Citrus Sinensis ID: 018367

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------
MKNNNKRSFAGNQTEMRDKKGFFNSVASGSGTILRPLHDLLHRSSEEAAATPKSKILNNYYIPNYILVSGSEVQRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPR
cccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccEEEEEEcccccccHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHccEEEEEEccccHHHHHHHHHHHccccccccEEEEEccccccccEEcccccccccccHHHHHHHHHHHHHcccEEccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccEEEEEEccccccccccccccccHHccccEEEEEEcccccccccccccc
ccccccccccHHccccccccccHccEEccccEEEEcccccccccccccccccccccccccccccccccccccEEEccccccccEEEEEcccccccHHHHHHHHHHHHHcccHEEEccccccHHHHHHHHHHHHHHHHcccHHHHEcccccEEEEEcccccHHHHHHHHHHccccccccEEEEEccccccHHHHHccccccccccccHHHHHHHHHHcccEEEEccEEEEEEccccccccccccccccccccccHHcccccccccccccccccHHHHHHHEEEcHcHHHHHHHHHHHHHcHHHHccHHHcHHHHHHccccHcHHHHHHHcHcHHcHHHcEEEEEcccccccccccccc
mknnnkrsfagnqtemrdkkgffnsvasgsgtilrplhdllhrsseeaaatpkskilnnyyipnyilvsgsevqrsslipscpvlvfinsksggqlgGKLLLTYRSLLnenqvidlgekapdkVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVsdlklphsppvatvplgtgnnipfsfgwgkknpntdQQAVLSFLEQVKNAKEMQIDSWHILMRmkapkegsfdpiaplelphslhafhrvsqkdklnveghhtfrggfwNYFSMGMDAQVSYAfhserklhpekfqNQLVNQSTYLKLagtqgwflapllhpssRNIAQMAKVKIMKKqgqweelhipr
mknnnkrsfagnqtemrdkkGFFNSVASGSGTILRPLHDLLHRSSEEaaatpkskilnnYYIPNYILVSGSEVQRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKVKIMKkqgqweelhipr
MKNNNKRSFAGNQTEMRDKKGFFNSVASGSGTILRPLHDLLHRSSEEAAATPKSKILNNYYIPNYILVSGSEVQRSSLIPSCPVLVFINsksggqlggklllTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPR
********************************ILR*******************KILNNYYIPNYILVSGSEVQRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKA*****FDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKVKI**************
**NNNKRSFAGNQTEMRDKKGFFNSVASGSGTILRPLH**********************YIPNYILVSGSEVQRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAP**************HSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHI**
********FAGNQTEMRDKKGFFNSVASGSGTILRPLHDLLHRSSEEAAATPKSKILNNYYIPNYILVSGSEVQRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPR
*******SFA*NQTEMRDKKGFFNSVASGSGTILRPLH***************************ILVSGSEVQRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGSFDPIAPLELPHSLHAFHRVSQKD**NVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHI**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooo
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MKNNNKRSFAGNQTEMRDKKGFFNSVASGSGTILRPLHDLLHRSSEEAAATPKSKILNNYYIPNYILVSGSEVQRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query357 2.2.26 [Sep-21-2011]
O75912 1065 Diacylglycerol kinase iot yes no 0.585 0.196 0.329 6e-28
P34125 887 Diacylglycerol kinase A O yes no 0.568 0.228 0.323 7e-27
P23743 735 Diacylglycerol kinase alp no no 0.582 0.282 0.299 1e-25
Q13574 1117 Diacylglycerol kinase zet no no 0.593 0.189 0.320 2e-25
Q03603 795 Probable diacylglycerol k yes no 0.602 0.270 0.316 2e-25
Q80UP3 929 Diacylglycerol kinase zet no no 0.588 0.226 0.329 2e-25
O08560 929 Diacylglycerol kinase zet no no 0.588 0.226 0.329 3e-25
P20192 734 Diacylglycerol kinase alp no no 0.540 0.262 0.298 2e-24
A0JN54 734 Diacylglycerol kinase alp no no 0.540 0.262 0.298 2e-24
Q09103 1457 Eye-specific diacylglycer no no 0.543 0.133 0.319 4e-24
>sp|O75912|DGKI_HUMAN Diacylglycerol kinase iota OS=Homo sapiens GN=DGKI PE=1 SV=1 Back     alignment and function desciption
 Score =  125 bits (313), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 124/261 (47%), Gaps = 52/261 (19%)

Query: 83  PVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVF 142
           P+LVF+N KSGG  G K+L  +   LN  QV DL ++ P   L +LY  +          
Sbjct: 376 PLLVFVNPKSGGNQGTKVLQMFMWYLNPRQVFDLSQEGPKDAL-ELYRKVPN-------- 426

Query: 143 ASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPN 202
                  LR++  GGDGT  W+L ++ +L+L   PPV  +PLGTGN++  +  WG     
Sbjct: 427 -------LRILACGGDGTVGWILSILDELQLSPQPPVGVLPLGTGNDLARTLNWG--GGY 477

Query: 203 TDQQAVLSFLEQVKNAKEMQIDSW--HILMRMKAPKEGSFDPIAPLELPHSLHAFHRVSQ 260
           TD + V   L QV++   +Q+D W  H+      P E   D +  L              
Sbjct: 478 TD-EPVSKILCQVEDGTVVQLDRWNLHVERNPDLPPEELEDGVCKL-------------- 522

Query: 261 KDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQ 320
              LNV         F NYFS+G DA V+  FH  R+ +PEKF ++  N+  Y       
Sbjct: 523 --PLNV---------FNNYFSLGFDAHVTLEFHESREANPEKFNSRFRNKMFY------A 565

