHhCcC---CCc
Confidence 456676655433322111 1123455788999999999999999987753 32232221 1112222223321 112
Q ss_pred ceecccCCcCCcccchhHHHHHHHHHHHHhCCC
Q 018323 275 AFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVA 307 (358)
Q Consensus 275 ~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~i 307 (358)
|...+ +..++||+..+..+...++.|..
T Consensus 81 p~~~v-----~~~CaSg~~al~~A~~~I~sG~~ 108 (426)
T PRK08170 81 PAWTV-----QRNCASGMQALDSAAANIALGRA 108 (426)
T ss_pred eeeec-----cchhhHHHHHHHHHHHHHHCCCC
Confidence 22222 23488999999999999988763
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.36 E-value=4.3 Score=38.56 Aligned_cols=94 Identities=16% Similarity=0.038 Sum_probs=57.5
Q ss_pred EEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCccee
Q 018323 198 AEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS 277 (358)
Q Consensus 198 a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~ 277 (358)
+.|.|++.+.-+.+.... ...-..+++++||+++||+++|||.+...+ ... .. ....+.+.++.. ..++.
T Consensus 7 vaIvG~g~t~~~~~~~~~--~~~L~~eA~~~Al~DAgl~~~dID~~~~~~-~~~-~~--~~~~~~~~lGl~----~~~~~ 76 (388)
T PRK08142 7 AYIVGAYEHPTRKAPDKS--VAQLHAEVAKGALADAGLSLADVDGYFCAG-DAP-GL--GPASMVDYLGLK----LRHVD 76 (388)
T ss_pred EEEEEEeeccceeCCCCC--HHHHHHHHHHHHHHHcCCCHHHCCEEEEcC-CCC-Cc--cHHHHHHhCCCC----Ceeec
Confidence 468888876544432211 235567899999999999999999876531 111 11 111233333321 11222
Q ss_pred cccCCcCCcccchhHHHHHHHHHHHHhCC
Q 018323 278 STKGAIGHLLGAAGAVEAIFAVLAIHHGV 306 (358)
Q Consensus 278 ~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 306 (358)
..+..+++|...+..+...++.|.
T Consensus 77 -----~v~~gg~s~~~a~~~A~~~I~sG~ 100 (388)
T PRK08142 77 -----STETGGSSYLAHVGHAAQAIAAGK 100 (388)
T ss_pred -----cccCCcHHHHHHHHHHHHHHHcCC
Confidence 234578888888999999999885
|
|
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=86.22 E-value=5.4 Score=38.04 Aligned_cols=79 Identities=19% Similarity=0.090 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC--cHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHH
Q 018323 220 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG--DTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 297 (358)
Q Consensus 220 ~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~--d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~ 297 (358)
.-..++++++|+++|++++|||.+.+. +.++.. +...........+.. ...|...+ +..++||+..+..
T Consensus 29 eL~~~A~~~AL~~agi~~~dID~vi~g-~~~~~~~~~~~~a~~~~~~~Gl~---~~~p~~~V-----~~aCaSg~~Al~~ 99 (394)
T PRK09051 29 DLGATVVREALARAGVDPDQVGHVVFG-HVIPTEPRDMYLSRVAAINAGVP---QETPAFNV-----NRLCGSGLQAIVS 99 (394)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEe-eeccccCCCccHHHHHHHHcCCC---CCCceEEe-----cccchHHHHHHHH
Confidence 455789999999999999999987753 322221 222222222222211 01222222 4677899999999
Q ss_pred HHHHHHhCCC
Q 018323 298 AVLAIHHGVA 307 (358)
Q Consensus 298 ~~~~l~~~~i 307 (358)
+...++.|..
T Consensus 100 A~~~I~sG~~ 109 (394)
T PRK09051 100 AAQAILLGDA 109 (394)
T ss_pred HHHHHHcCCC
Confidence 9999988763
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=85.69 E-value=5.9 Score=37.77 Aligned_cols=80 Identities=16% Similarity=0.106 Sum_probs=47.2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHH
Q 018323 219 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 298 (358)
Q Consensus 219 ~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~ 298 (358)
..-..++++++|+++||+++|||.+.+-..............+...++.. ..+|..++ +..++||+..+..+
T Consensus 26 ~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~---~~~p~~~v-----~~~caSg~~av~~A 97 (394)
T PLN02644 26 TELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLP---PSTICTTV-----NKVCASGMKAVMLA 97 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCC---CCCceEEE-----eccchHHHHHHHHH
Confidence 34567899999999999999999987521100010111111122222211 11232222 45789999999999
Q ss_pred HHHHHhCC
Q 018323 299 VLAIHHGV 306 (358)
Q Consensus 299 ~~~l~~~~ 306 (358)
..+++.|.
T Consensus 98 a~~I~sG~ 105 (394)
T PLN02644 98 AQSIQLGI 105 (394)
T ss_pred HHHHHcCC
Confidence 99998774
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=85.16 E-value=2.4 Score=40.94 Aligned_cols=98 Identities=13% Similarity=-0.015 Sum_probs=56.8
Q ss_pred EEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcH-HHH-HHHHHHhhcccCCCCcc
Q 018323 198 AEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT-VEA-TAIRTVFSDHATSGSLA 275 (358)
Q Consensus 198 a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~-~E~-~a~~~~~~~~~~~~~~~ 275 (358)
+.|.|++.+--+.+....+ ...-..++++++|+++||+++|||.+.+. ......+. ... ..+...++.. ..|
T Consensus 18 VaIvG~g~Tpfgr~~~~~~-~~eL~~eA~~~Al~dagl~~~dID~vv~~-~~~~~~~g~~~~~~~~~~~lGl~----~~~ 91 (430)
T PRK06365 18 VYMVAAGVTKFDKASPYMD-FRERVKKAFDYAMNDAGLTLADIDGSVAS-YFSDHFQRQLLAGIMVQDYLGLV----PKP 91 (430)
T ss_pred EEEEEeeecCccccCCCCC-HHHHHHHHHHHHHHHcCCCHHHcCEEEEe-cccccccccchhhHHHHHhcCCC----CCc
Confidence 5677877655443211111 13456788999999999999999997653 22111111 001 1111222211 112
Q ss_pred eecccCCcCCcccchhHHHHHHHHHHHHhCC
Q 018323 276 FSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 306 (358)
Q Consensus 276 v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 306 (358)
...-+..++||+..+..++..++.|.
T Consensus 92 -----~~~v~~~~aSg~~ai~~A~~~I~sG~ 117 (430)
T PRK06365 92 -----SKRIEGGGATGGLAFQAGYEEIASGR 117 (430)
T ss_pred -----eEEEeCCcHHHHHHHHHHHHHHHcCC
Confidence 12224578999999999999999885
|
|
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=84.26 E-value=6.2 Score=37.61 Aligned_cols=101 Identities=18% Similarity=0.055 Sum_probs=56.7
Q ss_pred EEEEeeeeecCCCCCC--CCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHH-HHHHHHHhhcccCCCCc
Q 018323 198 AEVRGYGMSGDAHHIT--QPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVE-ATAIRTVFSDHATSGSL 274 (358)
Q Consensus 198 a~i~g~~~~~~~~~~~--~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E-~~a~~~~~~~~~~~~~~ 274 (358)
++|.|.+.+--+.+.. .......-..++++++|+++|++++|||.+.+- +.++..+... ..-+...++.. ...
T Consensus 4 v~Ivg~~rTpfgk~~g~~~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g-~~~~~~~~~~~a~~va~~lGl~---~~~ 79 (393)
T PRK05656 4 VVIVAATRTAIGSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILG-QVLTAGAGQNPARQAAIKAGLP---HSV 79 (393)
T ss_pred EEEEEcccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-EecCCCCCCcHHHHHHHHcCCC---CCc
Confidence 4566766554433211 111123455789999999999999999987763 2222111111 11122222211 112
Q ss_pred ceecccCCcCCcccchhHHHHHHHHHHHHhCCC
Q 018323 275 AFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVA 307 (358)
Q Consensus 275 ~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~i 307 (358)
|...+ +..+++|+..+..+...++.|..
T Consensus 80 p~~~V-----~~~Casg~~ai~~A~~~I~sG~~ 107 (393)
T PRK05656 80 PAMTL-----NKVCGSGLKALHLAAQAIRCGDA 107 (393)
T ss_pred ceEEe-----cccchhHHHHHHHHHHHHHcCCC
Confidence 22222 46788999999999999988764
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=84.19 E-value=6.5 Score=37.37 Aligned_cols=93 Identities=23% Similarity=0.202 Sum_probs=55.8
Q ss_pred EEEEeeeeecCCCCCCCCCCC-hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcce
Q 018323 198 AEVRGYGMSGDAHHITQPHID-GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAF 276 (358)
Q Consensus 198 a~i~g~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v 276 (358)
+.|.|++.+.-+.+ +..+ ..-..+++++||++|||+++|||.+...... .. ....+.+.++.. ...++
T Consensus 6 v~IvG~g~t~~~r~---~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~--~~---~~~~l~~~lGl~---~~~~~ 74 (386)
T PRK07855 6 AAIVGIGATEFSKN---SGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTMD--TN---PEIAVARALGIG---ELKFF 74 (386)
T ss_pred EEEEEeeecccccC---CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCc--cc---cHHHHHHHCCCC---CCcce
Confidence 56888887543333 1222 3456789999999999999999988753211 11 112233333321 10111
Q ss_pred ecccCCcCCcccchhHHHHHHHHHHHHhCC
Q 018323 277 SSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 306 (358)
Q Consensus 277 ~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 306 (358)
.. -+..+++|...+..+...++.|.
T Consensus 75 ~~-----v~~gg~sg~~~~~~A~~~I~sG~ 99 (386)
T PRK07855 75 SR-----IHYGGGAACATVQQAAMAVATGV 99 (386)
T ss_pred ee-----ecCCcHHHHHHHHHHHHHHHCCC
Confidence 11 14567888888889999998874
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=84.17 E-value=6.4 Score=37.48 Aligned_cols=101 Identities=15% Similarity=0.026 Sum_probs=54.8
Q ss_pred EEEEeeeeecCCCCCC--CCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCc-HHHHHHHHHHhhcccCCCCc
Q 018323 198 AEVRGYGMSGDAHHIT--QPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD-TVEATAIRTVFSDHATSGSL 274 (358)
Q Consensus 198 a~i~g~~~~~~~~~~~--~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d-~~E~~a~~~~~~~~~~~~~~ 274 (358)
+.|.|.+.+--+.+.. .......-..++++++|+++||+++|||.+... +.++.++ ...........+.. ...
T Consensus 4 v~IvG~~~tp~~r~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g-~~~~~~~~~~~~~~~~~~~gl~---~~~ 79 (393)
T PRK05790 4 VVIVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMG-QVLQAGAGQNPARQAALKAGLP---VEV 79 (393)
T ss_pred eEEEeeecCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEE-EecCCCCCCcHHHHHHHHcCCC---CCC
Confidence 4567766554333211 011123445788999999999999999987642 2221111 11111111111111 011
Q ss_pred ceecccCCcCCcccchhHHHHHHHHHHHHhCCC
Q 018323 275 AFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVA 307 (358)
Q Consensus 275 ~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~i 307 (358)
+.. .=+..+++|+..+..+...++.|..
T Consensus 80 ~~~-----~v~~~Casg~~al~~A~~~I~sG~~ 107 (393)
T PRK05790 80 PAL-----TINKVCGSGLKAVALAAQAIRAGDA 107 (393)
T ss_pred cee-----eecccchHHHHHHHHHHHHHHcCCC
Confidence 111 1234788899999999999988753
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=83.95 E-value=5.6 Score=37.81 Aligned_cols=98 Identities=20% Similarity=0.205 Sum_probs=54.5
Q ss_pred EEEEeeeeecC-CCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcH-HHHHHHHHHhhcccCCCCcc
Q 018323 198 AEVRGYGMSGD-AHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT-VEATAIRTVFSDHATSGSLA 275 (358)
Q Consensus 198 a~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~-~E~~a~~~~~~~~~~~~~~~ 275 (358)
+.|.|++.... +.+... ....-..+++++||+++||+++|||.+....+.....+. .-...+...++.. ..+
T Consensus 5 v~IvG~g~t~~~~~~~~~--s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~----~~~ 78 (386)
T PRK08313 5 AAVLGTGQTKYVAKRQDV--SMAGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGAT----GKP 78 (386)
T ss_pred EEEEEeecCCcCccCCCC--CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCC----CCc
Confidence 46788876553 322111 123456789999999999999999988754211111000 0011222223321 111
Q ss_pred eecccCCcCCcccchhHHHHHHHHHHHHhCC
Q 018323 276 FSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 306 (358)
Q Consensus 276 v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 306 (358)
... =+..+++|...+..+...++.|.
T Consensus 79 ~~~-----v~~~casg~~al~~A~~~I~sG~ 104 (386)
T PRK08313 79 LIR-----VHTAGSVGGSTAVVAASLVQSGV 104 (386)
T ss_pred eEE-----EeccCHHHHHHHHHHHHHHHCCC
Confidence 111 13456778888888888888875
|
|
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=83.87 E-value=3 Score=40.61 Aligned_cols=76 Identities=13% Similarity=0.133 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHH
Q 018323 222 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLA 301 (358)
Q Consensus 222 ~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~ 301 (358)
...+++++|+++|++|+|||++... |.|+.--+.-..-+..-++.+. .+ ..-.++..++++|+..+-.+-..
T Consensus 152 a~~Aa~~aL~~agi~p~dId~lIv~-tst~~~~Pslaa~V~~~lGlr~---~i----~~fdL~gmGCSggl~aL~lA~~l 223 (478)
T PLN02932 152 IIGAVDNLFRNTGISPSDIGILVVN-SSTFNPTPSLSSILVNKFKLRD---NI----KSLNLGGMGCSAGVIAIDAAKSL 223 (478)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEE-ccCCCCCCcHHHHHHHHhCCCC---Cc----eEEEeccchhhhHHHHHHHHHHH
Confidence 3468899999999999999998764 4444333333333444444321 11 11244456777778887777777
Q ss_pred HHhC
Q 018323 302 IHHG 305 (358)
Q Consensus 302 l~~~ 305 (358)
++.+
T Consensus 224 l~~~ 227 (478)
T PLN02932 224 LQVH 227 (478)
T ss_pred HHcC
Confidence 7765
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=83.67 E-value=8.1 Score=36.95 Aligned_cols=79 Identities=13% Similarity=0.108 Sum_probs=47.5
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHH-HHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHH
Q 018323 219 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVE-ATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 297 (358)
Q Consensus 219 ~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E-~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~ 297 (358)
..-..++++++|+++||+++|||.+..- +.++...... ...+....+.. ..+|...+ +..++||+..+..
T Consensus 27 ~eLa~~A~~~AL~~agl~~~dID~vv~g-~~~~~~~~~~~a~~va~~~Gl~---~~~p~~~V-----~~~CaSg~~Al~~ 97 (404)
T PRK06205 27 EELAATVIRALVERTGIDPARIDDVIFG-QGYPNGEAPAIGRVAALDAGLP---VTVPGMQL-----DRRCGSGLQAVIT 97 (404)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCCCCChHHHHHHHHcCCC---CCCceeeh-----hhhhhHHHHHHHH
Confidence 3455789999999999999999988653 3222221111 11122222211 01222211 4578899999999
Q ss_pred HHHHHHhCC
Q 018323 298 AVLAIHHGV 306 (358)
Q Consensus 298 ~~~~l~~~~ 306 (358)
+...++.|.
T Consensus 98 A~~~I~sG~ 106 (404)
T PRK06205 98 AAMQVQTGA 106 (404)
T ss_pred HHHHHHcCC
Confidence 999998875
|
|
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=83.64 E-value=7.3 Score=37.19 Aligned_cols=102 Identities=17% Similarity=0.176 Sum_probs=56.4
Q ss_pred EEEEeeeeecCCCCC-CCCCC-ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcc
Q 018323 198 AEVRGYGMSGDAHHI-TQPHI-DGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLA 275 (358)
Q Consensus 198 a~i~g~~~~~~~~~~-~~~~~-~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~ 275 (358)
+.|.|.+.+--+.+. ...+. ...-..++++++|+++||+++|||.+.. |+..+.+.... .+....++.. ...+.|
T Consensus 9 V~Ivg~~rTpf~k~~g~~~~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~-G~~~~~~~~~~-~~~~~~l~ag-~~~~~p 85 (397)
T PRK06954 9 IVIASAARTPMAAFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVM-GCVLPAGQGQA-PARQAALGAG-LPLSVG 85 (397)
T ss_pred EEEEecccCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEE-EecCCCccchH-HHHHHHHcCC-CCCCcc
Confidence 456666654433211 11111 2345578999999999999999998765 23222222111 1111112211 001122
Q ss_pred eecccCCcCCcccchhHHHHHHHHHHHHhCCC
Q 018323 276 FSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVA 307 (358)
Q Consensus 276 v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~i 307 (358)
...+ +..++||+..+..+..+++.|..
T Consensus 86 ~~~V-----~~aCaSG~~Av~~A~~~I~sG~~ 112 (397)
T PRK06954 86 CTTV-----NKMCGSGMRAAMFAHDMLVAGSV 112 (397)
T ss_pred Eeec-----cccchHHHHHHHHHHHHHHCCCC
Confidence 2222 46788999999999999998863
|
|
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=83.63 E-value=3 Score=39.68 Aligned_cols=75 Identities=15% Similarity=0.040 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceeccc-CCcCCcccchhHHHHHHHHH
Q 018323 222 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTK-GAIGHLLGAAGAVEAIFAVL 300 (358)
Q Consensus 222 ~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k-~~~Gh~~~asG~~~l~~~~~ 300 (358)
..+++++||+++|++++|||++.+. |.|...-+.-..-+.+.++... +.+ ....+..+++++..|-.+..
T Consensus 105 a~~Aa~~AL~~ag~~~~dId~lI~~-T~Tg~~~Ps~a~~l~~~LGl~~--------~~~r~~d~~~gC~g~~~aL~~A~~ 175 (389)
T PLN03168 105 AAEAAQKAIKEWGGRKSDITHIVFA-TTSGVNMPGADHALAKLLGLKP--------TVKRVMMYQTGCFGGASVLRVAKD 175 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCccHHHHHHHHhCcCC--------cceeeeeeCCccHHHHHHHHHHHH
Confidence 3578899999999999999998754 4444322332233333344321 112 23445667777777777777
Q ss_pred HHHhC
Q 018323 301 AIHHG 305 (358)
Q Consensus 301 ~l~~~ 305 (358)
.++.+
T Consensus 176 ~i~~~ 180 (389)
T PLN03168 176 LAENN 180 (389)
T ss_pred HHHhC
Confidence 77764
|
|
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=83.37 E-value=7.6 Score=34.07 Aligned_cols=77 Identities=17% Similarity=0.098 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC-cHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHH
Q 018323 220 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG-DTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 298 (358)
Q Consensus 220 ~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~-d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~ 298 (358)
.-..++++++|+++|++++|||.+....+ ++.. ...-...+...++.. +.+.. .+ ...+++++..+..+
T Consensus 9 ~l~~~A~~~al~~ag~~~~~i~~li~~~~-~~~~~~~~~a~~i~~~lg~~----~~~~~----~i-~~~C~s~~~al~~A 78 (254)
T cd00327 9 ELGFEAAEQAIADAGLSKGPIVGVIVGTT-GGSGEFSGAAGQLAYHLGIS----GGPAY----SV-NQACATGLTALALA 78 (254)
T ss_pred HHHHHHHHHHHHHcCCCCCCceEEEEEEC-CCCccccHHHHHHHHHhCCC----CCCcc----ee-ccHhHHHHHHHHHH
Confidence 34567899999999999999999887633 3322 122223344444431 01111 12 25667888888888
Q ss_pred HHHHHhCC
Q 018323 299 VLAIHHGV 306 (358)
Q Consensus 299 ~~~l~~~~ 306 (358)
...++.+.
T Consensus 79 ~~~i~~g~ 86 (254)
T cd00327 79 VQQVQNGK 86 (254)
T ss_pred HHHHHCCC
Confidence 88888765
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=83.30 E-value=5.2 Score=38.10 Aligned_cols=78 Identities=15% Similarity=0.086 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHH-HHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHH
Q 018323 220 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTV-EATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 298 (358)
Q Consensus 220 ~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~-E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~ 298 (358)
.-..++++++|+++|++++|||.+..- +.++.+|.. -...+....+.. ...|...+ +..++||+..+..+
T Consensus 28 eLa~~A~~~aL~~agl~~~dID~vi~g-~~~~~~~~~~~~~~~~~~~Gl~---~~~p~~~V-----~~~CaSg~~Al~~A 98 (393)
T PRK08235 28 ELGGIAIKEALERANVSAEDVEEVIMG-TVLQGGQGQIPSRQAARAAGIP---WEVQTETV-----NKVCASGLRAVTLA 98 (393)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEE-ecccCCCCCCHHHHHHHHcCCC---CCcceeeh-----hhhhhHHHHHHHHH
Confidence 445788999999999999999988763 332222211 011111112211 01222222 45688999999999
Q ss_pred HHHHHhCC
Q 018323 299 VLAIHHGV 306 (358)
Q Consensus 299 ~~~l~~~~ 306 (358)
...++.|.
T Consensus 99 ~~~I~sG~ 106 (393)
T PRK08235 99 DQIIRAGD 106 (393)
T ss_pred HHHHHCCC
Confidence 99998875
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=83.00 E-value=5.2 Score=38.07 Aligned_cols=96 Identities=16% Similarity=0.026 Sum_probs=54.3
Q ss_pred EEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEec-CCCCCCCcHHHHHHHHHHhhcccCCCCcce
Q 018323 198 AEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAH-ATSTPLGDTVEATAIRTVFSDHATSGSLAF 276 (358)
Q Consensus 198 a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h-~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v 276 (358)
+.|.|.+.+.-+... .......-...+++++|+++|++++|||.+... ..+... ....+...++.. .++
T Consensus 3 v~IvG~~~t~~~~~~-~~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~----~~~~~~~~lGl~----~~~- 72 (391)
T PRK08256 3 VFVAGVGMTPFEKPG-ASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDST----SGQRALYEVGMT----GIP- 72 (391)
T ss_pred EEEEeccccccccCC-CCCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcc----hhHHHHHHcCCC----CCC-
Confidence 356666654333211 111123445678999999999999999976541 111111 111111122221 011
Q ss_pred ecccCCcCCcccchhHHHHHHHHHHHHhCCC
Q 018323 277 SSTKGAIGHLLGAAGAVEAIFAVLAIHHGVA 307 (358)
Q Consensus 277 ~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~i 307 (358)
...=+..++||+..+..+...++.|..
T Consensus 73 ----~~~v~~~caSg~~ai~~A~~~I~sG~~ 99 (391)
T PRK08256 73 ----IVNVNNNCSTGSTALFLARQAVRSGAA 99 (391)
T ss_pred ----CcccccccHHHHHHHHHHHHHHHCCCC
Confidence 122356788999999999999999874
|
|
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=82.35 E-value=6.2 Score=35.62 Aligned_cols=74 Identities=12% Similarity=0.110 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHH
Q 018323 222 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLA 301 (358)
Q Consensus 222 ~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~ 301 (358)
...+++++|+++|++|+|||++..+= ++-.--+.=..-+..-|+.+. ++... +++-.++++|+..+-.+-..
T Consensus 87 ~f~av~~LL~ktgv~p~dIdiLVvnc-s~f~ptPSLsamIvnr~~mr~---di~~~----nLsGMGCsAgliai~lA~~l 158 (290)
T PF08392_consen 87 IFGAVDDLLAKTGVKPSDIDILVVNC-SLFNPTPSLSAMIVNRYGMRS---DIKSY----NLSGMGCSAGLIAIDLAKDL 158 (290)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEC-cCCCcCCcHHHHHHHHhCCCc---Ceeee----cccCCcchhhHHHHHHHHHH
Confidence 44678999999999999999987662 222212222222333344432 22222 34444677777765555444
Q ss_pred HH
Q 018323 302 IH 303 (358)
Q Consensus 302 l~ 303 (358)
|+
T Consensus 159 L~ 160 (290)
T PF08392_consen 159 LQ 160 (290)
T ss_pred HH
Confidence 44
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=82.12 E-value=8.7 Score=36.01 Aligned_cols=46 Identities=7% Similarity=0.163 Sum_probs=32.3
Q ss_pred EEEEeeeeecCCCCCCCCCCC-hHHHHHHHHHHHHHcCCCCCCccEEE
Q 018323 198 AEVRGYGMSGDAHHITQPHID-GKGAILAMTRALKQSGLQSHQVDYVN 244 (358)
Q Consensus 198 a~i~g~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~agl~~~did~i~ 244 (358)
+.|.|++.+.-+.+... ... ..-..+++++||+++||+++|||.+.
T Consensus 4 vaIvG~g~t~~~~~~~~-~~~~~el~~eA~~~Al~DAgl~~~dID~~~ 50 (352)
T PRK07937 4 VAVVGFAQAPHVRRTDG-TTNGVEMLMPCFAELYAELGITKSDIGFWC 50 (352)
T ss_pred EEEEEeeccccccCCCC-CCcHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 45788877654332211 112 35667899999999999999999884
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=81.23 E-value=4.3 Score=39.85 Aligned_cols=75 Identities=9% Similarity=0.083 Sum_probs=45.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHH
Q 018323 223 ILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAI 302 (358)
Q Consensus 223 ~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l 302 (358)
..+++++|+++|++|+|||++... +.+-.--+.-..-+...++.+. .+. .-.++...+++|+..+-.|-..|
T Consensus 181 ~~Aa~~aL~kaGi~p~DIDiLIv~-~S~~~~~PSlaa~I~n~lGlr~---~i~----afdLsgmGCSggl~aLdlA~~lL 252 (511)
T PLN02192 181 FGAIDQLLAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRG---NIL----SYNLGGMGCSAGLISIDLAKHLL 252 (511)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCchHHHHHHHHhCCCC---Cce----EEEcccchhhhHHHHHHHHHHHH
Confidence 467899999999999999998876 3332222333333444444321 111 11344456677777777776666
Q ss_pred HhC
Q 018323 303 HHG 305 (358)
Q Consensus 303 ~~~ 305 (358)
+.+
T Consensus 253 ~a~ 255 (511)
T PLN02192 253 QVH 255 (511)
T ss_pred HcC
Confidence 654
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=81.13 E-value=4.5 Score=37.38 Aligned_cols=78 Identities=18% Similarity=0.104 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHH
Q 018323 220 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAV 299 (358)
Q Consensus 220 ~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~ 299 (358)
.-..++++++|+++|++|+|||++... +.++..-......+...++.. ..+...+ ...+++|+..+..+.
T Consensus 53 ~la~~A~~~aL~~ag~~~~dId~vi~~-s~~~~~~~~~~~~v~~~Lg~~----~~~~~~v-----~~~Casg~~al~~A~ 122 (326)
T CHL00203 53 KLAAEAANKALDKAHMDPLEIDLIILA-TSTPDDLFGSASQLQAEIGAT----RAVAFDI-----TAACSGFILALVTAT 122 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEE-eCCCCCCCchHHHHHHHhCCC----CCceeee-----cccchhHHHHHHHHH
Confidence 455788999999999999999998864 333321111122233334322 1221111 134677788888888
Q ss_pred HHHHhCCC
Q 018323 300 LAIHHGVA 307 (358)
Q Consensus 300 ~~l~~~~i 307 (358)
..++.|..
T Consensus 123 ~~i~sg~~ 130 (326)
T CHL00203 123 QFIQNGSY 130 (326)
T ss_pred HHHHcCCC
Confidence 88877653
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=80.61 E-value=6 Score=36.28 Aligned_cols=78 Identities=14% Similarity=0.114 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHH
Q 018323 220 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAV 299 (358)
Q Consensus 220 ~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~ 299 (358)
.-..++++++|+++|++++|||.+....+......+.-...+...++.. ..+... + ...+++|+..+..+.
T Consensus 53 ~la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~----~~~~~~----v-~~~C~s~~~al~~A~ 123 (318)
T TIGR00747 53 TMGFEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIK----GIPAFD----L-SAACAGFIYALSVAK 123 (318)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCC----CCcEee----h-hhhhHHHHHHHHHHH
Confidence 4567899999999999999999887643322221222222344444432 112111 1 245677888888888
Q ss_pred HHHHhCC
Q 018323 300 LAIHHGV 306 (358)
Q Consensus 300 ~~l~~~~ 306 (358)
..++.|.
T Consensus 124 ~~i~~g~ 130 (318)
T TIGR00747 124 QYIESGK 130 (318)
T ss_pred HHHHcCC
Confidence 8887764
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=80.25 E-value=4.2 Score=35.10 Aligned_cols=33 Identities=21% Similarity=0.385 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEec---CCCCCCCc
Q 018323 222 AILAMTRALKQSGLQSHQVDYVNAH---ATSTPLGD 254 (358)
Q Consensus 222 ~~~~~~~al~~agl~~~did~i~~h---~~gt~~~d 254 (358)
....++++|++++++++|||+|... |.|.|+.-
T Consensus 53 il~Lv~~al~ea~v~~~diD~icyTKGPGmgaPL~~ 88 (336)
T KOG2708|consen 53 ILGLVKQALEEAGVTSDDIDCICYTKGPGMGAPLSV 88 (336)
T ss_pred HHHHHHHHHHHcCCChhhCCEEEEcCCCCCCCchhh
Confidence 3456889999999999999998743 44555533
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 358 | ||||
| 1w0i_A | 431 | Arabidopsis Thaliana Mitochondrial Kas Length = 431 | 1e-146 | ||
| 1j3n_A | 408 | Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protei | 9e-85 | ||
| 3kzu_A | 428 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 1e-80 | ||
| 2iwy_A | 438 | Human Mitochondrial Beta-ketoacyl Acp Synthase Leng | 2e-78 | ||
| 2c9h_A | 444 | Structure Of Mitochondrial Beta-Ketoacyl Synthase L | 4e-77 | ||
| 4ddo_A | 451 | Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei | 2e-76 | ||
| 3e60_A | 424 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 5e-76 | ||
| 4f32_A | 451 | Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei | 4e-75 | ||
| 1e5m_A | 416 | Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kas | 5e-68 | ||
| 2gqd_A | 437 | The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii | 2e-67 | ||
| 2gfw_A | 427 | Structure Of Wild Type E. Coli Fabf (Kasii) Length | 5e-66 | ||
| 1b3n_A | 412 | Beta-Ketoacyl Carrier Protein Synthase As A Drug Ta | 5e-66 | ||
| 2gfy_A | 427 | Structure Of E. Coli Fabf(K335a) Mutant With Covale | 3e-65 | ||
| 3hnz_A | 427 | Structure Of E. Coli Fabf(C163a) In Complex With Pl | 7e-65 | ||
| 2gfv_A | 427 | Structure Of E. Coli Fabf (Kasii) C163q Mutant Leng | 1e-64 | ||
| 3o04_A | 413 | Crystal Structure Of The Beta-Keto-Acyl Carrier Pro | 1e-62 | ||
| 1ox0_A | 430 | The Crystal Structure Of Beta-Ketoacyl-[acyl Carrie | 2e-53 | ||
| 2rjt_A | 428 | Crystal Structure Analysis Of A Surface Entropy Red | 1e-52 | ||
| 2alm_A | 431 | Crystal Structure Analysis Of A Mutant Beta-Ketoacy | 2e-52 | ||
| 3lrf_A | 428 | Crystal Structure Of Beta-Ketoacyl Synthase From Br | 3e-49 | ||
| 3u0f_A | 411 | The Structure Of Beta-Ketoacyl Synthase From Brucel | 4e-49 | ||
| 1fj4_A | 406 | The Structure Of Beta-Ketoacyl-[acyl Carrier Protei | 1e-46 | ||
| 2wgd_A | 416 | Crystal Structure Of Kasa Of Mycobacterium Tubercul | 1e-46 | ||
| 1dd8_A | 406 | Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Pr | 1e-46 | ||
| 1h4f_A | 406 | E. Coli Beta-Ketoacyl [acyl Carrier Protein] Syntha | 3e-46 | ||
| 2byw_A | 418 | Structure Of Escherichia Coli Beta-Ketoacyl (Acyl C | 6e-46 | ||
| 2byz_A | 418 | Structure Of E. Coli Kas I H298q Mutant In Complex | 8e-46 | ||
| 2byy_A | 418 | E. Coli Kas I H298e Mutation Length = 418 | 8e-46 | ||
| 2wgf_A | 416 | Crystal Structure Of Mycobacterium Tuberculosis C17 | 3e-45 | ||
| 1ek4_A | 418 | Beta-Ketoacyl [acyl Carrier Protein] Synthase I In | 4e-43 | ||
| 2vb7_C | 406 | Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Ap | 4e-43 | ||
| 1f91_A | 406 | Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In | 5e-43 | ||
| 3oyt_A | 410 | 1.84 Angstrom Resolution Crystal Structure Of 3-Oxo | 2e-39 | ||
| 2gp6_A | 434 | X-Ray Crystal Structure Of Mycobacterium Tuberculos | 1e-38 | ||
| 1tqy_A | 424 | The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le | 1e-34 | ||
| 4ewg_A | 412 | Crystal Structure Of A Beta-Ketoacyl Synthase From | 5e-29 | ||
| 2qo3_A | 915 | Crystal Structure Of [ks3][at3] Didomain From Modul | 1e-16 | ||
| 2hg4_A | 917 | Structure Of The Ketosynthase-acyltransferase Didom | 5e-16 | ||
| 3hhd_A | 965 | Structure Of The Human Fatty Acid Synthase Ks-Mat D | 6e-09 | ||
| 2vz8_A | 2512 | Crystal Structure Of Mammalian Fatty Acid Synthase | 1e-08 | ||
| 1tqy_B | 415 | The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le | 5e-08 | ||
| 3zen_D | 3089 | Cryo-em Structure Of The Mycobacterial Fatty Acid S | 2e-06 |
| >pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas Length = 431 | Back alignment and structure |
|
| >pdb|1J3N|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protein) Synthase Ii From Thermus Thermophilus Hb8 Length = 408 | Back alignment and structure |
|
| >pdb|3KZU|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Brucella Melitensis Length = 428 | Back alignment and structure |
|
| >pdb|2IWY|A Chain A, Human Mitochondrial Beta-ketoacyl Acp Synthase Length = 438 | Back alignment and structure |
|
| >pdb|2C9H|A Chain A, Structure Of Mitochondrial Beta-Ketoacyl Synthase Length = 444 | Back alignment and structure |
|
| >pdb|4DDO|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis Length = 451 | Back alignment and structure |
|
| >pdb|3E60|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Bartonella Henselae Length = 424 | Back alignment and structure |
|
| >pdb|4F32|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis In Complex With Platencin Length = 451 | Back alignment and structure |
|
| >pdb|1E5M|A Chain A, Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kasii) From Synechocystis Sp Length = 416 | Back alignment and structure |
|
| >pdb|2GQD|A Chain A, The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii (Fabf) From Staphylococcus Aureus Length = 437 | Back alignment and structure |
|
| >pdb|2GFW|A Chain A, Structure Of Wild Type E. Coli Fabf (Kasii) Length = 427 | Back alignment and structure |
|
| >pdb|1B3N|A Chain A, Beta-Ketoacyl Carrier Protein Synthase As A Drug Target, Implications From The Crystal Structure Of A Complex With The Inhibitor Cerulenin. Length = 412 | Back alignment and structure |
|
| >pdb|2GFY|A Chain A, Structure Of E. Coli Fabf(K335a) Mutant With Covalently Linked Dodecanoic Acid Length = 427 | Back alignment and structure |
|
| >pdb|3HNZ|A Chain A, Structure Of E. Coli Fabf(C163a) In Complex With Platensimycin Length = 427 | Back alignment and structure |
|
| >pdb|2GFV|A Chain A, Structure Of E. Coli Fabf (Kasii) C163q Mutant Length = 427 | Back alignment and structure |
|
| >pdb|3O04|A Chain A, Crystal Structure Of The Beta-Keto-Acyl Carrier Protein Synthase Ii (Lmo2201) From Listeria Monocytogenes Length = 413 | Back alignment and structure |
|
| >pdb|1OX0|A Chain A, The Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 430 | Back alignment and structure |
|
| >pdb|2RJT|A Chain A, Crystal Structure Analysis Of A Surface Entropy Reduction Mutant Of S. Pneumoniae Fabf Length = 428 | Back alignment and structure |
|
| >pdb|2ALM|A Chain A, Crystal Structure Analysis Of A Mutant Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 431 | Back alignment and structure |
|
| >pdb|3LRF|A Chain A, Crystal Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Length = 428 | Back alignment and structure |
|
| >pdb|3U0F|A Chain A, The Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Bound To The Fragment 7-Hydroxycoumarin Length = 411 | Back alignment and structure |
|
| >pdb|1FJ4|A Chain A, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I In Complex With Thiolactomycin, Implications For Drug Design Length = 406 | Back alignment and structure |
|
| >pdb|2WGD|A Chain A, Crystal Structure Of Kasa Of Mycobacterium Tuberculosis Length = 416 | Back alignment and structure |
|
| >pdb|1DD8|A Chain A, Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I From Escherichia Coli Length = 406 | Back alignment and structure |
|
| >pdb|1H4F|A Chain A, E. Coli Beta-Ketoacyl [acyl Carrier Protein] Synthase I K328r Length = 406 | Back alignment and structure |
|
| >pdb|2BYW|A Chain A, Structure Of Escherichia Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I Lys328ala Mutant Length = 418 | Back alignment and structure |
|
| >pdb|2BYZ|A Chain A, Structure Of E. Coli Kas I H298q Mutant In Complex With C12 Fatty Acid Length = 418 | Back alignment and structure |
|
| >pdb|2BYY|A Chain A, E. Coli Kas I H298e Mutation Length = 418 | Back alignment and structure |
|
| >pdb|2WGF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa Variant Length = 416 | Back alignment and structure |
|
| >pdb|1EK4|A Chain A, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In Complex With Dodecanoic Acid To 1.85 Resolution Length = 418 | Back alignment and structure |
|
| >pdb|2VB7|C Chain C, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure After Soak In Peg Solution Length = 406 | Back alignment and structure |
|
| >pdb|1F91|A Chain A, Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In Complex With C10 Fatty Acid Substrate Length = 406 | Back alignment and structure |
|
| >pdb|3OYT|A Chain A, 1.84 Angstrom Resolution Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase I (Fabb) From Yersinia Pestis Co92 Length = 410 | Back alignment and structure |
|
| >pdb|2GP6|A Chain A, X-Ray Crystal Structure Of Mycobacterium Tuberculosis Beta- Ketoacyl Acyl Carrier Protein Synthase Ii (Mtkasb) Length = 434 | Back alignment and structure |
|
| >pdb|1TQY|A Chain A, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 424 | Back alignment and structure |
|
| >pdb|4EWG|A Chain A, Crystal Structure Of A Beta-Ketoacyl Synthase From Burkholderia Phymatum Stm815 Length = 412 | Back alignment and structure |
|
| >pdb|2QO3|A Chain A, Crystal Structure Of [ks3][at3] Didomain From Module 3 Of 6- Deoxyerthronolide B Synthase Length = 915 | Back alignment and structure |
|
| >pdb|2HG4|A Chain A, Structure Of The Ketosynthase-acyltransferase Didomain Of Module 5 From Debs. Length = 917 | Back alignment and structure |
|
| >pdb|3HHD|A Chain A, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain As A Framework For Inhibitor Design. Length = 965 | Back alignment and structure |
|
| >pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512 | Back alignment and structure |
|
| >pdb|1TQY|B Chain B, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 415 | Back alignment and structure |
|
| >pdb|3ZEN|D Chain D, Cryo-em Structure Of The Mycobacterial Fatty Acid Synthase Length = 3089 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Length = 431 | Back alignment and structure |
|---|
Score = 580 bits (1498), Expect = 0.0
Identities = 282/348 (81%), Positives = 318/348 (91%)
Query: 9 KSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRL 68
K++A FI YA+CAADEAL DA+WLP+++ +KERTGVSIGGGIGSI D V+AAQ+ICEKRL
Sbjct: 83 KAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRL 142
Query: 69 RRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMV 128
RRLSPFFIP+IL+NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDA RMIQFGD+DVMV
Sbjct: 143 RRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMV 202
Query: 129 AGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEH 188
AGGTESSIDALS+AGF +SRAL+TK+N +PQEASRPFDC RDGFVIGEGSGV+VLEE EH
Sbjct: 203 AGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDGFVIGEGSGVIVLEEYEH 262
Query: 189 AKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 248
AK+RGAKIYAE+ GYGMSGDAHHITQP DGKGA+LAMTRAL+QSGL +Q+DYVNAHAT
Sbjct: 263 AKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHAT 322
Query: 249 STPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAP 308
STP+GD VEA AI+TVFS+HATSG+LAFSSTKGA GHLLGAAGAVEAIF++LAIHHGVAP
Sbjct: 323 STPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAP 382
Query: 309 LTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
+TLN+ PDPIF+ FMPLT SK M + A+SNSFGFGGTNASLLF
Sbjct: 383 MTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 430
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Length = 428 | Back alignment and structure |
|---|
Score = 558 bits (1441), Expect = 0.0
Identities = 194/348 (55%), Positives = 245/348 (70%), Gaps = 4/348 (1%)
Query: 9 KSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRL 68
+ + FI YA+ AAD+AL DA W P + + RTGV IG GIG I V+A + +K
Sbjct: 82 RKVDPFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGP 141
Query: 69 RRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMV 128
RR+SPFFIP LIN+ASGHVS+K+ +GPNH+ VTACATG H+IGDAAR+I FGD+DVMV
Sbjct: 142 RRISPFFIPGRLINLASGHVSIKHKLRGPNHSVVTACATGTHAIGDAARLIAFGDADVMV 201
Query: 129 AGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEH 188
AGGTES + +S+AGF +AL+T+ N P ASRP+D RDGFV+GEG+G++VLEELEH
Sbjct: 202 AGGTESPVSRISLAGFAACKALSTERNDDPTAASRPYDEDRDGFVMGEGAGIVVLEELEH 261
Query: 189 AKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 248
A RGAKIYAEV GYGMSGDA HIT P G+GA M ALK++G+ ++DY+NAH T
Sbjct: 262 ALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDEIDYINAHGT 321
Query: 249 STPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAP 308
ST DT+E A+ V + A ++ SSTK +IGHLLGAAGA EA+F+ LAI +AP
Sbjct: 322 STM-ADTIELGAVERVVGEAAA--KISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAP 378
Query: 309 LTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
TLNL P + +P ++ I ALSNSFGFGGTNASL+ +
Sbjct: 379 ATLNLDNPAAQTRIDLVPHKP-RERKIDVALSNSFGFGGTNASLVLRR 425
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Length = 451 | Back alignment and structure |
|---|
Score = 558 bits (1441), Expect = 0.0
Identities = 172/349 (49%), Positives = 233/349 (66%), Gaps = 5/349 (1%)
Query: 9 KSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRL 68
+ + RFI A+ AADEAL +A W P + Q+ERT + GIG +A ++ + +
Sbjct: 97 RKMDRFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGV 156
Query: 69 RRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMV 128
RRLSPF IP L N+A+G +S+K+ F+GP VTACA +IGDA RMI+ G++DV++
Sbjct: 157 RRLSPFTIPFFLSNLAAGQISIKHRFRGPLGCPVTACAASVQAIGDAMRMIRTGEADVVL 216
Query: 129 AGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEH 188
AGG E++ D +S+ GF +RAL+T ++ P ASRPFD RDGFV+GEG+ ++V+E L+H
Sbjct: 217 AGGAEAAFDKVSLGGFAAARALSTGFSEEPVRASRPFDRDRDGFVMGEGAAMVVVESLDH 276
Query: 189 AKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 248
A RGA+ AE+ GYG + DA+H+T DG GA+ AM AL+ + QVDYVNAHAT
Sbjct: 277 ALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYVNAHAT 336
Query: 249 STPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAP 308
STP+GD E A++TVF A A SSTK A GHLLGAAGA+EA F++LA+ GV P
Sbjct: 337 STPVGDAGEIEALKTVFGVGA---GPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLP 393
Query: 309 LTLNLAKPDPIFND-NFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
TLNL PDP + + + A + +P+ ALSN FGFGG NAS+LF +
Sbjct: 394 GTLNLEHPDPAADGLDLIGPAA-RHVPVEIALSNGFGFGGVNASVLFRR 441
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Length = 438 | Back alignment and structure |
|---|
Score = 554 bits (1431), Expect = 0.0
Identities = 183/351 (52%), Positives = 240/351 (68%), Gaps = 8/351 (2%)
Query: 9 KSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRL 68
KS++ A+ AA+ A+ D+ W P + + TGV+IG G+ + + A K
Sbjct: 92 KSMSSPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGY 151
Query: 69 RRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMV 128
++SPFF+P+IL+NMA+G VS++Y +GPNHA TAC TGAH++GD+ R I GD+DVMV
Sbjct: 152 NKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMV 211
Query: 129 AGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEH 188
AGGT+S I LS+AGF ++RAL+T N P+ A RPF RDGFV+GEG+ VLVLEE EH
Sbjct: 212 AGGTDSCISPLSLAGFSRARALST--NSDPKLACRPFHPKRDGFVMGEGAAVLVLEEYEH 269
Query: 189 AKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 248
A +R A+IYAEV GYG+SGDA HIT P +G+GA+ M ALK +G+Q ++ Y+NAHAT
Sbjct: 270 AVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHAT 329
Query: 249 STPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAP 308
STPLGD E AI+ +F DHA +LA SSTKGA GHLLGAAGAVEA F LA ++ P
Sbjct: 330 STPLGDAAENKAIKHLFKDHAY--ALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLP 387
Query: 309 LTLNLAKPDPIFNDNFMPLTASKDMPISA---ALSNSFGFGGTNASLLFTK 356
TLNL +P F+ N++PL A ++ L+NSFGFGGTNA+L
Sbjct: 388 PTLNLDCSEPEFDLNYVPLKA-QEWKTEKRFIGLTNSFGFGGTNATLCIAG 437
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Length = 434 | Back alignment and structure |
|---|
Score = 531 bits (1370), Expect = 0.0
Identities = 121/349 (34%), Positives = 186/349 (53%), Gaps = 8/349 (2%)
Query: 8 LKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKR 67
L+ + + + +A D R VSIG G+GS + V + + +
Sbjct: 93 LRRMGYLQRMSTVLSRRLWENAGSPEVD---TNRLMVSIGTGLGSAEELVFSYDDMRARG 149
Query: 68 LRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVM 127
++ +SP + + + N A+ V ++ + V+ACA+GA +I A + I G++D
Sbjct: 150 MKAVSPLTVQKYMPNGAAAAVGLERHAKAGVMTPVSACASGAEAIARAWQQIVLGEADAA 209
Query: 128 VAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELE 187
+ GG E+ I+A+ +AGF + R + + N P A RPFD RDGFV GEG +L++E E
Sbjct: 210 ICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDRDRDGFVFGEGGALLLIETEE 269
Query: 188 HAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHA 247
HAK RGA I A + G ++ D H+ P +G+ A A+TRA++ +GL +D+VNAHA
Sbjct: 270 HAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDIDHVNAHA 329
Query: 248 TSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVA 307
T T +GD E AI + A + K A+GH +GA GAVE+I VLA+ V
Sbjct: 330 TGTQVGDLAEGRAINNALGGNR----PAVYAPKSALGHSVGAVGAVESILTVLALRDQVI 385
Query: 308 PLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
P TLNL DP + + + + A++NSFGFGG N ++ F +
Sbjct: 386 PPTLNLVNLDPEIDLDVVAGEP-RPGNYRYAINNSFGFGGHNVAIAFGR 433
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Length = 416 | Back alignment and structure |
|---|
Score = 528 bits (1362), Expect = 0.0
Identities = 129/344 (37%), Positives = 188/344 (54%), Gaps = 10/344 (2%)
Query: 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLS 72
+ A D +R V +G G+G V++ ++ R++S
Sbjct: 82 YVQRMGKLLGGQLWESAGSPEVD---PDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVS 138
Query: 73 PFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGT 132
P + I+ N A+ + ++ G + V+AC++G+ +I A R I GD+DV V GG
Sbjct: 139 PLAVQMIMPNGAAAVIGLQLGARAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGV 198
Query: 133 ESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKR 192
E I+AL +A F RA++T+ N P+ ASRPFD RDGFV GE ++++E EHAK R
Sbjct: 199 EGPIEALPIAAFSMMRAMSTR-NDEPERASRPFDKDRDGFVFGEAGALMLIETEEHAKAR 257
Query: 193 GAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 252
GAK A + G G++ DA H+ P DG A AMTR+L+ +GL +D+VNAH T+TP+
Sbjct: 258 GAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVNAHGTATPI 317
Query: 253 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLN 312
GD EA AIR D A A + K A+GH +GA GA+E++ VL + GV P TLN
Sbjct: 318 GDAAEANAIRVAGCDQA-----AVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLN 372
Query: 313 LAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
PDP + + + + A++NSFGFGG N +L F +
Sbjct: 373 YETPDPEIDLDVVAGEP-RYGDYRYAVNNSFGFGGHNVALAFGR 415
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Length = 427 | Back alignment and structure |
|---|
Score = 521 bits (1344), Expect = 0.0
Identities = 165/348 (47%), Positives = 234/348 (67%), Gaps = 4/348 (1%)
Query: 9 KSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRL 68
+ + FI Y + A +A+ D+ +++ R G +IG GIG + + +
Sbjct: 83 RKMDAFIQYGIVAGVQAMQDSGLEITEE-NATRIGAAIGSGIGGLGLIEENHTSLMNGGP 141
Query: 69 RRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMV 128
R++SPFF+P ++NM +GH+++ YG +GP+ + TA +G H+IG AAR+I +GD+DVMV
Sbjct: 142 RKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAATSGVHNIGHAARIIAYGDADVMV 201
Query: 129 AGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEH 188
AGG E + L + GF +RAL+T+ N PQ ASRP+D RDGFV+G+G+G+LVLEE EH
Sbjct: 202 AGGAEKASTPLGVGGFGAARALSTR-NDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEH 260
Query: 189 AKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 248
AKKRGAKIYAE+ G+GMS DA+H+T P +G GA LAM AL+ +G+++ Q+ YVNAH T
Sbjct: 261 AKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGT 320
Query: 249 STPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAP 308
STP GD EA A++T+F + A+ + SSTK GHLLGAAGAVE+I+++LA+ P
Sbjct: 321 STPAGDKAEAQAVKTIFGEAAS--RVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVP 378
Query: 309 LTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
T+NL PD + +F+P A + + L NSFGFGGTN SL+F K
Sbjct: 379 PTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 426
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 408 | Back alignment and structure |
|---|
Score = 518 bits (1336), Expect = 0.0
Identities = 188/348 (54%), Positives = 242/348 (69%), Gaps = 6/348 (1%)
Query: 9 KSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRL 68
+ + RF+ YAL AA AL DA P D ER G +G GIG + +++ E+
Sbjct: 66 RRLDRFVQYALIAAQLALEDAGLKPEDL-DPERVGTLVGTGIGGMETWEAQSRVFLERGP 124
Query: 69 RRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMV 128
R+SPFFIP ++ NMAS H++M+YGF GP+ VTACATGA ++G A RMIQ G++D+++
Sbjct: 125 NRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALGSALRMIQLGEADLVL 184
Query: 129 AGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEH 188
AGGTE++I +++ F RAL+T+ N P++ASRPF RDGFV+GEG+GVLVLE EH
Sbjct: 185 AGGTEAAITPMAIGAFAVMRALSTR-NEEPEKASRPFTLSRDGFVMGEGAGVLVLEAYEH 243
Query: 189 AKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 248
AKKRGA+IYAE+ G+G S DAHHIT+PH +GKGA LAM RALK +G+ QV Y+NAH T
Sbjct: 244 AKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGT 303
Query: 249 STPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAP 308
STP+GD E AI+ VF DHA L SSTK IGHLLGAAGAVEAI V A++HGV P
Sbjct: 304 STPVGDRAEVLAIKRVFGDHAK--RLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIP 361
Query: 309 LTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
T+NL PDP + +F+P ++ + ALSNSF FGG NA L F +
Sbjct: 362 PTINLEDPDPELDLDFVP--EPREAKVDYALSNSFAFGGHNAVLAFKR 407
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Length = 430 | Back alignment and structure |
|---|
Score = 518 bits (1337), Expect = 0.0
Identities = 154/344 (44%), Positives = 207/344 (60%), Gaps = 9/344 (2%)
Query: 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLS 72
+ YAL AA EA++ A ++R GV + GIG I + D + EK +R+
Sbjct: 92 NYSLYALYAAQEAVNHANLDVEAL-NRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVK 150
Query: 73 PFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGT 132
P +P+ L NMASG+V+M++G G + TAC++ +IGDA R I+FG DVM+ GGT
Sbjct: 151 PMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGT 210
Query: 133 ESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKR 192
E+SI ++AGF AL+T P AS PFD R+GFV+GEGSG+LVLE LEHA+KR
Sbjct: 211 EASITPFAIAGFQALTALST--TEDPTRASIPFDKDRNGFVMGEGSGMLVLESLEHAEKR 268
Query: 193 GAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 252
GA I AEV GYG + DA+H+T PH +G+GAI A+ AL+++ + QV YVNAH TSTP
Sbjct: 269 GATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPA 328
Query: 253 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLN 312
+ E+ AI V + SSTK GHLLGAAGAVEAI + A+ H P+T
Sbjct: 329 NEKGESGAIVAVLGKE-----VPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAG 383
Query: 313 LAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
++ N + + I A+SN+FGFGG NA L F +
Sbjct: 384 TSEVSDYIEANVVYGQG-LEKEIPYAISNTFGFGGHNAVLAFKR 426
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Length = 413 | Back alignment and structure |
|---|
Score = 517 bits (1335), Expect = 0.0
Identities = 161/348 (46%), Positives = 230/348 (66%), Gaps = 6/348 (1%)
Query: 9 KSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRL 68
+ + RF YA+ +A+ A+ D+ + D R GV IG GIG + ++ +
Sbjct: 69 RKMDRFTHYAIASAEMAVQDSGLVIDDS-NANRVGVWIGSGIGGMETFETQYEIFLNRGH 127
Query: 69 RRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMV 128
RR+SPFF+P ++ +M SG VS+++G +G N VTACAT +SIGDA ++I+ GD+D M+
Sbjct: 128 RRVSPFFVPMMIPDMGSGQVSIRFGAKGINSTTVTACATATNSIGDAFKVIERGDADAMI 187
Query: 129 AGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEH 188
GG E+ I +S+AGF ++AL+ N P+ A RPFD RDGF+IGEG+G+++LEE EH
Sbjct: 188 TGGAEAPITKMSLAGFTANKALSL--NPDPETACRPFDKDRDGFIIGEGAGIVILEEYEH 245
Query: 189 AKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 248
AK RGAKIYAE+ GYG +GDA+HIT P +G+GA AM A+ +GL +VDY+NAH T
Sbjct: 246 AKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKVDYINAHGT 305
Query: 249 STPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAP 308
STP D E AI+TVF +HA LA SSTK GH LGA+G +EAIFA+L I +
Sbjct: 306 STPYNDEYETQAIKTVFGEHAK--KLAISSTKSMTGHTLGASGGIEAIFALLTIRDNIIA 363
Query: 309 LTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
T++L D + + +++P A ++ ++ +SNSFGFGG NA+L+F +
Sbjct: 364 PTIHLKNQDEVCDLDYVPNEA-REANVNVVISNSFGFGGHNATLVFKR 410
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Length = 416 | Back alignment and structure |
|---|
Score = 517 bits (1335), Expect = 0.0
Identities = 166/348 (47%), Positives = 227/348 (65%), Gaps = 5/348 (1%)
Query: 9 KSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRL 68
K + RF +A+CA+ +A++DAK + ++ + GV IG GIG + D ++ +K
Sbjct: 72 KRMDRFCHFAVCASQQAINDAKLVINEL-NADEIGVLIGTGIGGLKVLEDQQTILLDKGP 130
Query: 69 RRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMV 128
R SPF IP ++ NMASG ++ G +GPN+ VTACA G+++IGDA R++Q G + M+
Sbjct: 131 SRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMI 190
Query: 129 AGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEH 188
GGTE++I LS AGF +RAL+ + N P ASRPFD RDGFV+GEGSG+L+LEELE
Sbjct: 191 CGGTEAAITPLSYAGFASARALSFR-NDDPLHASRPFDKDRDGFVMGEGSGILILEELES 249
Query: 189 AKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 248
A RGAKIY E+ GY M+ DA+HIT P DG+GA A+ ALK SGL+ V Y+NAH T
Sbjct: 250 ALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGT 309
Query: 249 STPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAP 308
STP D E AI+ +HA ++A SSTK GHLLG +G +EA+ V+AI P
Sbjct: 310 STPANDVTETRAIKQALGNHAY--NIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVP 367
Query: 309 LTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
T+NL PDP + +++P + + + + ALSNSFGFGG N +L F K
Sbjct: 368 PTINLENPDPECDLDYVPGQS-RALIVDVALSNSFGFGGHNVTLAFKK 414
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Length = 412 | Back alignment and structure |
|---|
Score = 515 bits (1328), Expect = 0.0
Identities = 119/352 (33%), Positives = 182/352 (51%), Gaps = 11/352 (3%)
Query: 8 LKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKR 67
+S+ R YA+ A++ AL DA + + R GV+ G GS+ M+
Sbjct: 71 TRSMGRVSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGS 130
Query: 68 LRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVM 127
+ ++ +++ + + +VS+ + +G +ACA+G+ +IG A I G +M
Sbjct: 131 MTDVTSNSYVQMMPHTTAVNVSLFWDLKGRIVPTSSACASGSQAIGYAYENIAMGKQTLM 190
Query: 128 VAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELE 187
+AGG E ++A F A +T+ N P RPFD RDG V+GEG+ LVLEE E
Sbjct: 191 LAGGAEELS-GPAVAVFDTLYATSTR-NDEPHLTPRPFDAKRDGLVVGEGAATLVLEEYE 248
Query: 188 HAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHA 247
HAK RGA I+AE+ G+G + D H+TQP AM AL+ + L ++ + YVNAH
Sbjct: 249 HAKARGATIHAEIVGFGCNSDGAHMTQP--TASTMARAMQLALEDAKLDANAIAYVNAHG 306
Query: 248 TSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVA 307
TST GD E+ A F + + SS K +GH LGA GA+EA + + +
Sbjct: 307 TSTDRGDVAESQATARTFGER-----MPISSLKSYVGHTLGACGALEAWWTIEMMKRNWY 361
Query: 308 PLTLNLAKPDPIFND-NFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358
TLNL + DP +++ A + + +SN+F FGG N SL+F + +
Sbjct: 362 APTLNLTEVDPACAPLDYIRGEA-RAIDAEYVMSNNFAFGGINTSLIFRRVR 412
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Length = 437 | Back alignment and structure |
|---|
Score = 516 bits (1331), Expect = 0.0
Identities = 165/348 (47%), Positives = 229/348 (65%), Gaps = 6/348 (1%)
Query: 9 KSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRL 68
+ + RF YA+ AA EA+ DA+ ++ +R GV IG GIG + A + + +K
Sbjct: 93 RRMDRFTQYAIVAAREAVKDAQLDINEN-TADRIGVWIGSGIGGMETFEIAHKQLMDKGP 151
Query: 69 RRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMV 128
RR+SPFF+P ++ +MA+G VS+ G +GPN A VTACATG +SIG+A +++Q GD+D M+
Sbjct: 152 RRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMI 211
Query: 129 AGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEH 188
GGTE+ I +++AGF SRAL+T N + A RPF GRDGFV+GEG+G+LV+E LE
Sbjct: 212 TGGTEAPITHMAIAGFSASRALST--NDDIETACRPFQEGRDGFVMGEGAGILVIESLES 269
Query: 189 AKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 248
A+ RGA IYAE+ GYG +GDA+HIT P +G+G AM A+ +G++ V Y+NAH T
Sbjct: 270 AQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGT 329
Query: 249 STPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAP 308
STP+GD E AI+ F + A L SSTK GHLLGA G +EAIF+ L+I
Sbjct: 330 STPVGDLNEVKAIKNTFGEAAK--HLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVA 387
Query: 309 LTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
T++ PDP + + +P A +D+ I+ A+SNS GFGG NA L+F K
Sbjct: 388 PTIHAVTPDPECDLDIVPNEA-QDLDITYAMSNSLGFGGHNAVLVFKK 434
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Length = 406 | Back alignment and structure |
|---|
Score = 509 bits (1313), Expect = 0.0
Identities = 132/345 (38%), Positives = 189/345 (54%), Gaps = 12/345 (3%)
Query: 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQ-MICEKRLRRL 71
YA + ++A+ DA P R G+ G G GS V A M + L+ +
Sbjct: 70 DASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAV 129
Query: 72 SPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGG 131
P+ + + + + S ++ + G N++ +ACAT AH IG+A IQ G D++ AGG
Sbjct: 130 GPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGG 189
Query: 132 TESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKK 191
E ++ F AL+TKYN TP++ASR +D RDGFVI G G++V+EELEHA
Sbjct: 190 GEELCWEMAC-EFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEHALA 248
Query: 192 RGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTP 251
RGA IYAE+ GYG + D + P G+GA+ M A+ +DY+N+H TSTP
Sbjct: 249 RGAHIYAEIVGYGATSDGADMVAP--SGEGAVRCMKMAMHGVDT---PIDYLNSHGTSTP 303
Query: 252 LGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTL 311
+GD E AIR VF D + A S+TK GH LGAAG EAI+++L + HG ++
Sbjct: 304 VGDVKELAAIREVFGDKS----PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSI 359
Query: 312 NLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
N+ + D + D ++ +SNSFGFGGTNA+L+ K
Sbjct: 360 NIEELDEQAAGLNIVTET-TDRELTTVMSNSFGFGGTNATLVMRK 403
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Length = 428 | Back alignment and structure |
|---|
Score = 503 bits (1297), Expect = e-179
Identities = 139/345 (40%), Positives = 197/345 (57%), Gaps = 11/345 (3%)
Query: 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLS 72
R A+ A D+A+ DA + ERTG+ +G G S VD+A + EK +R+
Sbjct: 91 RGTAWNHIAMDQAIADAGLTEEEV-SNERTGIIMGSGGPSTRTIVDSADITREKGPKRVG 149
Query: 73 PFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGT 132
PF +P+ + + AS ++ + +G N++ +ACAT H IG+A MIQ+G D M AGG
Sbjct: 150 PFAVPKAMSSTASATLATFFKIKGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGC 209
Query: 133 ESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKR 192
E LS+ F A+++KYN TP ASR +D RDGFVI G+GVLVLE+LE A R
Sbjct: 210 EDLDWTLSV-LFDAMGAMSSKYNDTPSTASRAYDKNRDGFVIAGGAGVLVLEDLETALAR 268
Query: 193 GAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 252
GAKIY E+ GYG + D + + P G+GAI M AL ++DY+N HATSTP
Sbjct: 269 GAKIYGEIVGYGATSDGYDMVAP--SGEGAIRCMKMALSTVT---SKIDYINPHATSTPA 323
Query: 253 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLN 312
GD E AIR +F ++TK GH LGA G EAI+++L + + + +
Sbjct: 324 GDAPEIEAIRQIFGAGDV--CPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAH 381
Query: 313 LAKPDPIFND-NFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
+ + DP F D + ++ ++ LSNSFGFGGTNA+L+F +
Sbjct: 382 IEELDPAFADMPIVRKRI-DNVQLNTVLSNSFGFGGTNATLVFQR 425
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 424 | Back alignment and structure |
|---|
Score = 498 bits (1285), Expect = e-177
Identities = 114/350 (32%), Positives = 178/350 (50%), Gaps = 11/350 (3%)
Query: 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEK------ 66
R +A+ A EA + L D R GVS+G + + + ++ +
Sbjct: 72 RASQFAVACAREAFAASG-LDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEV 130
Query: 67 RLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDV 126
LS ++ ++ V+ G +GP T C +G S+G+A R I+ G +DV
Sbjct: 131 DAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADV 190
Query: 127 MVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEEL 186
M AG ++ I + +A F RA T + N P+ ASRPFD RDGFV+ EG+ + VLE+
Sbjct: 191 MFAGAADTPITPIVVACFDAIRATTAR-NDDPEHASRPFDGTRDGFVLAEGAAMFVLEDY 249
Query: 187 EHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAH 246
+ A RGA+I+AE+ GY +A+H+T DG+ + AL +S + +DY+NAH
Sbjct: 250 DSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDYINAH 309
Query: 247 ATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 306
+ T D E A + +HA SS K +GH LGA G++E VLA+ HGV
Sbjct: 310 GSGTRQNDRHETAAYKRALGEHAR--RTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGV 367
Query: 307 APLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
P T NL DP + +++PL A ++ + + L+ GFGG ++++
Sbjct: 368 VPPTANLRTSDPECDLDYVPLEA-RERKLRSVLTVGSGFGGFQSAMVLRD 416
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 415 | Back alignment and structure |
|---|
Score = 485 bits (1250), Expect = e-172
Identities = 89/350 (25%), Positives = 143/350 (40%), Gaps = 13/350 (3%)
Query: 8 LKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKR 67
L AL AAD AL DAK P GV G T + + +
Sbjct: 73 LPQTDPSTRLALTAADWALQDAKADPESL-TDYDMGVVTANACGGFDFTHREFRKLWSEG 131
Query: 68 LRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVM 127
+ +S + + +G +S+++G +GP+ A V A G ++G A R I+ G + ++
Sbjct: 132 PKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDALGHARRTIRRG-TPLV 190
Query: 128 VAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELE 187
V+GG +S++D S ++T P A PFD G+V GEG +LVLE+
Sbjct: 191 VSGGVDSALDPWGWVSQIASGRIST--ATDPDRAYLPFDERAAGYVPGEGGAILVLEDSA 248
Query: 188 HAKKRGA-KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAH 246
A+ RG Y E+ G + D + G A+ AL +G VD V A
Sbjct: 249 AAEARGRHDAYGELAGCASTFDPAPGSGR---PAGLERAIRLALNDAGTGPEDVDVVFAD 305
Query: 247 ATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 306
P D EA AI VF + + K G L G ++ + A++++ GV
Sbjct: 306 GAGVPELDAAEARAIGRVFGREG----VPVTVPKTTTGRLYSGGGPLDVVTALMSLREGV 361
Query: 307 APLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
T + + + + + AL + G G N++ + +
Sbjct: 362 IAPTAGVTSVPREYGIDLVLGEP-RSTAPRTALVLARGRWGFNSAAVLRR 410
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 395 bits (1016), Expect = e-126
Identities = 63/386 (16%), Positives = 116/386 (30%), Gaps = 46/386 (11%)
Query: 7 ILKSIARFIAYALCAADEALHDAKWLPS----DQGQKERTGVSIGGGIGSISDTVDAAQM 62
I+ + + L + EA + G G G+G +S +
Sbjct: 1005 IISQVDPITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKD 1064
Query: 63 ICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFG 122
+ + + M++ + GP V ACAT S+ I G
Sbjct: 1065 RFKDE-PVQNDILQESFINTMSAWVNMLLISSSGPIKTPVGACATSVESVDIGVETILSG 1123
Query: 123 DSDVMVAGGTESSIDALSMAGFCKSRALTT-----KYNGTPQEASRPFDCGRDGFVIGEG 177
+ + + GG + + F +A + ++ TP E SRP R+GF+ +G
Sbjct: 1124 KARICIVGGYDDFQE-EGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQG 1182
Query: 178 SGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQS 237
