Citrus Sinensis ID: 018362


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------
MINFQSCAHKFLLTISLFLLLPITSAAASSTCTCDEAEAQEHKTTEALKYKLVAIVSILIASAAGVSLPFLVKKVSYLSPDKDVFFLIKAFAAGVILATGFIHILPDAFESLTSPCLCENPWHKFPFAGFIAMMSSIGTLMMEAYATGYHKRTELRKAQPFDGDEESDHDHDQQGVHAGHVHGSSFVPEPTNSSDLIRNRIISQILELGIVIHSVIIGISLGASERASTIKPLVAALSFHQFFEGTGLGGCISQAKFNYTAISIMVLFFSLTTPAGIAVGIGISKIYDQSSPTALIVQGLLNSASAGILTYMALVDLLAADFMNPKMLSNIRLQIGANFTVLLGASCMCFLAKLEEH
cccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHcccHHHHHHHHHccHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccc
ccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcEEEEEEEEEEEccccccccccHHHHHHHHHHHHHHcccccHHHHHccccccHHHEEHHHHHHHcHHHHHHHHEEccccccccccHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHcccHHHHHHHHHHHHHHHHHHHHHHHHccc
MINFQSCAHKFLLTISLFLLLpitsaaasstctcdeaeaQEHKTTEALKYKLVAIVSILIASAAGVSLPFLVKKvsylspdkdVFFLIKAFAAGVILATGFIhilpdafesltspclcenpwhkfpfaGFIAMMSSIGTLMMEAYATGYhkrtelrkaqpfdgdeesdhdhdqqgvhaghvhgssfvpeptnssdlIRNRIISQILELGIVIHSVIIGISLGASERASTIKPLVAALSFhqffegtglggcisqakfNYTAISIMVLFFslttpagiAVGIGISkiydqssptALIVQGLLNSASAGILTYMALVDLLAAdfmnpkmlSNIRLQIGANFTVLLGASCMCFLAKLEEH
MINFQSCAHKFLLTISLFLLLPITSAAASSTCTCDEAEAQEHKTTEALKYKLVAIVSILIASAAGVSLPFLVKKVSYLSPDKDVFFLIKAFAAGVILATGFIHILPDAFESLTSPCLCENPWHKFPFAGFIAMMSSIGTLMMEAYATGYHKRTELRKAQPFDGDEESDHDHDQQGVHAGHVHGSSFVPEPTNSSDLIRNRIISQILELGIVIHSVIIGISLGASERASTIKPLVAALSFHQFFEGTGLGGCISQAKFNYTAISIMVLFFSLTTPAGIAVGIGISKIYDQSSPTALIVQGLLNSASAGILTYMALVDLLAADFMNPKMLSNIRLQIGANFTVLLGASCMCFLAKLEEH
MINFQSCAHKflltislflllpitsAAASSTCTCDEAEAQEHKTTEALKYKlvaivsiliasaagvslPFLVKKVSYLSPDKDVFFLIKAFAAGVILATGFIHILPDAFESLTSPCLCENPWHKFPFAGFIAMMSSIGTLMMEAYATGYHKRTELRKAQPFDGDEESDHDHDQQGVHAGHVHGSSFVPEPTNSSDLIRNRIISQILElgivihsviigislGASERASTIKPLVAALSFHQFFEGTGLGGCISQAKFNYTAISIMVLFFSLTTPAGIAVGIGISKIYDQSSPTALIVQGLLNSASAGILTYMALVDLLAADFMNPKMLSNIRLQIGANFTVLLGASCMCFLAKLEEH
***FQSCAHKFLLTISLFLLLPITSAAASSTCTCDEAEAQEHKTTEALKYKLVAIVSILIASAAGVSLPFLVKKVSYLSPDKDVFFLIKAFAAGVILATGFIHILPDAFESLTSPCLCENPWHKFPFAGFIAMMSSIGTLMMEAYATGYHK*********************************************IRNRIISQILELGIVIHSVIIGISLGASERASTIKPLVAALSFHQFFEGTGLGGCISQAKFNYTAISIMVLFFSLTTPAGIAVGIGISKIYDQSSPTALIVQGLLNSASAGILTYMALVDLLAADFMNPKMLSNIRLQIGANFTVLLGASCMCFLAK****
********HKFLLTISLFLLLPIT*******************TTEALKYKLVAIVSILIASAAGVSLPFLVKKVSYLSPDKDVFFLIKAFAAGVILATGFIHILPDAFESLTSPCLCENPWHKFPFAGFIAMMSSIGTLMMEAYATGYHKRTELRKAQPFDGDEESDHDHDQQGVHAG*********************IISQILELGIVIHSVIIGISLGASERASTIKPLVAALSFHQFFEGTGLGGCISQAKFNYTAISIMVLFFSLTTPAGIAVGIGISKIYDQSSPTALIVQGLLNSASAGILTYMALVDLLAADFMNPKMLSNIRLQIGANFTVLLGASCMCFLAKLEE*