Query: 321 GWFLAPLLHPSSRNIAQMAKV 341
           G   +  L  SSR++++  KV
Sbjct: 566 GAAFSDFLQRSSRDLSKHVKV 586

Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 0EC: 7
>sp|P34125|DGKA_DICDI Diacylglycerol kinase A OS=Dictyostelium discoideum GN=dgkA PE=1 SV=3 Back     alignment and function description
>sp|P23743|DGKA_HUMAN Diacylglycerol kinase alpha OS=Homo sapiens GN=DGKA PE=1 SV=3 Back     alignment and function description
>sp|Q13574|DGKZ_HUMAN Diacylglycerol kinase zeta OS=Homo sapiens GN=DGKZ PE=1 SV=3 Back     alignment and function description
>sp|Q03603|DGK3_CAEEL Probable diacylglycerol kinase 3 OS=Caenorhabditis elegans GN=dgk-3 PE=3 SV=3 Back     alignment and function description
>sp|Q80UP3|DGKZ_MOUSE Diacylglycerol kinase zeta OS=Mus musculus GN=Dgkz PE=1 SV=2 Back     alignment and function description
>sp|O08560|DGKZ_RAT Diacylglycerol kinase zeta OS=Rattus norvegicus GN=Dgkz PE=2 SV=1 Back     alignment and function description
>sp|P20192|DGKA_PIG Diacylglycerol kinase alpha OS=Sus scrofa GN=DGKA PE=1 SV=1 Back     alignment and function description
>sp|A0JN54|DGKA_BOVIN Diacylglycerol kinase alpha OS=Bos taurus GN=DGKA PE=2 SV=1 Back     alignment and function description
>sp|Q09103|DGK2_DROME Eye-specific diacylglycerol kinase OS=Drosophila melanogaster GN=rdgA PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query357
255569621 526 diacylglycerol kinase, alpha, putative [ 0.868 0.589 0.749 1e-140
356517209 483 PREDICTED: diacylglycerol kinase 1-like 0.840 0.621 0.737 1e-133
356545351 485 PREDICTED: diacylglycerol kinase 1-like 0.848 0.624 0.736 1e-133
388507358 484 unknown [Medicago truncatula] 0.859 0.634 0.724 1e-131
350535919 511 calmodulin-binding diacylglycerol kinase 0.848 0.592 0.721 1e-131
10798892 489 diacylglycerol kinase [Solanum lycopersi 0.848 0.619 0.721 1e-131
10798894 489 diacylglycerol kinase variant A [Solanum 0.848 0.619 0.718 1e-131
10798895 511 diacylglycerol kinase variant B [Solanum 0.848 0.592 0.718 1e-131
225447673 485 PREDICTED: diacylglycerol kinase A isofo 0.837 0.616 0.74 1e-130
296084956 500 unnamed protein product [Vitis vinifera] 0.837 0.598 0.74 1e-130
>gi|255569621|ref|XP_002525776.1| diacylglycerol kinase, alpha, putative [Ricinus communis] gi|223534926|gb|EEF36612.1| diacylglycerol kinase, alpha, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 236/315 (74%), Positives = 271/315 (86%), Gaps = 5/315 (1%)

Query: 47  EAAATPKSKILNNYYIPNYILVSGSEVQR-----SSLIPSCPVLVFINSKSGGQLGGKLL 101
           E   + K  ++  +YIP+YILV GSE++          PSCPV+VFINS+SGGQLGG+LL
Sbjct: 31  ENEKSEKGIVMKEFYIPDYILVPGSEIENVYGDDDDHKPSCPVIVFINSRSGGQLGGELL 90

Query: 102 LTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTA 161
           +TYR+LLN+NQVIDLGEKAPDKVLHQ+Y TL+K K  GD  A+EI+KRLR+IVAGGDGTA
Sbjct: 91  VTYRTLLNKNQVIDLGEKAPDKVLHQIYATLQKLKNNGDELATEIQKRLRIIVAGGDGTA 150

Query: 162 SWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEM 221
            WLLGVVSDLKLP  PP+ATVPLGTGNN+PFSFGWGKKNP TD+ AV SFLEQV+ A+EM
Sbjct: 151 GWLLGVVSDLKLPQPPPIATVPLGTGNNLPFSFGWGKKNPGTDRLAVESFLEQVRLAREM 210

Query: 222 QIDSWHILMRMKAPKEGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFS 281
           +IDSWHI+MRMK PKEGS DP+ PLELPHSLHAF+RVS+ D LN+EG+HTFRGGFWNYFS
Sbjct: 211 KIDSWHIIMRMKCPKEGSCDPVPPLELPHSLHAFYRVSESDSLNMEGYHTFRGGFWNYFS 270

Query: 282 MGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKV 341
           MGMDAQVSYAFHSERKLHPEKF+NQLVNQSTYLKL  TQGWF A L HP+SRNIAQ+AKV
Sbjct: 271 MGMDAQVSYAFHSERKLHPEKFKNQLVNQSTYLKLGCTQGWFCASLFHPTSRNIAQLAKV 330