+G+ ++ + + A K G IY V + D + P GKG + S
Sbjct: 1183 AGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPA-PGKGILTTAREHHSSVKYAS 1241
Query: 238 ------------------------HQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGS 273
++++ + A P D E RT +
Sbjct: 1242 PNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQ 1301
Query: 274 LAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDM 333
+ + G+ A +G+ D T + D
Sbjct: 1302 --LRAAQQQWGNDFYKRDPRIAPLRGALATYGLTI-------DDLGVASFHGTSTKANDK 1352
Query: 334 PISAALSNSFG-FGGTNASLLFTKCQ 358
SA ++ G + + + Q
Sbjct: 1353 NESATINEMMKHLGRSEGNPVIGVFQ 1378
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 208 bits (531), Expect = 3e-60
Identities = 49/262 (18%), Positives = 75/262 (28%), Gaps = 11/262 (4%)
Query: 100 AAVTACATGAHSIGDAARMIQ--FGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGT 157
+ A + D G + A SS+ S K R
Sbjct: 1199 VPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREA 1258
Query: 158 PQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHI 217
+ + + E + ++ E +R +I+ E +
Sbjct: 1259 QIKDWVENELE---ALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAA-QQQWGNDFY 1314
Query: 218 DGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS--GSLA 275
I + AL GL + + H TST D E+ I + S +
Sbjct: 1315 KRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVI 1374
Query: 276 FSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDP---IFNDNFMPLTASKD 332
K GH GAAGA A+ ++ G+ P N D F P K
Sbjct: 1375 GVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKT 1434
Query: 333 MPISAALSNSFGFGGTNASLLF 354
+ A SFGFG +
Sbjct: 1435 DGVRAVSITSFGFGQKGGQAIV 1456
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878 | Back alignment and structure |
|---|
Score = 321 bits (825), Expect = 1e-99
Identities = 63/309 (20%), Positives = 101/309 (32%), Gaps = 24/309 (7%)
Query: 7 ILKSIARFIAYALCAADEALHDAKWLPSDQGQK----ERTGVSIGGGIGSISDTVDAAQM 62
I++ + Y L + EAL + + K G IG G+G S +
Sbjct: 1179 IIQQVDPVTLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKD 1238
Query: 63 ICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFG 122
+ + MA+ + GP V ACAT S+ I G
Sbjct: 1239 RYLDK-PVQKDILQESFVNTMAAWVNMLLLSSTGPIKTPVGACATAVESLDVGYDTIMQG 1297
Query: 123 DSDVMVAGG-----TESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEG 177
+ V + GG E S + +M ++ + P E SRP R+GF+ +G
Sbjct: 1298 KARVCLVGGFDDFQEEGSYEFANMGATSNAKEEFAR-GREPGEMSRPTSTTRNGFMESQG 1356
Query: 178 SGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQS 237
GV V+ + A + G IY V + D + P G+G +
Sbjct: 1357 CGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPA-PGQGVLTTAREKSGNFPSPL 1415
Query: 238 HQVDY-----------VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHL 286
+ Y + S L E AI++ S+ + + H+
Sbjct: 1416 LDIKYRRRQLELRRQQIKQWKESEYLYLQEEVAAIKSQRSEEDGPFDET-AYLRERTEHI 1474
Query: 287 LGAAGAVEA 295
A EA
Sbjct: 1475 EREARRQEA 1483
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878 | Back alignment and structure |
|---|
Score = 160 bits (405), Expect = 2e-43
Identities = 40/182 (21%), Positives = 59/182 (32%), Gaps = 6/182 (3%)
Query: 177 GSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQ 236
+E + ++R I E R + I + AL GL
Sbjct: 1455 SEEDGPFDETAYLRERTEHIEREARRQEAEAQTSFGNEFWRRD-SRIAPLRGALATWGLT 1513
Query: 237 SHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSG--SLAFSSTKGAIGHLLGAAGAVE 294
+ + H TST D E+ I + ++ K GH GAAGA
Sbjct: 1514 IDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAWM 1573
Query: 295 AIFAVLAIHHGVAPLTLNLAKPDP---IFNDNFMPLTASKDMPISAALSNSFGFGGTNAS 351
+ ++ G+ P N D F+ P + K I A SFGFG A
Sbjct: 1574 LNGCLQVLNTGIVPGNRNADNVDKVMEQFDYIVYPSRSIKTDGIKAFSVTSFGFGQKGAQ 1633
Query: 352 LL 353
+
Sbjct: 1634 AI 1635
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887 | Back alignment and structure |
|---|
Score = 296 bits (760), Expect = 7e-91
Identities = 65/386 (16%), Positives = 119/386 (30%), Gaps = 46/386 (11%)
Query: 7 ILKSIARFIAYALCAADEALHDAKWLPS----DQGQKERTGVSIGGGIGSISDTVDAAQM 62
I+ + + L + EA + G G G+G +S +
Sbjct: 1204 IISQVDPITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKD 1263
Query: 63 ICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFG 122
+ + + M++ + GP V ACAT S+ I G
Sbjct: 1264 RFKDE-PVQNDILQESFINTMSAWVNMLLISSSGPIKTPVGACATSVESVDIGVETILSG 1322
Query: 123 DSDVMVAGGTESSIDALSMAGFCKSRALTT-----KYNGTPQEASRPFDCGRDGFVIGEG 177
+ + + GG + + F +A + ++ TP E SRP R+GF+ +G
Sbjct: 1323 KARICIVGGYDDFQE-EGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQG 1381
Query: 178 SGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQS 237
+G+ ++ + + A K G IY V + D + P GKG + S
Sbjct: 1382 AGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPA-PGKGILTTAREHHSSVKYAS 1440
Query: 238 ------------------------HQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGS 273
++++ + A P D E RT + + S
Sbjct: 1441 PNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNE-AES 1499
Query: 274 LAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDM 333
++ + + + LA T L D T + D
Sbjct: 1500 QLRAAQQQWGNDFYKRDPRIAPLRGALA--------TYGLTIDDLGVASFHGTSTKANDK 1551
Query: 334 PISAALSNSFG-FGGTNASLLFTKCQ 358
SA ++ G + + + Q
Sbjct: 1552 NESATINEMMKHLGRSEGNPVIGVFQ 1577
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887 | Back alignment and structure |
|---|
Score = 162 bits (411), Expect = 2e-44
Identities = 49/262 (18%), Positives = 75/262 (28%), Gaps = 11/262 (4%)
Query: 100 AAVTACATGAHSIGDAARMIQ--FGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGT 157
+ A + D G + A SS+ S K R
Sbjct: 1398 VPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREA 1457
Query: 158 PQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHI 217
+ + + E + ++ E +R +I+ E +
Sbjct: 1458 QIKDWVENELE---ALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRA-AQQQWGNDFY 1513
Query: 218 DGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS--GSLA 275
I + AL GL + + H TST D E+ I + S +
Sbjct: 1514 KRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVI 1573
Query: 276 FSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDP---IFNDNFMPLTASKD 332
K GH GAAGA A+ ++ G+ P N D F P K
Sbjct: 1574 GVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKT 1633
Query: 333 MPISAALSNSFGFGGTNASLLF 354
+ A SFGFG +
Sbjct: 1634 DGVRAVSITSFGFGQKGGQAIV 1655
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 1e-39
Identities = 66/276 (23%), Positives = 109/276 (39%), Gaps = 22/276 (7%)
Query: 83 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA 142
M + +S + F+GP+ TAC++ ++ A + I+ G+ V GG + S
Sbjct: 139 MMANRLSFFFDFKGPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSL 198
Query: 143 GFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRG 202
F K L+ R FD G+ E ++L + A++ +YA +
Sbjct: 199 QFMKLGMLS------QDGTCRSFDAEGTGYCRAEAVVAVLLTKKSLARR----VYATILN 248
Query: 203 YGMSGDAHH---ITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEAT 259
G + D +T P G + +G ++Y+ AH T T +GD E
Sbjct: 249 AGTNTDGSKEQGVTFP--SGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGTKVGDPQELN 306
Query: 260 AIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDP- 318
I L STK +GH A+G I +L++ HGV L+ P+P
Sbjct: 307 GIVNALCATRREP-LLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPE 365
Query: 319 --IFNDNFMPL--TASKDMPISAALSNSFGFGGTNA 350
D + + + ++ SFGFGG+N
Sbjct: 366 IPALQDGRLQVVDRPLPIRGGNVGIN-SFGFGGSNV 400
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Length = 917 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 1e-36
Identities = 86/279 (30%), Positives = 131/279 (46%), Gaps = 20/279 (7%)
Query: 83 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA 142
+ASG V+ G +GP TAC++G ++ A ++ + + +AGG +
Sbjct: 177 VASGRVAYCLGLEGPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFT 236
Query: 143 GFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRG 202
F L +PF DGF + EG+GVLVL+ L A++ G + A +RG
Sbjct: 237 EFRSQGGLA------ADGRCKPFSKAADGFGLAEGAGVLVLQRLSAARREGRPVLAVLRG 290
Query: 203 YGMSGDAHH--ITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATA 260
++ D +T P G + RAL+ +G+++ VDYV AH T T LGD +E A
Sbjct: 291 SAVNQDGASNGLTAPS--GPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLGDPIEVHA 348
Query: 261 IRTVF-SDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 319
+ + + ++ L S K IGH AAG + AVLA+ HG P TL+ +P P
Sbjct: 349 LLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQ 408
Query: 320 FN---DNFMPLTASKDMPIS-----AALSNSFGFGGTNA 350
++ ++ P A +S SFG GTNA
Sbjct: 409 IEWDLGAVSVVSQARSWPAGERPRRAGVS-SFGISGTNA 446
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Length = 915 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 4e-36
Identities = 86/279 (30%), Positives = 132/279 (47%), Gaps = 20/279 (7%)
Query: 83 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA 142
+ASG +S G +GP+ + TAC++ ++ A ++ G+S + V GG
Sbjct: 155 VASGRISYTMGLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFV 214
Query: 143 GFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRG 202
F + RAL S+ F G DGF EG +++LE L A++ G ++ A VRG
Sbjct: 215 DFSRQRALA------ADGRSKAFGAGADGFGFSEGVTLVLLERLSEARRNGHEVLAVVRG 268
Query: 203 YGMSGD--AHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATA 260
++ D ++ ++ P G + +AL+ GL+ VD V AH T T LGD +EA A
Sbjct: 269 SALNQDGASNGLSAPS--GPAQRRVIRQALESCGLEPGDVDAVEAHGTGTALGDPIEANA 326
Query: 261 IRTVF-SDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 319
+ + D L S K IGH AAG + VLA+ +G P TL++ +P P
Sbjct: 327 LLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPH 386
Query: 320 FN---DNFMPLTASKDMPIS-----AALSNSFGFGGTNA 350
+ L ++ AA+S +FG GTNA
Sbjct: 387 VDWSSGGVALLAGNQPWRRGERTRRAAVS-AFGISGTNA 424
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 1e-28
Identities = 62/279 (22%), Positives = 113/279 (40%), Gaps = 28/279 (10%)
Query: 83 MASGHVSMKYGFQGPNHAAV---TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDAL 139
M + +S + F+GP ++ TAC++ ++ +A + I G + GG +
Sbjct: 141 MMANRLSFFFDFRGP---SIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPN 197
Query: 140 SMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAE 199
+ F + L+ P+ + FD +G+ EG ++L + A++ +YA
Sbjct: 198 TSVQFLRLGMLS------PEGTCKAFDTAGNGYCRSEGVVAVLLTKKSLARR----VYAT 247
Query: 200 VRGYGMSGDAHH---ITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTV 256
+ G + D +T P G + + +G+ +Y+ AH T T +GD
Sbjct: 248 ILNAGTNTDGFKEQGVTFPS--GDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGDPQ 305
Query: 257 EATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKP 316
E I L STK +GH A+G +L++ HG+ L+ P
Sbjct: 306 ELNGITRALCATRQEP-LLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSP 364
Query: 317 DP---IFNDNFMPL--TASKDMPISAALSNSFGFGGTNA 350
+P D + + + ++ SFGFGG+N
Sbjct: 365 NPEIPALLDGRLQVVDQPLPVRGGNVGIN-SFGFGGSNV 402
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 401 | Back alignment and structure |
|---|
Score = 46.7 bits (112), Expect = 6e-06
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 105 CATGAHSIGDAARMIQFGDSDVMVAGGTES 134
C +G ++ AAR I G+ V + G ES
Sbjct: 89 CGSGLEAVAQAARAIWAGEGKVYIGSGVES 118
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Length = 390 | Back alignment and structure |
|---|
Score = 45.9 bits (110), Expect = 1e-05
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 105 CATGAHSIGDAARMIQFGDSDVMVAGGTES 134
C + ++ AA+ I G+ DV V GG E
Sbjct: 94 CGSSMSALHTAAQAIMTGNGDVFVVGGVEH 123
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Length = 387 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 2e-05
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 105 CATGAHSIGDAARMIQFGDSDVMVAGGTES 134
C + ++ DAARMI GD+ V + GG E
Sbjct: 91 CGSSMQALHDAARMIMTGDAQVCLVGGVEH 120
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Length = 397 | Back alignment and structure |
|---|
Score = 44.0 bits (105), Expect = 5e-05
Identities = 35/126 (27%), Positives = 50/126 (39%), Gaps = 26/126 (20%)
Query: 174 IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQS 233
I +G+ +VL + A KRG A + + G P I G G I A+ +A+ ++
Sbjct: 254 INDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVE-----PSIMGIGPIPAIKQAVTKA 308
Query: 234 GLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTK-----GAI--GHL 286
G VD + EA A + A L + K GAI GH
Sbjct: 309 GWSLEDVDIFEIN----------EAFAAVSA----AIVKELGLNPEKVNIEGGAIALGHP 354
Query: 287 LGAAGA 292
LGA+G
Sbjct: 355 LGASGC 360
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Length = 397 | Back alignment and structure |
|---|
Score = 40.9 bits (97), Expect = 4e-04
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 105 CATGAHSIGDAARMIQFGDSDVMVAGGTES 134
C +G ++ A + I GDS ++VAGG E+
Sbjct: 92 CGSGLKAVCLAVQSIGIGDSSIVVAGGMEN 121
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Length = 395 | Back alignment and structure |
|---|
Score = 43.6 bits (104), Expect = 5e-05
Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 26/126 (20%)
Query: 174 IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQS 233
+ +G+ LVL + AK+ A + + + P + A + LK
Sbjct: 254 LNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVE-----PIDFPIAPVYAASMVLKDV 308
Query: 234 GLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTK-----GAI--GHL 286
GL+ + + EA ++ + A L K GA+ GH
Sbjct: 309 GLKKEDIAMWEVN----------EAFSLVVL----ANIKMLEIDPQKVNINGGAVSLGHP 354
Query: 287 LGAAGA 292
+G +GA
Sbjct: 355 IGMSGA 360
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Length = 393 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 7e-05
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 105 CATGAHSIGDAARMIQFGDSDVMVAGGTES 134
C++G ++ D A I+ G D+ +A G ES
Sbjct: 101 CSSGLTAVNDIANKIKVGQIDIGLALGVES 130
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Length = 394 | Back alignment and structure |
|---|
Score = 43.2 bits (103), Expect = 8e-05
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 105 CATGAHSIGDAARMIQFGDSDVMVAGGTES 134
C++G +I AA IQ G S+V+VAGG E+
Sbjct: 91 CSSGMQAIMSAAMQIQLGVSEVVVAGGVEA 120
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Length = 394 | Back alignment and structure |
|---|
Score = 41.3 bits (98), Expect = 3e-04
Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 26/123 (21%)
Query: 177 GSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQ 236
GS VLVL E AK++G + A + GY ++G P I G G A+ + L++
Sbjct: 254 GSAVLVLMSEEKAKEKGLQPLARIVGYSVAG-----VDPKIMGIGPAPAIRKGLEKVDWS 308
Query: 237 SHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTK-----GAI--GHLLGA 289
D + + EA A + + A L K + GH +G
Sbjct: 309 LEDADLLEIN----------EAFAAQYL----AVEKELDLDREKVNVNGSGVGLGHPIGC 354
Query: 290 AGA 292
GA
Sbjct: 355 TGA 357
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Length = 396 | Back alignment and structure |
|---|
Score = 43.2 bits (103), Expect = 9e-05
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 105 CATGAHSIGDAARMIQFGDSDVMVAGGTES 134
C +G S+ A+++I GD+D+M+ GG E+
Sbjct: 93 CGSGLRSVSMASQLIALGDADIMLVGGAEN 122
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Length = 396 | Back alignment and structure |
|---|
Score = 41.3 bits (98), Expect = 3e-04
Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 26/123 (21%)
Query: 177 GSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQ 236
G+ +LV+ E A++ G + A + YG +G P I G G + A +AL+ + +
Sbjct: 257 GAAMLVVMAKEKAEELGIEPLATIVSYGTAG-----VDPKIMGYGPVPATKKALEAANMT 311
Query: 237 SHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTK-----GAI--GHLLGA 289
+D V A+ EA A ++V A L K GAI GH +G
Sbjct: 312 IEDIDLVEAN----------EAFAAQSV----AVIRDLNIDMNKVNVNGGAIAIGHPIGC 357
Query: 290 AGA 292
+GA
Sbjct: 358 SGA 360
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Length = 395 | Back alignment and structure |
|---|
Score = 42.8 bits (102), Expect = 9e-05
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 105 CATGAHSIGDAARMIQFGDSDVMVAGGTES 134
C +G S+ AA+ I G++DV++AGGTE+
Sbjct: 91 CGSGLKSVQLAAQSITSGENDVVIAGGTEN 120
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Length = 395 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 2e-04
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 26/123 (21%)
Query: 177 GSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQ 236
G+ +L+L + A + G + A+++ Y +G +P + G G I A +ALK++GL
Sbjct: 256 GAAMLILMSQQKADELGIRPLAKIKSYASAG-----VEPEVMGTGPIPATRKALKKAGLS 310
Query: 237 SHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTK-----GAI--GHLLGA 289
+ +D + A+ EA A + + A L S+K GAI GH +GA
Sbjct: 311 INDIDLIEAN----------EAFAAQAL----AVKNELQIDSSKLNVNGGAIALGHPIGA 356
Query: 290 AGA 292
+GA
Sbjct: 357 SGA 359
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Length = 418 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 1e-04
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 105 CATGAHSIGDAARMIQFGDSDVMVAGGTES 134
C++G ++ A I+ G D+ +A G ES
Sbjct: 117 CSSGLQAVASIAGGIRNGSYDIGMACGVES 146
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Length = 442 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 1e-04
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 105 CATGAHSIGDAARMIQFGDSDVMVAGGTES 134
C++G ++ D A I+ G D+ + G ES
Sbjct: 118 CSSGLQAVADVAAAIKAGFYDIGIGAGLES 147
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Length = 392 | Back alignment and structure |
|---|
Score = 42.4 bits (101), Expect = 1e-04
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 26/126 (20%)
Query: 174 IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQS 233
+ +G+ +L A +RG + + + G P + G G I A +AL+++
Sbjct: 249 LNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVD-----PKVMGTGPIPASRKALERA 303
Query: 234 GLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTK-----GAI--GHL 286
G + +D V A+ EA A + A + L + + GAI GH
Sbjct: 304 GWKIGDLDLVEAN----------EAFAAQAC----AVNKDLGWDPSIVNVNGGAIAIGHP 349
Query: 287 LGAAGA 292
+GA+GA
Sbjct: 350 IGASGA 355
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Length = 392 | Back alignment and structure |
|---|
Score = 40.9 bits (97), Expect = 4e-04
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 105 CATGAHSIGDAARMIQFGDSDVMVAGGTES 134
C +G ++ + I GD+ ++VAGG ES
Sbjct: 89 CGSGLRAVALGMQQIATGDASIIVAGGMES 118
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 358 | |||
| 3o04_A | 413 | LMO2201 protein, beta-keto-acyl carrier protein sy | 100.0 | |
| 1e5m_A | 416 | KAS II, beta ketoacyl acyl carrier protein synthas | 100.0 | |
| 4ewg_A | 412 | Beta-ketoacyl synthase; ssgcid, structural genomic | 100.0 | |
| 2gqd_A | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli | 100.0 | |
| 3ho9_A | 427 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, | 100.0 | |
| 3kzu_A | 428 | 3-oxoacyl-(acyl-carrier-protein) synthase II; seat | 100.0 | |
| 2iwz_A | 438 | 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho | 100.0 | |
| 3mqd_A | 428 | Beta-ketoacyl synthase; ssgcid, ALS collaborative | 100.0 | |
| 4ddo_A | 451 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci | 100.0 | |
| 1tqy_A | 424 | Beta-ketoacyl synthase/acyl transferase; alpha-bet | 100.0 | |
| 1j3n_A | 408 | 3-oxoacyl-(acyl-carrier protein) synthase II; cond | 100.0 | |
| 1ox0_A | 430 | Beta ketoacyl-acyl carrier protein synthase; trans | 100.0 | |
| 1tqy_B | 415 | Actinorhodin polyketide putative beta-ketoacyl SY; | 100.0 | |
| 2ix4_A | 431 | 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke | 100.0 | |
| 2gp6_A | 434 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol | 100.0 | |
| 2wge_A | 416 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta | 100.0 | |
| 2vba_A | 406 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop | 100.0 | |
| 3hhd_A | 965 | Fatty acid synthase; transferase, multienzyme, meg | 100.0 | |
| 2hg4_A | 917 | DEBS, 6-deoxyerythronolide B synthase; ketosynthas | 100.0 | |
| 2qo3_A | 915 | Eryaii erythromycin polyketide synthase modules 3; | 100.0 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 100.0 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 100.0 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 100.0 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 100.0 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 100.0 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 100.0 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 100.0 | |
| 1wdk_C | 390 | 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame | 100.0 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 100.0 | |
| 2wu9_A | 442 | 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o | 100.0 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 100.0 | |
| 1afw_A | 393 | 3-ketoacetyl-COA thiolase; fatty acid metabolism; | 100.0 | |
| 2ib8_A | 395 | Acetyl-COA acetyltransferase; thiolase fold, potas | 100.0 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 100.0 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 100.0 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 100.0 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 99.97 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.97 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 99.97 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 99.96 | |
| 4egv_A | 520 | Acetyl-COA acetyltransferase; NEW SUB-family, thio | 99.96 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 99.95 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 99.94 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 99.94 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 99.94 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 99.92 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 99.92 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 99.9 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 99.9 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 99.89 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.86 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 99.86 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 99.86 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 99.84 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 99.83 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 99.83 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 99.82 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 99.81 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 99.81 | |
| 1xpm_A | 396 | 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s | 99.81 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 99.8 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.8 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 99.8 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 99.79 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 99.79 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 99.79 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 99.78 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 99.78 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 99.75 | |
| 2f82_A | 450 | HMG-COA synthase; HMGS1, transferase; 2.10A {Brass | 99.74 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 99.73 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 99.72 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 99.69 | |
| 3v4n_A | 388 | HMG-COA synthase; hydroxymethylglutaryl-COA syntha | 99.64 | |
| 3sqz_A | 425 | Putative hydroxymethylglutaryl-COA synthase; thiol | 99.63 | |
| 2p8u_A | 478 | Hydroxymethylglutaryl-COA synthase, cytoplasmic; h | 99.59 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.57 | |
| 2wya_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.29 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 87.08 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 86.4 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 83.68 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 83.48 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 82.88 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 82.71 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 82.54 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 82.38 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 81.56 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 81.12 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 80.56 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 80.2 |
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-69 Score=512.51 Aligned_cols=350 Identities=46% Similarity=0.799 Sum_probs=331.4
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 82 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (358)
+++++.++|||+++|+++|+++||+|||+++++++ +.++|||+|++.++....+..+..+...+...++|+.+++...+
T Consensus 63 i~~~~~~~~d~~~~l~l~Aa~~AL~dAGl~~~~id-~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 141 (413)
T 3o04_A 63 LEKKEARKMDRFTHYAIASAEMAVQDSGLVIDDSN-ANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPD 141 (413)
T ss_dssp SCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCTTT-GGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTT
T ss_pred cCHHHHhhCCHHHHHHHHHHHHHHHHcCCChhHcC-ccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhccccc
Confidence 57889999999999999999999999999998885 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCC
Q 018323 83 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 162 (358)
Q Consensus 83 ~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 162 (358)
+++++|++.||++||+++|+++|+|++.||..|+++|++|++|++||+|+|.++++.....+...+.++. ..+++..+
T Consensus 142 ~~a~~ia~~lgl~gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~~~~~~ls~--~~~p~~~~ 219 (413)
T 3o04_A 142 MGSGQVSIRFGAKGINSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSL--NPDPETAC 219 (413)
T ss_dssp HHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC--CCCTTTSC
T ss_pred HHHHHHHHHhCCCCcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHHHhcccccC--CCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999988888874 34467889
Q ss_pred CCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 018323 163 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDY 242 (358)
Q Consensus 163 ~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~ 242 (358)
+|||.+++|+++||||+++||++++.|+++|.+++++|+|++.++|+.+...|.+...++.++++++|+++|++|+||||
T Consensus 220 ~pfd~~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ 299 (413)
T 3o04_A 220 RPFDKDRDGFIIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKVDY 299 (413)
T ss_dssp CTTBTTCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCE
T ss_pred CCCcCCCCCceEeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCE
Confidence 99999999999999999999999999999999999999999999999998888888889999999999999999999999
Q ss_pred EEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 018323 243 VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFND 322 (358)
Q Consensus 243 i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~ 322 (358)
||+|||||+.+|.+|..++.++|+... .++++++.|+++||+++|||++++++++++|++++|||++|+++|+|.+++
T Consensus 300 ve~HgtgT~~~d~~e~~al~~~~~~~~--~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~ 377 (413)
T 3o04_A 300 INAHGTSTPYNDEYETQAIKTVFGEHA--KKLAISSTKSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCDL 377 (413)
T ss_dssp EECCCCCCHHHHHHHHHHHHHHHGGGT--TTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSBCSSCCS
T ss_pred EEEeCCcCcccCHHHHHHHHHHhcccC--CCCceecccccccccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCc
Confidence 999999999999999999999998754 468999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 323 NFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 323 ~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
++++ .+.+..+.+++++|+|||||+|+|+||++|+
T Consensus 378 ~~~~-~~~~~~~~~~~~~~sfgfgG~na~~vl~~~~ 412 (413)
T 3o04_A 378 DYVP-NEAREANVNVVISNSFGFGGHNATLVFKRIE 412 (413)
T ss_dssp CCCB-SSCEECCCCEEEEEEEETTTEEEEEEEECCC
T ss_pred ccCC-CcccCCCCCEEEEeCccCCceEEEEEEEeCC
Confidence 9988 5566678899999999999999999999985
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-69 Score=513.04 Aligned_cols=351 Identities=48% Similarity=0.779 Sum_probs=327.7
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 82 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (358)
+++++.++|||+++|+++++++||+|||+++++++ +++++||+|++.+++...++++..+..++...++|+.+++.+.+
T Consensus 66 ~~~~~~~~~d~~~~l~l~aa~~Al~dAg~~~~~i~-~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 144 (416)
T 1e5m_A 66 LDRKEAKRMDRFCHFAVCASQQAINDAKLVINELN-ADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIAN 144 (416)
T ss_dssp SCHHHHHTSCHHHHHHHHHHHHHHHHHTCCCCTTT-GGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTT
T ss_pred CCHHHHHhcCHHHHHHHHHHHHHHHHcCCChhhcC-ccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhH
Confidence 57789999999999999999999999999988884 88999999999999988888888888888899999999999999
Q ss_pred HHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCC
Q 018323 83 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 162 (358)
Q Consensus 83 ~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 162 (358)
.++.+|++.||++||+++|+++|+|++.||..|+++|++|++|++||+|+|.++++..+..|...+.++.. ..+|+..|
T Consensus 145 ~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~-~~~p~~~~ 223 (416)
T 1e5m_A 145 MASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFR-NDDPLHAS 223 (416)
T ss_dssp HHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-TTCGGGTC
T ss_pred HHHHHHHHHhCCCCceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcCCccCC-CCCCcccc
Confidence 99999999999999999999999999999999999999999999999999988888888888888877643 23467899
Q ss_pred CCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 018323 163 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDY 242 (358)
Q Consensus 163 ~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~ 242 (358)
+|||.+++|+++|||++++||++++.|+++|.+++++|+|++.++|+.+.+.|++.+.++.++++++|+++|++|+||||
T Consensus 224 rpfd~~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ 303 (416)
T 1e5m_A 224 RPFDKDRDGFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSY 303 (416)
T ss_dssp CTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCE
T ss_pred ccCccCCCCceeeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCCE
Confidence 99999999999999999999999999999999999999999999999998888888889999999999999999999999
Q ss_pred EEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 018323 243 VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFND 322 (358)
Q Consensus 243 i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~ 322 (358)
||+|+|||+.+|.+|..++.++|+... .++++++.|+++||+++|+|++++++++++|++++|||++|+++|+|.+++
T Consensus 304 ve~Hgtgt~~~D~~E~~al~~~~g~~~--~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~ 381 (416)
T 1e5m_A 304 INAHGTSTPANDVTETRAIKQALGNHA--YNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDL 381 (416)
T ss_dssp EECCCCSCHHHHHHHHHHHHHHHGGGG--GGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCS
T ss_pred EEEECCCCcCcCHHHHHHHHHHHcccC--CCCeeeCcchhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCc
Confidence 999999999999999999999997643 468999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 323 NFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 323 ~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
++++ .+.+.++.+++++|||||||+|+|+||++|+
T Consensus 382 ~~v~-~~~~~~~~~~a~~~sfGfGG~n~~~vl~~~~ 416 (416)
T 1e5m_A 382 DYVP-GQSRALIVDVALSNSFGFGGHNVTLAFKKYQ 416 (416)
T ss_dssp CCCB-SSCEECCCSEEEEEEEETTTEEEEEEEECCC
T ss_pred cccC-CccccCCCCEEEEccccCCCeeEEEEEEeCC
Confidence 9888 5566678899999999999999999999985
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-69 Score=511.44 Aligned_cols=345 Identities=34% Similarity=0.533 Sum_probs=324.5
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCC-CCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKW-LPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILI 81 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~-~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (358)
+++++.++|||+++|+++|+++||+|||+ ++++++ ..++||++|++.+++...++++..+.+.+...++|+.++..+.
T Consensus 66 i~~~~~~~~d~~~~l~l~aa~~Al~dAGl~~~~~i~-~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (412)
T 4ewg_A 66 WPRKKTRSMGRVSMYAVRASELALADAGFAGDESIS-DGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMP 144 (412)
T ss_dssp SCHHHHTTCCHHHHHHHHHHHHHHHHHTCTTCGGGG-TTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHST
T ss_pred CCHHHHhhCCHHHHHHHHHHHHHHHhcCCCCccccC-ccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcc
Confidence 57889999999999999999999999999 666664 8899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCC
Q 018323 82 NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 161 (358)
Q Consensus 82 ~~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 161 (358)
+.++++|++.||++||+++|+++|+|++.||..|+++|++|++|++||+|+|. +++.....|...+.++.. ..+|+..
T Consensus 145 ~~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~-~s~~~~~~~~~~~~l~~~-~~~p~~~ 222 (412)
T 4ewg_A 145 HTTAVNVSLFWDLKGRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEE-LSGPAVAVFDTLYATSTR-NDEPHLT 222 (412)
T ss_dssp THHHHHHHHHTTCCSCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHTTTCBCCC-TTCGGGC
T ss_pred cHHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccc-CCHHHHHHHHHhhccccC-CCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999 788888888888888754 4456789
Q ss_pred CCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcc
Q 018323 162 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVD 241 (358)
Q Consensus 162 ~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did 241 (358)
|+|||.+++|+++||||+++||++++.|+++|.++|++|+|++.++|+.+.+.| ...++.++++++|+++|++++|||
T Consensus 223 ~rpfd~~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p--~~~~~~~ai~~Al~~Agl~~~dId 300 (412)
T 4ewg_A 223 PRPFDAKRDGLVVGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQP--TASTMARAMQLALEDAKLDANAIA 300 (412)
T ss_dssp CCTTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSC--CHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred CCCCCCCCCCCceECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCC--CHHHHHHHHHHHHHHcCCCHHHCC
Confidence 999999999999999999999999999999999999999999999999988877 578899999999999999999999
Q ss_pred EEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCC-
Q 018323 242 YVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF- 320 (358)
Q Consensus 242 ~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~- 320 (358)
|||+|||||+.+|.+|..++.++|+.. +++++.|+++||+++|||++++++++++|++++|||++|+++|+|.+
T Consensus 301 ~ve~Hgtgt~~~D~~E~~al~~~~~~~-----~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~ 375 (412)
T 4ewg_A 301 YVNAHGTSTDRGDVAESQATARTFGER-----MPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACA 375 (412)
T ss_dssp EEECCCCCCHHHHHHHHHHHHHHHCTT-----CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTSC
T ss_pred EEEccCCCCccccHHHHHHHHHHcCCC-----CeeeCccccccccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCccc
Confidence 999999999999999999999999753 79999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 321 NDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
++++++ .+.+..+.+++++|||||||+|+|+||++|+
T Consensus 376 ~~~~v~-~~~~~~~~~~~~~~sfgfGG~na~~vl~~~~ 412 (412)
T 4ewg_A 376 PLDYIR-GEARAIDAEYVMSNNFAFGGINTSLIFRRVR 412 (412)
T ss_dssp CCEECC-SSCEECCCSEEEEEEEEGGGEEEEEEEECCC
T ss_pred cccccc-CcccCCCCCEEEEeeecCCcceEEEEEeeCC
Confidence 888887 5666778999999999999999999999985
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-68 Score=511.69 Aligned_cols=351 Identities=47% Similarity=0.782 Sum_probs=328.3
Q ss_pred CccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhh
Q 018323 2 RTRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILI 81 (358)
Q Consensus 2 ~~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (358)
.+++++.++|||+++|+++++++||+|||+++++++ +++++||+|++.+++...+..+..+..++...++|+.+++...
T Consensus 86 ~~~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~-~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 164 (437)
T 2gqd_A 86 HIDKKEARRMDRFTQYAIVAAREAVKDAQLDINENT-ADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIP 164 (437)
T ss_dssp TSCSTTTTTSCHHHHHHHHHHHHHHHHHTCCCCTTT-GGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHST
T ss_pred CCCHHHHHhcCHHHHHHHHHHHHHHHHcCCCccccC-CcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcch
Confidence 367889999999999999999999999999998884 8899999999999998888888888888889999999999999
Q ss_pred hHHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCC
Q 018323 82 NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 161 (358)
Q Consensus 82 ~~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 161 (358)
+.++++|++.||++||+++|+++|+|++.||..|+++|++|++|++||+|+|.++++..+..|...+.++. ...|+..
T Consensus 165 ~~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~--~~~p~~~ 242 (437)
T 2gqd_A 165 DMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST--NDDIETA 242 (437)
T ss_dssp THHHHHHHHHHTCCSSEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC--CCCTTTS
T ss_pred hHHHHHHHHHhCCCCceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCccC--CCCCccc
Confidence 99999999999999999999999999999999999999999999999999999888988888888888874 2346778
Q ss_pred CCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcc
Q 018323 162 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVD 241 (358)
Q Consensus 162 ~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did 241 (358)
|+|||.+++|+++|||++++||++++.|+++|.+++++|+|++.++|+.+.+.|++.+.++.++++++|+++|++|+|||
T Consensus 243 ~~pfd~~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~dId 322 (437)
T 2gqd_A 243 CRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQ 322 (437)
T ss_dssp SCTTCTTCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCC
T ss_pred cCCCCCCCCCceeeceEEEEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhhCC
Confidence 99999999999999999999999999999999999999999999999998888887888999999999999999999999
Q ss_pred EEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCC
Q 018323 242 YVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFN 321 (358)
Q Consensus 242 ~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~ 321 (358)
|||+|+|||+.+|.+|.+++.++|+... .++++++.|+++||+++|+|++++++++++|+++.+||++|+++|+|.++
T Consensus 323 ~ve~HgtgT~~~D~~E~~al~~~fg~~~--~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~ 400 (437)
T 2gqd_A 323 YLNAHGTSTPVGDLNEVKAIKNTFGEAA--KHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECD 400 (437)
T ss_dssp EEECCCCSCHHHHHHHHHHHHHHHGGGG--TSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSCCSSCC
T ss_pred EEEEECCCCcCcCHHHHHHHHHHHhccC--CCceeecchhhhcCChhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCCCCC
Confidence 9999999999999999999999998643 46899999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 322 DNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 322 ~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
+++++ ...+..+.+++++|||||||+|+|+||++|+
T Consensus 401 ~~~v~-~~~~~~~~~~a~~~sfGfGG~na~~vl~~~~ 436 (437)
T 2gqd_A 401 LDIVP-NEAQDLDITYAMSNSLGFGGHNAVLVFKKFE 436 (437)
T ss_dssp SBCCB-SSCEECCCSEEEEEEECGGGEEEEEEEECCC
T ss_pred cccCC-CccccCCCCEEEEccCcCCCeeEEEEEEecc
Confidence 99988 5556678899999999999999999999985
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-69 Score=512.66 Aligned_cols=350 Identities=47% Similarity=0.813 Sum_probs=328.9
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 82 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (358)
+++++.++|||+++|+++|+++||+|||+++++++ ..++||++|++.+++...+..+..+...+...++|+.++++..|
T Consensus 77 i~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~-~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (427)
T 3ho9_A 77 ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEEN-ATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVN 155 (427)
T ss_dssp SCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCTTT-GGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTT
T ss_pred CCHHHHhhCCHHHHHHHHHHHHHHHHCCCCccccc-ccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccch
Confidence 67889999999999999999999999999998884 88999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCC
Q 018323 83 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 162 (358)
Q Consensus 83 ~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 162 (358)
.++++|++.||++||+++|+++|+|++.||..|+++|++|++|++||+|+|.++++..+..+...+.++.. ...+...|
T Consensus 156 ~~a~~is~~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~-~~~~~~~~ 234 (427)
T 3ho9_A 156 MVAGHLTIMYGLRGPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTR-NDNPQAAS 234 (427)
T ss_dssp HHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-TTCHHHHC
T ss_pred HHHHHHHHHhCCCCCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhccCcccC-CCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999988888743 23355679
Q ss_pred CCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 018323 163 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDY 242 (358)
Q Consensus 163 ~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~ 242 (358)
+||+.+++|+++||||+++||++++.|+++|.+++++|+|++.++|+.+.+.|.+...++.++++++|+++|++++||||
T Consensus 235 ~pfd~~~~G~v~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ 314 (427)
T 3ho9_A 235 RPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGY 314 (427)
T ss_dssp CTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGGCCE
T ss_pred CCccCCCCCceeeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHHccE
Confidence 99999999999999999999999999999999999999999999999998888888899999999999999999999999
Q ss_pred EEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 018323 243 VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFND 322 (358)
Q Consensus 243 i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~ 322 (358)
||+|||||+.+|.+|..++.++|+... .++++++.|.++||+++|||++++++++++|++++|||++|+++|+|.+++
T Consensus 315 ve~HgtgT~~~d~~e~~a~~~~~g~~~--~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~ 392 (427)
T 3ho9_A 315 VNAHGTSTPAGDKAEAQAVKTIFGEAA--SRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDL 392 (427)
T ss_dssp EECCCCSCHHHHHHHHHHHHHHHGGGG--GTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCC
T ss_pred EEecCCcCCCcCHHHHHHHHHHhcccC--CCeEEecchHhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCc
Confidence 999999999999999999999998643 468999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCC-CCcEEEeeccccccceeeeEeeec
Q 018323 323 NFMPLTASKDM-PISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 323 ~~~~~~~~~~~-~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
++++ ...+.. +.+++++|||||||+|+|+||++|
T Consensus 393 ~~~~-~~~~~~~~~~~a~~~sfGfgG~na~~vl~~~ 427 (427)
T 3ho9_A 393 DFVP-HEARQVSGMEYTLCNSFGFGGTNGSLIFKKI 427 (427)
T ss_dssp BCCB-SSCEECSSCCEEEEEEEETTTEEEEEEEECC
T ss_pred cccc-cccccCCCCCEEEEeCccCCceeEEEEEEeC
Confidence 9888 455555 789999999999999999999986
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-68 Score=506.29 Aligned_cols=351 Identities=55% Similarity=0.888 Sum_probs=331.5
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCCCCCC-CCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKWLPSD-QGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILI 81 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~-~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (358)
+++++.++|||+++|+++|+++||+|||+++++ ++ ..++||++|++.+++...+.++..+.+.+...++|+.+++...
T Consensus 76 i~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~~id-~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (428)
T 3kzu_A 76 MDPKEQRKVDPFIVYAVGAADQALDDAGWHPENDED-QVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLI 154 (428)
T ss_dssp SCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHH-HHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCT
T ss_pred CCHHHHHhCCHHHHHHHHHHHHHHHhcCCChhhhcc-ccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchh
Confidence 678999999999999999999999999999876 63 6789999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCC
Q 018323 82 NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 161 (358)
Q Consensus 82 ~~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 161 (358)
+..+++|++.||++||+++|+++|+|++.||..|+++|++|++|++||+|+|.+.++..+..+...+.++......+...
T Consensus 155 ~~~a~~is~~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 234 (428)
T 3kzu_A 155 NLASGHVSIKHKLRGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAA 234 (428)
T ss_dssp THHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGT
T ss_pred hhHHHHHHHHcCCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHccccccCccCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998887655667789
Q ss_pred CCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcc
Q 018323 162 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVD 241 (358)
Q Consensus 162 ~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did 241 (358)
++|||.+++|+++||||+++||++++.|+++|.+++++|+|++.++|+.+.+.|.+...++.++++++|+++|++|+|||
T Consensus 235 ~~pfd~~~~G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId 314 (428)
T 3kzu_A 235 SRPYDEDRDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDEID 314 (428)
T ss_dssp CCTTBTTCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCC
T ss_pred cCCcccCCCceeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHee
Confidence 99999999999999999999999999999999999999999999999999888888888999999999999999999999
Q ss_pred EEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCC
Q 018323 242 YVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFN 321 (358)
Q Consensus 242 ~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~ 321 (358)
|||+||||| .+|.+|..++.+.|+... .++++++.|.++||+++|+|++++++++++|++++|||++|+++|+|.++
T Consensus 315 ~ve~HgtgT-~~d~~e~~al~~~~g~~~--~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~ 391 (428)
T 3kzu_A 315 YINAHGTST-MADTIELGAVERVVGEAA--AKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQTR 391 (428)
T ss_dssp EEECCCCSS-TTHHHHHHHHHHHHGGGG--GGCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBSSCCS
T ss_pred EEEecCCcc-hhhHHHHHHHHHHhccCC--CceeeCCchhhhCCCchhhHHHHHHHHHHHhccCccCCCCCCCCCCCCCC
Confidence 999999999 999999999999998754 46899999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 322 DNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 322 ~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
+++++ ...+..+.+++++|||||||+|+|+||++|+
T Consensus 392 ~~~~~-~~~~~~~~~~a~~~sfGfgG~na~~vl~~~~ 427 (428)
T 3kzu_A 392 IDLVP-HKPRERKIDVALSNSFGFGGTNASLVLRRYT 427 (428)
T ss_dssp SBCCB-SSCEECCCSEEEEEEEETTTEEEEEEEECCC
T ss_pred cccCC-CCCcCCCCCEEEEeCcccChhhEEEEEeecC
Confidence 99988 5556678899999999999999999999985
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-68 Score=508.10 Aligned_cols=349 Identities=52% Similarity=0.820 Sum_probs=323.5
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCCCC-CCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKWLP-SDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILI 81 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~-~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (358)
+++++.++|||+++|+++++++||+|||+++ ++++ ..++||++|++.+++...++++..+.+++...++|+.+++.+.
T Consensus 86 ~~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~~i~-~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 164 (438)
T 2iwz_A 86 VSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQSEAD-QVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILV 164 (438)
T ss_dssp SCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHH-HHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCT
T ss_pred CCHHHHHhcCHHHHHHHHHHHHHHHHcCCCCccccc-CcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhh
Confidence 5788899999999999999999999999987 6553 6789999999999998888888888888888999999999999
Q ss_pred hHHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCC
Q 018323 82 NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 161 (358)
Q Consensus 82 ~~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 161 (358)
+.++++|++.||++||+++|+++|+|++.||..|+++|++|++|++||+|+|.++++..+..|...+.++.. ..|+..
T Consensus 165 ~~~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~--~~p~~~ 242 (438)
T 2iwz_A 165 NMAAGQVSIRYKLKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTN--SDPKLA 242 (438)
T ss_dssp THHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC--SCTTTS
T ss_pred hHHHHHHHHHhCCCCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhcCCcCCC--CCCCcc
Confidence 999999999999999999999999999999999999999999999999999988889888888888887642 235788
Q ss_pred CCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcc
Q 018323 162 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVD 241 (358)
Q Consensus 162 ~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did 241 (358)
|+|||.+++|+++|||++++||++++.|+++|.+++++|+|++.++|+.+.+.|++...++.++++++|+++|++|+|||
T Consensus 243 ~~pfd~~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~dId 322 (438)
T 2iwz_A 243 CRPFHPKRDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEIS 322 (438)
T ss_dssp CCTTCTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCC
T ss_pred cccCCCCCCCEEeeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcC
Confidence 99999999999999999999999999999999999999999999999998888888888999999999999999999999
Q ss_pred EEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCC
Q 018323 242 YVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFN 321 (358)
Q Consensus 242 ~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~ 321 (358)
|||+|+|||+.+|.+|..++.++|+... .++++++.|+++||+++|+|++++++++++|+++.|||++|+++|+|.++
T Consensus 323 ~ve~HgtgT~~gD~~E~~al~~~fg~~~--~~~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~ 400 (438)
T 2iwz_A 323 YINAHATSTPLGDAAENKAIKHLFKDHA--YALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFD 400 (438)
T ss_dssp EEECCCCSCHHHHHHHHHHHHHHHGGGG--GTSEEECCHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSCCCTTCC
T ss_pred EEEecCCCCcccCHHHHHHHHHHHhccC--CCcceecchhhhcCCHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCC
Confidence 9999999999999999999999997643 46899999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCCC---CcEEEeeccccccceeeeEeeec
Q 018323 322 DNFMPLTASKDMP---ISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 322 ~~~~~~~~~~~~~---~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
+++++ .+.++++ .+++++|||||||+|+|+||+++
T Consensus 401 ~~~v~-~~~~~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 438 (438)
T 2iwz_A 401 LNYVP-LKAQEWKTEKRFIGLTNSFGFGGTNATLCIAGL 438 (438)
T ss_dssp SBCCB-SSCEECCCSSSCEEEEEEEETTTEEEEEEEECC
T ss_pred ccccC-CCcccCCCCCccEEEEecCcCCCeeEEEEEeeC
Confidence 99888 4444454 89999999999999999999986
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-68 Score=506.55 Aligned_cols=346 Identities=40% Similarity=0.622 Sum_probs=318.9
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 82 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (358)
+++++.++|||+++|+++++++||+|||+++++++ ..++|||+|++.+++...+.+...+.+.+...++|+.+++.+.+
T Consensus 81 i~~~~~~~~d~~~~l~~~aa~~Al~dAGl~~~~i~-~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (428)
T 3mqd_A 81 VDRRAMRFHGRGTAWNHIAMDQAIADAGLTEEEVS-NERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSS 159 (428)
T ss_dssp SCTGGGTTCCHHHHHHHHHHHHHHHHHTCCHHHHS-STTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTT
T ss_pred CCHHHHhhCCHHHHHHHHHHHHHHHHcCCChhHcc-ccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhcccccc
Confidence 57889999999999999999999999999987774 88999999999999888888888888889999999999999999
Q ss_pred HHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCC
Q 018323 83 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 162 (358)
Q Consensus 83 ~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 162 (358)
.++.+|++.||++||+++|+++|+|++.||..|+++|++|++|++||+|+|.+ ++.....+...+.++......|+..|
T Consensus 160 ~~a~~ia~~lgl~gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~-s~~~~~~~~~~~~ls~~~~~~p~~~~ 238 (428)
T 3mqd_A 160 TASATLATFFKIKGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDL-DWTLSVLFDAMGAMSSKYNDTPSTAS 238 (428)
T ss_dssp HHHHHHHHHTTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECC-CHHHHHHHHHTTCBCCTTTTSGGGSC
T ss_pred HHHHHHHHHcCCCCceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeeccc-chHHHHHHHHhhhhcccccCCccccc
Confidence 99999999999999999999999999999999999999999999999999995 45555568888888866566688899
Q ss_pred CCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 018323 163 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDY 242 (358)
Q Consensus 163 ~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~ 242 (358)
+|||.+++|+++||||+++||++++.|+++|.++|++|+|++.++|+.+++.| ...++.++++++|+ |++ +||||
T Consensus 239 rpfd~~~~G~v~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P--~~~~~~~ai~~Al~--gl~-~dId~ 313 (428)
T 3mqd_A 239 RAYDKNRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAP--SGEGAIRCMKMALS--TVT-SKIDY 313 (428)
T ss_dssp CTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSC--CSHHHHHHHHHHHT--TCC-SCCCE
T ss_pred CcccCCCCCcccccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCC--CHHHHHHHHHHHHh--CCc-cccCE
Confidence 99999999999999999999999999999999999999999999999988777 67889999999999 999 99999
Q ss_pred EEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCC-
Q 018323 243 VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFN- 321 (358)
Q Consensus 243 i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~- 321 (358)
||+|||||+.+|.+|..++.++|+... ..+++++.|+++||+++|||++++++++++|++++|||++|+++|+|.++
T Consensus 314 ve~HgtgT~~~D~~E~~al~~~~~~~~--~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~ 391 (428)
T 3mqd_A 314 INPHATSTPAGDAPEIEAIRQIFGAGD--VCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFAD 391 (428)
T ss_dssp EECCCCSCHHHHHHHHHHHHHHHCSGG--GSCCBCCTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTT
T ss_pred EEEeCCCCCCcCHHHHHHHHHHhcccC--CCceeecchhhhcccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCccccc
Confidence 999999999999999999999998432 24799999999999999999999999999999999999999999999986
Q ss_pred CCCCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 322 DNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 322 ~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
+++++ ...+..+.+++++|||||||+|+|+||++|+
T Consensus 392 ~~~~~-~~~~~~~~~~~~~~sfGfGG~Na~~vl~~~~ 427 (428)
T 3mqd_A 392 MPIVR-KRIDNVQLNTVLSNSFGFGGTNATLVFQRYQ 427 (428)
T ss_dssp SCBCS-SCEESCCCCEEEEEEEETTTEEEEEEEECCC
T ss_pred CCccC-CccccCCCCEEEEecCcCCcceEEEEEeecC
Confidence 77776 4444467899999999999999999999985
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-68 Score=508.03 Aligned_cols=352 Identities=49% Similarity=0.787 Sum_probs=331.2
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 82 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (358)
+++++.++|||+++|+++|+++||+|||++++++.+..++||++|++.+++...+.++..+...+...++|+.+++...|
T Consensus 91 i~~~~~~~~d~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (451)
T 4ddo_A 91 VPHKELRKMDRFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSN 170 (451)
T ss_dssp SCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTT
T ss_pred CCHHHHhhCCHHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccc
Confidence 57889999999999999999999999999988762378999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCC
Q 018323 83 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 162 (358)
Q Consensus 83 ~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 162 (358)
..+++|++.||++||+++|+++|+|++.||..|+++|++|++|+|||+|+|.++.+..+..+...+.++..+...+...+
T Consensus 171 ~~a~~ia~~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 250 (451)
T 4ddo_A 171 LAAGQISIKHRFRGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVRAS 250 (451)
T ss_dssp HHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGSC
T ss_pred hHHHHHHHHhcCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHHhhhccCCCcCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998876666677899
Q ss_pred CCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 018323 163 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDY 242 (358)
Q Consensus 163 ~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~ 242 (358)
+|||.+++|+++||||+++||++++.|+++|.+++++|+|++.++|+.+...+.+...++.++++++|+++|++++||||
T Consensus 251 ~pfd~~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~dId~ 330 (451)
T 4ddo_A 251 RPFDRDRDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDY 330 (451)
T ss_dssp CTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCE
T ss_pred cccccCCCCcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHcCE
Confidence 99999999999999999999999999999999999999999999999888888778889999999999999999999999
Q ss_pred EEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCC-C
Q 018323 243 VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF-N 321 (358)
Q Consensus 243 i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~-~ 321 (358)
||+|+|||+.+|.+|..++.++|+.. .++++++.|+++||+++|||++++++++++|++++|||++|+++|+|.+ +
T Consensus 331 ve~Hgtgt~~~d~~E~~al~~~~~~~---~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~ 407 (451)
T 4ddo_A 331 VNAHATSTPVGDAGEIEALKTVFGVG---AGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPAADG 407 (451)
T ss_dssp EECCCCSCHHHHHHHHHHHHHHHCSS---SSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTT
T ss_pred EEecCCcCcccCHHHHHHHHHHhCCC---CCCcccCchhhhccCHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCccccc
Confidence 99999999999999999999999862 5689999999999999999999999999999999999999999999999 7
Q ss_pred CCCCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 322 DNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 322 ~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
+++++ ...+..+.+++++|||||||+|+|+||++++
T Consensus 408 ~~~~~-~~~~~~~~~~a~~~sfgfgG~na~~vl~~~~ 443 (451)
T 4ddo_A 408 LDLIG-PAARHVPVEIALSNGFGFGGVNASVLFRRYP 443 (451)
T ss_dssp SEECC-SSCEECCCSEEEEEEEETTTEEEEEEEEESC
T ss_pred ccccC-CCCCCCCcCEEEEeeEcCCCceEEEEEeeCC
Confidence 88887 5556678899999999999999999999975
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-68 Score=506.35 Aligned_cols=351 Identities=31% Similarity=0.523 Sum_probs=321.6
Q ss_pred CccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHH--HhcccCCCCcchhhh
Q 018323 2 RTRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMIC--EKRLRRLSPFFIPRI 79 (358)
Q Consensus 2 ~~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 79 (358)
++++++.++|||+++|+++++++||+|||+++++++ ..++||++|++.+++...++++..+. .++...++|+.++..
T Consensus 61 ~i~~~~~~~~d~~~~l~l~aa~~AL~dAG~~~~~i~-~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (424)
T 1tqy_A 61 GFGPRELDRMDRASQFAVACAREAFAASGLDPDTLD-PARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHM 139 (424)
T ss_dssp TCCHHHHHHSCHHHHHHHHHHHHHHHHHTCCTTTCC-GGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTT
T ss_pred CCCHHHHHhcCHHHHHHHHHHHHHHHHCCCCchhcC-CCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhccc
Confidence 478899999999999999999999999999998884 88999999999999988888887776 556667778777776
Q ss_pred hhhHHHH----HHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccC
Q 018323 80 LINMASG----HVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYN 155 (358)
Q Consensus 80 ~~~~~a~----~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~ 155 (358)
+++..++ +|++.||++||+++|+++|+|++.||..|+++|++|++|++||+|+|.++++..+..+...+.++.. .