MINFQSCAHKFLLTISLFLLLPITSAAA***********QEHKTTEALKYKLVAIVSILIASAAGVSLPFLVKKVSYLSPDKDVFFLIKAFAAGVILATGFIHILPDAFESLTSPCLCENPWHKFPFAGFIAMMSSIGTLMMEAYATGYHKRTELRKAQ*****************HAGHVHGSSFVPEPTNSSDLIRNRIISQILELGIVIHSVIIGISLGASERASTIKPLVAALSFHQFFEGTGLGGCISQAKFNYTAISIMVLFFSLTTPAGIAVGIGISKIYDQSSPTALIVQGLLNSASAGILTYMALVDLLAADFMNPKMLSNIRLQIGANFTVLLGASCMCFLAKLEEH
***FQSCAHKFLLTISLFLLLPITSAAASSTCTCDEAEAQEHKTTEALKYKLVAIVSILIASAAGVSLPFLVKKVSYLSPDKDVFFLIKAFAAGVILATGFIHILPDAFESLTSPCLCENPWHKFPFAGFIAMMSSIGTLMMEAYATGYHKRTEL*************************************SSDLIRNRIISQILELGIVIHSVIIGISLGASERASTIKPLVAALSFHQFFEGTGLGGCISQAKFNYTAISIMVLFFSLTTPAGIAVGIGISKIYDQSSPTALIVQGLLNSASAGILTYMALVDLLAADFMNPKMLSNIRLQIGANFTVLLGASCMCFLAKLEEH
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiii
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooo
iiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MINFQSCAHKFLLTISLFLLLPITSAAASSTCTCDEAEAQEHKTTEALKYKLVAIVSILIASAAGVSLPFLVKKVSYLSPDKDVFFLIKAFAAGVILATGFIHILPDAFESLTSPCLCENPWHKFPFAGFIAMMSSIGTLMMEAYATGYHKRTELRKAQPFDGDEESDHDHDQQGVHAGHVHGSSFVPEPTNSSDLIRNRIISQILELGIVIHSVIIGISLGASERASTIKPLVAALSFHQFFEGTGLGGCISQAKFNYTAISIMVLFFSLTTPAGIAVGIGISKIYDQSSPTALIVQGLLNSASAGILTYMALVDLLAADFMNPKMLSNIRLQIGANFTVLLGASCMCFLAKLEEH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query357 2.2.26 [Sep-21-2011]
Q6L8G0353 Zinc transporter 5 OS=Ory yes no 0.918 0.929 0.541 9e-98
O81123355 Zinc transporter 1 OS=Ara yes no 0.929 0.935 0.5 2e-92
O23039360 Zinc transporter 5 OS=Ara no no 0.913 0.905 0.526 2e-90
Q7XLD4364 Zinc transporter 3 OS=Ory no no 0.949 0.931 0.490 2e-90
Q75HB1374 Fe(2+) transport protein no no 0.918 0.877 0.485 1e-87
A3BI11390 Zinc transporter 8 OS=Ory no no 0.840 0.769 0.529 3e-87
Q6L8G1370 Fe(2+) transport protein no no 0.901 0.870 0.495 3e-86
Q8W246365 Zinc transporter 7 OS=Ara no no 0.946 0.926 0.474 4e-85
Q9SLG3339 Zinc transporter 3 OS=Ara no no 0.904 0.952 0.484 4e-83
Q8W245364 Probable zinc transporter no no 0.952 0.934 0.449 2e-82
>sp|Q6L8G0|ZIP5_ORYSJ Zinc transporter 5 OS=Oryza sativa subsp. japonica GN=ZIP5 PE=2 SV=1 Back     alignment and function desciption
 Score =  357 bits (915), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 181/334 (54%), Positives = 233/334 (69%), Gaps = 6/334 (1%)