Query: 342 KIMKKQGQWEELHIP 356
           KIMK +GQWE+L IP
Sbjct: 331 KIMKTKGQWEDLIIP 345

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356517209|ref|XP_003527281.1| PREDICTED: diacylglycerol kinase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|356545351|ref|XP_003541107.1| PREDICTED: diacylglycerol kinase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|388507358|gb|AFK41745.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|350535919|ref|NP_001234476.1| calmodulin-binding diacylglycerol kinase [Solanum lycopersicum] gi|10798890|gb|AAG23128.1|AF198258_1 calmodulin-binding diacylglycerol kinase [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|10798892|gb|AAG23129.1|AF198259_1 diacylglycerol kinase [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|10798894|gb|AAG23130.1| diacylglycerol kinase variant A [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|10798895|gb|AAG23131.1| diacylglycerol kinase variant B [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|225447673|ref|XP_002275797.1| PREDICTED: diacylglycerol kinase A isoform 1 [Vitis vinifera] gi|359485753|ref|XP_003633328.1| PREDICTED: diacylglycerol kinase A isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|296084956|emb|CBI28371.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query357
TAIR|locus:2051343 509 DGK5 "diacylglycerol kinase 5" 0.843 0.591 0.671 6.1e-110
TAIR|locus:2123703 466 DGK6 "diacylglycerol kinase 6" 0.831 0.637 0.596 7.6e-96
TAIR|locus:2172575 487 DGK4 "diacylglycerol kinase 4" 0.775 0.568 0.338 9.6e-41
TAIR|locus:2053978 488 DGK3 "diacylglycerol kinase 3" 0.806 0.590 0.345 2e-40
TAIR|locus:2118791 492 DGK7 "diacylglycerol kinase 7" 0.801 0.581 0.332 6.8e-40
UNIPROTKB|H0YJH4202 DGKA "Diacylglycerol kinase al 0.260 0.460 0.336 3.6e-20
DICTYBASE|DDB_G0277223 887 dgkA "diacylglycerol kinase" [ 0.501 0.201 0.290 1.1e-19
UNIPROTKB|E9PFX6 734 DGKI "Diacylglycerol kinase io 0.411 0.200 0.309 5.2e-19
UNIPROTKB|J9P1Q1 757 DGKI "Uncharacterized protein" 0.411 0.194 0.309 7.5e-19
UNIPROTKB|F1N2W5 924 DGKI "Uncharacterized protein" 0.411 0.159 0.309 1.3e-18
TAIR|locus:2051343 DGK5 "diacylglycerol kinase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1086 (387.4 bits), Expect = 6.1e-110, P = 6.1e-110
 Identities = 206/307 (67%), Positives = 240/307 (78%)

Query:    54 SKILNNYYIPNYILVSGSEVQR---SSLIPSCPVLVFINXXXXXXXXXXXXXTYRSLLNE 110
             S  L  +YIP Y+L + +E +    S   P+ PVLVFIN             TYRSLLN 
Sbjct:     8 SDFLKEFYIPTYVLSAETEEEEEEESRPTPASPVLVFINSKSGGQLGGELILTYRSLLNH 67

Query:   111 NQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSD 170
             NQV DL ++ PDKVL ++Y+ LE+ K   D FA +I ++L++IVAGGDGTA WLLGVV D
Sbjct:    68 NQVFDLDQETPDKVLRRIYLNLERLK--DDDFARQIREKLKIIVAGGDGTAGWLLGVVCD 125

Query:   171 LKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILM 230
             LKL H PP+ATVPLGTGNN+PF+FGWGKKNP TD+ AV SFLEQV  AK M+ID+WHILM
Sbjct:   126 LKLSHPPPIATVPLGTGNNLPFAFGWGKKNPGTDRTAVESFLEQVLKAKVMKIDNWHILM 185

Query:   231 RMKAPKEG-SFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVS 289
             RMK PKEG S DP+APLELPHSLHAFHRVS  D+LN EG HTFRGGFWNYFS+GMDAQ+S
Sbjct:   186 RMKTPKEGGSCDPVAPLELPHSLHAFHRVSPTDELNKEGCHTFRGGFWNYFSLGMDAQIS 245

Query:   290 YAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQ 349
             YAFHSERKLHPEKF+NQLVNQSTY+KL  TQGWF A L HP+SRNIAQ+AKVKI  + GQ
Sbjct:   246 YAFHSERKLHPEKFKNQLVNQSTYVKLGCTQGWFCASLFHPASRNIAQLAKVKIATRNGQ 305

Query:   350 WEELHIP 356
             W++LHIP
Sbjct:   306 WQDLHIP 312
GO:0004143 "diacylglycerol kinase activity" evidence=IEA;ISS
GO:0007205 "protein kinase C-activating G-protein coupled receptor signaling pathway" evidence=IEA;ISS
GO:0009723 "response to ethylene stimulus" evidence=RCA
TAIR|locus:2123703 DGK6 "diacylglycerol kinase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172575 DGK4 "diacylglycerol kinase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053978 DGK3 "diacylglycerol kinase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118791 DGK7 "diacylglycerol kinase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|H0YJH4 DGKA "Diacylglycerol kinase alpha" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0277223 dgkA "diacylglycerol kinase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|E9PFX6 DGKI "Diacylglycerol kinase iota" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|J9P1Q1 DGKI "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1N2W5 DGKI "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.1.107LOW CONFIDENCE prediction!
3rd Layer2.7.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00029203001
SubName- Full=Chromosome chr12 scaffold_47, whole genome shotgun sequence; (485 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query357
pfam00781127 pfam00781, DAGK_cat, Diacylglycerol kinase catalyt 3e-25
smart00046124 smart00046, DAGKc, Diacylglycerol kinase catalytic 3e-22
pfam00609157 pfam00609, DAGK_acc, Diacylglycerol kinase accesso 3e-11
COG1597301 COG1597, LCB5, Sphingosine kinase and enzymes rela 1e-08
smart00045160 smart00045, DAGKa, Diacylglycerol kinase accessory 3e-08
>gnl|CDD|216116 pfam00781, DAGK_cat, Diacylglycerol kinase catalytic domain Back     alignment and domain information 
 Score = 98.5 bits (246), Expect = 3e-25
 Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 19/144 (13%)

Query: 83  PVLVFINSKSGGQLGGKLLL--TYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGD 140
             LV +N KSGG  G K  +    R  LNE QV++  E  P          LE  +A GD
Sbjct: 1   KALVIVNPKSGGGRGKKDKVLPKLRKALNEAQVVETEEGGPAV-------ALELARALGD 53

Query: 141 VFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKN 200
                      ++VAGGDGT + +L  ++  +    PP+  +PLGTGN+   + G     
Sbjct: 54  -------FDDLVVVAGGDGTVNEVLNGLAGREDRLKPPLGIIPLGTGNDFARALGIPGDP 106