T Consensus 140 ~~~~~a~~~~~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~-~ 218 (424)
T 1tqy_A 140 FDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTAR-N 218 (424)
T ss_dssp HHHHSTTHHHHHHHHHHTCCSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-C
T ss_pred ccccccchhHhHHHHhcCCCCceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHHHHhhccccCC-C
Confidence 6665555 9999999999999999999999999999999999999999999999998889888888888887643 3
Q ss_pred CCCCCCCCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCC
Q 018323 156 GTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGL 235 (358)
Q Consensus 156 ~~~~~~~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl 235 (358)
.+|+..|+|||.+++|+++|||++++||++++.|+++|.+++++|+|++.++|+.+.+.|++.+.++.++++++|+++|+
T Consensus 219 ~~p~~~~rpfd~~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~agl 298 (424)
T 1tqy_A 219 DDPEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRT 298 (424)
T ss_dssp SCGGGCCCTTBTTCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCCCccCCCCCCCceeeecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 34678999999999999999999999999999999999999999999999999998888888888999999999999999
Q ss_pred CCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCC
Q 018323 236 QSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAK 315 (358)
Q Consensus 236 ~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~ 315 (358)
+|+||||||+|+|||+.+|.+|..++.++|+... .++++++.|+++||+++|+|++++++++++|+++.+||++|+++
T Consensus 299 ~~~dId~ve~Hgtgt~~gD~~E~~al~~~f~~~~--~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~ 376 (424)
T 1tqy_A 299 DATDIDYINAHGSGTRQNDRHETAAYKRALGEHA--RRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRT 376 (424)
T ss_dssp CGGGCCEEECCCCCCHHHHHHHHHHHHHHTGGGG--GGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCS
T ss_pred CHHHCCEEEecCccCcCcCHHHHHHHHHHhcccC--CCCeeeccccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCCC
Confidence 9999999999999999999999999999998643 46899999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 316 PDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
|+|.+++++++ .+.+.++.+++++|+|||||+|+|+||+++
T Consensus 377 ~~p~~~~~~v~-~~~~~~~~~~a~~~sfG~GG~n~~~vl~~~ 417 (424)
T 1tqy_A 377 SDPECDLDYVP-LEARERKLRSVLTVGSGFGGFQSAMVLRDA 417 (424)
T ss_dssp BBTTBCSCCCB-SSCEECCCSEEEEEEEETTTEEEEEEEECH
T ss_pred CCCCCCcccCC-CcccCCCCCEEEEccccCCceEEEEEEccC
Confidence 99999999988 556667789999999999999999999986
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-67 Score=502.21 Aligned_cols=349 Identities=54% Similarity=0.882 Sum_probs=326.5
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 82 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (358)
+++++.++|||+++|+++++++||+|||+++++++ ..++||++|++.+++..+++++..+..++...++|+.++..+++
T Consensus 60 ~~~~~~~~~d~~~~l~~~aa~~AL~dAGl~~~~id-~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (408)
T 1j3n_A 60 LDRKELRRLDRFVQYALIAAQLALEDAGLKPEDLD-PERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIAN 138 (408)
T ss_dssp SCHHHHTTSCHHHHHHHHHHHHHHHHHTCCGGGSC-GGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTT
T ss_pred CCHHHHHhcCHHHHHHHHHHHHHHHHcCCCccccC-CCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhh
Confidence 57889999999999999999999999999988874 78999999999999998888888888889999999999999999
Q ss_pred HHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCC
Q 018323 83 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 162 (358)
Q Consensus 83 ~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 162 (358)
.++.+|++.||++||+++|+++|+|++.||..|+++|++|++|++||+|+|..+++..+..+...+.++. +...|+..|
T Consensus 139 ~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~-~~~~p~~~~ 217 (408)
T 1j3n_A 139 MASAHIAMRYGFTGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALST-RNEEPEKAS 217 (408)
T ss_dssp HHHHHHHHHHTCCSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC-CTTCHHHHC
T ss_pred HHHHHHHHHhCCCCceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhcccccC-CCCCCCcCc
Confidence 9999999999999999999999999999999999999999999999999999889988888888888874 234456789
Q ss_pred CCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 018323 163 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDY 242 (358)
Q Consensus 163 ~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~ 242 (358)
+|||..++|+++|||++++||++++.|+++|.+++++|+|++.++|+.+.+.|++...++.++++++|+++|++|+||||
T Consensus 218 ~pfd~~~dg~v~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ 297 (408)
T 1j3n_A 218 RPFTLSRDGFVMGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGY 297 (408)
T ss_dssp CTTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCE
T ss_pred ccCcCCCCceEEeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCE
Confidence 99999999999999999999999999999999999999999999999998888888889999999999999999999999
Q ss_pred EEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 018323 243 VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFND 322 (358)
Q Consensus 243 i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~ 322 (358)
||+|+|||+.+|.+|..++.++|+... .++++++.|.++||+++|||++++++++++|++++|||++|+++|+|.+++
T Consensus 298 ve~Hgtgt~~gD~~E~~al~~~~g~~~--~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~ 375 (408)
T 1j3n_A 298 INAHGTSTPVGDRAEVLAIKRVFGDHA--KRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDL 375 (408)
T ss_dssp EECCCCSCHHHHHHHHHHHHHHHHHHH--TTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCS
T ss_pred EEEeCCcCcccCHHHHHHHHHHhcCcC--CCceEECchhhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCc
Confidence 999999999999999999999998643 468999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 323 NFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 323 ~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
++++ +.+.++.+++++|||||||+|+|+||++|
T Consensus 376 ~~v~--~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 408 (408)
T 1j3n_A 376 DFVP--EPREAKVDYALSNSFAFGGHNAVLAFKRV 408 (408)
T ss_dssp BCCS--SCEECCCSEEEEEEECTTSEEEEEEEECC
T ss_pred ccCC--CCcCCCCCEEEEecccCCcceEEEEEecC
Confidence 9887 45567789999999999999999999986
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-67 Score=500.79 Aligned_cols=347 Identities=44% Similarity=0.671 Sum_probs=324.5
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 82 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (358)
+++++.++|||+++|+++++++||+|||+++++++ ..++||++|++.+++...++++..+.+++...++|+.++..+.+
T Consensus 82 ~~~~~~~~~d~~~~l~l~aa~~AL~dAG~~~~~i~-~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (430)
T 1ox0_A 82 FVKKDTNRFDNYSLYALYAAQEAVNHANLDVEALN-RDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPN 160 (430)
T ss_dssp CCGGGGGTCCHHHHHHHHHHHHHHHHTTCCTTTSC-GGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTT
T ss_pred CCHHHHHhcCHHHHHHHHHHHHHHHHcCCChhhcC-ccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchh
Confidence 56788999999999999999999999999988874 88999999999999888888888888889999999999999999
Q ss_pred HHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCC
Q 018323 83 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 162 (358)
Q Consensus 83 ~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 162 (358)
.++++|++.||++||+++|+++|+|++.||..|+++|++|++|++||+|+|.++++..+..+...+.++. ...|+..|
T Consensus 161 ~~a~~is~~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~--~~~p~~~~ 238 (430)
T 1ox0_A 161 MASGNVAMRFGANGVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALST--TEDPTRAS 238 (430)
T ss_dssp HHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC--CSSTTSSS
T ss_pred HHHHHHHHHhcCCCceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhCCCccC--CCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999888888888888877763 23467889
Q ss_pred CCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 018323 163 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDY 242 (358)
Q Consensus 163 ~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~ 242 (358)
+|||.+++|+++||||+++||++++.|+++|.+++++|+|++.++|+.+.+.|++...++.++++++|+++|++++||||
T Consensus 239 ~pFd~~~~g~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ 318 (430)
T 1ox0_A 239 IPFDKDRNGFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAY 318 (430)
T ss_dssp CTTBTTCCSBCBCCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCC
T ss_pred CCCCCCCCCccccceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHHcCE
Confidence 99999999999999999999999999999999999999999999999988888878889999999999999999999999
Q ss_pred EEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 018323 243 VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFND 322 (358)
Q Consensus 243 i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~ 322 (358)
||+|+|||+.+|..|..++.++|+. +++++++|+++||+++|+|++++++++++|+++.|||++|+++|+|.+++
T Consensus 319 ve~Hgtgt~~~D~~E~~al~~~~g~-----~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~ 393 (430)
T 1ox0_A 319 VNAHGTSTPANEKGESGAIVAVLGK-----EVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEA 393 (430)
T ss_dssp EECCCCSCHHHHHHHHHHHHHHHCS-----SSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCS
T ss_pred EEEeCCcCcccCHHHHHHHHHHhCC-----CceecccccccccchhhHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCc
Confidence 9999999999999999999999974 48999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 323 NFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 323 ~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
++++ .+.+..+.+++++|||||||+|+|+||++|+
T Consensus 394 ~~v~-~~~~~~~~~~a~~~sfGfGG~na~~vl~~~~ 428 (430)
T 1ox0_A 394 NVVY-GQGLEKEIPYAISNTFGFGGHNAVLAFKRWE 428 (430)
T ss_dssp EECB-SSCEECCCSEEEEEEEETTTEEEEEEEECCC
T ss_pred ccCC-CCCcCCCCCEEEEeCccCCCceEEEEEeecC
Confidence 8887 4555667899999999999999999999974
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-67 Score=499.32 Aligned_cols=344 Identities=26% Similarity=0.361 Sum_probs=322.0
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 82 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (358)
+++++.++|||+++|+++++++||+|||+++++++ ..++||++|++.+++...+++++.+.+++...++|+.+++...+
T Consensus 68 ~~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~id-~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (415)
T 1tqy_B 68 IPGRLLPQTDPSTRLALTAADWALQDAKADPESLT-DYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYA 146 (415)
T ss_dssp SCTTTGGGCCHHHHHHHHHHHHHHHHTTCCGGGSC-GGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTT
T ss_pred CCHHHHHhcCHHHHHHHHHHHHHHHHcCCCccccC-CCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccch
Confidence 57788999999999999999999999999988874 88999999999999999999999898899999999999999999
Q ss_pred HHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCC
Q 018323 83 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 162 (358)
Q Consensus 83 ~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 162 (358)
.++++|++.||++||+++|+++|+|++.||..|+++|++| +|++||+|+|.++++..+..+...+.++. +..++..|
T Consensus 147 ~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~~~ls~--~~~~~~~~ 223 (415)
T 1tqy_B 147 VNTGQISIRHGMRGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIST--ATDPDRAY 223 (415)
T ss_dssp HHHHHHHHHHTCCSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCC--CSCGGGSC
T ss_pred HHHHHHHHHhCCCCceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhccCccC--CCCCCCCc
Confidence 9999999999999999999999999999999999999999 99999999999889998888888888874 23356789
Q ss_pred CCCcCCCCceeeecceEEEEeccHHHHHhcCC-eeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcc
Q 018323 163 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGA-KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVD 241 (358)
Q Consensus 163 ~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~-~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did 241 (358)
+|||.+++|+++|||++++||++++.|+++|. ++|++|+|++.++|+.+.+.|++ ++.++++++|+++|++|+|||
T Consensus 224 ~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~---~~~~ai~~al~~Agl~~~dId 300 (415)
T 1tqy_B 224 LPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPA---GLERAIRLALNDAGTGPEDVD 300 (415)
T ss_dssp CTTSTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCC---SHHHHHHHHHHHHTCCGGGCC
T ss_pred CCCCCCCCCcceeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCH---HHHHHHHHHHHHcCCCHhHCC
Confidence 99999999999999999999999999999999 99999999999999998888865 788999999999999999999
Q ss_pred EEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCC
Q 018323 242 YVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFN 321 (358)
Q Consensus 242 ~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~ 321 (358)
|||+|||||+.+|.+|..++.++|+.. .+++++.|+++||+++|+|++++++++++|+++.+||++|+++|+|.++
T Consensus 301 ~ve~Hgtgt~~~D~~E~~al~~~~g~~----~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~ 376 (415)
T 1tqy_B 301 VVFADGAGVPELDAAEARAIGRVFGRE----GVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYG 376 (415)
T ss_dssp EEECCCCCSHHHHHHHHHHHHHHHCTT----CSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGC
T ss_pred EEEEeCCCCcCcCHHHHHHHHHHhCCC----CceEeccchhhccChHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCC
Confidence 999999999999999999999999754 3899999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 322 DNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 322 ~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
+++++ .+.+.++.+++++|+|||||+|+|+||++++
T Consensus 377 ~~~v~-~~~~~~~~~~a~~~sfGfgG~n~~~vl~~~~ 412 (415)
T 1tqy_B 377 IDLVL-GEPRSTAPRTALVLARGRWGFNSAAVLRRFA 412 (415)
T ss_dssp CEECB-SSCBCCCCSEEEEEEEETTTEEEEEEEEEC-
T ss_pred ccccC-CCCccCCCCEEEEecCcCCCeEEEEEEecCC
Confidence 98887 5566678999999999999999999999974
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-67 Score=503.76 Aligned_cols=346 Identities=79% Similarity=1.238 Sum_probs=323.3
Q ss_pred cCCHHHHHHHHHHHHHHHHCCC-CCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHH
Q 018323 10 SIARFIAYALCAADEALHDAKW-LPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHV 88 (358)
Q Consensus 10 ~~~~~~~l~~~aa~~Al~dAG~-~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i 88 (358)
+|||+++|+++++++||+|||+ ++++++ .+++||++|++.+++...++++..+.+.+...++|+.+++.+.+.++++|
T Consensus 84 ~~d~~~~l~l~aa~~AL~dAG~~~~~~i~-~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~i 162 (431)
T 2ix4_A 84 AVANFIGYAVCAADEALRDAEWLPTEEEE-KERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHV 162 (431)
T ss_dssp TCCHHHHHHHHHHHHHHHHTTCCCCSHHH-HHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHcCCCCccccC-CCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHH
Confidence 8999999999999999999999 877663 67899999999999988888888888888889999999999999999999
Q ss_pred HHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCC
Q 018323 89 SMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 168 (358)
Q Consensus 89 a~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~ 168 (358)
++.||++||+++|+++|+|++.||..|+++|++|++|++||+|+|.++++..+..+...+.++..++.+++..|+|||..
T Consensus 163 a~~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~ 242 (431)
T 2ix4_A 163 SMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCD 242 (431)
T ss_dssp HHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSCCTTBTT
T ss_pred HHHHCCCCceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccccCccccCCcccccccCCCC
Confidence 99999999999999999999999999999999999999999999998999888888888888877777788999999999
Q ss_pred CCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q 018323 169 RDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 248 (358)
Q Consensus 169 ~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~ 248 (358)
++|+++||||+++||++++.|+++|.+++++|+|++.++|+.+++.|++...++.++++++|+++|++++||||||+|||
T Consensus 243 ~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~Hgt 322 (431)
T 2ix4_A 243 RDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHAT 322 (431)
T ss_dssp CCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCC
T ss_pred CCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCC
Confidence 99999999999999999999999999999999999999999988888778889999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccc
Q 018323 249 STPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLT 328 (358)
Q Consensus 249 gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~ 328 (358)
||+.+|.+|..++..+|+....+.++++++.|+++||+++|+|++++++++++|+++.|||++|+++|+|.+++++++ .
T Consensus 323 gT~~~D~~E~~al~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~-~ 401 (431)
T 2ix4_A 323 STPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMP-L 401 (431)
T ss_dssp SCHHHHHHHHHHHHHHHTHHHHTSCSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSSSCC-C
T ss_pred cCcccCHHHHHHHHHHHcccccCCCceeecchhhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcccCC-c
Confidence 999999999999999997644345689999999999999999999999999999999999999999999999999888 4
Q ss_pred cCCCC-CCcEEEeeccccccceeeeEeeec
Q 018323 329 ASKDM-PISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 329 ~~~~~-~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
+.+.+ +.+++++|||||||+|+|+||++|
T Consensus 402 ~~~~~~~~~~a~~~sfGfGG~na~~il~~~ 431 (431)
T 2ix4_A 402 TTSKKMLVRTAMSNSFGFGGTNASLLFASI 431 (431)
T ss_dssp SSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred cccccCCCCEEEEecccCCCeeEEEEEeeC
Confidence 44555 789999999999999999999986
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-66 Score=494.59 Aligned_cols=346 Identities=35% Similarity=0.562 Sum_probs=321.6
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 82 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (358)
+++++.++|||+++|+++++++||+|||+ +++ ++++++||+|++.+++...++++..+..++...++|+.+++.+.+
T Consensus 88 ~~~~~~~~~d~~~~l~l~aa~~ALedAG~--~~~-~~~~igv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 164 (434)
T 2gp6_A 88 LTRIELRRMGYLQRMSTVLSRRLWENAGS--PEV-DTNRLMVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPN 164 (434)
T ss_dssp SCHHHHHTCCHHHHHHHHHHHHHHHHTTC--CCC-CTTSEEEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTT
T ss_pred CCHHHHHhCCHHHHHHHHHHHHHHHhcCC--Ccc-CCCceEEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchh
Confidence 67889999999999999999999999999 344 478999999999999988888888888888889999999999999
Q ss_pred HHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhc-ccccccCCCCCCC
Q 018323 83 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSR-ALTTKYNGTPQEA 161 (358)
Q Consensus 83 ~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~-~l~~~~~~~~~~~ 161 (358)
..+++|++.||++||+++|+++|+|++.||..|+++|++|++|++||+|+|.++.+..+..+...+ .++.. ...++..
T Consensus 165 ~~a~~is~~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~~ls~~-~~~p~~~ 243 (434)
T 2gp6_A 165 GAAAAVGLERHAKAGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTN-NDDPAGA 243 (434)
T ss_dssp HHHHHHHHHSCCCSCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHHHHTTTSSCCCC-TTCTTTS
T ss_pred hHHHHHhhhhcCCCCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHHHHHhcCC-CCCCCCc
Confidence 999999999999999999999999999999999999999999999999999999988888888877 55532 3346788
Q ss_pred CCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcc
Q 018323 162 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVD 241 (358)
Q Consensus 162 ~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did 241 (358)
|+|||.+++|+++|||++++||++++.|+++|.+++++|+|++.++|+.+.+.|++...++.++++++|+++|++++|||
T Consensus 244 ~~pfd~~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId 323 (434)
T 2gp6_A 244 CRPFDRDRDGFVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDID 323 (434)
T ss_dssp CCSSBTTCCCCCBBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTTEE
T ss_pred eecccccCCCcceecceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcC
Confidence 99999999999999999999999999999999999999999999999999888887888999999999999999999999
Q ss_pred EEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCC
Q 018323 242 YVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFN 321 (358)
Q Consensus 242 ~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~ 321 (358)
|||+|+|+|+.+|.+|..++.++|+.. ++++++.|.++||+++|+|++++++++++|+++.+||++|+++|+|.++
T Consensus 324 ~ve~Hgtgt~~~D~~E~~al~~~fg~~----~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~ 399 (434)
T 2gp6_A 324 HVNAHATGTQVGDLAEGRAINNALGGN----RPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEID 399 (434)
T ss_dssp EEECCCCSCHHHHHHHHHHHHHHHTTC----CCEECCTHHHHCBCTTTHHHHHHHHHHHHHHHSCCCCCSSCSSBCTTCC
T ss_pred EEEEeCCcCccchHHHHHHHHHHhccC----CCCcccchhhhcCchhhhHHHHHHHHHHHHhcCccCCCCCCCCCCCCCC
Confidence 999999999999999999999999753 5899999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 322 DNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 322 ~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
+++++ .+.+..+.+++++|||||||+|+|+||++|
T Consensus 400 ~~~v~-~~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 434 (434)
T 2gp6_A 400 LDVVA-GEPRPGNYRYAINNSFGFGGHNVAIAFGRY 434 (434)
T ss_dssp CEECC-SSCCCSCCCEEEEEEEETTTEEEEEEEECC
T ss_pred ccccC-CCccCCCCCEEEEeCCcCCCeeEEEEEEeC
Confidence 99888 555667889999999999999999999986
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-66 Score=494.95 Aligned_cols=345 Identities=37% Similarity=0.595 Sum_probs=320.1
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 82 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (358)
+++++.++|||+++|+++++++||+|||+ +++ +.+++|||+|++.+++...++++..+..++...++|+.+++...+
T Consensus 72 ~~~~~~~~~d~~~~l~l~aa~~AL~dAG~--~~~-~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 148 (416)
T 2wge_A 72 MGRLDMRRMSYVQRMGKLLGGQLWESAGS--PEV-DPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPN 148 (416)
T ss_dssp CCHHHHHHSCHHHHHHHHHHHHHHHHTTC--CCC-CGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTT
T ss_pred CCHHHHHhcCHHHHHHHHHHHHHHHHcCC--Ccc-CCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccch
Confidence 57789999999999999999999999999 445 478999999999999988888888888889999999999999999
Q ss_pred HHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCC
Q 018323 83 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 162 (358)
Q Consensus 83 ~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 162 (358)
..+++|++.||++||+++++++|+|++.||..|+++|++|++|++||+|+|.++.+.....+...+.++.. +..++..|
T Consensus 149 ~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~l~~~-~~~~~~~~ 227 (416)
T 2wge_A 149 GAAAVIGLQLGARAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTR-NDEPERAS 227 (416)
T ss_dssp HHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTTTCBCCC-TTSGGGSC
T ss_pred hHHHHHHHHhccCCCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhcchhhcc-ccCCcccc
Confidence 99999999999999999999999999999999999999999999999999998888888888887777632 34467899
Q ss_pred CCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 018323 163 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDY 242 (358)
Q Consensus 163 ~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~ 242 (358)
+|||.+++|+++|||++++||++++.|+++|.+++++|+|++.++|+.+.+.|++...++.++++++|+++|++++||||
T Consensus 228 ~pfd~~~dg~v~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ 307 (416)
T 2wge_A 228 RPFDKDRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDH 307 (416)
T ss_dssp CTTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCE
T ss_pred cccccCCCCccccCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHCCE
Confidence 99999999999999999999999999999999999999999999999988888778889999999999999999999999
Q ss_pred EEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 018323 243 VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFND 322 (358)
Q Consensus 243 i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~ 322 (358)
||+|||||+.+|.+|..++..+ +. .++++++.|+++||+++|+|++++++++++|+++.+||++|+++|+|.+++
T Consensus 308 ve~HgtgT~~gD~~E~~al~~~-~~----~~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~~ipp~~~~~~~~p~~~~ 382 (416)
T 2wge_A 308 VNAHGTATPIGDAAEANAIRVA-GC----DQAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDL 382 (416)
T ss_dssp EECCCCCCHHHHHHHHHHHHHT-TC----TTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTTCC
T ss_pred EEECCCCCcCCCHHHHHHHHHh-cc----CCCCccCCcccccCcHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCc
Confidence 9999999999999999999988 43 258999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 323 NFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 323 ~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
++++ .+.+..+.+++++|||||||+|+|+||++|
T Consensus 383 ~~v~-~~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 416 (416)
T 2wge_A 383 DVVA-GEPRYGDYRYAVNNSFGFGGHNVALAFGRY 416 (416)
T ss_dssp EECC-SSCEECCCCEEEEEEEETTTEEEEEEEECC
T ss_pred ccCC-CCCccCCCCEEEEeCcccCceeEEEEEEeC
Confidence 9887 455556789999999999999999999986
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-67 Score=498.86 Aligned_cols=343 Identities=38% Similarity=0.628 Sum_probs=312.9
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCC-CcEEEEEecCCCChHHHHHHHHHHH-HhcccCCCCcchhhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQK-ERTGVSIGGGIGSISDTVDAAQMIC-EKRLRRLSPFFIPRIL 80 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~-~~~gv~~g~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 80 (358)
+++++.++|||+++|+++++++||+|||+++++++ . +++|||+|++.+++...++++..+. +++...++|+.+++.+
T Consensus 60 ~~~~~~~~~d~~~~l~l~aa~~Al~dAg~~~~~i~-~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (406)
T 2vba_A 60 IDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQ-NNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAM 138 (406)
T ss_dssp SCHHHHTTCCHHHHHHHHHHHHHHHHHTCCHHHHT-TCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHS
T ss_pred CCHHHHHhcCHHHHHHHHHHHHHHHHCCCChhHcC-CCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhh
Confidence 67789999999999999999999999999877664 5 8999999999999988888877666 5566678899999999
Q ss_pred hhHHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCC
Q 018323 81 INMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 160 (358)
Q Consensus 81 ~~~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~ 160 (358)
.+.++++|++.||++||+++|+++|+|++.||..|+++|++|++|++||+|+|.++.+..+. |...+.++..+..+|+.
T Consensus 139 ~~~~a~~is~~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~-~~~~~~ls~~~~~~p~~ 217 (406)
T 2vba_A 139 ASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACE-FDAMGALSTKYNDTPEK 217 (406)
T ss_dssp TTHHHHHHHTTTTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-HHHTTCBCCSCTTSGGG
T ss_pred hHHHHHHHHHhccCCCceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHH-HhhccccccccCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999988887766 88888887433334678
Q ss_pred CCCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 018323 161 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQV 240 (358)
Q Consensus 161 ~~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~di 240 (358)
.|+|||.+++|+++|||++++||++++.|+++|.++|++|+|++.++|+.+.+.|+ ..++.++++++|+++| +||
T Consensus 218 ~~~pfd~~~~G~v~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p~--~~~~~~ai~~al~~ag---~dI 292 (406)
T 2vba_A 218 ASRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPS--GEGAVRCMKMAMHGVD---TPI 292 (406)
T ss_dssp SCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSCC--SHHHHHHHHHHHTTCC---SCC
T ss_pred ccCcCcCCCCceEeeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCC--HHHHHHHHHHHHhhCC---CCc
Confidence 89999999999999999999999999999999999999999999999998887775 7789999999999999 899
Q ss_pred cEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Q 018323 241 DYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF 320 (358)
Q Consensus 241 d~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~ 320 (358)
||||+|||||+.+|.+|..++.++|+.. .+++++.|+++||+++|+|++++++++++|+++.+||++|+++|+|.+
T Consensus 293 d~ve~HgtgT~~gD~~E~~al~~~fg~~----~~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~ 368 (406)
T 2vba_A 293 DYLNSHGTSTPVGDVKELAAIREVFGDK----SPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQA 368 (406)
T ss_dssp CEEECCCCSCHHHHHHHHHHHHHHHTTC----CCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTC
T ss_pred cEEEeeCccCcccCHHHHHHHHHHhCcC----CCceeCchhhhcccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCc
Confidence 9999999999999999999999999764 378999999999999999999999999999999999999999999999
Q ss_pred C-CCCCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 321 N-DNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 321 ~-~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
+ +++++ ...+. +.+++++|||||||+|+|+||++|+
T Consensus 369 ~~~~~v~-~~~~~-~~~~a~~~sfGfgG~na~~vl~~~~ 405 (406)
T 2vba_A 369 AGLNIVT-ETTDR-ELTTVMSNSFGFGGTNATLVMRKLK 405 (406)
T ss_dssp TTSEECC-SCEEC-CCCEEEEEEEETTTEEEEEEEECC-
T ss_pred cccccCC-cccCC-CCCEEEEcCCCCCCeEEEEEEEeCC
Confidence 8 88877 33333 7899999999999999999999975
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-64 Score=516.27 Aligned_cols=338 Identities=21% Similarity=0.325 Sum_probs=305.1
Q ss_pred CCccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhh
Q 018323 1 MRTRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRIL 80 (358)
Q Consensus 1 ~~~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (358)
|.+++++.+.|||+++|+++++++||+|||+++++++ +.++|||+|+..+++. .........+.++.+++..
T Consensus 67 f~i~~~ea~~mDp~~rL~leaa~eALedAGi~~~~i~-~~~~Gv~vG~~~~d~~-------~~~~~~~~~~~~~~~~g~~ 138 (965)
T 3hhd_A 67 FGVHPKQAHTMDPQLRLLLEVTYEAIVDGGINPDSLR-GTHTGVWVGVSGSETS-------EALSRDPETLVGYSMVGCQ 138 (965)
T ss_dssp TTCCHHHHHTSCHHHHHHHHHHHHHHHHTTCCGGGGT-TSCCEEEEEECCCHHH-------HHHTSCTTTCCTHHHHHHS
T ss_pred cCCCHHHHhhcCHHHHHHHHHHHHHHHHcCCChHHcC-CceeEEEEeccchhHH-------HHHhcCccccCcccccccc
Confidence 5689999999999999999999999999999998884 8899999998775543 2234566778888999999
Q ss_pred hhHHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCC
Q 018323 81 INMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 160 (358)
Q Consensus 81 ~~~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~ 160 (358)
.++++++|++.||++||+++|+++|+|++.||++|+++|++|+||++||+|+|.++++..+..+...+.++ +++
T Consensus 139 ~~~~a~ris~~lgl~GPs~tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~~~ls------~~g 212 (965)
T 3hhd_A 139 RAMMANRLSFFFDFRGPSIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLS------PEG 212 (965)
T ss_dssp TTHHHHHHHHHHTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHHTCBC------TTC
T ss_pred cchHHHHHHHHhCCCCCeeeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCcC------CCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988 778
Q ss_pred CCCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCC-CCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 018323 161 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH-ITQPHIDGKGAILAMTRALKQSGLQSHQ 239 (358)
Q Consensus 161 ~~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~-~~~~~~~~~~~~~~~~~al~~agl~~~d 239 (358)
.|+|||.+++|+++|||++++||++.++|+ +++++|+|++.++|+.+ .....++..++.++++++|+++|++|+|
T Consensus 213 ~~~~Fd~~adG~~~gEGagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~d 288 (965)
T 3hhd_A 213 TCKAFDTAGNGYCRSEGVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPES 288 (965)
T ss_dssp CCCTTBTTCCSBCBBCEEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGG
T ss_pred ccccchhccCCccccceEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHH
Confidence 999999999999999999999999999885 48999999999999965 3334457889999999999999999999
Q ss_pred ccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Q 018323 240 VDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 319 (358)
Q Consensus 240 id~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~ 319 (358)
|||||+|||||+.+|++|..++.++|+.. ...+++|+++|+++||+++|||++++++++++|++++|||++|+++|+|.
T Consensus 289 IdyvEaHgTgT~~gD~~E~~Al~~~f~~~-~~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~ 367 (965)
T 3hhd_A 289 FEYIEAHGTGTKVGDPQELNGITRALCAT-RQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSPNPE 367 (965)
T ss_dssp EEEEECCCCCCTTHHHHHHHHHHHHHCSS-CSSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCCSBCTT
T ss_pred hccccccCCCCCCCCHHHHHHHHHHhccc-CCCceeeeccccccccchhhhhHHHHHHHHHHHhcCCcCCccCCCCCCcc
Confidence 99999999999999999999999999754 23578999999999999999999999999999999999999999999999
Q ss_pred CCC-C----CCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 320 FND-N----FMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 320 ~~~-~----~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
+++ . .++ .+.++++.+.+++|||||||+|+|+||++++
T Consensus 368 i~~~~~~~~~v~-~~~~~~~~~~a~v~sfG~gG~Nah~il~~~~ 410 (965)
T 3hhd_A 368 IPALLDGRLQVV-DQPLPVRGGNVGINSFGFGGSNVHIILRPNT 410 (965)
T ss_dssp CHHHHHTSEEEC-CSCEECCSCEEEEEEECTTSEEEEEEEEECC
T ss_pred CcccccCceeec-CCCccCCCCeEEEecccCCCceEEEEeccCC
Confidence 862 1 222 4555666778999999999999999999864
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-63 Score=510.02 Aligned_cols=344 Identities=27% Similarity=0.385 Sum_probs=306.3
Q ss_pred CCccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhh
Q 018323 1 MRTRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRIL 80 (358)
Q Consensus 1 ~~~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (358)
|.+++++.++|||+++|+++++++||+|||+++++++ +.++|||+|++.+++... ..+....+.++.+++..
T Consensus 103 f~i~~~ea~~mdp~~rl~leaa~eALedAGi~~~~i~-~~~~gV~vG~~~~d~~~~-------~~~~~~~~~~~~~~g~~ 174 (917)
T 2hg4_A 103 FGISPREALAMDPQQRIMLEISWEALERAGHDPVSLR-GSATGVFTGVGTVDYGPR-------PDEAPDEVLGYVGTGTA 174 (917)
T ss_dssp GTCCHHHHHHSCHHHHHHHHHHHHHHHHTTCCGGGGT-TSCEEEEEEECCCCCSCC-------TTSSCGGGGGGHHHHHC
T ss_pred cCCCHHHHHhcCHHHHHHHHHHHHHHHHcCCChHHcC-CcceEEEEEeCCchhhhh-------hhcCccccCcccccccc
Confidence 5689999999999999999999999999999998874 889999999987665321 11234456777788888
Q ss_pred hhHHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCC
Q 018323 81 INMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 160 (358)
Q Consensus 81 ~~~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~ 160 (358)
.+.++++|++.||++||+++|+++|+|++.||++|+++|++|+||++||+|+|.++.+..+..+...+.++ +++
T Consensus 175 ~~~~a~ris~~lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~~~~~~~~ls------~~g 248 (917)
T 2hg4_A 175 SSVASGRVAYCLGLEGPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLA------ADG 248 (917)
T ss_dssp HHHHHHHHHHHHTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHHHHTTSSCBC------TTS
T ss_pred cchHHHHHHHhcCCCCCeEeecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhHhhhhccCcC------Ccc
Confidence 89999999999999999999999999999999999999999999999999999999998888888888877 678
Q ss_pred CCCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 018323 161 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQV 240 (358)
Q Consensus 161 ~~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~di 240 (358)
.|+|||..++|+++|||++++||+++++|+++|++++++|+|++.++|+.+...+.+...++.++++++|+++|++|+||
T Consensus 249 ~~~pFd~~adG~~~gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dI 328 (917)
T 2hg4_A 249 RCKPFSKAADGFGLAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDV 328 (917)
T ss_dssp CCCTTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGC
T ss_pred ccCcccccccCCCCcceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHC
Confidence 99999999999999999999999999999999999999999999999998876667788999999999999999999999
Q ss_pred cEEEecCCCCCCCcHHHHHHHHHHhhccc-CCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Q 018323 241 DYVNAHATSTPLGDTVEATAIRTVFSDHA-TSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 319 (358)
Q Consensus 241 d~i~~h~~gt~~~d~~E~~a~~~~~~~~~-~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~ 319 (358)
||||+|||||+.+|++|..++.++|+... ...+++++++|+++||+++|+|++++++++++|+++.|||++|+++|+|.
T Consensus 329 d~veaHgtgT~~gD~~E~~al~~~fg~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~ipp~~~~~~~~p~ 408 (917)
T 2hg4_A 329 DYVEAHGTGTRLGDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQ 408 (917)
T ss_dssp CEEECCCCCCTTHHHHHHHHHHTTTTTSSCTTSCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTEECCCTTCCSBCTT
T ss_pred CEEeeccCCCccCcHHHHHHHHHHhccccCCCCceeccCcccceecchhhhHHHHHHHHHHHHhcCCcCCCCCCCCCCcc
Confidence 99999999999999999999999997632 23568899999999999999999999999999999999999999999999
Q ss_pred CCCCCCcc---ccC----CCCCCcEEEeeccccccceeeeEeeecC
Q 018323 320 FNDNFMPL---TAS----KDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 320 ~~~~~~~~---~~~----~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
++++..++ .+. ....++++++|||||||+|+|+||++++
T Consensus 409 i~~~~~~~~v~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~ 454 (917)
T 2hg4_A 409 IEWDLGAVSVVSQARSWPAGERPRRAGVSSFGISGTNAHVIVEEAP 454 (917)
T ss_dssp SCC---CCEECCSCEECCCCSSCCEEEEEEECTTSEEEEEEEEECC
T ss_pred CCccccceeecCCcccCCCCCCCCEEEEeeecCCCceEEEEeccCC
Confidence 98764222 122 2235799999999999999999999864
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-63 Score=507.56 Aligned_cols=343 Identities=26% Similarity=0.379 Sum_probs=307.3
Q ss_pred CCccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhh
Q 018323 1 MRTRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRIL 80 (358)
Q Consensus 1 ~~~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (358)
|.+++++.++|||+++|+++++++||+|||+++++++ +.++|||+|++.+++.... .....++++.+++..
T Consensus 82 f~i~~~ea~~mdp~~rL~leaa~eALedAGi~~~~i~-~~~~gV~vG~~~~~~~~~~--------~~~~~~~~~~~~g~~ 152 (915)
T 2qo3_A 82 FGVSPREAAAMDPQQRLLLETSWELVENAGIDPHSLR-GTATGVFLGVAKFGYGEDT--------AAAEDVEGYSVTGVA 152 (915)
T ss_dssp HTCCHHHHHTSCHHHHHHHHHHHHHHHHTTCCGGGGT-TBCCEEEEECCCCCTTTTC--------C---CTTCHHHHTTC
T ss_pred cCCCHHHHHhCCHHHHHHHHHHHHHHHHcCCChHHcC-CcceEEEEEecCchHHhhh--------ccccccccccccccc
Confidence 4688999999999999999999999999999998874 8899999999877654321 123456788888888
Q ss_pred hhHHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCC
Q 018323 81 INMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 160 (358)
Q Consensus 81 ~~~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~ 160 (358)
.+.++++|++.||++||+++|+++|+|++.||+.|+++|++|+||++||+|+|.+++|..+..+...+.++ +++
T Consensus 153 ~~~~a~ris~~lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~~~ls------~~g 226 (915)
T 2qo3_A 153 PAVASGRISYTMGLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALA------ADG 226 (915)
T ss_dssp HHHHHHHHHHHHTBCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTTTCBC------SSC
T ss_pred ccHHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhhcccC------CCC
Confidence 89999999999999999999999999999999999999999999999999999999998888888888887 678
Q ss_pred CCCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 018323 161 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQV 240 (358)
Q Consensus 161 ~~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~di 240 (358)
.|+|||.+++|+++|||++++||+++++|+++|++++++|+|++.++|+.+...+.+...++.++++++|+++|++|+||
T Consensus 227 ~~~~Fd~~adG~v~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dI 306 (915)
T 2qo3_A 227 RSKAFGAGADGFGFSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDV 306 (915)
T ss_dssp CCCTTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGC
T ss_pred CcccccCCCCceeecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHC
Confidence 99999999999999999999999999999999999999999999999998876677788999999999999999999999
Q ss_pred cEEEecCCCCCCCcHHHHHHHHHHhhccc-CCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Q 018323 241 DYVNAHATSTPLGDTVEATAIRTVFSDHA-TSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 319 (358)
Q Consensus 241 d~i~~h~~gt~~~d~~E~~a~~~~~~~~~-~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~ 319 (358)
||||+|||||+.+|++|..++.++|+... ...++++++.|+++||+++|+|++++++++++|+++.|||++|+++|+|.
T Consensus 307 d~ve~HgtgT~~gD~~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ipp~~~~~~~~p~ 386 (915)
T 2qo3_A 307 DAVEAHGTGTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPH 386 (915)
T ss_dssp CEEECCCCCCTTTHHHHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCSSBCTT
T ss_pred cEEEecCCCCccCCHHHHHHHHHHhccccCCCCcccccCcccceeCCccccchHHHHHHHHHHhcCCCCCCCCCCCCCcc
Confidence 99999999999999999999999998532 23568899999999999999999999999999999999999999999999
Q ss_pred CCCCCCcc-------ccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 320 FNDNFMPL-------TASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 320 ~~~~~~~~-------~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
++++..++ .+++...++++++|||||||+|+|+||++++
T Consensus 387 ~~~~~~~~~~~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~ 432 (915)
T 2qo3_A 387 VDWSSGGVALLAGNQPWRRGERTRRAAVSAFGISGTNAHVIVEEAP 432 (915)
T ss_dssp SCCSSSSEEECSSCEECCSSSSCCEEEEEEECTTSEEEEEEEEECC
T ss_pred cccccCceeeecCCcccccCCCCcEEEEeeecCCCceEEEEEeecc
Confidence 98753221 1122345799999999999999999999864
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-62 Score=541.65 Aligned_cols=338 Identities=22% Similarity=0.317 Sum_probs=304.4
Q ss_pred CCccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhh
Q 018323 1 MRTRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRIL 80 (358)
Q Consensus 1 ~~~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (358)
|.+++++.+.|||+++|+++++++||+|||++++++ +++++|||+|++.+++.. ....+...+.++.+++..
T Consensus 65 f~i~~~ea~~~dpq~rl~l~~~~eAle~Ag~~~~~~-~~~~~gv~~G~~~~~~~~-------~~~~~~~~~~~~~~~g~~ 136 (2512)
T 2vz8_A 65 FGVHSKQANTMDPQLRMLLEVTYEAIVDGGINPASL-RGTSTGVWVGVSSSDASE-------ALSRDPETLVGYSMIGCQ 136 (2512)
T ss_dssp TTCCHHHHHTSCHHHHHHHHHHHHHHGGGTCCGGGG-TTCSCEEEEEECCCHHHH-------HTTSCTTTSCGGGGGGTS
T ss_pred cCCCHHHHHhcCHHHHHHHHHHHHHHHHCCCChhhc-CCCCeEEEEEeccHHHHH-------HHhcCccccCcceecccc
Confidence 568999999999999999999999999999998776 488999999998765432 223455678889999999
Q ss_pred hhHHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCC
Q 018323 81 INMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 160 (358)
Q Consensus 81 ~~~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~ 160 (358)
.++++++||+.|||+||+++|+++|+|++.||++|+++|++|+||++||||++.+++|..+..|...+.++ +++
T Consensus 137 ~~~~a~ris~~~~l~Gps~tv~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~~~ls------~~g 210 (2512)
T 2vz8_A 137 RAMMANRLSFFFDFKGPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLS------QDG 210 (2512)
T ss_dssp TTHHHHHHHHHHTCCSCEEEEECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHTTCBC------TTC
T ss_pred hhHHHHHHHHHhCCCCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccCCCCC------CCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998 779
Q ss_pred CCCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCC-CCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 018323 161 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH-ITQPHIDGKGAILAMTRALKQSGLQSHQ 239 (358)
Q Consensus 161 ~~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~-~~~~~~~~~~~~~~~~~al~~agl~~~d 239 (358)
.|+|||.+++||++|||++++||++.++|+ +||++|+|++.++||.+ .....|++.++.++|++||++||++|+|
T Consensus 211 ~c~~Fd~~adG~~~gEG~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~ 286 (2512)
T 2vz8_A 211 TCRSFDAEGTGYCRAEAVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPES 286 (2512)
T ss_dssp SCCSSSTTCCCBCBBCEEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTS
T ss_pred CCCCCCCCCCCcceeeeEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHH
Confidence 999999999999999999999999999885 59999999999999964 2233347899999999999999999999
Q ss_pred ccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Q 018323 240 VDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 319 (358)
Q Consensus 240 id~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~ 319 (358)
|+|||+|||||+.||++|..++.++|+... ..+++|+++|+++||+++|||++++|+++++|+++.|||++|+++|+|.
T Consensus 287 i~yveaHGTgT~~gD~~E~~al~~~f~~~~-~~~~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~~ipp~~~~~~~~p~ 365 (2512)
T 2vz8_A 287 LEYIEAHGTGTKVGDPQELNGIVNALCATR-REPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPE 365 (2512)
T ss_dssp CCEEECCCCCCTTHHHHHHHHHHHHHCSCS-SSCCEEECHHHHHCBCGGGHHHHHHHHHHHHHTTTBCCCCSSCCSCCTT
T ss_pred CCEEEeecCCCCCCCHHHHHHHHHHhcccC-CCCceeecccccccccccccchhHHHHHHHHHHCCCcCCCCCCCCCCcc
Confidence 999999999999999999999999998532 3578999999999999999999999999999999999999999999999
Q ss_pred CC-CCC----CccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 320 FN-DNF----MPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 320 ~~-~~~----~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
++ +.. ++ .+.++++.+++++|||||||+|+|+||++++
T Consensus 366 ~~~~~~~~~~~~-~~~~~~~~~~a~vnsfG~gG~Nah~il~~~~ 408 (2512)
T 2vz8_A 366 IPALQDGRLQVV-DRPLPIRGGNVGINSFGFGGSNVHVILQPNS 408 (2512)
T ss_dssp SSSSSSSSCEEC-CSCCBCCSCCEEEEEEETTTEEEEEEEEECC
T ss_pred ccccccCceEec-CCCccCCCCeEEEeccCCCCceeEEEEccCC
Confidence 86 431 22 3445566678999999999999999999863
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-59 Score=492.47 Aligned_cols=353 Identities=24% Similarity=0.273 Sum_probs=307.0
Q ss_pred CCccchhhccCCHHHHHHHHHHHHHHHHCCCC-CCC----CCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcc
Q 018323 1 MRTRGLILKSIARFIAYALCAADEALHDAKWL-PSD----QGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFF 75 (358)
Q Consensus 1 ~~~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~-~~~----~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 75 (358)
|.+|+++.++|||+++|+++++++||+|||++ +.+ + +..++|+++|++.+++..+...+...... ..++++.
T Consensus 1173 fgI~~~ea~~mDp~~~l~L~aa~eAL~~AGi~~p~e~~~~i-~~s~vGv~vGsg~gg~~~~~~~~~~~~~~--~~v~~~~ 1249 (1878)
T 2uv9_A 1173 YGVPEDIIQQVDPVTLYVLVSVAEALLSSGITDPYEFYKYV-HLSEVGNCIGSGVGGTSALRGMYKDRYLD--KPVQKDI 1249 (1878)
T ss_dssp HTCCHHHHHHSCHHHHHHHHHHHHHHHTTTCSSGGGHHHHS-CGGGEEEEEEESSCCHHHHHHHHTTTTTT--CCCCSCT
T ss_pred cCCCHHHHHhcCHHHHHHHHHHHHHHHHCCCCChhhhhccc-CccceEEEEccCCccHHHHHHHHHHHHhc--CCCCchh
Confidence 45889999999999999999999999999998 655 4 47899999999999988776665432222 2378888
Q ss_pred hhhhhhhHHHHHHHH-HcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccc-
Q 018323 76 IPRILINMASGHVSM-KYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTK- 153 (358)
Q Consensus 76 ~~~~~~~~~a~~ia~-~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~- 153 (358)
++.++.|.++++|++ .||++||+++++++|+|++.||+.|++.|++|+||++||||+|. +++.....|..++.++..
T Consensus 1250 ~~~~~~n~~aa~vs~~~lg~~GP~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~-~~~~~~~~f~~m~als~~~ 1328 (1878)
T 2uv9_A 1250 LQESFVNTMAAWVNMLLLSSTGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDD-FQEEGSYEFANMGATSNAK 1328 (1878)
T ss_dssp TGGGSHHHHHHHHHHHTCCCCCCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEEC-CCHHHHHHHHHHTCBCCHH
T ss_pred hhcchHHHHHHHHHHHhcCCCCCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhhccch
Confidence 999999999999999 59999999999999999999999999999999999999999998 678888888888888742
Q ss_pred ----cCCCCCCCCCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCC-h---------
Q 018323 154 ----YNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHID-G--------- 219 (358)
Q Consensus 154 ----~~~~~~~~~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~-~--------- 219 (358)
.+.+|++.||||+..++||++|||++++||++.+.|+++|.+||++|+|++.++|+.+...|.|. +
T Consensus 1329 de~a~g~~p~~~~RPfd~~r~Gfv~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~~t~ar~~~ 1408 (1878)
T 2uv9_A 1329 EEFARGREPGEMSRPTSTTRNGFMESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAPGQGVLTTAREKS 1408 (1878)
T ss_dssp HHHTTTCCTTSSCCSSBTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCSSCCCSCGGGGGCCCC
T ss_pred hhhhcCCCcccCcCCCccCCCCCcccceeEEEEEeeHHHHHHCCCceEEEEEEEEEecCCCccCCCCCCcchhhhhhhcc
Confidence 23457899999999999999999999999999999999999999999999999998765444331 0
Q ss_pred ---------------------------------------------------------HHHH-------------------
Q 018323 220 ---------------------------------------------------------KGAI------------------- 223 (358)
Q Consensus 220 ---------------------------------------------------------~~~~------------------- 223 (358)
..+.
T Consensus 1409 ~~~ps~~~~~~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~a~~~ 1488 (1878)
T 2uv9_A 1409 GNFPSPLLDIKYRRRQLELRRQQIKQWKESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEAQTS 1488 (1878)
T ss_dssp CSSCCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCcccchHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0122
Q ss_pred ------------HHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhccc--CCCCcceecccCCcCCcccc
Q 018323 224 ------------LAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHA--TSGSLAFSSTKGAIGHLLGA 289 (358)
Q Consensus 224 ------------~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~--~~~~~~v~~~k~~~Gh~~~a 289 (358)
+++++||+++|++++||||||+|||||+.||++|..++.++|+... .+.++++++.|+++||+.+|
T Consensus 1489 ~g~~~~~~~~~~~~ir~ALa~aGl~~~DId~veaHGTgT~~gD~~E~~al~~~f~~~~r~~~~pl~v~s~KsliGH~~gA 1568 (1878)
T 2uv9_A 1489 FGNEFWRRDSRIAPLRGALATWGLTIDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGA 1568 (1878)
T ss_dssp HHTSTTTTCTTSCHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCTTC
T ss_pred hcccccccChHHHHHHHHHHHcCCCHHHeeEEEEcCCCCcccCHHHHHHHHHHHhhcCCCCCCceeEEecccccCChHhH
Confidence 6899999999999999999999999999999999999999998632 24579999999999999999
Q ss_pred hhHHHHHHHHHHHHhCCCCCCCCCCCCCCCC-CCCCCcc-ccCCC-CCCcEEEeeccccccceeeeEeeec
Q 018323 290 AGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF-NDNFMPL-TASKD-MPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 290 sG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~-~~~~~~~-~~~~~-~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
+|++++++++++|++|.|||++|+++|+|.+ +++++.+ .+... ..++.+++|||||||+|+|+||+.+
T Consensus 1569 AGa~~li~~l~~L~~g~iPp~~n~d~~dp~i~~~~~v~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p 1639 (1878)
T 2uv9_A 1569 AGAWMLNGCLQVLNTGIVPGNRNADNVDKVMEQFDYIVYPSRSIKTDGIKAFSVTSFGFGQKGAQAIGVHP 1639 (1878)
T ss_dssp HHHHHHHHHHHHHTTCEECCCTTCCSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECT
T ss_pred hhHHHHHHHHHHHhcCCCCCCCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCeeEEEEEecC
Confidence 9999999999999999999999999999998 4666522 22222 3689999999999999999999875
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-58 Score=489.20 Aligned_cols=353 Identities=23% Similarity=0.284 Sum_probs=305.8
Q ss_pred CCccchhhccCCHHHHHHHHHHHHHHHHCCCC-CCC----CCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcc
Q 018323 1 MRTRGLILKSIARFIAYALCAADEALHDAKWL-PSD----QGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFF 75 (358)
Q Consensus 1 ~~~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~-~~~----~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 75 (358)
|.+|+++.++|||+++|+++++++||+|||++ +.+ + +..++||++|++.+++..+...+...... ..++++.
T Consensus 1198 fgI~~~ea~~mDp~~~l~L~aa~eAL~dAGi~dp~e~~~~i-~~s~vGv~vGs~~gg~~~~~~~~~~~~~~--~~v~~~~ 1274 (1887)
T 2uv8_A 1198 YGISDDIISQVDPITLFVLVSVVEAFIASGITDPYEMYKYV-HVSEVGNCSGSGMGGVSALRGMFKDRFKD--EPVQNDI 1274 (1887)
T ss_dssp TTCCHHHHHHSCHHHHHHHHHHHHHHHHTTCSSGGGHHHHS-CGGGEEECCEESSCCHHHHHHHHTTTTTT--CCCCTTH
T ss_pred cCCCHHHHHhcCHHHHHHHHHHHHHHHHcCCCChhhhhccc-CCceeEEEeccCCccHHHHHHHHHHHHhc--CCCCcch
Confidence 56889999999999999999999999999995 655 4 47899999999999988776665432222 3477888
Q ss_pred hhhhhhhHHHHHHHHH-cCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccc-
Q 018323 76 IPRILINMASGHVSMK-YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTK- 153 (358)
Q Consensus 76 ~~~~~~~~~a~~ia~~-lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~- 153 (358)
++.++.|.++++|++. ||++||+++++++|+|++.||+.|++.|++|+||++||||+|. +++..+..|..++.++..
T Consensus 1275 ~~~~~~n~~aa~is~~~lgl~GP~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~-~~~~~~~~f~~m~als~~~ 1353 (1887)
T 2uv8_A 1275 LQESFINTMSAWVNMLLISSSGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDD-FQEEGSFEFGNMKATSNTL 1353 (1887)
T ss_dssp HHHHSTTHHHHHHHHHTTCCCSCCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHTTCBCCHH
T ss_pred hhcchhhHHHHHHHHHHcCCccceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhhccch
Confidence 8999999999999995 9999999999999999999999999999999999999999998 578888888888888742
Q ss_pred ----cCCCCCCCCCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCC-----------
Q 018323 154 ----YNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHID----------- 218 (358)
Q Consensus 154 ----~~~~~~~~~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~----------- 218 (358)
.+.+|++.||||+..++||++|||++++||++.+.|+++|.+||++|+|++.++|+.+...|.+.
T Consensus 1354 ~e~~~g~~p~~~~RPfd~~r~Gfv~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~lt~ar~~~ 1433 (1887)
T 2uv8_A 1354 EEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHH 1433 (1887)
T ss_dssp HHHHTTCCGGGSCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCTTCCCSGGGGGGCCCC
T ss_pred hhhcccCCCccCcCCCcccCCCcccccceEEEEEccHHHHHHCCCceEEEEeeeEEecCCccccCCCCCccccccccccc
Confidence 13457789999999999999999999999999999999999999999999999998765433321
Q ss_pred -------h-------------------------------------------HHH--------------------------
Q 018323 219 -------G-------------------------------------------KGA-------------------------- 222 (358)
Q Consensus 219 -------~-------------------------------------------~~~-------------------------- 222 (358)
. ..+
T Consensus 1434 G~gt~ps~~ld~~~r~~ql~~~~~~i~~~~~~~~~~l~~~~~~~g~~~~~~~~Qe~~~~i~~~~~~~~~~~~~~~~~~~~ 1513 (1887)
T 2uv8_A 1434 SSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFY 1513 (1887)
T ss_dssp SCCSSCCGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTT
T ss_pred cccCCCCcccchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHhhccchh
Confidence 1 012
Q ss_pred -----HHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhccc--CCCCcceecccCCcCCcccchhHHHH
Q 018323 223 -----ILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHA--TSGSLAFSSTKGAIGHLLGAAGAVEA 295 (358)
Q Consensus 223 -----~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~--~~~~~~v~~~k~~~Gh~~~asG~~~l 295 (358)
.+++++||+++||+++||||||+|||||+.||.+|..++.++|+... .+.++++++.|+++||+.+|+|++++
T Consensus 1514 ~~d~~~~air~ALa~AGl~p~DId~veaHGTgT~~gD~~E~~Al~~~f~~~gr~~~~pl~v~s~KsliGH~~gAAGa~~l 1593 (1887)
T 2uv8_A 1514 KRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMM 1593 (1887)
T ss_dssp TTCSSSCHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCGGGHHHHHH
T ss_pred hchHHHHHHHHHHHHcCCCHHHceEEEecCCCCcccCHHHHHHHHHHHhhhccCCCCcEEEEecccceechHHHHhHHHH
Confidence 26899999999999999999999999999999999999999997532 23569999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCC-CCCCcc-ccCCC-CCCcEEEeeccccccceeeeEeeec
Q 018323 296 IFAVLAIHHGVAPLTLNLAKPDPIFN-DNFMPL-TASKD-MPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 296 ~~~~~~l~~~~ipp~~~~~~~~~~~~-~~~~~~-~~~~~-~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
++++++|++|.|||++|+++|+|.++ ++++.+ .+.+. ..++++++|||||||+|+|+||+++
T Consensus 1594 i~~ll~L~~g~iPpt~n~d~~dp~l~~~~~l~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p 1658 (1887)
T 2uv8_A 1594 NGALQILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHP 1658 (1887)
T ss_dssp HHHHHHHTTCEECCCTTCSSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECT
T ss_pred HHHHHHHHhCCcCCcCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCccEEEEEecC
Confidence 99999999999999999999999984 665421 23333 3689999999999999999999875
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-60 Score=487.33 Aligned_cols=354 Identities=23% Similarity=0.281 Sum_probs=303.1
Q ss_pred CCccchhhccCCHHHHHHHHHHHHHHHHCCCC-CCC----CCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcc
Q 018323 1 MRTRGLILKSIARFIAYALCAADEALHDAKWL-PSD----QGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFF 75 (358)
Q Consensus 1 ~~~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~-~~~----~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 75 (358)
|.+|+++.++|||+++|+++++++||+|||++ |.+ + +.+++||++|++.+++..+...+..... ...++++.
T Consensus 999 fGIs~~ea~~mDP~qrLaLeAa~EALedAGI~dP~ei~~~i-~~s~vGV~vGSg~Gg~~~l~~~~~~~~~--~~~v~~~~ 1075 (1688)
T 2pff_A 999 YGISDDIISQVDPITLFVLVSVVEAFIASGITDPYEMYKYV-HVSEVGNCSGSGMGGVSALRGMFKDRFK--DEPVQNDI 1075 (1688)
T ss_dssp SSCCTTTBTTBCSSTTHHHHHHHHHHTTTTCSSGGGGGGGT-CCSCSCCCCCCCSCCCSSHHHHHHSSSS--CCCCCSTT
T ss_pred CCCCHHHHhccCHHHHHHHHHHHHHHHHcCCCChHHhcccc-CCceEEEEecccCCCHHHHHHHHHHHHh--cCCCCcch
Confidence 45889999999999999999999999999997 655 4 4789999999999988766655542221 13477888
Q ss_pred hhhhhhhHHHHHHHH-HcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccc-
Q 018323 76 IPRILINMASGHVSM-KYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTK- 153 (358)
Q Consensus 76 ~~~~~~~~~a~~ia~-~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~- 153 (358)
++..+.|.++++|++ .||++||+++++++|+|++.||+.|++.|++|+||++||||+|.+ ++.....|..++.++..
T Consensus 1076 l~~~~~nt~Aa~Vs~~~LGl~GPs~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~m-sp~~~~~Fa~mgaLS~~~ 1154 (1688)
T 2pff_A 1076 LQESFINTMSAWVNMLLISSSGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDF-QEEGSFEFGNMKATSNTL 1154 (1688)
T ss_dssp HHHHCTHHHHHHHHHSSCCCCCCCCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCC-CTTTTTTTTTTSCSCCTT
T ss_pred hccccHHHHHHHHHHHHcCCcCCeEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccC-CHHHHHHHHhccccccCh
Confidence 899999999999999 799999999999999999999999999999999999999999984 66666677778877743
Q ss_pred ----cCCCCCCCCCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCC------------
Q 018323 154 ----YNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHI------------ 217 (358)
Q Consensus 154 ----~~~~~~~~~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~------------ 217 (358)
.+.+|++.||||+.+++|+++|||++++||++.+.|+++|.+||++|+|++.++|+.+.+.|.+
T Consensus 1155 ~e~a~G~~Pd~~cRPFd~~rdGfv~GEGAGavVLesle~Al~~G~~IyAvI~GsavnsDg~~~SipAPg~GiLt~Ar~~~ 1234 (1688)
T 2pff_A 1155 EEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHH 1234 (1688)
T ss_dssp TTTTSSCCSSSSCCSSSSSCCCCCCCSCCEEEEEECSHHHHSSSCCCCCEECCCCCCCCCCCSSSCCCCSSSSSSSSSCC
T ss_pred hhhhcCCChhhccCcCccCCCCCccccceEEEEeCcHHHHHHCCCceEEEEEEEEEECCCCccCCCCCCCCccchhhhcc
Confidence 1345788999999999999999999999999999999999999999999999999865432222
Q ss_pred --------C-----------------------------------------hHHH--------------------------
Q 018323 218 --------D-----------------------------------------GKGA-------------------------- 222 (358)
Q Consensus 218 --------~-----------------------------------------~~~~-------------------------- 222 (358)
. ...+
T Consensus 1235 G~~taPSp~ld~~~R~rql~~~~~~i~~~~~~e~~~l~~e~~~~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~Gn~f~ 1314 (1688)
T 2pff_A 1235 SSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFY 1314 (1688)
T ss_dssp CCSSCSSCCSCTTCCHHHHSHHHHHHHHHHHHHHHHHHHHSSSSCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTSSS
T ss_pred cccCCCCcccChHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhccCCcee
Confidence 1 0011
Q ss_pred -----HHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccC--CCCcceecccCCcCCcccchhHHHH
Q 018323 223 -----ILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHAT--SGSLAFSSTKGAIGHLLGAAGAVEA 295 (358)
Q Consensus 223 -----~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~--~~~~~v~~~k~~~Gh~~~asG~~~l 295 (358)
.+++++||+++|++++||||||+|||||+.+|++|..++.++|+.... +.++++++.|+++||+.+|||++++
T Consensus 1315 ~~d~~~~aIr~ALa~AGLtpdDIdyVEaHGTGT~lgD~iE~~AL~~af~~~gr~~g~pl~V~S~KsliGHp~GAAGa~~L 1394 (1688)
T 2pff_A 1315 KRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMM 1394 (1688)
T ss_dssp SSCTTCCSHHHHTTSSCSSTTCCCCCCCCCCSCSSSSTTTTTTTGGGTGGGCCCTTCCCCCCCCTTTTCCCSSTHHHHHH
T ss_pred cchHHHHHHHHHHHHcCCCHHHeeEEEEeCCCCccccHHHHHHHHHHHhhhCcCCCCeEEEEeChhhhcchHHHhhHHHH
Confidence 367899999999999999999999999999999999999999986332 3568999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCC-CCCCcc-ccCCCC-CCcEEEeeccccccceeeeEeeecC
Q 018323 296 IFAVLAIHHGVAPLTLNLAKPDPIFN-DNFMPL-TASKDM-PISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 296 ~~~~~~l~~~~ipp~~~~~~~~~~~~-~~~~~~-~~~~~~-~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
++++++|++|.|||++|+++|+|.++ ++.+.+ .+.+++ .++.+++|||||||+|+|+||++++
T Consensus 1395 ik~llaL~~G~IPptln~d~pdp~l~~~d~v~~p~~~~~~~~~r~AlVnSFGFGGtNAhvILe~p~ 1460 (1688)
T 2pff_A 1395 NGALQILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHPD 1460 (1688)
T ss_dssp HHHHHHSTTCCCCCCSCCSCCCTTCCSSCCCCSCTTCCSSSSSSCCCCCCCCSTTCCCCCCEECSS
T ss_pred HHHHHHHHcCCCCCCCCCCCCCCCCCcCCceeecCccccCCCCcEEEEeeECCCCeeEEEEEeCCC
Confidence 99999999999999999999999994 565521 333333 6899999999999999999999864
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-57 Score=497.45 Aligned_cols=354 Identities=22% Similarity=0.296 Sum_probs=306.0
Q ss_pred CCccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCC---CCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchh
Q 018323 1 MRTRGLILKSIARFIAYALCAADEALHDAKWLPSDQG---QKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIP 77 (358)
Q Consensus 1 ~~~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~---~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (358)
|.+++++.++|||+++|+++++++||+|||+++++++ +..++|||+|++.+++......+..+.. +....++ .++
T Consensus 2634 fgIs~rea~~mDp~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~-~~~~~~~-~~~ 2711 (3089)
T 3zen_D 2634 WGISPDMASSIDRVALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLL-GRAKPND-ILQ 2711 (3089)
T ss_dssp TTCCHHHHHHSCHHHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHT-TCCCCTT-HHH
T ss_pred cCCCHHHHHhcCHHHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhc-CCCccch-hhc
Confidence 5689999999999999999999999999999987662 4789999999999999888777765554 3333333 567
Q ss_pred hhhhhHHHHHHHHH-cCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhccccc----
Q 018323 78 RILINMASGHVSMK-YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTT---- 152 (358)
Q Consensus 78 ~~~~~~~a~~ia~~-lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~---- 152 (358)
..+.|..+++++.. ||++||+++|+++|+|++.||+.|+++|++|+||++||||+|. +++..+..|..++.++.
T Consensus 2712 ~~~~~~~aa~is~~~lGl~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~-ls~~~~~~f~~~~als~~~~~ 2790 (3089)
T 3zen_D 2712 EVLPNVVAAHVMQSYVGGYGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDD-LTLEAIIGFGDMAATADTEMM 2790 (3089)
T ss_dssp HTSTTHHHHHHHHHTTCCCSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHHTCBCCHHHH
T ss_pred cccccHHHHHHHHHHcCCCCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecc-cCHHHHHHHHHhhhhhcchhh
Confidence 78889999999975 5999999999999999999999999999999999999999999 78888888888887763
Q ss_pred -ccCCCCCCCCCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCCh-------HHHHH
Q 018323 153 -KYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDG-------KGAIL 224 (358)
Q Consensus 153 -~~~~~~~~~~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~-------~~~~~ 224 (358)
....+++..|+|||.+++|+++|||++++||++++.|+++|++||++|.+.+.++|+.+...+.+.. .++.+
T Consensus 2791 ~~~~~sp~~~crpFd~~~dG~v~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~Dg~~~~~~aP~~g~~~a~~~~q~~ 2870 (3089)
T 3zen_D 2791 RAKGISDSKFSRANDRRRLGFLEAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVHTSIPAPGLGALGAARGGRES 2870 (3089)
T ss_dssp HHTTCCTTTSCCSSBTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCCCCCSSCCCCGGGGGSTTGGGS
T ss_pred hhccCCcccccCccccCCCCEEEeccceEEEEeeHHHHHhCCCceEEEEEEEEEecCCcccCccCCchhHHhHhhhhHHH
Confidence 2245678999999999999999999999999999999999999999999999999998866665531 25667
Q ss_pred HHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHH---HHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHH
Q 018323 225 AMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEAT---AIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLA 301 (358)
Q Consensus 225 ~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~---a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~ 301 (358)
+++++|+++|++|+||||||+|||||+.||++|.. ++.++|+... +.++++++.|+++||+++|||++++++++++
T Consensus 2871 ai~~AL~~AGl~p~DIdyVEaHGTGT~lgD~~E~~al~al~~~fg~~~-~~~~~v~s~Ks~iGH~~gAAG~~~lik~ll~ 2949 (3089)
T 3zen_D 2871 TLARSLAQLGVGADDIAVISKHDTSTLANDPNETELHERIADSMGRAP-GNPLFIVSQKTLTGHAKGGAAVFQMMGLCQI 2949 (3089)
T ss_dssp HHHHHHHTTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHHHTTCCT-TCCEEEECSHHHHCBCSTTHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHeeEEEEecCCcccccHHHHHHHHHHHHHhCccC-CCcceecccccccCCchhhhhHHHHHHHHHH
Confidence 89999999999999999999999999999999999 6777787542 2468999999999999999999999999999
Q ss_pred HHhCCCCCCCCCCCCCCCCCC----CCCcc--ccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 302 IHHGVAPLTLNLAKPDPIFND----NFMPL--TASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 302 l~~~~ipp~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
|+++.|||++|+++|+|.++. .++.. .+++..+++++++|||||||+|+|+||++++
T Consensus 2950 L~~g~iPpt~~~~~~np~i~~~~~~~~~~~~~~w~~~~~~r~a~vnSfGfGG~NahvVle~~~ 3012 (3089)
T 3zen_D 2950 LRDGVIPPNRSLDCVDDELATSGHFVWVREPLDLRGKFPLKAGLVTSLGFGHVSGLVALVHPE 3012 (3089)
T ss_dssp HHHCCBCCCTTCSSBCGGGGGCSSEEECSSCBCCCTTSCCCEEEEEEEETTTEEEEEEEECGG
T ss_pred HhcCccCCCCCCCCCCCCccccCCeeecCCCccCCCCCCCCEEEEccccCCCCeEEEEEecCc
Confidence 999999999999999999872 11110 1123445899999999999999999999864
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-37 Score=292.42 Aligned_cols=271 Identities=23% Similarity=0.329 Sum_probs=216.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
..+|+++++++||+|||+++++++ ++++|+..+... .+.++.+|+..+|
T Consensus 30 ~~~L~~~a~~~Al~dAGl~~~~id-----~v~~g~~~~~~~--------------------------~~~~a~~ia~~lg 78 (397)
T 1wl4_A 30 VQDLGSTVIKEVLKRATVAPEDVS-----EVIFGHVLAAGC--------------------------GQNPVRQASVGAG 78 (397)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCTTS--------------------------CSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCCCC--------------------------CCHHHHHHHHHcC
Confidence 578999999999999999988887 899998654321 1346889999999
Q ss_pred C--CCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHH-H--------------H-----H----H--h
Q 018323 94 F--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS-M--------------A-----G----F--C 145 (358)
Q Consensus 94 l--~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~-~--------------~-----~----~--~ 145 (358)
+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.++..+. . . + + .