Query: 21  LPITSAAASSTCTCDEAEAQEHKTTEALKYKLVAIVSILIASAAGVSLPFLVKKVSYLSP 80
           LP  +AAA   C  D A   +    +AL+ K++AI  IL  S  G +LP L  +   + P
Sbjct: 21  LPAHAAAAECDCATDTAGRDK---AQALRLKVIAIFCILAGSTVGAALPSLGGRFPAIQP 77

Query: 81  DKDVFFLIKAFAAGVILATGFIHILPDAFESLTSPCLCENPWHKFPFAGFIAMMSSIGTL 140
           + DVF  +KAFA GVILATG +HILP AFE+L+SPCL   PW +FPFAG +AM+S+IGTL
Sbjct: 78  ETDVFLSVKAFAGGVILATGLVHILPAAFEALSSPCLVGGPWKRFPFAGMVAMVSAIGTL 137

Query: 141 MMEAYATGYHKRTELRKAQPFDGDEESDHDHDQQGVHA-GHVHGSSFVP-EPTNSSDLIR 198
           +++  ATGY  RT+ ++      DE +D D +    H+ GH HG S +   P    DL+R
Sbjct: 138 IVDTVATGYFHRTDAKRKAAAVADEPAD-DLEASDEHSHGHAHGMSVMSVAPAGEEDLVR 196

Query: 199 NRIISQILELGIVIHSVIIGISLGASERASTIKPLVAALSFHQFFEGTGLGGCISQAKFN 258
           +R+ISQ+LELG+V+HS+IIG+SLGAS+  ST++PLV AL+FHQFFEG GLGGCI QAKF 
Sbjct: 197 HRVISQVLELGVVVHSLIIGMSLGASDFPSTVRPLVPALTFHQFFEGIGLGGCIVQAKFR 256

Query: 259 YTAISIMVLFFSLTTPAGIAVGIGISKIYDQSSPTALIVQGLLNSASAGILTYMALVDLL 318
             ++  M LFFSLTTPAGI VGIGIS +YD +SPTAL+VQGLL +A+AGIL YMALVD+L
Sbjct: 257 VRSVVTMALFFSLTTPAGIVVGIGISSVYDANSPTALVVQGLLEAAAAGILVYMALVDIL 316

Query: 319 AADFMNPKMLSNIRLQIGANFTVLLGASCMCFLA 352
           A DFM  K+    RLQ+  N  +LLGA  M  +A
Sbjct: 317 AEDFMKTKVQRRGRLQLAMNVALLLGAGLMSMIA 350




Zinc transporter that mediates zinc uptake from the rhizosphere and may be responsible for the translocation of zinc within the plant.
Oryza sativa subsp. japonica (taxid: 39947)
>sp|O81123|ZIP1_ARATH Zinc transporter 1 OS=Arabidopsis thaliana GN=ZIP1 PE=2 SV=1 Back     alignment and function description
>sp|O23039|ZIP5_ARATH Zinc transporter 5 OS=Arabidopsis thaliana GN=ZIP5 PE=2 SV=1 Back     alignment and function description
>sp|Q7XLD4|ZIP3_ORYSJ Zinc transporter 3 OS=Oryza sativa subsp. japonica GN=ZIP3 PE=1 SV=2 Back     alignment and function description
>sp|Q75HB1|IRT1_ORYSJ Fe(2+) transport protein 1 OS=Oryza sativa subsp. japonica GN=IRT1 PE=2 SV=1 Back     alignment and function description
>sp|A3BI11|ZIP8_ORYSJ Zinc transporter 8 OS=Oryza sativa subsp. japonica GN=ZIP8 PE=2 SV=1 Back     alignment and function description
>sp|Q6L8G1|IRT2_ORYSJ Fe(2+) transport protein 2 OS=Oryza sativa subsp. japonica GN=IRT2 PE=2 SV=1 Back     alignment and function description
>sp|Q8W246|ZIP7_ARATH Zinc transporter 7 OS=Arabidopsis thaliana GN=ZIP7 PE=2 SV=1 Back     alignment and function description
>sp|Q9SLG3|ZIP3_ARATH Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3 PE=2 SV=1 Back     alignment and function description
>sp|Q8W245|ZIP10_ARATH Probable zinc transporter 10 OS=Arabidopsis thaliana GN=ZIP10 PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query357
225423617348 PREDICTED: zinc transporter 5 isoform 1 0.935 0.959 0.710 1e-134
359473092345 PREDICTED: zinc transporter 1-like [Viti 0.904 0.936 0.649 1e-119
147860030397 hypothetical protein VITISV_029537 [Viti 0.904 0.813 0.649 1e-119
255573599355 zinc/iron transporter, putative [Ricinus 0.899 0.904 0.659 1e-118
297738016 522 unnamed protein product [Vitis vinifera] 0.907 0.620 0.645 1e-116
359494680360 PREDICTED: zinc transporter 1 isoform 2 0.907 0.9 0.634 1e-116
147835350360 hypothetical protein VITISV_008114 [Viti 0.907 0.9 0.631 1e-116
359494678360 PREDICTED: zinc transporter 1 isoform 1 0.907 0.9 0.631 1e-116
147835351360 hypothetical protein VITISV_008115 [Viti 0.907 0.9 0.631 1e-116
255582726359 zinc/iron transporter, putative [Ricinus 0.918 0.913 0.627 1e-115
>gi|225423617|ref|XP_002274548.1| PREDICTED: zinc transporter 5 isoform 1 [Vitis vinifera] gi|147860029|emb|CAN83128.1| hypothetical protein VITISV_029536 [Vitis vinifera] gi|381282974|gb|AFG19376.1| zinc transporter protein [Vitis vinifera] Back     alignment and taxonomy information
 Score =  483 bits (1243), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 243/342 (71%), Positives = 282/342 (82%), Gaps = 8/342 (2%)