Query: 201 PNTDQQAVLSFLEQVKNAKEMQID 224
                 A+L  L Q+     + +D
Sbjct: 107 DKA---ALLLILGQILRGDVVVLD 127

Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. The catalytic domain is assumed from the finding of bacterial homologues. YegS is the Escherichia coli protein in this family whose crystal structure reveals an active site in the inter-domain cleft formed by four conserved sequence motifs, revealing a novel metal-binding site. The residues of this site are conserved across the family. Length = 127
>gnl|CDD|214487 smart00046, DAGKc, Diacylglycerol kinase catalytic domain (presumed) Back     alignment and domain information
>gnl|CDD|216019 pfam00609, DAGK_acc, Diacylglycerol kinase accessory domain Back     alignment and domain information
>gnl|CDD|224513 COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only] Back     alignment and domain information
>gnl|CDD|214486 smart00045, DAGKa, Diacylglycerol kinase accessory domain (presumed) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 357
KOG1169 634 consensus Diacylglycerol kinase [Lipid transport a 100.0
KOG0782 1004 consensus Predicted diacylglycerol kinase [Signal 100.0
PRK13059 295 putative lipid kinase; Reviewed 99.98
PRK00861 300 putative lipid kinase; Reviewed 99.98
PRK13055 334 putative lipid kinase; Reviewed 99.97
PRK11914 306 diacylglycerol kinase; Reviewed 99.97
PRK13057 287 putative lipid kinase; Reviewed 99.97
PRK13337 304 putative lipid kinase; Reviewed 99.97
COG1597 301 LCB5 Sphingosine kinase and enzymes related to euk 99.97
TIGR03702293 lip_kinase_YegS lipid kinase YegS. Members of this 99.97
PRK13054 300 lipid kinase; Reviewed 99.97
TIGR00147293 lipid kinase, YegS/Rv2252/BmrU family. The E. coli 99.96
PRK12361 547 hypothetical protein; Provisional 99.96
PLN02958 481 diacylglycerol kinase/D-erythro-sphingosine kinase 99.95
KOG1170 1099 consensus Diacylglycerol kinase [Lipid transport a 99.94
PLN02204 601 diacylglycerol kinase 99.94
PF00781130 DAGK_cat: Diacylglycerol kinase catalytic domain; 99.91
smart00046124 DAGKc Diacylglycerol kinase catalytic domain (pres 99.89
KOG1116 579 consensus Sphingosine kinase, involved in sphingol 99.78
PF00609161 DAGK_acc: Diacylglycerol kinase accessory domain; 99.6
KOG1115 516 consensus Ceramide kinase [Lipid transport and met 99.32
KOG4435 535 consensus Predicted lipid kinase [Lipid transport 99.01
smart00045160 DAGKa Diacylglycerol kinase accessory domain (pres 98.75
PRK03708277 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 98.41
PRK02645305 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 98.27
PRK03378292 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 97.86
COG3199355 Predicted inorganic polyphosphate/ATP-NAD kinase [ 97.64
PRK01231295 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 97.38
PF01513285 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Me 97.16
PRK03372306 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 97.13
PRK14077287 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 97.02
PRK02155291 ppnK NAD(+)/NADH kinase family protein; Provisiona 96.85
PRK04539296 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 96.76
PRK02649305 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 96.65
PRK01911292 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 96.61
PRK03501264 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 96.57
PLN02935508 Bifunctional NADH kinase/NAD(+) kinase 96.16
PRK14075256 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 96.03
PRK14076569 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 95.5
PRK04885265 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 95.35
PRK00561259 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 95.27
PRK01185271 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 94.75
PLN02727986 NAD kinase 94.44
PLN02929301 NADH kinase 93.47
PRK02231272 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 93.29
PRK04761246 ppnK inorganic polyphosphate/ATP-NAD kinase; Revie 90.96
PF10254 414 Pacs-1: PACS-1 cytosolic sorting protein; InterPro 89.83
cd08180332 PDD 1,3-propanediol dehydrogenase (PPD) catalyzes 88.48
COG0061281 nadF NAD kinase [Coenzyme metabolism] 88.45
cd08197355 DOIS 2-deoxy-scyllo-inosose synthase (DOIS) cataly 86.6
PRK09860383 putative alcohol dehydrogenase; Provisional 85.22
TIGR03405355 Phn_Fe-ADH phosphonate metabolism-associated iron- 84.72
cd08176377 LPO Lactadehyde:propanediol oxidoreductase (LPO) c 83.23
cd08179375 NADPH_BDH NADPH-dependent butanol dehydrogenase in 82.97
cd08169344 DHQ-like Dehydroquinate synthase-like which includ 82.56
cd08172347 GlyDH-like1 Glycerol dehydrogenases-like. Glycerol 80.94
cd08195345 DHQS Dehydroquinate synthase (DHQS) catalyzes the 80.5
>KOG1169 consensus Diacylglycerol kinase [Lipid transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=5.7e-51  Score=418.27  Aligned_cols=260  Identities=33%  Similarity=0.595  Sum_probs=211.7

Q ss_pred             CccccccccccccCeEEecCCccc--------------------------cccCCCCCcEEEEEcCCCCCCChhhHHHHH
Q 018367           51 TPKSKILNNYYIPNYILVSGSEVQ--------------------------RSSLIPSCPVLVFINSKSGGQLGGKLLLTY  104 (357)
Q Consensus        51 ~~~~~~~~~~~~p~~~~~~~~~~~--------------------------~~~~~~~~~vlvIvNP~SG~~~g~~~~~~~  104 (357)
                      .++.+.+++.++|++++.|.....                          ...+.+.+|++|||||+||+++|..+++++
T Consensus       215 ~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PLlVfvNpKSGg~~G~~ll~~f  294 (634)
T KOG1169|consen  215 ECDLGELKDHILPPSTLRPARTARVASDHSGLPGEKSEEVTDAKKMQQLLVTDPPDWRPLLVFVNPKSGGQQGERLLRRF  294 (634)
T ss_pred             hccChhhhhccCCceeeecccccccccccccccccccccccccccccccccCCCCCCcceEEEEecCCcccccHHHHHHH
Confidence            357889999999999998874431                          244567799999999999999999999999