T Consensus 79 l~~~~p~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 158 (397)
T 1wl4_A 79 IPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNC 158 (397)
T ss_dssp CCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCC
T ss_pred CCCCccEEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccc
Confidence 9 7899999999999999999999999999999999999998653210 0 0 0 0 0
Q ss_pred hhccccc-------------------------------ccC----------------CCCCC------------CCCC-C
Q 018323 146 KSRALTT-------------------------------KYN----------------GTPQE------------ASRP-F 165 (358)
Q Consensus 146 ~~~~l~~-------------------------------~~~----------------~~~~~------------~~~p-f 165 (358)
.++.++. .+. .++++ .++| |
T Consensus 159 ~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf 238 (397)
T 1wl4_A 159 HMGITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEAMSKLKPYF 238 (397)
T ss_dssp BHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHTSCCSS
T ss_pred hHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCceeeccccccCCCCCHHHHhcCCCcc
Confidence 0111000 000 00111 4889 9
Q ss_pred cCCCCcee-------eecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 018323 166 DCGRDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSH 238 (358)
Q Consensus 166 ~~~~~g~~-------~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~ 238 (358)
+.+++|++ ++|||+++||++++.|+++|.+++++|+|++.+++ .|++...+...+++++|+++|++++
T Consensus 239 d~~~~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~ 313 (397)
T 1wl4_A 239 LTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGV-----EPSIMGIGPIPAIKQAVTKAGWSLE 313 (397)
T ss_dssp CCSSCCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGG
T ss_pred CCCCCCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeec-----ChhhccchHHHHHHHHHHHcCCCHH
Confidence 99999999 99999999999999999999999999999998873 3444556778999999999999999
Q ss_pred CccEEEecCCCCCCCcHHHHHH--HHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCC
Q 018323 239 QVDYVNAHATSTPLGDTVEATA--IRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKP 316 (358)
Q Consensus 239 did~i~~h~~gt~~~d~~E~~a--~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~ 316 (358)
|||+||+| |..|... +.+.|+... .++.+++.|.++||+.+|+|+.++++++++|+++
T Consensus 314 dId~ie~~-------d~f~~~~l~~~~~lg~~~--~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~----------- 373 (397)
T 1wl4_A 314 DVDIFEIN-------EAFAAVSAAIVKELGLNP--EKVNIEGGAIALGHPLGASGCRILVTLLHTLERM----------- 373 (397)
T ss_dssp GCCEEEEC-------CSBHHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH-----------
T ss_pred HCCEEEEe-------cccHHHHHHHHHHcCCCC--cCcCCCcCccccCCChhhhHHHHHHHHHHHHhhc-----------
Confidence 99999998 5556543 666776543 3577888899999999999999999999999883
Q ss_pred CCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 317 DPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
+.+++|++..+.||.+.++||++.
T Consensus 374 -----------------~~~~gl~~~~~ggG~~~a~~~e~~ 397 (397)
T 1wl4_A 374 -----------------GRSRGVAALCIGGGMGIAMCVQRE 397 (397)
T ss_dssp -----------------TCCEEEEEEEETTTEEEEEEEEEC
T ss_pred -----------------CCCEEEEEEecccchheEEEEEeC
Confidence 147899988888999999999873
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-37 Score=292.67 Aligned_cols=275 Identities=21% Similarity=0.245 Sum_probs=209.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
+..+|+++|+++||+|||+++++++ +|++|+..+++. ..+..+.+|+..+
T Consensus 25 ~~~~L~~~Aa~~Al~dAgl~~~~id-----~v~~g~~~~~~~-------------------------~~~~~a~~va~~l 74 (401)
T 1ulq_A 25 RPDDLLAHALSVLVDRSGVPKEEVE-----DVYAGCANQAGE-------------------------DNRNVARMALLLA 74 (401)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCSST-------------------------TTTTHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecccCCC-------------------------CCChHHHHHHHHh
Confidence 3567999999999999999998887 899998653321 0245788999999
Q ss_pred CC--CCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcC-hHH--------------H----------HHH-
Q 018323 93 GF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALS--------------M----------AGF- 144 (358)
Q Consensus 93 gl--~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~-~~~--------------~----------~~~- 144 (358)
|+ ++|+++++++|+|++.||..|+++|++|++|++||+|+|.++. |.. + .++
T Consensus 75 Gl~~~~p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 154 (401)
T 1ulq_A 75 GFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKM 154 (401)
T ss_dssp TCCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHH
T ss_pred CCCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhcccccccc
Confidence 99 6899999999999999999999999999999999999997654 210 0 001
Q ss_pred -hh-----hccc---------------------cc----------ccC----------------CCCCC-----------
Q 018323 145 -CK-----SRAL---------------------TT----------KYN----------------GTPQE----------- 160 (358)
Q Consensus 145 -~~-----~~~l---------------------~~----------~~~----------------~~~~~----------- 160 (358)
.. ++.. ++ .+. .++++
T Consensus 155 p~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~~~~~~d~~~r~~~t~e~~ 234 (401)
T 1ulq_A 155 QALYGTESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKL 234 (401)
T ss_dssp HHHSCCCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHH
T ss_pred ccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCceeeccccccCCCCCHHHH
Confidence 00 0000 00 000 00111
Q ss_pred -CCCC-CcCCCCcee-------eecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHH
Q 018323 161 -ASRP-FDCGRDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 231 (358)
Q Consensus 161 -~~~p-f~~~~~g~~-------~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 231 (358)
.++| |+. +|++ ++|||+++||++++.|+++|.+++++|+|++.+++. |+....+...+++++|+
T Consensus 235 ~~~rpif~~--~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~a~~~al~ 307 (401)
T 1ulq_A 235 AALRPVFRE--GGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVP-----PRIMGIGPVPATRKALE 307 (401)
T ss_dssp HHSCBSSST--TCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECC-----GGGGGGTHHHHHHHHHH
T ss_pred hhCCCccCC--CCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCC-----ccccchhHHHHHHHHHH
Confidence 2456 764 6777 799999999999999999999999999999998863 33334567899999999
Q ss_pred HcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCC
Q 018323 232 QSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTL 311 (358)
Q Consensus 232 ~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~ 311 (358)
++|++++|||+||+|.+.+. .|...++. |+......++.++..+..+||+.+|+|+.++++++++|+++
T Consensus 308 ~Agl~~~dId~ie~heafa~----~~l~~~~~-lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~------ 376 (401)
T 1ulq_A 308 RAGLSFSDLGLIELNEAFAA----QALAVLRE-WSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRR------ 376 (401)
T ss_dssp HTTCCGGGCSEEEECCSBHH----HHHHHHHH-HTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT------
T ss_pred HcCCCHHHcCEEEEecchHH----HHHHHHHH-cCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHHHHhhc------
Confidence 99999999999999966553 25555544 33211112344444555799999999999999999999985
Q ss_pred CCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 312 NLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
+.+++|++++++||.+.++||+++
T Consensus 377 ----------------------~~~~gl~~~~~ggG~~~a~v~~~~ 400 (401)
T 1ulq_A 377 ----------------------KVQFGLATMCIGVGQGIAVVVEGM 400 (401)
T ss_dssp ----------------------TCSEEEEEEEETTTEEEEEEEEEC
T ss_pred ----------------------CCCEEEEEeecCCcccEEEEEEeC
Confidence 247999999999999999999985
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=292.54 Aligned_cols=278 Identities=19% Similarity=0.274 Sum_probs=216.6
Q ss_pred CHHHHHHHHHHHHHHHHC-CCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHH
Q 018323 12 ARFIAYALCAADEALHDA-KWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM 90 (358)
Q Consensus 12 ~~~~~l~~~aa~~Al~dA-G~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 90 (358)
.+..+|+++++++||+|| |+++++++ ++++|+..+... ..+.++.+|++
T Consensus 28 ~~~~~L~~~a~~~AL~dA~gl~~~~id-----~v~~g~~~~~~~-------------------------~~~~~a~~ia~ 77 (390)
T 1wdk_C 28 TRAEDMSAHLISKVLERNSKVDPGEVE-----DVIWGCVNQTLE-------------------------QGWNIARMASL 77 (390)
T ss_dssp CCHHHHHHHHHHHHHHHCTTSCGGGEE-----EEEEECSSBSBT-------------------------TTTTHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHhccCCCHHHCC-----EEEEEeeccccC-------------------------CCCcHHHHHHH
Confidence 346899999999999999 99887776 899998653221 12467889999
Q ss_pred HcCC--CCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcC-hHHH------------------HHHhhhc-
Q 018323 91 KYGF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALSM------------------AGFCKSR- 148 (358)
Q Consensus 91 ~lgl--~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~-~~~~------------------~~~~~~~- 148 (358)
.||+ ++|+++++++|+|++.||..|+++|++|++|++||+|+|.++. |... ......+
T Consensus 78 ~lgl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ 157 (390)
T 1wdk_C 78 MTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKASGMMGLTAEML 157 (390)
T ss_dssp TSSSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTBCCCGGGGGTSCGGGGSHHHHHHHH
T ss_pred HcCCCCCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCcccccccCccccccCCcchhHHHHHHHHH
Confidence 9999 7899999999999999999999999999999999999997643 2110 0000000
Q ss_pred ----ccccc---------------------cCCC--C------CCCCCCCcCC---------------------CCcee-
Q 018323 149 ----ALTTK---------------------YNGT--P------QEASRPFDCG---------------------RDGFV- 173 (358)
Q Consensus 149 ----~l~~~---------------------~~~~--~------~~~~~pf~~~---------------------~~g~~- 173 (358)
.++.. +... | ...++|||.+ ++|++
T Consensus 158 ~~~~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~vt 237 (390)
T 1wdk_C 158 GKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVT 237 (390)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCC
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCCCcceeeccccccCCCCCHHHHhcCCCcccCCCCcEe
Confidence 01110 0000 1 1112688877 79999
Q ss_pred ------eecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecC
Q 018323 174 ------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHA 247 (358)
Q Consensus 174 ------~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~ 247 (358)
++||++++||++++.|+++|.+++++|+|++.+++ .|++...+...+++++|+++|++|+||||||+|.
T Consensus 238 ~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d 312 (390)
T 1wdk_C 238 AGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGV-----DPAIMGYGPVPATQKALKRAGLNMADIDFIELNE 312 (390)
T ss_dssp GGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECC
T ss_pred chhcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEecc-----ChhhcchhHHHHHHHHHHHcCCChhhCcEEEecc
Confidence 99999999999999999999999999999998874 3444456678999999999999999999999997
Q ss_pred CCCCCCcHHHHHHHHHHhhcccC-CCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCc
Q 018323 248 TSTPLGDTVEATAIRTVFSDHAT-SGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMP 326 (358)
Q Consensus 248 ~gt~~~d~~E~~a~~~~~~~~~~-~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~ 326 (358)
+++. |..++.+.|+.... ..++.+++.|.++||+++|+|+.++++++++|+++
T Consensus 313 ~f~~-----~~~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~--------------------- 366 (390)
T 1wdk_C 313 AFAA-----QALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQN--------------------- 366 (390)
T ss_dssp SBHH-----HHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT---------------------
T ss_pred CCHH-----HHHHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhc---------------------
Confidence 7654 56666777764310 12466777888999999999999999999999984
Q ss_pred cccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 327 LTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 327 ~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
+.++++++..+.||.+.++||++.
T Consensus 367 -------~~~~gl~~~~~ggG~~~a~~~~~~ 390 (390)
T 1wdk_C 367 -------GGTFGLSTMCIGLGQGIATVFERV 390 (390)
T ss_dssp -------TCSEEEEEEEETTTEEEEEEEECC
T ss_pred -------CCCEEEEEecccchheEEEEEEeC
Confidence 136788888888999999999873
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=287.04 Aligned_cols=272 Identities=19% Similarity=0.271 Sum_probs=212.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
+..+|+++++++||+|||+++++++ ++++|+..+... .+.++.+|++.+
T Consensus 26 ~~~~L~~~a~~~Al~dAgl~~~~id-----~~~~g~~~~~~~--------------------------~~~~a~~ia~~l 74 (392)
T 2vu1_A 26 PAHELGATVISAVLERAGVAAGEVN-----EVILGQVLPAGE--------------------------GQNPARQAAMKA 74 (392)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCTTS--------------------------CSCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCCCC--------------------------CcHHHHHHHHHc
Confidence 4678999999999999999988887 888887653210 134678999999
Q ss_pred CCC--CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHH----H--------HHh-------------
Q 018323 93 GFQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM----A--------GFC------------- 145 (358)
Q Consensus 93 gl~--gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~----~--------~~~------------- 145 (358)
|++ +|+++++++|+|++.||..|++.|++|++|++||+|+|.++..+.. . .+.
T Consensus 75 gl~~~~p~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (392)
T 2vu1_A 75 GVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYG 154 (392)
T ss_dssp TCCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTC
T ss_pred CCCCCceEEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhccccccccc
Confidence 999 8999999999999999999999999999999999999976431110 0 000
Q ss_pred -hhcccc----cccCCC-----------------------------CC-----CCCCCCcCC------------------
Q 018323 146 -KSRALT----TKYNGT-----------------------------PQ-----EASRPFDCG------------------ 168 (358)
Q Consensus 146 -~~~~l~----~~~~~~-----------------------------~~-----~~~~pf~~~------------------ 168 (358)
.++.++ ..++.+ |. ..++|||.+
T Consensus 155 ~~~~~~a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~f~~d~~~r~~~t~e~~~~~~~v 234 (392)
T 2vu1_A 155 YHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPA 234 (392)
T ss_dssp CBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCCEEECSCSSCCTTCCHHHHHTCCCS
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCCCceeeccccccCCCCCHHHHhcCCCc
Confidence 011110 000000 00 125788876
Q ss_pred --CCcee-------eecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 018323 169 --RDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQ 239 (358)
Q Consensus 169 --~~g~~-------~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~d 239 (358)
++|++ ++|||+++||++++.|+++|.+++++|+|++.+++ .|++...+...+++++|+++|++++|
T Consensus 235 ~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~agl~~~d 309 (392)
T 2vu1_A 235 FDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGV-----DPKVMGTGPIPASRKALERAGWKIGD 309 (392)
T ss_dssp SCTTCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGG
T ss_pred cCCCCCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeec-----ChhhcchhHHHHHHHHHHHcCCCHHH
Confidence 77999 99999999999999999999999999999998874 34444567789999999999999999
Q ss_pred ccEEEecCCCCCCCcHHHHHH--HHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCC
Q 018323 240 VDYVNAHATSTPLGDTVEATA--IRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPD 317 (358)
Q Consensus 240 id~i~~h~~gt~~~d~~E~~a--~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~ 317 (358)
||+||+| |..|..+ +.+.|+... .++.+++.|.++||+++|+|+.++++++++|+++
T Consensus 310 Id~ie~~-------d~f~~~~l~~~~~lg~~~--~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~------------ 368 (392)
T 2vu1_A 310 LDLVEAN-------EAFAAQACAVNKDLGWDP--SIVNVNGGAIAIGHPIGASGARILNTLLFEMKRR------------ 368 (392)
T ss_dssp CSEEEEC-------CSBHHHHHHHHHHHCCCG--GGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHH------------
T ss_pred cCEEEec-------cccHHHHHHHHHHcCCCc--ccCCCCccHhhhCCChhhHHHHHHHHHHHHHhcc------------
Confidence 9999999 6667666 355665432 3577788888999999999999999999999873
Q ss_pred CCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 318 PIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
..+++|++...-||.+.++||++.
T Consensus 369 ----------------~~~~gl~~~~~ggG~~~a~~~e~~ 392 (392)
T 2vu1_A 369 ----------------GARKGLATLCIGGGMGVAMCIESL 392 (392)
T ss_dssp ----------------TCSEEEEEEEETTTEEEEEEEECC
T ss_pred ----------------CCCEEEEEEecccchheEEEEEeC
Confidence 136788877666899999999873
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=282.87 Aligned_cols=273 Identities=19% Similarity=0.281 Sum_probs=210.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
+..+|+++|+++||+|||+++++++ +|++|+..++.. ..+.++.+|+..|
T Consensus 54 ~~~~La~~Aa~~AL~dAGl~~~~Id-----~vi~g~~~~~~~-------------------------~~~~~a~~va~~l 103 (442)
T 2wu9_A 54 YPDDLLAPVLRALIEKTNLNPSEVG-----DIVVGTVLAPGS-------------------------QRASECRMAAFYA 103 (442)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCC-----CEEEECCSSBHH-------------------------HHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeecCccC-------------------------CCChHHHHHHHHc
Confidence 3578999999999999999998887 799998753321 1245688999999
Q ss_pred CC--CCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHH--------------H-------HHH-----
Q 018323 93 GF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS--------------M-------AGF----- 144 (358)
Q Consensus 93 gl--~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~--------------~-------~~~----- 144 (358)
|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.++..+. + ...
T Consensus 104 Gl~~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~mg~~A~~~ 183 (442)
T 2wu9_A 104 GFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENV 183 (442)
T ss_dssp TCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTSCHHHHHHHH
T ss_pred CCCCCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchhHHHHHHHHH
Confidence 99 7899999999999999999999999999999999999997654210 0 000
Q ss_pred -----------------hh--------hccccccc------------------CCCCCC------------CCCC-CcCC
Q 018323 145 -----------------CK--------SRALTTKY------------------NGTPQE------------ASRP-FDCG 168 (358)
Q Consensus 145 -----------------~~--------~~~l~~~~------------------~~~~~~------------~~~p-f~~~ 168 (358)
.. .+.+.... ..+.++ .++| |+.
T Consensus 184 ~~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~rpvfd~- 262 (442)
T 2wu9_A 184 AQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKK- 262 (442)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTSCCSSCT-
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcCCCccCC-
Confidence 00 00110000 000111 3456 764
Q ss_pred CCcee-------eecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcc
Q 018323 169 RDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVD 241 (358)
Q Consensus 169 ~~g~~-------~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did 241 (358)
+|++ ++|||+++||++++.|+++|.+|+++|+|++.+++ .|+....+...+++++|+++|++++|||
T Consensus 263 -~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~A~~~Al~~AGl~~~DId 336 (442)
T 2wu9_A 263 -DGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGV-----DPAIMGIGPAVAIPAAVKAAGLELDDID 336 (442)
T ss_dssp -TCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEEC-----CGGGGGGHHHHHHHHHHHHTTCCGGGCC
T ss_pred -CCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecC-----CchhcchHHHHHHHHHHHHcCCCHHHCC
Confidence 6777 69999999999999999999999999999999876 3444456778999999999999999999
Q ss_pred EEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Q 018323 242 YVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 319 (358)
Q Consensus 242 ~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~ 319 (358)
+||+|+++|.. |..+++. |+... -+++..++ .+||+++|+|+.++++++++|+++. |
T Consensus 337 ~iE~h~aft~~----~l~~~~~-lG~~~----~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~Lr~~~-~----------- 395 (442)
T 2wu9_A 337 LFEINEAFASQ----FVYCRNK-LGLDP----EKINVNGGAMAIGHPLGATGARCVATLLHEMKRRG-K----------- 395 (442)
T ss_dssp EEEECCSBHHH----HHHHHHH-HTCCG----GGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHC-T-----------
T ss_pred EEEEeCCChHH----HHHHHHH-hCCCC----CCcCCCccHhhcCCchhHHHHHHHHHHHHHHhccC-C-----------
Confidence 99999998864 7777754 44321 24554444 7999999999999999999999853 0
Q ss_pred CCCCCCccccCCCCCCcEEEe-eccccccceeeeEeeecC
Q 018323 320 FNDNFMPLTASKDMPISAALS-NSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~l~-~~~g~gG~~~~~il~~~~ 358 (358)
+.+++|+ +++| ||.++++||++++
T Consensus 396 --------------~~~~glas~~~G-GG~~~a~v~~~~~ 420 (442)
T 2wu9_A 396 --------------DCRFGVVSMCIG-TGMGAAAVFERGD 420 (442)
T ss_dssp --------------TCCEEEEEEEET-TTEEEEEEEEECS
T ss_pred --------------CCCEEEEEeecc-cchheEEEEEecc
Confidence 2478885 5677 9999999999864
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-35 Score=278.66 Aligned_cols=272 Identities=20% Similarity=0.252 Sum_probs=215.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
+..+|+++|+++||+|||+++++++ +|++|+..++.. .+..+..++..+
T Consensus 54 ~~~~L~~~Aa~~AL~dAgl~~~~id-----~v~~g~~~~~~~--------------------------~~~~a~~~a~~l 102 (418)
T 2iik_A 54 TPDELLSAVMTAVLKDVNLRPEQLG-----DICVGNVLQPGA--------------------------GAIMARIAQFLS 102 (418)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCC-----CEEEECSSSBGG--------------------------GHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCccc--------------------------cccHHHHHHHHc
Confidence 4688999999999999999998887 899998653221 134566788899
Q ss_pred CC--CCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHH---------------------HHH---hh
Q 018323 93 GF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM---------------------AGF---CK 146 (358)
Q Consensus 93 gl--~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~---------------------~~~---~~ 146 (358)
|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.++..+.. ..+ ..
T Consensus 103 Gl~~~~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ 182 (418)
T 2iik_A 103 DIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSENV 182 (418)
T ss_dssp TCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGSCHHHHHHHH
T ss_pred CCCCCceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCcccchhhhcccccccccccHHHHHHHH
Confidence 99 68999999999999999999999999999999999999986542100 000 00
Q ss_pred ---------------------------hccccccc-----------------CCCCCCCCCC-------------CcCCC
Q 018323 147 ---------------------------SRALTTKY-----------------NGTPQEASRP-------------FDCGR 169 (358)
Q Consensus 147 ---------------------------~~~l~~~~-----------------~~~~~~~~~p-------------f~~~~ 169 (358)
.+.+.... ..++++.+|| |+.++
T Consensus 183 a~~~gitre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~ 262 (418)
T 2iik_A 183 AERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDG 262 (418)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTTC
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHhChhcCccccceeeeeeccccccCcccceeeecccCcCCCCCHHHHhhCCCcccCCC
Confidence 00100000 0123567888 98765
Q ss_pred -----CceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEE
Q 018323 170 -----DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVN 244 (358)
Q Consensus 170 -----~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~ 244 (358)
+++.++|||+++||++++.|+++|.+|+++|.|++.+.. .|+..+.+...+++++|+++|++++|||+||
T Consensus 263 ~~t~~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~dId~vE 337 (418)
T 2iik_A 263 STTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGV-----PPDIMGIGPAYAIPVALQKAGLTVSDVDIFE 337 (418)
T ss_dssp CCCSTTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEEC-----CGGGGGGHHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred ceeeccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEEeccC-----CchhcchhHHHHHHHHHHHcCCCHHHCCeee
Confidence 999999999999999999999999999999999988763 3444456778899999999999999999999
Q ss_pred ecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 018323 245 AHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFND 322 (358)
Q Consensus 245 ~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~ 322 (358)
+|++ +...|.+|.+++. .. +.+++..++ ++||+.+|+|+.++++++++|+++-
T Consensus 338 ~h~a-f~~~~~~~~~~lg----~~----~~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~~~---------------- 392 (418)
T 2iik_A 338 INEA-FASQAAYCVEKLR----LP----PEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRG---------------- 392 (418)
T ss_dssp ECCS-BHHHHHHHHHHHT----CC----GGGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHT----------------
T ss_pred eecc-chHHHHHHHHHcC----CC----ccccCCCCCeeeecCChhhhHHHHHHHHHHHHHhcC----------------
Confidence 9975 4456777766553 11 257888886 7999999999999999999998721
Q ss_pred CCCccccCCCCCCc-EEEeeccccccceeeeEeeec
Q 018323 323 NFMPLTASKDMPIS-AALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 323 ~~~~~~~~~~~~~~-~~l~~~~g~gG~~~~~il~~~ 357 (358)
.+ +++++.++.||...++||+++
T Consensus 393 ------------~~~~gl~~~c~ggG~g~a~~~e~~ 416 (418)
T 2iik_A 393 ------------KRAYGVVSMCIGTGMGAAAVFEYP 416 (418)
T ss_dssp ------------SCEEEEEEEEETTTEEEEEEEEEC
T ss_pred ------------CCeeeEEEEeeccchhheEEEecc
Confidence 24 788899999999999999985
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-35 Score=274.76 Aligned_cols=269 Identities=19% Similarity=0.222 Sum_probs=203.3
Q ss_pred HHHHHHHHHHHHHHHHCC----CCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHH
Q 018323 13 RFIAYALCAADEALHDAK----WLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHV 88 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG----~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i 88 (358)
+..+|+++|+++||+||| +++++++ +|++|+..++. ..+.++.+|
T Consensus 34 ~~~~La~~Aa~~Al~~Ag~~~~l~~~~id-----~v~~g~~~~~~--------------------------~~~~~a~~v 82 (393)
T 1afw_A 34 NTDYLLYNFLNEFIGRFPEPLRADLNLIE-----EVACGNVLNVG--------------------------AGATEHRAA 82 (393)
T ss_dssp CHHHHHHHHHHHHHHTSCHHHHTCGGGCC-----CEEEECSSSBG--------------------------GGHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCHHHCC-----EEEEEecCCCC--------------------------CCChHHHHH
Confidence 357799999999999999 9988887 79999865321 235678899
Q ss_pred HHHcCC--CCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHH------------HH--HH-----hhh
Q 018323 89 SMKYGF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS------------MA--GF-----CKS 147 (358)
Q Consensus 89 a~~lgl--~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~------------~~--~~-----~~~ 147 (358)
+..+|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.++..+. +. .+ ..+
T Consensus 83 a~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~ 162 (393)
T 1afw_A 83 CLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPM 162 (393)
T ss_dssp HHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCH
T ss_pred HHHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhH
Confidence 999999 7899999999999999999999999999999999999997543211 00 00 000
Q ss_pred cccc----cccC----------------------------------------CCCCCC------------CCC-CcCCCC
Q 018323 148 RALT----TKYN----------------------------------------GTPQEA------------SRP-FDCGRD 170 (358)
Q Consensus 148 ~~l~----~~~~----------------------------------------~~~~~~------------~~p-f~~~~~ 170 (358)
+.+. ..++ .++++. ++| ||.++
T Consensus 163 ~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf~~~~- 241 (393)
T 1afw_A 163 GITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGSICQSDEGPRPNVTAESLSSIRPAFIKDR- 241 (393)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTTSCEECSCSSCCSCCCHHHHHHCCBSCC----
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccCCceeccccccCCCCCHHHHhcCCCcccCCC-
Confidence 1000 0000 012222 456 87544
Q ss_pred cee-------eecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEE
Q 018323 171 GFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYV 243 (358)
Q Consensus 171 g~~-------~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i 243 (358)
|++ ++||++++||++++.|+++|.+++++|+|++.+++. |+....+...+++++|+++|++++|||+|
T Consensus 242 G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~a~~~al~~Agl~~~dId~v 316 (393)
T 1afw_A 242 GTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVP-----PEIMGVGPAYAIPKVLEATGLQVQDIDIF 316 (393)
T ss_dssp CCCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECC-----GGGGGGHHHHHHHHHHHHHTCCGGGCSEE
T ss_pred CCeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEeccC-----hhhcchhHHHHHHHHHHHcCCCHHHCCEE
Confidence 666 899999999999999999999999999999998862 34445677899999999999999999999
Q ss_pred EecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCC
Q 018323 244 NAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFN 321 (358)
Q Consensus 244 ~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~ 321 (358)
|+|++++.. |...++. |+... .+++..++ .+||+++|+|+.++++++++|+++-
T Consensus 317 e~h~~ft~~----~l~~~~~-lg~~~----~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~--------------- 372 (393)
T 1afw_A 317 EINEAFAAQ----ALYCIHK-LGIDL----NKVNPRGGAIALGHPLGCTGARQVATILRELKKDQ--------------- 372 (393)
T ss_dssp EECCSBHHH----HHHHHHH-HTCCG----GGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTTC---------------
T ss_pred EEeccCHHH----HHHHHHH-hCCCC----cCcCCCCChhhcCCchhhHHHHHHHHHHHHHhhcC---------------
Confidence 999988753 6666654 44321 34554444 7999999999999999999997631
Q ss_pred CCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 322 DNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 322 ~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
. .++...+-||...++||+++
T Consensus 373 -----------~----gl~~~c~ggg~g~a~~~~~~ 393 (393)
T 1afw_A 373 -----------I----GVVSMCIGTGMGAAAIFIKE 393 (393)
T ss_dssp -----------E----EEEEEEETTTEEEEEEEEEC
T ss_pred -----------C----cEEEEeecccceEEEEEEeC
Confidence 1 56666666788888999874
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-35 Score=274.95 Aligned_cols=268 Identities=19% Similarity=0.274 Sum_probs=205.2
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
+..+|+++++++||+|||+++++++ ++++|+..+.. ..+..+.+++..+
T Consensus 31 ~~~~l~~~a~~~Al~dAgl~~~~id-----~~~~g~~~~~~--------------------------~~~~~a~~va~~l 79 (395)
T 2ib8_A 31 PATKLGSIAIQGAIEKAGIPKEEVK-----EAYMGNVLQGG--------------------------EGQAPTRQAVLGA 79 (395)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCTT--------------------------SCSCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCCC--------------------------CCchHHHHHHHHc
Confidence 4578999999999999999988887 78888765321 1134678999999
Q ss_pred CC--CCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHH-------------------HHHH-------
Q 018323 93 GF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS-------------------MAGF------- 144 (358)
Q Consensus 93 gl--~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~-------------------~~~~------- 144 (358)
|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.++.... +..+
T Consensus 80 gl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (395)
T 2ib8_A 80 GLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKI 159 (395)
T ss_dssp TCCTTCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTTE
T ss_pred CCCCCceEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccccccccccccccccccccccccccccc
Confidence 99 7899999999999999999999999999999999999997543211 0000
Q ss_pred ----------hhhcccccc---------------------cC-----------------CCCCCCCCC--CcC-------
Q 018323 145 ----------CKSRALTTK---------------------YN-----------------GTPQEASRP--FDC------- 167 (358)
Q Consensus 145 ----------~~~~~l~~~---------------------~~-----------------~~~~~~~~p--f~~------- 167 (358)
...+ ++.. +. .+.++.+++ |+.
T Consensus 160 ~m~~~a~~~~~~~g-~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~~~p~~~~~~D~~~r~~~~~~l~~l~~~ 238 (395)
T 2ib8_A 160 HMGSCAENTAKKLN-IARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVKEDEEYKRVDFSKVPKLKTV 238 (395)
T ss_dssp EHHHHHHHHHHHHT-CCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCTTSCCEEECSCSGGGSCCTTTGGGSCCT
T ss_pred hHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHhcccccCcccceeeeeecccCCcceeeccccccccCCHHHHhcCCcc
Confidence 0000 0000 00 001122222 554
Q ss_pred --CCCcee-------eecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 018323 168 --GRDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSH 238 (358)
Q Consensus 168 --~~~g~~-------~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~ 238 (358)
+++|++ ++||++++||++++.|+++|.+++++|+|++.+. +.|.....++..+++++|+++|++++
T Consensus 239 f~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~-----~~p~~~~~~~~~a~~~al~~Agl~~~ 313 (395)
T 2ib8_A 239 FQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAA-----VEPIDFPIAPVYAASMVLKDVGLKKE 313 (395)
T ss_dssp TCSSSCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEE-----CCGGGGGGHHHHHHHHHHHHHTCCGG
T ss_pred ccCCCCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEec-----cChhhccccHHHHHHHHHHHcCCCHH
Confidence 558999 9999999999999999999999999999999765 23433456788999999999999999
Q ss_pred CccEEEecCCCCCCCcHHHHHHHHHH--hhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCC
Q 018323 239 QVDYVNAHATSTPLGDTVEATAIRTV--FSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKP 316 (358)
Q Consensus 239 did~i~~h~~gt~~~d~~E~~a~~~~--~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~ 316 (358)
|||+||+| |..|..++..+ |+... .++.+++.|.++||+.+|+|+.++++++++|+++
T Consensus 314 dId~ie~~-------D~f~~~~l~~~e~lg~~~--~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~----------- 373 (395)
T 2ib8_A 314 DIAMWEVN-------EAFSLVVLANIKMLEIDP--QKVNINGGAVSLGHPIGMSGARIVGHLTHALKQG----------- 373 (395)
T ss_dssp GEEEEEEC-------CSBHHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSCTT-----------
T ss_pred HcCEEEEc-------cccHHHHHHHHHHcCCCc--cccCCCcchhhcCCChhHHHHHHHHHHHHHHhhC-----------
Confidence 99999988 77788888777 65432 3567778888999999999999999999998641
Q ss_pred CCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 317 DPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
++.++....-||...++||++
T Consensus 374 -------------------~~gl~~~~~ggG~g~a~~~~~ 394 (395)
T 2ib8_A 374 -------------------EYGLASICNGGGGASAMLIQK 394 (395)
T ss_dssp -------------------CEEEEEEEETTTEEEEEEEEE
T ss_pred -------------------CceEEEEecccCHhheEEEEc
Confidence 345555555567777899886
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=271.55 Aligned_cols=273 Identities=22% Similarity=0.352 Sum_probs=214.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
+...|+++|+++||+|+|+++++++ ++++++..+.. ..+..+.+++..+
T Consensus 30 ~~~~L~~~A~~~AL~~agl~~~dId-----~vi~g~~~~~~--------------------------~~~~~a~~v~~~l 78 (396)
T 4dd5_A 30 SAVELGVTAAKEAIKRANITPDMID-----ESLLGGVLTAG--------------------------LGQNIARQIALGA 78 (396)
T ss_dssp CHHHHHHHHHHHHHHHTTCCGGGCC-----EEEEECSCCTT--------------------------SCSCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeecCCC--------------------------CCchHHHHHHHHc
Confidence 4678999999999999999999998 99999865321 1234678999999
Q ss_pred CCC--CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHH---------------------H------
Q 018323 93 GFQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA---------------------G------ 143 (358)
Q Consensus 93 gl~--gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~---------------------~------ 143 (358)
|++ +|+++|+.+|+|++.||..|+++|++|++|++||+|+|.++..+... .
T Consensus 79 Gl~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (396)
T 4dd5_A 79 GIPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFN 158 (396)
T ss_dssp TCCTTSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTT
T ss_pred CCCCCceEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccc
Confidence 994 79999999999999999999999999999999999999876522100 0
Q ss_pred ------------------------H---hhh--------cccccc------------cCCCCCCCCCC------------
Q 018323 144 ------------------------F---CKS--------RALTTK------------YNGTPQEASRP------------ 164 (358)
Q Consensus 144 ------------------------~---~~~--------~~l~~~------------~~~~~~~~~~p------------ 164 (358)
+ ... +.+... ...++++..|+
T Consensus 159 ~~~~~~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~~ 238 (396)
T 4dd5_A 159 NYHMGITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTTMEKLAKLRP 238 (396)
T ss_dssp TEEHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----CEEECSCSCCCTTCCHHHHHHCCB
T ss_pred cchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCCceeecCcccccCCCCHHHHhhCCC
Confidence 0 000 000000 00012233332
Q ss_pred -Cc-----CCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 018323 165 -FD-----CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSH 238 (358)
Q Consensus 165 -f~-----~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~ 238 (358)
|+ ...++..++||++++||++++.|++++.+++++|+|++.+++ .|++...++..+++++|+++|++|+
T Consensus 239 v~~p~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~ 313 (396)
T 4dd5_A 239 AFKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGV-----DPKIMGYGPVPATKKALEAANMTIE 313 (396)
T ss_dssp SSSTTCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGG
T ss_pred ccCCCCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecC-----CCCcccHHHHHHHHHHHHHcCCCHH
Confidence 33 224566789999999999999999999999999999998875 3444556788999999999999999
Q ss_pred CccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCC
Q 018323 239 QVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDP 318 (358)
Q Consensus 239 did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~ 318 (358)
|||+||+|.+. .+|..++.+.|+... .++++++.|.++||+.+|+|+.++++++++|+++
T Consensus 314 dId~ve~~d~f-----~~~~~~~~~~lg~~~--~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~~------------- 373 (396)
T 4dd5_A 314 DIDLVEANEAF-----AAQSVAVIRDLNIDM--NKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRR------------- 373 (396)
T ss_dssp GCSEEEECCSB-----HHHHHHHHHHHTCCT--TSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH-------------
T ss_pred HcCEEEecChH-----HHHHHHHHHHhCCCC--CccCCCCchhhccCcHHHHHHHHHHHHHHHHHhc-------------
Confidence 99999999543 257777777777543 4678889999999999999999999999999873
Q ss_pred CCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 319 IFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
+.+++|++.++.||...++||++
T Consensus 374 ---------------~~~~gl~~~c~ggG~g~a~~~e~ 396 (396)
T 4dd5_A 374 ---------------DAKTGLATLCIGGGMGTTLIVKR 396 (396)
T ss_dssp ---------------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred ---------------CCCeEEEEEcccCCceeEEEEeC
Confidence 24789999999999999999985
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=271.76 Aligned_cols=274 Identities=21% Similarity=0.295 Sum_probs=215.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
+..+|+++|+++||+|+|++++++| ++++|+..... .....+.+++..+
T Consensus 28 ~~~~L~~~A~~~Al~~agl~~~~Id-----~v~~g~~~~~~--------------------------~~~~~a~~i~~~l 76 (394)
T 3ss6_A 28 TPVELAVPVLQEAVKRGGVEPHEVD-----EVILGHCIQRT--------------------------DEANTARTAALAA 76 (394)
T ss_dssp CHHHHHHHHHHHHHHHTTCCGGGCC-----EEEEECSSCCG--------------------------GGCSHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHcCCCHhHCC-----EEEEEEccCCC--------------------------ccchHHHHHHHHc
Confidence 4678999999999999999999998 89999865321 1234677899999
Q ss_pred CC--CCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHH----------------------------
Q 018323 93 GF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA---------------------------- 142 (358)
Q Consensus 93 gl--~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~---------------------------- 142 (358)
|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.++..+...
T Consensus 77 Gl~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (394)
T 3ss6_A 77 GFPDTVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHH 156 (394)
T ss_dssp TCCTTCEEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBCTTTC
T ss_pred CCCCCceEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCccccccccccccccccc
Confidence 99 479999999999999999999999999999999999999866422100
Q ss_pred ---HH----------------------hhhc--------cccc---------c---cCCCCCCCCCC-------------
Q 018323 143 ---GF----------------------CKSR--------ALTT---------K---YNGTPQEASRP------------- 164 (358)
Q Consensus 143 ---~~----------------------~~~~--------~l~~---------~---~~~~~~~~~~p------------- 164 (358)
+. .... .+.. + ...++++.+|+
T Consensus 157 ~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~d~~~R~~~t~e~~~~~~pv 236 (394)
T 3ss6_A 157 IMMGETAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADITAEKLAGLKPA 236 (394)
T ss_dssp CBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCEEEECSCCCCCTTCCHHHHHTCCBS
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCceeecccccccCCCCHHHHhhCCCc
Confidence 00 0000 0000 0 00123444443
Q ss_pred CcC-----CCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 018323 165 FDC-----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQ 239 (358)
Q Consensus 165 f~~-----~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~d 239 (358)
|+. ..++..++||++++||++++.|++++.+++++|+|++.++. .|.....++..+++++|+++|++|+|
T Consensus 237 f~~~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~a~~~al~~agl~~~d 311 (394)
T 3ss6_A 237 FRKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGV-----DPKIMGIGPAPAIRKGLEKVDWSLED 311 (394)
T ss_dssp SSTTCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGG
T ss_pred cCCCCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecC-----CCccchHHHHHHHHHHHHHcCCCHHH
Confidence 543 25667789999999999999999999999999999998763 34444556789999999999999999
Q ss_pred ccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Q 018323 240 VDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 319 (358)
Q Consensus 240 id~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~ 319 (358)
||+||+|... .+|..++.+.|+... .++++++.|.++||+.+|+|+.++++++++|+++
T Consensus 312 Id~ve~~d~f-----a~~~~~~~~~lg~~~--~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~~-------------- 370 (394)
T 3ss6_A 312 ADLLEINEAF-----AAQYLAVEKELDLDR--EKVNVNGSGVGLGHPIGCTGARITVSLIHELKRR-------------- 370 (394)
T ss_dssp CSEEEECCSB-----HHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH--------------
T ss_pred cCEEEeCCch-----HHHHHHHHHHhCCCC--CCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHhc--------------
Confidence 9999999432 368888888887543 3577888888999999999999999999999873
Q ss_pred CCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 320 FNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
+.++.|++.++.||...++||++.
T Consensus 371 --------------~~~~gl~~~c~ggG~g~a~~~e~~ 394 (394)
T 3ss6_A 371 --------------GLEKGIASLCVGGGIGVALFIEAL 394 (394)
T ss_dssp --------------TCCEEEEEEEETTTEEEEEEEEEC
T ss_pred --------------CCCEEEEEEccCcCceeEEEEEcC
Confidence 247889999999999999999874
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=266.36 Aligned_cols=273 Identities=23% Similarity=0.365 Sum_probs=212.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
+..+|+++|+++||+|+|+++++++ ++++|+..+.. .....+.+++..+
T Consensus 28 ~~~~L~~~a~~~Al~~agi~~~~Id-----~v~~g~~~~~~--------------------------~~~~~a~~~~~~l 76 (395)
T 4e1l_A 28 SAVQLGTIAVKEAISRVGLNLSEID-----EVIIGNVLQTG--------------------------LGQNVARQIAINA 76 (395)
T ss_dssp CHHHHHHHHHHHHHHHTTCCGGGCC-----EEEEECCCCSS--------------------------TTCCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCCC--------------------------CcchHHHHHHHHc
Confidence 4678999999999999999999998 99999865221 1124577899999
Q ss_pred CC--CCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhh------------------------
Q 018323 93 GF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCK------------------------ 146 (358)
Q Consensus 93 gl--~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~------------------------ 146 (358)
|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.++..........
T Consensus 77 Gl~~~~p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (395)
T 4e1l_A 77 GIPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFN 156 (395)
T ss_dssp TCCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETT
T ss_pred CCCCCceEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccc
Confidence 99 5799999999999999999999999999999999999998776432110000
Q ss_pred ------------------------------hcccc---c-cc-----------------CCCCCCCCCC-----------
Q 018323 147 ------------------------------SRALT---T-KY-----------------NGTPQEASRP----------- 164 (358)
Q Consensus 147 ------------------------------~~~l~---~-~~-----------------~~~~~~~~~p----------- 164 (358)
..... . .+ ..++++..|+
T Consensus 157 ~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~~~~~~d~~~r~~~t~e~l~~~~ 236 (395)
T 4e1l_A 157 QYHMGITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLK 236 (395)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEEEEECSCSCCCTTCCHHHHHHCC
T ss_pred cchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcceEECCccccCCCCCHHHHhhCC
Confidence 00000 0 00 0112333332
Q ss_pred --Cc-----CCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 018323 165 --FD-----CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQS 237 (358)
Q Consensus 165 --f~-----~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~ 237 (358)
|+ ...++..++||++++||++++.|++++.+++++|.|++.+++ .|.+...++..+++++|+++|+++
T Consensus 237 ~v~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~al~~agl~~ 311 (395)
T 4e1l_A 237 PAFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGV-----EPEVMGTGPIPATRKALKKAGLSI 311 (395)
T ss_dssp BSSSTTCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGTTCTHHHHHHHHHHHTTCCG
T ss_pred CccCCCCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccC-----CCCcchHHHHHHHHHHHHHcCCCH
Confidence 33 124566789999999999999999999999999999998874 333344457889999999999999
Q ss_pred CCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCC
Q 018323 238 HQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPD 317 (358)
Q Consensus 238 ~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~ 317 (358)
+||||||+|.. ..+|..++.+.|+... .++++++.|.++||+.+|+|+.++++++++|+++
T Consensus 312 ~dId~ve~~d~-----fa~~~~~~~~~lg~~~--~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~------------ 372 (395)
T 4e1l_A 312 NDIDLIEANEA-----FAAQALAVKNELQIDS--SKLNVNGGAIALGHPIGASGARILVTLIYEMQKR------------ 372 (395)
T ss_dssp GGCSEEEECCS-----BHHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHH------------
T ss_pred HHcCEEEecCh-----hHHHHHHHHHHhCCCC--CCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhc------------
Confidence 99999999933 1257777778777543 4577888899999999999999999999999873
Q ss_pred CCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 318 PIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
..++.+++.++-||...++||++
T Consensus 373 ----------------~~~~gl~~~c~ggG~g~a~~~e~ 395 (395)
T 4e1l_A 373 ----------------KVETGLATLCIGGGQGISMVVSR 395 (395)
T ss_dssp ----------------TCSEEEEEEESSTTEEEEEEEEC
T ss_pred ----------------CCCEEEEEEccCCCceEEEEEeC
Confidence 24788999999999999999985
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-34 Score=269.10 Aligned_cols=278 Identities=20% Similarity=0.223 Sum_probs=206.7
Q ss_pred CCHHHHHHHHHHHHHHHHC-CCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHH
Q 018323 11 IARFIAYALCAADEALHDA-KWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVS 89 (358)
Q Consensus 11 ~~~~~~l~~~aa~~Al~dA-G~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia 89 (358)
..+..+|+++|+++||+|+ |+++++++ ++++|+..+... .....+.+++
T Consensus 24 ~~~~~~L~~~a~~~Al~~a~gi~~~~Id-----~v~~g~~~~~~~-------------------------~~~~~a~~~~ 73 (387)
T 3goa_A 24 NVRAEDLSAHLMRSLLARNPSLTAATLD-----DIYWGCVQQTLE-------------------------QGFNIARNAA 73 (387)
T ss_dssp TSCHHHHHHHHHHHHHHHCTTSCGGGCC-----EEEEECSCCSBT-------------------------TTTTHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHcC-----EEEEEcccCCcc-------------------------cccHHHHHHH
Confidence 3567889999999999999 99999998 899998653210 0134577899
Q ss_pred HHcCC--CCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHH--------------------------
Q 018323 90 MKYGF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM-------------------------- 141 (358)
Q Consensus 90 ~~lgl--~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~-------------------------- 141 (358)
..+|+ ..|+++|+++|+|++.||..|+++|++|++|++||+|+|.++..+..
T Consensus 74 ~~~Gl~~~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~ 153 (387)
T 3goa_A 74 LLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEM 153 (387)
T ss_dssp HHTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC-------CCCHHHHHH
T ss_pred HHcCCCCCCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccccCcCcccccccccccccHHHHHHH
Confidence 99999 46999999999999999999999999999999999999987653211
Q ss_pred ------------HHHh---h--------hcccccc-------------cCCCCCCCCCC-------------CcC-----
Q 018323 142 ------------AGFC---K--------SRALTTK-------------YNGTPQEASRP-------------FDC----- 167 (358)
Q Consensus 142 ------------~~~~---~--------~~~l~~~-------------~~~~~~~~~~p-------------f~~----- 167 (358)
..+. . .+.+... ...++++.+|| |+.
T Consensus 154 ~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~ 233 (387)
T 3goa_A 154 LSRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTV 233 (387)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCC
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeeccccCcccccccccccCCCCCHHHHhcCCCcccCCCCce
Confidence 0000 0 0000000 00012333333 543
Q ss_pred -CCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEec
Q 018323 168 -GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAH 246 (358)
Q Consensus 168 -~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h 246 (358)
..++..++||++++||++++.|+++|.+++++|+|++.+++. |+....+...+++++|+++|++|+||||||+|
T Consensus 234 t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~did~ve~h 308 (387)
T 3goa_A 234 TAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCD-----PSIMGYGPVPASKLALKKAGLSASDIDVFEMN 308 (387)
T ss_dssp CGGGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECC-----TTSTTCTHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred ecccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCC-----CCcchHHHHHHHHHHHHHcCCCHHHcCEEEEe
Confidence 245667999999999999999999999999999999998874 33333456889999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHHHHhhcccCCCCccee--cccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCC
Q 018323 247 ATSTPLGDTVEATAIRTVFSDHATSGSLAFS--STKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNF 324 (358)
Q Consensus 247 ~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~--~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~ 324 (358)
.+.+.. +...++. ++.... ...+++ ..+..+||+++|+|+.++++++++|+++
T Consensus 309 ~~f~~~----~~~~~~~-lg~~~~-~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~~------------------- 363 (387)
T 3goa_A 309 EAFAAQ----ILPCIKD-LGLMEQ-IDEKINLNGGAIALGHPLGCSGARISTTLINLMERK------------------- 363 (387)
T ss_dssp CSBHHH----HHHHHHH-TTCGGG-HHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT-------------------
T ss_pred CcchHH----HHHHHHH-hCCCcC-CCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHhc-------------------
Confidence 776542 4333333 332100 123444 4444799999999999999999999872
Q ss_pred CccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 325 MPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 325 ~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
..++++++...-||...++||++.
T Consensus 364 ---------~~~~gl~~~c~ggG~g~a~~~e~~ 387 (387)
T 3goa_A 364 ---------DAQFGLATMCIGLGQGIATVFERV 387 (387)
T ss_dssp ---------TCSEEEEEEEETTTEEEEEEEECC
T ss_pred ---------CCCEEEEEeccCcCceEEEEEEeC
Confidence 247888888888899999999873
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-33 Score=260.98 Aligned_cols=275 Identities=19% Similarity=0.180 Sum_probs=195.1
Q ss_pred HHHHHHHHHHHHHHHH-CCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHH
Q 018323 13 RFIAYALCAADEALHD-AKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 91 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~d-AG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 91 (358)
+..+|+.+|+++||+| +|++++++| ++++|+...... ....++.+++..
T Consensus 31 ~~~~L~~~A~~~AL~~~AGl~~~dId-----~vi~g~~~~~~~-------------------------~~~~~a~~va~~ 80 (407)
T 3svk_A 31 KPLNLVVGLVDELRRRYPDLDETLIS-----DMILGVVSPVGD-------------------------QGGDIARTAVLA 80 (407)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCGGGEE-----EEEEECC---------------------------------CHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhhcCcCHHHCC-----EEEEEecCcccc-------------------------ccCcHHHHHHHH
Confidence 4678999999999999 999999888 899987642110 013457889999
Q ss_pred cCC--CCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHH--------------------HHHh----
Q 018323 92 YGF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM--------------------AGFC---- 145 (358)
Q Consensus 92 lgl--~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~--------------------~~~~---- 145 (358)
+|+ +.|+++|+++|+|++.||..|+++|++|++|++||+|+|.++..+.. .+..
T Consensus 81 lGlp~~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~Ae~~ 160 (407)
T 3svk_A 81 AGLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGAWATDPETNYRIGFVPQGIGADLI 160 (407)
T ss_dssp TTCCTTCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-----------CCCCTTTCCCCCCHHHHHHHHHH
T ss_pred cCCCCCCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCcccccccccccCchhhccccccCHHHHHHHH
Confidence 999 56999999999999999999999999999999999999987652210 0000
Q ss_pred ------------hhccc---------cc-cc--------------CCCCCCCCCC-------------CcC---------
Q 018323 146 ------------KSRAL---------TT-KY--------------NGTPQEASRP-------------FDC--------- 167 (358)
Q Consensus 146 ------------~~~~l---------~~-~~--------------~~~~~~~~~p-------------f~~--------- 167 (358)
..... .. .+ ..+++...|+ |+.
T Consensus 161 a~~~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~~g~~~~~pd~~~r~~~t~e~l~~~~~vf~~~g~v~~~~~ 240 (407)
T 3svk_A 161 ATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGVGEMGGFDD 240 (407)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEECTTSCEEECSCTTCCTTCCHHHHHTSCBSCC----------
T ss_pred HHHhCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeecCCCceeeCCccccCCCCCHHHHhhCCCeecCCCccccccc
Confidence 00000 00 00 0123333332 432
Q ss_pred -----------------CCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHH
Q 018323 168 -----------------GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRAL 230 (358)
Q Consensus 168 -----------------~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al 230 (358)
..+...++||++++||++++.|++++.+++++|.|++.+++.. .....+...+++++|
T Consensus 241 ~~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p-----~~~~~~~~~a~~~al 315 (407)
T 3svk_A 241 VALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDP-----VIMLTGPTPATRKVL 315 (407)
T ss_dssp ---CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC-----------CCCTHHHHHHHHH
T ss_pred cccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCC-----ccccHHHHHHHHHHH
Confidence 1355569999999999999999999999999999999877532 222334578999999
Q ss_pred HHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCC
Q 018323 231 KQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLT 310 (358)
Q Consensus 231 ~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~ 310 (358)
+++|++++|||++|+|.+.+.. |...++ .++... .++.++..+..+||+.+|+|+.++++++++|+++
T Consensus 316 ~~Agl~~~dId~~e~hdaf~~~----~l~~~~-~lg~~~--~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~----- 383 (407)
T 3svk_A 316 DRAGLTIDDIDLFELNEAFASV----VLKFQK-DLNIPD--EKLNVNGGAIAMGHPLGATGAMITGTMVDELERR----- 383 (407)
T ss_dssp HHHTCCGGGCSEEEECCSBHHH----HHHHHH-HHTCCG--GGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHH-----
T ss_pred HHcCCCHHHCCEEEEeChhHHH----HHHHHH-HhCCCC--CCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhc-----
Confidence 9999999999999999665443 433333 344322 2344444455799999999999999999999872
Q ss_pred CCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 311 LNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
+.+++|++.++.||...++||++.
T Consensus 384 -----------------------~~~~gl~~~c~ggG~g~a~~~e~~ 407 (407)
T 3svk_A 384 -----------------------NARRALITLCIGGGMGVATIIERV 407 (407)
T ss_dssp -----------------------TCCEEEEEEECSSSCEEEEEEEEC
T ss_pred -----------------------CCCEEEEEeeccCcceEEEEEEcC
Confidence 258899999999999999999974
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-32 Score=248.85 Aligned_cols=250 Identities=17% Similarity=0.168 Sum_probs=188.5
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHH
Q 018323 12 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 91 (358)
Q Consensus 12 ~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 91 (358)
++..+|+++|+++||+|+|+++++++ +|++++..+. ...+..+.+|+..
T Consensus 48 ~~~~~la~~a~~~al~~ag~~~~~id-----~vi~~~~~~~--------------------------~~~~~~a~~v~~~ 96 (322)
T 1ub7_A 48 EYTSDLAFKAVEDLLRRHPGALEGVD-----AVIVATNTPD--------------------------ALFPDTAALVQAR 96 (322)
T ss_dssp CCHHHHHHHHHHHHHHHSTTTTTTEE-----EEEEECSSCS--------------------------EEESCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCC--------------------------CCCCcHHHHHHHH
Confidence 46789999999999999999887776 7888886421 1112367899999
Q ss_pred cCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCc
Q 018323 92 YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 171 (358)
Q Consensus 92 lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g 171 (358)
||+++|+++++++|+|++.||..|+++|++|++|.+||+|+|.+ ++. ..|+| ++++
T Consensus 97 lgl~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~-s~~----------------------~~~~d-~~~~ 152 (322)
T 1ub7_A 97 FGLKAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEAL-SKI----------------------IDWND-RATA 152 (322)
T ss_dssp TTCCCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECG-GGT----------------------SCTTC-HHHH
T ss_pred hCCCCEEEeeCccchHHHHHHHHHHHHHHcCCCCEEEEEEechh-ccc----------------------cChhh-cccc
Confidence 99988999999999999999999999999999999999999984 221 01344 5678
Q ss_pred eeeecceEEEEeccHHHHHhcCCeeeEEE-EeeeeecCCCCCC-----CCCC---------Ch--------HHHHHHHHH
Q 018323 172 FVIGEGSGVLVLEELEHAKKRGAKIYAEV-RGYGMSGDAHHIT-----QPHI---------DG--------KGAILAMTR 228 (358)
Q Consensus 172 ~~~geGaaa~vL~~~~~A~~~g~~~~a~i-~g~~~~~~~~~~~-----~~~~---------~~--------~~~~~~~~~ 228 (358)
+++||||+|+||++.+. +..+++.. .+.+...+..+.. .|.. .+ ..+.+++++
T Consensus 153 ~~~GdGA~A~vL~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ 228 (322)
T 1ub7_A 153 VLFGDGGGAAVVGKVRE----GYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLE 228 (322)
T ss_dssp TTBCCEEEEEEEECCCT----TCEEEEEEEEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHH
T ss_pred eeeccccEEEEEEecCC----CCceeEEEEEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHH
Confidence 99999999999997653 33455544 2222222211110 0221 22 467789999
Q ss_pred HHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCC
Q 018323 229 ALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAP 308 (358)
Q Consensus 229 al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ip 308 (358)
+|+++|++++|||+|++|+++++..|. +.+.|+... . .+.+.|..+||+.+|++.+.+.++ ++++.+.
T Consensus 229 al~~agl~~~did~~~~H~~~~~~~d~-----~~~~lg~~~--~--~~~~~~~~~Gh~~~As~~~~l~~~---l~~g~~~ 296 (322)
T 1ub7_A 229 AIEKAGLTPEDIRLFVPHQANLRIIDA-----ARERLGLPW--E--RVAVNVDRYGNTSTASIPLALKEA---VDAGRIR 296 (322)
T ss_dssp HHHHHTCCGGGCSEEEECCSCHHHHHH-----HHHTTTCCG--G--GBCCCHHHHCBCGGGHHHHHHHHH---HHHTSSC
T ss_pred HHHHcCCCHHHCCEEEEcCCCHHHHHH-----HHHHcCCCH--H--HHHHHHHhhCcHHHHHHHHHHHHH---HHhCCCC
Confidence 999999999999999999999987664 555665432 1 234678899999999999987765 4555431
Q ss_pred CCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 309 LTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 309 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
+.+.+++++||+|++++++||+.+
T Consensus 297 -------------------------~g~~~l~~~~G~G~~~~~~vl~~~ 320 (322)
T 1ub7_A 297 -------------------------EGDHVLLVSFGAGLTWAAAVLTWG 320 (322)
T ss_dssp -------------------------TTCEEEEEEEETTTEEEEEEEECC
T ss_pred -------------------------CCCEEEEEEEChhheeEEEEEEeC
Confidence 247899999999999999999753
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=238.24 Aligned_cols=244 Identities=17% Similarity=0.194 Sum_probs=186.1
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHH
Q 018323 12 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 91 (358)
Q Consensus 12 ~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 91 (358)
++..+|+++|+++||+|+|+++++++ +|++++..++. ..+..+.+|+..
T Consensus 48 ~~~~~l~~~a~~~al~~ag~~~~~id-----~v~~~~~~~~~--------------------------~~~~~a~~v~~~ 96 (309)
T 2ebd_A 48 ETITYMATQAAKEALREANLSPEELD-----LIILATLTPQK--------------------------RFPSTACLVQAQ 96 (309)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCS-----EEEEECSSCSS--------------------------SSSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCCC--------------------------CCCcHHHHHHHH
Confidence 57889999999999999999998887 89999875321 112367899999
Q ss_pred cCCCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCC
Q 018323 92 YGFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 170 (358)
Q Consensus 92 lgl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 170 (358)
||+++ |+++++++|+|++.||..|+++|++|++|.+||+|+|.+... + . |+.+.+
T Consensus 97 lgl~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~-----------~------------~-~~~~~~ 152 (309)
T 2ebd_A 97 LKAKGVYAFDISAACSGFIYALDIADSFIKSGKAKNVLVIGAEKLSEA-----------V------------D-WEDRST 152 (309)
T ss_dssp HTCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGT-----------C------------C-TTCTTT
T ss_pred hCCCCceEEecCccchHHHHHHHHHHHHHHCCCCCEEEEEEecccccc-----------c------------C-ccchhh
Confidence 99998 999999999999999999999999999999999999984311 0 1 334567
Q ss_pred ceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCC---CCCCC-----CCChH--------HHHHHHHHHHHHcC
Q 018323 171 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH---HITQP-----HIDGK--------GAILAMTRALKQSG 234 (358)
Q Consensus 171 g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~---~~~~~-----~~~~~--------~~~~~~~~al~~ag 234 (358)
++++||||+|+||++.+.+ ..+++.+ ..+++. +...| ...+. .+.++++++|+++|
T Consensus 153 ~~~~gdGaaA~vL~~~~~~----~~i~~~~----~~~~g~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~ag 224 (309)
T 2ebd_A 153 CVLFGDGAGAVVVTRSEDK----SDILATR----MYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAG 224 (309)
T ss_dssp TTTBCEEEEEEEEEECSSS----CEEEEEE----EEECGGGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccccEEEEEEecCCC----CceeEEE----EEecCCccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcC
Confidence 8999999999999986542 2344433 333332 22222 22332 56789999999999
Q ss_pred CCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCC
Q 018323 235 LQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLA 314 (358)
Q Consensus 235 l~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~ 314 (358)
++++|||+|++|+++++..| ++.+.|+... .+ +.+.|..+||+.+|++++.|.+++. ++.+
T Consensus 225 l~~~did~~~~H~~~~~~~~-----~~~~~lg~~~--~~--~~~~~~~~Gh~~~As~~~~L~~~~~---~g~~------- 285 (309)
T 2ebd_A 225 VKPEEVSLVIPHQANVRIIN-----ALAEKLNIPK--EK--VFVNIQKYGNTSAASIPIALHEAIK---EGKV------- 285 (309)
T ss_dssp CCGGGCSEEEECCSCHHHHH-----HHHHHTTCCG--GG--BCCCHHHHCBCGGGHHHHHHHHHHH---TTCC-------
T ss_pred CCHHHCCEEEEcCCCHHHHH-----HHHHHhCCCH--HH--hhhhHhhhcchHHHHHHHHHHHHHH---cCCC-------
Confidence 99999999999999988655 3556666432 12 3356889999999999999987753 2321
Q ss_pred CCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 315 KPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
.+.+.+++.+||.|.+..+++|+
T Consensus 286 ------------------~~G~~~l~~~~G~G~~~~~~~l~ 308 (309)
T 2ebd_A 286 ------------------KRGDLILMTAMGGGLTWGAVLLR 308 (309)
T ss_dssp ------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred ------------------CCCCEEEEEEEchhhhhEEEEEE
Confidence 12467888999999999999986
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=239.62 Aligned_cols=248 Identities=17% Similarity=0.162 Sum_probs=186.6
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHH
Q 018323 11 IARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM 90 (358)
Q Consensus 11 ~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 90 (358)
.++..+|+++|+++||+|+|+++++++ +|++++..+. ...+..+.+|+.
T Consensus 48 ~~~~~~l~~~a~~~al~~ag~~~~~id-----~vi~g~~~~~--------------------------~~~~~~a~~v~~ 96 (317)
T 1hnj_A 48 NETVSTMGFEAATRAIEMAGIEKDQIG-----LIVVATTSAT--------------------------HAFPSAACQIQS 96 (317)
T ss_dssp TCCHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCS--------------------------CSSSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCC--------------------------CCCCcHHHHHHH
Confidence 457889999999999999999998887 8899886521 112356889999
Q ss_pred HcCCC-CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCC
Q 018323 91 KYGFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 169 (358)
Q Consensus 91 ~lgl~-gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 169 (358)
.||++ +|+++++++|+|++.||..|+++|++|++|.+||+|+|.++... . |+.+.