Query: 12  LLTISLFLLLPITSAAASSTCTCDEAEAQEHKTTEALKYKLVAIVSILIASAAGVSLPFL 71
           +LTIS  L+L       SS CTC E + ++   ++A+ YKLVAI SIL++SA GV LP L
Sbjct: 11  ILTISSLLIL-FQPLLVSSLCTC-ETQHKDQNASQAVTYKLVAIASILVSSAIGVCLPLL 68

Query: 72  VKKVSYLSPDKDVFFLIKAFAAGVILATGFIHILPDAFESLTSPCLCENPWHKFPFAGFI 131
           +K V  L P+K ++FLIKAFAAGVILATGF+HILPDA++SL SPCL ENPW  FPF GFI
Sbjct: 69  LKNVPSLRPEKAIYFLIKAFAAGVILATGFLHILPDAYDSLKSPCLSENPWGGFPFTGFI 128

Query: 132 AMMSSIGTLMMEAYATGYHKRTELRKAQPFDGDEESDHDHDQQGVHAGHVHGSSFVPEPT 191
           AMM++I TLMMEA+ATGYH+R+ELRKAQP +GDEESD DH      AGHVHGS+FV E +
Sbjct: 129 AMMAAILTLMMEAFATGYHRRSELRKAQPVNGDEESDGDH------AGHVHGSAFVLERS 182

Query: 192 NSSDLIRNRIISQILELGIVIHSVIIGISLGASERASTIKPLVAALSFHQFFEGTGLGGC 251
           NSSDLIR+R++SQ+LELGIV+HSVIIGISLGASE   TIKPLVAALSFHQFFEG GLGGC
Sbjct: 183 NSSDLIRHRVVSQVLELGIVVHSVIIGISLGASESPKTIKPLVAALSFHQFFEGMGLGGC 242

Query: 252 ISQAKFNYTAISIMVLFFSLTTPAGIAVGIGISKIYDQSSPTALIVQGLLNSASAGILTY 311
           ISQAK+   A  IMVLFFSLTTP GIAVG+GISKIYD++SPTALIVQG+LNSASAGIL Y
Sbjct: 243 ISQAKYKIKATIIMVLFFSLTTPTGIAVGLGISKIYDENSPTALIVQGVLNSASAGILIY 302

Query: 312 MALVDLLAADFMNPKMLSNIRLQIGANFTVLLGASCMCFLAK 353
           MALVDLLA DFMNPKM SN+RLQ+GA  T+LLGA+ M  LAK
Sbjct: 303 MALVDLLATDFMNPKMQSNVRLQLGAYATLLLGAASMSVLAK 344