Q ss_pred             HHhhccCcEEEeeccC-hhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHHhCCCC---CCCCEE
Q 018367          105 RSLLNENQVIDLGEKA-PDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLP---HSPPVA  180 (357)
Q Consensus       105 ~~~L~~~~V~~l~~~~-p~~~~~~~~~~l~~l~~~~~~lA~~~~~~~~VVv~GGDGTVneVln~L~~~~~~---~~~plg  180 (357)
                      +.+|++.|||+++... |..++. ++..+               ...+|+||||||||.||++.+.+++.+   +.||+|
T Consensus       295 ~~lLnp~QVfdl~~~~~p~~gL~-l~~~~---------------~~~riLVcGGDGTvGWVL~~i~~~n~~~~~~~PpVA  358 (634)
T KOG1169|consen  295 RYLLNPVQVFDLLKRGGPRPGLT-LFRDV---------------PDFRILVCGGDGTVGWVLGCIDKLNKQNAIPPPPVA  358 (634)
T ss_pred             HHhcChhhEEecccCCCCchhHH-HHHhC---------------CcceEEEecCCCcchhhhhhHHHhhccccCCCCCeE
Confidence            9999999999999864 777664 22221               345999999999999999999876432   589999


Q ss_pred             EEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeeeEEEEEEeeeecCCCCCCCCCCCCCCCCccccccccccc
Q 018367          181 TVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGSFDPIAPLELPHSLHAFHRVSQ  260 (357)
Q Consensus       181 IIP~GTGNDfARsLG~~~~~~~~~~~~~~~~l~~I~~~~~~~iD~~~v~~~~~~~~~g~~~~~~~~~~p~s~~~~~~~~~  260 (357)
                      |+|+||||||||.|+||.++++.+.. +..+|+.|..+.+.++|+|+|.+.+....     ..     |.+++.-     
T Consensus       359 ilPLGTGNDLsR~l~WGgg~~g~~~~-~~~iL~~i~~a~v~~lDrW~v~v~~~~~~-----~~-----~~~~~~~-----  422 (634)
T KOG1169|consen  359 ILPLGTGNDLSRVLRWGGGYPGEDRN-LIKILKDIEEAPVTKLDRWKVLVEPQSGE-----LV-----QYSLKPP-----  422 (634)
T ss_pred             EEecCCCCchHhhcCCCCCCCcchhh-HHHHHHhhhhccceecceeeEEeeccccc-----cc-----cccccCC-----
Confidence            99999999999999999999998655 99999999999999999999998864321     00     1111100     


Q ss_pred             cccccccCcceeccceeeeeccchhHHHHHHHHhhhhcCcccccccccchHHHHHHhhhccccccccCCCcccCccceEE
Q 018367          261 KDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAK  340 (357)
Q Consensus       261 ~~~~~~~~~~~~~~~F~NyfsIG~DA~Va~~f~~~R~~~p~~f~~rl~nkl~Y~~~g~k~~~~~~~l~~~~~~~~~~~~~  340 (357)
                       .    .+.+.+...|+||||||+||+|+++||.+|+++|++|++|+.||++|+.+|++. ||++++.     +++-.++
T Consensus       423 -~----~~~~~~~~imnNYFSIGvDA~Ia~~FH~~Re~~PekF~Sr~~NKl~Yf~~G~q~-~f~~~ck-----~~~~~i~  491 (634)
T KOG1169|consen  423 -E----KGDPVPYGIMNNYFSIGVDAQIAYGFHNMREKNPEKFNSRMKNKLWYFEFGTQE-TFAARCK-----NLHLHIK  491 (634)
T ss_pred             -C----cCCCCCeeeEeeeeeecccHHHHHHHHHHhhhChHhhcchhhceeeeeeecchh-hHHHhhc-----CCccceE
Confidence             0    011223358999999999999999999999999999999999999999999955 8888764     5555677


Q ss_pred             EEEeccCCCeEEccCC
Q 018367          341 VKIMKKQGQWEELHIP  356 (357)
Q Consensus       341 v~vd~~~~~~~~~~~~  356 (357)
                      +.+++   +|+|+++|
T Consensus       492 i~~~~---d~~dl~~p  504 (634)
T KOG1169|consen  492 IELDG---DGEDLELP  504 (634)
T ss_pred             EEEcc---cceEccCC
Confidence            77777   59999998