T Consensus 97 ~lgl~~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~~-----------~-------------~~d~~ 152 (317)
T 1hnj_A 97 MLGIKGCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLARTC-----------D-------------PTDRG 152 (317)
T ss_dssp HHTCCSSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHHHHS-----------C-------------TTCHH
T ss_pred HhCCCCCeEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhcccC-----------C-------------chhcc
Confidence 99998 89999999999999999999999999999999999999732110 0 22234
Q ss_pred CceeeecceEEEEeccHHHHHhcCCeeeEEEEe-eeeecCCCCCCCC-----------CCChH--------HHHHHHHHH
Q 018323 170 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRG-YGMSGDAHHITQP-----------HIDGK--------GAILAMTRA 229 (358)
Q Consensus 170 ~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g-~~~~~~~~~~~~~-----------~~~~~--------~~~~~~~~a 229 (358)
+|+++||||+|+||++.+. ..+++.+.+ .+...+..+...+ ...+. .+.++++++
T Consensus 153 ~~~~~GdGA~A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~a 227 (317)
T 1hnj_A 153 TIIIFGDGAGAAVLAASEE-----PGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDET 227 (317)
T ss_dssp HHTTBCCEEEEEEEEEESS-----CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHH
T ss_pred cceeeccccEEEEEEecCC-----CceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHH
Confidence 5899999999999997652 246666544 2221222111111 12233 667899999
Q ss_pred HHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCC
Q 018323 230 LKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPL 309 (358)
Q Consensus 230 l~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp 309 (358)
|+++|++++|||||++|+++++..|. +.+.|+... -.+.+.|..+||+.+|+..+.|.+++ +.+.+
T Consensus 228 L~~agl~~~did~v~~H~~~~~~~d~-----i~~~lg~~~----~~~~~~~~~~Gn~~~As~~~~L~~~~---~~~~~-- 293 (317)
T 1hnj_A 228 LAANNLDRSQLDWLVPHQANLRIISA-----TAKKLGMSM----DNVVVTLDRHGNTSAASVPCALDEAV---RDGRI-- 293 (317)
T ss_dssp HHHTTCCGGGCCEEEECCSCHHHHHH-----HHHHTTCCG----GGBCCCHHHHCBCGGGHHHHHHHHHH---HTTCS--
T ss_pred HHHcCCCHHHCCEEEEcCCCHHHHHH-----HHHHcCCCH----HHhHhhHhhhCcHHHHHHHHHHHHHH---HhCCC--
Confidence 99999999999999999999987663 556666432 13457889999999999998887664 33332
Q ss_pred CCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 310 TLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
.+.+.++..+||.|.+..+++|+
T Consensus 294 -----------------------~~G~~vll~~~G~G~t~~~~~l~ 316 (317)
T 1hnj_A 294 -----------------------KPGQLVLLEAFGGGFTWGSALVR 316 (317)
T ss_dssp -----------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred -----------------------CCCCEEEEEEEchhheeEEEEEE
Confidence 12367888999999999988886
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=99.96 E-value=7.1e-30 Score=234.14 Aligned_cols=248 Identities=17% Similarity=0.217 Sum_probs=184.3
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHH
Q 018323 12 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 91 (358)
Q Consensus 12 ~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 91 (358)
.+..+|+++|+++||+|+|+++++++ +|++++..+++ .. +..+.+|+..
T Consensus 49 ~~~~~l~~~a~~~al~~ag~~~~~id-----~vi~~~~~~~~---------------------~~-----~~~a~~v~~~ 97 (313)
T 1zow_A 49 QDTSDLAYEASVKAIADAGIQPEDID-----MIIVATATGDM---------------------PF-----PTVANMLQER 97 (313)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSSCSC---------------------SS-----SCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCCC---------------------CC-----CcHHHHHHHH
Confidence 36789999999999999999988887 89999865321 11 2357899999
Q ss_pred cCCC-CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCC
Q 018323 92 YGFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 170 (358)
Q Consensus 92 lgl~-gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 170 (358)
+|++ +|+++++++|+|++.||..|+++|++|++|.+||+|+|.++.. .+|++. .+
T Consensus 98 lgl~~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~-----------------------~~~~d~-~~ 153 (313)
T 1zow_A 98 LGTGKVASMDQLAACSGFMYSMITAKQYVQSGDYHNILVVGADKLSKI-----------------------TDLTDR-ST 153 (313)
T ss_dssp HTCCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEEGGGT-----------------------CCTTCH-HH
T ss_pred hCCCCCcEEEECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccccc-----------------------cCcccc-cc
Confidence 9998 5999999999999999999999999999999999999974221 123432 36
Q ss_pred ceeeecceEEEEeccHHHHHhcCCeeeEE-EEeeeeecCCCCCCCC----CCCh--------HHHHHHHHHHHHHcCCCC
Q 018323 171 GFVIGEGSGVLVLEELEHAKKRGAKIYAE-VRGYGMSGDAHHITQP----HIDG--------KGAILAMTRALKQSGLQS 237 (358)
Q Consensus 171 g~~~geGaaa~vL~~~~~A~~~g~~~~a~-i~g~~~~~~~~~~~~~----~~~~--------~~~~~~~~~al~~agl~~ 237 (358)
++++||||+|+||++.+. +.++++. +.+.+...+..+...| ...+ ..+.++++++|+++|+++
T Consensus 154 ~~~~gdGa~A~vl~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~ 229 (313)
T 1zow_A 154 AVLFGDGAGAVIIGEVSE----GRGIISYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLTS 229 (313)
T ss_dssp HTTBCEEEEEEEEEECST----TCEEEEEEEEECGGGGGGEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHTTCCG
T ss_pred eeeeccceEEEEEEecCC----CCceeEEEEEEcCCCcCeEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 899999999999997653 2344432 3332222222111111 0122 356789999999999999
Q ss_pred CCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCC
Q 018323 238 HQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPD 317 (358)
Q Consensus 238 ~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~ 317 (358)
+|||+|++|+++++..|.+ .+.|+... .+++ ..|..+||+.+|++++.|.+++ +++.+
T Consensus 230 ~did~~~~H~~~~~~~d~~-----~~~lg~~~--~~~~--~~~~~~Gh~~~as~~~~L~~~~---~~~~~---------- 287 (313)
T 1zow_A 230 DDIDLFIPHQANIRIMESA-----RERLGISK--DKMS--VSVNKYGNTSAASIPLSIDQEL---KNGKL---------- 287 (313)
T ss_dssp GGCSEEEECCSCHHHHHHH-----HHHHTCCG--GGBC--CCHHHHCBCGGGHHHHHHHHHH---HTTCC----------
T ss_pred HHCCEEEEcCCCHHHHHHH-----HHHhCCCH--HHHH--HhHhhhCchHHHHHHHHHHHHH---HcCCC----------
Confidence 9999999999999987764 44555332 1233 3588999999999999887764 33321
Q ss_pred CCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 318 PIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
.+.+.+++.+||.|.+..+++|+
T Consensus 288 ---------------~~g~~vl~~~~G~G~t~~~~~l~ 310 (313)
T 1zow_A 288 ---------------KDDDTIVLVGFGGGLTWGAMTIK 310 (313)
T ss_dssp ---------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred ---------------CCCCEEEEEEEchhhhheEEEEE
Confidence 22477899999999999999986
|
| >4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.9e-30 Score=247.24 Aligned_cols=317 Identities=15% Similarity=0.092 Sum_probs=199.3
Q ss_pred ccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHH
Q 018323 9 KSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHV 88 (358)
Q Consensus 9 ~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i 88 (358)
+.+++ .+|+.+|+++||+|||+++++++ .--.|+++...... . .............+..+
T Consensus 38 ~~~s~-~dL~a~Ai~~AL~dAGl~p~~Vd-~vI~g~~~~~~~~~-~-----------------~~~~~~~g~~~~~~~~v 97 (520)
T 4egv_A 38 RGMSS-VELATEAAKAALHDCGADADTVA-RAIDTVAGTRQFEI-S-----------------GPASAPLGVSSNYPRSV 97 (520)
T ss_dssp -CCCH-HHHHHHHHHHHHHHTSSCHHHHH-HHCCEEEECCC--------------------------------CCHHHHH
T ss_pred CCCCH-HHHHHHHHHHHHHHhCcCHHHcc-eEEEEEeecccccc-c-----------------chhhhhhccccCHHHHH
Confidence 34555 46889999999999999987754 11124444332110 0 00111222334567789
Q ss_pred HHHcCCCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhh------------------c-
Q 018323 89 SMKYGFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKS------------------R- 148 (358)
Q Consensus 89 a~~lgl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~------------------~- 148 (358)
+..+|+.+ +.++++.+|+|++.+|..|++.|++|++|++|++|+|++++.......... .
T Consensus 98 a~~lGl~~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (520)
T 4egv_A 98 ARNIGADPAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGYDG 177 (520)
T ss_dssp HHHHTCCCSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC-------------------------------
T ss_pred HHHcCCCCceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccccccccccch
Confidence 99999987 778899999999999999999999999999999999997654321100000 0
Q ss_pred ---cccccc------------------------------------------CCCCCCC--------------------CC
Q 018323 149 ---ALTTKY------------------------------------------NGTPQEA--------------------SR 163 (358)
Q Consensus 149 ---~l~~~~------------------------------------------~~~~~~~--------------------~~ 163 (358)
.+...+ ..+|... +.
T Consensus 178 ~a~~~~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np~a~~r~~~t~E~l~~l~p~~r~i~~ 257 (520)
T 4egv_A 178 IFDEYTIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSKVAAKNPYSSAPTERSVEELLTVTASNRMIVD 257 (520)
T ss_dssp ---CTTGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCTTSSSCCCCCHHHHHSCCSSSCEEET
T ss_pred hHHHHHHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEecccccccCccccccCCCCHHHhcccCcccccccC
Confidence 000000 0001110 01
Q ss_pred CCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCC--CCCCCCC-ChHHHHHHHHHHHHHcCCCCCCc
Q 018323 164 PFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH--HITQPHI-DGKGAILAMTRALKQSGLQSHQV 240 (358)
Q Consensus 164 pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~--~~~~~~~-~~~~~~~~~~~al~~agl~~~di 240 (358)
|+....+...++|||+|+||.+++.|+++|.+++++|.+++...... ....++. ...+...+++++|+++|++++||
T Consensus 258 p~~ta~nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~~~~~a~~~al~~agl~~~di 337 (520)
T 4egv_A 258 PYPRLMVARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASPASVTAVNEALRVAGIGLDDV 337 (520)
T ss_dssp TEEGGGCC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCHHHHHHHHHHHHHHTCCGGGE
T ss_pred CcccccccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccChHHHHHHHHHHHHhCCCHHHC
Confidence 22222345568999999999999999999999988887776554322 1222221 24678899999999999999999
Q ss_pred cEEEecCCCCCCCcHHHHHHHHHHhhcccC-CCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Q 018323 241 DYVNAHATSTPLGDTVEATAIRTVFSDHAT-SGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 319 (358)
Q Consensus 241 d~i~~h~~gt~~~d~~E~~a~~~~~~~~~~-~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~ 319 (358)
|++|+|... .++..+..+.++.... ..++.++..+.++||+++++|+..+++++++||++..+..+. .+++.
T Consensus 338 d~~E~~dAF-----~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~~~~~~L~--~~~gg 410 (520)
T 4egv_A 338 AAFDLYSCF-----PFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNEMRDKPGQFALV--GANGG 410 (520)
T ss_dssp EEEEECCSS-----SHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHHHHHSTTCEEEE--EEEET
T ss_pred CEEEEeCCc-----HHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHHHhcCCCCceEE--eCCCC
Confidence 999999432 2244444444543221 234556666668999999999999999999999998877665 46666
Q ss_pred CCCCCC-------ccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 320 FNDNFM-------PLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 320 ~~~~~~-------~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
+.+... |..++....++.+.+++ +|+|++++..
T Consensus 411 ~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~-----~~~~~~~~~~ 450 (520)
T 4egv_A 411 IASKYSVGIYSTEPADWVADNSAQLQAEHD-----AQPKVAITEK 450 (520)
T ss_dssp TTTEEEEEEEESSCCCCCCCCHHHHHHHHH-----TSCCCCBCSS
T ss_pred eeeeeeEEEEcCCCCCCCCCCCCccccccc-----CCCCcccccC
Confidence 655411 11122223345555544 7888888753
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=7.8e-29 Score=229.62 Aligned_cols=249 Identities=18% Similarity=0.158 Sum_probs=182.8
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHH
Q 018323 11 IARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM 90 (358)
Q Consensus 11 ~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 90 (358)
.++..+|+++|+++||+|+|+++++++ +|++++..+++ . .+..+.+|+.
T Consensus 57 ~~~~~~la~~Aa~~al~~ag~~~~~id-----~vi~gt~~~~~---------------------~-----~p~~a~~v~~ 105 (339)
T 1mzj_A 57 DETIQVMGVAASRRALEHAGVDPAEID-----LVVVSTMTNFV---------------------H-----TPPLSVAIAH 105 (339)
T ss_dssp TCCHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCCC---------------------C-----SSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCCC---------------------C-----CChHHHHHHH
Confidence 356889999999999999999998887 89999875321 1 1236789999
Q ss_pred HcCCC-CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCC
Q 018323 91 KYGFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 169 (358)
Q Consensus 91 ~lgl~-gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 169 (358)
.||++ +|+++++++|+|++.||..|+++|++|.+|.+||+|+|.++ +.. . ++.+.
T Consensus 106 ~lgl~~~~~~~v~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s-~~~----------~-------------~~d~~ 161 (339)
T 1mzj_A 106 ELGADNAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERMT-DVI----------D-------------LADRS 161 (339)
T ss_dssp HHTCTTCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEGG-GGS----------C-------------SSCTT
T ss_pred HhCCCCccEEEccccchHHHHHHHHHHHHHHCCCCCEEEEEEEcccc-ccc----------C-------------ccccc
Confidence 99998 69999999999999999999999999999999999999842 220 0 12346
Q ss_pred CceeeecceEEEEeccHHHHHhcCCeeeEE-EEeeeeecCCCCCC--CCC-------------CCh--------HHHHHH
Q 018323 170 DGFVIGEGSGVLVLEELEHAKKRGAKIYAE-VRGYGMSGDAHHIT--QPH-------------IDG--------KGAILA 225 (358)
Q Consensus 170 ~g~~~geGaaa~vL~~~~~A~~~g~~~~a~-i~g~~~~~~~~~~~--~~~-------------~~~--------~~~~~~ 225 (358)
+++++||||+|+||++.+. ..+++. +.+.+...+..+.. .|+ ..+ ..+.++
T Consensus 162 ~~~~~GdGA~A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~ 236 (339)
T 1mzj_A 162 LSFLFGDGAGAAVVGPSDV-----PGIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPA 236 (339)
T ss_dssp TTTTBCEEEEEEEEEEESS-----CCBCCCEEEECGGGGGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHH
T ss_pred cceEeccCceEEEEEecCC-----CCeEEEEEEEcCCCCCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHH
Confidence 7899999999999987642 233332 12222111111110 010 012 467789
Q ss_pred HHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCC-CcceecccCCcCCcccchhHHHHHHHHHHHHh
Q 018323 226 MTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSG-SLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHH 304 (358)
Q Consensus 226 ~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~-~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~ 304 (358)
++++|+++|++++|||+|++|+++++.+|. +.+.++... . +++ .....+||+.+|+..+.|.+++ +.
T Consensus 237 i~~aL~~agl~~~did~v~~H~~~~~~~d~-----i~~~lg~~~--~~~~~--~~~~~~Gn~~sAs~~~~L~~~~---~~ 304 (339)
T 1mzj_A 237 AREALEVAGLTVGDLVAFVPHQANLRIIDV-----LVDRLGVPE--HVVVS--RDAEDTGNTSSASVALALDRLV---RS 304 (339)
T ss_dssp HHHHHHTTTCCGGGCSEEEECCSCHHHHHH-----HHHHHTCCT--TSEEC--CTHHHHCBCTTHHHHHHHHHHH---HH
T ss_pred HHHHHHHcCCCHHHCCEEEECCCCHHHHHH-----HHHHhCCCc--cceee--ehhhhcCchHHHHHHHHHHHHH---Hc
Confidence 999999999999999999999999998775 445555432 1 232 2346899999999998877654 33
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 305 GVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 305 ~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
+.+ .+.+.+++.+||.|.+..+++|+.
T Consensus 305 g~~-------------------------~~G~~vll~~~G~G~t~~~~~l~~ 331 (339)
T 1mzj_A 305 GAV-------------------------PGGGPALMIGFGAGLSYAGQALLL 331 (339)
T ss_dssp TSS-------------------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred CCC-------------------------CCCCEEEEEEEchhheeEEEEEEe
Confidence 332 224678899999999999999964
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.94 E-value=3e-27 Score=218.26 Aligned_cols=245 Identities=17% Similarity=0.196 Sum_probs=180.2
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHH
Q 018323 12 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 91 (358)
Q Consensus 12 ~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 91 (358)
++..+|+++|+++||+|+|+ ++++ .|++++..+.. .. +..+.+|+..
T Consensus 51 ~~~~~la~~Aa~~al~~ag~--~~id-----~vi~~t~~~~~---------------------~~-----p~~a~~v~~~ 97 (331)
T 2x3e_A 51 LGSGDLALRAASAALASAGL--ERVD-----AVVLATSTGDF---------------------CC-----PATAPRVAAR 97 (331)
T ss_dssp CCHHHHHHHHHHHHHHHHTC--SCCS-----EEEEECSSCSE---------------------EE-----SCSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCc--ccCC-----EEEEEeCCCCC---------------------CC-----ChHHHHHHHH
Confidence 57889999999999999999 6776 88888865321 11 2357899999
Q ss_pred cCCC-CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCC
Q 018323 92 YGFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 170 (358)
Q Consensus 92 lgl~-gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 170 (358)
||++ +|+++++++|+|++.||..|+++|++|.+|.+||+|+|.++ +.. . |+.+.+
T Consensus 98 lgl~~~~~~~v~~aCas~~~Al~~A~~~i~~g~~~~vLv~g~e~~s-~~~----------~-------------~~d~~~ 153 (331)
T 2x3e_A 98 LGLVGALAFDLSAAATGFVYGLASVGSLISAGLADSALLVGVDTFS-HTL----------D-------------PADRST 153 (331)
T ss_dssp TTCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECGG-GGS----------C-------------TTCHHH
T ss_pred hCCCCCcEEEEcCcChHHHHHHHHHHHHHHcCCCCEEEEEEeeccc-cCC----------C-------------cccccc
Confidence 9998 79999999999999999999999999999999999999842 221 0 122346
Q ss_pred ceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCC---CCCCCC----------------CCh--------HHHH
Q 018323 171 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH---HITQPH----------------IDG--------KGAI 223 (358)
Q Consensus 171 g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~---~~~~~~----------------~~~--------~~~~ 223 (358)
++++||||+|+||++.+.+ .+..+++. ...+++. ....|. ..+ ..+.
T Consensus 154 ~~~~GdGA~A~vL~~~~~a--~~~~i~~~----~~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~ 227 (331)
T 2x3e_A 154 RALFGDGAGAVVLRAGDAE--EEGALLAF----DLGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMS 227 (331)
T ss_dssp HHHBCCEEEEEEEEEECTT--STTBEEEE----EEEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHH
T ss_pred ceeeccccEEEEEEecCCC--CCCceEEE----EEEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHH
Confidence 8899999999999976544 23344433 2223321 111111 012 4567
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHH
Q 018323 224 LAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIH 303 (358)
Q Consensus 224 ~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~ 303 (358)
++++++|+++|++++|||+|++|+++++..|. +.+.++... .+++. ....+||+.+|+..+.|.+++ +
T Consensus 228 ~~i~~aL~~agl~~~did~~~~H~~~~~~~d~-----~~~~lg~~~--~~~~~--~~~~~Gnt~sAs~~~~L~~~~---~ 295 (331)
T 2x3e_A 228 DSVRRVLDRVGWQASDLHHLVPHQANTRILAA-----VADQLDLPV--ERVVS--NIAEVGNTVAASIPLALAHGL---R 295 (331)
T ss_dssp HHHHHHHHHHTCCGGGCSEEEECCCCHHHHHH-----HHHHHTCCG--GGBCC--CHHHHCBCGGGHHHHHHHHHH---H
T ss_pred HHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHH-----HHHHcCCCH--HHHhh--hHhhhCcHHHHHHHHHHHHHH---H
Confidence 88999999999999999999999999998775 444555432 22332 346899999999888776553 3
Q ss_pred hCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 304 HGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 304 ~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
.+.+ .+.+.++..+||.|.+..+++|+-
T Consensus 296 ~~~~-------------------------~~G~~vll~~~G~G~~~~~~~l~~ 323 (331)
T 2x3e_A 296 QGIL-------------------------RDGGNMVLTGFGAGLTWGSVALRW 323 (331)
T ss_dssp TTCS-------------------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred hCCC-------------------------CCCCEEEEEEEeHHhhheeeEEEE
Confidence 3322 224788999999999999999864
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=99.94 E-value=9.7e-27 Score=215.25 Aligned_cols=250 Identities=20% Similarity=0.225 Sum_probs=178.6
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHH
Q 018323 11 IARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM 90 (358)
Q Consensus 11 ~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 90 (358)
.++..+|+++|+++||+|+|+++++++ +|++++..+++ . .+..+.+|+.
T Consensus 58 ~~~~~~la~~A~~~al~~ag~~~~~id-----~vi~~t~~~~~---------------------~-----~~~~a~~v~~ 106 (335)
T 1u6e_A 58 DESAASMATEACRRALSNAGLSAADID-----GVIVTTNTHFL---------------------Q-----TPPAAPMVAA 106 (335)
T ss_dssp TCCHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCCC---------------------S-----SSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCCC---------------------C-----CChHHHHHHH
Confidence 456889999999999999999998887 89999875321 1 1246789999
Q ss_pred HcCCC-CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCC
Q 018323 91 KYGFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 169 (358)
Q Consensus 91 ~lgl~-gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 169 (358)
.||++ +|+++++++|+|++.||..|+++|++|++|.+||+|+|.++.. ..|++ ..
T Consensus 107 ~lgl~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~-----------------------~~~~d-~~ 162 (335)
T 1u6e_A 107 SLGAKGILGFDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKLSPT-----------------------IDMYD-RG 162 (335)
T ss_dssp HHTCTTSEEEEEECGGGHHHHHHHHHHHHHHHTSCSSEEEEEEEECGGG-----------------------CCTTC-TT
T ss_pred HhCCCCCcEeeeccccHHHHHHHHHHHHHHHcCCCCEEEEEEEcccccc-----------------------cCccc-cc
Confidence 99998 5999999999999999999999999999999999999985321 12343 35
Q ss_pred CceeeecceEEEEeccHHHHHhcCCeeeEEEEe-eeeecCCCCCC--------CC-------CCCh--------HHHHHH
Q 018323 170 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRG-YGMSGDAHHIT--------QP-------HIDG--------KGAILA 225 (358)
Q Consensus 170 ~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g-~~~~~~~~~~~--------~~-------~~~~--------~~~~~~ 225 (358)
+++++||||+|+||++.+. .+ ++..+.+ .+...+..+.. .| ...+ ..+.++
T Consensus 163 ~~~~~gDGA~A~vl~~~~~---~~--i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 237 (335)
T 1u6e_A 163 NCFIFADGAAAVVVGETPF---QG--IGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDV 237 (335)
T ss_dssp TTTTBCEEEEEEEEEECSS---CC--BCCCEEEECGGGGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHH
T ss_pred cceEeccccEEEEEEecCC---CC--eeEEEEEEcCCcccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHH
Confidence 7899999999999987653 12 2223322 11111100000 00 0112 356778
Q ss_pred HHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhC
Q 018323 226 MTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHG 305 (358)
Q Consensus 226 ~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~ 305 (358)
++++|+++|++++|||++++|+++++..|. +.+.|+.... . .+...+..+||+.+|+..+.+..+ ++.+
T Consensus 238 i~~al~~agl~~~dId~~~~H~~~~~~~~~-----~~~~lg~~~~-~--~~~~~~~~~Gnt~sAs~~~~L~~~---~~~~ 306 (335)
T 1u6e_A 238 GRRAMDAAGVRPDQIDVFVPHQANSRINEL-----LVKNLQLRPD-A--VVANDIEHTGNTSAASIPLAMAEL---LTTG 306 (335)
T ss_dssp HHHHHHHHTCCGGGCCEEEECCSCHHHHHH-----HHHHHTCCTT-C--EECCTHHHHCBCGGGHHHHHHHHH---HHHT
T ss_pred HHHHHHHcCCCHHHCCEEEECCCCHHHHHH-----HHHHcCCCch-h--hhhhhhhhhCcHHHHHHHHHHHHH---HHcC
Confidence 999999999999999999999999987665 3445554321 1 222345789999999865433222 2222
Q ss_pred CCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 306 VAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 306 ~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
. ..+.+.+++++||+|++++++||+.
T Consensus 307 ~-------------------------~~~g~~~l~~~~G~G~t~~~~vl~~ 332 (335)
T 1u6e_A 307 A-------------------------AKPGDLALLIGYGAGLSYAAQVVRM 332 (335)
T ss_dssp S-------------------------SCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred C-------------------------CCCCCEEEEEEEehhheeEEEEEEe
Confidence 1 1224789999999999999999975
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=5.7e-27 Score=220.33 Aligned_cols=247 Identities=18% Similarity=0.160 Sum_probs=179.1
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHH
Q 018323 12 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 91 (358)
Q Consensus 12 ~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 91 (358)
++..+|+++|+++||+++|+++++++ .|++++..+ +. .+..+.+|+..
T Consensus 82 ~~~~~la~~Aa~~aL~~agl~~~~id-----~vi~~t~~~----------------------~~-----~p~~a~~v~~~ 129 (382)
T 1u0m_A 82 REAKSRVPAVIQRALDDAELLATDID-----VIIYVSCTG----------------------FM-----MPSLTAWLINE 129 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCS-----EEEEECSSS----------------------CC-----SSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHCC-----EEEEEecCC----------------------CC-----CCcHHHHHHHH
Confidence 45689999999999999999998887 788887641 11 12467899999
Q ss_pred cCCCC--Cceec-cCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCC
Q 018323 92 YGFQG--PNHAA-VTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 168 (358)
Q Consensus 92 lgl~g--p~~~v-~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~ 168 (358)
||+++ |++++ +++|+|++.||..|+++|++|.++.+||+|+|.++ +. ..|+|..
T Consensus 130 lGl~~~~~~~~v~~~aCss~~~Al~~A~~~i~~g~~~~vLv~g~e~~s-~~----------------------~~~~d~~ 186 (382)
T 1u0m_A 130 MGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCS-LC----------------------YQPTDLG 186 (382)
T ss_dssp TTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEGG-GG----------------------CCTTCCS
T ss_pred hCCCCCcceEEccCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEeccc-hh----------------------cCcccCC
Confidence 99998 88999 89999999999999999999999999999999742 21 1234433
Q ss_pred CC----ceeeecceEEEEeccHHHHHhcCCeeeEEEEeeee--ecCCCC----------------CCCCCCChHHHHHHH
Q 018323 169 RD----GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGM--SGDAHH----------------ITQPHIDGKGAILAM 226 (358)
Q Consensus 169 ~~----g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~--~~~~~~----------------~~~~~~~~~~~~~~~ 226 (358)
++ ++++||||+|+||++.+. ++ .+|.++.. ..++.. ...+......+. ++
T Consensus 187 ~~~~~~~~lfGDGA~A~vL~~~~~---~g----~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~-~i 258 (382)
T 1u0m_A 187 VGSLLCNGLFGDGIAAAVVRGRGG---TG----VRLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATMEPLAP-AL 258 (382)
T ss_dssp HHHHHHHHHBCEEEEEEEEETTTC---SE----EEEEEEEEEECSSCTTTEEEEEETTEEEEEECTTTGGGHHHHHH-HH
T ss_pred HHHhhccchhcCCcEEEEEeccCC---CC----cEEEEeeeEecCChHHhcCceecCCceEEEeCcHHHHHHHHHHH-HH
Confidence 33 899999999999987542 22 24444433 222221 011222235667 99
Q ss_pred HHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcce-ecccCCcCCcccchhHHHHHHHHHHHHhC
Q 018323 227 TRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAF-SSTKGAIGHLLGAAGAVEAIFAVLAIHHG 305 (358)
Q Consensus 227 ~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v-~~~k~~~Gh~~~asG~~~l~~~~~~l~~~ 305 (358)
+++|+++|++++|||+|++|+++++..|.+ .+.++... .+++. ...+..+||+.+|+..+.|.+++ +.+
T Consensus 259 ~~aL~~agl~~~dId~v~~H~~~~~i~d~~-----~~~lgl~~--~k~~~s~~~~~~~Gnt~sAsi~~~L~~~~---~~g 328 (382)
T 1u0m_A 259 KELAGEHGWDASDLDFYIVHAGGPRILDDL-----STFLEVDP--HAFRFSRATLTEYGNIASAVVLDALRRLF---DEG 328 (382)
T ss_dssp HHHHHTTSCCSSCCSCCEEECSHHHHHHHH-----HHHSCSCG--GGGHHHHHHHHHTCBCTTHHHHHHHHHHH---HSC
T ss_pred HHHHHHcCCCHHHCCEEEECCCCHHHHHHH-----HHHcCCCH--HHHHHHHHHHHHhCCchhhHHHHHHHHHH---Hhc
Confidence 999999999999999999999998876643 34444322 22332 24567899999999888776665 333
Q ss_pred CCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 306 VAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 306 ~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
.+ .+.+.+++.+||.|.+..+++|+-
T Consensus 329 ~~-------------------------~~Gd~vll~~~G~G~t~~~~vl~~ 354 (382)
T 1u0m_A 329 GV-------------------------EEGARGLLAGFGPGITAEMSLGCW 354 (382)
T ss_dssp CC-------------------------CSSCCCEEEEEETTTEEEEEEEEE
T ss_pred CC-------------------------CCCCEEEEEEEcccceeEEEEEEE
Confidence 21 123567788999999999988864
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-25 Score=210.41 Aligned_cols=254 Identities=17% Similarity=0.168 Sum_probs=179.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
+...|+.+|+++||+++|+++++++ .+++++..+ +. .+..+.+|+..|
T Consensus 112 ~~~~la~~Aa~~aL~~agl~~~~Id-----~vi~~t~~~----------------------~~-----~p~~a~~v~~~l 159 (393)
T 1ted_A 112 HAVPLAVDVSKRALAGLPYRAAEIG-----LLVLATSTG----------------------FI-----APGVDVAIVKEL 159 (393)
T ss_dssp HHHHHHHHHHHHHHTTCCCCGGGEE-----EEEEEESSC----------------------CC-----SSCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEEeCC----------------------Cc-----cChHHHHHHHHc
Confidence 5678999999999999999887776 677777542 11 124678999999
Q ss_pred CCCCC--ceec-cCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCC
Q 018323 93 GFQGP--NHAA-VTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 169 (358)
Q Consensus 93 gl~gp--~~~v-~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 169 (358)
|++++ .+.+ +++|+|++.||..|+++|++|.+|.|||+|+|.++.... |+.++
T Consensus 160 Gl~~~~~~~~v~~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s~~~~------------------------~~~~r 215 (393)
T 1ted_A 160 GLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNAV------------------------FADDI 215 (393)
T ss_dssp TCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGGGCC------------------------CCSSH
T ss_pred CcCCCcceeEeccchhHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccCC------------------------CCCCH
Confidence 99985 5777 899999999999999999999999999999998532110 22333
Q ss_pred C----ceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeee--cCCCCCC-------------C---CCCChHHHHHHHH
Q 018323 170 D----GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMS--GDAHHIT-------------Q---PHIDGKGAILAMT 227 (358)
Q Consensus 170 ~----g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~--~~~~~~~-------------~---~~~~~~~~~~~~~ 227 (358)
+ ++++||||+|+||++.+.+..++. .+++|.+++.. .++.... . +......+.++++
T Consensus 216 ~~~~~~~lfGDGA~A~vL~~~~~~~~~~~-~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~ 294 (393)
T 1ted_A 216 NDVVIHSLFGDGCAALVIGASQVQEKLEP-GKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVT 294 (393)
T ss_dssp HHHHHHHHBCEEEEEEEEEEECTTSCCCT-TCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHH
T ss_pred HHhhhhhhhcCccEEEEEecCCCccccCc-ceeeeeccceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHHH
Confidence 3 789999999999987654322222 44677776543 4442110 0 1111235677899
Q ss_pred HHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCccee-cccCCcCCcccchhHHHHHHHHHHHHhCC
Q 018323 228 RALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLAIHHGV 306 (358)
Q Consensus 228 ~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~-~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 306 (358)
++|+++|++++|||+|.+|.++++..|.++ +.++... .+++.+ .....+||+.+|+-.+.|.+++ +.+.
T Consensus 295 ~aL~~agl~~~dId~~~~H~~~~~i~d~~~-----~~lgl~~--~k~~~s~~~~~~~GNt~sAsi~~~L~~~~---~~g~ 364 (393)
T 1ted_A 295 EMLWDNGLQISDIDLWAIHPGGPKIIEQSV-----RSLGISA--ELAAQSWDVLARFGNMLSVSLIFVLETMV---QQAE 364 (393)
T ss_dssp HHHHHTTCCGGGCSCEEECCSCHHHHHHHH-----HHHTCCG--GGGHHHHHHHHHHCBCTHHHHHHHHHHHH---HSCS
T ss_pred HHHHHcCCCHhHCCEEEECCCcHHHHHHHH-----HHcCCCH--HHHHHHHHHHHhhCCchHhHHHHHHHHHH---hcCc
Confidence 999999999999999999999988766554 3344322 123321 3456789988888666554443 3322
Q ss_pred CCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 307 APLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 307 ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
+ .++.+.++..+||.|.+..+++|+..
T Consensus 365 ~------------------------~~~Gd~vll~~~G~G~t~~~~~l~~~ 391 (393)
T 1ted_A 365 S------------------------AKAISTGVAFAFGPGVTVEGMLFDII 391 (393)
T ss_dssp S------------------------SSSSEEEEEEEEETTTEEEEEEEEEC
T ss_pred c------------------------CCCCCeEEEEEeccchhhhhhheeec
Confidence 1 01347788899999999999999754
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.1e-25 Score=206.11 Aligned_cols=251 Identities=14% Similarity=0.095 Sum_probs=179.6
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHH
Q 018323 12 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 91 (358)
Q Consensus 12 ~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 91 (358)
++..+|+++|+++||+++|+++++++ .+++++..+ +. .+..+.+|+..
T Consensus 93 ~~~~~la~~Aa~~al~~ag~~~~~id-----~vi~~t~~~----------------------~~-----~p~~a~~v~~~ 140 (374)
T 2h84_A 93 KVVPDLAQQACLRALKDWGGDKGDIT-----HIVSVTSTG----------------------II-----IPDVNFKLIDL 140 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCC-----EEEEEESSC----------------------CC-----SSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeeCC----------------------CC-----CCcHHHHHHHH
Confidence 66789999999999999999998887 888887641 11 12467899999
Q ss_pred cCCCC--Cceecc-CCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCC
Q 018323 92 YGFQG--PNHAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 168 (358)
Q Consensus 92 lgl~g--p~~~v~-~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~ 168 (358)
||+++ |+++++ ++|+|++.||..|+++|++|.++.|||+|+|.++.... .|.+..
T Consensus 141 lGl~~~~~~~~v~~~aCss~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~~~----------------------~~~dr~ 198 (374)
T 2h84_A 141 LGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCSLHFS----------------------NTDGGD 198 (374)
T ss_dssp HTCCTTCEEEEEESCGGGHHHHHHHHHHHHHTTCTTCEEEEEEEECCGGGCC----------------------CSSSHH
T ss_pred cCcCCCCceEEecCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEEecchhhc----------------------CCCCHH
Confidence 99997 889997 89999999999999999999999999999998532110 111211
Q ss_pred --CCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecC--CCC------------C-CCCCC---ChHHHHHHHHH
Q 018323 169 --RDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGD--AHH------------I-TQPHI---DGKGAILAMTR 228 (358)
Q Consensus 169 --~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~--~~~------------~-~~~~~---~~~~~~~~~~~ 228 (358)
..++++||||+|+||++.+.+..++ ++ ++.+.+.... +.. . ..+.. ....+.+++++
T Consensus 199 ~~~~~~lfGDGA~A~vL~~~~~~~~~~--~~-~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~ 275 (374)
T 2h84_A 199 QMVASSIFADGSAAYIIGCNPRIEETP--LY-EVMCSINRSFPNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDT 275 (374)
T ss_dssp HHHHHHHBCCEEEEEEEESSCCTTCCC--CE-EEEEEEEEECSSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHH
T ss_pred HHhhhhhhccCcEEEEEecCCCcccCC--ce-eEEeeeeEEeCCCcccceeEEecCcEEEEeCchHHHHHHHHHHHHHHH
Confidence 2478999999999999876543222 33 5666543211 100 0 00000 12456778999
Q ss_pred HHHHcC------CCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCccee-cccCCcCCcccchhHHHHHHHHHH
Q 018323 229 ALKQSG------LQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLA 301 (358)
Q Consensus 229 al~~ag------l~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~-~~k~~~Gh~~~asG~~~l~~~~~~ 301 (358)
+|+++| ++++|||+| +|.++++..|.++ +.++... .+++++ .....+||+.+|+-.+.|.+++.
T Consensus 276 ~L~~ag~~~~~~l~~~did~~-~H~~~~~i~d~~~-----~~lgl~~--~k~~~s~~~~~~~Gnt~sasi~~~L~~~~~- 346 (374)
T 2h84_A 276 LLDKAKLQTSTAISAKDCEFL-IHTGGKSILMNIE-----NSLGIDP--KQTKNTWDVYHAYGNMSSASVIFVMDHARK- 346 (374)
T ss_dssp HHHHHTTTSCSCCCSSSSEEE-ECCCCHHHHHHHH-----HHTTCCG--GGGHHHHHHHHHHCBCTTHHHHHHHHHHHT-
T ss_pred HHHhcCCccccCCChhhcCEe-ECCCCHHHHHHHH-----HHcCCCH--HHHHHHHHHHHHhCCchhhHHHHHHHHHHh-
Confidence 999999 999999999 9999988766543 4444322 234432 44567999999887777666541
Q ss_pred HHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 302 IHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 302 l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
.+ + +.+.++..+||.|-+..+++|+.+
T Consensus 347 --~~-------------------------~--~Gd~vll~~~G~G~t~~~~ll~~~ 373 (374)
T 2h84_A 347 --SK-------------------------S--LPTYSISLAFGPGLAFEGCFLKNV 373 (374)
T ss_dssp --CS-------------------------C--CCSEEEEEEEETTTEEEEEEEEEC
T ss_pred --hc-------------------------C--CCCeEEEEEeccchhhhhhhheec
Confidence 11 1 246788889999999999999865
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.6e-23 Score=190.18 Aligned_cols=243 Identities=18% Similarity=0.240 Sum_probs=170.9
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHH
Q 018323 12 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 91 (358)
Q Consensus 12 ~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 91 (358)
.+...|+.+|+++||+++|+++++++ .|++++..++. ..+..+.+|+..
T Consensus 63 ~~~~~la~~Aa~~al~~ag~~~~~Id-----~vi~~t~~~~~--------------------------~~p~~a~~v~~~ 111 (333)
T 4dfe_A 63 VTTSDLAFIASQRAIEAADIDPQSID-----LIIVATSTPDF--------------------------VFPSTACLLQNK 111 (333)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSSCSS--------------------------SBSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCCC--------------------------CCCcHHHHHHHH
Confidence 35788999999999999999999998 89998865321 123467899999
Q ss_pred cCC--CCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCC
Q 018323 92 YGF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 169 (358)
Q Consensus 92 lgl--~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 169 (358)
||+ +.|+++++.+|+|++.||..|+++|++|.++.+||+++|.++.... |+.+.
T Consensus 112 lgl~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~------------------------~~d~~ 167 (333)
T 4dfe_A 112 LGIRNHGAAFDVQAVCSGFAYAVATADSFIRSGQHRTALVIGAETFSRILD------------------------FKDRT 167 (333)
T ss_dssp TTCCSCCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGCC------------------------TTCTT
T ss_pred hCCCCCCcEEEeCcccHHHHHHHHHHHHHHHcCCCCEEEEEEeeccccccC------------------------ccccc
Confidence 999 4699999999999999999999999999999999999998533211 22334
Q ss_pred CceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCC---CCCC--------------CCC--------hHHHHH
Q 018323 170 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH---ITQP--------------HID--------GKGAIL 224 (358)
Q Consensus 170 ~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~---~~~~--------------~~~--------~~~~~~ 224 (358)
.++++||||+|+||++.+. ..+ .++...+++.. ...| ... ...+.+
T Consensus 168 ~~~lfGDGA~A~vl~~~~~-----~~i----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~ 238 (333)
T 4dfe_A 168 TCVLFGDGAGAVILQASDE-----PGV----LASALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEK 238 (333)
T ss_dssp TTTTBCEEEEEEEEEEESS-----CSE----EEEEEEECGGGGGGEEBCEEEETTEEEECCSCEECHHHHHHHHHHHHHH
T ss_pred ceeeeccccEEEEEEEcCC-----CCe----EEEEEEEccCCcCeEEECCCCCCcccccCcceeeccHHHHHHHHHHHHH
Confidence 6788999999999997541 122 22222222210 0000 001 144567
Q ss_pred HHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHh
Q 018323 225 AMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHH 304 (358)
Q Consensus 225 ~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~ 304 (358)
+++++|+++|++++|||++.+|..+.+. ...+.+.++-.. .+++. ....+||+.+|+=.+.|.+++ +.
T Consensus 239 ~i~~~l~~~gl~~~did~~~~Hq~~~~i-----~~~~~~~lgl~~--~~~~~--~l~~~GNt~sasi~~~L~~~~---~~ 306 (333)
T 4dfe_A 239 VAVEALEKANLSAEQIDWLIPHQANIRI-----MQSTCRKLGLPQ--ERMIV--TVGEHGNTSAASIPLALDVAV---RD 306 (333)
T ss_dssp HHHHHHHHTTCCGGGCSEEEECCSCHHH-----HHHHHHHTTCCG--GGBCC--CHHHHCBCGGGHHHHHHHHHH---HT
T ss_pred HHHHHHHHcCCCHHHCCEEEEcCCCHHH-----HHHHHHHhCCCH--HHhhh--hHHhcCchHHHHHHHHHHHHH---Hc
Confidence 8899999999999999999999665443 334444444322 12222 344689999988666655443 33
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 305 GVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 305 ~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
+.+ .+.+..+..+||.|-+..+++|+
T Consensus 307 g~~-------------------------~~Gd~vll~~~G~G~t~~~~ll~ 332 (333)
T 4dfe_A 307 GRI-------------------------KRGQNVLIEGVGGGFTWGASVIR 332 (333)
T ss_dssp TCS-------------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred CCC-------------------------CCCCEEEEEEEchhheeEEEEEE
Confidence 332 22356777899999999988886
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=99.90 E-value=6.4e-23 Score=190.11 Aligned_cols=261 Identities=18% Similarity=0.110 Sum_probs=181.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+++|+++++++ .|++++.+.+. ..+..+.+|+..|
T Consensus 67 ~~~~La~~Aa~~al~~ag~~~~~Id-----~vi~~t~~~~~--------------------------~~p~~a~~v~~~l 115 (345)
T 3s21_A 67 QASDAATQAARKALIDANIGIEKIG-----LLINTSVSRDY--------------------------LEPSTASIVSGNL 115 (345)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCC-----EEEECCSCCSC--------------------------SSSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCCC--------------------------CCChHHHHHHHHh
Confidence 3678999999999999999999998 88888764211 1135678999999
Q ss_pred CCC--CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCC
Q 018323 93 GFQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 170 (358)
Q Consensus 93 gl~--gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 170 (358)
|++ .|+++++.+|+|++.||..|+++|++|.++.|||+|+|.++....+. + .+... +...+++|+....
T Consensus 116 Gl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~~~-~--~~~~~------~~~~~~~f~~~~~ 186 (345)
T 3s21_A 116 GVSDHCMTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETANLVYEKT-L--ERMTS------PDVTEEEFRNELA 186 (345)
T ss_dssp TCCTTCEEEECCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCHHHHHHH-H--HHHTC------TTCCHHHHHHHHG
T ss_pred CCCCCceEEeECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccchhhccc-c--ccccC------Cccchhhhhhhcc
Confidence 996 59999999999999999999999999999999999999975443221 1 11122 2345778888888
Q ss_pred ceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCC--CCC-----CCCh--------HHHHHHHHHHHHHcCC
Q 018323 171 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHI--TQP-----HIDG--------KGAILAMTRALKQSGL 235 (358)
Q Consensus 171 g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~--~~~-----~~~~--------~~~~~~~~~al~~agl 235 (358)
++++||||+|+||++.+... .+. .|.+....+++.+. ..+ ..++ ....++++++|+++|+
T Consensus 187 ~~~~GdGA~A~vl~~~~~~~-~~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl 261 (345)
T 3s21_A 187 ALTLGCGAAAMVMARSELVP-DAP----RYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLGW 261 (345)
T ss_dssp GGGBCCEEEEEEEEEGGGST-TSC----EEEEEEEEECGGGTTC-----------CHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred ceeeccceeEEEEecCCCCC-CCc----ceeeeccccCcchhhhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999765321 112 34444444443211 111 0111 1234677899999999
Q ss_pred CCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCC
Q 018323 236 QSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAK 315 (358)
Q Consensus 236 ~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~ 315 (358)
+++|||++.+|..+... ...+.+.++-.. .+++ ..-..+||+.+|+-.+.|.+++ +.+.+
T Consensus 262 ~~~did~~v~Hq~~~~i-----~~~~~~~lgl~~--ek~~--~~l~~~GNt~sasi~~~L~~~~---~~g~~-------- 321 (345)
T 3s21_A 262 AVEELDQFVIHQVSRPH-----TAAFVKSFGIDP--AKVM--TIFGEHGNIGPASVPIVLSKLK---ELGRL-------- 321 (345)
T ss_dssp CGGGCSEEEECCSCHHH-----HHHHHHHHTCCG--GGBC--CCHHHHCBCGGGHHHHHHHHHH---HHTCC--------
T ss_pred CHHHCCEEEeCCCCHHH-----HHHHHHHcCcCH--HHce--eeHhhcCchHHHHHHHHHHHHH---HcCCC--------
Confidence 99999999999655443 233444444322 1222 2224689999998777776554 33332
Q ss_pred CCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 316 PDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
.+.+..+..+||.|-+..+++|+
T Consensus 322 -----------------~~Gd~vll~~~G~G~t~~~~~l~ 344 (345)
T 3s21_A 322 -----------------KKGDRIALLGIGSGLNCSMAEVV 344 (345)
T ss_dssp -----------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred -----------------CCCCEEEEEEEChhhhheEEEEE
Confidence 12366888899999999888875
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=99.89 E-value=2e-23 Score=218.64 Aligned_cols=267 Identities=12% Similarity=0.066 Sum_probs=187.4
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHH
Q 018323 12 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 91 (358)
Q Consensus 12 ~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 91 (358)
+....|+++|+++||+|||+++++++ .++++++.+ + ..+..++.|+..
T Consensus 687 ~~~~~la~~Aa~~AL~~agl~~~dId-----~ii~~t~~~----------------------~-----~~p~~a~~v~~~ 734 (979)
T 3tsy_A 687 AEVPKLGKEAALKALKEWGQPKSKIT-----HLVFCTTSG----------------------V-----EMPGADYKLANL 734 (979)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCC-----EEEEEESSC----------------------C-----CSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHCC-----EEEEEeeCC----------------------C-----CCCcHHHHHHHH
Confidence 34667999999999999999999887 788887431 1 123678899999
Q ss_pred cCCCCC---ceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCC
Q 018323 92 YGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 168 (358)
Q Consensus 92 lgl~gp---~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~ 168 (358)
||++++ ++.++++|++++.||..|.++|++|.++.|||+|+|.....+. ......++..
T Consensus 735 lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~sG~~~~vLvvg~e~~~~~~~------------------~~~~~~~~~~ 796 (979)
T 3tsy_A 735 LGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTFR------------------GPSEDALDSL 796 (979)
T ss_dssp HTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECTTTTCC------------------CCCSSCHHHH
T ss_pred cCCCcccEEEeeeccccHhHHHHHHHHHHHHHhCCCCEEEEEEEEecchhee------------------CCCccCHHHH
Confidence 999974 4899999999999999999999999999999999997322110 0111222222
Q ss_pred CCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCC----------------ChHHHHHHHHHHHHH
Q 018323 169 RDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHI----------------DGKGAILAMTRALKQ 232 (358)
Q Consensus 169 ~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~----------------~~~~~~~~~~~al~~ 232 (358)
.+++++||||+|+||++.+.+..++..++....+.....+..+...+.. ......++++++|++
T Consensus 797 ~~~~lfGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~al~~ 876 (979)
T 3tsy_A 797 VGQALFGDGSAAVIVGSDPDISIERPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDP 876 (979)
T ss_dssp HHHHHBCCEEEEEEEESSCCSSSCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGG
T ss_pred hhhhhccCceEEEEEecCCCccccCcceEEEeeeeEEecCchhheEEEEecCceEEEEchHHHHHHHHHHHHHHHHHHhh
Confidence 3467899999999999877655556666666666555444333211110 012367889999999
Q ss_pred cCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCccee-cccCCcCCcccchhHHHHHHHHHHHHhCCCCCCC
Q 018323 233 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTL 311 (358)
Q Consensus 233 agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~-~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~ 311 (358)
+|++++|||++++|..+++..|.++ +.++-.. .++..+ ..-..+||+.+||=.+.|.++...++.|..
T Consensus 877 agl~~~did~~~~Hq~~~~i~~~~~-----~~lgl~~--~k~~~~~~~l~~~GNtssasi~~~L~~~~~~~~~G~~---- 945 (979)
T 3tsy_A 877 LGISDWNSLFWIAHPGGPAILDAVE-----AKLNLDK--KKLEATRHVLSEYGNMSSACVLFILDEMRKKSLKGER---- 945 (979)
T ss_dssp GTCCCGGGSEEEECCSCHHHHHHHH-----HHHTCCT--TTTHHHHHHHHHHCBCTTHHHHHHHHHHHHHHHHTTC----
T ss_pred cCCCCcccceEEECCCChHHHHHHH-----HHcCCCh--HHHHHHHHHHHHcCCcchhhHHHHHHHHHhhhccccc----
Confidence 9999999999999988877655443 3343221 122222 124567999999988888877665554321
Q ss_pred CCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 312 NLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
+. ........+..+||.|-+..+++|+-
T Consensus 946 -------------v~----~g~~~~~~ll~~~G~G~t~~~~~l~~ 973 (979)
T 3tsy_A 946 -------------AT----TGEGLDWGVLFGFGPGLTIETVVLHS 973 (979)
T ss_dssp -------------SB----TTTTCSEEEEEEECGGGEEEEEEEEC
T ss_pred -------------cc----CCCCcceeEEEEeCCchHHHHHHHHh
Confidence 00 11234667888999999999998874
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-20 Score=172.68 Aligned_cols=241 Identities=18% Similarity=0.176 Sum_probs=165.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+++|+++++++ .|++++.+++. ..+..+.+|+..+|
T Consensus 58 ~~~La~~Aa~~aL~~ag~~~~~Id-----~vi~~t~~~~~--------------------------~~p~~a~~v~~~lG 106 (323)
T 3il3_A 58 VATMGFEAAKNAIEAAQINPQDIE-----LIIVATTSHSH--------------------------AYPSAACQVQGLLN 106 (323)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGCC-----EEEEECSCCSC--------------------------SSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCCC--------------------------CCccHHHHHHHHhC
Confidence 678999999999999999999998 89998865321 11246789999999
Q ss_pred CCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCce
Q 018323 94 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 172 (358)
Q Consensus 94 l~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g~ 172 (358)
++. |++.++.+|+|++.||..|.++|++|.++.+||+++|.++.... +..+...+
T Consensus 107 l~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~------------------------~~d~~~~~ 162 (323)
T 3il3_A 107 IDDAISFDLAAACTGFVYALSVADQFIRAGKVKKALVIGSDLNSRKLD------------------------ETDRSTVV 162 (323)
T ss_dssp CSSCEEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGSCC------------------------TTCTTTTT
T ss_pred CCCccEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEEeeccccccC------------------------cccccccc
Confidence 974 89999999999999999999999999999999999998532210 11223567
Q ss_pred eeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCC---CCCC------------CCCh--------HHHHHHHHHH
Q 018323 173 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH---ITQP------------HIDG--------KGAILAMTRA 229 (358)
Q Consensus 173 ~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~---~~~~------------~~~~--------~~~~~~~~~a 229 (358)
++||||+|+||++.+ +..+ .++...+++.. ...| ...+ ....++++++
T Consensus 163 lfGDGA~A~vl~~~~-----~~~i----~~~~~~s~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~ 233 (323)
T 3il3_A 163 LFGDGAGAVILEASE-----QEGI----ISTHLHASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEET 233 (323)
T ss_dssp TBCEEEEEEEEEEES-----SCCE----EEEEEEECCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHHH
T ss_pred ccccceEEEEEEEcC-----CCCe----EEEEEEEcCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHHH
Confidence 899999999998754 1122 22222222211 0000 0011 2234678899
Q ss_pred HHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCC
Q 018323 230 LKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPL 309 (358)
Q Consensus 230 l~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp 309 (358)
|+++|++++|||++.+|-.+.. + ...+.+.++-.. .+++. .-..+||+.+|+=.+.|.+++ +.+.+
T Consensus 234 l~~~gl~~~did~~v~Hq~~~~----i-~~~~~~~lgl~~--ek~~~--~l~~~GNt~sasi~~~L~~~~---~~g~~-- 299 (323)
T 3il3_A 234 LLANNLDKKDLDWLVPHQANLR----I-ITATAKKLEMDM--SQVVV--TLDKYANNSAATVPVALDEAI---RDGRI-- 299 (323)
T ss_dssp HHTTTCCTTTCCEEEECCSCHH----H-HHHHHHHTTCCG--GGBCC--CHHHHCBCGGGHHHHHHHHHH---HTTSS--
T ss_pred HHHcCCCHHHCCEEEEcCCCHH----H-HHHHHHHcCcCH--HHhhc--cHhhcCchHHHHHHHHHHHHH---HcCCC--
Confidence 9999999999999999944322 2 334444444322 12222 233679999888766665543 33332
Q ss_pred CCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 310 TLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
.+.+..+..+||.|-+..++||+
T Consensus 300 -----------------------~~Gd~vll~~~G~G~t~~~~~l~ 322 (323)
T 3il3_A 300 -----------------------QRGQLLLLEAFGGGWTWGSALVR 322 (323)
T ss_dssp -----------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred -----------------------CCCCEEEEEEEehhheeEEEEEE
Confidence 22366788899999999998886
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.1e-20 Score=175.31 Aligned_cols=248 Identities=16% Similarity=0.150 Sum_probs=164.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+++|+++++++ .|++++.+.+. ..+..+.+|+..|
T Consensus 116 ~~~~La~~Aa~~AL~~agi~~~dId-----~vi~~t~t~~~--------------------------~~p~~a~~v~~~L 164 (392)
T 3led_A 116 ILAEMAVTAAEQAIERWGKPRERIG-----AVLCACSNMQR--------------------------AYPAMAIEVQNAL 164 (392)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGEE-----EEEEESSCCSC--------------------------SBSCHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCCC--------------------------CccHHHHHHHHHh
Confidence 3578999999999999999988887 78888765221 1234678999999
Q ss_pred CCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCce
Q 018323 93 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 172 (358)
Q Consensus 93 gl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g~ 172 (358)
|++.|+++|+.+|+|++.||..|.++|++|.++.|||+|+|.++.... |..+...+
T Consensus 165 Gl~~~~~dv~~aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~S~~~d------------------------~~dr~t~~ 220 (392)
T 3led_A 165 GLGGFAFDMNVACSSATFGLKTAADFVGGGSVDAVLMVNPEICSGHLN------------------------FRDRDSHF 220 (392)
T ss_dssp TCCSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGCC------------------------TTCTTTTT
T ss_pred CCCCeEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEeehhcCCcCC------------------------cCcccCCc
Confidence 998899999999999999999999999999999999999998532110 11223568
Q ss_pred eeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCC-C------C---CC----------CCCh--------HHHHH
Q 018323 173 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH-I------T---QP----------HIDG--------KGAIL 224 (358)
Q Consensus 173 ~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~-~------~---~~----------~~~~--------~~~~~ 224 (358)
++||||+|+||++.+... .+ ..|.+....+++.. . . .+ ..++ ..+.+
T Consensus 221 lFGDGA~A~vl~~~~~~~-~~----~~i~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~ 295 (392)
T 3led_A 221 IFGDVATAAIVERADDAQ-GG----WSILGTKLKTQFSNNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVSE 295 (392)
T ss_dssp TBCEEEEEEEEEEGGGCC-SS----EEEEEEEEEECCCSSEEBCCSGGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHHH
T ss_pred ccccccEEEEEEecCCCC-CC----CeEEEEEEEEccccccccCCCcccCCCccccccccceEEechHHHHHHHHHHHHH
Confidence 899999999998754210 11 23444333332210 0 0 00 0011 12345
Q ss_pred HHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHh
Q 018323 225 AMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHH 304 (358)
Q Consensus 225 ~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~ 304 (358)
.++++|+++|++++|||++.+|- .+-.+-....+++++......+. ...-..+||+.+|+=.+.|-+ + .
T Consensus 296 ~i~~~L~~~gl~~~dId~~v~Hq----an~~i~~~~~~~llgl~~~~~k~--~~~l~~~GNtssAsipl~L~~----~-~ 364 (392)
T 3led_A 296 MIIEHAREIGIDPHGLKRMWLHQ----ANINMNEIIGRKVLGRDPTRDEN--VIILDDYANTSSAGSIIAFHK----H-Q 364 (392)
T ss_dssp HHHHHHHHTTCCGGGCSEEEECS----SCHHHHHHHHHHHHTSCCCTTTB--CCCHHHHCBCGGGHHHHHHHH----C-C
T ss_pred HHHHHHHHcCCCHHHCcEEEEcC----CCHHHHHHHHHHhcCCCCCHHHH--HHHHhhhCccHHHHHHHHHHH----H-h
Confidence 78899999999999999999993 33333222223333421111112 122346799887764444322 1 1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 305 GVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 305 ~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
+. ..+.+.++..+||.|-+..+++|++
T Consensus 365 ~~-------------------------~~~Gd~vll~gfG~G~t~~~~ll~~ 391 (392)
T 3led_A 365 DD-------------------------MAQGDLGLICSFGAGYSAGTVFVQK 391 (392)
T ss_dssp TT-------------------------CCTTCEEEEEEEETTTEEEEEEEEE
T ss_pred CC-------------------------CCCCCEEEEEEEChhhEeEEEEEEE
Confidence 11 1223678888999999999999985
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-19 Score=169.02 Aligned_cols=248 Identities=13% Similarity=0.071 Sum_probs=164.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+++|+++++++ .|++++..++. ..+..+.+|+..+
T Consensus 79 ~~~~La~~Aa~~aL~~ag~~~~~Id-----~vi~~t~~~~~--------------------------~~p~~a~~v~~~l 127 (365)
T 3gwa_A 79 TAADLAYEAARKLFAQGAVGADQVD-----FVILCTQAPDY--------------------------VLPTSACMLQHRL 127 (365)
T ss_dssp CHHHHHHHHHHHHHHTTSCCGGGCC-----EEEEEESSCSC--------------------------SBSCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCCC--------------------------CCCcHHHHHHHHc
Confidence 3678999999999999999999998 88988765221 1234578999999
Q ss_pred CCC--CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCC
Q 018323 93 GFQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 170 (358)
Q Consensus 93 gl~--gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 170 (358)
|++ .|++.++.+|+|++.||..|.++|++|.++.|||+++|.++.... + ..+..
T Consensus 128 Gl~~~~~~~~v~~~C~s~~~Al~~A~~~i~~g~~~~vLvvg~e~~s~~~~-----------------~-------~dr~~ 183 (365)
T 3gwa_A 128 GIPTHAGALDVNLGCSGYVYGLSLAKGLVETGAARCVLLLTADTYSKYLH-----------------P-------LDKSV 183 (365)
T ss_dssp TCCTTSEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGSC-----------------T-------TCHHH
T ss_pred CCCCCceEEEecccChHHHHHHHHHHHHHHcCCCCEEEEEEEchhhccCC-----------------c-------ccccc
Confidence 998 489999999999999999999999999999999999998643221 0 01123
Q ss_pred ceeeecceEEEEeccHHHHHhcCCeeeEEEEe-eeee-------cCCCC-CCCC---------------C----CC----
Q 018323 171 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRG-YGMS-------GDAHH-ITQP---------------H----ID---- 218 (358)
Q Consensus 171 g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g-~~~~-------~~~~~-~~~~---------------~----~~---- 218 (358)
.+++||||+|+||++.+.. ...+.....+ .+.. ..+.. ...+ . .+
T Consensus 184 ~~lfGDGAaA~vl~~~~~~---~~~i~~~~~~s~g~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v 260 (365)
T 3gwa_A 184 RTLFGDGASATAVIAEHGE---LERIGPFVFGTDGRGAPNLIVKAGLFREPKSADSAREHEDASGNVRTDEHLYMNGAEV 260 (365)
T ss_dssp HTTBCCEEEEEEEEEECSS---SCSEEEEEEEECGGGGGGEEECSSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHH
T ss_pred cccccceeEEEEEEecCCC---CCceEEEEEEEcCCCCCeEEecCCCcCCCCcccccccccccccccccccceEeccHHH
Confidence 4679999999999875421 0112111111 1000 00000 0000 0 01
Q ss_pred ----hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHH
Q 018323 219 ----GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVE 294 (358)
Q Consensus 219 ----~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~ 294 (358)
.....++++++|+++|++++|||++.+|-.+.. + ...+.+.++-.. .+++ ..-..+||+.+|+=.+.
T Consensus 261 ~~~~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~----i-~~~~~~~Lgl~~--ek~~--~~l~~~GNtssAsipl~ 331 (365)
T 3gwa_A 261 MAFSLAEVPRAADRLLALAGEPRENIDCFVLHQANRF----M-LDALRKKMKIPE--HKFP--VLMEHCGNTVSSTLPLA 331 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHH----H-HHHHHHHHTCCG--GGSC--CCCTTTCBCGGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH----H-HHHHHHHhCCCH--HHHH--HHHhcccchHHHHHHHH
Confidence 123346788999999999999999999943322 2 344444444322 1222 23357899998876655
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 295 AIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 295 l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
|.++ ++.+.+ .+.+..+..+||.|-+..++||+
T Consensus 332 L~~~---~~~g~~-------------------------~~Gd~vll~~fG~G~t~~~~ll~ 364 (365)
T 3gwa_A 332 LETM---RANGTL-------------------------ARGMRLMLLGFGVGYSWAGCLVN 364 (365)
T ss_dssp HHHH---HHTTCC-------------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred HHHH---HHcCCC-------------------------CCCCEEEEEEEehhheeEEEEEE
Confidence 5443 333332 22467888899999999999886
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.7e-20 Score=171.20 Aligned_cols=247 Identities=11% Similarity=0.055 Sum_probs=165.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+++|+++++++ .|++++.+++. ..+..+.+|+..+|
T Consensus 66 ~~~La~~Aa~~aL~~agi~~~~Id-----~vi~~t~~~~~--------------------------~~p~~a~~v~~~lG 114 (354)
T 4efi_A 66 AGDLCRKAGEKLLAGLGWQADSID-----ALIFVSQTPNY--------------------------RLPATAFVLQAELD 114 (354)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSSCSC--------------------------SSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCCC--------------------------CCCcHHHHHHHHcC
Confidence 678999999999999999999998 89998865321 12346789999999
Q ss_pred CC--CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCc
Q 018323 94 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 171 (358)
Q Consensus 94 l~--gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g 171 (358)
++ .|.+.++.+|+|++.||..|.++|++|.++.|||+++|.++.... ++.+...
T Consensus 115 l~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~------------------------~~d~~~~ 170 (354)
T 4efi_A 115 LPASCLALDINLGCSGYPQALWLGMNLIQTGAAKRVLLAVGDTISKMID------------------------PTDRSTS 170 (354)
T ss_dssp CCTTSEEEEECCCTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGCC------------------------TTCHHHH
T ss_pred cCCCccEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhcccCC------------------------ccccccc
Confidence 94 589999999999999999999999999999999999998532211 1111235
Q ss_pred eeeecceEEEEeccHHHHHhcCCeeeEEEEeeeee-------cCCCCCC--------------CCCCCh--------HHH
Q 018323 172 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMS-------GDAHHIT--------------QPHIDG--------KGA 222 (358)
Q Consensus 172 ~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~-------~~~~~~~--------------~~~~~~--------~~~ 222 (358)
+++||||+|+||++.+. .......+...+.. ..+.... ....++ ...