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359473092|ref|XP_002275820.2| PREDICTED: zinc transporter 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147860030|emb|CAN83129.1| hypothetical protein VITISV_029537 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255573599|ref|XP_002527722.1| zinc/iron transporter, putative [Ricinus communis] gi|223532863|gb|EEF34635.1| zinc/iron transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297738016|emb|CBI27217.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359494680|ref|XP_003634821.1| PREDICTED: zinc transporter 1 isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147835350|emb|CAN72264.1| hypothetical protein VITISV_008114 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359494678|ref|XP_002264603.2| PREDICTED: zinc transporter 1 isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147835351|emb|CAN72265.1| hypothetical protein VITISV_008115 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255582726|ref|XP_002532140.1| zinc/iron transporter, putative [Ricinus communis] gi|223528176|gb|EEF30239.1| zinc/iron transporter, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query357
UNIPROTKB|Q6L8G0353 ZIP5 "Zinc transporter 5" [Ory 0.907 0.917 0.493 1.3e-77
UNIPROTKB|A3BI11390 ZIP8 "Zinc transporter 8" [Ory 0.535 0.489 0.541 3.6e-76
TAIR|locus:2207140360 ZIP5 "zinc transporter 5 precu 0.913 0.905 0.473 3.2e-72
TAIR|locus:2087705355 ZIP1 "zinc transporter 1 precu 0.899 0.904 0.465 1.4e-71
UNIPROTKB|Q6ZJ91396 ZIP4 "Zinc transporter 4" [Ory 0.515 0.464 0.518 6.8e-71
UNIPROTKB|Q7XLD4364 ZIP3 "Zinc transporter 3" [Ory 0.904 0.887 0.450 2.6e-70
UNIPROTKB|Q75HB1374 IRT1 "Fe(2+) transport protein 0.918 0.877 0.450 1.4e-69
UNIPROTKB|Q6L8G1370 IRT2 "Fe(2+) transport protein 0.873 0.843 0.448 3.6e-66
TAIR|locus:2062576339 ZIP3 "zinc transporter 3 precu 0.442 0.466 0.563 2e-65
TAIR|locus:2174098355 ZIP12 "zinc transporter 12 pre 0.767 0.771 0.482 4.1e-65
UNIPROTKB|Q6L8G0 ZIP5 "Zinc transporter 5" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
 Score = 781 (280.0 bits), Expect = 1.3e-77, P = 1.3e-77
 Identities = 162/328 (49%), Positives = 207/328 (63%)

Query:    27 AASSTCTCDEAEAQEHKTTEALKYKXXXXXXXXXXXXXXXXXPFLVKKVSYLSPDKDVFF 86
             AA++ C C    A   K  +AL+ K                 P L  +   + P+ DVF 
Sbjct:    25 AAAAECDCATDTAGRDKA-QALRLKVIAIFCILAGSTVGAALPSLGGRFPAIQPETDVFL 83

Query:    87 LIKAFAAGVILATGFIHILPDAFESLTSPCLCENPWHKFPFAGFIAMMSSIGTLMMEAYA 146
              +KAFA GVILATG +HILP AFE+L+SPCL   PW +FPFAG +AM+S+IGTL+++  A
Sbjct:    84 SVKAFAGGVILATGLVHILPAAFEALSSPCLVGGPWKRFPFAGMVAMVSAIGTLIVDTVA 143

Query:   147 TGYHKRTELRKAQPFDGDEESDHDHDQQGVHA-GHVHGSSFVP-EPTNSSDLIRNRIISQ 204
             TGY  RT+ ++      DE +D D +    H+ GH HG S +   P    DL+R+R+ISQ
Sbjct:   144 TGYFHRTDAKRKAAAVADEPAD-DLEASDEHSHGHAHGMSVMSVAPAGEEDLVRHRVISQ 202

Query:   205 ILEXXXXXXXXXXXXXXGASERASTIKPLVAALSFHQFFEGTGLGGCISQAKFNYTAISI 264
             +LE              GAS+  ST++PLV AL+FHQFFEG GLGGCI QAKF   ++  
Sbjct:   203 VLELGVVVHSLIIGMSLGASDFPSTVRPLVPALTFHQFFEGIGLGGCIVQAKFRVRSVVT 262

Query:   265 MVLFFSLTTPAGIAVGIGISKIYDQSSPTALIVQGLLNSASAGILTYMALVDLLAADFMN 324
             M LFFSLTTPAGI VGIGIS +YD +SPTAL+VQGLL +A+AGIL YMALVD+LA DFM 
Sbjct:   263 MALFFSLTTPAGIVVGIGISSVYDANSPTALVVQGLLEAAAAGILVYMALVDILAEDFMK 322

Query:   325 PKMLSNIRLQIGANFTVLLGASCMCFLA 352
              K+    RLQ+  N  +LLGA  M  +A
Sbjct:   323 TKVQRRGRLQLAMNVALLLGAGLMSMIA 350