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms] Back     alignment and domain information
>PRK13059 putative lipid kinase; Reviewed Back     alignment and domain information
>PRK00861 putative lipid kinase; Reviewed Back     alignment and domain information
>PRK13055 putative lipid kinase; Reviewed Back     alignment and domain information
>PRK11914 diacylglycerol kinase; Reviewed Back     alignment and domain information
>PRK13057 putative lipid kinase; Reviewed Back     alignment and domain information
>PRK13337 putative lipid kinase; Reviewed Back     alignment and domain information
>COG1597 LCB5 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only] Back     alignment and domain information
>TIGR03702 lip_kinase_YegS lipid kinase YegS Back     alignment and domain information
>PRK13054 lipid kinase; Reviewed Back     alignment and domain information
>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family Back     alignment and domain information
>PRK12361 hypothetical protein; Provisional Back     alignment and domain information
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase Back     alignment and domain information
>KOG1170 consensus Diacylglycerol kinase [Lipid transport and metabolism] Back     alignment and domain information
>PLN02204 diacylglycerol kinase Back     alignment and domain information
>PF00781 DAGK_cat: Diacylglycerol kinase catalytic domain; InterPro: IPR001206 The DAG-kinase catalytic domain or DAGKc domain is present in mammalian lipid kinases, such as diacylglycerol (DAG), ceramide and sphingosine kinases, as well as in related bacterial proteins [, ] Back     alignment and domain information
>smart00046 DAGKc Diacylglycerol kinase catalytic domain (presumed) Back     alignment and domain information
>KOG1116 consensus Sphingosine kinase, involved in sphingolipid metabolism [Lipid transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>PF00609 DAGK_acc: Diacylglycerol kinase accessory domain; InterPro: IPR000756 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases Back     alignment and domain information
>KOG1115 consensus Ceramide kinase [Lipid transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG4435 consensus Predicted lipid kinase [Lipid transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>smart00045 DAGKa Diacylglycerol kinase accessory domain (presumed) Back     alignment and domain information
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>COG3199 Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only] Back     alignment and domain information
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2 Back     alignment and domain information
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional Back     alignment and domain information
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase Back     alignment and domain information
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PLN02727 NAD kinase Back     alignment and domain information
>PLN02929 NADH kinase Back     alignment and domain information
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed Back     alignment and domain information
>PF10254 Pacs-1: PACS-1 cytosolic sorting protein; InterPro: IPR019381 PACS-1 is a cytosolic sorting protein that directs the localisation of membrane proteins in the trans-Golgi network (TGN)/endosomal system Back     alignment and domain information
>cd08180 PDD 1,3-propanediol dehydrogenase (PPD) catalyzes the reduction of 3-hydroxypropionaldehyde (3-HPA) to 1,3-propanediol in glycerol metabolism Back     alignment and domain information
>COG0061 nadF NAD kinase [Coenzyme metabolism] Back     alignment and domain information
>cd08197 DOIS 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics Back     alignment and domain information
>PRK09860 putative alcohol dehydrogenase; Provisional Back     alignment and domain information
>TIGR03405 Phn_Fe-ADH phosphonate metabolism-associated iron-containing alcohol dehydrogenase Back     alignment and domain information
>cd08176 LPO Lactadehyde:propanediol oxidoreductase (LPO) catalyzes the interconversion between L-lactaldehyde and L-1,2-propanediol in Escherichia coli and other enterobacteria Back     alignment and domain information
>cd08179 NADPH_BDH NADPH-dependent butanol dehydrogenase involved in the butanol and ethanol formation pathway in bacteria Back     alignment and domain information
>cd08169 DHQ-like Dehydroquinate synthase-like which includes dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase Back     alignment and domain information
>cd08172 GlyDH-like1 Glycerol dehydrogenases-like Back     alignment and domain information
>cd08195 DHQS Dehydroquinate synthase (DHQS) catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query357
3s40_A304 Diacylglycerol kinase; structural genomics, the ce 5e-09
2qv7_A 337 Diacylglycerol kinase DGKB; alpha-beta domain 1, b 7e-08
2bon_A332 Lipid kinase; DAG kinase, transferase; 1.90A {Esch 4e-06
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A Length = 304 Back     alignment and structure
 Score = 55.8 bits (135), Expect = 5e-09
 Identities = 42/218 (19%), Positives = 68/218 (31%), Gaps = 73/218 (33%)

Query: 84  VLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDV-- 141
           VL+ +N K+G       L      L      DL           +  T    K  GD   
Sbjct: 11  VLLIVNPKAGQGDLHTNLTKIVPPLAAAF-PDL----------HILHT----KEQGDATK 55

Query: 142 FASEIEKRLRLIVA-GGDGTASWLLGVVSDL-KLPHSPPVATVPLGTGNNIPFSFGWGKK 199
           +  E   ++ LI+  GGDGT        + L  L   P +A +P GT N+   + G    
Sbjct: 56  YCQEFASKVDLIIVFGGDGTVF---ECTNGLAPLEIRPTLAIIPGGTCNDFSRTLGV--- 109

Query: 200 NPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGSFDPIAPLELPHSLHAFHRVS 259
            P    +A     + +       +D    + +                            
Sbjct: 110 -PQNIAEA----AKLITKEHVKPVD----VAK---------------------------- 132

Query: 260 QKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERK 297
                   G H     F N++ +G+ ++VS    +E K
Sbjct: 133 ------ANGQH-----FLNFWGIGLVSEVSNNIDAEEK 159
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A Length = 337 Back     alignment and structure
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A Length = 332 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query357
3s40_A 304 Diacylglycerol kinase; structural genomics, the ce 100.0
2qv7_A 337 Diacylglycerol kinase DGKB; alpha-beta domain 1, b 99.96
2bon_A 332 Lipid kinase; DAG kinase, transferase; 1.90A {Esch 99.96
2an1_A292 Putative kinase; structural genomics, PSI, protein 99.03
1yt5_A258 Inorganic polyphosphate/ATP-NAD kinase; domain 1: 98.84
2i2c_A272 Probable inorganic polyphosphate/ATP-NAD kinase 1; 98.72
1u0t_A307 Inorganic polyphosphate/ATP-NAD kinase; alpha-beta 98.7
3afo_A388 NADH kinase POS5; alpha/beta+BETA sandwich, ATP-bi 98.16
1z0s_A278 Probable inorganic polyphosphate/ATP-NAD kinase; A 94.94
3pfn_A365 NAD kinase; structural genomics consortium, SNP, S 92.79
3hl0_A353 Maleylacetate reductase; structur genomics, PSI-2, 88.19
3jzd_A358 Iron-containing alcohol dehydrogenase; YP_298327.1 85.55
3uhj_A387 Probable glycerol dehydrogenase; structural genomi 83.33
1o2d_A371 Alcohol dehydrogenase, iron-containing; TM0920, st 80.31
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A Back     alignment and structure
Probab=100.00  E-value=8.1e-33  Score=266.16  Aligned_cols=184  Identities=18%  Similarity=0.186  Sum_probs=129.1