T Consensus 171 ~lfGDGA~A~vl~~~~~----~~~~~~~~~s~g~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~ 246 (354)
T 4efi_A 171 LLFGDAGTMTALETSNG----DAAAHFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFNFTLNAV 246 (354)
T ss_dssp TTBCCEEEEEEEEECCS----CCEEEEEEEECGGGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHHHHHHHH
T ss_pred cccccceeEEEEeecCC----CCceEEEEEEcCCCcceEEecCCCCCCCccccccccccccccceEEccHHHHHHHHHHH
Confidence 67999999999987542 11111111111100 0000000 000011 234
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHH
Q 018323 223 ILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAI 302 (358)
Q Consensus 223 ~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l 302 (358)
.++++++|+++|++++|||++.+|-.+.. + ...+.+.++-.. .+++ ..-..+||+.+|+=.+.|.+++.
T Consensus 247 ~~~i~~~l~~~gl~~~did~~v~Hq~~~~----i-~~~~~~~Lgl~~--ek~~--~~l~~~GNt~sasi~~~L~~~~~-- 315 (354)
T 4efi_A 247 PKLVSRTLDIAGRDKDSYDAFLFHQANLF----M-LKHLAKKAGLPA--ERVP--VNIGEYGNTSCASIPLLITTELK-- 315 (354)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCCCHH----H-HHHHHHHTTCCG--GGSC--CCHHHHCBCGGGHHHHHHHHHSH--
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCCCCHH----H-HHHHHHHhCcCH--HHHH--HHHhhhCcHHHHHHHHHHHHHHH--
Confidence 46788999999999999999999944322 2 334444444322 1222 12357899998887766665543
Q ss_pred HhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 303 HHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 303 ~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
.+.+ .+.+..+..+||.|-+..+++|+-
T Consensus 316 -~g~~-------------------------~~Gd~vll~~fG~G~t~~~~ll~~ 343 (354)
T 4efi_A 316 -DRLK-------------------------EETLQLGMFGFGVGYSWASAALAV 343 (354)
T ss_dssp -HHHH-------------------------HSCEEEEEEEEETTTEEEEEEEEE
T ss_pred -hCCC-------------------------CCCCEEEEEEEchhhhheeeEEEE
Confidence 2221 123567888999999999999874
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.1e-19 Score=168.92 Aligned_cols=245 Identities=16% Similarity=0.147 Sum_probs=164.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+++|+++++++ .|++++..++. ..+..+.+|+..+
T Consensus 73 ~~~~La~~Aa~~aL~~agl~~~dId-----~vi~~t~~~~~--------------------------~~p~~a~~v~~~l 121 (359)
T 3h78_A 73 AVSALMVPAARQAIEAAGLLPEDID-----LLLVNTLSPDH--------------------------HDPSQACLIQPLL 121 (359)
T ss_dssp CTHHHHHHHHHHHHHHTTCCGGGCC-----EEEEECSSCSS--------------------------SBSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcCCCHHHCC-----EEEEEeCCCCC--------------------------CCCcHHHHHHHHc
Confidence 3578999999999999999999998 89998865221 1124678999999
Q ss_pred CCCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCc
Q 018323 93 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 171 (358)
Q Consensus 93 gl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g 171 (358)
|++. |.+.++.+|+|++.||..|.++|++|.++.|||+++|.++.... +.+. .+...
T Consensus 122 Gl~~~~~~~v~~aC~s~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~~~~-----------------~~d~-----~~~t~ 179 (359)
T 3h78_A 122 GLRHIPVLDIRAQASGLLYGLQMARGQILAGLARHVLVVCGEVLSKRMD-----------------CSDR-----GRNLS 179 (359)
T ss_dssp TCCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEECGGGCC-----------------CSTT-----THHHH
T ss_pred CCCCCcEEEECCHhHHHHHHHHHHHHHHHCCCcCEEEEEEEchhcccCC-----------------cccc-----ccccc
Confidence 9985 89999999999999999999999999999999999998533211 0000 01234
Q ss_pred eeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCC-----------CCCCC--------------CCCh-------
Q 018323 172 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH-----------HITQP--------------HIDG------- 219 (358)
Q Consensus 172 ~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~-----------~~~~~--------------~~~~------- 219 (358)
+++||||+|+||++.+. .+..++ ++...+++. ....+ ...+
T Consensus 180 ~lfGDGAaA~vl~~~~~---~~~~i~----~~~~~s~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~ 252 (359)
T 3h78_A 180 ILLGDGAGAVVVSAGES---LEDGLL----DLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHA 252 (359)
T ss_dssp TTBCEEEEEEEEECCSC---SSSEEE----EEEEEECGGGGGGEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHH
T ss_pred ceecceeEEEEEEecCC---CCCceE----EEEEEEccCccceEEeCCCCCccCCccccccccccCCceEeccHHHHHHH
Confidence 67999999999987432 122232 222222111 00000 0011
Q ss_pred -HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHH
Q 018323 220 -KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 298 (358)
Q Consensus 220 -~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~ 298 (358)
..+.++++++|+++|++++|||++.+|-.+ -.+ ...+.+.++-.. .+++. .-..+||+.+|+=.+.|.++
T Consensus 253 ~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n----~~i-~~~~~~~lgl~~--ek~~~--~l~~~GNt~sAsi~l~L~~~ 323 (359)
T 3h78_A 253 SQTLVRIAGEMLAAHELTLDDIDHVICHQPN----LRI-LDAVQEQLGIPQ--HKFAV--TVDRLGNMASASTPVTLAMF 323 (359)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCSEEEECCSC----HHH-HHHHHHHHTCCG--GGBCC--CHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHH-HHHHHHHhCcCH--HHhhh--hhhcccchHHHHHHHHHHHH
Confidence 224467889999999999999999999443 222 334444444322 12222 23467999988866666554
Q ss_pred HHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 299 VLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 299 ~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
+.. + .+.+..+..+||.|-+..+++|+-
T Consensus 324 ~~~-----l-------------------------~~Gd~vll~~fG~G~t~~~~ll~~ 351 (359)
T 3h78_A 324 WPD-----I-------------------------QPGQRVLVLTYGSGATWGAALYRK 351 (359)
T ss_dssp GGG-----S-------------------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred HHh-----C-------------------------CCCCEEEEEEEchhhhheeeeEEe
Confidence 321 1 123567778999999999998873
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.8e-19 Score=166.04 Aligned_cols=246 Identities=17% Similarity=0.087 Sum_probs=165.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+++|+++++++ .|++++.... .| ... .++.+|+..+
T Consensus 53 ~~~~La~~Aa~~aL~~ag~~~~dId-----~vi~~t~~~~-------------------~~----d~~--~~a~~v~~~l 102 (357)
T 3s3l_A 53 APPRMAARAARAALGRGDVDPADVS-----LVLHSSLWFQ-------------------GI----DLW--PAASYVAHEA 102 (357)
T ss_dssp SHHHHHHHHHHHHHHHTTCCGGGEE-----EEEEECSSCC-------------------SS----SSS--CHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCC-------------------Cc----ccc--cHHHHHHHHh
Confidence 4678999999999999999988887 7888875300 01 111 2477899999
Q ss_pred CCCC-CceeccCCchhHHHHHHHHHHHHHcCCCC--EEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCC
Q 018323 93 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSD--VMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 169 (358)
Q Consensus 93 gl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d--~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 169 (358)
|++. |.+.|+.+|+|++.||..|.++|++|.++ .|||+++|.++.+. ..+|+. +
T Consensus 103 G~~~~~~~~v~~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~~~----------------------~~~~~~-~ 159 (357)
T 3s3l_A 103 VGRHVPAFGLAQRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAGPR----------------------IDRWNS-V 159 (357)
T ss_dssp TCSSSCEEEEECGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCTTT----------------------CCTTTS-S
T ss_pred CCCCCcEEEEcCccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEecccccc----------------------cccccc-c
Confidence 9975 89999999999999999999999999999 99999999864221 011222 2
Q ss_pred CceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCC--------CCCC-------CCC----------------
Q 018323 170 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH--------ITQP-------HID---------------- 218 (358)
Q Consensus 170 ~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~--------~~~~-------~~~---------------- 218 (358)
..+++||||+|+||++.+. + ..|.++...+++.. ...| ...
T Consensus 160 ~~~lfGDGA~A~vl~~~~~----~----~~i~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~ 231 (357)
T 3s3l_A 160 DVTMYGDGAAALVLSTRDG----F----ARVLSTATGVDNSLEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLPD 231 (357)
T ss_dssp SSCCBCCEEEEEEEESSCC----S----EEEEEEEEEECGGGGGGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCTT
T ss_pred CCcccccccEEEEEecCCC----C----CeEEEEEEEEccChhhhcccCCCCCCCccCcCCccccccchhhhhcccchhh
Confidence 5788999999999987431 1 13444444333321 0000 000
Q ss_pred -----hHHHHHHHHHHHHHcCCCCCCccEEEe-cCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhH
Q 018323 219 -----GKGAILAMTRALKQSGLQSHQVDYVNA-HATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 292 (358)
Q Consensus 219 -----~~~~~~~~~~al~~agl~~~did~i~~-h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~ 292 (358)
.....++++++|+++|++++|||++.+ |-.... .+.+ .+.++-.. .++.. .....+||+.+|+-.
T Consensus 232 ~~~~~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~-~~~~-----~~~lgl~~--ek~~~-~~~~~~GNt~aAsip 302 (357)
T 3s3l_A 232 LTHRYIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGT-GHEL-----HDLLGLPD--ERTSW-AYGRTTGHVGAGDQY 302 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCS-SCCH-----HHHHTSCG--GGBTH-HHHHHHCBCTTCHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH-HHHH-----HHHcCCCH--HHhHH-HhccccccchHhHHH
Confidence 013445788999999999999999996 855544 3332 33343322 12222 222357999888866
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 293 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 293 ~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
+.|.+++ +.+.+ .+.+.++..+||.|-+..+++|+-
T Consensus 303 l~L~~~~---~~g~l-------------------------~~Gd~vll~~fG~G~t~~a~ll~~ 338 (357)
T 3s3l_A 303 AGLAHLV---ENALV-------------------------QPGDRVLLFGGGAGYTCTAAVVEI 338 (357)
T ss_dssp HHHHHHH---HTTCC-------------------------CTTCEEEEECCBTTTEEEEEEEEE
T ss_pred HHHHHHH---HcCCC-------------------------CCCCEEEEEEEchhhhheeeeEEe
Confidence 6665544 33332 223678888999999888888874
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=99.81 E-value=3.6e-20 Score=175.36 Aligned_cols=263 Identities=12% Similarity=0.065 Sum_probs=176.2
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHH
Q 018323 12 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 91 (358)
Q Consensus 12 ~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 91 (358)
+....|+.+|+++||+++|+++++++ .+++++..+ + ..+..+.+|+..
T Consensus 123 ~~~~~La~~Aa~~AL~~agl~~~~Id-----~li~~t~~~----------------------~-----~~p~~a~~v~~~ 170 (413)
T 1xes_A 123 MEVPRLAKEAAEKAIQEWGQSKSGIT-----HLIFCSTTT----------------------P-----DLPGADFEVAKL 170 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCC-----EEEEEESCC----------------------C-----EESCHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEEeCC----------------------C-----ccchHHHHHHHH
Confidence 46778999999999999999998887 888888642 1 123457899999
Q ss_pred cCCCCC---ceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCC
Q 018323 92 YGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 168 (358)
Q Consensus 92 lgl~gp---~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~ 168 (358)
||++++ .++++.+|+|++.||..|.++|++|.++.|||+|+|.++..+. . +. .++|+..
T Consensus 171 lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~~G~~~~vLvvg~E~~s~~~~----------~------~~--d~~~~~~ 232 (413)
T 1xes_A 171 LGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFR----------G------PS--ETHLDSL 232 (413)
T ss_dssp HTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCCEEEEEEECTTTTCC----------C------CC--TTCHHHH
T ss_pred cCcCCccchhceecCccHHHHHHHHHHHHHHHcCCCCEEEEEEehhhhhhhc----------C------CC--ccchhhc
Confidence 999874 7889999999999999999999999999999999998533110 0 11 1345555
Q ss_pred CCceeeecceEEEEeccHHHHHhcC-CeeeEEEEeeeeecCCC--CC------------C-CCC---CChHHHHHHHHHH
Q 018323 169 RDGFVIGEGSGVLVLEELEHAKKRG-AKIYAEVRGYGMSGDAH--HI------------T-QPH---IDGKGAILAMTRA 229 (358)
Q Consensus 169 ~~g~~~geGaaa~vL~~~~~A~~~g-~~~~a~i~g~~~~~~~~--~~------------~-~~~---~~~~~~~~~~~~a 229 (358)
..++++||||+|+||++.+.. + .....++.+.+....+. .. . .+. .....+.++++++
T Consensus 233 ~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~ 309 (413)
T 1xes_A 233 VGQALFGDGASALIVGADPIP---QVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEA 309 (413)
T ss_dssp HHHHHBCCEEEEEEEESSCCT---TTSCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHH
T ss_pred ccceeEecccEEEEEecCCCc---cccCCceEEEeeeeEEcCCChhhcCcEEecCceEEEecccHHHHHHHHHHHHHHHH
Confidence 678999999999999875421 1 11112444433211110 00 0 000 0123455688899
Q ss_pred HHHcCCC-CCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCccee-cccCCcCCcccchhHHHHHHHHHHHH-hCC
Q 018323 230 LKQSGLQ-SHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLAIH-HGV 306 (358)
Q Consensus 230 l~~agl~-~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~-~~k~~~Gh~~~asG~~~l~~~~~~l~-~~~ 306 (358)
|+++|++ .+|| ++.+|-.+... ...+.+.++-.. .++..+ .....+||+.+|+-.+.|.+++..-+ .|.
T Consensus 310 L~~~gl~d~~di-~~v~Hq~~~~i-----~~~~~~~Lgl~~--ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~G~ 381 (413)
T 1xes_A 310 FSQFKISDWNKL-FWVVHPGGRAI-----LDRVEAKLNLDP--TKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGC 381 (413)
T ss_dssp HGGGTCCCGGGS-EEEECCSCHHH-----HHHHHHHTTCCT--TTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTC
T ss_pred HHhcCCCCccce-eEEECCCCHHH-----HHHHHHHcCCCh--HHhHHHHHHHHhcCcCchhhHHHHHHHHHHhccccCC
Confidence 9999998 8888 89999554332 233444454322 233332 34467899999998888777764421 111
Q ss_pred CCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 307 APLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 307 ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
+.| ......++..+||.|-+..+++|+..
T Consensus 382 ~~~----------------------G~~~d~vll~~fG~G~t~~~~ll~~~ 410 (413)
T 1xes_A 382 STT----------------------GEGLEMGVLFGFGPGLTIETVVLKSV 410 (413)
T ss_dssp SBT----------------------TTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred CCC----------------------CCCcceEEEEEecCCcEEeEEEEEec
Confidence 100 00126788889999999999998764
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-19 Score=169.60 Aligned_cols=263 Identities=11% Similarity=0.049 Sum_probs=173.3
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHH
Q 018323 12 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 91 (358)
Q Consensus 12 ~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 91 (358)
.....|+.+|+++||+++|+++++++ .+++++.++. ..+..+.+|+..
T Consensus 96 ~~~~~La~~Aa~~aL~~ag~~~~~Id-----~li~~t~~~~---------------------------~~p~~a~~v~~~ 143 (387)
T 3a5r_A 96 KGVAELGKEAALKAIKEWGQPKSKIT-----HLIVCCLAGV---------------------------DMPGADYQLTKL 143 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCC-----EEEEEESSCC---------------------------EESCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCC---------------------------CCCcHHHHHHHH
Confidence 45678999999999999999998887 8888876421 123467899999
Q ss_pred cCCCCC---ceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCC
Q 018323 92 YGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 168 (358)
Q Consensus 92 lgl~gp---~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~ 168 (358)
||++++ .++++.+|+|++.||..|.++|++|.++.|||+++|.++..+. . +.+ ..++..
T Consensus 144 lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~----------~------~~d--~~~~~~ 205 (387)
T 3a5r_A 144 LDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTTCFR----------G------PSE--THLDSM 205 (387)
T ss_dssp TTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECCTTTCC----------C------CCS--SCCSST
T ss_pred cCcCCCcceeeeEccccHHHHHHHHHHHHHHHhCCCCEEEEEEEeccchhhc----------C------CCc--cchhhc
Confidence 999875 7889999999999999999999999999999999998532110 0 110 011223
Q ss_pred CCceeeecceEEEEeccHHHHHhcC-CeeeEEEEeeeeecCCCC--C------------C-CCCC---ChHHHHHHHHHH
Q 018323 169 RDGFVIGEGSGVLVLEELEHAKKRG-AKIYAEVRGYGMSGDAHH--I------------T-QPHI---DGKGAILAMTRA 229 (358)
Q Consensus 169 ~~g~~~geGaaa~vL~~~~~A~~~g-~~~~a~i~g~~~~~~~~~--~------------~-~~~~---~~~~~~~~~~~a 229 (358)
..++++||||+|+||++.+.. + .....++.+.+....+.. . . .+.. ....+.++++++
T Consensus 206 ~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~ 282 (387)
T 3a5r_A 206 IGQAILGDGAAAVIVGADPDL---TVERPIFELVSTAQTIVPESHGAIEGHLLESGLSFHLYKTVPTLISNNIKTCLSDA 282 (387)
T ss_dssp THHHHBCCEEEEEEEESSCCT---TTCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHH
T ss_pred cccceeccceeEEEEecCCCc---cccCCceEEEeeeEEEeCCChHhcCceEcCCCeEEEecchHHHHHHHHHHHHHHHH
Confidence 467899999999999875421 1 111124444332211110 0 0 0000 123345688899
Q ss_pred HHHcCCC-CCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCccee-cccCCcCCcccchhHHHHHHHHHHH-HhCC
Q 018323 230 LKQSGLQ-SHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLAI-HHGV 306 (358)
Q Consensus 230 l~~agl~-~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~-~~k~~~Gh~~~asG~~~l~~~~~~l-~~~~ 306 (358)
|+++|++ .+|| ++.+|-.+... ...+.+.++... .++..+ .....+||+.+|+-.+.|.+++..= +.|.
T Consensus 283 L~~~gl~d~~di-~~v~Hq~~~~i-----~~~~~~~lgl~~--ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~G~ 354 (387)
T 3a5r_A 283 FTPLNISDWNSL-FWIAHPGGPAI-----LDQVTAKVGLEK--EKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSLENGQ 354 (387)
T ss_dssp HGGGTCCCGGGS-EEEECCSCHHH-----HHHHHHHHTCCG--GGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTC
T ss_pred HHhcCCCChhhe-eEEECCCCHHH-----HHHHHHHcCCCh--HHhHHHHHHHHhcCCcchhHHHHHHHHHHHhccccCC
Confidence 9999998 8889 89999654433 223344444321 223332 3456799999999888877766432 1111
Q ss_pred CCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 307 APLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 307 ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
+.| ......++..+||.|-+..+++|+..
T Consensus 355 ~~~----------------------G~~~d~vll~~fG~G~t~~~~ll~~~ 383 (387)
T 3a5r_A 355 ATT----------------------GEGLEWGVLFGFGPGITVETVVLRSV 383 (387)
T ss_dssp SBT----------------------TTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred CCC----------------------CCCcceEEEEEecCcceeeehhheec
Confidence 100 00126788889999999888888753
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=5.1e-20 Score=173.47 Aligned_cols=246 Identities=14% Similarity=0.066 Sum_probs=163.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
+...|++.|+++||++ +++++++ .+++++.++.. ..+..+..|+..|
T Consensus 50 ~~~~la~~Aa~~aL~~--~~~~~Id-----~li~~t~~~~~--------------------------~~p~~a~~v~~~l 96 (396)
T 1xpm_A 50 DIVSMGANAAKDIITD--EDKKKIG-----MVIVATESAVD--------------------------AAKAAAVQIHNLL 96 (396)
T ss_dssp CHHHHHHHHHHTTCCH--HHHHHEE-----EEEEECSSCSB--------------------------SSSCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhc--CCHHHCC-----EEEEEeCCCCC--------------------------CCCCHHHHHHHHh
Confidence 4678999999999988 5554443 46667754211 1124678999999
Q ss_pred CCCC--CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCC
Q 018323 93 GFQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 170 (358)
Q Consensus 93 gl~g--p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 170 (358)
|+++ ++++++++|+|++.||..|.++|++|.++.|||+|+|.. ... ++ ..+
T Consensus 97 Gl~~~~~~~~v~~aC~sg~~Al~~A~~~I~sg~~~~vLvvg~e~s-~~~-------------------------~~-~~~ 149 (396)
T 1xpm_A 97 GIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDTA-RYG-------------------------LN-SGG 149 (396)
T ss_dssp TCCSSCEEEEEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEEE-CCC-------------------------TT-CSS
T ss_pred CCCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCEEEEEeehhh-ccc-------------------------cC-CCC
Confidence 9974 899999999999999999999999999999999999962 110 11 136
Q ss_pred ceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeec-CCCCCCCCCC------ChHH--------HHHHHHHHHHHcCC
Q 018323 171 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSG-DAHHITQPHI------DGKG--------AILAMTRALKQSGL 235 (358)
Q Consensus 171 g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~-~~~~~~~~~~------~~~~--------~~~~~~~al~~agl 235 (358)
++++||||+|+||++.+ .++....+.+... +..+...|.. ++.. ..++++++|+++|+
T Consensus 150 ~~~~GdGA~A~vl~~~~-------~i~~~~~~~g~~~~d~~~~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl 222 (396)
T 1xpm_A 150 EPTQGAGAVAMVIAHNP-------SILALNEDAVAYTEDVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGK 222 (396)
T ss_dssp GGGCEEEEEEEEEEESC-------SSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CcccccceEEEEeccCC-------ceEEEEeccccccceEEEeeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88999999999998631 3444444433322 3222222221 3333 56789999999999
Q ss_pred CCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCc-----ceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCC
Q 018323 236 QSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSL-----AFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLT 310 (358)
Q Consensus 236 ~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~-----~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~ 310 (358)
+++|||++.+|.++++..|.+....+....+... ..+ |-......+||+.+||-.+.|..++. ++.+
T Consensus 223 ~~~did~~~~H~~~~~~~~~~~~~l~~~~~~~~~--e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~---~~~l--- 294 (396)
T 1xpm_A 223 SLADFASLCFHVPFTKMGKKALESIIDNADETTQ--ERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLE---NRDL--- 294 (396)
T ss_dssp CGGGCSEEEECCSSHHHHHHHHHTTGGGSCHHHH--HHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHH---HSCC---
T ss_pred CHHHCCEEEecCCchHHHHHHHHHHHhhcccCCH--HHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHHH---cCCC---
Confidence 9999999999999988777654222110000000 000 11122357899999988777776653 2322
Q ss_pred CCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 311 LNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
.+.+.++..+||.|-+...++++
T Consensus 295 ----------------------~~Gd~ill~s~GsG~~~~~~~~~ 317 (396)
T 1xpm_A 295 ----------------------QAGETIGLFSYGSGSVGEFYSAT 317 (396)
T ss_dssp ----------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred ----------------------CCCCEEEEEEECcchhheEEEEE
Confidence 12356777899977655555554
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.2e-18 Score=156.77 Aligned_cols=242 Identities=17% Similarity=0.161 Sum_probs=158.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+++|+++++++ .+++++.+.+. ..+..+.+|+..+|
T Consensus 52 ~~~La~~Aa~~aL~~ag~~~~~Id-----~li~~t~~~~~--------------------------~~p~~a~~v~~~lG 100 (321)
T 3il6_A 52 TSDLCHQVAKQLLEKSGKQASEID-----FILVATVTPDF--------------------------NMPSVACQVQGAIG 100 (321)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSSCSC--------------------------SSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCCc--------------------------CCCcHHHHHHHHcC
Confidence 788999999999999999999888 89998865221 12346789999999
Q ss_pred CCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCce
Q 018323 94 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 172 (358)
Q Consensus 94 l~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g~ 172 (358)
++. |.+.++.+|+|++.||..|+++|++|.++.+||+++|.++.... +..+...+
T Consensus 101 l~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~------------------------~~dr~~~~ 156 (321)
T 3il6_A 101 ATEAFAFDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSKMLD------------------------WTDRSTAV 156 (321)
T ss_dssp CTTCEEEEECCGGGHHHHHHHHHHHHHHTSSCCCEEEEEEECGGGGSC------------------------TTCTTTGG
T ss_pred CCCceEEEeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEEccccccCC------------------------ccccccce
Confidence 984 89999999999999999999999999999999999998532110 12223567
Q ss_pred eeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCC------------CC--CCC--------CCCChHH----HHHHH
Q 018323 173 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDA------------HH--ITQ--------PHIDGKG----AILAM 226 (358)
Q Consensus 173 ~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~------------~~--~~~--------~~~~~~~----~~~~~ 226 (358)
++||||+|+||++.+. + .++. +...+++ .. ... ...++.. ..+.+
T Consensus 157 lfGDGA~A~vl~~~~~----~-~i~~----~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~ 227 (321)
T 3il6_A 157 LFGDGAAGVLIEAAET----P-HFLN----EKLQADGQRWTALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDV 227 (321)
T ss_dssp GBCCEEEEEEEEEESS----C-CEEE----EEEEECGGGGGGEECCCCCCCSTTCCCCCCCCCSCEECHHHHHHHHHHHH
T ss_pred eeccccEEEEEEEcCC----C-CEEE----EEEEEcCCCCCeEEeCCCCCCCCCCccccccccceeechHHHHHHHHHHH
Confidence 8999999999987542 1 2222 1111111 00 000 0001111 12233
Q ss_pred HHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCC
Q 018323 227 TRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 306 (358)
Q Consensus 227 ~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 306 (358)
.++++++ +.++|||++.+|-.+ -.+ ...+.+.++-.. .+++ ..-..+||+.+|+=.+.|.+++ +.+.
T Consensus 228 ~~~i~~~-l~~~did~~v~Hq~~----~~i-~~~~~~~lgl~~--ek~~--~~l~~~GNt~sasi~~~L~~~~---~~g~ 294 (321)
T 3il6_A 228 SQNILSL-VTDETVDYLLLHQAN----VRI-IDKIARKTKISR--EKFL--TNMDKYGNTSAASIPILLDEAV---ENGT 294 (321)
T ss_dssp HHHHHTT-CCGGGCSEEEECCSC----HHH-HHHHHHHHTCCG--GGBC--CCGGGTCBCGGGHHHHHHHHHH---HTTS
T ss_pred HHHHHHH-cCcccCCEEEEcCCC----HHH-HHHHHHHcCcCH--HHhh--hhHhhcccHHHHHHHHHHHHHH---HhCC
Confidence 3444443 338999999999433 222 344444454332 1222 2346789999888666655443 3433
Q ss_pred CCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 307 APLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 307 ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
+.| ...+..+..+||.|-+..++||+
T Consensus 295 ~~~-----------------------G~~d~vll~~fG~G~t~~~~~l~ 320 (321)
T 3il6_A 295 LIL-----------------------GSQQRVVLTGFGGGLTWGSLLLT 320 (321)
T ss_dssp SCT-----------------------TSCCEEEEEEEETTTEEEEEEEE
T ss_pred CCC-----------------------CCCCEEEEEEEehhheeEEEEEE
Confidence 211 11267888899999999999886
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.9e-19 Score=164.45 Aligned_cols=246 Identities=20% Similarity=0.231 Sum_probs=161.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+++|+++++|+ .+++++.++++ ..+..+..|+..||
T Consensus 62 ~~~la~~Aa~~aL~~ag~~~~dId-----~li~~t~t~~~--------------------------~~P~~a~~v~~~LG 110 (350)
T 4ewp_A 62 VPVMAVGAAREALERAGLQGSDLD-----AVIVSTVTFPH--------------------------ATPSAAALVAHEIG 110 (350)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCS-----EEEEECSCCSC--------------------------SSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCCC--------------------------CCCchHHHHHHHhC
Confidence 578999999999999999999998 88888875321 22456789999999
Q ss_pred CCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCce
Q 018323 94 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 172 (358)
Q Consensus 94 l~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g~ 172 (358)
++. +++.++.+|++++.||..|..+|++|.++.+||+++|.++... . +......+
T Consensus 111 l~~~~a~di~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~~s~~~-----------d-------------~~~~~~~~ 166 (350)
T 4ewp_A 111 ATPAPAYDVSAACAGYCYGVAQADALVRSGTARHVLVVGVERLSDVV-----------D-------------PTDRSISF 166 (350)
T ss_dssp CTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGC-----------C-------------TTCTTTGG
T ss_pred CCCceEEEeecchhhHHHHHHHhhhhhhCCCccceeEeeeeeceecc-----------c-------------cccccccc
Confidence 986 8899999999999999999999999999999999999843211 0 22234567
Q ss_pred eeecceEEEEeccHHHHHhcCCeeeEEEEeee-e-----------------------ecCCCCCC------CC--CCCh-
Q 018323 173 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYG-M-----------------------SGDAHHIT------QP--HIDG- 219 (358)
Q Consensus 173 ~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~-~-----------------------~~~~~~~~------~~--~~~~- 219 (358)
.+||||+|+||+..+.. + +.....+.. . ..+..... .+ ..++
T Consensus 167 lfgDGA~A~vl~~~~~~---~--~~~~~~~sdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 241 (350)
T 4ewp_A 167 LLGDGAGAVIVAASDEP---G--ISPSVWGSDGERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGP 241 (350)
T ss_dssp GBCEEEEEEEEEEESSC---C--BCCCEEEECGGGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHH
T ss_pred ccccchheeeeecccCC---C--ccceeeeecccccceeeecCCccccCcccccccccCCccccccccccccceeEehhH
Confidence 89999999999864321 1 111111100 0 00000000 00 0011
Q ss_pred -------HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhH
Q 018323 220 -------KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 292 (358)
Q Consensus 220 -------~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~ 292 (358)
....+.++++|+++|++++|||++.+|-.+.. + ...+.+.++-.. ... +...-..+||+.+||=.
T Consensus 242 ~v~~~a~~~~~~~i~~~L~~~gl~~~did~~v~Hq~~~~----i-~~~~~~~Lgl~~--~~~-~~~~l~~~GNtssasi~ 313 (350)
T 4ewp_A 242 SVFRWAVWSMAKVAREALDAAGVEPEDLAAFIPHQANMR----I-IDEFAKQLKLPE--SVV-VARDIADAGNTSAASIP 313 (350)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTCCGGGEEEEEECCSCHH----H-HHHHHHHTTCCT--TSE-ECCTHHHHCBCGGGHHH
T ss_pred HHHHHHHHhhhHHHHHHHHhhcCChhHhceEEecCCCHH----H-HHHHHHHcCcCh--HhE-EecccccccchHHHHHH
Confidence 12346789999999999999999999943322 2 333444444321 111 11122357998888766
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 293 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 293 ~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
+.|.++ ++++.+ .+.+.++..+||-|=+..++||+
T Consensus 314 ~~L~~~---~~~g~~-------------------------~~Gd~vll~~fG~G~t~~~~vlr 348 (350)
T 4ewp_A 314 LAMHRL---LEENPE-------------------------LSGGLALQIGFGAGLVYGAQVVR 348 (350)
T ss_dssp HHHHHH---HHHCGG-------------------------GTTSEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHH---HHhCCC-------------------------CCcCEEEEEEEchhhEeEEEEEE
Confidence 555444 344432 22356777789977777777776
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=99.79 E-value=5.9e-19 Score=165.81 Aligned_cols=263 Identities=16% Similarity=0.095 Sum_probs=170.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+++|+++++++ .|++++.++ + ..+..+.+|+..|
T Consensus 101 ~~~~La~~Aa~~aL~~ag~~~~dId-----~vi~~t~t~----------------------~-----~~p~~a~~v~~~L 148 (393)
T 3ov2_A 101 EIPRLAKEAAEKAIKEWGRPKSEIT-----HLVFCSISG----------------------I-----DMPGADYRLATLL 148 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGCC-----EEEEEESSC----------------------C-----CBSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEEeCC----------------------C-----CCCCHHHHHHHHc
Confidence 4678999999999999999999998 899988652 1 1235688999999
Q ss_pred CCCCC---ceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCC
Q 018323 93 GFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 169 (358)
Q Consensus 93 gl~gp---~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 169 (358)
|+++. .+.++.+|++++.||..|.++|++|.++.|||+|+|.++..+. . +.+ +.++...
T Consensus 149 Gl~~~~~~~~~v~~~C~g~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~~----------~------~~d--~~~~~~~ 210 (393)
T 3ov2_A 149 GLPLTVNRLMIYSQACHMGAAMLRIAKDLAENNRGARVLVVACEITVLSFR----------G------PNE--GDFEALA 210 (393)
T ss_dssp TCCTTSEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECGGGTCC----------C------CCT--TCHHHHH
T ss_pred CCCCCcceeeEEcCccHHHHHHHHHHHHHHHcCCCCEEEEEEEeccchhcc----------C------Ccc--cchhhhc
Confidence 99974 6899999999999999999999999999999999998531110 0 000 0111113
Q ss_pred CceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCC--C------------CCCCCCCCh-----HHHHHHHHHHH
Q 018323 170 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDA--H------------HITQPHIDG-----KGAILAMTRAL 230 (358)
Q Consensus 170 ~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~--~------------~~~~~~~~~-----~~~~~~~~~al 230 (358)
..+++||||+|+||++.+... .....+ .+...+....+ . .... +... ..+..+++++|
T Consensus 211 ~~~lFGDGAaA~vl~~~~~~~-~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L 287 (393)
T 3ov2_A 211 GQAGFGDGAGAVVVGADPLEG-IEKPIY-EIAAAMQETVAESQGAVGGHLRAFGWTFYF-LNQLPAIIADNLGRSLERAL 287 (393)
T ss_dssp HHHHBCCEEEEEEEESSCCTT-TCCCSE-EEEEEEEEECTTCTTSEEEEEETTEEEEEE-CTTHHHHHHTTSHHHHHHHH
T ss_pred ccccccCccEEEEEEecCCCc-ccCcee-EEEecCcEEecCCcccCceeeeCCceEEEE-CcHHHHHHHHHHHHHHHHHH
Confidence 467899999999998654211 011112 22221111100 0 0000 0111 11246789999
Q ss_pred HHcCCCC-CCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCccee-cccCCcCCcccchhHHHHHHHHHH-HHhCCC
Q 018323 231 KQSGLQS-HQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLA-IHHGVA 307 (358)
Q Consensus 231 ~~agl~~-~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~-~~k~~~Gh~~~asG~~~l~~~~~~-l~~~~i 307 (358)
+++|+++ +|| ++.+|- .+-.+ ..++.+.++-.. .+++.+ .+-..+||+.+|+=.+.|-+++.. ++.|.+
T Consensus 288 ~~~gl~~~~di-~~v~Hq----~n~~i-~~~v~~~Lgl~~--ek~~~s~~~l~~~GNtssAsip~~L~~~~~~~~~~g~~ 359 (393)
T 3ov2_A 288 APLGVREWNDV-FWVAHP----GNWAI-IDAIEAKLQLSP--DKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRS 359 (393)
T ss_dssp GGGTCCSGGGS-EEEECC----CCHHH-HHHHHHHHTCCT--TTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCS
T ss_pred HHcCCCcccCc-EEEECC----CChHH-HHHHHHHcCCCH--HHHHHHHHHHHHhCChHHhHHHHHHHHHHHhhhhcCCc
Confidence 9999997 888 899993 33232 344444454332 223221 123467999999877777666543 223432
Q ss_pred CCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 308 PLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 308 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
.| ..+....+..+||-|-+..+++|++.+
T Consensus 360 ~~----------------------G~~~d~vll~~fG~G~t~~~~ll~~~~ 388 (393)
T 3ov2_A 360 TT----------------------GDGLQWGVLLGFGPGLSIETVVLRSMP 388 (393)
T ss_dssp BT----------------------TTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred CC----------------------CCCCCeEEEEEECccceeeeeeeEEcc
Confidence 11 011267888899999999999998753
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-18 Score=163.10 Aligned_cols=261 Identities=14% Similarity=0.100 Sum_probs=162.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+++|+++++++ .|++++.++ + ..+..+.+|+..|
T Consensus 95 ~~~~La~~Aa~~AL~~ag~~~~dId-----~li~~t~t~----------------------~-----~~p~~a~~v~~~L 142 (387)
T 3oit_A 95 AVPELAAEAAKKAIAEWGRPAADIT-----HLVVTTNSG----------------------A-----HVPGVDFRLVPLL 142 (387)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGCC-----EEEEEESSC----------------------C-----EESCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeeCC----------------------C-----CcccHHHHHHHHh
Confidence 5778999999999999999999998 899988652 1 1235688999999
Q ss_pred CCCCC---ceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCC
Q 018323 93 GFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 169 (358)
Q Consensus 93 gl~gp---~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 169 (358)
|+++. .+.++.+|++++.||..|.++|++|.++.|||+++|.++..+. . +.+ +.++...
T Consensus 143 Gl~~~~~~~~~~~~~C~~~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~~----------~------~~d--~~~~~~~ 204 (387)
T 3oit_A 143 GLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELTLMYFT----------G------PDE--GCFRTLL 204 (387)
T ss_dssp TCCTTCEEEEEECCGGGHHHHHHHHHHHHHHSSTTCEEEEEEEECGGGTCC----------C------CCS--SSCHHHH
T ss_pred CCCCCcceeeEECchhHHHHHHHHHHHHHHhcCCCCEEEEEEEeccchhcc----------C------ccc--cchHhhh
Confidence 99873 6899999999999999999999999999999999998531110 0 000 1111123
Q ss_pred CceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCC-------CCC------CCCC-----hHHHHHHHHHHHH
Q 018323 170 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH-------ITQ------PHID-----GKGAILAMTRALK 231 (358)
Q Consensus 170 ~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~-------~~~------~~~~-----~~~~~~~~~~al~ 231 (358)
..+++||||+|+||++.+. ....+..++.+.+....+.. ... .... ...+..+++++|+
T Consensus 205 ~~~lFGDGAaA~vl~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~L~ 281 (387)
T 3oit_A 205 VQGLFGDGAAAVIVGADAD---DVERPLFEIVSAAQTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFG 281 (387)
T ss_dssp HHHHBCCEEEEEEEESSCC---SSCCCCEEEEEEEEEECTTCTTSEEEEECSSSEEEEECTTHHHHHHHHHHHHHHHHTG
T ss_pred cccccccceEEEEEecCCC---cccCCceEEEecccEEeCCChhhccceeecCCeEEEECcHHHHHHHHHHHHHHHHHHH
Confidence 4678999999999987541 11112234443332211100 000 0011 1334567788888
Q ss_pred Hc----CCCCCCcc--EEEecCCCCCCCcHHHHHHHHHHhhcccCCCCccee-cccCCcCCcccchhHHHHHHHHHHHHh
Q 018323 232 QS----GLQSHQVD--YVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLAIHH 304 (358)
Q Consensus 232 ~a----gl~~~did--~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~-~~k~~~Gh~~~asG~~~l~~~~~~l~~ 304 (358)
++ |++ |+| ++.+|-.+ -.+ ..++.+.++... .++..+ .+-..+||+.+|+=.+.|-++. +
T Consensus 282 ~~~~~~gl~--d~d~~~~v~Hq~n----~~i-l~~v~~~Lgl~~--ek~~~s~~~l~~~GNtssAsip~~L~~~~----~ 348 (387)
T 3oit_A 282 PLLGGDGGG--GWNDLFWAVHPGS----STI-MDQVDAALGLEP--GKLAASRRVLSDYGNMSGATVIFALDELR----R 348 (387)
T ss_dssp GGCC--------GGGSEEEECCCC----HHH-HHHHHHHHTCCT--TTTHHHHHHHHHHCBCGGGHHHHHHHHHH----H
T ss_pred hhcccCCCC--cccccEEEECCCC----HHH-HHHHHHHcCCCH--HHHHHHHHHHHHhCchHHhHHHHHHHHHH----H
Confidence 88 887 666 99999333 222 344444444322 222222 1234679998887666655432 2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 305 GVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 305 ~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
+.+.+- . ...+....+..+||-|-+..+++|++.+
T Consensus 349 ~~~~~G------------------~-~g~~~d~vll~~fG~G~t~~~~ll~~~~ 383 (387)
T 3oit_A 349 QRKEAA------------------A-AGEWPELGVMMAFGPGMTVDAMLLHATS 383 (387)
T ss_dssp C-----------------------------CCEEEEEEEETTTEEEEEEEEECC
T ss_pred hhhccC------------------C-CCCCCCEEEEEEecccceeeeeeeEecc
Confidence 222110 0 0011367888899999999999999864
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2.6e-17 Score=157.26 Aligned_cols=181 Identities=14% Similarity=0.123 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+++|+++++++ .|++++.++.. ..+..+..|+..|
T Consensus 51 ~~~~La~~Aa~~aL~~agi~~~~Id-----~li~~t~t~~~--------------------------~~p~~a~~v~~~l 99 (450)
T 2f82_A 51 DVISMSFNAVTSLLEKYKIDPKQIG-----RLEVGSETVID--------------------------KSKSIKTFLMQLF 99 (450)
T ss_dssp CHHHHHHHHHHHHHHHTTCCGGGEE-----EEEEECCCCSC--------------------------SSSCHHHHHTHHH
T ss_pred CHHHHHHHHHHHHHHHcCcCHHHCC-----EEEEEecCCCC--------------------------CCCcHHHHHHHHh
Confidence 3578999999999999999887765 67778764211 1235678899999
Q ss_pred CC---C-CCceeccCCchhHHHHHHHHHHHHHcCCC--CEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCc
Q 018323 93 GF---Q-GPNHAAVTACATGAHSIGDAARMIQFGDS--DVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFD 166 (358)
Q Consensus 93 gl---~-gp~~~v~~~cas~~~Al~~A~~~I~~G~~--d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~ 166 (358)
|+ + .+++.++.+|+|++.||..|.++|++|.+ +.|||+|+|.+. |+
T Consensus 100 gl~g~~~~~~~~v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~~----------------------------~~ 151 (450)
T 2f82_A 100 EKCGNTDVEGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAV----------------------------YA 151 (450)
T ss_dssp HTTTCCCCBCCEECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEEC----------------------------CS
T ss_pred CCcCCCCceEEEhhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeecc----------------------------cc
Confidence 98 3 48899999999999999999999999998 999999999741 11
Q ss_pred CCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCC-------CCCCChH--------HHHHHHHHHHH
Q 018323 167 CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHIT-------QPHIDGK--------GAILAMTRALK 231 (358)
Q Consensus 167 ~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~-------~~~~~~~--------~~~~~~~~al~ 231 (358)
......++||||+|+||++.+. . .+.....|..... -.... .|...+. .+..+++++++
T Consensus 152 ~~~~~~~fGDGA~A~ll~~~~~----~-~~~~~~~g~~~~~-~~d~~~p~~~~~~~~~~G~~~~~~~~~~l~~~~~~~l~ 225 (450)
T 2f82_A 152 EGPARPTGGAAAIAMLIGPDAP----I-VFESKLRGSHMAH-VYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCN 225 (450)
T ss_dssp SSTTGGGCEEEEEEEEEESSCS----E-EEEEEEEEEEECC-CCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcccccceEEEEeccCCc----e-EEEeccceeehhh-ccceeeeCCCCCceeecCccHHHHHHHHHHHHHHHHHH
Confidence 1235678999999999986431 1 1111123322221 11111 1222222 24467777886
Q ss_pred ------HcCCCCCCccEEEecCCCCCCCcHHHH
Q 018323 232 ------QSGLQSHQVDYVNAHATSTPLGDTVEA 258 (358)
Q Consensus 232 ------~agl~~~did~i~~h~~gt~~~d~~E~ 258 (358)
++|++++|||++.+|..+++..+.+..
T Consensus 226 ~~~~~~~agl~~~did~~v~Hq~~~~i~~~~~~ 258 (450)
T 2f82_A 226 KFEKLEGKEFSINDADYFVFHSPYNKLVQKSFA 258 (450)
T ss_dssp HHHHHHSSCCCGGGCSEEEECCSSHHHHHHHHH
T ss_pred HhhhccccCCChhhcCEEEecCChHHHHHHHHH
Confidence 899999999999999988887666543
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=99.73 E-value=6.2e-17 Score=154.25 Aligned_cols=262 Identities=12% Similarity=0.071 Sum_probs=163.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcCC
Q 018323 15 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 94 (358)
Q Consensus 15 ~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 94 (358)
..|+.+|+++||+++|+++++|+ .|++++++ ++ ..+..+.+|+..||+
T Consensus 111 ~~La~~Aa~~AL~~agi~~~dId-----~li~~t~t-~~--------------------------~~P~~a~~v~~~LGl 158 (465)
T 3e1h_A 111 VPLAVEASRKAMAEARLVPAQIT-----HMVSTTCT-DS--------------------------ANPGYDHYVAKELGL 158 (465)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSS-CC--------------------------CSSCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeeC-CC--------------------------CCCcHHHHHHHHhCC
Confidence 48999999999999999999998 88888864 11 123568899999999
Q ss_pred CC-C-ceec-cCCchhHHHHHHHHHHHHHc----CCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcC
Q 018323 95 QG-P-NHAA-VTACATGAHSIGDAARMIQF----GDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC 167 (358)
Q Consensus 95 ~g-p-~~~v-~~~cas~~~Al~~A~~~I~~----G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~ 167 (358)
++ + .+.| +.+|++++.||..|.++|++ |.++.|||+++|.++....+. ...... ..+.
T Consensus 159 ~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a~~~~G~~~~vLVvg~E~~S~~~~~~-~~~~~~--------------~~~d 223 (465)
T 3e1h_A 159 SDRLEKVLLHGIGCSGGLAALRTAANLCLGHTARGKPARILVLALEVSTTMVRSE-LESIDA--------------LQET 223 (465)
T ss_dssp CTTCEEEEECSCGGGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEECCGGGHHHH-HHHHHH--------------HTCC
T ss_pred CCCeeEEEecCCcchHHHHHHHHHHHHHhcccccCCCCEEEEEEEeecchhcCcc-cccccc--------------cccc
Confidence 87 4 6888 79999999999999999997 999999999999964433221 111000 0122
Q ss_pred CCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCC---------------CCCC---ChHHHHHHHHHH
Q 018323 168 GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHIT---------------QPHI---DGKGAILAMTRA 229 (358)
Q Consensus 168 ~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~---------------~~~~---~~~~~~~~~~~a 229 (358)
....+++||||+|+||++.+... .....+..+.+......+.... .+.. ....+..+++++
T Consensus 224 ~~t~~LFGDGAaAvVl~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~~~ 302 (465)
T 3e1h_A 224 RIGIALFSDCASAVILSNGIGEA-PGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADL 302 (465)
T ss_dssp CCHHHHBCCEEEEEEEECCTTCC-TTCCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHH
T ss_pred cccccccccceeEEEEEccCCCc-cccccceeeccceEEEecCCccccCccccCCCceEecChHHHHHHHHHHHHHHHHH
Confidence 34567899999999998753210 0011222444433222111100 0100 013345677888
Q ss_pred HHH-------cCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCccee-cccCCcCCcccchhHHHHHHHHHH
Q 018323 230 LKQ-------SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLA 301 (358)
Q Consensus 230 l~~-------agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~-~~k~~~Gh~~~asG~~~l~~~~~~ 301 (358)
|++ +|++++|||++ +| +.+-.+ ..++.+.++... .+++.+ ..-..+||+.+|+=.+.|-+++
T Consensus 303 L~~~g~~L~~agl~~~DId~~-~H----qan~rI-l~~v~~~Lgl~~--ek~~~s~~~l~~yGNtsSASip~aL~~~~-- 372 (465)
T 3e1h_A 303 LSSLQDQLPSSYQKPADFDWA-MH----PGGATI-LSGAESAMGLTP--EHMRASYDRYINHGNSSSATIFSVLNRLR-- 372 (465)
T ss_dssp HHHHGGGSCTTSCSGGGSEEE-EC----CSSHHH-HHHHHHHHTCCG--GGGHHHHHHHHHHCBCGGGHHHHHHHHHT--
T ss_pred HHhccccccccCCCHHHceEE-ec----CCChHH-HHHHHHHhCcCH--HHhHHHHHHHhcceechHhHHHHHHHHHH--
Confidence 887 67999999998 99 333222 344444444322 112111 1112458888877555444332
Q ss_pred HHh--CCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 302 IHH--GVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 302 l~~--~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
+. +.+.|. ......++..+||-|=+..++||+.
T Consensus 373 -~~~~g~l~~G---------------------g~~~d~vll~gfG~Glt~~~~llr~ 407 (465)
T 3e1h_A 373 -EKDMDALAPG---------------------GKVKEYVVGCAFGPGINVEMCMLKR 407 (465)
T ss_dssp -STTTTSCSSS---------------------SCCCSEEEEEEEETTTEEEEEEEEE
T ss_pred -HhcccccCCC---------------------CCCCCEEEEEEEhHHHhhhheeeEE
Confidence 22 222110 0123678888999988888888875
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.72 E-value=4.8e-16 Score=146.21 Aligned_cols=241 Identities=17% Similarity=0.020 Sum_probs=159.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+++|+++++|+ .|++++.++. ..+..+.+|+..+
T Consensus 136 ~~~~La~~Aa~~AL~~agi~~~dId-----~li~~t~t~~---------------------------~~P~~a~~v~~~L 183 (413)
T 3v7i_A 136 AVQAYGERAARGALQIAGLDVADVD-----CLITSNSTTP---------------------------ALPGLDVALANRL 183 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECCSSC---------------------------CSSCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhCcCHHHCC-----EEEEEccCCC---------------------------CcCHHHHHHHHHh
Confidence 4567999999999999999999998 8999887521 1234678999999
Q ss_pred CCCC--Cceec-cCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCC
Q 018323 93 GFQG--PNHAA-VTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 169 (358)
Q Consensus 93 gl~g--p~~~v-~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 169 (358)
|+++ +.+.+ +.+|++++.||..|.++|++|.++.|||+|+|.++... . ++.+.
T Consensus 184 Gl~~~~~~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~~-----------------------~-~~d~~ 239 (413)
T 3v7i_A 184 PLRGDTMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALSTTY-----------------------Q-PADDT 239 (413)
T ss_dssp TCCTTCEEEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGGC-----------------------C-SSCCS
T ss_pred CCCCCceEEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccccc-----------------------C-ccccc
Confidence 9986 45777 89999999999999999999999999999999853221 0 11112
Q ss_pred C-----ceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCC-------------CCCCC----hHHHHHHHH
Q 018323 170 D-----GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHIT-------------QPHID----GKGAILAMT 227 (358)
Q Consensus 170 ~-----g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~-------------~~~~~----~~~~~~~~~ 227 (358)
. ..++||||+|+||++.+.. . +.-++.+......+.... ..+.. ......+++
T Consensus 240 ~~~lv~~~LFGDGAaAvvl~~~~~~----~-~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~m~~~v~~~v~~~~~~i~ 314 (413)
T 3v7i_A 240 LESLIVRLLFADTAVAAVVTGRPRP----E-SVLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPRAVQETVTAMW 314 (413)
T ss_dssp TTHHHHHHHBCCEEEEEEEESSCCT----T-EEEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHH
T ss_pred hhhhhcceeeccccEEEEEEecCCC----C-CCEEEEccccEEeCCCccccCccccCCceEEEECcHHHHHHHHHHHHHH
Confidence 2 5789999999999874321 1 112344433211111000 00000 122456788
Q ss_pred HHHH------HcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhh--cccCCCCcc--eecccCCcCCcccchhHHHHHH
Q 018323 228 RALK------QSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFS--DHATSGSLA--FSSTKGAIGHLLGAAGAVEAIF 297 (358)
Q Consensus 228 ~al~------~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~--~~~~~~~~~--v~~~k~~~Gh~~~asG~~~l~~ 297 (358)
++|+ ++|++ ||++.+|-.+ -.+ ..++.+.++ -.. .++. .... . +||+.+|+=.+.|-+
T Consensus 315 ~~L~~~~~~~~~gl~---id~~v~Hq~~----~~i-l~~v~~~Lg~~l~~--ek~~~s~~~l-~-~GNtssAsi~~~L~~ 382 (413)
T 3v7i_A 315 EWLRVRYEDDPSSWH---PDVLLAHPGG----TRV-LEYMEQTMPDEWPS--GLLSYSRDSY-T-SGNRGGAAVFDILRR 382 (413)
T ss_dssp HHHHHHTSSSCTTCC---CCEEEEECSS----HHH-HHHHHHHSCSSCCS--CSTHHHHHHH-T-TCBCGGGHHHHHHHH
T ss_pred HHHhhccccccCCCc---eeEEEECCCC----hHH-HHHHHHHhCCCCCH--HHhhccceEe-c-eeChHHHHHHHHHHH
Confidence 8999 89987 9999999333 222 344555555 221 2231 2333 3 899998886666655
Q ss_pred HHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 298 AVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 298 ~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
++ ++ .+ .+...++..+||-|=+..+++|+
T Consensus 383 ~~---~~-~~-------------------------~~Gd~vll~~fG~Glt~~~~ll~ 411 (413)
T 3v7i_A 383 AH---DA-GQ-------------------------KTGSRAVLYAAAPGLTATALEGE 411 (413)
T ss_dssp HH---HH-CC-------------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred HH---hC-CC-------------------------CCCCEEEEEEECHHHhHhhhheE
Confidence 44 22 21 11356778899988888888775
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=99.69 E-value=3.1e-15 Score=135.07 Aligned_cols=191 Identities=18% Similarity=0.162 Sum_probs=124.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||++||+++++|| .+++++.+. + ...+..++..++
T Consensus 55 ~sdLa~~Aa~~AL~~AGi~~~DID-----~II~gt~t~----------------------q-------~~~A~~va~~Lg 100 (347)
T 3lma_A 55 ERKLMEDAVQSALSKQNLKKEDID-----IFLAGDLLN----------------------Q-------NVTANYVARHLK 100 (347)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCS-----EEEEEESSS----------------------S-------STTHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCC----------------------c-------hhHHHHHHHHhC
Confidence 457999999999999999999998 899987641 1 113556777775
Q ss_pred CCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCcee
Q 018323 94 FQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFV 173 (358)
Q Consensus 94 l~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g~~ 173 (358)
+ |.+.|+++|+|++.||..|.++|++|.++.|||+|+|.++.......+.. .-+..+|. ....
T Consensus 101 i--pafdV~~ACsg~~~AL~~Aa~~I~sG~~~~VLVVGaE~~S~aerq~r~p~-----------e~g~q~p~----ta~~ 163 (347)
T 3lma_A 101 I--PFLCLFGACSTSMESIAISSALIDGGFAKRALAATSSHNATAERQFRYPT-----------EYGGQKPG----TATS 163 (347)
T ss_dssp C--CEEEBCCSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGTTCCC-------------------------------
T ss_pred C--CEEEecChhHHHHHHHHHHHHHHhcCCCCEEEEEEeccccchhhhccCcc-----------hhcccCCc----hhcE
Confidence 4 89999999999999999999999999999999999998654321100000 00111222 1223
Q ss_pred eecceEEEEeccHHHHHhcCCeeeEEEEeeee--ecCCCCCCCCCCCh----HHHHHHHHHHHHHcCCCCCCccEEEecC
Q 018323 174 IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGM--SGDAHHITQPHIDG----KGAILAMTRALKQSGLQSHQVDYVNAHA 247 (358)
Q Consensus 174 ~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~--~~~~~~~~~~~~~~----~~~~~~~~~al~~agl~~~did~i~~h~ 247 (358)
.+|||+|+||++.. ..+ +|.+... ..| .....|...+ +...+++++.|+++|++|+|+|+|..+.
T Consensus 164 t~dGAGA~VL~~~g------~~p--~I~~~t~Gkvvd-~g~~d~~nmg~amaPaA~~ti~~~l~d~g~~~~d~D~ivtgd 234 (347)
T 3lma_A 164 TVTGSGAVVLSQQP------GGI--KITSATVGRVID-LGITDSQDMGSAMAPAAADTIKQHLEDLGRTPDDYDLILTGD 234 (347)
T ss_dssp CCCEEEEEEEESSC------CSE--EEEEEECCCCBC-CSCCCTTCHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEES
T ss_pred EccceeEEEEEecC------CCC--ceeeeeeeeeec-cCCCCCCCccccchHHHHHHHHHHHHHhCCCHHHcCEEecCC
Confidence 46899999998643 122 2333221 111 1222332222 3445678999999999999999999652
Q ss_pred CCCCCCcHHHHHHHHHHhhccc
Q 018323 248 TSTPLGDTVEATAIRTVFSDHA 269 (358)
Q Consensus 248 ~gt~~~d~~E~~a~~~~~~~~~ 269 (358)
.+ .+-...+.+++.+..
T Consensus 235 L~-----q~g~~il~~l~~~~g 251 (347)
T 3lma_A 235 LS-----GVGSPILKDLLKEEG 251 (347)
T ss_dssp CH-----HHHHHHHHHHHHHTT
T ss_pred hH-----HHHHHHHHHHHHHcC
Confidence 21 122344777776544
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=4.5e-16 Score=145.64 Aligned_cols=216 Identities=14% Similarity=0.111 Sum_probs=138.5
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+++| +++|+ .|++++.++.. ..+..+..|+..|
T Consensus 55 ~~~~La~~Aa~~aL~~a~--~~~Id-----~li~~t~t~~~--------------------------~~ps~a~~v~~~L 101 (388)
T 3v4n_A 55 DIVTFAANAAEAILTKED--KEAID-----MVIVGTESSID--------------------------ESKAAAVVLHRLM 101 (388)
T ss_dssp CHHHHHHHHHHTTCCHHH--HHHEE-----EEEEECSSCSB--------------------------SSSCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHhCC--cccCC-----EEEEEeccCCC--------------------------cCccHHHHHHHHc
Confidence 357899999999999997 66676 78888765321 1235678999999
Q ss_pred CCCC--CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCC
Q 018323 93 GFQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 170 (358)
Q Consensus 93 gl~g--p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 170 (358)
|+++ +++.+..+|++++.||..|.++|++|.++.|||+++|.+.... + ..+
T Consensus 102 Gl~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvg~e~~s~~~--------------------------~-~~~ 154 (388)
T 3v4n_A 102 GIQPFARSFEIKEAXYGATAGLQLAKNHVALHPDKKVLVVAADIAKYGL--------------------------N-SGG 154 (388)
T ss_dssp TCCSSCEEEEEESGGGHHHHHHHHHHHHHHHCTTCEEEEEEEEEECCCT--------------------------T-CTT
T ss_pred CCCCCceEeehhhhhhHHHHHHHHHHHHHhcCCCCEEEEEEehhhcccC--------------------------C-CCC
Confidence 9985 7889999999999999999999999999999999999852211 1 112
Q ss_pred ceeeecceEEEEeccHHHHHhcCCeeeEEEEe-eeeecCCCCCCCCC------CCh--------HHHHHHHHHHHHHcCC
Q 018323 171 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRG-YGMSGDAHHITQPH------IDG--------KGAILAMTRALKQSGL 235 (358)
Q Consensus 171 g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g-~~~~~~~~~~~~~~------~~~--------~~~~~~~~~al~~agl 235 (358)
..++||||+|+||++.+ .+...-.. .+...+......|. ..+ ..+..+++++|+++|+
T Consensus 155 ~~lfGDGA~A~ll~~~~-------~il~~~~~~~~~~~~~~df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g~ 227 (388)
T 3v4n_A 155 EPTQGAGAVAMLVSSEP-------RILALKEDNVMLTQDIYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGL 227 (388)
T ss_dssp GGGCEEEEEEEEEEESC-------SSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCccccceeEEEeecCC-------CceEEeccccccchhccccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhCC
Confidence 47799999999998632 12111001 11111111001111 111 3345678899999999
Q ss_pred CCCCccEEEecCCCCCCCcHHHH-------HHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHH
Q 018323 236 QSHQVDYVNAHATSTPLGDTVEA-------TAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAV 299 (358)
Q Consensus 236 ~~~did~i~~h~~gt~~~d~~E~-------~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~ 299 (358)
+++|||++.+|-......-..-. ..+.+.++... . .....-..+||+.+||=.+.|..++
T Consensus 228 ~~~did~~v~Hqp~~k~~~ka~~ril~~~~~~~~~~l~~~~--e--~~~~~~~~~GN~~sASi~l~L~~~l 294 (388)
T 3v4n_A 228 DFADYDALAFHIPYTKMGKKALLAKISDQTEAEQERILARY--E--ESIIYSRRVGNLYTGSLYLGLISLL 294 (388)
T ss_dssp CGGGCSEEEECCSSHHHHHHHHHHHSTTSCHHHHHHHHHHH--H--HHTTTGGGTCCCGGGHHHHHHHHHH
T ss_pred CHHHCCEEEeCCCcchHHHHHHHHHHhcccHHHHHHhCCCH--H--HHhhHHHhcCchHHHHHHHHHHHHH
Confidence 99999999999433221111100 11122222111 0 1122335679999888776665554
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.59 E-value=3.5e-15 Score=143.11 Aligned_cols=174 Identities=11% Similarity=0.120 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+++|+++++|+ .+++++.++.. ..+..+..|+..|
T Consensus 72 ~~~~La~~Aa~~aL~~agi~~~dId-----~li~~T~t~~~--------------------------~~ps~a~~v~~~L 120 (478)
T 2p8u_A 72 DINSLCMTVVQNLMERNNLSYDCIG-----RLEVGTETIID--------------------------KSKSVKTNLMQLF 120 (478)
T ss_dssp CHHHHHHHHHHHHHHHTTCCGGGEE-----EEEEECSCCSC--------------------------SSSCHHHHHGGGT
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEccCCcc--------------------------cCccHHHHHHHHH
Confidence 3578999999999999999887776 78888765321 1234567788554
Q ss_pred C---CCC-CceeccCCchhHHHHHHHHHHHHHcCC--CCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCc
Q 018323 93 G---FQG-PNHAAVTACATGAHSIGDAARMIQFGD--SDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFD 166 (358)
Q Consensus 93 g---l~g-p~~~v~~~cas~~~Al~~A~~~I~~G~--~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~ 166 (358)
+ ++. +++.+..+|++++.||..|.++|++|. .+.|||+++|.. . |.
T Consensus 121 ~~lG~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Eia-~---------------------------~~ 172 (478)
T 2p8u_A 121 EESGNTDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIA-V---------------------------YA 172 (478)
T ss_dssp TTTTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEE-C---------------------------CC
T ss_pred hhcCCCCceEEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeeee-c---------------------------cc
Confidence 4 454 788899999999999999999999999 999999999941 0 22
Q ss_pred CCCCceeeecceEEEEeccHHHHHhcCCeeeEEEE----eeeeecCCCCCCCC-------CCChHH-----------HHH
Q 018323 167 CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVR----GYGMSGDAHHITQP-------HIDGKG-----------AIL 224 (358)
Q Consensus 167 ~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~----g~~~~~~~~~~~~~-------~~~~~~-----------~~~ 224 (358)
......++||||+|+||++.+. . .+. |.. ..+......| ..++.. ...
T Consensus 173 ~~~~~~~fGdGA~A~Ll~~~~~-------~--~l~~~~~gs~-~~~~~d~~~p~~~~~~~~~dG~~s~~~y~~a~~~~~~ 242 (478)
T 2p8u_A 173 TGNARPTGGVGAVALLIGPNAP-------L--IFERGLRGTH-MQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYS 242 (478)
T ss_dssp SSTTGGGCEEEEEEEEEESSCS-------E--EECTTCCEEE-ECCCCSEECCCTTCSSCEECHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcccceeEEEEEecCCC-------c--eEeeccceec-ccchhheeeecCCCcceEEcCcchHHHHHHHHHHHHH
Confidence 2224578999999999976321 1 111 111 1111111111 111211 113
Q ss_pred HHHHHHH--------HcCCCCCCccEEEecCCCCCCCcH
Q 018323 225 AMTRALK--------QSGLQSHQVDYVNAHATSTPLGDT 255 (358)
Q Consensus 225 ~~~~al~--------~agl~~~did~i~~h~~gt~~~d~ 255 (358)
.+++.++ ++|++++|||++.+|-.+....+.
T Consensus 243 ~~~~~l~~~~~~~~~~~g~~~~did~~v~H~~~~ki~~~ 281 (478)
T 2p8u_A 243 VYCKKIHAQWQKEGNDKDFTLNDFGFMIFHSPYCKLVQK 281 (478)
T ss_dssp HHHHHHHHHHHHHTCCCCCCGGGCSEEEECCSSHHHHHH
T ss_pred HHHHHHhhhccccccccCCChHHcCEEEecCCcHHHHHH
Confidence 4556666 679999999999999766555444
|
| >2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.29 E-value=6.9e-12 Score=120.12 Aligned_cols=114 Identities=12% Similarity=0.096 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+++|+++||+++|+++++|+ .++++|.++.. ..+..++.|...||
T Consensus 54 ~~~ma~~Aa~~al~~a~i~~~~Id-----~ii~aT~t~~~--------------------------~~ps~a~~v~~~l~ 102 (460)
T 2wya_A 54 INSLCLTVVQRLMERIQLPWDSVG-----RLEVGTETIID--------------------------KSKAVKTVLMELFQ 102 (460)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGEE-----EEEEECSCCSC--------------------------SSSCHHHHHGGGTG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCCC--------------------------CCCchHHHHHHHHh
Confidence 467999999999999999988776 68888865321 12346778888887
Q ss_pred CCC----CceeccCCchhHHHHHHHHHHHHHcCCCCEE--EEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcC
Q 018323 94 FQG----PNHAAVTACATGAHSIGDAARMIQFGDSDVM--VAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC 167 (358)
Q Consensus 94 l~g----p~~~v~~~cas~~~Al~~A~~~I~~G~~d~v--lv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~ 167 (358)
+.| +++.+..+|++++.||..|.++|++|..+.+ |++..+.. -|..
T Consensus 103 ~~g~~~~~a~D~~~aC~g~~~al~~A~~~i~~g~~~~~lvvv~~s~~~----------------------------~~~d 154 (460)
T 2wya_A 103 DSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIA----------------------------VYPS 154 (460)
T ss_dssp GGTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEE----------------------------CCCS
T ss_pred ccCCCCeeEechhhhhhhHHHHHHHHHHHHHhccccceEEEEEecccc----------------------------cccc
Confidence 654 4578999999999999999999999987644 33333320 0222
Q ss_pred CCCceeeecceEEEEeccH
Q 018323 168 GRDGFVIGEGSGVLVLEEL 186 (358)
Q Consensus 168 ~~~g~~~geGaaa~vL~~~ 186 (358)
.......||||+|++++..
T Consensus 155 ~~~~~~~GdGA~A~l~~~~ 173 (460)
T 2wya_A 155 GNARPTGGAGAVAMLIGPK 173 (460)
T ss_dssp STTGGGCEEEEEEEEEESS
T ss_pred ccccccCcchHHhhhcccC
Confidence 3345668999999999763
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=87.08 E-value=3.7 Score=37.73 Aligned_cols=100 Identities=15% Similarity=0.045 Sum_probs=57.5
Q ss_pred EEEEeeeeecCCCC-CCCCCC-ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC-cHHHHHHHHHHhhcccCCCCc
Q 018323 198 AEVRGYGMSGDAHH-ITQPHI-DGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG-DTVEATAIRTVFSDHATSGSL 274 (358)
Q Consensus 198 a~i~g~~~~~~~~~-~~~~~~-~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~-d~~E~~a~~~~~~~~~~~~~~ 274 (358)
++|.|.+.+.-+.. ...++. ...-..++++++|+++|++++|||.+.+- +.++.. ...-...+...++.. ...
T Consensus 7 v~Ivg~~rT~~g~~~~~~~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~g-~~~~~~~~~~~a~~~~~~lGl~---~~~ 82 (395)
T 4e1l_A 7 VVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIG-NVLQTGLGQNVARQIAINAGIP---NSV 82 (395)
T ss_dssp EEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEE-CCCCSSTTCCHHHHHHHHTTCC---TTS
T ss_pred EEEEECccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCCCcchHHHHHHHHcCCC---CCc
Confidence 45677665433321 111222 23445689999999999999999987763 333221 111222233333321 012
Q ss_pred ceecccCCcCCcccchhHHHHHHHHHHHHhCC
Q 018323 275 AFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 306 (358)
Q Consensus 275 ~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 306 (358)
|... =+..+++++..+..+...++.|.
T Consensus 83 p~~~-----v~~~Css~~~al~~A~~~I~~G~ 109 (395)
T 4e1l_A 83 PSYT-----VNKLCGSGLKSVQLAAQSITSGE 109 (395)
T ss_dssp CEEE-----ECCGGGHHHHHHHHHHHHHHTTS
T ss_pred eEEE-----ccccchHHHHHHHHHHHHHhCCC
Confidence 2211 15678889999999999998875
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=86.40 E-value=4.1 Score=37.47 Aligned_cols=100 Identities=11% Similarity=0.014 Sum_probs=57.9
Q ss_pred EEEEeeeeecCCCC-CCCCCCC-hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC-cHHHHHHHHHHhhcccCCCCc
Q 018323 198 AEVRGYGMSGDAHH-ITQPHID-GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG-DTVEATAIRTVFSDHATSGSL 274 (358)
Q Consensus 198 a~i~g~~~~~~~~~-~~~~~~~-~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~-d~~E~~a~~~~~~~~~~~~~~ 274 (358)
++|.|.+.+.-+.. ...++.. ..-..++++++|+++|++++|||.+.+- +.++.. ...-...+...++... ..
T Consensus 9 v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g-~~~~~~~~~~~a~~v~~~lGl~~---~~ 84 (396)
T 4dd5_A 9 VVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLG-GVLTAGLGQNIARQIALGAGIPV---EK 84 (396)
T ss_dssp EEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEE-CSCCTTSCSCHHHHHHHHTTCCT---TS
T ss_pred EEEEEcccCCeeecCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eecCCCCCchHHHHHHHHcCCCC---Cc
Confidence 46777665433321 1122222 3445689999999999999999987763 332221 1222223333333210 12
Q ss_pred ceecccCCcCCcccchhHHHHHHHHHHHHhCC
Q 018323 275 AFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 306 (358)
Q Consensus 275 ~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 306 (358)
|...+ +..+++++..+..+...++.|.
T Consensus 85 p~~~v-----~~aCss~~~al~~A~~~I~~G~ 111 (396)
T 4dd5_A 85 PAMTI-----NIVCGSGLRSVSMASQLIALGD 111 (396)
T ss_dssp CEEEE-----CCGGGHHHHHHHHHHHHHHHTS
T ss_pred eEEEe-----ccccHHHHHHHHHHHHHHhcCC
Confidence 22211 4567889999999999998875
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=83.68 E-value=5.2 Score=36.71 Aligned_cols=100 Identities=16% Similarity=0.090 Sum_probs=57.4
Q ss_pred EEEEeeeeecCCCC-CCCCCC-ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCc-HHHHHHHHHHhhcccCCCCc
Q 018323 198 AEVRGYGMSGDAHH-ITQPHI-DGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD-TVEATAIRTVFSDHATSGSL 274 (358)
Q Consensus 198 a~i~g~~~~~~~~~-~~~~~~-~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d-~~E~~a~~~~~~~~~~~~~~ 274 (358)
+.|.|.+.+.-+.. ...++. ...-..++++++|+++|++++|||.+.+ ++.++... ..-...+...++.. ...
T Consensus 7 v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~Al~~agl~~~~Id~v~~-g~~~~~~~~~~~a~~i~~~lGl~---~~~ 82 (394)
T 3ss6_A 7 VVITAAVRSPIGTFGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVIL-GHCIQRTDEANTARTAALAAGFP---DTV 82 (394)
T ss_dssp EEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHTTCCGGGCCEEEE-ECSSCCGGGCSHHHHHHHHTTCC---TTC
T ss_pred EEEEEcccCCccccCCCCCCCCHHHHHHHHHHHHHHHcCCCHhHCCEEEE-EEccCCCccchHHHHHHHHcCCC---CCc
Confidence 45667665433221 111222 2345568899999999999999998876 33333211 11122222223321 012
Q ss_pred ceecccCCcCCcccchhHHHHHHHHHHHHhCC
Q 018323 275 AFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 306 (358)
Q Consensus 275 ~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 306 (358)
|... =+..+++++..+..+...++.|.
T Consensus 83 p~~~-----v~~aCss~~~al~~A~~~I~~G~ 109 (394)
T 3ss6_A 83 TGYT-----IQRQCSSGMQAIMSAAMQIQLGV 109 (394)
T ss_dssp EEEE-----EECGGGHHHHHHHHHHHHHHHTS
T ss_pred eEEE-----ecCcchHHHHHHHHHHHHHhCCC
Confidence 2221 24678889999999999999875
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=83.48 E-value=2.4 Score=39.37 Aligned_cols=78 Identities=17% Similarity=0.025 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHH
Q 018323 221 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVL 300 (358)
Q Consensus 221 ~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~ 300 (358)
-..+++++||+++|++++|||.+.+- +.|+..-+.-...+...++... .++ . -.+....+++|+..+..+..
T Consensus 140 La~~Aa~~AL~~agi~~~dId~li~~-t~t~~~~P~~a~~v~~~LGl~~---~~~--~--~~v~~~~Cagg~~AL~~A~~ 211 (413)
T 3v7i_A 140 YGERAARGALQIAGLDVADVDCLITS-NSTTPALPGLDVALANRLPLRG---DTM--L--LPATQWACVAGTRSLALAAD 211 (413)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEEE-CCSSCCSSCHHHHHHHHTTCCT---TCE--E--EEESSCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCHHHCCEEEEE-ccCCCCcCHHHHHHHHHhCCCC---Cce--E--EEeeCCccHHHHHHHHHHHH
Confidence 34578999999999999999997763 4443222222223333333321 111 0 11225677888888888888
Q ss_pred HHHhCC
Q 018323 301 AIHHGV 306 (358)
Q Consensus 301 ~l~~~~ 306 (358)
.++.|.
T Consensus 212 ~i~ag~ 217 (413)
T 3v7i_A 212 LVAADP 217 (413)
T ss_dssp HHHHCT
T ss_pred HHhcCC
Confidence 888764
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=82.88 E-value=3.1 Score=37.42 Aligned_cols=77 Identities=19% Similarity=0.104 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCC-CCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHH
Q 018323 220 KGAILAMTRALKQSGLQSHQVDYVNAHATSTP-LGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 298 (358)
Q Consensus 220 ~~~~~~~~~al~~agl~~~did~i~~h~~gt~-~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~ 298 (358)
.-..++++++|+++|++|+|||++... |.|+ ...+.-..-+...++... .+... + ...+++++..+..+
T Consensus 64 ~la~~Aa~~aL~~ag~~~~dId~li~~-t~t~~~~~P~~a~~v~~~LGl~~----~~a~d----i-~~~C~g~~~aL~~A 133 (350)
T 4ewp_A 64 VMAVGAAREALERAGLQGSDLDAVIVS-TVTFPHATPSAAALVAHEIGATP----APAYD----V-SAACAGYCYGVAQA 133 (350)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEEE-CSCCSCSSSCHHHHHHHHTTCTT----SCEEE----E-ECGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCCCCCchHHHHHHHhCCCC----ceEEE----e-ecchhhHHHHHHHh
Confidence 345688999999999999999987754 4443 223333444555555421 11111 1 13455667777777
Q ss_pred HHHHHhCC
Q 018323 299 VLAIHHGV 306 (358)
Q Consensus 299 ~~~l~~~~ 306 (358)
...++.+.
T Consensus 134 ~~~i~~g~ 141 (350)
T 4ewp_A 134 DALVRSGT 141 (350)
T ss_dssp HHHHHTTS
T ss_pred hhhhhCCC
Confidence 66777654
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=82.71 E-value=4.3 Score=36.49 Aligned_cols=78 Identities=10% Similarity=-0.017 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC-CcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHH
Q 018323 220 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPL-GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 298 (358)
Q Consensus 220 ~~~~~~~~~al~~agl~~~did~i~~h~~gt~~-~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~ 298 (358)
.-..++++++|+++|++++|||.+.. ++.++. ..+.-...+...++... ..+...+ ...+++|+..+..+
T Consensus 70 ~La~~Aa~~al~~ag~~~~~Id~vi~-~t~~~~~~~p~~a~~v~~~lGl~~---~~~~~~v-----~~aC~s~~~al~~A 140 (345)
T 3s21_A 70 DAATQAARKALIDANIGIEKIGLLIN-TSVSRDYLEPSTASIVSGNLGVSD---HCMTFDV-----ANACLAFINGMDIA 140 (345)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEE-CCSCCSCSSSCHHHHHHHHHTCCT---TCEEEEC-----CCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EeCCCCCCCChHHHHHHHHhCCCC---CceEEeE-----CCcCHHHHHHHHHH
Confidence 45668899999999999999999766 444432 12222333444444321 1222211 24677888889889
Q ss_pred HHHHHhCC
Q 018323 299 VLAIHHGV 306 (358)
Q Consensus 299 ~~~l~~~~ 306 (358)
...++.|.
T Consensus 141 ~~~i~~g~ 148 (345)
T 3s21_A 141 ARMLERGE 148 (345)
T ss_dssp HHHHHHTS
T ss_pred HHHHHCCC
Confidence 88888774
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=82.54 E-value=3.9 Score=36.44 Aligned_cols=77 Identities=9% Similarity=0.011 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC-cHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHH
Q 018323 220 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG-DTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 298 (358)
Q Consensus 220 ~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~-d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~ 298 (358)
.-..++++++|+++|++++|||.+..- +.++.. .+.-..-+...++.. ..+...+ ...+++|+..+..+
T Consensus 60 ~La~~Aa~~aL~~ag~~~~~Id~vi~~-t~~~~~~~p~~a~~v~~~lGl~----~~~~~~v-----~~~C~s~~~al~~A 129 (323)
T 3il3_A 60 TMGFEAAKNAIEAAQINPQDIELIIVA-TTSHSHAYPSAACQVQGLLNID----DAISFDL-----AAACTGFVYALSVA 129 (323)
T ss_dssp HHHHHHHHHHHHHHCCCGGGCCEEEEE-CSCCSCSSSCHHHHHHHHTTCS----SCEEEEE-----CCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEE-eCCCCCCCccHHHHHHHHhCCC----CccEEEE-----CCccHHHHHHHHHH
Confidence 455788999999999999999987763 433321 122223333334431 1222222 24677888888888
Q ss_pred HHHHHhCC
Q 018323 299 VLAIHHGV 306 (358)
Q Consensus 299 ~~~l~~~~ 306 (358)
...++.|.
T Consensus 130 ~~~i~~g~ 137 (323)
T 3il3_A 130 DQFIRAGK 137 (323)
T ss_dssp HHHHHTTS
T ss_pred HHHHHCCC
Confidence 88888764
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=82.38 E-value=8.8 Score=35.06 Aligned_cols=79 Identities=13% Similarity=-0.074 Sum_probs=48.9
Q ss_pred hHHHHHHHHHHHHHc-CCCCCCccEEEecCCCCCCC--cHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHH
Q 018323 219 GKGAILAMTRALKQS-GLQSHQVDYVNAHATSTPLG--DTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEA 295 (358)
Q Consensus 219 ~~~~~~~~~~al~~a-gl~~~did~i~~h~~gt~~~--d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l 295 (358)
..-..++++++|+++ |++++|||.+.+- +.++.. ...-...+...++... ..|. ..=+..++|++..+
T Consensus 28 ~~L~~~a~~~Al~~a~gi~~~~Id~v~~g-~~~~~~~~~~~~a~~~~~~~Gl~~---~~p~-----~~v~~aCss~l~Al 98 (387)
T 3goa_A 28 EDLSAHLMRSLLARNPSLTAATLDDIYWG-CVQQTLEQGFNIARNAALLAEIPH---SVPA-----VTVNRLCGSSMQAL 98 (387)
T ss_dssp HHHHHHHHHHHHHHCTTSCGGGCCEEEEE-CSCCSBTTTTTHHHHHHHHTTCCT---TSCC-----EEEECGGGHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCHHHcCEEEEE-cccCCcccccHHHHHHHHHcCCCC---CCcE-----eEecCcchHHHHHH
Confidence 345678899999999 9999999987663 333221 1112222222233210 1121 12256778999999
Q ss_pred HHHHHHHHhCC
Q 018323 296 IFAVLAIHHGV 306 (358)
Q Consensus 296 ~~~~~~l~~~~ 306 (358)
..+...++.|.
T Consensus 99 ~~A~~~I~sG~ 109 (387)
T 3goa_A 99 HDAARMIMTGD 109 (387)
T ss_dssp HHHHHHHHTTS
T ss_pred HHHHHHHhCCC
Confidence 99999999875
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=81.56 E-value=3.9 Score=36.55 Aligned_cols=78 Identities=19% Similarity=0.127 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC-CcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHH
Q 018323 220 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPL-GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 298 (358)
Q Consensus 220 ~~~~~~~~~al~~agl~~~did~i~~h~~gt~~-~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~ 298 (358)
.-..++++++|+++|++++|||.+... +.++. ..+.-...+...++.. ...+... + +..+++|+..+..+
T Consensus 67 ~la~~Aa~~al~~ag~~~~~Id~vi~~-t~~~~~~~p~~a~~v~~~lgl~---~~~~~~~----v-~~~C~s~~~al~~A 137 (333)
T 4dfe_A 67 DLAFIASQRAIEAADIDPQSIDLIIVA-TSTPDFVFPSTACLLQNKLGIR---NHGAAFD----V-QAVCSGFAYAVATA 137 (333)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEE-CSSCSSSBSCHHHHHHHHTTCC---SCCEEEE----E-ECGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEE-eCCCCCCCCcHHHHHHHHhCCC---CCCcEEE----e-CcccHHHHHHHHHH
Confidence 456788999999999999999987763 44432 1222233344444431 1122221 2 36778888899889
Q ss_pred HHHHHhCC
Q 018323 299 VLAIHHGV 306 (358)
Q Consensus 299 ~~~l~~~~ 306 (358)
...++.|.
T Consensus 138 ~~~i~~g~ 145 (333)
T 4dfe_A 138 DSFIRSGQ 145 (333)
T ss_dssp HHHHHTTS
T ss_pred HHHHHcCC
Confidence 99998764
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=81.12 E-value=4.5 Score=36.63 Aligned_cols=78 Identities=17% Similarity=0.175 Sum_probs=48.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC-CCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHH
Q 018323 219 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTP-LGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 297 (358)
Q Consensus 219 ~~~~~~~~~~al~~agl~~~did~i~~h~~gt~-~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~ 297 (358)
..-..++++++|+++|++++|||.+..- +.++ ...+.-...+...++.. ..+...+ +..+++|+..+..
T Consensus 75 ~~La~~Aa~~aL~~agl~~~dId~vi~~-t~~~~~~~p~~a~~v~~~lGl~----~~~~~~v-----~~aC~s~~~Al~~ 144 (359)
T 3h78_A 75 SALMVPAARQAIEAAGLLPEDIDLLLVN-TLSPDHHDPSQACLIQPLLGLR----HIPVLDI-----RAQASGLLYGLQM 144 (359)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEEEE-CSSCSSSBSCHHHHHHHHHTCC----SCCEEEE-----ECGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCHHHCCEEEEE-eCCCCCCCCcHHHHHHHHcCCC----CCcEEEE-----CCHhHHHHHHHHH
Confidence 4556789999999999999999987763 3333 11122223333334432 1222211 3567788888888
Q ss_pred HHHHHHhCC
Q 018323 298 AVLAIHHGV 306 (358)
Q Consensus 298 ~~~~l~~~~ 306 (358)
+...++.|.
T Consensus 145 A~~~i~sG~ 153 (359)
T 3h78_A 145 ARGQILAGL 153 (359)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHCCC
Confidence 888888764
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=80.56 E-value=9.7 Score=34.19 Aligned_cols=106 Identities=14% Similarity=0.158 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHH-HHHHHHHH-HhcccCCCCcchh-hhhhhHHHHHHHHHcC
Q 018323 17 YALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDT-VDAAQMIC-EKRLRRLSPFFIP-RILINMASGHVSMKYG 93 (358)
Q Consensus 17 l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~-~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~a~~ia~~lg 93 (358)
.+.+..++.|+|+|++++++| -++.|- .... .+....+. +.+.+ ++..+.- +.+ .++
T Consensus 208 aA~~ti~~~l~d~g~~~~d~D-----~ivtgd----L~q~g~~il~~l~~~~g~~-~~~~~~dcg~~----------iy~ 267 (347)
T 3lma_A 208 AAADTIKQHLEDLGRTPDDYD-----LILTGD----LSGVGSPILKDLLKEEGIN-VGTKHNDCGLM----------IYT 267 (347)
T ss_dssp HHHHHHHHHHHHHTCCGGGCS-----EEEEES----CHHHHHHHHHHHHHHTTCC-CGGGEEEGGGT----------SSC
T ss_pred HHHHHHHHHHHHhCCCHHHcC-----EEecCC----hHHHHHHHHHHHHHHcCCC-hhHCccccceE----------Eec
Confidence 345566999999999999887 555432 1111 11222222 22222 1111110 110 122
Q ss_pred CCCCceeccCCch-hHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHH
Q 018323 94 FQGPNHAAVTACA-TGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA 142 (358)
Q Consensus 94 l~gp~~~v~~~ca-s~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~ 142 (358)
-.-+.+.=.+||+ |+.+--.+-...|+.|+.+.+|++++-..++|..+.
T Consensus 268 ~~~~~~~ggsg~~csa~v~~~~~~~~~~~g~~~ril~~~tGalls~~~~~ 317 (347)
T 3lma_A 268 PDQQVFAGGSGCACSAVVTFAHIFKEIEAGRLNRVLVVATGALLSPTIIQ 317 (347)
T ss_dssp C---------CCCCHHHHHHHTHHHHHHTTSCSEEEEEEEEECCCHHHHH
T ss_pred CCCcccCCCCccccHHHHHHHHHHHHHhcCcccEEEEEecccccCcchhc
Confidence 2223233334565 333334455667999999999999999988888654
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=80.20 E-value=4.8 Score=35.76 Aligned_cols=77 Identities=16% Similarity=0.086 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC-CcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHH
Q 018323 220 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPL-GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 298 (358)
Q Consensus 220 ~~~~~~~~~al~~agl~~~did~i~~h~~gt~~-~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~ 298 (358)
.-..++++++|+++|++++|||.+..- +.++. ..+.-...+...++.. +.+.. .+ ...+++|+..+..+
T Consensus 54 ~La~~Aa~~aL~~ag~~~~~Id~li~~-t~~~~~~~p~~a~~v~~~lGl~----~~~~~----~v-~~aC~s~~~al~~A 123 (321)
T 3il6_A 54 DLCHQVAKQLLEKSGKQASEIDFILVA-TVTPDFNMPSVACQVQGAIGAT----EAFAF----DI-SAACSGFVYALSMA 123 (321)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEE-CSSCSCSSSCHHHHHHHHTTCT----TCEEE----EE-CCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEE-eCCCCcCCCcHHHHHHHHcCCC----CceEE----Ee-CcccHHHHHHHHHH
Confidence 455678999999999999999987763 43321 1111222333334321 12221 12 35677888888888
Q ss_pred HHHHHhCC
Q 018323 299 VLAIHHGV 306 (358)
Q Consensus 299 ~~~l~~~~ 306 (358)
...++.|.
T Consensus 124 ~~~i~~g~ 131 (321)
T 3il6_A 124 EKLVLSGR 131 (321)
T ss_dssp HHHHHTSS
T ss_pred HHHHHCCC
Confidence 88888774
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 358 | ||||
| d2ix4a2 | 161 | c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II | 9e-51 | |
| d1j3na1 | 249 | c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II { | 8e-50 | |
| d1tqya2 | 205 | c.95.1.1 (A:219-423) Actinorhodin polyketide putat | 5e-46 | |
| d2gfva1 | 250 | c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II { | 2e-43 | |
| d2ix4a1 | 270 | c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II | 4e-43 | |
| d2gfva2 | 161 | c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II | 4e-41 | |
| d1e5ma2 | 161 | c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II | 5e-39 | |
| d1j3na2 | 159 | c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II | 3e-38 | |
| d1ox0a1 | 256 | c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II | 9e-37 | |
| d1ox0a2 | 158 | c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II | 3e-35 | |
| d2vbaa1 | 253 | c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {E | 4e-35 | |
| d1e5ma1 | 250 | c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II { | 4e-35 | |
| d2vbaa2 | 151 | c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I | 5e-35 | |
| d1tqyb2 | 194 | c.95.1.1 (B:210-403) Actinorhodin polyketide putat | 6e-34 | |
| d1tqya1 | 216 | c.95.1.1 (A:3-218) Actinorhodin polyketide putativ | 6e-18 | |
| d1tqyb1 | 208 | c.95.1.1 (B:2-209) Actinorhodin polyketide putativ | 2e-14 |
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Score = 164 bits (417), Expect = 9e-51
Identities = 125/160 (78%), Positives = 141/160 (88%)
Query: 197 YAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTV 256
YAE+ GYGMSGDAHHITQP DGKGA+LAMTRAL+QSGL +Q+DYVNAHATSTP+GD V
Sbjct: 1 YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAV 60
Query: 257 EATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKP 316
EA AI+TVFS+HATSG+LAFSSTKGA GHLLGAAGAVEAIF++LAIHHGVAP+TLN+ P
Sbjct: 61 EARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNP 120
Query: 317 DPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
DPIF+ FMPLT SK M + A+SNSFGFGGTNASLLF
Sbjct: 121 DPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 160
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 249 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Score = 165 bits (418), Expect = 8e-50
Identities = 96/187 (51%), Positives = 130/187 (69%), Gaps = 2/187 (1%)
Query: 8 LKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKR 67
L+ + RF+ YAL AA AL DA P D ER G +G GIG + +++ E+
Sbjct: 65 LRRLDRFVQYALIAAQLALEDAGLKPEDL-DPERVGTLVGTGIGGMETWEAQSRVFLERG 123
Query: 68 LRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVM 127
R+SPFFIP ++ NMAS H++M+YGF GP+ VTACATGA ++G A RMIQ G++D++
Sbjct: 124 PNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALGSALRMIQLGEADLV 183
Query: 128 VAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELE 187
+AGGTE++I +++ F RAL+T+ N P++ASRPF RDGFV+GEG+GVLVLE E
Sbjct: 184 LAGGTEAAITPMAIGAFAVMRALSTR-NEEPEKASRPFTLSRDGFVMGEGAGVLVLEAYE 242
Query: 188 HAKKRGA 194
HAKKRGA
Sbjct: 243 HAKKRGA 249
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Score = 153 bits (388), Expect = 5e-46
Identities = 75/200 (37%), Positives = 113/200 (56%), Gaps = 3/200 (1%)
Query: 157 TPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPH 216
P+ ASRPFD RDGFV+ EG+ + VLE+ + A RGA+I+AE+ GY +A+H+T
Sbjct: 2 DPEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLK 61
Query: 217 IDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAF 276
DG+ + AL +S + +DY+NAH + T D E A + +HA
Sbjct: 62 ADGREMAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHA--RRTPV 119
Query: 277 SSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPIS 336
SS K +GH LGA G++E VLA+ HGV P T NL DP + +++PL A ++ +
Sbjct: 120 SSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVPLEA-RERKLR 178
Query: 337 AALSNSFGFGGTNASLLFTK 356
+ L+ GFGG ++++
Sbjct: 179 SVLTVGSGFGGFQSAMVLRD 198
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Score = 148 bits (374), Expect = 2e-43
Identities = 84/186 (45%), Positives = 121/186 (65%), Gaps = 2/186 (1%)
Query: 9 KSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRL 68
+ + FI Y + A +A+ D L + R G +IG GIG + + +
Sbjct: 67 RKMDAFIQYGIVAGVQAMQD-SGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGP 125
Query: 69 RRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMV 128
R++SPFF+P ++NM +GH+++ YG +GP+ + TA +G H+IG AAR+I +GD+DVMV
Sbjct: 126 RKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAQTSGVHNIGHAARIIAYGDADVMV 185
Query: 129 AGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEH 188
AGG E + L + GF +RAL+T+ N PQ ASRP+D RDGFV+G+G+G+LVLEE EH
Sbjct: 186 AGGAEKASTPLGVGGFGAARALSTR-NDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEH 244
Query: 189 AKKRGA 194
AKKRGA
Sbjct: 245 AKKRGA 250
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Score = 148 bits (374), Expect = 4e-43
Identities = 156/185 (84%), Positives = 174/185 (94%)
Query: 12 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRL 71
A FI YA+CAADEAL DA+WLP+++ +KERTGVSIGGGIGSI D V+AAQ+ICEKRLRRL
Sbjct: 86 ANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRL 145
Query: 72 SPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGG 131
SPFFIP+IL+NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDA RMIQFGD+DVMVAGG
Sbjct: 146 SPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGG 205
Query: 132 TESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKK 191
TESSIDALS+AGF +SRAL+TK+N +PQEASRPFDC RDGFVIGEGSGV+VLEE EHAK+
Sbjct: 206 TESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDGFVIGEGSGVIVLEEYEHAKR 265
Query: 192 RGAKI 196
RGAKI
Sbjct: 266 RGAKI 270
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Score = 139 bits (352), Expect = 4e-41
Identities = 82/162 (50%), Positives = 111/162 (68%), Gaps = 2/162 (1%)
Query: 195 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD 254
KIYAE+ G+GMS DA+H+T P +G GA LAM AL+ +G+++ Q+ YVNAH TSTP GD
Sbjct: 1 KIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGD 60
Query: 255 TVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLA 314
EA A++T+F + A+ + SSTK GHLLGAAGAVE+I+++LA+ P T+NL
Sbjct: 61 KAEAQAVKTIFGEAASRVLV--SSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLD 118
Query: 315 KPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
PD + +F+P A + + L NSFGFGGTN SL+F K
Sbjct: 119 NPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 160
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Score = 134 bits (338), Expect = 5e-39
Identities = 77/162 (47%), Positives = 102/162 (62%), Gaps = 3/162 (1%)
Query: 195 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD 254
KIY E+ GY M+ DA+HIT P DG+GA A+ ALK SGL+ V Y+NAH TSTP D
Sbjct: 1 KIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPAND 60
Query: 255 TVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLA 314
E AI+ +HA ++A SSTK GHLLG +G +EA+ V+AI P T+NL
Sbjct: 61 VTETRAIKQALGNHAY--NIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLE 118
Query: 315 KPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
PDP + +++P + + + + ALSNSFGFGG N +L F K
Sbjct: 119 NPDPECDLDYVPGQS-RALIVDVALSNSFGFGGHNVTLAFKK 159
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 159 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Score = 132 bits (332), Expect = 3e-38
Identities = 93/162 (57%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 195 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD 254
+IYAE+ G+G S DAHHIT+PH +GKGA LAM RALK +G+ QV Y+NAH TSTP+GD
Sbjct: 1 RIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGD 60
Query: 255 TVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLA 314
E AI+ VF DHA L SSTK IGHLLGAAGAVEAI V A++HGV P T+NL
Sbjct: 61 RAEVLAIKRVFGDHAK--RLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLE 118
Query: 315 KPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
PDP + +F+P ++ + ALSNSF FGG NA L F +
Sbjct: 119 DPDPELDLDFVPEP--REAKVDYALSNSFAFGGHNAVLAFKR 158
|
| >d1ox0a1 c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Score = 131 bits (330), Expect = 9e-37
Identities = 85/182 (46%), Positives = 116/182 (63%), Gaps = 3/182 (1%)
Query: 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLS 72
+ YAL AA EA++ A L + ++R GV + GIG I + D + EK +R+
Sbjct: 78 NYSLYALYAAQEAVNHA-NLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVK 136
Query: 73 PFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGT 132
P +P+ L NMASG+V+M++G G + TAC++ +IGDA R I+FG DVM+ GGT
Sbjct: 137 PMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGT 196
Query: 133 ESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKR 192
E+SI ++AGF AL+T P AS PFD R+GFV+GEGSG+LVLE LEHA+KR
Sbjct: 197 EASITPFAIAGFQALTALST--TEDPTRASIPFDKDRNGFVMGEGSGMLVLESLEHAEKR 254
Query: 193 GA 194
GA
Sbjct: 255 GA 256
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 158 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Score = 124 bits (312), Expect = 3e-35
Identities = 70/161 (43%), Positives = 93/161 (57%), Gaps = 6/161 (3%)
Query: 196 IYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT 255
I AEV GYG + DA+H+T PH +G+GAI A+ AL+++ + QV YVNAH TSTP +
Sbjct: 2 ILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEK 61
Query: 256 VEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAK 315
E+ AI V + SSTK GHLLGAAGAVEAI + A+ H P+T ++
Sbjct: 62 GESGAIVAVLGKE-----VPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSE 116
Query: 316 PDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
N + + I A+SN+FGFGG NA L F +
Sbjct: 117 VSDYIEANVVYGQG-LEKEIPYAISNTFGFGGHNAVLAFKR 156
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Score = 127 bits (318), Expect = 4e-35
Identities = 66/178 (37%), Positives = 97/178 (54%), Gaps = 2/178 (1%)
Query: 20 CAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMIC-EKRLRRLSPFFIPR 78
+ ++A+ DA P R G+ G G GS V A + + L+ + P+ + +
Sbjct: 77 LSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTK 136
Query: 79 ILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDA 138
+ + S ++ + G N++ +ACAT AH IG+A IQ G D++ AGG E +
Sbjct: 137 AMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEE-LCW 195
Query: 139 LSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKI 196
F AL+TKYN TP++ASR +D RDGFVI G G++V+EELEHA RGA I
Sbjct: 196 EMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHI 253
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Score = 126 bits (318), Expect = 4e-35
Identities = 89/187 (47%), Positives = 124/187 (66%), Gaps = 2/187 (1%)
Query: 8 LKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKR 67
K + RF +A+CA+ +A++DAK + ++ + GV IG GIG + D ++ +K
Sbjct: 66 AKRMDRFCHFAVCASQQAINDAKLVINEL-NADEIGVLIGTGIGGLKVLEDQQTILLDKG 124
Query: 68 LRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVM 127
R SPF IP ++ NMASG ++ G +GPN+ VTACA G+++IGDA R++Q G + M
Sbjct: 125 PSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAM 184
Query: 128 VAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELE 187
+ GGTE++I LS AGF +RAL+ N P ASRPFD RDGFV+GEGSG+L+LEELE
Sbjct: 185 ICGGTEAAITPLSYAGFASARALSF-RNDDPLHASRPFDKDRDGFVMGEGSGILILEELE 243
Query: 188 HAKKRGA 194
A RGA
Sbjct: 244 SALARGA 250
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 151 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Score = 123 bits (309), Expect = 5e-35
Identities = 64/160 (40%), Positives = 91/160 (56%), Gaps = 10/160 (6%)
Query: 197 YAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTV 256
YAE+ GYG + D + P G+GA+ M A+ +DY+N+H TSTP+GD
Sbjct: 1 YAEIVGYGATSDGADMVAPS--GEGAVRCMKMAMHG---VDTPIDYLNSHGTSTPVGDVK 55
Query: 257 EATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKP 316
E AIR VF D + A S+TK GH LGAAG EAI+++L + HG ++N+ +
Sbjct: 56 ELAAIREVFGDKS----PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEEL 111
Query: 317 DPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356
D + T + D ++ +SNSFGFGGTNA+L+ K
Sbjct: 112 DEQAAGLNIV-TETTDRELTTVMSNSFGFGGTNATLVMRK 150
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 194 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Score = 121 bits (305), Expect = 6e-34
Identities = 51/200 (25%), Positives = 77/200 (38%), Gaps = 9/200 (4%)
Query: 158 PQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAK-IYAEVRGYGMSGDAHHITQPH 216
P A PFD G+V GEG +LVLE+ A+ RG Y E+ G + D
Sbjct: 2 PDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAP---GS 58
Query: 217 IDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAF 276
G A+ AL +G VD V A P D EA AI VF
Sbjct: 59 GRPAGLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARAIGRVFGREGVP----V 114
Query: 277 SSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPIS 336
+ K G L G ++ + A++++ GV T + + + + +
Sbjct: 115 TVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGIDLVL-GEPRSTAPR 173
Query: 337 AALSNSFGFGGTNASLLFTK 356
AL + G G N++ + +
Sbjct: 174 TALVLARGRWGFNSAAVLRR 193
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 216 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Score = 79.3 bits (194), Expect = 6e-18
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 7/147 (4%)
Query: 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMIC------EK 66
R +A+ A EA + P D R GVS+G + + + ++ E
Sbjct: 70 RASQFAVACAREAFAASGLDP-DTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEV 128
Query: 67 RLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDV 126
LS ++ ++ V+ G +GP T C +G S+G+A R I+ G +DV
Sbjct: 129 DAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADV 188
Query: 127 MVAGGTESSIDALSMAGFCKSRALTTK 153
M AG ++ I + +A F RA T +
Sbjct: 189 MFAGAADTPITPIVVACFDAIRATTAR 215
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Score = 69.3 bits (168), Expect = 2e-14
Identities = 26/122 (21%), Positives = 53/122 (43%), Gaps = 1/122 (0%)
Query: 31 WLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM 90
+ GV G T + + + + +S + + +G +S+
Sbjct: 86 KADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISI 145
Query: 91 KYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRAL 150
++G +GP+ A V A G ++G A R I+ G + ++V+GG +S++D S +
Sbjct: 146 RHGMRGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRI 204
Query: 151 TT 152
+T
Sbjct: 205 ST 206
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 358 | |||
| d1tqya2 | 205 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d1tqyb2 | 194 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d1e5ma2 | 161 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 100.0 | |
| d1ox0a2 | 158 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 100.0 | |
| d2ix4a2 | 161 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 100.0 | |
| d2gfva2 | 161 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 100.0 | |
| d1j3na2 | 159 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 100.0 | |
| d1j3na1 | 249 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 100.0 | |
| d2gfva1 | 250 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 100.0 | |
| d1ox0a1 | 256 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 100.0 | |
| d2vbaa2 | 151 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 100.0 | |
| d1e5ma1 | 250 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 100.0 | |
| d2vbaa1 | 253 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 99.97 | |
| d2ix4a1 | 270 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 99.97 | |
| d1tqyb1 | 208 | Actinorhodin polyketide putative beta-ketoacyl syn | 99.92 | |
| d1tqya1 | 216 | Actinorhodin polyketide putative beta-ketoacyl syn | 99.9 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 99.72 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 99.53 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 99.53 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 99.52 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 99.51 | |
| d1afwa2 | 124 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 99.49 | |
| d1ulqa2 | 125 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 99.47 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 99.45 | |
| d1wdkc2 | 128 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 99.43 | |
| d1ulqa1 | 273 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 99.42 | |
| d1m3ka1 | 268 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 99.41 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 99.39 | |
| d1wdkc1 | 262 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 99.32 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 99.3 | |
| d1afwa1 | 269 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 99.27 | |
| d1xpma1 | 166 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 98.98 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 97.41 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 97.15 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 97.13 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 96.53 | |
| d1u0ma2 | 148 | Putative polyketide synthase SCO1206 {Streptomyces | 95.79 | |
| d1bi5a2 | 154 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 94.73 | |
| d1ee0a2 | 160 | Pyrone synthase (PyS, chalcone synthase 2) {Gerber | 94.55 | |
| d1u0ua2 | 156 | Dihydropinosylvin synthase {Scots pine (Pinus sylv | 93.42 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 90.11 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 88.46 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 86.27 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 85.37 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 85.21 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 82.09 | |
| d1m3ka1 | 268 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 80.81 |
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=3.8e-48 Score=330.17 Aligned_cols=199 Identities=37% Similarity=0.631 Sum_probs=188.4
Q ss_pred CCCCCCCCCcCCCCceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCC
Q 018323 157 TPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQ 236 (358)
Q Consensus 157 ~~~~~~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~ 236 (358)
+|++.|||||.+++||++|||++++||++.+.|+++|.++|++|.|++.++++.+.+.+.++...+.++++++|++++++
T Consensus 2 ~P~~~~rpFD~~adG~v~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~a~i~ 81 (205)
T d1tqya2 2 DPEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTD 81 (205)
T ss_dssp CGGGCCCTTBTTCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCCCCCCCccCCCCCEeeEeeEEEEEEeEHHHHHHCCCceEEEEEeeEccccccccCcccccccccchhhhhHHhhhcCC
Confidence 58899999999999999999999999999999999999999999999999999988888888889999999999999999
Q ss_pred CCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCC
Q 018323 237 SHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKP 316 (358)
Q Consensus 237 ~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~ 316 (358)
++||+|||+|||||+.+|.+|..++.++|+... .+++|+++|+++||+++|||++++++++++|++++|||++|++++
T Consensus 82 ~~~i~~ie~hgtGt~~~D~~E~~ai~~~~~~~~--~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~ 159 (205)
T d1tqya2 82 ATDIDYINAHGSGTRQNDRHETAAYKRALGEHA--RRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTS 159 (205)
T ss_dssp GGGCCEEECCCCCCHHHHHHHHHHHHHHTGGGG--GGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSB
T ss_pred ccceeeeeccccccccCchhHHHHHHHhhcccc--CCceeeeecccccccccccchhHHHHHHHHHhCCeEcccCCCCCC
Confidence 999999999999999999999999999998654 468999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 317 DPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
+|++++++++ .+.+..+.+++++|+|||||+|+|+||++++
T Consensus 160 ~p~~~~~~v~-~~~~~~~~~~a~~~s~GfGG~na~~vl~~~~ 200 (205)
T d1tqya2 160 DPECDLDYVP-LEARERKLRSVLTVGSGFGGFQSAMVLRDAE 200 (205)
T ss_dssp BTTBCSCCCB-SSCEECCCSEEEEEEEETTTEEEEEEEECHH
T ss_pred CCCCCcccCC-CCCcCCCCCEEEEeCCCCCceeEEEEEeeCC
Confidence 9999999888 4566778899999999999999999999864
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=5.9e-47 Score=319.52 Aligned_cols=192 Identities=27% Similarity=0.382 Sum_probs=177.5
Q ss_pred CCCCCCCCcCCCCceeeecceEEEEeccHHHHHhcCC-eeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCC
Q 018323 158 PQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGA-KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQ 236 (358)
Q Consensus 158 ~~~~~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~-~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~ 236 (358)
|+..|||||.+++||++|||++++|||+++.|+++|+ ++|++|.|++.++|+.+... .+ .+++++|+++|++++++
T Consensus 2 p~~~~rPFD~~a~G~~~gEGa~~~vLe~~~~A~~rg~~~i~a~i~g~~~~~d~~~~~~-~~--~g~~~~i~~aL~~a~i~ 78 (194)
T d1tqyb2 2 PDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSG-RP--AGLERAIRLALNDAGTG 78 (194)
T ss_dssp GGGSCCTTSTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCC-CC--CSHHHHHHHHHHHHTCC
T ss_pred CCCCcCcccCCCCCEeeEeeEEEEEEeEHHHHHhcCCceeeeeeeccccccccccccc-ch--hhhhhhhhhhccccccc
Confidence 7789999999999999999999999999999999997 59999999999998865432 22 34778999999999999
Q ss_pred CCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCC
Q 018323 237 SHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKP 316 (358)
Q Consensus 237 ~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~ 316 (358)
++||+|||+|||||+.+|.+|..++.++|+.. .++++++|+++||+++|||++++++++++|++++|||++|++++
T Consensus 79 ~~di~~v~ahgtGt~~~D~~E~~al~~~f~~~----~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~ 154 (194)
T d1tqyb2 79 PEDVDVVFADGAGVPELDAAEARAIGRVFGRE----GVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSV 154 (194)
T ss_dssp GGGCCEEECCCCCSHHHHHHHHHHHHHHHCTT----CSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCC
T ss_pred ccceeeeeccccCcccccHHHhhhhhhhhhcc----ccccccccccccccccccccceehhhhhhhhhceeccccCCCCC
Confidence 99999999999999999999999999999764 48999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 317 DPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
+|++++++++ .+++..+.+++++|+|||||+|+|+||+||
T Consensus 155 ~~~~~~~~v~-~~~~~~~~~~a~v~s~GfgG~na~~vl~~~ 194 (194)
T d1tqyb2 155 PREYGIDLVL-GEPRSTAPRTALVLARGRWGFNSAAVLRRF 194 (194)
T ss_dssp CGGGCCEECB-SSCBCCCCSEEEEEEEETTTEEEEEEEEEC
T ss_pred CcccCccccC-CCCccCCCCEEEEECcCCCceeEEEEEeeC
Confidence 9999888877 666778899999999999999999999998
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=100.00 E-value=1.4e-40 Score=271.94 Aligned_cols=161 Identities=49% Similarity=0.773 Sum_probs=152.7
Q ss_pred eeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCc
Q 018323 195 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSL 274 (358)
Q Consensus 195 ~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~ 274 (358)
+||++|+|++.++|+.+.+.|++++.++.+++++||++++++|+||+|||+|||||+.+|.+|..+++++|+... .++
T Consensus 1 rIya~i~G~~~~~Dg~~~~~~~p~g~~~~~~i~~Al~~a~i~~~~i~~v~~HgtGT~~~D~~E~~al~~vf~~~~--~~~ 78 (161)
T d1e5ma2 1 KIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHA--YNI 78 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGG--GGS
T ss_pred CEEEEEeeEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHcCCChhhcceEEEeccCCcccchHHhhhhhhccccCC--Ccc
Confidence 589999999999999999999999999999999999999999999999999999999999999999999998654 468
Q ss_pred ceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEe
Q 018323 275 AFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLF 354 (358)
Q Consensus 275 ~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il 354 (358)
+|++.|+++||+++|||++++++++++|++++|||++|+++|+|.++...++ .+.+..+.+++++|||||||+|+|+||
T Consensus 79 ~v~s~K~~~GH~~~AsG~~~l~~~l~~~~~g~ipp~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~nsfGfGG~Na~lvl 157 (161)
T d1e5ma2 79 AVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVP-GQSRALIVDVALSNSFGFGGHNVTLAF 157 (161)
T ss_dssp EEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCB-SSCEECCCSEEEEEEEETTTEEEEEEE
T ss_pred eEEecccccccccccchhhHHHHhHHhcccCeeCCccCCCCCCCCCCcccCc-CcccCCCCCEEEEeCcCcCcEeEEEEE
Confidence 9999999999999999999999999999999999999999999999998887 566777899999999999999999999
Q ss_pred eecC
Q 018323 355 TKCQ 358 (358)
Q Consensus 355 ~~~~ 358 (358)
+||+
T Consensus 158 ~~y~ 161 (161)
T d1e5ma2 158 KKYQ 161 (161)
T ss_dssp ECCC
T ss_pred eeeC
Confidence 9996
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=1.8e-40 Score=270.20 Aligned_cols=158 Identities=44% Similarity=0.653 Sum_probs=150.9
Q ss_pred eeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCc
Q 018323 195 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSL 274 (358)
Q Consensus 195 ~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~ 274 (358)
+||++|+|++.++|+.+.+.|++++.++.++++++|++++++|+|||||++|||||+.+|..|..++.++|++ ++
T Consensus 1 tIyaei~G~~~~~Dg~~~~~p~p~g~~~~~~~~~al~~a~l~p~~i~~v~aHgtgT~~~D~~E~~ai~~~fg~-----~~ 75 (158)
T d1ox0a2 1 TILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGK-----EV 75 (158)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHCS-----SS
T ss_pred CEEEEEEEEEEcCCCCCCcCCCCCHHHHHHHHHHhhccccccceeeeEEeeeccccccchhHHHHHHHHhcCC-----cc
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999975 38
Q ss_pred ceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEe
Q 018323 275 AFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLF 354 (358)
Q Consensus 275 ~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il 354 (358)
++++.|+++||+++|||++++++++++|++++|||++|+++++|.++++.++ .+.+..+.+++++|||||||+|+|+||
T Consensus 76 ~v~s~Ks~iGH~~~asG~~~l~~~l~~l~~g~iPp~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~nsfGfGG~Na~lvl 154 (158)
T d1ox0a2 76 PVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVY-GQGLEKEIPYAISNTFGFGGHNAVLAF 154 (158)
T ss_dssp EEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECB-SSCEECCCSEEEEEEEETTTEEEEEEE
T ss_pred cCcCcccccccchhhhhhhhhcccccccccceeccccCCCCCCcccCccccc-CccccCCCCEEEEeCcCCCcEeEEEEE
Confidence 9999999999999999999999999999999999999999999999998888 566677889999999999999999999
Q ss_pred eecC
Q 018323 355 TKCQ 358 (358)
Q Consensus 355 ~~~~ 358 (358)
+||+
T Consensus 155 ~~~~ 158 (158)
T d1ox0a2 155 KRWE 158 (158)
T ss_dssp ECCC
T ss_pred EecC
Confidence 9996
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=100.00 E-value=1.9e-39 Score=265.37 Aligned_cols=161 Identities=78% Similarity=1.179 Sum_probs=152.0
Q ss_pred eEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcce
Q 018323 197 YAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAF 276 (358)
Q Consensus 197 ~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v 276 (358)
|++|+|++.++|+.+++.|++++..+.++++++|++++++|+||||||+|||||+.+|.+|..+++++|+......++++
T Consensus 1 Y~~i~G~~~~~Dg~~~t~p~~~g~~~~~~~~~al~~a~~~~~di~yveaHGtGT~~gD~~E~~al~~~~~~~~~~~~~~i 80 (161)
T d2ix4a2 1 YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAF 80 (161)
T ss_dssp CEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEE
T ss_pred CeEEEEEEEcCCCCCCcCCChhHHHHHHHHHHHHHhcCCCccccCEEEEeccCCCCCcHHHHhhhHhhhcccccccceee
Confidence 78999999999999999999999999999999999999999999999999999999999999999999987554467899
Q ss_pred ecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 277 SSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 277 ~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
++.|+++||+++|||++++++++++|+++.+||++|+++|+|.++...+++...++...+++++|+|||||+|+|+||++
T Consensus 81 ~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfgG~Na~lvl~~ 160 (161)
T d2ix4a2 81 SSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 160 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred eccccccCCccchHHHHHHHHHHHHHhcCCCCCccCCCCCCcccCcccCccccCCCCCcCEEEEeCCcccceeEEEEEEe
Confidence 99999999999999999999999999999999999999999999988887777777789999999999999999999997
Q ss_pred c
Q 018323 357 C 357 (358)
Q Consensus 357 ~ 357 (358)
.
T Consensus 161 ~ 161 (161)
T d2ix4a2 161 I 161 (161)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=7.4e-39 Score=261.99 Aligned_cols=161 Identities=51% Similarity=0.814 Sum_probs=148.9
Q ss_pred eeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCc
Q 018323 195 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSL 274 (358)
Q Consensus 195 ~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~ 274 (358)
+||++|+|++.++|+.+.+.|++++.++.++++++|++++++|+||||||+|||||+.+|.+|..++.++|+... .++
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~a~i~p~~i~~ie~HgtGT~~gD~~E~~Al~~~f~~~~--~~~ 78 (161)
T d2gfva2 1 KIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAA--SRV 78 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGG--TTS
T ss_pred CEEEEEeeEEEeCCCCCCCCCCCCHHHHHHHHHHhHhhcccCcceEEEEEeecccCcccHHHHHHHHHHHhcccc--ccc
Confidence 589999999999999999999999999999999999999999999999999999999999999999999998754 568
Q ss_pred ceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEe
Q 018323 275 AFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLF 354 (358)
Q Consensus 275 ~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il 354 (358)
++++.|+++||+++|||++++++++++|++++|||++|+++|++.+.....+....+..+.+++++|+|||||+|+|+||
T Consensus 79 ~i~s~Ks~~GH~~~AsG~~~li~~ll~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~vnsfGfgG~Na~lil 158 (161)
T d2gfva2 79 LVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIF 158 (161)
T ss_dssp EEECTHHHHCBCGGGHHHHHHHHHHHHHHSCEECCBTTCSSBCTTCCSBCCBSSCEECSSCCEEEEEEEEGGGEEEEEEE
T ss_pred eeccccccccccHHHHHHHHHHHHHHHhcCCEecccccccccccccccccccccCccCCCCcEEEEeCcCccceeEEEEE
Confidence 99999999999999999999999999999999999999999999988776663444445679999999999999999999
Q ss_pred eec
Q 018323 355 TKC 357 (358)
Q Consensus 355 ~~~ 357 (358)
+|.
T Consensus 159 ~~~ 161 (161)
T d2gfva2 159 KKI 161 (161)
T ss_dssp ECC
T ss_pred EEC
Confidence 974
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=6.1e-39 Score=261.79 Aligned_cols=159 Identities=58% Similarity=0.918 Sum_probs=149.4
Q ss_pred eeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCc
Q 018323 195 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSL 274 (358)
Q Consensus 195 ~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~ 274 (358)
+||++|+|++.++|+.+.+.|++++.++.++++++|+++|++|+||||||+|||||+.+|.+|..++.++|+... .++
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~agi~p~~I~~ie~HgtGT~~gD~~E~~Al~~~f~~~~--~~~ 78 (159)
T d1j3na2 1 RIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHA--KRL 78 (159)
T ss_dssp CCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHH--TTC
T ss_pred CEEEEEeEEEEeCCCCCCCCCCcCHHHHHHHhhccHhhcCCCHHHcCeEeccccCCccchHHHHHHHHHHHHhcC--CCc
Confidence 589999999999999999999999999999999999999999999999999999999999999999999997654 468
Q ss_pred ceecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEe
Q 018323 275 AFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLF 354 (358)
Q Consensus 275 ~v~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il 354 (358)
+|++.|+++||+++|||++++++++++|++++|||++|++++++++++..++ +++..+.+++++|+|||||+|+|+||
T Consensus 79 ~i~s~K~~~GH~~~asG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~--~~~~~~~~~a~v~sfGfgG~Na~~vl 156 (159)
T d1j3na2 79 MVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVP--EPREAKVDYALSNSFAFGGHNAVLAF 156 (159)
T ss_dssp EEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCS--SCEECCCSEEEEEEECTTSEEEEEEE
T ss_pred eEecccccccccccccccchhhhhhhHhhCCEeccccccccccceeeeeccC--cccCCCCCEEEEeCCCCCceeEEEEE
Confidence 9999999999999999999999999999999999999999999999988887 34556789999999999999999999
Q ss_pred eec
Q 018323 355 TKC 357 (358)
Q Consensus 355 ~~~ 357 (358)
+|.
T Consensus 157 ~kv 159 (159)
T d1j3na2 157 KRV 159 (159)
T ss_dssp ECC
T ss_pred EEC
Confidence 984
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.8e-35 Score=260.31 Aligned_cols=190 Identities=51% Similarity=0.861 Sum_probs=177.4
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 82 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (358)
.++.+.|++||++++++.++++||+|||+++++++ .+|+||++|++.++......+.....+.+...++|+.++..+.|
T Consensus 60 ~~~~~~~~~d~~~~~~l~aa~~Al~dAGl~~~~~~-~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (249)
T d1j3na1 60 LDRKELRRLDRFVQYALIAAQLALEDAGLKPEDLD-PERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIAN 138 (249)
T ss_dssp SCHHHHTTSCHHHHHHHHHHHHHHHHHTCCGGGSC-GGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTT
T ss_pred ccHHHHhhCCHHHHHHHHHHHHHHHHcCCChhHcC-CccEEEEEEECCCcccccccccccccccCccccChhhhccccch
Confidence 45677899999999999999999999999988774 78999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCC
Q 018323 83 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 162 (358)
Q Consensus 83 ~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 162 (358)
.++++|++.||++||+++|+++|+|++.||.+|+++|++|++|++||+|+|...+|..+..|...+.++.. ...|++.|
T Consensus 139 ~~~~~is~~~gl~Gp~~tv~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~~p~~~~~f~~~~~ls~~-~~~p~~~~ 217 (249)
T d1j3na1 139 MASAHIAMRYGFTGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTR-NEEPEKAS 217 (249)
T ss_dssp HHHHHHHHHHTCCSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-TTCHHHHC
T ss_pred hhhhhhHhhcCCCCCccccccccchHHHHHHHHHHHHHcCCCCeeeecchHhhhCcHHHHHHHhCCcccCC-CCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999998999999999999998754 33456789
Q ss_pred CCCcCCCCceeeecceEEEEeccHHHHHhcCC
Q 018323 163 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGA 194 (358)
Q Consensus 163 ~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~ 194 (358)
+|||.+++|+++|||++++|||++++|+++|+
T Consensus 218 rPFd~~~dG~v~gEGa~~lvLe~~~~A~~rGA 249 (249)
T d1j3na1 218 RPFTLSRDGFVMGEGAGVLVLEAYEHAKKRGA 249 (249)
T ss_dssp CTTBTTCCCBCBBCEEEEEEEEEHHHHHHTTC
T ss_pred CCccCCCCCEeeEeEEEEEEEccHHHHHHCcC
Confidence 99999999999999999999999999999984
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.5e-35 Score=259.55 Aligned_cols=191 Identities=43% Similarity=0.781 Sum_probs=178.3
Q ss_pred CccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhh
Q 018323 2 RTRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILI 81 (358)
Q Consensus 2 ~~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (358)
.+++++.++|||+++|++.++++||+|||++.++. +..++||++|++.+.....+..+..+...+...++|..++.+++
T Consensus 60 ~~~~~~~~~~d~~~~~~l~aa~~Al~dAg~~~~~~-~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (250)
T d2gfva1 60 IISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEE-NATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIV 138 (250)
T ss_dssp TSCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCTT-TGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHST
T ss_pred hhhhHHHhhcCHHHHHHHHHHHHHHHhcCCCcccc-CccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhh
Confidence 35677899999999999999999999999988776 48899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCC
Q 018323 82 NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 161 (358)
Q Consensus 82 ~~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 161 (358)
|.++++|++.||++||+++|+++|+|++.||.+|+++|++|++|++||+|+|..++|..+..|...+.++.. +..|+..
T Consensus 139 ~~~a~~ia~~~gl~Gp~~tv~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~-~~~p~~~ 217 (250)
T d2gfva1 139 NMVAGHLTIMYGLRGPSISIATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTR-NDNPQAA 217 (250)
T ss_dssp THHHHHHHHHTTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-TTCHHHH
T ss_pred hHHHHHHHHHhCCCCCccccccccchhhhhhHHHHHHHHcCCcchhhcccchhhcCcHHHHHHHhcccccCC-CCCCCCc
Confidence 999999999999999999999999999999999999999999999999999998999999999999999854 3446678
Q ss_pred CCCCcCCCCceeeecceEEEEeccHHHHHhcCC
Q 018323 162 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGA 194 (358)
Q Consensus 162 ~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~ 194 (358)
|||||++++|+++|||+++||||++++|+++|+
T Consensus 218 ~rPFD~~rdG~v~gEGaa~lVLE~~~~A~~rGA 250 (250)
T d2gfva1 218 SRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGA 250 (250)
T ss_dssp CCTTBTTCCSBCBBCEEEEEEEEEHHHHHHHTC
T ss_pred cCCCCCCCCCEeeeeEEEEEEECcHHHHHHCcC
Confidence 999999999999999999999999999999884
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.2e-35 Score=239.54 Aligned_cols=151 Identities=43% Similarity=0.704 Sum_probs=137.0
Q ss_pred eEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcce
Q 018323 197 YAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAF 276 (358)
Q Consensus 197 ~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v 276 (358)
|++|+|++.++|+.+++.| +..++.++++++|+++ ++||||||+|||||+.+|.+|..++.++|+.. .++|
T Consensus 1 Yaei~G~g~~~Dg~~~taP--~~~~~~~~~~~al~~a---~~~I~~v~aHgtGT~~gD~~E~~Al~~vfg~~----~~~v 71 (151)
T d2vbaa2 1 YAEIVGYGATSDGADMVAP--SGEGAVRCMKMAMHGV---DTPIDYLNSHGTSTPVGDVKELAAIREVFGDK----SPAI 71 (151)
T ss_dssp CEEEEEEEEEECCSCTTSC--CSHHHHHHHHHHHTTC---CSCCCEEECCCCSCHHHHHHHHHHHHHHHTTC----CCEE
T ss_pred CEEEEEEEEecCCCCCCCc--CHHHHHHHHHHhhhcC---cccceeEEEeccCCccccHHHHHHHHHHhCCC----Cccc
Confidence 7899999999999988877 5678899999999876 57899999999999999999999999999764 4789
Q ss_pred ecccCCcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 277 SSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 277 ~~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
++.|+++||+++|||++++++++++|+++++||++|++++++++....++ .+.+..+.+++++|||||||+|+|+||+|
T Consensus 72 ~s~K~~~GH~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v~-~~~~~~~~~~a~~nsfGfGG~Na~~vl~~ 150 (151)
T d2vbaa2 72 SATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIV-TETTDRELTTVMSNSFGFGGTNATLVMRK 150 (151)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSEEC-CSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred ccchhhccccccchhhhhhhHHHHHHHcCCcccccCcccccccccccccc-CcCcCCCCCEEEEeCCcccceeEEEEEEE
Confidence 99999999999999999999999999999999999999999987655554 45566788999999999999999999998
Q ss_pred c
Q 018323 357 C 357 (358)
Q Consensus 357 ~ 357 (358)
.
T Consensus 151 v 151 (151)
T d2vbaa2 151 L 151 (151)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=100.00 E-value=2.7e-33 Score=246.61 Aligned_cols=191 Identities=47% Similarity=0.774 Sum_probs=179.1
Q ss_pred CccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhh
Q 018323 2 RTRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILI 81 (358)
Q Consensus 2 ~~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (358)
..+++..+++||+++++++++.+||++||++++.+ ..+++++++|++.+...........+.+++.....++.++..+.
T Consensus 60 ~~~~~~~~~~d~~~~~~~~a~~~Al~~Agl~~~~~-~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (250)
T d1e5ma1 60 FLDRKEAKRMDRFCHFAVCASQQAINDAKLVINEL-NADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIA 138 (250)
T ss_dssp TSCHHHHHTSCHHHHHHHHHHHHHHHHHTCCCCTT-TGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHST
T ss_pred ccchhhhhhcCcHHHHHHHHHHHHHHHcCCChHhh-cCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhc
Confidence 46778899999999999999999999999998776 48899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCC
Q 018323 82 NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 161 (358)
Q Consensus 82 ~~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 161 (358)
+.++.+|++.||++||+++++++|+|++.||.+|+++|++|++|++||+|+|...++..+..|...+.++.. +.+|+..
T Consensus 139 ~~~a~~is~~~gl~Gp~~tv~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~~~~~~~~~f~~~~~ls~~-~~~p~~~ 217 (250)
T d1e5ma1 139 NMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFR-NDDPLHA 217 (250)
T ss_dssp THHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-TTCGGGT
T ss_pred chhhhhHHHhccCCCCCccccccchhhhhhhHHHhhcccCCcccccccccchhhcCcHHHHHHHhcCCccCC-CCCCCCc
Confidence 999999999999999999999999999999999999999999999999999998999999999999988753 4557788
Q ss_pred CCCCcCCCCceeeecceEEEEeccHHHHHhcCC
Q 018323 162 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGA 194 (358)
Q Consensus 162 ~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~ 194 (358)
|||||++++|+++|||+++||||++++|+++|+
T Consensus 218 ~rPFD~~~dG~~~gEGa~~~vLe~l~~A~~rGA 250 (250)
T d1e5ma1 218 SRPFDKDRDGFVMGEGSGILILEELESALARGA 250 (250)
T ss_dssp CCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTC
T ss_pred cCCCCCCCCCEeeEeeEEEEEEeeHHHHHHCcC
Confidence 999999999999999999999999999999984
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=3.5e-31 Score=233.38 Aligned_cols=193 Identities=35% Similarity=0.547 Sum_probs=170.0
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHH-HHhcccCCCCcchhhhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMI-CEKRLRRLSPFFIPRILI 81 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 81 (358)
.+....|.+++..++...++.+|++++|+..+...+.+++|+++|+..+...........+ .+++...++|+.++....
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (253)
T d2vbaa1 60 IDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMA 139 (253)
T ss_dssp SCHHHHTTCCHHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHST
T ss_pred ccchhhccchhhhhhhhHHHHHHHHHhhccchhccCCCCEEEEeccccccccccccccccccccCCccccCchhhhcccc
Confidence 3456788899999999999999999999976554457899999999998877665554433 344567788999999999
Q ss_pred hHHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCC
Q 018323 82 NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 161 (358)
Q Consensus 82 ~~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 161 (358)
+.++++|++.||++||+++++++|+|++.||.+|+++|++|++|++||+|+|.. .+.....+...+.++.....+|+..
T Consensus 140 ~~~a~~is~~~g~~Gp~~~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~~-~~~~~~~~~~~~~ls~~~~~~P~~~ 218 (253)
T d2vbaa1 140 SGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEEL-CWEMACEFDAMGALSTKYNDTPEKA 218 (253)
T ss_dssp THHHHHHHTTTTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECC-CHHHHHHHHHTTCBCCSCTTSGGGS
T ss_pred ccccceeccccCcccceeeeeccchhHHHHHHHHHHhcchhccceeeecchhhh-hcchhhhHHHHHHHhcCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999975 5555677888888888777788999
Q ss_pred CCCCcCCCCceeeecceEEEEeccHHHHHhcCCee
Q 018323 162 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKI 196 (358)
Q Consensus 162 ~~pf~~~~~g~~~geGaaa~vL~~~~~A~~~g~~~ 196 (358)
|||||.+++|+++|||++++|||++++|+++|++|
T Consensus 219 ~rPFD~~~~G~v~gEGa~~lvLe~le~A~~rGa~I 253 (253)
T d2vbaa1 219 SRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHI 253 (253)
T ss_dssp CCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCC
T ss_pred CCCCCCCCCCEeeeeEEEEEEEccHHHHHHccCcC
Confidence 99999999999999999999999999999999875
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=99.97 E-value=7e-30 Score=226.97 Aligned_cols=189 Identities=83% Similarity=1.325 Sum_probs=171.4
Q ss_pred hccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHH
Q 018323 8 LKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGH 87 (358)
Q Consensus 8 ~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 87 (358)
.+++++....+..+..+|+.++++...+.....++++.+....+.....................|+.+++.+.+.++++
T Consensus 82 ~~~~~~~~~~a~~a~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 161 (270)
T d2ix4a1 82 SKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGH 161 (270)
T ss_dssp STTCCHHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHH
T ss_pred hhhhhhhHHHHHHHHHHHHHHhhhccccccccccceEEeeccccccccchhhcchhhhccccccCcccCcccccchhHHH
Confidence 45677888889999999999999865433334567888888888877777777777888888999999999999999999
Q ss_pred HHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcC
Q 018323 88 VSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC 167 (358)
Q Consensus 88 ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~ 167 (358)
|+++||++||+++|+++|+|++.||.+|+++|++|++|++||+|+|....|..+..+...+.++.....+|+..|||||.
T Consensus 162 is~~~~l~Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~~p~~~~~~~~~~~ls~~~~~~p~~~~rPFD~ 241 (270)
T d2ix4a1 162 VSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDC 241 (270)
T ss_dssp HHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSCCTTBT
T ss_pred HHHHhCCCCCCcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhhhhhhHHHHHhcccccCCCCCCCCCccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998777788999999999
Q ss_pred CCCceeeecceEEEEeccHHHHHhcCCee
Q 018323 168 GRDGFVIGEGSGVLVLEELEHAKKRGAKI 196 (358)
Q Consensus 168 ~~~g~~~geGaaa~vL~~~~~A~~~g~~~ 196 (358)
+++|+++|||++++|||++++|+++|++|
T Consensus 242 ~a~G~v~gEGaa~~vLe~l~~A~~rG~~I 270 (270)
T d2ix4a1 242 DRDGFVIGEGSGVIVLEEYEHAKRRGAKI 270 (270)
T ss_dssp TCCSBCBBCEEEEEEEEEHHHHHHTTCCC
T ss_pred CCCCEeeEeeEEEEEEeeHHHHHHccCCC
Confidence 99999999999999999999999999875
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.92 E-value=6e-25 Score=187.32 Aligned_cols=148 Identities=26% Similarity=0.351 Sum_probs=140.7
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhh
Q 018323 3 TRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 82 (358)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (358)
.++++.|+|||++++++.++++||+|||+++.++ +..++++++|++.++....+..+..+.....+.+.|+.++.++.|
T Consensus 59 ~~~~~~~~~~~~~~~~~~a~~~Al~~Ag~~~~~~-~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 137 (208)
T d1tqyb1 59 IPGRLLPQTDPSTRLALTAADWALQDAKADPESL-TDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYA 137 (208)
T ss_dssp SCTTTGGGCCHHHHHHHHHHHHHHHHTTCCGGGS-CGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTT
T ss_pred CChhHhhccccccccccccccccchhhhcccccc-cccccccccccccccccccchhhhhhccccccccccccccccccc
Confidence 5778899999999999999999999999998776 478999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhccccc
Q 018323 83 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTT 152 (358)
Q Consensus 83 ~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~ 152 (358)
+.+++|++.||++||+++++++|+|++.||..|+++|++| +|++||+|+|..++|..+..|..++.|+.
T Consensus 138 ~~a~~ia~~~gl~Gp~~tv~tACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~l~p~~~~~f~~~~~lSt 206 (208)
T d1tqyb1 138 VNTGQISIRHGMRGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIST 206 (208)
T ss_dssp HHHHHHHHHHTCCSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCC
T ss_pred cccchhhhcccccceeeeccccccHHHHHHHHHHHHHHcC-CCEEEECccccccCHHHHHHHHHcCCCCC
Confidence 9999999999999999999999999999999999999999 99999999999999999999999999873
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.90 E-value=1.2e-23 Score=180.23 Aligned_cols=150 Identities=25% Similarity=0.386 Sum_probs=138.3
Q ss_pred CccchhhccCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcc------cCCCCcc
Q 018323 2 RTRGLILKSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRL------RRLSPFF 75 (358)
Q Consensus 2 ~~~~~~~~~~~~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~------~~~~~~~ 75 (358)
.+++++.++|++.++|++.|+++||+|||++++++. ..+++++++++.+........+..+.+.+. ..+.++.
T Consensus 59 ~~~~~~~~~~~~~~~~~l~aa~~Al~dAg~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (216)
T d1tqya1 59 GFGPRELDRMDRASQFAVACAREAFAASGLDPDTLD-PARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHM 137 (216)
T ss_dssp TCCHHHHHHSCHHHHHHHHHHHHHHHHHTCCTTTCC-GGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTT
T ss_pred ccChhhhcccCcchhhHHHHHHHHHHHhcCCccccc-cccccccccccccccchhhHHHhhhhhcccccccchhhccccc
Confidence 467889999999999999999999999999987774 789999999999999999888888777643 4567788
Q ss_pred hhhhhhhHHHHHHHHHcCCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhccccc
Q 018323 76 IPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTT 152 (358)
Q Consensus 76 ~~~~~~~~~a~~ia~~lgl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~ 152 (358)
++..+++.++.+|++.||++||+++++++|+|++.||.+|+++|++|++|++||||+|..++|..+..|..+++|+.
T Consensus 138 ~~~~~~~~~a~~ia~~~g~~Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~l~p~~~~~F~~~~alS~ 214 (216)
T d1tqya1 138 FDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTA 214 (216)
T ss_dssp HHHHSTTHHHHHHHHHHTCCSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC
T ss_pred ccccCchHHHHHHHHhcCccccceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHCCCCCc
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999984
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.72 E-value=1.1e-17 Score=154.22 Aligned_cols=257 Identities=16% Similarity=0.126 Sum_probs=156.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+++|+++++|+ .++++++++ ...+..+.+|+..||
T Consensus 92 ~~~la~~Aa~~aL~~ag~~~~dId-----~lI~~t~t~---------------------------~~~P~~a~~v~~~LG 139 (372)
T d1teda_ 92 AVPLAVDVSKRALAGLPYRAAEIG-----LLVLATSTG---------------------------FIAPGVDVAIVKELG 139 (372)
T ss_dssp HHHHHHHHHHHHHTTCCCCGGGEE-----EEEEEESSC---------------------------CCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEeccCC---------------------------CCCchHHHHHHhhhc
Confidence 346999999999999999988876 666666431 112456789999999
Q ss_pred CCCCc--eecc-CCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCC
Q 018323 94 FQGPN--HAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 170 (358)
Q Consensus 94 l~gp~--~~v~-~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 170 (358)
++... +.+. .||++++.||..|..+|++|.++.+||+++|.++..... .+ -++....
T Consensus 140 l~~~~~~~~~~~~gC~g~~~aL~~A~~~l~sg~~~~~LVV~~E~~s~~~~~----------------~d----~~~~~~~ 199 (372)
T d1teda_ 140 LSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNAVF----------------AD----DINDVVI 199 (372)
T ss_dssp CCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGGGCCC----------------CS----SHHHHHH
T ss_pred cCCceeEeeccccCccHHHHHHHHHHHHHhcCCCccceeeeehhhcccccC----------------CC----cchhhhh
Confidence 98643 3344 589999999999999999999999999999964221100 00 0111122
Q ss_pred ceeeecceEEEEeccHHHHHhcCCeeeEEEEeeeeec-C-CCCC-----C------CCCC-----ChHHHHHHHHHHHHH
Q 018323 171 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSG-D-AHHI-----T------QPHI-----DGKGAILAMTRALKQ 232 (358)
Q Consensus 171 g~~~geGaaa~vL~~~~~A~~~g~~~~a~i~g~~~~~-~-~~~~-----~------~~~~-----~~~~~~~~~~~al~~ 232 (358)
.+++||||+|+||++.+...... .....+.+..... . .... . .... ......+.++++|++
T Consensus 200 ~~lfGDGAaA~ll~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~ 278 (372)
T d1teda_ 200 HSLFGDGCAALVIGASQVQEKLE-PGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWD 278 (372)
T ss_dssp HHHBCEEEEEEEEEEECTTSCCC-TTCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcccceeEEeccCCcccccC-CceeEEecccccccCCCccccccCCCCCcceeechHHHHHHHHHHHHHHHHHHHHh
Confidence 35689999999998654322111 1112223222111 0 0000 0 0000 124456788999999
Q ss_pred cCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCccee-cccCCcCCcccchhHHHHHHHHHHHHhCCCCCCC
Q 018323 233 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTL 311 (358)
Q Consensus 233 agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~-~~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~ 311 (358)
+|++++|||++.+|-.+... ...+.+.++... ..++.+ ..-..+||+.+||=.+.+- ..++++.+
T Consensus 279 ~gl~~~did~~i~Hq~~~~i-----~~~i~~~Lgl~~--ek~~~s~~~l~~~GN~~sasip~~L~---~~l~~g~~---- 344 (372)
T d1teda_ 279 NGLQISDIDLWAIHPGGPKI-----IEQSVRSLGISA--ELAAQSWDVLARFGNMLSVSLIFVLE---TMVQQAES---- 344 (372)
T ss_dssp TTCCGGGCSCEEECCSCHHH-----HHHHHHHHTCCG--GGGHHHHHHHHHHCBCTHHHHHHHHH---HHHHSCSS----
T ss_pred cCCCHHHhhhhhccCccHHH-----HHHHHHHcCCCH--HHhhhhHHHHhccCCcHHHHHHHHHH---HHHHhCCC----
Confidence 99999999999999554332 233344444321 112211 1123468877655333322 23343321
Q ss_pred CCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 312 NLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
....+.++..+||-|=+...+||+..
T Consensus 345 --------------------~~g~d~vll~~fG~G~s~~~~ll~~~ 370 (372)
T d1teda_ 345 --------------------AKAISTGVAFAFGPGVTVEGMLFDII 370 (372)
T ss_dssp --------------------SSSSEEEEEEEEETTTEEEEEEEEEC
T ss_pred --------------------CCCCCEEEEEEEcHHHhHHHHhheee
Confidence 12236777789998877888888865
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=99.53 E-value=5.3e-15 Score=120.67 Aligned_cols=120 Identities=14% Similarity=0.229 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+++|+++++++ .|++++.++ ....+..+..|+..|
T Consensus 48 ~~~~ma~~Aa~~aL~~agi~~~dId-----lli~~s~t~--------------------------~~~~p~~a~~v~~~L 96 (172)
T d1ub7a1 48 YTSDLAFKAVEDLLRRHPGALEGVD-----AVIVATNTP--------------------------DALFPDTAALVQARF 96 (172)
T ss_dssp CHHHHHHHHHHHHHHHSTTTTTTEE-----EEEEECSSC--------------------------SEEESCHHHHHHHHT
T ss_pred cccHHHHHHHHHHHhhcCcccccce-----EEEEecccc--------------------------cccccchHHHHHHHh
Confidence 3578999999999999999998886 677766542 223356678899999
Q ss_pred CCCCCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCce
Q 018323 93 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 172 (358)
Q Consensus 93 gl~gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g~ 172 (358)
|.+.+++.|+.+|++++.+|..|..++++|.++.+||+++|.++.... |+.+...+
T Consensus 97 g~~~~~~di~~~C~g~~~al~~a~~~~~~~~~~~~Lvv~~e~~S~~~~------------------------~~d~~~~~ 152 (172)
T d1ub7a1 97 GLKAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALSKIID------------------------WNDRATAV 152 (172)
T ss_dssp TCCCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGTSC------------------------TTCHHHHT
T ss_pred ccCccceeehhccccHHHHHHHHhhhhhcCCcceeEEecccccccccC------------------------CCCcCeEE
Confidence 988899999999999999999999999999999999999997421110 22223456
Q ss_pred eeecceEEEEeccHH
Q 018323 173 VIGEGSGVLVLEELE 187 (358)
Q Consensus 173 ~~geGaaa~vL~~~~ 187 (358)
++||||+|+||++.+
T Consensus 153 lfGDgAaA~ll~~~~ 167 (172)
T d1ub7a1 153 LFGDGGGAAVVGKVR 167 (172)
T ss_dssp TBCCEEEEEEEECCC
T ss_pred EecceeEEEEEEEcC
Confidence 789999999998754
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=99.53 E-value=3.3e-15 Score=122.16 Aligned_cols=120 Identities=18% Similarity=0.212 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 13 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 13 ~~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
....|+.+|+++||+++|++++++| .+++++.++. ...+..+..|...|
T Consensus 50 ~~~~la~~Aa~~al~~a~~~~~~Id-----~li~~s~~~~--------------------------~~~P~~a~~v~~~L 98 (174)
T d1hnja1 50 TVSTMGFEAATRAIEMAGIEKDQIG-----LIVVATTSAT--------------------------HAFPSAACQIQSML 98 (174)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCS--------------------------CSSSCHHHHHHHHH
T ss_pred cchHHHHHHHHHhhhhccccccccc-----EEEEecCCcc--------------------------ccccchhhhhhhcc
Confidence 3568999999999999999999988 7888876532 22356788999999
Q ss_pred CCCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCc
Q 018323 93 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 171 (358)
Q Consensus 93 gl~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g 171 (358)
|++. +++.++.+|++++.||..|..+|++|.++.+||+++|..+... . ++.....
T Consensus 99 gl~~~~~~di~~~C~g~~~al~~A~~~i~sg~~~~~Lvv~~e~~S~~~-----------~-------------~~d~~~~ 154 (174)
T d1hnja1 99 GIKGCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLARTC-----------D-------------PTDRGTI 154 (174)
T ss_dssp TCCSSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHHHHS-----------C-------------TTCHHHH
T ss_pred CCCchhhhhhhhhhccHHHHHHHHHHHHhcCCcceeEEEeeehhhccc-----------C-------------CCCCCeE
Confidence 9986 8999999999999999999999999999999999999742111 0 1112234
Q ss_pred eeeecceEEEEeccHH
Q 018323 172 FVIGEGSGVLVLEELE 187 (358)
Q Consensus 172 ~~~geGaaa~vL~~~~ 187 (358)
+++||||+|+||++.+
T Consensus 155 ~lfGDgA~A~vl~~~~ 170 (174)
T d1hnja1 155 IIFGDGAGAAVLAASE 170 (174)
T ss_dssp TTBCCEEEEEEEEEES
T ss_pred EEeceeeEEEEEEeCC
Confidence 5789999999998754
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=99.51 E-value=1.7e-14 Score=118.59 Aligned_cols=119 Identities=20% Similarity=0.239 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+++|+++++++ .+++++.++. ...+..+..|+..++
T Consensus 58 ~~~ma~~Aa~~aL~~a~~~~~dId-----~li~~s~~~~--------------------------~~~p~~a~~v~~~l~ 106 (181)
T d1mzja1 58 IQVMGVAASRRALEHAGVDPAEID-----LVVVSTMTNF--------------------------VHTPPLSVAIAHELG 106 (181)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCC--------------------------CCSSCHHHHHHHHHT
T ss_pred HHHHhHHHHHhhhhhccCChhHCe-----EEEEeccCCc--------------------------cccccHHHHHHHhhc
Confidence 568999999999999999999987 7888776522 222455778999999
Q ss_pred CCC-CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCce
Q 018323 94 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 172 (358)
Q Consensus 94 l~g-p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g~ 172 (358)
.+. .++.++.+|++++.||..|..+|++|.++.+||+++|.++. . + .++.....+
T Consensus 107 ~~~~~~~Dv~~~C~g~~~aL~~A~~~i~~~~~~~~LvV~~e~~s~-~----------~-------------~~~d~~~~~ 162 (181)
T d1mzja1 107 ADNAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERMTD-V----------I-------------DLADRSLSF 162 (181)
T ss_dssp CTTCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEGGG-G----------S-------------CSSCTTTTT
T ss_pred CCCccceeHHhhhccHHHHHHHHhCHhhcCCCceeEEeeeccccc-c----------C-------------CCCCcceEE
Confidence 865 88999999999999999999999999999999999997421 1 0 122334567
Q ss_pred eeecceEEEEeccHH
Q 018323 173 VIGEGSGVLVLEELE 187 (358)
Q Consensus 173 ~~geGaaa~vL~~~~ 187 (358)
++||||+|+||++.+
T Consensus 163 lfGDGAaA~ll~~~~ 177 (181)
T d1mzja1 163 LFGDGAGAAVVGPSD 177 (181)
T ss_dssp TBCEEEEEEEEEEES
T ss_pred EeeeeeEEEEEEeCC
Confidence 899999999998643
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.49 E-value=2.2e-14 Score=107.98 Aligned_cols=120 Identities=23% Similarity=0.353 Sum_probs=96.0
Q ss_pred cCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCC
Q 018323 192 RGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS 271 (358)
Q Consensus 192 ~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~ 271 (358)
.|.+|+++|.+++... ..|.....+...+++++|+++|++.+|||+||+| |+++...+...+..+
T Consensus 1 Lgl~plAri~~~a~~g-----~~P~~m~~gPv~Ai~klL~r~gl~~~Did~~Ein----------EAFA~q~l~~~~~l~ 65 (124)
T d1afwa2 1 LNLPVLGRYIDFQTVG-----VPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEIN----------EAFAAQALYCIHKLG 65 (124)
T ss_dssp TTCCCCEEEEEEEEEE-----CCGGGGGGHHHHHHHHHHHHHTCCGGGCSEEEEC----------CSBHHHHHHHHHHHT
T ss_pred CCCcEEEEEEEEEEEe-----cCHHHhhhChHHHHHHHHHHcCCCcccCcEEEec----------cchhHHHHHHHHHcC
Confidence 3678999999999876 3466667788999999999999999999999999 998888886654433
Q ss_pred CCc-ceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccc
Q 018323 272 GSL-AFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGT 348 (358)
Q Consensus 272 ~~~-~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~ 348 (358)
-+. .+|...+ .+|||.||||...++.++.+|++ .++++++...-||.
T Consensus 66 id~~kvN~~GGaiAlGHP~GaSGarlv~~l~~~L~~------------------------------~~~glas~C~ggG~ 115 (124)
T d1afwa2 66 IDLNKVNPRGGAIALGHPLGCTGARQVATILRELKK------------------------------DQIGVVSMCIGTGM 115 (124)
T ss_dssp CCGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCT------------------------------TCEEEEEEEETTTE
T ss_pred CChhhccccCccceecCCcCCchHHHHHHHHHHhcc------------------------------CCEEEEEEcccCCc
Confidence 222 3455555 78999999999999999988743 15677888888888
Q ss_pred eeeeEeee
Q 018323 349 NASLLFTK 356 (358)
Q Consensus 349 ~~~~il~~ 356 (358)
..++|++|
T Consensus 116 G~a~~ier 123 (124)
T d1afwa2 116 GAAAIFIK 123 (124)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 88888886
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=99.47 E-value=3.9e-14 Score=106.65 Aligned_cols=120 Identities=24% Similarity=0.311 Sum_probs=95.2
Q ss_pred eeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhccc--CCC
Q 018323 195 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHA--TSG 272 (358)
Q Consensus 195 ~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~--~~~ 272 (358)
+|+++|.+++... ..|.....+...+++++|+++|++++|||+||.| |++|.+.+...+. .+.
T Consensus 1 KPlA~i~~~~~~g-----~~P~~~~~~P~~A~~~~L~r~gl~~~Did~~Ein----------EAFAaq~l~~~~~~~l~~ 65 (125)
T d1ulqa2 1 RPLARVRAIAVAG-----VPPRIMGIGPVPATRKALERAGLSFSDLGLIELN----------EAFAAQALAVLREWSLSM 65 (125)
T ss_dssp CCSEEEEEEEEEE-----CCGGGGGGTHHHHHHHHHHHTTCCGGGCSEEEEC----------CSBHHHHHHHHHHHTCCT
T ss_pred CCeEEEEEEEEEe-----cCHHHHhhccHHHHHhHhhccCcCccccchheec----------cccchhHHHHHHHhhccC
Confidence 4789999998876 3455556677899999999999999999999999 9888766644332 111
Q ss_pred C-cceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccce
Q 018323 273 S-LAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTN 349 (358)
Q Consensus 273 ~-~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~ 349 (358)
+ -.+|...+ .+|||.||||...+..++.+|+.+ +.++.+++...-||..
T Consensus 66 d~~kvN~~GGaIAlGHP~GASGari~~tl~~~L~~~----------------------------~~~~G~as~C~gGG~g 117 (125)
T d1ulqa2 66 EDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRR----------------------------KVQFGLATMCIGVGQG 117 (125)
T ss_dssp TCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT----------------------------TCSEEEEEEEETTTEE
T ss_pred chhhcCCCCCcccccCCccccchhHHHHHHHHHHhc----------------------------CCCEEEEEecccccce
Confidence 1 13555566 789999999999999999999762 2478888889999999
Q ss_pred eeeEeeec
Q 018323 350 ASLLFTKC 357 (358)
Q Consensus 350 ~~~il~~~ 357 (358)
.++++|+.
T Consensus 118 ~A~~iE~i 125 (125)
T d1ulqa2 118 IAVVVEGM 125 (125)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEeC
Confidence 99999973
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=99.45 E-value=6e-14 Score=105.42 Aligned_cols=120 Identities=23% Similarity=0.313 Sum_probs=97.0
Q ss_pred eeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCc
Q 018323 195 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSL 274 (358)
Q Consensus 195 ~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~ 274 (358)
+|+++|.++.... ..|...+.+...+++++|+++|++.+|||+||+| |+++...+...+..+-+.
T Consensus 2 ~Plari~~~a~~g-----~dP~~mg~~Pv~A~~~lL~r~gl~~~Did~~Ein----------EAFA~q~la~~~~l~id~ 66 (124)
T d1m3ka2 2 QPLGRIVSWATVG-----VDPKVMGTGPIPASRKALERAGWKIGDLDLVEAN----------EAFAAQACAVNKDLGWDP 66 (124)
T ss_dssp CCSEEEEEEEEEE-----CCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEEC----------CSBHHHHHHHHHHHCCCG
T ss_pred CcEEEEEEEEEEe-----cChHHhccchHHHHHHHHHHcCCChhcccHHHhc----------ccchhheeeehHhhCCCh
Confidence 5789999998876 3565566778899999999999999999999999 988888776554433222
Q ss_pred -ceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceee
Q 018323 275 -AFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNAS 351 (358)
Q Consensus 275 -~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~ 351 (358)
.+|...+ .+|||.||||...+..++..|+++ +.++.+++...-||...+
T Consensus 67 ~kvN~~GGaiAlGHP~GaSGarl~~tl~~~L~~~----------------------------~~~~Glas~C~gGG~g~A 118 (124)
T d1m3ka2 67 SIVNVNGGAIAIGHPIGASGARILNTLLFEMKRR----------------------------GARKGLATLCIGGGMGVA 118 (124)
T ss_dssp GGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHH----------------------------TCSEEEEEEEETTTEEEE
T ss_pred hhcCCCCCccccccCcCccchhHHHHHHHHHHhc----------------------------CCCEEEEEecccccceeE
Confidence 3455555 789999999999999999999762 247889889999999999
Q ss_pred eEeeec
Q 018323 352 LLFTKC 357 (358)
Q Consensus 352 ~il~~~ 357 (358)
++||+.
T Consensus 119 ~liE~v 124 (124)
T d1m3ka2 119 MCIESL 124 (124)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 999873
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=99.43 E-value=1.1e-13 Score=104.72 Aligned_cols=122 Identities=24% Similarity=0.306 Sum_probs=97.0
Q ss_pred CCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCC-
Q 018323 193 GAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS- 271 (358)
Q Consensus 193 g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~- 271 (358)
|.+|+++|++++... ..|.....+...+++++|+++|++.+|||+||+| |+++...+...+...
T Consensus 1 Gl~pla~i~~~~~~g-----~dP~~mg~~p~~A~~klL~ragl~~~did~~Ein----------EAFA~q~l~~~~~~~~ 65 (128)
T d1wdkc2 1 GLEPLAVIRSMAVAG-----VDPAIMGYGPVPATQKALKRAGLNMADIDFIELN----------EAFAAQALPVLKDLKV 65 (128)
T ss_dssp TCCCSEEEEEEEEEE-----CCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEEC----------CSBHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEEEEEe-----cCHHHhccCcHHHHHHHhhhcCccccccceEEee----------cccchhhhhhhhhccc
Confidence 467899999999876 3455566778899999999999999999999999 888877664432211
Q ss_pred CC---cceecccC--CcCCcccchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccc
Q 018323 272 GS---LAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFG 346 (358)
Q Consensus 272 ~~---~~v~~~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~g 346 (358)
.. -.+|...+ .+|||.||||...+..++.+|+++ +.++.+++...-|
T Consensus 66 ~~~~~ekvN~~GGaiAlGHP~GASGaRlv~~l~~~L~~~----------------------------~~~~Glas~C~gG 117 (128)
T d1wdkc2 66 LDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQN----------------------------GGTFGLSTMCIGL 117 (128)
T ss_dssp GGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT----------------------------TCSEEEEEEEETT
T ss_pred ccCCcceecCCCCcccccccccccchhHHHHHHHHHHhc----------------------------CCCEEEEEecccc
Confidence 11 13555666 789999999999999999999762 2478888899999
Q ss_pred cceeeeEeeec
Q 018323 347 GTNASLLFTKC 357 (358)
Q Consensus 347 G~~~~~il~~~ 357 (358)
|...+++||+.
T Consensus 118 G~g~A~~iErv 128 (128)
T d1wdkc2 118 GQGIATVFERV 128 (128)
T ss_dssp TEEEEEEEECC
T ss_pred cceeEEEEEeC
Confidence 99999999974
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=99.42 E-value=6.4e-13 Score=116.17 Aligned_cols=94 Identities=17% Similarity=0.117 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+..+++++|+++|++++++| .|++|+..... .-...++..++...|
T Consensus 24 ~~dL~~~a~~~al~~~~i~~~~Id-----~vi~G~v~~~g-------------------------~~~~n~aR~~al~aG 73 (273)
T d1ulqa1 24 PDDLLAHALSVLVDRSGVPKEEVE-----DVYAGCANQAG-------------------------EDNRNVARMALLLAG 73 (273)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCSS-------------------------TTTTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccccc-------------------------cccccHHHHHHHHcC
Confidence 356889999999999999999998 99999864211 011235666777778
Q ss_pred CCC--CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcC
Q 018323 94 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID 137 (358)
Q Consensus 94 l~g--p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~ 137 (358)
+.. |.++|+..|+||+.||..|++.|++|..|++|++|+|+++.
T Consensus 74 lp~~vp~~tVn~~CaSg~~Ai~~a~~~I~~G~~d~~lagG~EsmS~ 119 (273)
T d1ulqa1 74 FPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSR 119 (273)
T ss_dssp CCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSS
T ss_pred CCCccceEEEecccchHHHHHHHHHHHHhcCCCccceeeeccccch
Confidence 853 89999999999999999999999999999999999998664
|
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=99.41 E-value=4.2e-13 Score=116.74 Aligned_cols=93 Identities=18% Similarity=0.180 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+..+.+++|+++|++++++| .|++|+..... -...++.+++...|
T Consensus 27 ~~dL~~~~~~~~l~~~~i~~~~Id-----~vi~G~~~~~~--------------------------~~~n~ar~~al~ag 75 (268)
T d1m3ka1 27 AHELGATVISAVLERAGVAAGEVN-----EVILGQVLPAG--------------------------EGQNPARQAAMKAG 75 (268)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCTT--------------------------SCSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCc-----EEEEeeccccC--------------------------cchHHHhHHHHHhC
Confidence 457899999999999999999998 89999865211 11245667788888
Q ss_pred CCC--CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcC
Q 018323 94 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID 137 (358)
Q Consensus 94 l~g--p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~ 137 (358)
+.. |+++|+..|+||+.||..|++.|++|++|++|++|+|+++.
T Consensus 76 lp~~vpa~tv~~~C~Sg~~Ai~~Aa~~I~~G~~dvvlagG~EsmS~ 121 (268)
T d1m3ka1 76 VPQEATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMSM 121 (268)
T ss_dssp CCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTT
T ss_pred CcccccceeecccCcccchHHHHHHHHHhCCCceEEeecccccccc
Confidence 863 89999999999999999999999999999999999998764
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.39 E-value=2.3e-13 Score=113.50 Aligned_cols=117 Identities=19% Similarity=0.206 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+..|+++||+++|+++++++ .+++.++++ +. .+..+..|...+|
T Consensus 75 a~~la~~Aa~~aL~~ag~~~~dId-----~lI~~s~t~----------------------~~-----~P~~aa~v~~~lg 122 (200)
T d1u0ma1 75 AKSRVPAVIQRALDDAELLATDID-----VIIYVSCTG----------------------FM-----MPSLTAWLINEMG 122 (200)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCS-----EEEEECSSS----------------------CC-----SSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCChhhhh-----eEEEeccCC----------------------CC-----cchhHHHHHHHHh
Confidence 356999999999999999999998 777776542 11 2346778999999
Q ss_pred CCC--Cceec-cCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCC-
Q 018323 94 FQG--PNHAA-VTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR- 169 (358)
Q Consensus 94 l~g--p~~~v-~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~- 169 (358)
+++ +.+.+ ..+|++++.+|..|..+|++|..+.|||+++|.++... +|-+...
T Consensus 123 ~~~~~~~~~i~~~gC~g~~~al~~A~~~l~~~~~~~vLvv~~e~~S~~~-----------------------~~~d~~~~ 179 (200)
T d1u0ma1 123 FDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCSLCY-----------------------QPTDLGVG 179 (200)
T ss_dssp CCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEGGGGC-----------------------CTTCCSHH
T ss_pred cCCCeeEeccccchhhHHHHHHHHHHHHHHhCCCCEEEEEEEecccccc-----------------------CCCCCChh
Confidence 986 44555 47999999999999999999999999999999743211 1111111
Q ss_pred ---CceeeecceEEEEecc
Q 018323 170 ---DGFVIGEGSGVLVLEE 185 (358)
Q Consensus 170 ---~g~~~geGaaa~vL~~ 185 (358)
...++||||+|+||.+
T Consensus 180 ~~~~~~lFgDGAaA~ll~~ 198 (200)
T d1u0ma1 180 SLLCNGLFGDGIAAAVVRG 198 (200)
T ss_dssp HHHHHHHBCEEEEEEEEET
T ss_pred hhhcccccccccEEEEEec
Confidence 2346899999999975
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=99.32 E-value=1.2e-12 Score=113.46 Aligned_cols=94 Identities=18% Similarity=0.156 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHHH-CCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHc
Q 018323 14 FIAYALCAADEALHD-AKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 92 (358)
Q Consensus 14 ~~~l~~~aa~~Al~d-AG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 92 (358)
...|+..+++++|++ +|+++++++ .|++|+..... .....++..++...
T Consensus 30 ~~dL~~~~i~~~l~r~agi~~~~Id-----~vi~G~v~~~~-------------------------~~g~n~aR~~al~a 79 (262)
T d1wdkc1 30 AEDMSAHLISKVLERNSKVDPGEVE-----DVIWGCVNQTL-------------------------EQGWNIARMASLMT 79 (262)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGEE-----EEEEECSSBSB-------------------------TTTTTHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHhcCCCCHHHee-----EEEEEeecccc-------------------------cccccchhhhHhhh
Confidence 368899999999995 999999888 89999864211 00123455666666
Q ss_pred CCCC--CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcC
Q 018323 93 GFQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID 137 (358)
Q Consensus 93 gl~g--p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~ 137 (358)
|+.. |.++|+..|+||+.||..|++.|++|++|++|++|+|+++.
T Consensus 80 g~p~~vp~~tV~~~C~Sgl~Ai~~aa~~I~sG~~dvvlAgGvEsmS~ 126 (262)
T d1wdkc1 80 QIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGH 126 (262)
T ss_dssp SSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTT
T ss_pred hcccccchhhccccccHHHHHHHHHHHHHHhhcCCceeeeccccccc
Confidence 7653 89999999999999999999999999999999999998655
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=99.30 E-value=4.3e-12 Score=108.22 Aligned_cols=123 Identities=12% Similarity=0.073 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+.+|+++||+++|+++++++ .|+++++++.. .++ ....+...++
T Consensus 102 ~~~la~~Aa~~aL~~a~~~~~dId-----~lI~~t~t~~~--------------------------~p~-~~a~~~~~l~ 149 (235)
T d1bi5a1 102 VPRLGKEAAVKAIKEWGQPKSKIT-----HLIVCTTSGVD--------------------------MPG-ADYQLTKLLG 149 (235)
T ss_dssp HHHHHHHHHHHHHHHHCSCGGGCC-----EEEEEESSCCC--------------------------SSC-HHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCChhHCc-----EEEEecccCCc--------------------------cCc-cHHHHHHHHh
Confidence 346999999999999999999998 88888876321 112 2446667777
Q ss_pred CCCCc--e-eccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCC
Q 018323 94 FQGPN--H-AAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 170 (358)
Q Consensus 94 l~gp~--~-~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 170 (358)
+.... + .+..+|++++.+|..|..+|++|..+.|||+++|.++.... +.+.. .++.--.
T Consensus 150 ~~~~~~~~~~~~~~C~g~~~al~~A~~~i~~~~~~~vLvV~~E~~S~~~~-----------------~~d~~-~~~~~v~ 211 (235)
T d1bi5a1 150 LRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFR-----------------GPSDT-HLDSLVG 211 (235)
T ss_dssp CCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECGGGTCC-----------------CCCTT-CHHHHHH
T ss_pred cCCCceEEeeecCccchHHHHHHHHHHHHHcCCCCeEEEEEeeecceecC-----------------CCCCC-chhhhcc
Confidence 76532 3 35779999999999999999999999999999997422110 00000 0000001
Q ss_pred ceeeecceEEEEeccH
Q 018323 171 GFVIGEGSGVLVLEEL 186 (358)
Q Consensus 171 g~~~geGaaa~vL~~~ 186 (358)
.+++||||+|+||+..
T Consensus 212 ~~lFGDGA~A~vl~~~ 227 (235)
T d1bi5a1 212 QALFGDGAAALIVGSD 227 (235)
T ss_dssp HHHBCCEEEEEEEESS
T ss_pred eeeeccceEEEEEecC
Confidence 3468999999999864
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.27 E-value=1.7e-11 Score=106.40 Aligned_cols=93 Identities=18% Similarity=0.144 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHH----CCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHH
Q 018323 14 FIAYALCAADEALHD----AKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVS 89 (358)
Q Consensus 14 ~~~l~~~aa~~Al~d----AG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia 89 (358)
...|+..+.+++|++ +|++++++| .|++|+.... + ....++..++
T Consensus 35 ~~~L~~~~i~~~l~r~~~~~~idp~~Id-----~vi~G~v~~~-------------------------g-~~~~~aR~~a 83 (269)
T d1afwa1 35 TDYLLYNFLNEFIGRFPEPLRADLNLIE-----EVACGNVLNV-------------------------G-AGATEHRAAC 83 (269)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHTCGGGCC-----CEEEECSSSB-------------------------G-GGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCccccCChhhcC-----EEEecccccc-------------------------c-cccccchhhh
Confidence 356788889999975 579999998 8999986421 1 1124566677
Q ss_pred HHcCCC--CCceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcC
Q 018323 90 MKYGFQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID 137 (358)
Q Consensus 90 ~~lgl~--gp~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~ 137 (358)
..-|+. -|.++|+..|+||+.||..|++.|++|+.|++|++|+|.++.
T Consensus 84 l~aglp~~vpa~tVnr~CaSg~~Ai~~Aa~~I~~G~~divlagG~EsmS~ 133 (269)
T d1afwa1 84 LASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTN 133 (269)
T ss_dssp HHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHH
T ss_pred hhccccccccchhccccchHHHHHHHHHHHHHhhccccceeeeecccccc
Confidence 777875 399999999999999999999999999999999999998654
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=98.98 E-value=1.2e-10 Score=93.82 Aligned_cols=113 Identities=14% Similarity=0.144 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEecCCCChHHHHHHHHHHHHhcccCCCCcchhhhhhhHHHHHHHHHcC
Q 018323 14 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 93 (358)
Q Consensus 14 ~~~l~~~aa~~Al~dAG~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 93 (358)
...|+..|++++|++.+ +++++ -+++++.++ ....+..+..+...+|
T Consensus 50 ~~~ma~~Aa~~al~~~~--~~~id-----~li~~t~~~--------------------------~~~~p~~a~~v~~~lg 96 (166)
T d1xpma1 50 IVSMGANAAKDIITDED--KKKIG-----MVIVATESA--------------------------VDAAKAAAVQIHNLLG 96 (166)
T ss_dssp HHHHHHHHHHTTCCHHH--HHHEE-----EEEEECSSC--------------------------SBSSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHhhhcccc--CCCCC-----eEEEecccc--------------------------ccccchhHHHHHHhhc
Confidence 45699999999987764 34443 455555432 1223566888999999
Q ss_pred CCC--CceeccCCchhHHHHHHHHHHHHHcCCCCEEEEeecCCCcChHHHHHHhhhcccccccCCCCCCCCCCCcCCCCc
Q 018323 94 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 171 (358)
Q Consensus 94 l~g--p~~~v~~~cas~~~Al~~A~~~I~~G~~d~vlv~g~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~g 171 (358)
++. .++.+..+|++++.||..|..+|++|..+.+||++.|..... ++ ...-
T Consensus 97 ~~~~~~~~dv~~~C~g~~~al~~A~~~i~~~~~~~alvV~sd~~~~~--------------------------~~-~~~~ 149 (166)
T d1xpma1 97 IQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDTARYG--------------------------LN-SGGE 149 (166)
T ss_dssp CCSSCEEEEEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEEECCC--------------------------TT-CSSG
T ss_pred cccceEEeeecccHHHHHHHHHHHhhHHhcCCCCeEEEEEEceEecc--------------------------CC-CCCC
Confidence 975 678999999999999999999999999999999999863111 01 1122
Q ss_pred eeeecceEEEEeccH
Q 018323 172 FVIGEGSGVLVLEEL 186 (358)
Q Consensus 172 ~~~geGaaa~vL~~~ 186 (358)
+.+||||+|+||++.
T Consensus 150 ~~fGDGA~A~ll~~~ 164 (166)
T d1xpma1 150 PTQGAGAVAMVIAHN 164 (166)
T ss_dssp GGCEEEEEEEEEEES
T ss_pred ccCCCeeEEEEEecC
Confidence 568999999999863
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.41 E-value=0.00041 Score=53.31 Aligned_cols=99 Identities=16% Similarity=0.160 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHH
Q 018323 221 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVL 300 (358)
Q Consensus 221 ~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~ 300 (358)
...++++++|+++|++++|||++.+|-.+.. -..++.+-++... .+. +.+.-..+||+.+|+=.+.+.++
T Consensus 49 ~v~~~i~~~L~~~gl~~~dId~~i~Hqa~~~-----i~~~v~~~lgl~~--ek~-~~~~~~~~GNt~sasip~~L~~a-- 118 (148)
T d1u6ea2 49 KMGDVGRRAMDAAGVRPDQIDVFVPHQANSR-----INELLVKNLQLRP--DAV-VANDIEHTGNTSAASIPLAMAEL-- 118 (148)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEECCSCHH-----HHHHHHHHHTCCT--TCE-ECCTHHHHCBCGGGHHHHHHHHH--
T ss_pred HHHHHHHHHHHHcCCCcccccEEEeccccHH-----HHHHHHHhcCCCc--hhh-hhhhHHhhCCCccchHHHHHHHH--
Confidence 3457889999999999999999999943322 3444444454321 112 22234467888888766665544
Q ss_pred HHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 301 AIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 301 ~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
++.+.+ .+....+..+||.|=+-+++||+
T Consensus 119 -~~~g~i-------------------------~~Gd~vll~gfG~G~s~~a~llr 147 (148)
T d1u6ea2 119 -LTTGAA-------------------------KPGDLALLIGYGAGLSYAAQVVR 147 (148)
T ss_dssp -HHHTSS-------------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred -HHcCCC-------------------------CCCCEEEEEEEchhhhheEEEEe
Confidence 444432 22466777799988777777775
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=97.15 E-value=0.00072 Score=51.99 Aligned_cols=97 Identities=21% Similarity=0.156 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHH
Q 018323 222 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLA 301 (358)
Q Consensus 222 ~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~ 301 (358)
...+++++|+++|++++|||++.+|-.+ ..+ ...+.+.++-.. .+.+ . .-..+||+.+|+=.+.+. ..
T Consensus 49 vp~~i~~~L~~~g~~~~dId~~i~Hqa~----~~~-~~~i~~~lgi~~--~k~~-~-~~~~~Gn~~sasip~~L~---~~ 116 (149)
T d1ub7a2 49 MNTATLEAIEKAGLTPEDIRLFVPHQAN----LRI-IDAARERLGLPW--ERVA-V-NVDRYGNTSTASIPLALK---EA 116 (149)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECCSC----HHH-HHHHHHTTTCCG--GGBC-C-CHHHHCBCGGGHHHHHHH---HH
T ss_pred HHHHHHHHHHhhccccccccEEEeeccc----hHH-HHHHHhhccchh--hHHH-H-HHHHhcCCcchhHHHHHH---HH
Confidence 3478899999999999999999999332 222 233333333221 1122 1 223578888877554443 34
Q ss_pred HHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 302 IHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 302 l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
++.+.+ .+.+..+..+||.|-+..++||+
T Consensus 117 ~~~~~~-------------------------~~Gd~vll~g~G~G~s~ga~llr 145 (149)
T d1ub7a2 117 VDAGRI-------------------------REGDHVLLVSFGAGLTWAAAVLT 145 (149)
T ss_dssp HHHTSS-------------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred HHcCCC-------------------------CCCCEEEEEEEchHhhhEEEEEE
Confidence 444443 23467788899988887777775
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=97.13 E-value=0.0015 Score=49.65 Aligned_cols=97 Identities=20% Similarity=0.162 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHH
Q 018323 222 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLA 301 (358)
Q Consensus 222 ~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~ 301 (358)
+.++++++|+++|++++|||++..|-.+.. =...+.+.++-.. .+++ ..-..+||+.+|+=.+.+-++
T Consensus 46 ~~~~i~~~L~~~g~~~~dId~~i~Hq~~~~-----~~~~~~~~l~l~~--~k~~--~~~~~~GN~~sasip~~L~~~--- 113 (143)
T d1hnja2 46 LAHIVDETLAANNLDRSQLDWLVPHQANLR-----IISATAKKLGMSM--DNVV--VTLDRHGNTSAASVPCALDEA--- 113 (143)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEECCSCHH-----HHHHHHHHTTCCG--GGBC--CCHHHHCBCGGGHHHHHHHHH---
T ss_pred hhHHHHHHHHHhhhcccccceEEeccCchH-----HHHHHHHhCccch--hhhh--hhhhhhcccccchHHHHHHHH---
Confidence 456889999999999999999999943322 2333344444322 1222 223467998888755554443
Q ss_pred HHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 302 IHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 302 l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
++.+.+ .+....+..+||.|=+.++++|+
T Consensus 114 ~~~~~~-------------------------~~Gd~vll~g~G~G~s~g~~llr 142 (143)
T d1hnja2 114 VRDGRI-------------------------KPGQLVLLEAFGGGFTWGSALVR 142 (143)
T ss_dssp HHTTCS-------------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred HHhCCC-------------------------CCCCEEEEEEEehhhhhEEEEEE
Confidence 344332 23467777899988777777775
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=96.53 E-value=0.0074 Score=46.23 Aligned_cols=100 Identities=17% Similarity=0.104 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHH
Q 018323 221 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVL 300 (358)
Q Consensus 221 ~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~ 300 (358)
.+.++++++|+++|++++|||++.+|-.+.. -...+.+.++-.. ... +...-..+||+.+||=.+.|. .
T Consensus 49 ~vp~~i~~~L~~~gl~~~dId~~i~Hq~~~~-----~~~~v~~~lgi~~--ek~-~~~~~~~~GNt~Sasip~~L~---~ 117 (153)
T d1mzja2 49 DVVPAAREALEVAGLTVGDLVAFVPHQANLR-----IIDVLVDRLGVPE--HVV-VSRDAEDTGNTSSASVALALD---R 117 (153)
T ss_dssp HHHHHHHHHHHTTTCCGGGCSEEEECCSCHH-----HHHHHHHHHTCCT--TSE-ECCTHHHHCBCTTHHHHHHHH---H
T ss_pred HHHHHHHHHHHHhCCCcccCCEEEEcCCcHH-----HHHHHHHHhCCCc--hhc-chhhhhhcCCcccchHHHHHH---H
Confidence 4556889999999999999999999943322 3344444444321 111 222224578877765333322 3
Q ss_pred HHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeee
Q 018323 301 AIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 356 (358)
Q Consensus 301 ~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~ 356 (358)
.++++.+ .+....+..+||.|=+.+.++|+-
T Consensus 118 ~~~~~~~-------------------------~~Gd~ill~~fG~G~s~~~~~l~~ 148 (153)
T d1mzja2 118 LVRSGAV-------------------------PGGGPALMIGFGAGLSYAGQALLL 148 (153)
T ss_dssp HHHHTSS-------------------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHcCCC-------------------------CCCCEEEEEEEchhhhhhEEEEEe
Confidence 3444432 223566777888776656666654
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=95.79 E-value=0.0088 Score=45.52 Aligned_cols=101 Identities=18% Similarity=0.136 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCccee-cccCCcCCcccchhHHHHHHH
Q 018323 220 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFA 298 (358)
Q Consensus 220 ~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~-~~k~~~Gh~~~asG~~~l~~~ 298 (358)
.....+++++|+++|++++|||++.+|-.+.. -...+.+.++-.. ..++.+ .+-..+||+.+|+=.+.+-
T Consensus 43 ~~~~~~i~~~l~~~g~~~~did~~~~Hq~~~~-----i~~~i~~~Lgl~~--~k~~~s~~~l~~~GN~~sasi~~~L~-- 113 (148)
T d1u0ma2 43 EPLAPALKELAGEHGWDASDLDFYIVHAGGPR-----ILDDLSTFLEVDP--HAFRFSRATLTEYGNIASAVVLDALR-- 113 (148)
T ss_dssp HHHHHHHHHHHHTTSCCSSCCSCCEEECSHHH-----HHHHHHHHSCSCG--GGGHHHHHHHHHTCBCTTHHHHHHHH--
T ss_pred HHHHHHHHHHHHHhCCCHHHCCEEEECCCCHH-----HHHHHHHHhCCCh--hhhhHHHHHHHhcCCCCcchHHHHHH--
Confidence 45678899999999999999999999933221 2334444443221 112111 1223568888877333332
Q ss_pred HHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEee
Q 018323 299 VLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 355 (358)
Q Consensus 299 ~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~ 355 (358)
..++++.+.| ....+..+||.|=+..+++++
T Consensus 114 -~~~~~~~~~~-------------------------Gd~ill~gfG~G~s~~~~llr 144 (148)
T d1u0ma2 114 -RLFDEGGVEE-------------------------GARGLLAGFGPGITAEMSLGC 144 (148)
T ss_dssp -HHHHSCCCCS-------------------------SCCCEEEEEETTTEEEEEEEE
T ss_pred -HHHHcCCCCC-------------------------CCEEEEEEEchHhEeeEEEEE
Confidence 3334444321 244567788866665555553
|
| >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=94.73 E-value=0.12 Score=39.10 Aligned_cols=110 Identities=11% Similarity=0.044 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCccee-cccCCcCCcccchhHHHHHHH
Q 018323 220 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFA 298 (358)
Q Consensus 220 ~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~-~~k~~~Gh~~~asG~~~l~~~ 298 (358)
......+.+.|+++|++.+|||++.+|--|.. =..++.+.++-.. .+++.+ .+-..+|++-+||=..-+-+.
T Consensus 42 ~~i~~~~~~~l~~~gl~~~di~~~v~Hqgg~~-----Ild~v~~~L~L~~--~~~~~s~~vl~~yGN~SSasi~~vL~~~ 114 (154)
T d1bi5a2 42 KNITKALVEAFEPLGISDYNSIFWIAHPGGPA-----ILDQVEQKLALKP--EKMNATREVLSEYGNMSSACVLFILDEM 114 (154)
T ss_dssp HHHHHHHHHHHGGGTCCCTTSSEEEECCSSHH-----HHHHHHHHHTCCG--GGGHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCccccceEeeccccHH-----HHHHHHHHhCCCH--HHHHHhHHHHHhcCCCCcccHHHHHHHH
Confidence 45567888999999999999999999943322 3444455554322 122221 122356888777654444433
Q ss_pred HHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 299 VLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 299 ~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
...-+. .+. ..........+..+||-|=+...++|++.
T Consensus 115 ~~~~~~---~~~------------------~~~g~~~~~~~~~aFG~Glt~~~~llr~~ 152 (154)
T d1bi5a2 115 RKKSTQ---NGL------------------KTTGEGLEWGVLFGFGPGLTIETVVLRSV 152 (154)
T ss_dssp HHHHHH---TTC------------------SBTTTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred HHhhhc---cCC------------------cccCCCcCEEEEEEEchHHhHHHHHHhcC
Confidence 332211 111 00112346778889999999999999985
|
| >d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Pyrone synthase (PyS, chalcone synthase 2) species: Gerbera hybrid cultivar [TaxId: 18101]
Probab=94.55 E-value=0.13 Score=39.24 Aligned_cols=110 Identities=15% Similarity=0.104 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCccee-cccCCcCCcccchhHHHHHHH
Q 018323 220 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFA 298 (358)
Q Consensus 220 ~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~-~~k~~~Gh~~~asG~~~l~~~ 298 (358)
......+++.|+++|++.+|||++.+|--|.. =..++.+-++-.. ..+..+ .+-..+|++-++|=..-+-+.
T Consensus 47 ~~v~~~v~~~l~~~gl~~~di~~~v~Hqgg~~-----Ild~i~~~L~L~~--~~l~~s~~vl~~yGNtSSaSI~~vL~~~ 119 (160)
T d1ee0a2 47 KNIENAAEKALSPLGITDWNSVFWMVHPGGRA-----ILDQVERKLNLKE--DKLRASRHVLSEYGNLISACVLFIIDEV 119 (160)
T ss_dssp HHHHHHHHHHHGGGTCCCGGGSEEEECCSSHH-----HHHHHHHHTTCCT--TTTHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCCccccceEeecCCcHH-----HHHHHHHHcCCCH--HHHHHHHHHHHHhCCCccchHHHHHHHH
Confidence 45567889999999999999999999933322 2344444444322 222221 122356888877654444443
Q ss_pred HHHHHhCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeec
Q 018323 299 VLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 357 (358)
Q Consensus 299 ~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~ 357 (358)
... +...+. ........+.+..+||-|=+...++|++.
T Consensus 120 ~~~---~~~~~~------------------~~~g~~~d~~ll~afG~Glt~~~~llr~~ 157 (160)
T d1ee0a2 120 RKR---SMAEGK------------------STTGEGLDCGVLFGFGPGMTVETVVLRSV 157 (160)
T ss_dssp HHH---HHHTTC------------------SBTBTTBSEEEEEEEETTTEEEEEEEEEC
T ss_pred Hhh---hhhcCC------------------CCcCCCcCEEEEEEEChHHHHHHHHHeec
Confidence 322 211110 01112346788889999999999999985
|
| >d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Dihydropinosylvin synthase species: Scots pine (Pinus sylvestris) [TaxId: 3349]
Probab=93.42 E-value=0.23 Score=37.62 Aligned_cols=110 Identities=12% Similarity=0.062 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCccee-cccCCcCCcccchhHHHHHHH
Q 018323 220 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFA 298 (358)
Q Consensus 220 ~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~-~~k~~~Gh~~~asG~~~l~~~ 298 (358)
......++++|++++++.+|||++..|--|.. =..++.+-++-.. .+++.+ .+-..+|++.+||=..-+-.+
T Consensus 43 ~~i~~~~~~~l~~~~~~~~did~~i~Hqgg~~-----Ild~v~~~L~L~~--~k~~~s~~~l~~~GN~sSasip~~L~~~ 115 (156)
T d1u0ua2 43 ANIENCMVEAFSQFKISDWNKLFWVVHPGGRA-----ILDRVEAKLNLDP--TKLIPTRHVMSEYGNMSSACVHFILDQT 115 (156)
T ss_dssp HHHHHHHHHHHGGGTCCCGGGSEEEECCSCHH-----HHHHHHHHHTCCT--TTTHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCChhhCceEeecCCcHH-----HHHHHHHHhCCCc--ccchhhHHHHhhcCCCCcccHHHHHHHH
Confidence 45667889999999999999999999944333 2334444444322 122221 112356887777644443333
Q ss_pred HHHHH-hCCCCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEeeccccccceeeeEeeecC
Q 018323 299 VLAIH-HGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 358 (358)
Q Consensus 299 ~~~l~-~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~il~~~~ 358 (358)
...-. .+.. .........+..+||-|=+...+||++.+
T Consensus 116 ~~~~~~~~~~----------------------~~~~~~~~~~~~gfG~Glt~~~~llr~~~ 154 (156)
T d1u0ua2 116 RKASLQNGCS----------------------TTGEGLEMGVLFGFGPGLTIETVVLKSVP 154 (156)
T ss_dssp HHHHHHHTCS----------------------BSBTTBSEEEEEEEETTTEEEEEEEEECB
T ss_pred HHhhhhccCC----------------------CcCCCCCEEEEEEECHHHhHHHHHHeeCc
Confidence 32221 1111 11123567888899999999999999864
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=90.11 E-value=0.29 Score=38.58 Aligned_cols=78 Identities=15% Similarity=-0.022 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHH
Q 018323 221 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVL 300 (358)
Q Consensus 221 ~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~ 300 (358)
-..++++++|+++|++|+|||++... +.|...-+.-...+...++.. ..+.. -.+.+..+++++..+-.+..
T Consensus 78 la~~Aa~~aL~~ag~~~~dId~lI~~-s~t~~~~P~~aa~v~~~lg~~---~~~~~----~~i~~~gC~g~~~al~~A~~ 149 (200)
T d1u0ma1 78 RVPAVIQRALDDAELLATDIDVIIYV-SCTGFMMPSLTAWLINEMGFD---STTRQ----IPIAQLGCAAGGAAINRAHD 149 (200)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEEE-CSSSCCSSCHHHHHHHHTTCC---TTCEE----EEECSCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCChhhhheEEEe-ccCCCCcchhHHHHHHHHhcC---CCeeE----eccccchhhHHHHHHHHHHH
Confidence 34578999999999999999998764 444332111111122222211 11111 11234566677777777777
Q ss_pred HHHhCC
Q 018323 301 AIHHGV 306 (358)
Q Consensus 301 ~l~~~~ 306 (358)
.++.+.
T Consensus 150 ~l~~~~ 155 (200)
T d1u0ma1 150 FCTAYP 155 (200)
T ss_dssp HHHHST
T ss_pred HHHhCC
Confidence 777653
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=88.46 E-value=0.39 Score=36.81 Aligned_cols=46 Identities=24% Similarity=0.130 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCC-CCcHHHHHHHHHHhh
Q 018323 220 KGAILAMTRALKQSGLQSHQVDYVNAHATSTP-LGDTVEATAIRTVFS 266 (358)
Q Consensus 220 ~~~~~~~~~al~~agl~~~did~i~~h~~gt~-~~d~~E~~a~~~~~~ 266 (358)
....++.+++|+++|++|+|||++.+. +.|+ ...+.-...+.+.++
T Consensus 51 ~ma~~Aa~~aL~~agi~~~dIdlli~~-s~t~~~~~p~~a~~v~~~Lg 97 (172)
T d1ub7a1 51 DLAFKAVEDLLRRHPGALEGVDAVIVA-TNTPDALFPDTAALVQARFG 97 (172)
T ss_dssp HHHHHHHHHHHHHSTTTTTTEEEEEEE-CSSCSEEESCHHHHHHHHTT
T ss_pred HHHHHHHHHHHhhcCcccccceEEEEe-cccccccccchHHHHHHHhc
Confidence 455678999999999999999998876 3344 223334444444454
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=85.37 E-value=1.2 Score=34.15 Aligned_cols=77 Identities=19% Similarity=0.126 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC-CcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHH
Q 018323 220 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPL-GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 298 (358)
Q Consensus 220 ~~~~~~~~~al~~agl~~~did~i~~h~~gt~~-~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~ 298 (358)
....++.+++|++++++|+|||++..+ +.++. .-+.-...+...++... +..- -+ +..+++++..|-.+
T Consensus 60 ~ma~~Aa~~aL~~a~~~~~dId~li~~-s~~~~~~~p~~a~~v~~~l~~~~----~~~~----Dv-~~~C~g~~~aL~~A 129 (181)
T d1mzja1 60 VMGVAASRRALEHAGVDPAEIDLVVVS-TMTNFVHTPPLSVAIAHELGADN----AGGF----DL-SAACAGFCHALSIA 129 (181)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEE-CSCCCCCSSCHHHHHHHHHTCTT----CEEE----EE-ECGGGHHHHHHHHH
T ss_pred HHhHHHHHhhhhhccCChhHCeEEEEe-ccCCccccccHHHHHHHhhcCCC----ccce----eH-HhhhccHHHHHHHH
Confidence 455678999999999999999998876 44433 22333444555444321 1111 11 23455566666666
Q ss_pred HHHHHhCC
Q 018323 299 VLAIHHGV 306 (358)
Q Consensus 299 ~~~l~~~~ 306 (358)
...++.+.
T Consensus 130 ~~~i~~~~ 137 (181)
T d1mzja1 130 ADAVESGG 137 (181)
T ss_dssp HHHHHHSS
T ss_pred hCHhhcCC
Confidence 66677654
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=85.21 E-value=1.6 Score=33.20 Aligned_cols=78 Identities=17% Similarity=0.130 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHH
Q 018323 220 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAV 299 (358)
Q Consensus 220 ~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~ 299 (358)
.-..++.+++|++++++++|||++.+........-+.-..-+.+.++.+. ...-- + +..+++++..+..+.
T Consensus 53 ~la~~Aa~~al~~a~~~~~~Id~li~~s~~~~~~~P~~a~~v~~~Lgl~~----~~~~d----i-~~~C~g~~~al~~A~ 123 (174)
T d1hnja1 53 TMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKG----CPAFD----V-AAACAGFTYALSVAD 123 (174)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCS----SCEEE----E-CCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhcccccccccEEEEecCCccccccchhhhhhhccCCCc----hhhhh----h-hhhhccHHHHHHHHH
Confidence 34567899999999999999999877533222223344455555555421 11111 1 234455566666666
Q ss_pred HHHHhCC
Q 018323 300 LAIHHGV 306 (358)
Q Consensus 300 ~~l~~~~ 306 (358)
..++.+.
T Consensus 124 ~~i~sg~ 130 (174)
T d1hnja1 124 QYVKSGA 130 (174)
T ss_dssp HHHHTTS
T ss_pred HHHhcCC
Confidence 6666654
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=82.09 E-value=0.82 Score=39.52 Aligned_cols=77 Identities=17% Similarity=0.012 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHHHH
Q 018323 222 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLA 301 (358)
Q Consensus 222 ~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~~~ 301 (358)
..++.++||+++|++|+|||++... |.|...-+.-..-+.+.++... .+... .+.+..+++++..+-.+...
T Consensus 96 a~~Aa~~aL~~ag~~~~dId~lI~~-t~t~~~~P~~a~~v~~~LGl~~---~~~~~----~~~~~gC~g~~~aL~~A~~~ 167 (372)
T d1teda_ 96 AVDVSKRALAGLPYRAAEIGLLVLA-TSTGFIAPGVDVAIVKELGLSP---SISRV----VVNFMGCAAAMNALGTATNY 167 (372)
T ss_dssp HHHHHHHHHTTCCCCGGGEEEEEEE-ESSCCCSSCHHHHHHHHHTCCT---TCEEE----EEESCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEe-ccCCCCCchHHHHHHhhhccCC---ceeEe----eccccCccHHHHHHHHHHHH
Confidence 4578999999999999999998764 3333322322233444444321 11100 11123345666666666666
Q ss_pred HHhCC
Q 018323 302 IHHGV 306 (358)
Q Consensus 302 l~~~~ 306 (358)
++.+.
T Consensus 168 l~sg~ 172 (372)
T d1teda_ 168 VRAHP 172 (372)
T ss_dssp HHHST
T ss_pred HhcCC
Confidence 77653
|
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=80.81 E-value=1.6 Score=35.83 Aligned_cols=79 Identities=13% Similarity=0.161 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCcHHHHHHHHHHhhcccCCCCcceecccCCcCCcccchhHHHHHHHH
Q 018323 220 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAV 299 (358)
Q Consensus 220 ~~~~~~~~~al~~agl~~~did~i~~h~~gt~~~d~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~asG~~~l~~~~ 299 (358)
.-...+++++|+++||+|++||.+.+- +..+.++.....-... +... ....+|-.++ +..++||+..+..+.
T Consensus 29 dL~~~~~~~~l~~~~i~~~~Id~vi~G-~~~~~~~~~n~ar~~a-l~ag-lp~~vpa~tv-----~~~C~Sg~~Ai~~Aa 100 (268)
T d1m3ka1 29 ELGATVISAVLERAGVAAGEVNEVILG-QVLPAGEGQNPARQAA-MKAG-VPQEATAWGM-----NQLAGSGLRAVALGM 100 (268)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEE-CSCCTTSCSCHHHHHH-HHTT-CCTTSEEEEE-----ECGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEEe-eccccCcchHHHhHHH-HHhC-Ccccccceee-----cccCcccchHHHHHH
Confidence 345678999999999999999987764 3332222211111111 1111 1112332222 578899999999999
Q ss_pred HHHHhCC
Q 018323 300 LAIHHGV 306 (358)
Q Consensus 300 ~~l~~~~ 306 (358)
.+++.|.
T Consensus 101 ~~I~~G~ 107 (268)
T d1m3ka1 101 QQIATGD 107 (268)
T ss_dssp HHHHTTS
T ss_pred HHHhCCC
Confidence 9999885
|