Citrus Sinensis ID: 018353
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 357 | ||||||
| 255551531 | 360 | conserved hypothetical protein [Ricinus | 0.983 | 0.975 | 0.668 | 1e-142 | |
| 357459321 | 351 | hypothetical protein MTR_3g049330 [Medic | 0.980 | 0.997 | 0.653 | 1e-136 | |
| 359485318 | 353 | PREDICTED: uncharacterized protein LOC10 | 0.980 | 0.991 | 0.638 | 1e-135 | |
| 388523085 | 367 | unknown [Lotus japonicus] | 0.899 | 0.874 | 0.673 | 1e-134 | |
| 356553583 | 355 | PREDICTED: uncharacterized protein LOC10 | 0.896 | 0.901 | 0.685 | 1e-132 | |
| 356567743 | 361 | PREDICTED: uncharacterized protein LOC10 | 0.971 | 0.961 | 0.618 | 1e-129 | |
| 302143483 | 741 | unnamed protein product [Vitis vinifera] | 0.980 | 0.472 | 0.620 | 1e-129 | |
| 225446718 | 361 | PREDICTED: uncharacterized protein LOC10 | 0.980 | 0.969 | 0.620 | 1e-128 | |
| 356567386 | 352 | PREDICTED: uncharacterized protein LOC10 | 0.899 | 0.911 | 0.647 | 1e-128 | |
| 356566157 | 426 | PREDICTED: uncharacterized protein LOC10 | 0.971 | 0.814 | 0.610 | 1e-128 |
| >gi|255551531|ref|XP_002516811.1| conserved hypothetical protein [Ricinus communis] gi|223543899|gb|EEF45425.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/356 (66%), Positives = 287/356 (80%), Gaps = 5/356 (1%)
Query: 1 MGSVALAGTLLVVALFLHRGVYGAYELKND---NKCDIFQGKWVYDPKYPLYNASNCPFI 57
MG++ LA ++V+L +H+ V+G + N+ N CD++QG+WVYD YPLYNAS+CPFI
Sbjct: 1 MGAIGLAALSVLVSL-IHQ-VHGMQSVVNNYHKNGCDLYQGQWVYDASYPLYNASDCPFI 58
Query: 58 EQEFDCRKNGRPDNMYLKYRWKPTSCKLPRFRGGVFLERFRGKRILFVGDSISLNQWQSL 117
QEF+C+KNGRPD YL YRWKPTSC+LPRF G FL + +GK I+FVGDS+SLNQWQSL
Sbjct: 59 LQEFNCQKNGRPDKHYLSYRWKPTSCRLPRFNGKSFLLKMKGKNIMFVGDSLSLNQWQSL 118
Query: 118 TCMLHLAVPKAKYTLIRTGGLSTFSFPAHNVSVMFSRNAFLVDIVGEKSGRVLKLNSISS 177
CMLH A+P+AKYTL R GGLSTF F +NVS+M SRNA LVD V EK GRVLKL+SIS+
Sbjct: 119 NCMLHTALPEAKYTLDRVGGLSTFRFTEYNVSLMLSRNALLVDTVEEKIGRVLKLDSISN 178
Query: 178 GDLWKTADVLIFDSWHWWLHTGRKQPWDIIQDMNNTYKDMNRLVAYSKALNTWAKWVNSN 237
G+LWK D LIF+SWHWWLHTGRKQPWD IQ+ YKD++RLVAY KAL TWA+W+ N
Sbjct: 179 GELWKRVDTLIFNSWHWWLHTGRKQPWDFIQEGEKIYKDIDRLVAYEKALRTWARWIQHN 238
Query: 238 VDNSKTKVIFRGISPDHMNSSDWGDRNAKNCIGETRPVMGRSYPGGRHPAEAIVENVVRK 297
+D +KT+V F+GISPDH NS+DWG+ + KNC GET P++ +YPGG+HPAEAIVE V+R
Sbjct: 239 IDPTKTQVFFQGISPDHENSTDWGNPSRKNCRGETEPLLQPNYPGGKHPAEAIVERVLRT 298
Query: 298 ISKKVRLLNVTTLSQLRKDGHPSAYGYGGPRATDCSHWCLPGVPDTWNQLLYAVLF 353
ISK V LLN+TTLSQLRKDGHPSAYGYG +ATDCSHWCL GVPD WN+LLYA L
Sbjct: 299 ISKPVYLLNITTLSQLRKDGHPSAYGYGDRQATDCSHWCLAGVPDAWNELLYAALI 354
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357459321|ref|XP_003599941.1| hypothetical protein MTR_3g049330 [Medicago truncatula] gi|355488989|gb|AES70192.1| hypothetical protein MTR_3g049330 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|359485318|ref|XP_002278078.2| PREDICTED: uncharacterized protein LOC100267770 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|388523085|gb|AFK49604.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