Q ss_pred             CCCCCcEEEEEcCCCCCCChhhHHHHHHHhhccCcE-EEee-ccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEE
Q 018367           78 LIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLG-EKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVA  155 (357)
Q Consensus        78 ~~~~~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~~V-~~l~-~~~p~~~~~~~~~~l~~l~~~~~~lA~~~~~~~~VVv~  155 (357)
                      ..++++++||+||+||++++.+.+..+++.|....+ +.+. .+.++++.+ +.+.+             ..+.+.||++
T Consensus         5 ~~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~~a~~-~~~~~-------------~~~~d~vv~~   70 (304)
T 3s40_A            5 KTKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDATK-YCQEF-------------ASKVDLIIVF   70 (304)
T ss_dssp             CCSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCSTTHHHH-HHHHH-------------TTTCSEEEEE
T ss_pred             cCCCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCcchHHH-HHHHh-------------hcCCCEEEEE
Confidence            345789999999999999999999999998875432 2222 235666543 22221             1245689999


Q ss_pred             cCchHHHHHHHHHHhCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeeeEEEEEEeeeecCC
Q 018367          156 GGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAP  235 (357)
Q Consensus       156 GGDGTVneVln~L~~~~~~~~~plgIIP~GTGNDfARsLG~~~~~~~~~~~~~~~~l~~I~~~~~~~iD~~~v~~~~~~~  235 (357)
                      |||||||||+|++...  ...+|||+||+||||||||+||+|.        ++.++++.|.+++.+++|+|+++      
T Consensus        71 GGDGTl~~v~~~l~~~--~~~~~l~iiP~Gt~N~~ar~lg~~~--------~~~~a~~~i~~g~~~~iDlg~v~------  134 (304)
T 3s40_A           71 GGDGTVFECTNGLAPL--EIRPTLAIIPGGTCNDFSRTLGVPQ--------NIAEAAKLITKEHVKPVDVAKAN------  134 (304)
T ss_dssp             ECHHHHHHHHHHHTTC--SSCCEEEEEECSSCCHHHHHTTCCS--------SHHHHHHHHTTCCEEEEEEEEET------
T ss_pred             ccchHHHHHHHHHhhC--CCCCcEEEecCCcHHHHHHHcCCCc--------cHHHHHHHHHhCCeEEEEEEEEC------
Confidence            9999999999999863  3578999999999999999999997        68889999999999999999884      


Q ss_pred             CCCCCCCCCCCCCCccccccccccccccccccCcceeccceeeeeccchhHHHHHHHHhhhhcCcccccccccchHHHHH
Q 018367          236 KEGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLK  315 (357)
Q Consensus       236 ~~g~~~~~~~~~~p~s~~~~~~~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~Va~~f~~~R~~~p~~f~~rl~nkl~Y~~  315 (357)
                                                +           ++|+|++|+||||+|++.++..++        +..|++.|++
T Consensus       135 --------------------------~-----------~~F~~~~~~G~da~v~~~~~~~~k--------~~~G~~~Y~~  169 (304)
T 3s40_A          135 --------------------------G-----------QHFLNFWGIGLVSEVSNNIDAEEK--------AKLGKIGYYL  169 (304)
T ss_dssp             --------------------------T-----------EEESSEEEEC--------------------------CHHHHT
T ss_pred             --------------------------C-----------EEEEEEEeehHHHHHHHhcCHHHh--------hcCCchHHHH
Confidence                                      0           479999999999999999876543        4679999999


Q ss_pred             HhhhccccccccCCCcccCccceEEEEEecc
Q 018367          316 LAGTQGWFLAPLLHPSSRNIAQMAKVKIMKK  346 (357)
Q Consensus       316 ~g~k~~~~~~~l~~~~~~~~~~~~~v~vd~~  346 (357)
                      .++++      ++++  +  ...++|++|++
T Consensus       170 ~~l~~------l~~~--~--~~~~~i~~dg~  190 (304)
T 3s40_A          170 STIRT------VKNA--E--TFPVKITYDGQ  190 (304)
T ss_dssp             TTC--------------C--CEEEEEEETTE
T ss_pred             HHHHH------Hhhc--C--CceEEEEECCE
Confidence            99998      7642  2  26789999986
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A Back     alignment and structure
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A Back     alignment and structure
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium} Back     alignment and structure
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima} Back     alignment and structure
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A* Back     alignment and structure
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A Back     alignment and structure
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A* Back     alignment and structure
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens} Back     alignment and structure
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str} Back     alignment and structure
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha} Back     alignment and structure
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti} Back     alignment and structure
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 357
d2qv7a1312 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Sta 2e-07
d2bona1295 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia 2e-06
>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]} Length = 312 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: NAD kinase/diacylglycerol kinase-like
superfamily: NAD kinase/diacylglycerol kinase-like
family: Diacylglycerol kinase-like
domain: Diacylglycerol kinase DgkB
species: Staphylococcus aureus [TaxId: 1280]

 Score = 49.6 bits (117), Expect = 2e-07
 Identities = 28/144 (19%), Positives = 50/144 (34%), Gaps = 21/144 (14%)

Query: 84  VLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFA 143
             +  N  SG +   + L      L +                  Y T +   A  +   
Sbjct: 5   ARIIYNPTSGKEQFKRELPDALIKLEKAGYE-----------TSAYATEKIGDATLEAER 53

Query: 144 SEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNT 203
           +  E    LI AGGDGT + ++  +   + P+ P +  +P+GT N+   +       PN 
Sbjct: 54  AMHENYDVLIAAGGDGTLNEVVNGI--AEKPNRPKLGVIPMGTVNDFGRALHI----PND 107