GO:0005886 "plasma membrane" evidence=IDA
GO:0006829 "zinc ion transport" evidence=IMP
UNIPROTKB|A3BI11 ZIP8 "Zinc transporter 8" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2207140 ZIP5 "zinc transporter 5 precursor" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2087705 ZIP1 "zinc transporter 1 precursor" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q6ZJ91 ZIP4 "Zinc transporter 4" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q7XLD4 ZIP3 "Zinc transporter 3" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q75HB1 IRT1 "Fe(2+) transport protein 1" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q6L8G1 IRT2 "Fe(2+) transport protein 2" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2062576 ZIP3 "zinc transporter 3 precursor" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174098 ZIP12 "zinc transporter 12 precursor" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6L8G0ZIP5_ORYSJNo assigned EC number0.54190.91870.9291yesno
O81123ZIP1_ARATHNo assigned EC number0.50.92990.9352yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00030117001
SubName- Full=Putative uncharacterized protein (Chromosome chr1 scaffold_5, whole genome shotgun sequence); (348 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query357
TIGR00820324 TIGR00820, zip, ZIP zinc/iron transport family 1e-133
PLN02159337 PLN02159, PLN02159, Fe(2+) transport protein 1e-103
pfam02535314 pfam02535, Zip, ZIP Zinc transporter 6e-71
COG0428266 COG0428, COG0428, Predicted divalent heavy-metal c 7e-05
>gnl|CDD|233141 TIGR00820, zip, ZIP zinc/iron transport family Back     alignment and domain information
 Score =  382 bits (984), Expect = e-133
 Identities = 182/329 (55%), Positives = 233/329 (70%), Gaps = 14/329 (4%)

Query: 32  CTCDEAEAQEHKTTEALKYKLVAIVSILIASAAGVSLPFLVKKVSYLSPDKDVFFLIKAF 91
           C+ ++  +  +K   ALK K+VAI SIL+AS  GV  P + K V  L P+ + FF+ KAF
Sbjct: 1   CSHEDDNSCNNKE-GALKLKIVAIFSILLASVIGVMFPLIGKNVPSLRPEGNFFFVAKAF 59

Query: 92  AAGVILATGFIHILPDAFESLTSPCLCENPWHKFPFAGFIAMMSSIGTLMMEAYATGYHK 151
           AAGVILATGF+H+LP+AFE L+SPCL   PW KFPFAGFIAM+S+I TL+++ +AT Y++
Sbjct: 60  AAGVILATGFMHVLPEAFEMLSSPCLESTPWGKFPFAGFIAMISAILTLLVDLFATSYYE 119

Query: 152 RTELRKAQPFD-----GDEESD--HDHDQQGVHAGHVHGSSFVPEPTNSSDLIRNRIISQ 204
           R   +             EE            +  HVH +S          L+R R+++Q
Sbjct: 120 RKHGKGDHGSKEIKVGDGEEGTAGGTKHGHEYYEDHVHTNS------EVVQLLRQRVVAQ 173

Query: 205 ILELGIVIHSVIIGISLGASERASTIKPLVAALSFHQFFEGTGLGGCISQAKFNYTAISI 264
           +LELGI++HSV+IG+SLGAS+   TIKPL+AALSFHQFFEG GLGGCISQA+F   +++I
Sbjct: 174 VLELGIIVHSVVIGLSLGASQSPDTIKPLIAALSFHQFFEGLGLGGCISQAEFKCKSVTI 233

Query: 265 MVLFFSLTTPAGIAVGIGISKIYDQSSPTALIVQGLLNSASAGILTYMALVDLLAADFMN 324
           M  FF++TTP GIA+G+GIS  YD SSPTALIV+G+LN+ASAGIL YMALVDLLAADFM+
Sbjct: 234 MCTFFAVTTPLGIAIGMGISSSYDDSSPTALIVEGVLNAASAGILIYMALVDLLAADFMH 293

Query: 325 PKMLSNIRLQIGANFTVLLGASCMCFLAK 353
           PKM SN+RLQI A   +LLGA  M  LAK
Sbjct: 294 PKMQSNLRLQIMAYIALLLGAGLMSLLAK 322


The Zinc (Zn2+)-Iron (Fe2+) Permease (ZIP) Family (TC 2.A.5)Members of the ZIP family consist of proteins with eight putative transmembrane spanners. They are derived from animals, plants and yeast. Theycomprise a diverse family, with several paralogues in any one organism (e.g., at least five in Caenorabditis elegans, at least five in Arabidopsis thaliana and two inSaccharomyces cervisiae. The two S. cerevisiae proteins, Zrt1 and Zrt2, both probably transport Zn2+ with high specificity, but Zrt1 transports Zn2+ with ten-fold higher affinitythan Zrt2. Some members of the ZIP family have been shown to transport Zn2+ while others transport Fe2+, and at least one transports a range of metal ions. The energy source fortransport has not been characterized, but these systems probably function as secondary carriers [Transport and binding proteins, Cations and iron carrying compounds]. Length = 324

>gnl|CDD|177818 PLN02159, PLN02159, Fe(2+) transport protein Back     alignment and domain information
>gnl|CDD|217089 pfam02535, Zip, ZIP Zinc transporter Back     alignment and domain information
>gnl|CDD|223505 COG0428, COG0428, Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 357
KOG1558327 consensus Fe2+/Zn2+ regulated transporter [Inorgan 100.0
PLN02159337 Fe(2+) transport protein 100.0
TIGR00820324 zip ZIP zinc/iron transport family. transport has 100.0
PF02535317 Zip: ZIP Zinc transporter; InterPro: IPR003689 The 100.0
PRK04201265 zinc transporter ZupT; Provisional 100.0
COG0428266 Predicted divalent heavy-metal cations transporter 99.93
KOG2693453 consensus Putative zinc transporter [Inorganic ion 99.89
KOG2694361 consensus Putative zinc transporter [Inorganic ion 99.89
KOG3907303 consensus ZIP-like zinc transporter proteins [Intr 99.79
KOG2474406 consensus Zinc transporter and related ZIP domain- 98.64
PRK04201 265 zinc transporter ZupT; Provisional 98.08
PF02535317 Zip: ZIP Zinc transporter; InterPro: IPR003689 The 94.67
COG0428 266 Predicted divalent heavy-metal cations transporter 93.51
PRK11469188 hypothetical protein; Provisional 83.52
TIGR00820324 zip ZIP zinc/iron transport family. transport has 83.21
KOG1558327 consensus Fe2+/Zn2+ regulated transporter [Inorgan 82.31
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
Probab=100.00  E-value=6.9e-65  Score=482.76  Aligned_cols=313  Identities=48%  Similarity=0.747  Sum_probs=266.4

Q ss_pred             cccccccccchhHHHHHHHHHHHHhhhhhhhhhhcccccCCCChhHHHHHHHhhhhHHHHHhHHhccHhhhHhccCCCCC
Q 018362           39 AQEHKTTEALKYKLVAIVSILIASAAGVSLPFLVKKVSYLSPDKDVFFLIKAFAAGVILATGFIHILPDAFESLTSPCLC  118 (357)
Q Consensus        39 ~~~~~~~~~~~~ki~~~~~il~~sllg~~lP~~~~~~~~~~~~~~~l~~l~~fa~GVlLa~aflhLLPea~e~~~~~~~~  118 (357)
                      ..|+|++..+.+|++++++||+.|++++++|++.+|.+..+++++.+++.+||++||+|+|+|+|||||++|.+++.|..
T Consensus         7 ~~~~~~~~~~~lKi~ai~vil~~s~i~~~~Pl~~~~~~~~~~~~~~~~~~kcFa~GViLaT~FlH~Lpd~~E~l~~~~~~   86 (327)
T KOG1558|consen    7 ASCADKMGALLLKIVAIFVILLLSLIGGLLPLFVRRTSALQPESRFLSLVKCFAGGVILATGFLHLLPDAFEALESLCLA   86 (327)
T ss_pred             ccccchhhhhhHHHHHHHHHHHHHHHHhcchHhhccccccCCccchHHHHHHHhccHHHHHHHHHhChhHHHHhhccccc
Confidence            47889999999999999999999999999999998877777889999999999999999999999999999999999998


Q ss_pred             CCCCCCCcHHHHHHHHHHHHHHHHHHHHhhhcccccccc-CCCCCCCCCCCCC-CCC---CCCC-CCCCCCCCCCC--CC
Q 018362          119 ENPWHKFPFAGFIAMMSSIGTLMMEAYATGYHKRTELRK-AQPFDGDEESDHD-HDQ---QGVH-AGHVHGSSFVP--EP  190 (357)
Q Consensus       119 ~~~~~~~p~~~~~~~~G~~l~~lle~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~---~~~~-~~~~h~~~~~~--~~  190 (357)
                      +++|.+|||+++++++|+++++++|++.+.++++++.+. +..+...|+.+.. +..   +... ++|+|.+..+.  +.
T Consensus        87 ~~~~~~fp~~~~i~~~gf~l~l~id~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (327)
T KOG1558|consen   87 DNPWGKFPFAEFIAMLGFFLTLLIDEITTSYVGHGHSHKKRNEVAVSEEGEDLRAVGNGEHGAIHVGHSHGHSEPSTPGV  166 (327)
T ss_pred             CCCCcCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCcCcCcccccccccCCccccCCCCCCCCCCCCccc
Confidence            899999999999999999999999999999886655431 1111111111100 000   0000 23333322211  11


Q ss_pred             CCChhhHHHHHHHHHHHHHHHHHHHHhHHhhheecCccchHHHHHHHHhhhHHHHHhhHHHhhhccCchhHHHHHHHHHH
Q 018362          191 TNSSDLIRNRIISQILELGIVIHSVIIGISLGASERASTIKPLVAALSFHQFFEGTGLGGCISQAKFNYTAISIMVLFFS  270 (357)
Q Consensus       191 ~~~~~~~~~~~~~~~l~~al~iHS~~eGlalGv~~~~~~~~~l~~AI~~Hk~~eg~alg~~l~~~~~s~~~~~~~~~~fs  270 (357)
                      +++.+  .+++.++++++|+++||++||+++|+++|.+++++++.|+.+||.+|||++|.++.+++.++++++.++++||
T Consensus       167 ~~~~~--~~~~~~~iL~lgi~~HSvfeGlalGv~~~~~ti~~L~~al~fHk~fegf~lG~~l~~a~~~~~~~~~~~~~fs  244 (327)
T KOG1558|consen  167 VDDGQ--ASRLRSLILELGLSFHSVFEGLALGVQDSVSTIWTLFLALSFHKLFEGFGLGGCLLQAGFTFKSAVLMALFFS  244 (327)
T ss_pred             cchhh--hhhHHHHHHHHHHHHHHHHHhhhccccCCHHHHHHHHHHHHHHHHHHHhcccHHHhhcccchHHHHHHHHHHH
Confidence            11111  2566689999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhhcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCccccchHHHHHHHHHHHHHhHHHHHH
Q 018362          271 LTTPAGIAVGIGISKIYDQSSPTALIVQGLLNSASAGILTYMALVDLLAADFMNPKMLSNIRLQIGANFTVLLGASCMCF  350 (357)
Q Consensus       271 l~tPlGi~iG~~i~~~~~~~s~~~~~~~gil~alaaGtflYVa~~Ellp~e~~~~~~~~~~~~~~~~~~~~l~G~~~Ma~  350 (357)
                      ++||+|+++|+++++.| ++++++++++++|+|+|+|||+||+++|++|+|+.+++++. .|.++.+++++++|+++|++
T Consensus       245 lttPiGi~iG~~i~~~~-~~s~~~~i~~gvL~alAaGtliY~~lvElla~ef~~~~~~~-~~~~i~~~i~~~~G~alms~  322 (327)
T KOG1558|consen  245 LTTPIGIALGIGISSSY-ENSPGALITSGVLEALAAGTLIYVALVELLAAEFANPKMQS-LKLQILKLIALLLGFALMSL  322 (327)
T ss_pred             HHhHHHHHHHHHhcccc-cCCchhHHHHHHHHHHhhhHhHHHHHHHHhHHHhcCchhhh-HHHHHHHHHHHHHhHHHHHH
Confidence            99999999999999988 88999999999999999999999999999999999988877 88899999999999999999


Q ss_pred             Hhhhh
Q 018362          351 LAKLE  355 (357)
Q Consensus       351 l~~wa  355 (357)
                      +++|+
T Consensus       323 l~~wa  327 (327)
T KOG1558|consen  323 LAIWA  327 (327)
T ss_pred             HHHhC
Confidence            99996



>PLN02159 Fe(2+) transport protein Back     alignment and domain information
>TIGR00820 zip ZIP zinc/iron transport family Back     alignment and domain information
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [] Back     alignment and domain information
>PRK04201 zinc transporter ZupT; Provisional Back     alignment and domain information
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2694 consensus Putative zinc transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG3907 consensus ZIP-like zinc transporter proteins [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2474 consensus Zinc transporter and related ZIP domain-containing proteins [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK04201 zinc transporter ZupT; Provisional Back     alignment and domain information
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [] Back     alignment and domain information
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11469 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00820 zip ZIP zinc/iron transport family Back     alignment and domain information
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00