| >gi|356553583|ref|XP_003545134.1| PREDICTED: uncharacterized protein LOC100799085 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356567743|ref|XP_003552076.1| PREDICTED: uncharacterized protein LOC100810342 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|302143483|emb|CBI22044.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225446718|ref|XP_002282459.1| PREDICTED: uncharacterized protein LOC100262536 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356567386|ref|XP_003551901.1| PREDICTED: uncharacterized protein LOC100802364 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356566157|ref|XP_003551301.1| PREDICTED: uncharacterized protein LOC100785226 [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 357 | ||||||
| TAIR|locus:2041574 | 367 | TBL39 "AT2G42570" [Arabidopsis | 0.896 | 0.871 | 0.565 | 6.5e-106 | |
| TAIR|locus:2037498 | 359 | TBL42 "TRICHOME BIREFRINGENCE- | 0.901 | 0.896 | 0.556 | 5.3e-104 | |
| TAIR|locus:2029959 | 380 | TBL38 "AT1G29050" [Arabidopsis | 0.887 | 0.834 | 0.545 | 1.1e-103 | |
| TAIR|locus:2099402 | 356 | TBL41 "TRICHOME BIREFRINGENCE- | 0.885 | 0.887 | 0.548 | 2.7e-100 | |
| TAIR|locus:2055878 | 364 | AT2G31110 "AT2G31110" [Arabido | 0.907 | 0.890 | 0.530 | 1.5e-99 | |
| TAIR|locus:2055425 | 385 | TBL37 "AT2G34070" [Arabidopsis | 0.901 | 0.836 | 0.525 | 3.9e-99 | |
| TAIR|locus:2178813 | 402 | PMR5 "AT5G58600" [Arabidopsis | 0.907 | 0.805 | 0.474 | 2.4e-85 | |
| TAIR|locus:2080280 | 379 | TBL36 "AT3G54260" [Arabidopsis | 0.890 | 0.839 | 0.401 | 6.5e-67 | |
| TAIR|locus:2045688 | 398 | TBL45 "AT2G30010" [Arabidopsis | 0.823 | 0.738 | 0.420 | 2.2e-66 | |
| TAIR|locus:2096094 | 475 | TBL6 "AT3G62390" [Arabidopsis | 0.893 | 0.671 | 0.398 | 7.4e-66 |
| TAIR|locus:2041574 TBL39 "AT2G42570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1048 (374.0 bits), Expect = 6.5e-106, P = 6.5e-106
Identities = 182/322 (56%), Positives = 231/322 (71%)
Query: 32 KCDIFQGKWVYDPKYPLYNASNCPFIEQEFDCRKNGRPDNMYLKYRWKPTSCKLPRFRGG 91
+C+ F+G WVYD KYPLY+ CPFI+ +F+C+K GRPDN YLKYRW+P+SC LPRF G
Sbjct: 46 RCNWFRGNWVYDVKYPLYDPYKCPFIDPQFNCKKYGRPDNAYLKYRWQPSSCSLPRFNGL 105
Query: 92 VFLERFRGKRILFVGDSISLNQWQSLTCMLHLAVPKAKYTLIRTGGLSTFSFPAHNVSVM 151
FL R RGK+I+FVGDS+S N WQSL C++H VP +YTLIR GL++ +F + V+++
Sbjct: 106 YFLRRMRGKKIMFVGDSLSTNMWQSLACLIHSWVPNTRYTLIRQKGLASLTFEEYGVTLL 165
Query: 152 FSRNAFLVDIVGEKSGRVLKLNSISSGDLWKTADVLIFDSWHWWLHTGRKQPWDIIQDMN 211
R FLVD+ EK GRVLKL+SI G++W+ DVLIF+SWHWW HT QPWD ++D N
Sbjct: 166 LYRTQFLVDLNVEKVGRVLKLDSIKQGNMWRGMDVLIFNSWHWWTHTEHIQPWDYMEDGN 225
Query: 212 NTYKDMNRLVAYSKALNTWAKWVNSNVDNSKTKVIFRGISPDHMNSSDWGDRNAKNCIGE 271
YKDMNRLVA+ K + TWA+WVN+ VD SKTKV F G+SP H DWG+ +C +
Sbjct: 226 RLYKDMNRLVAFYKGMTTWARWVNAYVDPSKTKVFFNGVSPTHYEGKDWGEP-MNSCRSQ 284
Query: 272 TRPVMGRSYPGGRHPAEAIVENVVRKISKKVRLLNVTTLSQLRKDGHPSAYGYGGPRATD 331
T+P GR YPGG A I+ V+R++ K V L++T LSQLRKD HPSA+ P D
Sbjct: 285 TQPFYGRKYPGGTPMAWVILNKVMRRLKKPVHWLDITGLSQLRKDAHPSAFSGNHP-GND 343
Query: 332 CSHWCLPGVPDTWNQLLYAVLF 353
CSHWCLPG+PDTWN L Y+ LF
Sbjct: 344 CSHWCLPGLPDTWNLLFYSTLF 365
|
|
| TAIR|locus:2037498 TBL42 "TRICHOME BIREFRINGENCE-LIKE 42" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2029959 TBL38 "AT1G29050" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2099402 TBL41 "TRICHOME BIREFRINGENCE-LIKE 41" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2055878 AT2G31110 "AT2G31110" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2055425 TBL37 "AT2G34070" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2080280 TBL36 "AT3G54260" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2045688 TBL45 "AT2G30010" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2096094 TBL6 "AT3G62390" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 357 | |||
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 1e-130 | |
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 1e-107 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 2e-27 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
Score = 376 bits (968), Expect = e-130
Identities = 167/338 (49%), Positives = 220/338 (65%), Gaps = 13/338 (3%)
Query: 29 NDNKCDIFQGKWVYDPKYPLYNASNCP-FIEQEFDCRKNGRPDNMYLKYRWKPTSCKLPR 87
N + C +F G WV D YPLY +S+CP I+ EF+C+ GRPD+ YLKYRW+P +C+LPR
Sbjct: 49 NQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPR 108
Query: 88 FRGGVFLERFRGKRILFVGDSISLNQWQSLTCMLHLAVPKAKYTLIRTGGLSTFSFPAHN 147
F G FL + +GK ++FVGDS+ NQW+SL C++ +VP + + R LSTF F +
Sbjct: 109 FNGLEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYG 168
Query: 148 VSVMFSRNAFLVDIVGEKSGRVLKLNSIS-SGDLWKTADVLIFDSWHWWLHTGRKQPWDI 206
VS+ F + +LVDI + RVLKL IS + + W+ ADVLIF++ HWW H G Q WD
Sbjct: 169 VSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQGWDY 228
Query: 207 IQDMNNTYKDMNRLVAYSKALNTWAKWVNSNVDNSKTKVIFRGISPDHMNSSDWGDRNA- 265
I+ Y+DM+RLVA KAL TWA WV++NVD S+T+V F+ ISP H N S+W +
Sbjct: 229 IESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGAST 288
Query: 266 --KNCIGETRPVMGRSYPGGRHPAEAIVENVVRKISKKVRLLNVTTLSQLRKDGHPSAY- 322
KNC GET P+ G +YPG +V+ V+R + LL++T LS+LRKDGHPS Y
Sbjct: 289 TTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYS 348
Query: 323 GYGGP-------RATDCSHWCLPGVPDTWNQLLYAVLF 353
G P R+ DCSHWCLPG+PDTWNQL Y LF
Sbjct: 349 GDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALF 386
|
Length = 387 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 357 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.93 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 98.67 | |
| cd01829 | 200 | SGNH_hydrolase_peri2 SGNH_peri2; putative periplas | 96.56 | |
| cd01841 | 174 | NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa | 96.55 | |
| cd01834 | 191 | SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG | 96.52 | |
| cd01820 | 214 | PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A | 92.67 | |
| cd01832 | 185 | SGNH_hydrolase_like_1 Members of the SGNH-hydrolas | 92.48 | |
| COG2845 | 354 | Uncharacterized protein conserved in bacteria [Fun | 92.27 | |
| cd01827 | 188 | sialate_O-acetylesterase_like1 sialate O-acetylest | 90.18 | |
| cd01833 | 157 | XynB_like SGNH_hydrolase subfamily, similar to Rum | 86.04 | |
| cd01825 | 189 | SGNH_hydrolase_peri1 SGNH_peri1; putative periplas | 85.61 | |
| cd01821 | 198 | Rhamnogalacturan_acetylesterase_like Rhamnogalactu | 80.22 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-112 Score=821.93 Aligned_cols=327 Identities=50% Similarity=1.002 Sum_probs=301.1
Q ss_pred cCCCCCCCCccCceeeCCCCCCCCCCCCC-CcccccccccCCCCCCccccceeecCCCCCCCCChHHHHHHHcCCeEEEE
Q 018353 27 LKNDNKCDIFQGKWVYDPKYPLYNASNCP-FIEQEFDCRKNGRPDNMYLKYRWKPTSCKLPRFRGGVFLERFRGKRILFV 105 (357)
Q Consensus 27 ~~~~~~Cd~~~G~WV~d~~~p~Y~~~~Cp-~i~~~~~C~~nGrpd~~y~~wrWqP~~C~l~~fd~~~fl~~lrgk~i~Fv 105 (357)
..+.+.||+|+|+||+|+++|+|++.+|| +|++++||++|||||.+|++|||||++|+||||||.+||+.||||+|+||
T Consensus 47 ~~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FV 126 (387)
T PLN02629 47 QANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFV 126 (387)
T ss_pred CCCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEe
Confidence 45678899999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred echhhHHHHHHHHHhhhccCCCCeeeeeecCceeeEEeccCCeEEEEEeecceeecccccccceEEeccCCCC-CCcccc
Q 018353 106 GDSISLNQWQSLTCMLHLAVPKAKYTLIRTGGLSTFSFPAHNVSVMFSRNAFLVDIVGEKSGRVLKLNSISSG-DLWKTA 184 (357)
Q Consensus 106 GDS~~Rq~~~SL~clL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLv~~~~~~~~~~l~lD~~~~~-~~~~~~ 184 (357)
||||+|||||||+|||++++|..+......++...|+|++||+||+||||||||+.+.....++++||+++.. +.|.++
T Consensus 127 GDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~~~~~l~LD~id~~a~~w~~~ 206 (387)
T PLN02629 127 GDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDA 206 (387)
T ss_pred ccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCCCceeEEecCcchhhhhhccC
Confidence 9999999999999999998887655555667788999999999999999999999876665678999999865 789999
Q ss_pred cEEEEeccccccccCCCCCcceeccCccccccccHHHHHHHHHHHHHHHHHhccCCCCceEEEEecCCCCCCCCCCCCCC
Q 018353 185 DVLIFDSWHWWLHTGRKQPWDIIQDMNNTYKDMNRLVAYSKALNTWAKWVNSNVDNSKTKVIFRGISPDHMNSSDWGDRN 264 (357)
Q Consensus 185 DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~v~~~~~~~~~~Vf~Rt~sP~Hf~~g~W~~g~ 264 (357)
||||||+||||.+.+..++++|++.|+.++++|++.+||++||+||++||++++++.+++|||||+||+||+||+||+|+
T Consensus 207 DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~Hfe~g~Wn~gg 286 (387)
T PLN02629 207 DVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGA 286 (387)
T ss_pred CEEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCcccccCCCcCCCC
Confidence 99999999999998888899999999999999999999999999999999999988899999999999999999999983
Q ss_pred ---CCCCCCCcccCCCCCCCCCCChHHHHHHHHHHhhCCceEEeecccccccccCCCCCCCCCC--------CCCCCCee
Q 018353 265 ---AKNCIGETRPVMGRSYPGGRHPAEAIVENVVRKISKKVRLLNVTTLSQLRKDGHPSAYGYG--------GPRATDCS 333 (357)
Q Consensus 265 ---~g~C~~~t~P~~~~~~~~~~~~~~~i~~~~~~~~~~~v~lLDit~ls~~R~D~Hp~~y~~~--------~~~~~DC~ 333 (357)
+|+|+++|+|+.++++.++...+++++++++++++.+|++||||+||++|||||||+|+.. ...++||+
T Consensus 287 ~~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~DgHPs~Y~~~~~~~~~~~p~~~~DC~ 366 (387)
T PLN02629 287 STTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGDLSPSQRANPDRSADCS 366 (387)
T ss_pred CCCCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCceEEEechhhhhcCCCCCcccccCCCchhhccCCCCCCCcc
Confidence 3679999999997777766666778999999999999999999999999999999999642 13468999
Q ss_pred eecCCChhhHHHHHHHHHhC
Q 018353 334 HWCLPGVPDTWNQLLYAVLF 353 (357)
Q Consensus 334 HwClPGv~D~Wn~lL~~~L~ 353 (357)
||||||||||||||||++|+
T Consensus 367 HWCLPGvpDTWNelL~a~L~ 386 (387)
T PLN02629 367 HWCLPGLPDTWNQLFYTALF 386 (387)
T ss_pred cccCCCCCccHHHHHHHHHh
Confidence 99999999999999999986
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases | Back alignment and domain information |
|---|
| >cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >COG2845 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB | Back alignment and domain information |
|---|
| >cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 357 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.2 bits (106), Expect = 3e-05
Identities = 51/396 (12%), Positives = 103/396 (26%), Gaps = 131/396 (33%)
Query: 26 ELKNDNKCDIFQGKWVYDPKYPLYNASNCPFIEQEFDCR----------KNGRPDNMYLK 75
E + K DI V++ F++ FDC+ D++ +
Sbjct: 13 EHQYQYK-DILS---VFEDA----------FVD-NFDCKDVQDMPKSILSKEEIDHIIMS 57
Query: 76 YRWKPTSCKLPRFRGGVFLERFRGKRIL--FVGDSISLN-QWQSLTCMLHLAVPKAKYTL 132
+ L + + ++ FV + + +N ++ L P
Sbjct: 58 ----KDAVSGTLRLFWTLLSK--QEEMVQKFVEEVLRINYKF--------LMSPIKTEQR 103
Query: 133 IRTGGLSTFS------------FPAHNVS----VMFSRNAFL-------VDIVGEK-SGR 168
+ + F +NVS + R A L V I G SG+
Sbjct: 104 QPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK 163
Query: 169 -VLKLNSISSGDLWKTADVLIFDSWHWWLHTGRKQ-PWDIIQDMNNTYKDM--------- 217
+ L+ S + D IF WL+ P +++ + +
Sbjct: 164 TWVALDVCLSYKVQCKMDFKIF-----WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD 218
Query: 218 ----------------NRLVA---YSKAL----NTWAKWVNSNVD-NSKTKVIFRGISPD 253
RL+ Y L N + + + K + R
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTR----- 273
Query: 254 HMNSSDWGDRNAKNCIGETRPVMGRSYPGGRHPAEAIVENVVRKISKKVRLLNVTTLSQL 313
+ + + ++ H + + + V+ + K L +
Sbjct: 274 --------FKQVTDFLSAAT----TTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPRE 321
Query: 314 RKDGHPSAYGYGGPRATDCSHWCLPGVPDTWNQLLY 349
+P D TW+ +
Sbjct: 322 VLTTNPRRLSIIAESIRD--------GLATWDNWKH 349
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 357 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 97.45 | |
| 3p94_A | 204 | GDSL-like lipase; serine hydrolase, catalytic tria | 94.85 | |
| 2hsj_A | 214 | Putative platelet activating factor; structr genom | 92.5 | |
| 4hf7_A | 209 | Putative acylhydrolase; PF13472 family, structural | 80.58 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00015 Score=63.03 Aligned_cols=91 Identities=12% Similarity=0.116 Sum_probs=54.7
Q ss_pred ccEEEEeccccccccCCCCCcceeccCccccccccHHHHHHHHHHHHHHHHHhccCCCCceEEEEecCCCCCCCCCCCCC
Q 018353 184 ADVLIFDSWHWWLHTGRKQPWDIIQDMNNTYKDMNRLVAYSKALNTWAKWVNSNVDNSKTKVIFRGISPDHMNSSDWGDR 263 (357)
Q Consensus 184 ~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~v~~~~~~~~~~Vf~Rt~sP~Hf~~g~W~~g 263 (357)
+|+|||+.|..=... -.+.|++.++++++.+.+. .+++++++-+..|..... +
T Consensus 75 pd~Vvi~~G~ND~~~--------------------~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~~~~--~--- 127 (200)
T 4h08_A 75 FDVIHFNNGLHGFDY--------------------TEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVRTGE--G--- 127 (200)
T ss_dssp CSEEEECCCSSCTTS--------------------CHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCEESG--G---
T ss_pred CCeEEEEeeeCCCCC--------------------CHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCcccc--c---
Confidence 799999999763210 1356788888888877552 467889999988865211 0
Q ss_pred CCCCCCCCcccCCCCCCCCCCChHHHHHHHHHHhhCCceEEeeccccccc
Q 018353 264 NAKNCIGETRPVMGRSYPGGRHPAEAIVENVVRKISKKVRLLNVTTLSQL 313 (357)
Q Consensus 264 ~~g~C~~~t~P~~~~~~~~~~~~~~~i~~~~~~~~~~~v~lLDit~ls~~ 313 (357)
+....+. . ......+++++++.++ ..+.++|++..+.-
T Consensus 128 --~~~~~~~---~-----~~~~~~n~~~~~~a~~--~~v~~iD~~~~~~~ 165 (200)
T 4h08_A 128 --MKEFAPI---T-----ERLNVRNQIALKHINR--ASIEVNDLWKVVID 165 (200)
T ss_dssp --GCEECTH---H-----HHHHHHHHHHHHHHHH--TTCEEECHHHHHTT
T ss_pred --ccccchh---H-----HHHHHHHHHHHHHhhh--cceEEEecHHhHhc
Confidence 0000000 0 0001235667777766 45899999876653
|
| >3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis} | Back alignment and structure |
|---|
| >2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3 | Back alignment and structure |
|---|
| >4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 357 | |||
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 97.14 | |
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 96.89 | |
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 83.23 |
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: YxiM C-terminal domain-like domain: Hypothetical protein YxiM species: Bacillus subtilis [TaxId: 1423]
Probab=97.14 E-value=0.00085 Score=56.44 Aligned_cols=91 Identities=11% Similarity=0.085 Sum_probs=48.8
Q ss_pred cccEEEEeccccccccCCCCCcceeccCccccccccHHHHHHHHHHHHHHHHHhccCCCCceEEEEecCCCCCCCCCCCC
Q 018353 183 TADVLIFDSWHWWLHTGRKQPWDIIQDMNNTYKDMNRLVAYSKALNTWAKWVNSNVDNSKTKVIFRGISPDHMNSSDWGD 262 (357)
Q Consensus 183 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~v~~~~~~~~~~Vf~Rt~sP~Hf~~g~W~~ 262 (357)
..|+|||..|.-=... .+ ....+.|+..++++++-+.+ ....+++-+..| ++.. .+..
T Consensus 71 ~~D~vvi~~G~ND~~~----------~~------~~~~~~~~~~l~~li~~~~~----~~~~~vl~~~~~-~~~~-~~~~ 128 (208)
T d2o14a2 71 PGDYFMLQLGINDTNP----------KH------KESEAEFKEVMRDMIRQVKA----KGADVILSTPQG-RATD-FTSE 128 (208)
T ss_dssp TTCEEEEECCTGGGCG----------GG------CCCHHHHHHHHHHHHHHHHT----TTCEEEEECCCC-CTTC-BCTT
T ss_pred CCCEEEEEcCCCcccc----------cc------cccHHHHHHHHHHHHHHHHh----cCCceeeccccc-cccc-cccc
Confidence 4699999998652210 01 11245788888888876643 234455544333 2110 0000
Q ss_pred CCCCCCCCCcccCCCCCCCCCCChHHHHHHHHHHhhCCceEEeecccccc
Q 018353 263 RNAKNCIGETRPVMGRSYPGGRHPAEAIVENVVRKISKKVRLLNVTTLSQ 312 (357)
Q Consensus 263 g~~g~C~~~t~P~~~~~~~~~~~~~~~i~~~~~~~~~~~v~lLDit~ls~ 312 (357)
....+ .....+++++++.++ ..+.++|++.++.
T Consensus 129 -------~~~~~--------~~~~~~~~~~~~a~~--~~v~~vD~~~~~~ 161 (208)
T d2o14a2 129 -------GIHSS--------VNRWYRASILALAEE--EKTYLIDLNVLSS 161 (208)
T ss_dssp -------SCBCC--------TTSTTHHHHHHHHHH--TTCEEECHHHHHH
T ss_pred -------cchHH--------HHHHHHHHHHHhhcc--CCcEEeccHHHHH
Confidence 01000 012346778888777 4588999987764
|
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|