Query: 204 DQQAVLSFLEQVKNAKEMQIDSWH 227
              A    L+ +      ++D   
Sbjct: 108 IMGA----LDVIIEGHSTKVDIGK 127
>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]} Length = 295 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query357
d2qv7a1 312 Diacylglycerol kinase DgkB {Staphylococcus aureus 99.97
d2bona1 295 Lipid kinase YegS {Escherichia coli [TaxId: 562]} 99.97
d1u0ta_302 Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycob 96.19
d1z0sa1249 Inorganic polyphosphate/ATP-NAD kinase PpnK {Archa 93.92
d1o2da_359 Alcohol dehydrogenase TM0920 {Thermotoga maritima 91.12
d1vlja_398 NADH-dependent butanol dehydrogenase A (TM0820) {T 85.76
d1jq5a_366 Glycerol dehydrogenase {Bacillus stearothermophilu 81.68
>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: NAD kinase/diacylglycerol kinase-like
superfamily: NAD kinase/diacylglycerol kinase-like
family: Diacylglycerol kinase-like
domain: Diacylglycerol kinase DgkB
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.97  E-value=4.8e-32  Score=257.66  Aligned_cols=184  Identities=19%  Similarity=0.182  Sum_probs=135.3

Q ss_pred             CcEEEEEcCCCCCCChhhHHHHHHHhhccCcE-EEeec-cChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 018367           82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG  159 (357)
Q Consensus        82 ~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~~V-~~l~~-~~p~~~~~~~~~~l~~l~~~~~~lA~~~~~~~~VVv~GGDG  159 (357)
                      ++++||+||+||++++.+.+..+.+.|..... +++.. +.++++.+.+...+             ..+.+.|||+||||
T Consensus         3 kr~~vi~NP~SG~~~~~~~~~~~~~~l~~~~~~~~~~~t~~~~~~~~~~~~~~-------------~~~~d~ivv~GGDG   69 (312)
T d2qv7a1           3 KRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGDATLEAERAM-------------HENYDVLIAAGGDG   69 (312)
T ss_dssp             EEEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCSTTHHHHHHHHHT-------------TTTCSEEEEEECHH
T ss_pred             ceEEEEECcCCCCCcHHHHHHHHHHHHHHCCCeEEEEEcCCccHHHHHHHHHH-------------HcCCCEEEEEcCCc
Confidence            68999999999999999999888888764332 22222 35666543221111             12457899999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeeeEEEEEEeeeecCCCCCC
Q 018367          160 TASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGS  239 (357)
Q Consensus       160 TVneVln~L~~~~~~~~~plgIIP~GTGNDfARsLG~~~~~~~~~~~~~~~~l~~I~~~~~~~iD~~~v~~~~~~~~~g~  239 (357)
                      |||||+++|++.  +..+||||||+||||||||+|||+.        +++++++.+.++.++++|+|+++.         
T Consensus        70 Tv~~v~~~l~~~--~~~~~l~iiP~GTgN~~ar~l~~~~--------~~~~al~~~~~~~~~~id~~~v~~---------  130 (312)
T d2qv7a1          70 TLNEVVNGIAEK--PNRPKLGVIPMGTVNDFGRALHIPN--------DIMGALDVIIEGHSTKVDIGKMNN---------  130 (312)
T ss_dssp             HHHHHHHHHTTC--SSCCEEEEEECSSCCHHHHHTTCCS--------SHHHHHHHHHHTCEEEEEEEEETT---------
T ss_pred             HHHHHHHHHHhh--ccccceEEeecCCCCcchhhccccc--------hHHHHHHhhhcCCcEEecccccCc---------
Confidence            999999999764  3568999999999999999999987        688999999999999999998841         


Q ss_pred             CCCCCCCCCCccccccccccccccccccCcceeccceeeeeccchhHHHHHHHHhhhhcCcccccccccchHHHHHHhhh
Q 018367          240 FDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGT  319 (357)
Q Consensus       240 ~~~~~~~~~p~s~~~~~~~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~Va~~f~~~R~~~p~~f~~rl~nkl~Y~~~g~k  319 (357)
                                                        ++|.|++|+|+||+++..+++.++        ++.+++.|++.+++
T Consensus       131 ----------------------------------~~f~~~~~~G~~a~~~~~~~~~~~--------~~~~~~~y~~~~~~  168 (312)
T d2qv7a1         131 ----------------------------------RYFINLAAGGQLTQVSYETPSKLK--------SIVGPFAYYIKGFE  168 (312)
T ss_dssp             ----------------------------------EEESSEEEEECBCC---------------------CGGGSCCCTTT
T ss_pred             ----------------------------------cceeeeeeeehhhHHHHHHHHhhh--------ccccchHHHHHHHH
Confidence                                              379999999999999988877543        46788999999888


Q ss_pred             ccccccccCCCcccCccceEEEEEeccCCCeE
Q 018367          320 QGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWE  351 (357)
Q Consensus       320 ~~~~~~~l~~~~~~~~~~~~~v~vd~~~~~~~  351 (357)
                      .      +++++    ...+++++|++  .|+
T Consensus       169 ~------l~~~~----~~~~~i~~dg~--~~~  188 (312)
T d2qv7a1         169 M------LPQMK----AVDLRIEYDGN--VFQ  188 (312)
T ss_dssp             T------GGGBC----CEEEEEEETTE--EEE
T ss_pred             H------hhccC----ceEEEeecCCc--cee
Confidence            7      65322    25788999986  554
>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1z0sa1 e.52.1.1 (A:1-249) Inorganic polyphosphate/ATP-NAD kinase PpnK {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1o2da_ e.22.1.2 (A:) Alcohol dehydrogenase TM0920 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vlja_ e.22.1.2 (A:) NADH-dependent butanol dehydrogenase A (TM0820) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1jq5a_ e.22.1.2 (A:) Glycerol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure