Citrus Sinensis ID: 018372

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------
Protein Sequence
MMASRVLSRATRCVGRRALLLVPTSGKQHSPALSNQFHSLVFESPNKVSLFHQTTLNSSIFQRFGFSSASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNGDAKASDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVENDRAENNDQA
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccccccccccHHcccccccccccccEEEEEEccEEcccccccccEEEEEcccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHcccccccccEEEEccccccccccccEEEccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHcccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccccccccHcHEEEEccccccccccEEEEEEccEEEcccEEEEEEEEEEcccccccccHcccc
Coil and Loop (DISEMBL)
MMASRVLSRATRCVGRRAlllvptsgkqhspalsnqFHSLVfespnkvslfHQTTLNSsifqrfgfssaspepnekeqgsapdnngaespkpnrdakdsvdnngaeapkpngdakasdegmeatdrtkesgfdskpqstvsqsnkrrrrvskqtafsdsdsdseseiELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLgrassvvkenflkidpsndtagaVPLLKSLLEGVEMTEKQLGEVFKKFgvekfdpinepfdphrhnamfqlpdnskppgtvaHVLKSGYTLYErvirpaevgVTQAVEndraenndqa
Flexible Loop (DISEMBL)
mmasrvlsratrcvgrRALLLVPTSGKQHSPALSNQFHSLVFESPNKVSLFHQTTLNSSIFQRFGFSSASpepnekeqgsapdnngaespkpnrdakdsvdnngaeapkpngdakasdegMEATdrtkesgfdskpqstvsqsnkrrrrvskqtafsdsdsdseseielsrdDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKEnflkidpsndtagAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVgvtqavendraenndqa
Low Complexity Region (SEG)
MMASRVLSRATRCVGRRALLLVPTSGKQHSPALSNQFHSLVFESPNKVSLFHQTTLNSSIFQRFGFSSASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNGDAKASDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFsdsdsdseseielsrddlvkllkereellmakNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVENDRAENNDQA
Disordered region (IsUnstruct)
**********TRCVGRRALLLVP*************FHSLVFESPNKVSLFHQTTLNSSIFQRF*************************************************************************************************************************************************************KFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPI***********************TVAHVLKSGYTLYERVIRPAEVGVT**************
Disordered Region (DISOPRED)
********RATR***********************************VSLFHQTTLNSSIFQ****************************************************************************************************************************AKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKE**************VPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVG****************
Disordered Region (DISEMBL)
*********ATRCVGRRALLLVPTSGKQHSPALSNQFHSLVFESPNKVSLFHQTTLNSSIFQRFGFS********************************VDNNGA***************************************************************LSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVEN*********
Disordered Region (DISPRO)
*M***V*****RCVGRRALLLVPTSGKQHSPALSNQFHSLVFESPNKVSLFHQTTLNSSIFQRFGF****************************************************************************************************IELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQA************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMASRVLSRATRCVGRRALLLVPTSGKQHSPALSNQFHSLVFESPNKVSLFHQTTLNSSIFQRFGFSSASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNGDAKASDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDDxxxxxxxxxxxxxxxxxxxxxxxxxVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVENDRAENNDQA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	357	2.2.26 [Sep-21-2011]
Q3SW78	197	Protein GrpE OS=Nitrobact	yes	no	0.417	0.756	0.445	8e-34
Q6NCY6	207	Protein GrpE OS=Rhodopseu	yes	no	0.411	0.710	0.438	4e-32
B3Q970	207	Protein GrpE OS=Rhodopseu	yes	no	0.411	0.710	0.438	6e-32
A4YJR1	206	Protein GrpE OS=Bradyrhiz	yes	no	0.392	0.679	0.466	9e-32
Q07US4	207	Protein GrpE OS=Rhodopseu	yes	no	0.417	0.719	0.446	1e-31
B6JCI1	200	Protein GrpE OS=Oligotrop	yes	no	0.411	0.735	0.458	1e-31
P38523	228	GrpE protein homolog, mit	yes	no	0.560	0.877	0.366	1e-30
Q79V15	201	Protein GrpE OS=Bradyrhiz	yes	no	0.408	0.726	0.461	1e-30
Q13E58	206	Protein GrpE OS=Rhodopseu	yes	no	0.406	0.703	0.437	3e-30
P48604	213	GrpE protein homolog, mit	yes	no	0.439	0.737	0.435	3e-30

>sp|Q3SW78|GRPE_NITWN Protein GrpE OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=grpE PE=3 SV=1

 Score =  144 bits (364), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 70/157 (44%), Positives = 106/157 (67%), Gaps = 8/157 (5%)

Query: 182 EELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGR 241
           ++ L A N+++ + +D+ LR+ AEMEN++ RT RE  +++ + I  FA+ +L++ADNL R
Sbjct: 34  DDALDALNKQLAEAKDRTLRTLAEMENLRKRTAREVSDARTYGISGFARDVLEIADNLQR 93

Query: 242 ASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDP 301
           A   V        P++  A   P LK+L+EGVE+TE+ L    +K GV+KFDP  E FDP
Sbjct: 94  ALDAV--------PADARAAPDPGLKALIEGVELTERSLHNALEKHGVKKFDPAGEKFDP 145

Query: 302 HRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPA 338
           + H AM+++PD S P GTVA V+++GY + ERV+RPA
Sbjct: 146 NVHQAMYEVPDPSIPVGTVAQVIQAGYMIGERVLRPA 182

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.
Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) (taxid: 323098)

>sp|Q6NCY6|GRPE_RHOPA Protein GrpE OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) GN=grpE PE=3 SV=2

 Score =  139 bits (349), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 68/155 (43%), Positives = 104/155 (67%), Gaps = 8/155 (5%)

Query: 191 EMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENF 250
           E    +DK+LR+ AEMEN++ RT +E  +++ + + +FA+ +LD+ADNL RA   V    
Sbjct: 44  EAADARDKMLRTLAEMENLRKRTQKEVADARTYGVTSFARDVLDIADNLQRALDAV---- 99

Query: 251 LKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQL 310
               P++  A A P LK+L+EGVE+TE+ L    +K GV+KFDP  + FDP+   AM+++
Sbjct: 100 ----PADARANAEPGLKALIEGVELTERSLLNALEKNGVKKFDPKGQKFDPNFQQAMYEV 155

Query: 311 PDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQA 345
           PD S P GTV  V+++G+T+ +RV+RPA VGV + 
Sbjct: 156 PDPSVPAGTVVQVVQAGFTIGDRVLRPALVGVAKG 190

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.

Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) (taxid: 258594)

>sp|B3Q970|GRPE_RHOPT Protein GrpE OS=Rhodopseudomonas palustris (strain TIE-1) GN=grpE PE=3 SV=1

 Score =  138 bits (347), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 68/155 (43%), Positives = 103/155 (66%), Gaps = 8/155 (5%)

Query: 191 EMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENF 250
           E    +DK+LR+ AEMEN++ RT +E  +++ + + +FA+ +LD+ADNL RA   V    
Sbjct: 44  EAADARDKMLRTLAEMENLRKRTQKEVADARTYGVTSFARDVLDIADNLQRALDAV---- 99

Query: 251 LKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQL 310
               P+   A A P LK+L+EGVE+TE+ L    +K GV+KFDP  + FDP+   AM+++
Sbjct: 100 ----PAEARANAEPGLKALIEGVELTERSLLNALEKNGVKKFDPKGQKFDPNFQQAMYEV 155

Query: 311 PDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQA 345
           PD S P GTV  V+++G+T+ +RV+RPA VGV + 
Sbjct: 156 PDPSVPAGTVVQVVQAGFTIGDRVLRPALVGVAKG 190

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.

Rhodopseudomonas palustris (strain TIE-1) (taxid: 395960)

>sp|A4YJR1|GRPE_BRASO Protein GrpE OS=Bradyrhizobium sp. (strain ORS278) GN=grpE PE=3 SV=1

 Score =  137 bits (346), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 69/148 (46%), Positives = 99/148 (66%), Gaps = 8/148 (5%)

Query: 196 QDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDP 255
           +DK+LR+ AEMEN++ RT RE  +++ + I  FA+ +LD+ADNL RA   V        P
Sbjct: 48  RDKMLRTLAEMENLRKRTAREVADARMYGITGFARDVLDIADNLQRALDAV--------P 99

Query: 256 SNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSK 315
           +   A A   LKSL+EGVE+TE+ L    +K GV+KFDP  + FDP+   AM+++PD S 
Sbjct: 100 AETRANADAGLKSLIEGVELTERSLLNTLEKNGVKKFDPTGQKFDPNFQQAMYEVPDPSV 159

Query: 316 PPGTVAHVLKSGYTLYERVIRPAEVGVT 343
           P GTV  V+++G+ + ERV+RPA VGV+
Sbjct: 160 PSGTVVQVVQAGFMIGERVLRPALVGVS 187

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.

Bradyrhizobium sp. (strain ORS278) (taxid: 114615)

>sp|Q07US4|GRPE_RHOP5 Protein GrpE OS=Rhodopseudomonas palustris (strain BisA53) GN=grpE PE=3 SV=1

 Score =  137 bits (346), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/159 (44%), Positives = 106/159 (66%), Gaps = 10/159 (6%)

Query: 185 LMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASS 244
           L+AK  E  + +DK+LR+ AEMEN++ RT RE  +++ + +  FA+ +L++ADNL RA  
Sbjct: 39  LLAK--EAAEARDKMLRTLAEMENLRKRTTREVADARIYGVTAFARDVLEIADNLQRALD 96

Query: 245 VVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRH 304
            V        P+   A A P LK+L++GVE+TE+ L    +K GV+KFDP  + FDP+  
Sbjct: 97  AV--------PAEARANAEPGLKALIDGVELTERSLINALEKNGVKKFDPSGQKFDPNFQ 148

Query: 305 NAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVT 343
            AM+++PD S P GTV  V+++G+ L ERV+RPA VGV+
Sbjct: 149 QAMYEVPDASVPAGTVVQVVQAGFMLGERVLRPALVGVS 187

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.

Rhodopseudomonas palustris (strain BisA53) (taxid: 316055)

>sp|B6JCI1|GRPE_OLICO Protein GrpE OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=grpE PE=3 SV=1

 Score =  137 bits (346), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/155 (45%), Positives = 104/155 (67%), Gaps = 8/155 (5%)

Query: 191 EMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENF 250
           E  + +D++LR+ AEMEN++ RT RE  +++ + I  FA+ +L++ADNL RA        
Sbjct: 48  EAAEAKDRMLRTLAEMENLRKRTQREVADARAYGIAGFARDVLEIADNLQRA-------- 99

Query: 251 LKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQL 310
           L   P+   A A P L +L+EGVE+TE+ L    +K GV+K D   E FDP+ H AMF++
Sbjct: 100 LDAVPAEARAAADPGLTALIEGVELTERSLHRALEKNGVKKLDAAGEKFDPNIHQAMFEV 159

Query: 311 PDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQA 345
           PDNS PPGTV  V+++GY + +RV+RPA VGV++A
Sbjct: 160 PDNSVPPGTVVQVIQTGYMIGDRVLRPALVGVSKA 194

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.

Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) (taxid: 504832)

>sp|P38523|GRPE_YEAST GrpE protein homolog, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MGE1 PE=1 SV=1

 Score =  134 bits (337), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 118/213 (55%), Gaps = 13/213 (6%)

Query: 136 PQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQM 195
           P  T +  + RR R     A S+   ++  ++   + ++ KL    E  L AK +E  ++
Sbjct: 29  PSFTKNVGSMRRMRFYSDEAKSEESKENNEDLTEEQSEIKKL----ESQLSAKTKEASEL 84

Query: 196 QDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDP 255
           +D++LRS A+  N++  T ++ + +K FA+Q FAK LL+  DN G A +  KE  L+   
Sbjct: 85  KDRLLRSVADFRNLQQVTKKDIQKAKDFALQKFAKDLLESVDNFGHALNAFKEEDLQKSK 144

Query: 256 SNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSK 315
                     +  L  GV MT        +K G+EK DP+ EPFDP++H A F+LP   K
Sbjct: 145 E---------ISDLYTGVRMTRDVFENTLRKHGIEKLDPLGEPFDPNKHEATFELPQPDK 195

Query: 316 PPGTVAHVLKSGYTLYERVIRPAEVGVTQAVEN 348
            PGTV HV + G+TL +RVIRPA+VG+ +  EN
Sbjct: 196 EPGTVFHVQQLGFTLNDRVIRPAKVGIVKGEEN 228

Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of SSC1 to substrate proteins and the association of SSC1 with TIM44.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q79V15|GRPE_BRAJA Protein GrpE OS=Bradyrhizobium japonicum (strain USDA 110) GN=grpE PE=3 SV=1

 Score =  134 bits (337), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/154 (46%), Positives = 102/154 (66%), Gaps = 8/154 (5%)

Query: 189 NEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKE 248
            +E  + +D++LR+ AEMEN++ RT +E  +++ + I  FA+ +LD+ADNL RA      
Sbjct: 39  QKEAAEARDRMLRTLAEMENLRKRTTKEVADARLYGITGFARDVLDIADNLQRA------ 92

Query: 249 NFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMF 308
             L   P+   A A P L SL+EGVE+TE+ L    +K GV+KFDP  + FDP+   AMF
Sbjct: 93  --LDAVPAEARAAADPGLTSLIEGVELTERSLLNALEKHGVKKFDPQGQKFDPNFQQAMF 150

Query: 309 QLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGV 342
           ++PD S P GTV  V+++GYT+ ERV+RPA VGV
Sbjct: 151 EVPDASVPAGTVVQVMQAGYTIGERVLRPALVGV 184

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.

Bradyrhizobium japonicum (strain USDA 110) (taxid: 224911)

>sp|Q13E58|GRPE_RHOPS Protein GrpE OS=Rhodopseudomonas palustris (strain BisB5) GN=grpE PE=3 SV=1

 Score =  132 bits (333), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 67/153 (43%), Positives = 100/153 (65%), Gaps = 8/153 (5%)

Query: 191 EMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENF 250
           E  + +DK+LR+ AEMEN++ RT +E  +++ + +  FA+ +L++ADNL RA   V    
Sbjct: 43  EAAEARDKMLRTLAEMENLRRRTAKEVADARTYGVSAFARDVLEIADNLQRALDAV---- 98

Query: 251 LKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQL 310
               P+   A A   LK L+EGVE+TE+ L    +K GV+KFDP  E FDP+   AM+++
Sbjct: 99  ----PAEARANADAGLKGLIEGVELTERSLINALEKNGVKKFDPQGEKFDPNFQQAMYEV 154

Query: 311 PDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVT 343
           PD S P GTV  V+++G+ + ERV+RPA VGV+
Sbjct: 155 PDPSVPAGTVVQVVQAGFMIGERVLRPALVGVS 187

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.

Rhodopseudomonas palustris (strain BisB5) (taxid: 316057)

>sp|P48604|GRPE_DROME GrpE protein homolog, mitochondrial OS=Drosophila melanogaster GN=Roe1 PE=2 SV=2

 Score =  132 bits (333), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/170 (43%), Positives = 103/170 (60%), Gaps = 13/170 (7%)

Query: 176 KLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDV 235
           KL KE    L A  E+  ++ DK  RS A+ EN+++R  ++  ++K F IQ+F K LL+V
Sbjct: 57  KLTKE----LAAAKEQNAELMDKYKRSLADSENMRNRLNKQISDAKIFGIQSFCKDLLEV 112

Query: 236 ADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPI 295
           AD LG A+  V        P +  +G   L K+L EG+ MT   L +VFK+ G+E  DPI
Sbjct: 113 ADTLGHATQAV--------PKDKLSGNADL-KNLYEGLTMTRASLLQVFKRHGLEPLDPI 163

Query: 296 NEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQA 345
           N+ FDP++H A+FQ  D +  P TV  V K GY L+ER IRPA VGV++ 
Sbjct: 164 NQKFDPNQHEALFQKEDKTVEPNTVVEVTKLGYKLHERCIRPALVGVSKC 213

Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of mitochondrial HSP70 to substrate proteins.

Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	357
255580752	308	Protein grpE, putative [Ricinus communis	0.843	0.977	0.576	1e-100
224133294	265	predicted protein [Populus trichocarpa]	0.722	0.973	0.655	7e-97
147811306	413	hypothetical protein VITISV_018795 [Viti	0.865	0.748	0.603	2e-95
359494074	298	PREDICTED: protein grpE-like [Vitis vini	0.806	0.966	0.548	6e-90
224116576	244	predicted protein [Populus trichocarpa]	0.680	0.995	0.622	8e-89
3851640	304	chaperone GrpE type 2 [Nicotiana tabacum	0.834	0.980	0.528	2e-87
18416821	327	molecular chaperone GrpE [Arabidopsis th	0.882	0.963	0.555	1e-86
359806326	290	uncharacterized protein LOC100812682 [Gl	0.803	0.989	0.514	6e-86
297799314	324	hypothetical protein ARALYDRAFT_492124 [	0.876	0.966	0.545	1e-82
4455201	311	grpE like protein [Arabidopsis thaliana]	0.837	0.961	0.544	3e-81

>gi|255580752|ref|XP_002531197.1| Protein grpE, putative [Ricinus communis] gi|223529199|gb|EEF31174.1| Protein grpE, putative [Ricinus communis]

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 208/361 (57%), Positives = 248/361 (68%), Gaps = 60/361 (16%)

Query: 1   MMASRV-LSRATRCVGRRALLLVPTSGKQHSPALSNQFHSLVFESPN-----KVSLFHQT 54
           M+ SRV LSRA+R VGRR+LLL+  S KQ  P  SNQ  SLV  + N     +VSLFH +
Sbjct: 1   MLISRVVLSRASRSVGRRSLLLLSPSQKQQLPIFSNQIESLVHVNSNQFVAGQVSLFHHS 60

Query: 55  TLNSSIFQRFGF-SSASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNGD 113
             +SS FQRFGF SSASPE NEKE GS  +NN               D+   E    NGD
Sbjct: 61  AFSSSPFQRFGFTSSASPEANEKE-GSTAENNA--------------DSTNVEPETSNGD 105

Query: 114 AKASDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDD 173
            K S+E  E                                       DS++E +LS DD
Sbjct: 106 TKPSNETREP--------------------------------------DSDTEGDLSMDD 127

Query: 174 LVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALL 233
           LVKL+ E+EELL  K++E+++MQDKVLR++AEMENV +RT REAENS+KFAIQNFAK LL
Sbjct: 128 LVKLVAEKEELLKLKHKEIEKMQDKVLRTYAEMENVMERTKREAENSRKFAIQNFAKGLL 187

Query: 234 DVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFD 293
           DVADNLGRASSVVK+++ KID S DTAGAVPLLK+LLEGVEMTEKQL EVF+K GVEK+D
Sbjct: 188 DVADNLGRASSVVKDSYSKIDTSTDTAGAVPLLKTLLEGVEMTEKQLAEVFRKSGVEKYD 247

Query: 294 PINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVENDRAEN 353
           P +EPFDPHRHNA+F++PD+SKPPGTVA VLK+GY L++RVIRPAEVGVT+ VEND A N
Sbjct: 248 PRDEPFDPHRHNAVFEVPDSSKPPGTVAVVLKAGYLLHDRVIRPAEVGVTKEVENDTASN 307

Query: 354 N 354
           N
Sbjct: 308 N 308

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133294|ref|XP_002321532.1| predicted protein [Populus trichocarpa] gi|222868528|gb|EEF05659.1| predicted protein [Populus trichocarpa]

 Score =  360 bits (923), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 194/296 (65%), Positives = 227/296 (76%), Gaps = 38/296 (12%)

Query: 54  TTLNSSIFQRFGF-SSASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNG 112
           + LNS  FQ FGF SSASPEP EKEQG+  D             +DSV            
Sbjct: 1   SALNSPPFQNFGFTSSASPEPTEKEQGNLSDK-----------TEDSV------------ 37

Query: 113 DAKASDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRD 172
                         TKESGF+S+ Q T+S+S KRRR V+K+TA+SDSDS++ S+  LS D
Sbjct: 38  -----------LHETKESGFNSESQQTISRSGKRRR-VTKRTAYSDSDSEAGSD--LSMD 83

Query: 173 DLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKAL 232
           DLVKL+ E+EELL AK++E++ +QDKVLR++AEMENVK+RT REAENSKKFAIQNFAK+L
Sbjct: 84  DLVKLVAEKEELLEAKHKEIETIQDKVLRAYAEMENVKERTKREAENSKKFAIQNFAKSL 143

Query: 233 LDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKF 292
           LDVADNLGRASSVVK NF KID SNDTA  VPLLK+LLEGVEMTEKQLGEVFKK+G+EKF
Sbjct: 144 LDVADNLGRASSVVKGNFSKIDVSNDTAQVVPLLKTLLEGVEMTEKQLGEVFKKYGIEKF 203

Query: 293 DPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVEN 348
           DP NEPFDPHRHNA+FQ+PD SKPPGTVA VLK+GY L++RVIRPAEVGVT+ VEN
Sbjct: 204 DPTNEPFDPHRHNAIFQVPDASKPPGTVAAVLKAGYMLHDRVIRPAEVGVTREVEN 259

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147811306|emb|CAN76715.1| hypothetical protein VITISV_018795 [Vitis vinifera]

 Score =  355 bits (910), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 215/356 (60%), Positives = 258/356 (72%), Gaps = 47/356 (13%)

Query: 6   VLSRATRCV---GRRALLLVPTSGKQHSPALSNQFHSLVFESPNKV-----SLFHQTTLN 57
           VL R+TR +   GR + LL P S         N F  L+ ES +KV     SL H    N
Sbjct: 95  VLFRSTRTLLAQGRTSSLLAPQSHL-------NTF--LIGESTDKVVATQVSLLHHLVHN 145

Query: 58  SSIFQRFGFSS-ASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNGDAKA 116
           +SIFQRFG SS ASP+ NEKE   + +  G            +V+N+GA A     DA+ 
Sbjct: 146 ASIFQRFGISSSASPQTNEKETTQSGNEQG------------TVENDGAPA-----DAEP 188

Query: 117 SDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDDLVK 176
           +      T++ +ESG++SKPQS   +S KRRRR +K+TAFSDSDS    E +LS DDL+K
Sbjct: 189 AK-----TNQAEESGYNSKPQS---ESVKRRRRGTKRTAFSDSDS----EADLSMDDLMK 236

Query: 177 LLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVA 236
           L+ E+EELL  KN+E+++MQDKVLRS+AEMENV +R  REAENSKKFAIQNFAK+LLDVA
Sbjct: 237 LVVEKEELLKMKNKEIEKMQDKVLRSYAEMENVMERARREAENSKKFAIQNFAKSLLDVA 296

Query: 237 DNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPIN 296
           DNLGRAS VVKE+F KID S DTAGAVPLLK+LLEGVEMTEKQLGEVF+KFG+EKFDP N
Sbjct: 297 DNLGRASLVVKESFSKIDESKDTAGAVPLLKTLLEGVEMTEKQLGEVFRKFGMEKFDPTN 356

Query: 297 EPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVENDRAE 352
           E FDPHRHNA FQ+PD SKP GTVA VLK+GY L++RVIRPAEVGVTQAV+N+  E
Sbjct: 357 EQFDPHRHNAAFQIPDPSKPSGTVAVVLKAGYMLHDRVIRPAEVGVTQAVDNNETE 412

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359494074|ref|XP_002277588.2| PREDICTED: protein grpE-like [Vitis vinifera] gi|297737494|emb|CBI26695.3| unnamed protein product [Vitis vinifera]

 Score =  337 bits (864), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 198/361 (54%), Positives = 236/361 (65%), Gaps = 73/361 (20%)

Query: 1   MMASRVLSRATRCV---GRRALLLVPTSGKQHSPALSNQFHSLVFESPNKV-----SLFH 52
           M ASRVL R+TR +   GR + LL P S         N F  L+ ES +KV     SL H
Sbjct: 1   MFASRVLFRSTRTLLAQGRTSSLLAPQSHL-------NTF--LIGESTDKVVATQVSLLH 51

Query: 53  QTTLNSSIFQRFGFSS-ASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPN 111
               N+SIFQRFG SS ASP+ NEKE   + +  G            +V+N+GA A    
Sbjct: 52  HLVHNASIFQRFGISSSASPQTNEKETTQSGNEQG------------TVENDGAPA---- 95

Query: 112 GDAKASDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSR 171
                                D++P  T                  +   +S+SE +LS 
Sbjct: 96  ---------------------DAEPAKT------------------NQAEESDSEADLSM 116

Query: 172 DDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKA 231
           DDL+KL+ E+EELL  KN+E+++MQDKVLRS+AEMENV +R  REAENSKKFAIQNFAK+
Sbjct: 117 DDLMKLVLEKEELLKMKNKEIEKMQDKVLRSYAEMENVMERARREAENSKKFAIQNFAKS 176

Query: 232 LLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEK 291
           LLDVADNLGRAS VVKE+F KID S DTAGAVPLLK+LLEGVEMTEKQLGEVF+KFG+EK
Sbjct: 177 LLDVADNLGRASLVVKESFSKIDESKDTAGAVPLLKTLLEGVEMTEKQLGEVFRKFGMEK 236

Query: 292 FDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVENDRA 351
           FDP NE FDPHRHNA FQ+PD SKP GTVA VLK+GY L++RVIRPAEVGVTQAV+N+  
Sbjct: 237 FDPTNEQFDPHRHNAAFQIPDPSKPSGTVAVVLKAGYMLHDRVIRPAEVGVTQAVDNNET 296

Query: 352 E 352
           E
Sbjct: 297 E 297

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116576|ref|XP_002317335.1| predicted protein [Populus trichocarpa] gi|222860400|gb|EEE97947.1| predicted protein [Populus trichocarpa]

 Score =  333 bits (854), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 185/297 (62%), Positives = 213/297 (71%), Gaps = 54/297 (18%)

Query: 54  TTLNSSIFQRFGF-SSASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNG 112
           + LNSS+FQ FGF SSASPEP EKE GSA +N+GA +     D K S + NG+       
Sbjct: 1   SALNSSLFQNFGFTSSASPEPGEKEHGSAVENDGAPT-----DVK-SEETNGS------- 47

Query: 113 DAKASDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRD 172
                                                  K+TAFSDSD+++ S+  LS D
Sbjct: 48  --------------------------------------IKRTAFSDSDAEAVSD--LSMD 67

Query: 173 DLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKAL 232
           DLVKL+ E+EELL  K++EM+ MQDKVLR++AEMENVK+RT REAENSKKFAIQNFAK+L
Sbjct: 68  DLVKLVMEKEELLKEKHKEMETMQDKVLRTYAEMENVKERTKREAENSKKFAIQNFAKSL 127

Query: 233 LDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKF 292
           LDVADNLGRASSVVK NF KI+ SND A  VPLLK+LLEGVEMTEKQLGEVFKK+GVEKF
Sbjct: 128 LDVADNLGRASSVVKGNFSKINVSNDAADVVPLLKTLLEGVEMTEKQLGEVFKKYGVEKF 187

Query: 293 DPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVEND 349
           DPINEPFDPHRHNAMF++PD  KPPG VA VLK GY L+ERVIRPAEVGVT+AVE D
Sbjct: 188 DPINEPFDPHRHNAMFEVPDPLKPPGIVAAVLKVGYMLHERVIRPAEVGVTRAVEKD 244

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3851640|gb|AAC72387.1| chaperone GrpE type 2 [Nicotiana tabacum]

 Score =  328 bits (841), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 192/363 (52%), Positives = 233/363 (64%), Gaps = 65/363 (17%)

Query: 1   MMASRVLSRATRCV---GRRALLLVP--TSGKQHSPALSNQFHSLVFESPNKVSLFHQTT 55
           M  SR+ SR  R +    R ++LL       +QH P L+ QFHSL  +   KVSLFH++ 
Sbjct: 1   MSVSRISSRFRRAILNQCRSSVLLYSREQQRQQHVPVLAFQFHSLR-DFKEKVSLFHESA 59

Query: 56  LNSSIFQRFGFSS-ASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNGDA 114
           L     QRFG SS ASP+PNEKE   +    G+                     K NGD 
Sbjct: 60  L-----QRFGISSSASPQPNEKESSQSQSEPGS--------------------TKENGDC 94

Query: 115 KASDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDDL 174
           +AS                                VS  +   D   +S++E +LSRDDL
Sbjct: 95  EAS--------------------------------VSADSHVQDEKDESDTE-DLSRDDL 121

Query: 175 VKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLD 234
           VKL+ E+EELL  K+ E ++MQDKVLR++AEMENV +RT REAENSKKFAIQNF KALLD
Sbjct: 122 VKLVAEKEELLKMKDGEFQKMQDKVLRTYAEMENVMNRTKREAENSKKFAIQNFVKALLD 181

Query: 235 VADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDP 294
           V+DNLGRASSVVKE+F KID S DTAGAVPLLK+LLEGVEMT+KQL EVFKKFGV K+DP
Sbjct: 182 VSDNLGRASSVVKESFSKIDESKDTAGAVPLLKTLLEGVEMTDKQLAEVFKKFGVGKYDP 241

Query: 295 INEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVENDRAENN 354
            NE FDP++HNA+FQ+PD  K PG VA  LKSGYTL+ER+IRPAEVGVT AVE+ +A+ N
Sbjct: 242 TNEQFDPNKHNAIFQVPDPKKAPGVVAVCLKSGYTLHERIIRPAEVGVTVAVESTQADQN 301

Query: 355 DQA 357
            +A
Sbjct: 302 TEA 304

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18416821|ref|NP_567757.1| molecular chaperone GrpE [Arabidopsis thaliana] gi|21593024|gb|AAM64973.1| grpE like protein [Arabidopsis thaliana] gi|26451456|dbj|BAC42827.1| putative grpE protein [Arabidopsis thaliana] gi|29824143|gb|AAP04032.1| putative grpE protein [Arabidopsis thaliana] gi|332659851|gb|AEE85251.1| molecular chaperone GrpE [Arabidopsis thaliana]

 Score =  326 bits (835), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 195/351 (55%), Positives = 245/351 (69%), Gaps = 36/351 (10%)

Query: 1   MMASRVLSRATRCVG-RRALLLVPTSGKQHSPALSNQFHSLVFESPNKVSLFHQTTLNSS 59
           M+  R+LSR TR  G R +L  V    +  +P  S++FHSL  +  +K+     + ++S 
Sbjct: 1   MLVLRILSRVTRNAGIRSSLSAVTLPARNQTPVFSSRFHSLAHDFSHKLVPAQMSMMDSF 60

Query: 60  IFQRFGFSSA-SPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNGDAKASD 118
             QRF FSS+ SPE +EK+  +       E P              AEA +P        
Sbjct: 61  ALQRFNFSSSTSPESDEKKTHTEASKTSEEKPT-------------AEANQP-------- 99

Query: 119 EGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIE-LSRDDLVKL 177
                       G DS+ + +V+ S KR+R+ +K  A S S+SDSES+ + LS DDLVKL
Sbjct: 100 ------------GLDSESKDSVTDSAKRKRKGAKGAASSSSESDSESDDDELSADDLVKL 147

Query: 178 LKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVAD 237
           + E+EELL  K EE+KQ++DKVLR++AEMENV DRT R+AEN+KK+A+QNFAK+LLDVAD
Sbjct: 148 VAEKEELLSEKEEEIKQLKDKVLRTYAEMENVMDRTRRDAENTKKYAVQNFAKSLLDVAD 207

Query: 238 NLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINE 297
           NLGRASSVVKE+F K+D S D+AGA PLLK+LLEGVEMTEKQL EVFKKFG+EK+DPINE
Sbjct: 208 NLGRASSVVKESFSKLDTSEDSAGAAPLLKTLLEGVEMTEKQLAEVFKKFGMEKYDPINE 267

Query: 298 PFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVEN 348
           PFDP+RHNA+FQ+PD SKP GTVAHVLKSGYTLY+RVIRPAEVGVTQ  EN
Sbjct: 268 PFDPNRHNAVFQVPDASKPEGTVAHVLKSGYTLYDRVIRPAEVGVTQGGEN 318

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806326|ref|NP_001240970.1| uncharacterized protein LOC100812682 [Glycine max] gi|255638729|gb|ACU19669.1| unknown [Glycine max]

 Score =  323 bits (829), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 181/352 (51%), Positives = 221/352 (62%), Gaps = 65/352 (18%)

Query: 1   MMASRVLSRATRCVGRR-ALLLVPTSGKQHSPALSNQFHSLVFESPNKVSLFHQTTLNSS 59
           M A RVLSR++  + R   L  V  + +  S  LSN FHSL+  SPNK+       LNSS
Sbjct: 1   MFAYRVLSRSSAILSRSFTLFSVSRNSQPFSTTLSNNFHSLLHPSPNKLIPVQTNFLNSS 60

Query: 60  IFQRFGFSSASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNGDAKASDE 119
           +  RFGFSS +   +  E+    D +                                 E
Sbjct: 61  LTSRFGFSSTASHEHASEEAKVSDQS---------------------------------E 87

Query: 120 GMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDDLVKLLK 179
             EA D+TKES                               D ESE +LSRDDL+KL+ 
Sbjct: 88  QAEAADQTKES-------------------------------DVESECDLSRDDLIKLVA 116

Query: 180 EREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNL 239
           E+E+LL  K++E+++MQDKVLR++AEMENV DRT REAENSKKFAIQNFAK+LLDVADNL
Sbjct: 117 EKEQLLKLKHKEIEKMQDKVLRTYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNL 176

Query: 240 GRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPF 299
           GRASSVVK+NF KI+   +++ A  LLK+LLEGVEMTEKQL EV KKFGVEKFDP NEPF
Sbjct: 177 GRASSVVKDNFSKIESPEESSEAAQLLKTLLEGVEMTEKQLAEVLKKFGVEKFDPTNEPF 236

Query: 300 DPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVENDRA 351
           DPH HNA+FQ+PD SK PGTV  VLK+GY LY+RV+RPAEVGVTQ VE+++A
Sbjct: 237 DPHMHNAIFQIPDASKAPGTVGVVLKAGYKLYDRVLRPAEVGVTQEVEDNKA 288

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297799314|ref|XP_002867541.1| hypothetical protein ARALYDRAFT_492124 [Arabidopsis lyrata subsp. lyrata] gi|297313377|gb|EFH43800.1| hypothetical protein ARALYDRAFT_492124 [Arabidopsis lyrata subsp. lyrata]

 Score =  313 bits (801), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 191/350 (54%), Positives = 238/350 (68%), Gaps = 37/350 (10%)

Query: 1   MMASRVLSRATRCVGRRALL-LVPTSGKQHSPALSNQFHSLVFESPNKVSLFHQTTLNSS 59
           M+ SR+LSR TR  G R+ L  V    +   P  S++FHS   E  +K+ +  Q +++S 
Sbjct: 1   MLVSRILSRVTRNAGLRSYLSAVTLPARNQIPVFSSRFHSRDHEFSHKL-VPAQVSMDSV 59

Query: 60  IFQRFGFSSA-SPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNGDAKASD 118
             QRF FSS  SPE +EK+  +       E P              AEA +P        
Sbjct: 60  ALQRFSFSSTTSPESDEKKSNTEASKTSEEKPT-------------AEANQP-------- 98

Query: 119 EGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDDLVKLL 178
                       G D++   +V+ S KR+R+ +K  A S        + ELS+DDLVKL+
Sbjct: 99  ------------GLDTESIDSVTDSTKRKRKGAKGAA-SSESDSESDDDELSKDDLVKLV 145

Query: 179 KEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADN 238
            E+EELL  K EE+K+M+DKVLR++AEMENV DRT R+AEN+KK+A+QNFAK+LLDVADN
Sbjct: 146 AEKEELLSEKEEEIKKMKDKVLRTYAEMENVMDRTRRDAENTKKYAVQNFAKSLLDVADN 205

Query: 239 LGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEP 298
           LGRASSVVKE+F K+D S D+AGA PLLK+LLEGVEMTEKQL EVFKKFG+EK+DPINEP
Sbjct: 206 LGRASSVVKESFSKLDTSEDSAGAAPLLKTLLEGVEMTEKQLAEVFKKFGMEKYDPINEP 265

Query: 299 FDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVEN 348
           FDP+RHNA+FQ+PD SKP GTVAHVLK GYTLY+RVIRPAEVGVTQA EN
Sbjct: 266 FDPNRHNAVFQVPDASKPEGTVAHVLKYGYTLYDRVIRPAEVGVTQAGEN 315

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4455201|emb|CAB36524.1| grpE like protein [Arabidopsis thaliana] gi|7269530|emb|CAB79533.1| grpE like protein [Arabidopsis thaliana]

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 191/351 (54%), Positives = 239/351 (68%), Gaps = 52/351 (14%)

Query: 1   MMASRVLSRATRCVG-RRALLLVPTSGKQHSPALSNQFHSLVFESPNKVSLFHQTTLNSS 59
           M+  R+LSR TR  G R +L  V    +  +P +           P ++S+     ++S 
Sbjct: 1   MLVLRILSRVTRNAGIRSSLSAVTLPARNQTPLV-----------PAQMSM-----MDSF 44

Query: 60  IFQRFGFSSA-SPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNGDAKASD 118
             QRF FSS+ SPE +EK+  +       E P              AEA +P        
Sbjct: 45  ALQRFNFSSSTSPESDEKKTHTEASKTSEEKPT-------------AEANQP-------- 83

Query: 119 EGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIE-LSRDDLVKL 177
                       G DS+ + +V+ S KR+R+ +K  A S S+SDSES+ + LS DDLVKL
Sbjct: 84  ------------GLDSESKDSVTDSAKRKRKGAKGAASSSSESDSESDDDELSADDLVKL 131

Query: 178 LKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVAD 237
           + E+EELL  K EE+KQ++DKVLR++AEMENV DRT R+AEN+KK+A+QNFAK+LLDVAD
Sbjct: 132 VAEKEELLSEKEEEIKQLKDKVLRTYAEMENVMDRTRRDAENTKKYAVQNFAKSLLDVAD 191

Query: 238 NLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINE 297
           NLGRASSVVKE+F K+D S D+AGA PLLK+LLEGVEMTEKQL EVFKKFG+EK+DPINE
Sbjct: 192 NLGRASSVVKESFSKLDTSEDSAGAAPLLKTLLEGVEMTEKQLAEVFKKFGMEKYDPINE 251

Query: 298 PFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVEN 348
           PFDP+RHNA+FQ+PD SKP GTVAHVLKSGYTLY+RVIRPAEVGVTQ  EN
Sbjct: 252 PFDPNRHNAVFQVPDASKPEGTVAHVLKSGYTLYDRVIRPAEVGVTQGGEN 302

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	357
TAIR|locus:2161615	302	MGE1 "mitochondrial GrpE 1" [A	0.470	0.556	0.684	4.2e-71
TAIR|locus:2116277	327	AR192 [Arabidopsis thaliana (t	0.677	0.740	0.583	3.8e-69
GENEDB_PFALCIPARUM|PF11_0258	301	PF11_0258 "co-chaperone GrpE,	0.400	0.475	0.421	6.9e-32
UNIPROTKB|Q8IIB6	301	PF11_0258 "Co-chaperone GrpE,	0.400	0.475	0.421	6.9e-32
SGD|S000005758	228	MGE1 "Mitochondrial matrix coc	0.420	0.657	0.415	5.6e-29
CGD|CAL0002414	242	MGE1 [Candida albicans (taxid:	0.422	0.623	0.428	1.5e-28
FB|FBgn0014877	213	Roe1 "Roe1" [Drosophila melano	0.408	0.685	0.438	3.1e-28
UNIPROTKB|Q5ZHV6	222	GRPEL1 "GrpE protein homolog"	0.408	0.657	0.448	1.7e-27
RGD|70947	217	Grpel1 "GrpE-like 1, mitochond	0.408	0.672	0.448	7.3e-27
MGI|MGI:1334417	217	Grpel1 "GrpE-like 1, mitochond	0.408	0.672	0.442	1.5e-26

TAIR|locus:2161615 MGE1 "mitochondrial GrpE 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 592 (213.5 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
 Identities = 115/168 (68%), Positives = 140/168 (83%)

Query:   190 EEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKEN 249
             +++ +M+DK LR++AE +N+ DRT R AE++KKFA+QNFA +LLDVADNL RASSVVKE+
Sbjct:   135 KDIMEMKDKFLRTYAEQQNLMDRTNRNAESAKKFAVQNFATSLLDVADNLERASSVVKES 194

Query:   250 FLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQ 309
             F KID S D AGA PLLK+LLEGVEMTEKQL EVF+K G+ K DP+NEPF+P+RHNA+FQ
Sbjct:   195 FSKIDTSKDLAGATPLLKNLLEGVEMTEKQLAEVFRKAGLVKEDPLNEPFNPNRHNAVFQ 254

Query:   310 LPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVENDRAENNDQA 357
             +PD SKP GT+AHVLKSGY+LY+RVIRPAEVGVT AVEN        A
Sbjct:   255 VPDASKPKGTIAHVLKSGYSLYDRVIRPAEVGVTCAVENQEGGKESAA 302

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005524 "ATP binding" evidence=IDA

GO:0005507 "copper ion binding" evidence=IDA

GO:0009411 "response to UV" evidence=IEP

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2116277 AR192 [Arabidopsis thaliana (taxid:3702)]

 Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
 Identities = 143/245 (58%), Positives = 175/245 (71%)

Query:   114 AKASDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFXXXXXXXXXXXXXXXXX 173
             +K S+E  + T    + G DS+ + +V+ S KR+R+ +K  A                  
Sbjct:    85 SKTSEE--KPTAEANQPGLDSESKDSVTDSAKRKRKGAKGAASSSSESDSESDDDELSAD 142

Query:   174 XXXXXXXXXXXXXXXNEE-MKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKAL 232
                             EE +KQ++DKVLR++AEMENV DRT R+AEN+KK+A+QNFAK+L
Sbjct:   143 DLVKLVAEKEELLSEKEEEIKQLKDKVLRTYAEMENVMDRTRRDAENTKKYAVQNFAKSL 202

Query:   233 LDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKF 292
             LDVADNLGRASSVVKE+F K+D S D+AGA PLLK+LLEGVEMTEKQL EVFKKFG+EK+
Sbjct:   203 LDVADNLGRASSVVKESFSKLDTSEDSAGAAPLLKTLLEGVEMTEKQLAEVFKKFGMEKY 262

Query:   293 DPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVENDRAE 352
             DPINEPFDP+RHNA+FQ+PD SKP GTVAHVLKSGYTLY+RVIRPAEVGVTQ  EN   +
Sbjct:   263 DPINEPFDPNRHNAVFQVPDASKPEGTVAHVLKSGYTLYDRVIRPAEVGVTQGGENQEEK 322

Query:   353 NNDQA 357
                 A
Sbjct:   323 KESDA 327

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0005507 "copper ion binding" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009408 "response to heat" evidence=IEP

GO:0010286 "heat acclimation" evidence=IGI

GO:0006626 "protein targeting to mitochondrion" evidence=RCA

GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=RCA

GENEDB_PFALCIPARUM|PF11_0258 PF11_0258 "co-chaperone GrpE, putative" [Plasmodium falciparum (taxid:5833)]

 Score = 317 (116.6 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
 Identities = 64/152 (42%), Positives = 102/152 (67%)

Query:   193 KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLK 252
             K +++K L   AE EN+++R ++E E SK + I NFAK+LLDVADNL  A   + E  LK
Sbjct:   158 KVLKEKYLSVLAENENLRNRYMKEIETSKLYCISNFAKSLLDVADNLSLAIKNINEESLK 217

Query:   253 IDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPD 312
                +N+       + ++ +G+EMTE  L  +F K+G++K++PINE F+P  H A+F++ D
Sbjct:   218 ---TNEE------INNIYKGIEMTETILHNIFNKYGIDKYNPINEKFNPQLHEAIFEIND 268

Query:   313 NSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ 344
             ++K  GTVA V++ GY + +R++R A+VGV +
Sbjct:   269 STKEKGTVATVIQHGYKIKDRILRAAKVGVVK 300

GO:0051082 "unfolded protein binding" evidence=ISS

GO:0005759 "mitochondrial matrix" evidence=ISS

GO:0030150 "protein import into mitochondrial matrix" evidence=TAS

UNIPROTKB|Q8IIB6 PF11_0258 "Co-chaperone GrpE, putative" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 317 (116.6 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
 Identities = 64/152 (42%), Positives = 102/152 (67%)

Query:   193 KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLK 252
             K +++K L   AE EN+++R ++E E SK + I NFAK+LLDVADNL  A   + E  LK
Sbjct:   158 KVLKEKYLSVLAENENLRNRYMKEIETSKLYCISNFAKSLLDVADNLSLAIKNINEESLK 217

Query:   253 IDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPD 312
                +N+       + ++ +G+EMTE  L  +F K+G++K++PINE F+P  H A+F++ D
Sbjct:   218 ---TNEE------INNIYKGIEMTETILHNIFNKYGIDKYNPINEKFNPQLHEAIFEIND 268

Query:   313 NSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ 344
             ++K  GTVA V++ GY + +R++R A+VGV +
Sbjct:   269 STKEKGTVATVIQHGYKIKDRILRAAKVGVVK 300

GO:0005759 "mitochondrial matrix" evidence=ISS

GO:0030150 "protein import into mitochondrial matrix" evidence=TAS

GO:0051082 "unfolded protein binding" evidence=ISS

SGD|S000005758 MGE1 "Mitochondrial matrix cochaperone" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
 Identities = 66/159 (41%), Positives = 97/159 (61%)

Query:   190 EEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKEN 249
             +E  +++D++LRS A+  N++  T ++ + +K FA+Q FAK LL+  DN G A +  KE 
Sbjct:    79 KEASELKDRLLRSVADFRNLQQVTKKDIQKAKDFALQKFAKDLLESVDNFGHALNAFKEE 138

Query:   250 FLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQ 309
              L+   S +       +  L  GV MT        +K G+EK DP+ EPFDP++H A F+
Sbjct:   139 DLQ--KSKE-------ISDLYTGVRMTRDVFENTLRKHGIEKLDPLGEPFDPNKHEATFE 189

Query:   310 LPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVEN 348
             LP   K PGTV HV + G+TL +RVIRPA+VG+ +  EN
Sbjct:   190 LPQPDKEPGTVFHVQQLGFTLNDRVIRPAKVGIVKGEEN 228

GO:0042026 "protein refolding" evidence=IDA

GO:0005739 "mitochondrion" evidence=IEA;IDA

GO:0030150 "protein import into mitochondrial matrix" evidence=IMP

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA;IDA;IMP

GO:0001405 "presequence translocase-associated import motor" evidence=IDA

GO:0005759 "mitochondrial matrix" evidence=IEA;IDA

GO:0051087 "chaperone binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

CGD|CAL0002414 MGE1 [Candida albicans (taxid:5476)]

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 69/161 (42%), Positives = 103/161 (63%)

Query:   189 NEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKE 248
             ++E+  M++   R+ A+  ++++ T  E + +K FA+Q FAK LLD  DN   A   VKE
Sbjct:    91 DKELASMKNHYARAIADFRHLQETTKTEVQKAKDFALQKFAKDLLDSLDNFNLALGHVKE 150

Query:   249 NFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMF 308
             + LK+   ND       ++SL EGV+MT+    +   K+G+EK DPI++ FDP+ H A F
Sbjct:   151 DTLKL---NDE------VRSLYEGVDMTKTVFEKTLNKYGIEKIDPIDQVFDPNLHEATF 201

Query:   309 QLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVEND 349
             Q+ +  K PGTV HV + GYTL ERV+RPA+VGV ++ E+D
Sbjct:   202 QMANPGKEPGTVFHVQQVGYTLNERVLRPAKVGVVKS-EDD 241

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0001405 "presequence translocase-associated import motor" evidence=IEA

GO:0042026 "protein refolding" evidence=IEA

GO:0030150 "protein import into mitochondrial matrix" evidence=IEA

FB|FBgn0014877 Roe1 "Roe1" [Drosophila melanogaster (taxid:7227)]

 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 68/155 (43%), Positives = 99/155 (63%)

Query:   190 EEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKEN 249
             E+  ++ DK  RS A+ EN+++R  ++  ++K F IQ+F K LL+VAD LG A+  V ++
Sbjct:    67 EQNAELMDKYKRSLADSENMRNRLNKQISDAKIFGIQSFCKDLLEVADTLGHATQAVPKD 126

Query:   250 FLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQ 309
               K+  + D       LK+L EG+ MT   L +VFK+ G+E  DPIN+ FDP++H A+FQ
Sbjct:   127 --KLSGNAD-------LKNLYEGLTMTRASLLQVFKRHGLEPLDPINQKFDPNQHEALFQ 177

Query:   310 LPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ 344
               D +  P TV  V K GY L+ER IRPA VGV++
Sbjct:   178 KEDKTVEPNTVVEVTKLGYKLHERCIRPALVGVSK 212

GO:0051082 "unfolded protein binding" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS;NAS

GO:0006457 "protein folding" evidence=ISS;NAS

GO:0005759 "mitochondrial matrix" evidence=ISS;NAS

GO:0006626 "protein targeting to mitochondrion" evidence=ISS;NAS

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0022008 "neurogenesis" evidence=IMP

UNIPROTKB|Q5ZHV6 GRPEL1 "GrpE protein homolog" [Gallus gallus (taxid:9031)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 70/156 (44%), Positives = 99/156 (63%)

Query:   190 EEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRAS-SVVKE 248
             E++K++ DK  R+ A+ ENV+ R+ +  E +K + IQ+F K LL+VAD L +A+ SV KE
Sbjct:    74 EQLKEVTDKYKRALADAENVRQRSQKLVEEAKLYGIQSFCKDLLEVADILEKATESVPKE 133

Query:   249 NFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMF 308
                +I   N      P LKSL EG+ MTE Q+ +VFKK G+ + +P+   FDP+ H A+F
Sbjct:   134 ---EIKDEN------PHLKSLYEGLVMTEVQIQKVFKKHGLLRLNPVGAKFDPYEHEALF 184

Query:   309 QLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ 344
               P   K PGT+A V K GY L+ R +RPA VGV +
Sbjct:   185 HAPMEGKEPGTIALVSKIGYKLHGRTLRPALVGVVK 220

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

RGD|70947 Grpel1 "GrpE-like 1, mitochondrial" [Rattus norvegicus (taxid:10116)]

 Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
 Identities = 70/156 (44%), Positives = 97/156 (62%)

Query:   190 EEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRAS-SVVKE 248
             E++K+  +K  R+ A+ EN++ R+ +  E +K + IQ F K LL+VAD L +A+ SV KE
Sbjct:    69 EQLKETMEKYKRALADTENLRQRSQKLVEEAKLYGIQGFCKDLLEVADILEKATQSVPKE 128

Query:   249 NFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMF 308
                  + SN+     P LKSL EG+ MTE Q+ +VF K G+ + DPI   FDP+ H A+F
Sbjct:   129 -----EVSNNN----PHLKSLYEGLVMTEVQIQKVFTKHGLLRLDPIGAKFDPYEHEALF 179

Query:   309 QLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ 344
               P   K PGTVA V K GY L+ R +RPA VGV +
Sbjct:   180 HTPVEGKEPGTVALVSKVGYKLHGRTLRPALVGVVK 215

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISO

GO:0005759 "mitochondrial matrix" evidence=IEA;ISO

GO:0006457 "protein folding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA;ISO

GO:0051087 "chaperone binding" evidence=IEA

MGI|MGI:1334417 Grpel1 "GrpE-like 1, mitochondrial" [Mus musculus (taxid:10090)]

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 69/156 (44%), Positives = 96/156 (61%)

Query:   190 EEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRAS-SVVKE 248
             E++++  +K  R+ A+ EN++ R+ +  E +K + IQ F K LL+VAD L +A+ SV KE
Sbjct:    69 EQLRETMEKYKRALADTENLRQRSQKLVEEAKLYGIQGFCKDLLEVADILEKATQSVPKE 128

Query:   249 NFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMF 308
                    SN+     P LKSL EG+ MTE Q+ +VF K G+ + DPI   FDP+ H A+F
Sbjct:   129 EI-----SNNN----PHLKSLYEGLVMTEVQIQKVFTKHGLLRLDPIGAKFDPYEHEALF 179

Query:   309 QLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ 344
               P   K PGTVA V K GY L+ R +RPA VGV +
Sbjct:   180 HTPVEGKEPGTVALVSKVGYKLHGRTLRPALVGVVK 215

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005759 "mitochondrial matrix" evidence=ISO

GO:0006457 "protein folding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=ISO

GO:0051087 "chaperone binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.XV.1192.1	hypothetical protein; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner (By similarity) (265 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.VII.1758.1	annotation not avaliable (391 aa)	•		•				•		0.504
	gw1.XIV.2088.1	hypothetical protein (955 aa)							•		0.489
	fgenesh4_pg.C_scaffold_15407000001	Predicted protein (325 aa)							•		0.484
	fgenesh4_pg.C_scaffold_21419000001	Predicted protein (299 aa)					•		•		0.482
	estExt_fgenesh4_pg.C_1500058	hypothetical protein (706 aa)	•		•				•		0.481
	eugene3.00860035	hypothetical protein (705 aa)	•		•				•		0.480
	estExt_fgenesh4_pm.C_LG_IX0400	hypothetical protein (683 aa)	•		•		•		•		0.481
	fgenesh4_pm.C_LG_I001114	hypothetical protein (683 aa)	•		•		•		•		0.478
	fgenesh4_pg.C_scaffold_16170000001	Predicted protein (324 aa)	•		•				•		0.462
	gw1.V.2768.1	hypothetical protein (444 aa)	•		•				•		0.450

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	357
cd00446	137	cd00446, GrpE, GrpE is the adenine nucleotide exch	2e-56
pfam01025	165	pfam01025, GrpE, GrpE	5e-55
COG0576	193	COG0576, GrpE, Molecular chaperone GrpE (heat shoc	8e-47
PRK14141	209	PRK14141, PRK14141, heat shock protein GrpE; Provi	3e-44
PRK14140	191	PRK14140, PRK14140, heat shock protein GrpE; Provi	1e-34
PRK14150	193	PRK14150, PRK14150, heat shock protein GrpE; Provi	2e-34
PRK14155	208	PRK14155, PRK14155, heat shock protein GrpE; Provi	2e-31
PRK14139	185	PRK14139, PRK14139, heat shock protein GrpE; Provi	2e-29
PRK14151	176	PRK14151, PRK14151, heat shock protein GrpE; Provi	2e-26
PRK14153	194	PRK14153, PRK14153, heat shock protein GrpE; Provi	3e-23
PRK14161	178	PRK14161, PRK14161, heat shock protein GrpE; Provi	9e-22
PRK10325	197	PRK10325, PRK10325, heat shock protein GrpE; Provi	2e-21
PRK14144	199	PRK14144, PRK14144, heat shock protein GrpE; Provi	6e-21
PRK14149	191	PRK14149, PRK14149, heat shock protein GrpE; Provi	8e-21
PRK14158	194	PRK14158, PRK14158, heat shock protein GrpE; Provi	9e-21
PRK14148	195	PRK14148, PRK14148, heat shock protein GrpE; Provi	2e-20
PRK14162	194	PRK14162, PRK14162, heat shock protein GrpE; Provi	2e-20
PRK14160	211	PRK14160, PRK14160, heat shock protein GrpE; Provi	3e-19
PRK14147	172	PRK14147, PRK14147, heat shock protein GrpE; Provi	3e-19
PRK14156	177	PRK14156, PRK14156, heat shock protein GrpE; Provi	8e-18
PRK14143	238	PRK14143, PRK14143, heat shock protein GrpE; Provi	2e-17
PRK14159	176	PRK14159, PRK14159, heat shock protein GrpE; Provi	2e-14
PRK14154	208	PRK14154, PRK14154, heat shock protein GrpE; Provi	4e-14
PRK14145	196	PRK14145, PRK14145, heat shock protein GrpE; Provi	4e-13
PRK14146	215	PRK14146, PRK14146, heat shock protein GrpE; Provi	1e-12
PRK14157	227	PRK14157, PRK14157, heat shock protein GrpE; Provi	2e-11
PRK14163	214	PRK14163, PRK14163, heat shock protein GrpE; Provi	2e-09
PRK14142	223	PRK14142, PRK14142, heat shock protein GrpE; Provi	2e-04
PRK14164	218	PRK14164, PRK14164, heat shock protein GrpE; Provi	3e-04

>gnl|CDD|238252 cd00446, GrpE, GrpE is the adenine nucleotide exchange factor of DnaK (Hsp70)-type ATPases

 Score =  180 bits (458), Expect = 2e-56
 Identities = 72/150 (48%), Positives = 95/150 (63%), Gaps = 14/150 (9%)

Query: 193 KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLK 252
           ++++DK+LR+ AE EN + RT RE E ++K+AI+ FAK LL V DNL RA    K+    
Sbjct: 2   EELKDKLLRALAEFENYRKRTEREREEARKYAIEKFAKDLLPVLDNLERALEAAKKE--- 58

Query: 253 IDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPD 312
                        LK+L+EGVEMT KQL +V +K GVEK +P  EPFDP+ H A+ Q+P 
Sbjct: 59  -----------EELKNLVEGVEMTLKQLLDVLEKHGVEKIEPEGEPFDPNLHEAVMQVPS 107

Query: 313 NSKPPGTVAHVLKSGYTLYERVIRPAEVGV 342
               PGTV  VL+ GY L +RV+RPA V V
Sbjct: 108 PDVEPGTVVEVLQKGYKLGDRVLRPAMVVV 137

The GrpE dimer binds to the ATPase domain of Hsp70 catalyzing the dissociation of ADP, which enables rebinding of ATP, one step in the Hsp70 reaction cycle in protein folding. In eukaryotes, only the mitochondrial Hsp70, not the cytosolic form, is GrpE dependent. Length = 137

>gnl|CDD|216249 pfam01025, GrpE, GrpE

 Score =  177 bits (451), Expect = 5e-55
 Identities = 82/177 (46%), Positives = 111/177 (62%), Gaps = 14/177 (7%)

Query: 166 EIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAI 225
           E +   ++L    +  EE L    EE+++++D++LR  AE EN + RT RE E +KK+AI
Sbjct: 1   EEKEEEEELEDEEEALEEELEELEEEIEELKDRLLRLLAEFENYRKRTEREREEAKKYAI 60

Query: 226 QNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFK 285
           + FAK LL V DNL RA +  KEN                +KSL+EGVEM  KQL +V +
Sbjct: 61  EKFAKDLLPVLDNLERALAAAKEN--------------EDVKSLVEGVEMILKQLLKVLE 106

Query: 286 KFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGV 342
           K GVEK +P  EPFDP+ H A+ Q+P + KPPGTV  VL+ GY L++RV+RPA V V
Sbjct: 107 KHGVEKIEPEGEPFDPNLHEAVSQVPSDEKPPGTVVEVLQKGYKLHDRVLRPAMVVV 163

Length = 165

>gnl|CDD|223649 COG0576, GrpE, Molecular chaperone GrpE (heat shock protein) [Posttranslational modification, protein turnover, chaperones]

 Score =  157 bits (398), Expect = 8e-47
 Identities = 76/208 (36%), Positives = 110/208 (52%), Gaps = 17/208 (8%)

Query: 138 STVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQD 197
           S   Q  +       + A    + ++E E     ++ ++  ++    L A+ EE+K   D
Sbjct: 2   SDKEQKTEEPDAEETEEAEKSEEEEAEEEEPEE-ENELEEEQQEIAELEAQLEELK---D 57

Query: 198 KVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSN 257
           K LR+ AE EN++ RT RE E +KK+AI+ FAK LL V DNL RA    +++        
Sbjct: 58  KYLRAQAEFENLRKRTEREREEAKKYAIEKFAKDLLPVIDNLERALEAAEDD-------K 110

Query: 258 DTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPP 317
           D        K+LLEGVEMT  QL +  +K GVE+  P  E FDP+ H A+ ++      P
Sbjct: 111 DPE------KALLEGVEMTLDQLLDALEKLGVEEIGPEGEKFDPNLHEAVQRVESEDVEP 164

Query: 318 GTVAHVLKSGYTLYERVIRPAEVGVTQA 345
            TV  VL+ GY L +RV+RPA V V + 
Sbjct: 165 NTVVEVLQKGYKLNDRVLRPAMVKVAKK 192

Length = 193

>gnl|CDD|172630 PRK14141, PRK14141, heat shock protein GrpE; Provisional

 Score =  151 bits (383), Expect = 3e-44
 Identities = 73/180 (40%), Positives = 109/180 (60%), Gaps = 16/180 (8%)

Query: 183 ELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRA 242
           E L A+N E+K   D++LR  AEMEN++ RT R+  +++ + I  FA+ +L V+DNL RA
Sbjct: 41  EALKAENAELK---DRMLRLAAEMENLRKRTQRDVADARAYGIAGFARDMLSVSDNLRRA 97

Query: 243 SSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPH 302
              +        P+   A A   LK+L+EGVEMTE+ +    ++ GV+K DP  + FDP+
Sbjct: 98  LDAI--------PAEARAAADAGLKALIEGVEMTERAMLNALERHGVKKLDPEGQKFDPN 149

Query: 303 RHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ-----AVENDRAENNDQA 357
            H AMF++P+   P  TV  V+++GYT+ ERV+RPA VGV +     A E   + + D A
Sbjct: 150 FHQAMFEVPNPDVPNNTVVQVVQAGYTIGERVLRPAMVGVAKGGPKAAAEAGASTSEDDA 209

Length = 209

>gnl|CDD|237622 PRK14140, PRK14140, heat shock protein GrpE; Provisional

 Score =  125 bits (316), Expect = 1e-34
 Identities = 65/187 (34%), Positives = 97/187 (51%), Gaps = 17/187 (9%)

Query: 158 DSDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREA 217
           + + + E+  E S  +L+   + +   L AK +E++   ++ LR  A+ EN K R  +E 
Sbjct: 22  EDEVEEETVEEESEAELLDEEQAKIAELEAKLDELE---ERYLRLQADFENYKRRIQKEN 78

Query: 218 ENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTE 277
           E ++K+  Q+ A  LL   DN  RA        L+I+  ++        KSLL+GVEM  
Sbjct: 79  EAAEKYRAQSLASDLLPALDNFERA--------LQIEADDEQT------KSLLKGVEMVH 124

Query: 278 KQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRP 337
           +QL E  KK GVE  + + E FDP+ H A+ Q  D       V   L+ GY L +RVIRP
Sbjct: 125 RQLLEALKKEGVEVIEAVGEQFDPNLHQAVMQDEDEDFESNEVVEELQKGYKLKDRVIRP 184

Query: 338 AEVGVTQ 344
           + V V Q
Sbjct: 185 SMVKVNQ 191

Length = 191

>gnl|CDD|184539 PRK14150, PRK14150, heat shock protein GrpE; Provisional

 Score =  125 bits (315), Expect = 2e-34
 Identities = 65/163 (39%), Positives = 91/163 (55%), Gaps = 17/163 (10%)

Query: 182 EELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGR 241
            +L  A+ EE    +D VLR+ AE+EN++ R  ++ E + KFA++ FA  LL V DNL R
Sbjct: 48  AQLAEAQAEE----RDSVLRARAEVENIRRRAEQDVEKAHKFALEKFANELLPVIDNLER 103

Query: 242 ASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDP 301
           A           D  N+       LK+L+EGVE+T K L +   KFGVE   P+ EPF+P
Sbjct: 104 ALQA-------ADKENEA------LKALIEGVELTLKSLLDTVAKFGVEVVGPVGEPFNP 150

Query: 302 HRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ 344
             H A+         P TV  V++ GYTL  R++RPA V V++
Sbjct: 151 EVHQAISMQESEDHEPNTVMMVMQKGYTLNGRLLRPAMVMVSK 193

Length = 193

>gnl|CDD|237627 PRK14155, PRK14155, heat shock protein GrpE; Provisional

 Score =  117 bits (295), Expect = 2e-31
 Identities = 62/153 (40%), Positives = 90/153 (58%), Gaps = 12/153 (7%)

Query: 191 EMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENF 250
           E+  ++D+ LR  AE EN K R  RE  +++ +AIQ FA+ LL  ADNLGRA++   ++ 
Sbjct: 28  EVAALKDQALRYAAEAENTKRRAEREMNDARAYAIQKFARDLLGAADNLGRATAASPKD- 86

Query: 251 LKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDP-INEPFDPHRHNAMFQ 309
                      A P +K+ + GVEMTEK+L   F++ G++K DP   + FDPH H AM +
Sbjct: 87  ----------SADPAVKNFIIGVEMTEKELLGAFERNGLKKIDPAKGDKFDPHLHQAMME 136

Query: 310 LPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGV 342
            P      G V  V+++GY L  R++RPA V V
Sbjct: 137 QPSTEVAAGGVLQVMQAGYELMGRLVRPAMVAV 169

Length = 208

>gnl|CDD|237621 PRK14139, PRK14139, heat shock protein GrpE; Provisional

 Score =  111 bits (280), Expect = 2e-29
 Identities = 62/164 (37%), Positives = 90/164 (54%), Gaps = 17/164 (10%)

Query: 182 EELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGR 241
           E  L     +  ++QD  LR+ AE ENV+ R   +   + KFAI++FA++LL V D+L  
Sbjct: 38  EAELAEAEAKAAELQDSFLRAKAETENVRRRAQEDVAKAHKFAIESFAESLLPVKDSLEA 97

Query: 242 ASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDP 301
           A        L  +  +        L+ L EGVE+T KQL   F+K  V + +P+ E FDP
Sbjct: 98  A--------LADESGD--------LEKLREGVELTLKQLTSAFEKGRVVEINPVGEKFDP 141

Query: 302 HRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQA 345
           H+H A+  +P   + P TV  VL+ GYT+ +RV+RPA V V   
Sbjct: 142 HQHQAISMVPAE-QEPNTVVAVLQKGYTIADRVLRPALVTVAAP 184

Length = 185

>gnl|CDD|172640 PRK14151, PRK14151, heat shock protein GrpE; Provisional

 Score =  103 bits (258), Expect = 2e-26
 Identities = 54/157 (34%), Positives = 87/157 (55%), Gaps = 13/157 (8%)

Query: 189 NEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKE 248
            E++   +D+ LR+ A+++NV+ R  ++ E + KFA++ FA  LL V D+L R       
Sbjct: 33  EEQLAAAKDQSLRAAADLQNVRRRAEQDVEKAHKFALEKFAGDLLPVVDSLERG------ 86

Query: 249 NFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMF 308
             L++  ++D A     +K + EGVE+T K   +  K++ +E  DP  EPF+P  H AM 
Sbjct: 87  --LELSSADDEA-----IKPMREGVELTLKMFQDTLKRYQLEAVDPHGEPFNPEHHQAMA 139

Query: 309 QLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQA 345
                   P +V  V + GY L  R++RPA V V++A
Sbjct: 140 MQESADVEPNSVLKVFQKGYLLNGRLLRPAMVVVSKA 176

Length = 176

>gnl|CDD|184540 PRK14153, PRK14153, heat shock protein GrpE; Provisional

 Score = 94.9 bits (236), Expect = 3e-23
 Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 15/201 (7%)

Query: 150 VSKQTAFSDSDSDSESEIELSRDDLVKLLKEREELLMAK-NEEMKQMQDKVLRSFAEMEN 208
           V K  A +    +S S  E + +   +      +    K  EE++ +++++ R  AE +N
Sbjct: 6   VGKDKAENSEARNSGSSAEEAEELKEEPEDSTADSETEKCREEIESLKEQLFRLAAEFDN 65

Query: 209 VKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKS 268
            + RT RE E ++KF ++     LL+V DN  RA    +        + D         S
Sbjct: 66  FRKRTAREMEENRKFVLEQVLLDLLEVTDNFERALESART-------AEDMN-------S 111

Query: 269 LLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGY 328
           ++EG+EM  KQ   + +K+G+E+ +   E FDPHRH AM  +  +  P  T+  V K GY
Sbjct: 112 IVEGIEMVSKQFFSILEKYGLERIECEGEEFDPHRHEAMMHVETSEVPDNTIVDVCKPGY 171

Query: 329 TLYERVIRPAEVGVTQAVEND 349
            L  +VIRPA V V +  + +
Sbjct: 172 ALNSKVIRPAMVSVARNPDEE 192

Length = 194

>gnl|CDD|237630 PRK14161, PRK14161, heat shock protein GrpE; Provisional

 Score = 90.8 bits (225), Expect = 9e-22
 Identities = 58/188 (30%), Positives = 106/188 (56%), Gaps = 16/188 (8%)

Query: 158 DSDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREA 217
           D+  ++E  I    +++V+      E+   K  E+++++DK++R+ AE++N + R  +  
Sbjct: 4   DNIENNEQTINDIAEEIVE--TANPEITALK-AEIEELKDKLIRTTAEIDNTRKRLEKAR 60

Query: 218 ENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTE 277
           + +K +AI  FAK LL+V+DNL RA        L   P+N          +++ GV+MT+
Sbjct: 61  DEAKDYAIATFAKELLNVSDNLSRA--------LAHKPANSDVEVT----NIIAGVQMTK 108

Query: 278 KQLGEVFKKFGVEKFDP-INEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIR 336
            +L +VF K  +E+  P I   FD + HNA+ Q+      P ++  +++SGY + +R++R
Sbjct: 109 DELDKVFHKHHIEEIKPEIGSMFDYNLHNAISQIEHPDHAPNSIITLMQSGYKIRDRLLR 168

Query: 337 PAEVGVTQ 344
           PA V V +
Sbjct: 169 PATVQVVK 176

Length = 178

>gnl|CDD|182379 PRK10325, PRK10325, heat shock protein GrpE; Provisional

 Score = 90.5 bits (224), Expect = 2e-21
 Identities = 63/186 (33%), Positives = 98/186 (52%), Gaps = 19/186 (10%)

Query: 160 DSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAEN 219
           + ++ +E    RD+  K+     +L  A+  E    +D +LR  AEMEN++ RT  + E 
Sbjct: 29  EPEASAEQVDPRDE--KIANLEAQLAEAQTRE----RDGILRVKAEMENLRRRTELDIEK 82

Query: 220 SKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQ 279
           + KFA++ F   LL V D+L RA  V  +             A P + +++EG+E+T K 
Sbjct: 83  AHKFALEKFINELLPVIDSLDRALEVADK-------------ANPDMSAMVEGIELTLKS 129

Query: 280 LGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAE 339
           + +V +KFGVE     N P DP+ H A+  +  +   PG V  +++ GYTL  R IR A 
Sbjct: 130 MLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTLNGRTIRAAM 189

Query: 340 VGVTQA 345
           V V +A
Sbjct: 190 VTVAKA 195

Length = 197

>gnl|CDD|184535 PRK14144, PRK14144, heat shock protein GrpE; Provisional

 Score = 89.0 bits (220), Expect = 6e-21
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 15/165 (9%)

Query: 180 EREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNL 239
             EE L    ++  +  +K +R+ AE+ENV+ R  RE  N+ K+ ++    ALL V D+L
Sbjct: 49  ALEEQLTLAEQKAHENWEKSVRALAELENVRRRMEREVANAHKYGVEKLISALLPVVDSL 108

Query: 240 GRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPF 299
            +A  +  +N    DPS            + EG+E+T K   +  +KF VE+ DP+ + F
Sbjct: 109 EQALQLADKN---SDPS------------MHEGLELTMKLFLDALQKFDVEQIDPLGQTF 153

Query: 300 DPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ 344
           DP +H AM   P    PP +V  V + GY L +RVIRPA V V+ 
Sbjct: 154 DPQQHEAMSMQPAPGAPPNSVITVFQKGYKLSDRVIRPARVIVST 198

Length = 199

>gnl|CDD|184538 PRK14149, PRK14149, heat shock protein GrpE; Provisional

 Score = 88.4 bits (219), Expect = 8e-21
 Identities = 56/170 (32%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 180 EREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNL 239
           E +E    K +EM    +K LR  A+ ENVK R  R+   + ++A +  A  LL V D L
Sbjct: 43  EIKEDFELKYKEMH---EKYLRVHADFENVKKRLERDKSMALEYAYEKIALDLLPVIDAL 99

Query: 240 GRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPF 299
             A                +A  V    +L +G+E+T ++L EV  + G+E      E F
Sbjct: 100 LGA--------------LKSAAEVDKESALTKGLELTMEKLHEVLARHGIEGI-ECLEEF 144

Query: 300 DPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVEND 349
           DP+ HNA+ Q+    K  G +  VL+ GY    RV+RPA V +    +ND
Sbjct: 145 DPNFHNAIMQVKSEEKENGKIVQVLQQGYKYKGRVLRPAMVSI---AKND 191

Length = 191

>gnl|CDD|172646 PRK14158, PRK14158, heat shock protein GrpE; Provisional

 Score = 88.4 bits (219), Expect = 9e-21
 Identities = 57/166 (34%), Positives = 83/166 (50%), Gaps = 16/166 (9%)

Query: 178 LKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVAD 237
           +KE EE L AK  E     DK LR  A++EN + R  +E E   K+  ++    +L   D
Sbjct: 42  IKELEEALAAKEAEAAANWDKYLRERADLENYRKRVQKEKEELLKYGNESLILEILPAVD 101

Query: 238 NLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFD-PIN 296
           N+ RA          +D +++ +     + +++EG+ MT   L    KKFGV   +    
Sbjct: 102 NMERA----------LDHADEES-----MSAIIEGIRMTLSMLLSTLKKFGVTPVEAEKG 146

Query: 297 EPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGV 342
            PFDP  H AM Q+    + P TV  V + GY L ER++RPA V V
Sbjct: 147 TPFDPAYHQAMCQVESAEQEPNTVVAVFQKGYLLNERLLRPAMVSV 192

Length = 194

>gnl|CDD|172637 PRK14148, PRK14148, heat shock protein GrpE; Provisional

 Score = 87.5 bits (216), Expect = 2e-20
 Identities = 65/194 (33%), Positives = 107/194 (55%), Gaps = 23/194 (11%)

Query: 160 DSDSESEIELSRDDLVKLLKE---REELLMAKN------EEMKQMQDKVLRSFAEMENVK 210
           D ++ +++E +++     L+E    E+L  AK+      +   Q +D+ LR+ AEMEN++
Sbjct: 15  DIETAAQVETAQESASGALEELSVEEQLERAKDTIKELEDSCDQFKDEALRAKAEMENIR 74

Query: 211 DRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLL 270
            R  R+  N++KF I+ FAK LL V D++ +A        LK +   + A A+       
Sbjct: 75  KRAERDVSNARKFGIEKFAKELLPVIDSIEQA--------LKHEVKLEEAIAMK------ 120

Query: 271 EGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTL 330
           EG+E+T K L ++ KK GVE+ DP  E FDP+ H AM  +P+      T+  V + GY L
Sbjct: 121 EGIELTAKMLVDILKKNGVEELDPKGEKFDPNLHEAMAMIPNPEFEDNTIFDVFQKGYML 180

Query: 331 YERVIRPAEVGVTQ 344
             R++R A+V + +
Sbjct: 181 NGRIVRAAKVVIVK 194

Length = 195

>gnl|CDD|237631 PRK14162, PRK14162, heat shock protein GrpE; Provisional

 Score = 87.2 bits (216), Expect = 2e-20
 Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 19/209 (9%)

Query: 137 QSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQ 196
           +   S+ +  +   + +    ++    + E +  ++ +  L KE  +L  AKN   K ++
Sbjct: 4   EEFPSEKDLPQEETTDEAPKKEAKEAPKEEDQEKQNPVEDLEKEIADL-KAKN---KDLE 59

Query: 197 DKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPS 256
           DK LRS AE++N+++R  +E     K+  Q+ AK +L   DNL RA +V          +
Sbjct: 60  DKYLRSQAEIQNMQNRYAKERAQLIKYESQSLAKDVLPAMDNLERALAV---------KA 110

Query: 257 NDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLP-DNSK 315
           +D A      K L +GV+MT   L +  K  GV +     E FDP  H A+  +  +N  
Sbjct: 111 DDEAA-----KQLKKGVQMTLDHLVKALKDHGVTEIKADGEKFDPTLHQAVQTVAAENDD 165

Query: 316 PPGTVAHVLKSGYTLYERVIRPAEVGVTQ 344
               V  VL+ GY   +R +RPA V V Q
Sbjct: 166 QKDHVVQVLQKGYQYKDRTLRPAMVVVAQ 194

Length = 194

>gnl|CDD|237629 PRK14160, PRK14160, heat shock protein GrpE; Provisional

 Score = 84.8 bits (210), Expect = 3e-19
 Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 22/227 (9%)

Query: 117 SDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDDLVK 176
            D   E  +       ++K +    + +     + K+    DS+  +E +IE  +D+  K
Sbjct: 6   KDAKHENMEEDCCKENENKEEDKGKEEDLEFEEIEKEEIIEDSEESNEVKIEELKDENNK 65

Query: 177 LLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVA 236
           L +E ++L      E++ ++D++LR+ AE +N + RT +E E     A ++  K LL V 
Sbjct: 66  LKEENKKL----ENELEALKDRLLRTVAEYDNYRKRTAKEKEGIYSDACEDVLKELLPVL 121

Query: 237 DNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPIN 296
           DNL RA++V               G+V  LK   +G+EMT KQ     +K GVE+     
Sbjct: 122 DNLERAAAV--------------EGSVEDLK---KGIEMTVKQFKTSLEKLGVEEISTEG 164

Query: 297 EPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVT 343
           E FDP+ HNA+  + D +     +  V + GY   ++VIR + V V 
Sbjct: 165 E-FDPNLHNAVMHVEDENYGENEIVEVFQKGYKRGDKVIRYSMVKVA 210

Length = 211

>gnl|CDD|237625 PRK14147, PRK14147, heat shock protein GrpE; Provisional

 Score = 83.8 bits (207), Expect = 3e-19
 Identities = 52/154 (33%), Positives = 76/154 (49%), Gaps = 16/154 (10%)

Query: 191 EMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENF 250
           E+  ++   LR  A++EN + R  R+ E ++KFA +     LL V D+L           
Sbjct: 33  EIALVKADALRERADLENQRKRIARDVEQARKFANEKLLGELLPVFDSL----------- 81

Query: 251 LKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQL 310
              D     AG  P    L +G+E+T KQL +V    G+   DP+ +PF+P  H A+ Q 
Sbjct: 82  ---DAGLTAAGTEP--SPLRDGLELTYKQLLKVAADNGLTLLDPVGQPFNPEHHQAISQG 136

Query: 311 PDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ 344
                 PG V  V + GY L ER++RPA V V +
Sbjct: 137 EAEGVAPGHVVQVFQKGYLLNERLLRPALVVVAK 170

Length = 172

>gnl|CDD|237628 PRK14156, PRK14156, heat shock protein GrpE; Provisional

 Score = 79.9 bits (197), Expect = 8e-18
 Identities = 58/182 (31%), Positives = 98/182 (53%), Gaps = 21/182 (11%)

Query: 164 ESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKF 223
            +E E + +++V+   E+ EL +A NE   + ++K LR+ AEM+N++ R   E +  +++
Sbjct: 16  ATETEETVEEVVEETPEKSELELA-NERADEFENKYLRAHAEMQNIQRRANEERQQLQRY 74

Query: 224 AIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEV 283
             Q+ AKA+L   DNL RA +V                   L   + +G+EM ++ L + 
Sbjct: 75  RSQDLAKAILPSLDNLERALAVEG-----------------LTDDVKKGLEMVQESLIQA 117

Query: 284 FKKFGVEKFDPINEPFDPHRHNAMFQLP-DNSKPPGTVAHVLKSGYTLYERVIRPAEVGV 342
            K+ GVE+     + FD + H A+  LP D+  P  ++A V + GY L+ER++RPA V V
Sbjct: 118 LKEEGVEEVAV--DSFDHNLHMAVQTLPADDEHPADSIAQVFQKGYKLHERLLRPAMVVV 175

Query: 343 TQ 344
             
Sbjct: 176 YN 177

Length = 177

>gnl|CDD|237624 PRK14143, PRK14143, heat shock protein GrpE; Provisional

 Score = 80.2 bits (198), Expect = 2e-17
 Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 15/250 (6%)

Query: 108 PKPNGDAKASDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEI 167
             P  D       + +    +++  +S  + T  ++           A S  DS S +  
Sbjct: 1   STPEQDPLEVKLAVISESEAEDNSPESSEEVTEQEAELTNPEGDAAEAESSPDSGSAASE 60

Query: 168 ELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQN 227
             +  D    L + E+ L +  +E++++  + +R  A+ +N + RT RE E+ +     N
Sbjct: 61  TAA--DNAARLAQLEQELESLKQELEELNSQYMRIAADFDNFRKRTSREQEDLRLQLKCN 118

Query: 228 FAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKF 287
               +L V DN  RA         ++ P  + A A  L +S  +G+    KQL +V K+ 
Sbjct: 119 TLSEILPVVDNFERARQ-------QLKPEGEEAQA--LHRSY-QGLY---KQLVDVLKRL 165

Query: 288 GVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVE 347
           GV     + + FDP+ H A+ + P +  P   V   L+ GY L  RV+R A V V+    
Sbjct: 166 GVSPMRVVGQEFDPNLHEAVLREPSDEHPEDVVLEELQRGYHLGGRVLRHAMVKVSMGPG 225

Query: 348 NDRAENNDQA 357
                  DQA
Sbjct: 226 PSSPAEEDQA 235

Length = 238

>gnl|CDD|172647 PRK14159, PRK14159, heat shock protein GrpE; Provisional

 Score = 70.1 bits (171), Expect = 2e-14
 Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 18/185 (9%)

Query: 160 DSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAEN 219
           + ++E+   L  ++L  +    +  L    +E+K   DK +R+ AE EN+K R  +E  +
Sbjct: 10  NENAENSEHLQDENLQNIEDVEQNKLQKDYDELK---DKYMRANAEFENIKKRMEKEKLS 66

Query: 220 SKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQ 279
           +  +A ++FAK LLDV D L  A +V   + + +               + EGV+ T   
Sbjct: 67  AMAYANESFAKDLLDVLDALEAAVNVECHDEISL--------------KIKEGVQNTLDL 112

Query: 280 LGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAE 339
             +  +K GV       E FDP+ H AMF +   +   G V  VL+ GY + +RVIRP +
Sbjct: 113 FLKKLEKHGVALIKEEKE-FDPNLHEAMFHVDSENHQSGEVVQVLQKGYKIADRVIRPTK 171

Query: 340 VGVTQ 344
           V V +
Sbjct: 172 VSVAK 176

Length = 176

>gnl|CDD|237626 PRK14154, PRK14154, heat shock protein GrpE; Provisional

 Score = 70.2 bits (171), Expect = 4e-14
 Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 15/211 (7%)

Query: 134 SKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDDLVKLLKEREELLMAKNE-EM 192
           + P+S     NK  + +  +    +   D   E+E  R+ L    +E+ E  + + E ++
Sbjct: 9   NNPESETKAKNKWEKVMEAEEEQEEGGGDGSQEMEPHREGLEFPSREKLEGQLTRMERKV 68

Query: 193 KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLK 252
            + + + LR+ AEM+N++ R  RE  +  KF  +     LL VAD+L             
Sbjct: 69  DEYKTQYLRAQAEMDNLRKRIEREKADIIKFGSKQLITDLLPVADSL------------- 115

Query: 253 IDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDP-INEPFDPHRHNAMFQLP 311
           I      A   P +KS+ +G+ +T   L     K GV+  +P   +PFDP  H AM    
Sbjct: 116 IHGLESPASEDPQVKSMRDGMSLTLDLLHNTLAKHGVQVINPNPGDPFDPALHEAMSVQA 175

Query: 312 DNSKPPGTVAHVLKSGYTLYERVIRPAEVGV 342
                P T+  VL+ GY L  RV+R A V V
Sbjct: 176 VPDAKPDTIIQVLQKGYQLNGRVLRAARVIV 206

Length = 208

>gnl|CDD|184536 PRK14145, PRK14145, heat shock protein GrpE; Provisional

 Score = 66.9 bits (163), Expect = 4e-13
 Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 17/203 (8%)

Query: 142 QSNKRRRRVSKQTAFSDSDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLR 201
           +  K    +S          D +++    +   V  ++E ++ L  K  E ++  D   R
Sbjct: 11  EEEKDVNNLSSNEQMEGPPEDEQAQQNQPQQQTVDEIEELKQKLQQKEVEAQEYLDIAQR 70

Query: 202 SFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAG 261
             AE EN + RT +E     ++  +     LL V DN  RA +   +             
Sbjct: 71  LKAEFENYRKRTEKEKSEMVEYGKEQVILELLPVMDNFERALASSGDY------------ 118

Query: 262 AVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVA 321
                 SL EG+E+  +Q  ++  KFGV++ +   + FDP++H+A+ Q     K P  + 
Sbjct: 119 -----NSLKEGIELIYRQFKKILDKFGVKEIEAEGQIFDPYKHHAVMQEEVEGKQPNEII 173

Query: 322 HVLKSGYTLYERVIRPAEVGVTQ 344
            V + GY L ++VIRP+ V V +
Sbjct: 174 EVFQKGYYLKDKVIRPSLVKVAK 196

Length = 196

>gnl|CDD|172635 PRK14146, PRK14146, heat shock protein GrpE; Provisional

 Score = 65.9 bits (160), Expect = 1e-12
 Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 19/224 (8%)

Query: 123 ATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDDLVKLLKERE 182
           A     ++  ++K     SQS        +     +S + +E   E + +        ++
Sbjct: 2   AETSNNKTSEEAKANEKKSQSQTLEESKLENMNSEESQTITEETQEQAVEGAETETSLQK 61

Query: 183 ELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRA 242
           EL  AK +E++ ++D   R  AE +N K R+ +E  + +K A+++     L+  DNL R 
Sbjct: 62  ELDNAK-KEIESLKDSWARERAEFQNFKRRSAQEFVSIRKEAVKSLVSGFLNPIDNLERV 120

Query: 243 SSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPH 302
            +           +         LK  +EGV+M  K+   V +K  V +FDP  EPFDP 
Sbjct: 121 GAT---------QNQS-----EELKPFVEGVKMILKEFYSVLEKSNVIRFDPKGEPFDPM 166

Query: 303 RHNAMFQLPDNSKPPGTVAHVLKSGYTLYE----RVIRPAEVGV 342
              A+     +     TV  V ++GY   E      +RPA V +
Sbjct: 167 SMEALSSEEGDQYSEETVIDVYQAGYYYKENEDKFTLRPARVRI 210

Length = 215

>gnl|CDD|184543 PRK14157, PRK14157, heat shock protein GrpE; Provisional

 Score = 62.3 bits (151), Expect = 2e-11
 Identities = 65/249 (26%), Positives = 107/249 (42%), Gaps = 39/249 (15%)

Query: 95  DAKDSVDNNGAEAPKPNGD-AKASDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQ 153
           D  D+ D             A AS E  E  D   ++  ++   +  + +    +  +++
Sbjct: 12  DLPDADDLEAQGQAAQASSGADASAESGEQQDSAAQADANAGADAAPAAAEGEAKAAAEK 71

Query: 154 TAFSDSDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRT 213
           T  + SDSD       +   L +  KE  E L A           + R  AE  N ++RT
Sbjct: 72  TGEAQSDSDD------TLTPLGQAKKEAAEYLEA-----------LQRERAEFINYRNRT 114

Query: 214 IREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGV 273
            +E +  ++  I +   ALL   D++ R    ++E+       +D+  AV          
Sbjct: 115 QKEQDRFRQHGIIDVLTALLPALDDIDR----IREH----SEMDDSFKAV---------- 156

Query: 274 EMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYER 333
                ++ + F+KFGVEKF    E FDP +H+A+   PD      TV  V+++GY + +R
Sbjct: 157 ---AAKIDKAFEKFGVEKFGEKGEDFDPTKHDAILHKPDPDAEKETVDTVVEAGYRIGDR 213

Query: 334 VIRPAEVGV 342
           VIR A V V
Sbjct: 214 VIRAARVVV 222

Length = 227

>gnl|CDD|184546 PRK14163, PRK14163, heat shock protein GrpE; Provisional

 Score = 56.7 bits (136), Expect = 2e-09
 Identities = 58/216 (26%), Positives = 92/216 (42%), Gaps = 37/216 (17%)

Query: 131 GFDSKPQ--STVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDDLVKLLKEREELLMAK 188
           GF+ KP   S  +  +   +  S++ A    D+ + + +    D +   L ER       
Sbjct: 7   GFEEKPDVPSGATPDDAEPKAASEEGAAPAGDAAATAGLTAQLDQVRTALGER------- 59

Query: 189 NEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKE 248
             +++++Q       AE +N + R  R+    K+ A+ N    LL V D++GRA      
Sbjct: 60  TADLQRLQ-------AEYQNYRRRVERDRVTVKEIAVANLLSELLPVLDDVGRA------ 106

Query: 249 NFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMF 308
                    +    V   KS+ E +E T  +LG   ++FG E      EPFDP  H A+ 
Sbjct: 107 --------REHGELVGGFKSVAESLETTVAKLG--LQQFGKE-----GEPFDPTIHEALM 151

Query: 309 QLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ 344
                     T   +L+ GY + ER IRPA V V +
Sbjct: 152 HSYAPDVTETTCVAILQPGYRIGERTIRPARVAVAE 187

Length = 214

>gnl|CDD|237623 PRK14142, PRK14142, heat shock protein GrpE; Provisional

 Score = 41.9 bits (98), Expect = 2e-04
 Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 25/169 (14%)

Query: 187 AKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVV 246
              +++ ++   + R  A+  N + R +R+ + +   A  +    LL V D+L RA    
Sbjct: 44  HTEDKVAELTADLQRVQADFANYRKRALRDQQAAADRAKASVVSQLLGVLDDLERAR--- 100

Query: 247 KENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNA 306
           K   L+  P          LKS+ + ++     LG V   FG E      E FDP  H A
Sbjct: 101 KHGDLESGP----------LKSVADKLDSALTGLGLV--AFGAE-----GEDFDPVLHEA 143

Query: 307 MFQLPDN---SKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAVENDRAE 352
           +    D    SKP   +  V++ GY L E+V+R A VGV   V  D AE
Sbjct: 144 VQHEGDGGQGSKP--VIGTVMRQGYQLGEQVLRHALVGVVDTVVVDAAE 190

Length = 223

>gnl|CDD|237632 PRK14164, PRK14164, heat shock protein GrpE; Provisional

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 57/238 (23%), Positives = 95/238 (39%), Gaps = 28/238 (11%)

Query: 103 NGAEAPKPNGDAKASDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSD 162
                P   GD + +D    + DR + +  ++     V + +             + D D
Sbjct: 3   TSNGMPDNPGDPENTDPEATSADRAEAAAEEAALAQGVPEDD-----PFGDAVEGEIDPD 57

Query: 163 SESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKK 222
            E+++E   DD+   L +  E    +  ++ +  + + R  AE  N + RT RE +   +
Sbjct: 58  LEADLEDLLDDVDPELADDGEASTVE-AQLAERTEDLQRVTAEYANYRRRTERERQAIIE 116

Query: 223 FAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGE 282
            A    A  LL + D+L  A    +   L   P          LK+       ++K L  
Sbjct: 117 TAKAGVATDLLPILDDLDLAE---QHGDLNEGP----------LKA------FSDK-LTN 156

Query: 283 VFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEV 340
           V     VEKF    + FDP  H A+  L  +S     +  VL+ GY + +RV+R A V
Sbjct: 157 VLAGLKVEKFGEEGDAFDPEIHEAVQDL--SSGDEKVLGTVLRKGYRMGDRVLRTAMV 212

Length = 218

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	357
PRK14143	238	heat shock protein GrpE; Provisional	100.0
PRK14148	195	heat shock protein GrpE; Provisional	100.0
PRK14161	178	heat shock protein GrpE; Provisional	100.0
PRK14153	194	heat shock protein GrpE; Provisional	100.0
PRK14141	209	heat shock protein GrpE; Provisional	100.0
PRK14151	176	heat shock protein GrpE; Provisional	100.0
PRK14147	172	heat shock protein GrpE; Provisional	100.0
PRK14155	208	heat shock protein GrpE; Provisional	100.0
PRK14145	196	heat shock protein GrpE; Provisional	100.0
PRK14158	194	heat shock protein GrpE; Provisional	100.0
PRK14163	214	heat shock protein GrpE; Provisional	100.0
PRK14140	191	heat shock protein GrpE; Provisional	100.0
PRK14162	194	heat shock protein GrpE; Provisional	100.0
PRK14139	185	heat shock protein GrpE; Provisional	100.0
PRK14160	211	heat shock protein GrpE; Provisional	100.0
PRK14150	193	heat shock protein GrpE; Provisional	100.0
PRK14144	199	heat shock protein GrpE; Provisional	100.0
COG0576	193	GrpE Molecular chaperone GrpE (heat shock protein)	100.0
PRK14146	215	heat shock protein GrpE; Provisional	100.0
PRK14159	176	heat shock protein GrpE; Provisional	100.0
PRK14154	208	heat shock protein GrpE; Provisional	100.0
PRK10325	197	heat shock protein GrpE; Provisional	100.0
PRK14149	191	heat shock protein GrpE; Provisional	100.0
PRK14157	227	heat shock protein GrpE; Provisional	100.0
KOG3003	236	consensus Molecular chaperone of the GrpE family [	100.0
PRK14156	177	heat shock protein GrpE; Provisional	100.0
PRK14142	223	heat shock protein GrpE; Provisional	100.0
PRK14164	218	heat shock protein GrpE; Provisional	100.0
cd00446	137	GrpE GrpE is the adenine nucleotide exchange facto	100.0
PF01025	165	GrpE: GrpE; InterPro: IPR000740 Molecular chaperon	100.0
PF06156	107	DUF972: Protein of unknown function (DUF972); Inte	83.25

>PRK14143 heat shock protein GrpE; Provisional

Probab=100.00  E-value=2e-46  Score=352.71  Aligned_cols=164  Identities=28%  Similarity=0.395  Sum_probs=148.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCC
Q 018372          176 KLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDP  255 (357)
Q Consensus       176 klv~e~ee~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~  255 (357)
                      +.+..+++.++.+++++++++++|+|++|||+|||||+.||++++++||+++|+++||||+|||+||+.++...      
T Consensus        67 ~~~~~l~~el~~l~~e~~elkd~~lR~~AdfeN~RKR~~kE~e~~~~~a~~~~~~~lLpV~DnLerAl~~~~~~------  140 (238)
T PRK14143         67 ARLAQLEQELESLKQELEELNSQYMRIAADFDNFRKRTSREQEDLRLQLKCNTLSEILPVVDNFERARQQLKPE------  140 (238)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhccccc------
Confidence            33455566677888999999999999999999999999999999999999999999999999999999865321      


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEee
Q 018372          256 SNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVI  335 (357)
Q Consensus       256 s~d~a~~n~~lksl~eGVeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVL  335 (357)
                             ......|.+||+||+++|.++|+++||++|+++|++|||++|+||++++++++++|||++|+|+||+||||||
T Consensus       141 -------~~~~~~l~~Gve~i~k~l~~~L~k~GV~~i~~~G~~FDP~~HEAv~~~~~~~~~~gtVv~v~qkGY~l~~RVL  213 (238)
T PRK14143        141 -------GEEAQALHRSYQGLYKQLVDVLKRLGVSPMRVVGQEFDPNLHEAVLREPSDEHPEDVVLEELQRGYHLGGRVL  213 (238)
T ss_pred             -------chhHHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCCCChHHhheeeeecCCCCCcCeEEEEeeCCceeCCEec
Confidence                   0123679999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eecEEEeecCCCCcccc
Q 018372          336 RPAEVGVTQAVENDRAE  352 (357)
Q Consensus       336 RPA~VvVsK~~e~~~~~  352 (357)
                      |||+|+|++++....++
T Consensus       214 RpA~V~Vsk~~~~~~~~  230 (238)
T PRK14143        214 RHAMVKVSMGPGPSSPA  230 (238)
T ss_pred             ccceEEECCCCCCCCCC
Confidence            99999999988755543

>PRK14148 heat shock protein GrpE; Provisional

Probab=100.00  E-value=2e-46  Score=343.86  Aligned_cols=156  Identities=35%  Similarity=0.567  Sum_probs=144.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCC
Q 018372          176 KLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDP  255 (357)
Q Consensus       176 klv~e~ee~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~  255 (357)
                      +.+..+++.++.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+.+.       
T Consensus        40 ~e~~~l~~~l~~l~~e~~elkd~~lR~~Ae~eN~rKR~~rE~e~~~~~a~~~~~~~LLpV~DnlerAl~~~~~-------  112 (195)
T PRK14148         40 EQLERAKDTIKELEDSCDQFKDEALRAKAEMENIRKRAERDVSNARKFGIEKFAKELLPVIDSIEQALKHEVK-------  112 (195)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccc-------
Confidence            4455566778888999999999999999999999999999999999999999999999999999999986432       


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEee
Q 018372          256 SNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVI  335 (357)
Q Consensus       256 s~d~a~~n~~lksl~eGVeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVL  335 (357)
                             .....+|++||+||+++|.++|+++||++|+|+|++|||++|+||++++++++++|+|++|+|+||+||||||
T Consensus       113 -------~~~~~~l~~Gv~mi~k~l~~vL~k~Gv~~I~~~G~~FDP~~HEAv~~~~~~~~~~gtVv~V~qkGY~l~dRVL  185 (195)
T PRK14148        113 -------LEEAIAMKEGIELTAKMLVDILKKNGVEELDPKGEKFDPNLHEAMAMIPNPEFEDNTIFDVFQKGYMLNGRIV  185 (195)
T ss_pred             -------chhHHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCChhHhheeeeeCCCCCCcCEEEEEeeCCcEeCCEee
Confidence                   0124689999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eecEEEeecC
Q 018372          336 RPAEVGVTQA  345 (357)
Q Consensus       336 RPA~VvVsK~  345 (357)
                      |||+|+|++.
T Consensus       186 RpA~V~Vak~  195 (195)
T PRK14148        186 RAAKVVIVKN  195 (195)
T ss_pred             eccEEEeCCC
Confidence            9999999873

>PRK14161 heat shock protein GrpE; Provisional

Probab=100.00  E-value=3e-46  Score=338.42  Aligned_cols=160  Identities=32%  Similarity=0.575  Sum_probs=146.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCC
Q 018372          175 VKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKID  254 (357)
Q Consensus       175 ~klv~e~ee~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d  254 (357)
                      .+.++..++.++.+++++++++++|+|++|||+|||||+++|++++++||+++|+++||||+|||+||+.+.+.+     
T Consensus        18 ~~~~~~~~~ei~~l~~e~~elkd~~lR~~AefeN~rkR~~ke~~~~~~~a~~~~~~~LLpv~DnlerAl~~~~~~-----   92 (178)
T PRK14161         18 EEIVETANPEITALKAEIEELKDKLIRTTAEIDNTRKRLEKARDEAKDYAIATFAKELLNVSDNLSRALAHKPAN-----   92 (178)
T ss_pred             HhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcCccc-----
Confidence            355677777888999999999999999999999999999999999999999999999999999999999875421     


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCC-CCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCE
Q 018372          255 PSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDP-INEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYER  333 (357)
Q Consensus       255 ~s~d~a~~n~~lksl~eGVeMi~kqL~~vL~k~GVe~Iep-vGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dR  333 (357)
                             .+..+.++++||+||+++|.++|+++||++|+| +|++|||++||||++++++++++|||++|+|+||+||||
T Consensus        93 -------~~~~~~~~~~Gv~mi~k~l~~vL~~~Gv~~I~~~~G~~FDP~~HEAv~~~~~~~~~~gtVi~v~q~GY~l~dR  165 (178)
T PRK14161         93 -------SDVEVTNIIAGVQMTKDELDKVFHKHHIEEIKPEIGSMFDYNLHNAISQIEHPDHAPNSIITLMQSGYKIRDR  165 (178)
T ss_pred             -------cchhHHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCCCChHHhhhheeeCCCCCCcCEEEEEeeCCcEeCCE
Confidence                   112357899999999999999999999999999 699999999999999999999999999999999999999


Q ss_pred             eeeecEEEeecCC
Q 018372          334 VIRPAEVGVTQAV  346 (357)
Q Consensus       334 VLRPA~VvVsK~~  346 (357)
                      |||||+|+|+++|
T Consensus       166 VLRpA~V~Vak~~  178 (178)
T PRK14161        166 LLRPATVQVVKKP  178 (178)
T ss_pred             eecCceEEeCCCC
Confidence            9999999999864

>PRK14153 heat shock protein GrpE; Provisional

Probab=100.00  E-value=4.6e-46  Score=341.12  Aligned_cols=157  Identities=34%  Similarity=0.583  Sum_probs=144.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCCCC
Q 018372          178 LKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSN  257 (357)
Q Consensus       178 v~e~ee~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~s~  257 (357)
                      +......+..+++++++++++|+|++|||+|||||+++|++++++||+++|+++||||+|+|+||+++.+.         
T Consensus        35 ~~~~~~ei~~l~~e~~elkd~~lR~~AEfeN~rKR~~kE~e~~~~~a~~~~~~~LLpv~DnLerAl~~~~~---------  105 (194)
T PRK14153         35 DSTADSETEKCREEIESLKEQLFRLAAEFDNFRKRTAREMEENRKFVLEQVLLDLLEVTDNFERALESART---------  105 (194)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccc---------
Confidence            34445566778899999999999999999999999999999999999999999999999999999986532         


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEeeee
Q 018372          258 DTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRP  337 (357)
Q Consensus       258 d~a~~n~~lksl~eGVeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVLRP  337 (357)
                           +..+.+|++||+||+++|.++|+++||++|+|+|++|||++|+||++++++++++|||++|+|+||+|+||||||
T Consensus       106 -----~~~~~~l~~Gvemi~k~~~~vL~k~Gv~~I~~~G~~FDP~~HEAv~~~~~~~~~~gtVi~V~qkGY~l~dRVLRP  180 (194)
T PRK14153        106 -----AEDMNSIVEGIEMVSKQFFSILEKYGLERIECEGEEFDPHRHEAMMHVETSEVPDNTIVDVCKPGYALNSKVIRP  180 (194)
T ss_pred             -----cchHHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCCCChhHhceeeeeCCCCCCcCEEEEEeeCCcEeCCEEeeC
Confidence                 123578999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEeecCCCC
Q 018372          338 AEVGVTQAVEN  348 (357)
Q Consensus       338 A~VvVsK~~e~  348 (357)
                      |+|+|+++++.
T Consensus       181 A~V~Vak~~~e  191 (194)
T PRK14153        181 AMVSVARNPDE  191 (194)
T ss_pred             cEEEECCCCcc
Confidence            99999997654

>PRK14141 heat shock protein GrpE; Provisional

Probab=100.00  E-value=6e-46  Score=343.71  Aligned_cols=157  Identities=41%  Similarity=0.681  Sum_probs=141.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCCCCCCCCchh
Q 018372          185 LMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVP  264 (357)
Q Consensus       185 L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~s~d~a~~n~  264 (357)
                      |+.+++++++++++|+|++|||+|||||+++|++++++||+++|+++||||+|+|+||+++.+..       .+ ...++
T Consensus        40 i~~le~e~~elkd~~lR~~Ae~eN~RKR~~kE~e~~~~~a~~~~~~dLLpViDnLerAl~~~~~~-------~~-~~~~~  111 (209)
T PRK14141         40 LEALKAENAELKDRMLRLAAEMENLRKRTQRDVADARAYGIAGFARDMLSVSDNLRRALDAIPAE-------AR-AAADA  111 (209)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHHHhccccc-------cc-cccch
Confidence            45567788899999999999999999999999999999999999999999999999999876421       00 01134


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEeeeecEEEeec
Q 018372          265 LLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ  344 (357)
Q Consensus       265 ~lksl~eGVeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVLRPA~VvVsK  344 (357)
                      .+++|++||+||+++|.++|+++||++|+++|++|||++||||++++++++++|+|++|+|+||+|||||||||+|+|++
T Consensus       112 ~~~~l~eGv~mi~k~l~~vLek~GV~~I~~~Ge~FDP~~HEAv~~~~~~~~~~gtVv~V~qkGY~l~dRVLRpA~V~Vsk  191 (209)
T PRK14141        112 GLKALIEGVEMTERAMLNALERHGVKKLDPEGQKFDPNFHQAMFEVPNPDVPNNTVVQVVQAGYTIGERVLRPAMVGVAK  191 (209)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCChHHhceeeeecCCCCCcCEEEEEeeCCcEeCCEeecccEEEECC
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCc
Q 018372          345 AVEND  349 (357)
Q Consensus       345 ~~e~~  349 (357)
                      ++...
T Consensus       192 ~~~~~  196 (209)
T PRK14141        192 GGPKA  196 (209)
T ss_pred             CCCCc
Confidence            66433

>PRK14151 heat shock protein GrpE; Provisional

Probab=100.00  E-value=9.2e-46  Score=334.66  Aligned_cols=148  Identities=34%  Similarity=0.572  Sum_probs=137.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCCCCCCCCch
Q 018372          184 LLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAV  263 (357)
Q Consensus       184 ~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~s~d~a~~n  263 (357)
                      .++.+++++++++++|+|++|||+|||||+++|++++++||+++|+++||||+|||+||+++...             .+
T Consensus        28 ~i~~le~e~~el~d~~lR~~Ae~eN~rkR~~kE~e~~~~~a~~~~~~~LLpv~DnlerAl~~~~~-------------~~   94 (176)
T PRK14151         28 RVQELEEQLAAAKDQSLRAAADLQNVRRRAEQDVEKAHKFALEKFAGDLLPVVDSLERGLELSSA-------------DD   94 (176)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccc-------------cc
Confidence            45566788899999999999999999999999999999999999999999999999999986431             11


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEeeeecEEEee
Q 018372          264 PLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVT  343 (357)
Q Consensus       264 ~~lksl~eGVeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVLRPA~VvVs  343 (357)
                      +.+++|++||+||+++|.++|+++||++|+++|++|||++|+||++++++++++|+|++|+|+||+|||||||||+|+|+
T Consensus        95 ~~~~~~~~Gv~mi~k~l~~~L~k~Gv~~i~~~G~~FDP~~HEAv~~~~~~~~~~gtI~~v~qkGY~l~dRvLRpA~V~Va  174 (176)
T PRK14151         95 EAIKPMREGVELTLKMFQDTLKRYQLEAVDPHGEPFNPEHHQAMAMQESADVEPNSVLKVFQKGYLLNGRLLRPAMVVVS  174 (176)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCCHHHhhcceeeCCCCCCcCeEEEEeeCCcEECCEEecCcEEEec
Confidence            34578999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             c
Q 018372          344 Q  344 (357)
Q Consensus       344 K  344 (357)
                      +
T Consensus       175 k  175 (176)
T PRK14151        175 K  175 (176)
T ss_pred             C
Confidence            7

>PRK14147 heat shock protein GrpE; Provisional

Probab=100.00  E-value=8.9e-46  Score=333.64  Aligned_cols=146  Identities=33%  Similarity=0.508  Sum_probs=136.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCCCCCCCCch
Q 018372          184 LLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAV  263 (357)
Q Consensus       184 ~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~s~d~a~~n  263 (357)
                      .++.+++++++++++|+|++|||+|||||+++|++++++||+++|+++||||+|||+||+.+...               
T Consensus        26 ~l~~l~~e~~elkd~~lR~~Ad~eN~rkR~~kE~e~~~~~a~~~~~~~lLpv~DnlerAl~~~~~---------------   90 (172)
T PRK14147         26 EVESLRSEIALVKADALRERADLENQRKRIARDVEQARKFANEKLLGELLPVFDSLDAGLTAAGT---------------   90 (172)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhcccc---------------
Confidence            34567788899999999999999999999999999999999999999999999999999975421               


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEeeeecEEEee
Q 018372          264 PLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVT  343 (357)
Q Consensus       264 ~~lksl~eGVeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVLRPA~VvVs  343 (357)
                       ...+|++||+||+++|.++|+++||++|+++|++|||++|+||++++++++++|+|++|+|+||+|||||||||+|+|+
T Consensus        91 -~~~~l~~Gv~mi~k~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~g~Vv~v~qkGY~l~~RvLRpA~V~Va  169 (172)
T PRK14147         91 -EPSPLRDGLELTYKQLLKVAADNGLTLLDPVGQPFNPEHHQAISQGEAEGVAPGHVVQVFQKGYLLNERLLRPALVVVA  169 (172)
T ss_pred             -hHHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCChHHhceeeeecCCCCCcCEEEEEeeCCcEeCCEeccCceEEeC
Confidence             1357999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cC
Q 018372          344 QA  345 (357)
Q Consensus       344 K~  345 (357)
                      +.
T Consensus       170 k~  171 (172)
T PRK14147        170 KQ  171 (172)
T ss_pred             CC
Confidence            75

>PRK14155 heat shock protein GrpE; Provisional

Probab=100.00  E-value=1e-45  Score=341.98  Aligned_cols=155  Identities=41%  Similarity=0.653  Sum_probs=141.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCCCCCCCCch
Q 018372          184 LLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAV  263 (357)
Q Consensus       184 ~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~s~d~a~~n  263 (357)
                      .|+.+++++++++++|+|++|||+|||||+++|++++++||+++|+++||||+|||+||+.+....           ..+
T Consensus        21 ~l~~le~e~~elkd~~lR~~AefeN~RKR~~kE~e~~~~~a~~~~~~~LLpV~DnLerAl~~~~~~-----------~~~   89 (208)
T PRK14155         21 EIEALKAEVAALKDQALRYAAEAENTKRRAEREMNDARAYAIQKFARDLLGAADNLGRATAASPKD-----------SAD   89 (208)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhHHHHHhccccc-----------ccc
Confidence            455677888999999999999999999999999999999999999999999999999999875421           012


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhCCCeeeCC-CCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEeeeecEEEe
Q 018372          264 PLLKSLLEGVEMTEKQLGEVFKKFGVEKFDP-INEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGV  342 (357)
Q Consensus       264 ~~lksl~eGVeMi~kqL~~vL~k~GVe~Iep-vGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVLRPA~VvV  342 (357)
                      +.+++|++||+||+++|.++|+++||++|+| +|++|||++||||++++++++++|+|++|+|+||+|+|||||||+|+|
T Consensus        90 ~~~~~i~~Gvemi~k~~~~~L~k~GV~~I~~~~G~~FDP~~HEAv~~~~~~~~~~gtVi~V~qkGY~l~dRVLRPA~V~V  169 (208)
T PRK14155         90 PAVKNFIIGVEMTEKELLGAFERNGLKKIDPAKGDKFDPHLHQAMMEQPSTEVAAGGVLQVMQAGYELMGRLVRPAMVAV  169 (208)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHCCCceecCCCCCCCChhHhceeeeecCCCCCcCeEEEEeeCCeEeCCEeeccceEEE
Confidence            3468999999999999999999999999999 899999999999999999999999999999999999999999999999


Q ss_pred             ecCCCCc
Q 018372          343 TQAVEND  349 (357)
Q Consensus       343 sK~~e~~  349 (357)
                      ++++...
T Consensus       170 ak~~~~~  176 (208)
T PRK14155        170 AAKGSTG  176 (208)
T ss_pred             CCCCCcc
Confidence            9975543

>PRK14145 heat shock protein GrpE; Provisional

Probab=100.00  E-value=1.2e-45  Score=338.85  Aligned_cols=149  Identities=32%  Similarity=0.484  Sum_probs=138.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCCCCC
Q 018372          179 KEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSND  258 (357)
Q Consensus       179 ~e~ee~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~s~d  258 (357)
                      ..+.+.+..+++++++++++|+|++|||+|||||+++|++++++||+++|+++||||+|||+||+.+..           
T Consensus        48 ~~l~~~l~~le~e~~el~d~~lR~~AEfeN~rkR~~kE~e~~~~~a~e~~~~~LLpV~DnLerAl~~~~-----------  116 (196)
T PRK14145         48 EELKQKLQQKEVEAQEYLDIAQRLKAEFENYRKRTEKEKSEMVEYGKEQVILELLPVMDNFERALASSG-----------  116 (196)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHhccc-----------
Confidence            344555677889999999999999999999999999999999999999999999999999999997521           


Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEeeeec
Q 018372          259 TAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPA  338 (357)
Q Consensus       259 ~a~~n~~lksl~eGVeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVLRPA  338 (357)
                            ...+|++||+||+++|.++|+++||++|+++|++|||++|+||++++++++++|||++|+|+||+|+|||||||
T Consensus       117 ------~~~~l~~Gv~mi~k~l~~vL~k~GVe~I~~~Ge~FDP~~HEAv~~~~~~~~~~gtVv~V~qkGY~l~dRVLRPA  190 (196)
T PRK14145        117 ------DYNSLKEGIELIYRQFKKILDKFGVKEIEAEGQIFDPYKHHAVMQEEVEGKQPNEIIEVFQKGYYLKDKVIRPS  190 (196)
T ss_pred             ------cHHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCCchhhheeeeeCCCCCCcCEEEEEeeCCcEeCCEeeccc
Confidence                  13579999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeec
Q 018372          339 EVGVTQ  344 (357)
Q Consensus       339 ~VvVsK  344 (357)
                      +|+|++
T Consensus       191 ~V~Vak  196 (196)
T PRK14145        191 LVKVAK  196 (196)
T ss_pred             eEEeCC
Confidence            999985

>PRK14158 heat shock protein GrpE; Provisional

Probab=100.00  E-value=1.2e-45  Score=338.54  Aligned_cols=152  Identities=38%  Similarity=0.555  Sum_probs=140.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCCCC
Q 018372          178 LKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSN  257 (357)
Q Consensus       178 v~e~ee~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~s~  257 (357)
                      +..+++.+..+++++++++++|+|++|||+|||||+++|++++++||+++|+++||||+|||+||+.+...         
T Consensus        42 ~~~le~~l~~le~e~~el~d~~lR~~AefeN~RkR~~kE~e~~~~~a~~~~~~~lLpV~DnLerAl~~~~~---------  112 (194)
T PRK14158         42 IKELEEALAAKEAEAAANWDKYLRERADLENYRKRVQKEKEELLKYGNESLILEILPAVDNMERALDHADE---------  112 (194)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHhccCc---------
Confidence            44556667788899999999999999999999999999999999999999999999999999999986421         


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCC-CCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEeee
Q 018372          258 DTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDP-INEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIR  336 (357)
Q Consensus       258 d~a~~n~~lksl~eGVeMi~kqL~~vL~k~GVe~Iep-vGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVLR  336 (357)
                            ..+++|++||+||+++|.++|+++||++|++ +|++|||++||||+++++++.++|||++|+|+||+|+|||||
T Consensus       113 ------~~~~~i~~Gv~mi~k~l~~vLek~Gv~~I~~~~G~~FDP~~HEAv~~~~~~~~~~gtVv~v~qkGY~l~dRVLR  186 (194)
T PRK14158        113 ------ESMSAIIEGIRMTLSMLLSTLKKFGVTPVEAEKGTPFDPAYHQAMCQVESAEQEPNTVVAVFQKGYLLNERLLR  186 (194)
T ss_pred             ------chHHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCCCChHHhhhheeecCCCCCcCEEEEEeeCCcEeCCEEee
Confidence                  1247899999999999999999999999998 799999999999999999999999999999999999999999


Q ss_pred             ecEEEeec
Q 018372          337 PAEVGVTQ  344 (357)
Q Consensus       337 PA~VvVsK  344 (357)
                      ||+|+|+|
T Consensus       187 pA~V~VsK  194 (194)
T PRK14158        187 PAMVSVAT  194 (194)
T ss_pred             cceeEeCC
Confidence            99999986

>PRK14163 heat shock protein GrpE; Provisional

Probab=100.00  E-value=2.3e-45  Score=340.64  Aligned_cols=150  Identities=28%  Similarity=0.424  Sum_probs=139.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCCCCCCC
Q 018372          181 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTA  260 (357)
Q Consensus       181 ~ee~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~s~d~a  260 (357)
                      +.+.+..+++++++++|+|+|++|||+|||||+.||++++++||+++|+++||||+|||+||+.+.              
T Consensus        45 l~~~l~~l~~e~~el~d~~lR~~AEfeN~rkR~~kE~e~~~~~a~~~~~~~LLpVlDnLerAl~~~--------------  110 (214)
T PRK14163         45 LTAQLDQVRTALGERTADLQRLQAEYQNYRRRVERDRVTVKEIAVANLLSELLPVLDDVGRAREHG--------------  110 (214)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHHHhch--------------
Confidence            344566778889999999999999999999999999999999999999999999999999998641              


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEeeeecEE
Q 018372          261 GAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEV  340 (357)
Q Consensus       261 ~~n~~lksl~eGVeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVLRPA~V  340 (357)
                             .|++||+||+++|.++|+++||++|+++|++|||++|+||++++++++++|+|++|+|+||+|||||||||+|
T Consensus       111 -------~l~~Gv~mi~k~l~~~L~k~Gv~~I~~~G~~FDP~~HEAv~~~~~~~~~~gtVv~v~qkGY~l~~RVLRPA~V  183 (214)
T PRK14163        111 -------ELVGGFKSVAESLETTVAKLGLQQFGKEGEPFDPTIHEALMHSYAPDVTETTCVAILQPGYRIGERTIRPARV  183 (214)
T ss_pred             -------hHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCChhHhceeeeecCCCCCcCEEEEEeeCCcCcCCEeccCceE
Confidence                   4899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeecCCCCccc
Q 018372          341 GVTQAVENDRA  351 (357)
Q Consensus       341 vVsK~~e~~~~  351 (357)
                      +|+++++..++
T Consensus       184 ~Vsk~~~~~~~  194 (214)
T PRK14163        184 AVAEPQPGAQT  194 (214)
T ss_pred             EECCCCCCCCC
Confidence            99997554443

>PRK14140 heat shock protein GrpE; Provisional

Probab=100.00  E-value=2.9e-45  Score=335.22  Aligned_cols=153  Identities=37%  Similarity=0.546  Sum_probs=140.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCCCC
Q 018372          178 LKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSN  257 (357)
Q Consensus       178 v~e~ee~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~s~  257 (357)
                      +.+++..+..+++++++++++|+|++|||+|||||+++|++++++||+++|+++||||+|||+||+.+.+.         
T Consensus        39 ~~~l~~~i~~l~~ei~elkd~~lR~~Ae~eN~rkR~~rE~~~~~~~a~~~~~~~LLpvlDnLerAl~~~~~---------  109 (191)
T PRK14140         39 LDEEQAKIAELEAKLDELEERYLRLQADFENYKRRIQKENEAAEKYRAQSLASDLLPALDNFERALQIEAD---------  109 (191)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc---------
Confidence            34445556778889999999999999999999999999999999999999999999999999999986431         


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEeeee
Q 018372          258 DTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRP  337 (357)
Q Consensus       258 d~a~~n~~lksl~eGVeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVLRP  337 (357)
                           ++.+++|++||+||+++|.++|+++||++|+++|++|||++|+||+++++++.++|||+.|+|+||+||||||||
T Consensus       110 -----~~~~~~i~~Gv~mi~k~l~~~L~k~GV~~i~~~Ge~FDP~~HEAv~~~~~~~~~~gtVv~V~qkGY~l~dRVLRp  184 (191)
T PRK14140        110 -----DEQTKSLLKGVEMVHRQLLEALKKEGVEVIEAVGEQFDPNLHQAVMQDEDEDFESNEVVEELQKGYKLKDRVIRP  184 (191)
T ss_pred             -----cchHHHHHHHHHHHHHHHHHHHHHCCCEeeCCCCCCCChHHhccceeeCCCCCCcCeEEEEeeCCeEeCCEEecC
Confidence                 123578999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEeec
Q 018372          338 AEVGVTQ  344 (357)
Q Consensus       338 A~VvVsK  344 (357)
                      |+|+|++
T Consensus       185 A~V~Vak  191 (191)
T PRK14140        185 SMVKVNQ  191 (191)
T ss_pred             cEEEeCC
Confidence            9999985

>PRK14162 heat shock protein GrpE; Provisional

Probab=100.00  E-value=4.1e-45  Score=334.91  Aligned_cols=149  Identities=34%  Similarity=0.479  Sum_probs=137.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCCCCCCCC
Q 018372          182 EELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAG  261 (357)
Q Consensus       182 ee~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~s~d~a~  261 (357)
                      +..++.+++++++++++|+|++|||+|||||+++|++++++||+++|+++||||+|||+||+.+.+.             
T Consensus        45 ~~~l~~l~~e~~elkd~~lR~~AEfeN~rkR~~kE~e~~~~~a~~~~~~~LLpV~DnLerAl~~~~~-------------  111 (194)
T PRK14162         45 EKEIADLKAKNKDLEDKYLRSQAEIQNMQNRYAKERAQLIKYESQSLAKDVLPAMDNLERALAVKAD-------------  111 (194)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccc-------------
Confidence            3445667888999999999999999999999999999999999999999999999999999986432             


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCC-CCCCCceEEEeeccceeCCEeeeecEE
Q 018372          262 AVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDN-SKPPGTVAHVLKSGYTLYERVIRPAEV  340 (357)
Q Consensus       262 ~n~~lksl~eGVeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~-e~e~gtVveVlqkGY~L~dRVLRPA~V  340 (357)
                       +..+++|++||+||+++|.++|.++||++|+++|++|||++|+||++++++ +.++|+|++|+|+||+|||||||||+|
T Consensus       112 -~~~~~~l~~Gvemi~k~l~~vL~~~GV~~I~~~G~~FDP~~HEAv~~~~~~~~~~~gtVv~v~qkGY~l~dRVLRpA~V  190 (194)
T PRK14162        112 -DEAAKQLKKGVQMTLDHLVKALKDHGVTEIKADGEKFDPTLHQAVQTVAAENDDQKDHVVQVLQKGYQYKDRTLRPAMV  190 (194)
T ss_pred             -chhHHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCChhHhhhheeecCCCCCCcCEEEEEeeCCcEeCCEeeecceE
Confidence             123578999999999999999999999999999999999999999999974 689999999999999999999999999


Q ss_pred             Eeec
Q 018372          341 GVTQ  344 (357)
Q Consensus       341 vVsK  344 (357)
                      +|++
T Consensus       191 ~Vak  194 (194)
T PRK14162        191 VVAQ  194 (194)
T ss_pred             EeCC
Confidence            9985

>PRK14139 heat shock protein GrpE; Provisional

Probab=100.00  E-value=4.2e-45  Score=332.71  Aligned_cols=146  Identities=41%  Similarity=0.607  Sum_probs=135.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCCCCCCCCc
Q 018372          183 ELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGA  262 (357)
Q Consensus       183 e~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~s~d~a~~  262 (357)
                      +.++.+++++++++|+|+|++|||+|||||+++|++++++||+++|+++||||+|||+||+.+..               
T Consensus        39 ~~l~~le~e~~elkd~~lR~~AefeN~rKR~~kE~e~~~~~a~~~~~~~LLpv~DnLerAl~~~~---------------  103 (185)
T PRK14139         39 AELAEAEAKAAELQDSFLRAKAETENVRRRAQEDVAKAHKFAIESFAESLLPVKDSLEAALADES---------------  103 (185)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccc---------------
Confidence            34566778899999999999999999999999999999999999999999999999999996421               


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEeeeecEEEe
Q 018372          263 VPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGV  342 (357)
Q Consensus       263 n~~lksl~eGVeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVLRPA~VvV  342 (357)
                       ..+.+|++||+||+++|.++|+++||++|+++|++|||++||||+++++ +.++|+|++|+|+||+|||||||||+|+|
T Consensus       104 -~~~~~l~~Gv~mi~k~l~~vL~k~Gv~~I~~~G~~FDP~~HEAv~~~~~-~~~~gtVi~V~qkGY~l~dRVLRPA~V~V  181 (185)
T PRK14139        104 -GDLEKLREGVELTLKQLTSAFEKGRVVEINPVGEKFDPHQHQAISMVPA-EQEPNTVVAVLQKGYTIADRVLRPALVTV  181 (185)
T ss_pred             -chHHHHHHHHHHHHHHHHHHHHHCCCceeCCCCCCCChHHhheeeeecC-CCCcCEEEEEeeCCcEeCCEeccCceEEe
Confidence             1246899999999999999999999999999999999999999999998 67899999999999999999999999999


Q ss_pred             ecC
Q 018372          343 TQA  345 (357)
Q Consensus       343 sK~  345 (357)
                      +++
T Consensus       182 ak~  184 (185)
T PRK14139        182 AAP  184 (185)
T ss_pred             CCC
Confidence            984

>PRK14160 heat shock protein GrpE; Provisional

Probab=100.00  E-value=5.6e-45  Score=337.61  Aligned_cols=157  Identities=32%  Similarity=0.462  Sum_probs=146.1

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhh
Q 018372          170 SRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKEN  249 (357)
Q Consensus       170 s~deL~klv~e~ee~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~  249 (357)
                      ...++.+.+..+++.+..+++++++++++|+|++|||+|||||+.||++++++||+++|+++||||+|||+||+.+..  
T Consensus        55 ~~~~l~~e~~~l~~~l~~l~~e~~elkd~~lR~~AefeN~RKR~~kE~e~~~~~a~e~~~~~LLpVlDnLerAl~~~~--  132 (211)
T PRK14160         55 KIEELKDENNKLKEENKKLENELEALKDRLLRTVAEYDNYRKRTAKEKEGIYSDACEDVLKELLPVLDNLERAAAVEG--  132 (211)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccc--
Confidence            445667778888888999999999999999999999999999999999999999999999999999999999997521  


Q ss_pred             cccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccce
Q 018372          250 FLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYT  329 (357)
Q Consensus       250 ~~k~d~s~d~a~~n~~lksl~eGVeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~  329 (357)
                                     ....|++||+||+++|.++|+++||++|++.| +|||++|+||++++++++++|+|++|+|+||+
T Consensus       133 ---------------~~~~l~~Gv~mi~kql~~vL~k~GVe~I~~~G-~FDP~~HEAv~~~~~~e~~~gtVveV~qkGY~  196 (211)
T PRK14160        133 ---------------SVEDLKKGIEMTVKQFKTSLEKLGVEEISTEG-EFDPNLHNAVMHVEDENYGENEIVEVFQKGYK  196 (211)
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHHHCCCEEeCCCC-CCChHHhceeeeeCCCCCCcCeEEEEeeCCcE
Confidence                           12579999999999999999999999999999 89999999999999999999999999999999


Q ss_pred             eCCEeeeecEEEeec
Q 018372          330 LYERVIRPAEVGVTQ  344 (357)
Q Consensus       330 L~dRVLRPA~VvVsK  344 (357)
                      |||||||||+|+|++
T Consensus       197 l~dRVLRpA~V~Va~  211 (211)
T PRK14160        197 RGDKVIRYSMVKVAN  211 (211)
T ss_pred             eCCEeeecceEEeCC
Confidence            999999999999984

>PRK14150 heat shock protein GrpE; Provisional

Probab=100.00  E-value=7.5e-45  Score=332.76  Aligned_cols=151  Identities=41%  Similarity=0.632  Sum_probs=134.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCCCC
Q 018372          178 LKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSN  257 (357)
Q Consensus       178 v~e~ee~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~s~  257 (357)
                      +.++++.+..+++   +++++|+|++|||+|||||+++|++++++||+++|+++||||+|||+||+.+...         
T Consensus        43 i~~l~~~l~~~~~---~~kd~~lR~~AefeN~rkR~~kE~~~~~~~a~~~~~~~lL~v~DnlerAl~~~~~---------  110 (193)
T PRK14150         43 IAELEAQLAEAQA---EERDSVLRARAEVENIRRRAEQDVEKAHKFALEKFANELLPVIDNLERALQAADK---------  110 (193)
T ss_pred             HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHhcccc---------
Confidence            3444444444332   6899999999999999999999999999999999999999999999999975421         


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEeeee
Q 018372          258 DTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRP  337 (357)
Q Consensus       258 d~a~~n~~lksl~eGVeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVLRP  337 (357)
                          .+..+++|++||+||+++|.++|+++||++|+++|++|||++|+||+++++++.++|||++|+|+||+||||||||
T Consensus       111 ----~~~~~~~~~~Gv~mi~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtI~~v~q~GY~l~drvLRp  186 (193)
T PRK14150        111 ----ENEALKALIEGVELTLKSLLDTVAKFGVEVVGPVGEPFNPEVHQAISMQESEDHEPNTVMMVMQKGYTLNGRLLRP  186 (193)
T ss_pred             ----cchhHHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCCCCHhHcceeeeeCCCCCCcCEEEEEeeCCeEeCCEEecc
Confidence                0123578999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEeec
Q 018372          338 AEVGVTQ  344 (357)
Q Consensus       338 A~VvVsK  344 (357)
                      |+|+|++
T Consensus       187 A~V~Vsk  193 (193)
T PRK14150        187 AMVMVSK  193 (193)
T ss_pred             eEEEeCC
Confidence            9999985

>PRK14144 heat shock protein GrpE; Provisional

Probab=100.00  E-value=6.8e-45  Score=334.45  Aligned_cols=164  Identities=36%  Similarity=0.579  Sum_probs=145.4

Q ss_pred             chhhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHh
Q 018372          163 SESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRA  242 (357)
Q Consensus       163 ~~~e~~ls~deL~klv~e~ee~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERA  242 (357)
                      ...+..+...++..    +++.+..+++++++++++|+|++|||+|||||+++|++++++||+++|+++||||+|||+||
T Consensus        36 ~~~~~~~~~~~~~~----l~~~i~~le~e~~elkdk~lR~~AefeN~RKR~~kE~e~~~~~a~~~~~~~LLpV~DnLerA  111 (199)
T PRK14144         36 QHQEPALGHPSYTA----LEEQLTLAEQKAHENWEKSVRALAELENVRRRMEREVANAHKYGVEKLISALLPVVDSLEQA  111 (199)
T ss_pred             ccccCCCCchhHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHH
Confidence            33445555555433    34456678899999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhcccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEE
Q 018372          243 SSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAH  322 (357)
Q Consensus       243 le~~~e~~~k~d~s~d~a~~n~~lksl~eGVeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e~gtVve  322 (357)
                      +.+....            .   ..+|++||+||+++|.++|+++||++|+++|++|||++|+||+++++++.++|||++
T Consensus       112 l~~~~~~------------~---~~~i~~Gv~mi~k~l~~~L~k~GV~~I~~~G~~FDP~~HEAv~~~~~~~~~~gtVv~  176 (199)
T PRK14144        112 LQLADKN------------S---DPSMHEGLELTMKLFLDALQKFDVEQIDPLGQTFDPQQHEAMSMQPAPGAPPNSVIT  176 (199)
T ss_pred             HHccccc------------c---hhHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCChhHhceeeeeCCCCCCcCeEEE
Confidence            9865320            0   147999999999999999999999999999999999999999999999999999999


Q ss_pred             EeeccceeCCEeeeecEEEeecC
Q 018372          323 VLKSGYTLYERVIRPAEVGVTQA  345 (357)
Q Consensus       323 VlqkGY~L~dRVLRPA~VvVsK~  345 (357)
                      |+|+||+|+|||||||+|+|+++
T Consensus       177 V~qkGY~l~dRVLRpA~V~Vskk  199 (199)
T PRK14144        177 VFQKGYKLSDRVIRPARVIVSTK  199 (199)
T ss_pred             EeeCCcEECCEEecccEEEecCC
Confidence            99999999999999999999874

>COG0576 GrpE Molecular chaperone GrpE (heat shock protein) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=6e-45  Score=333.20  Aligned_cols=151  Identities=44%  Similarity=0.673  Sum_probs=139.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCCCCCCCCc
Q 018372          183 ELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGA  262 (357)
Q Consensus       183 e~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~s~d~a~~  262 (357)
                      .++..++.++++++++|+|++|||+|||||+++|++++++||+++|+.+||||+|||+||+.+....       .     
T Consensus        43 ~~i~~Le~q~~e~~~~~lr~~Ae~eN~rkR~~re~e~~~k~a~e~~~~dlLpviDnlerAl~~~~~~-------~-----  110 (193)
T COG0576          43 QEIAELEAQLEELKDKYLRAQAEFENLRKRTEREREEAKKYAIEKFAKDLLPVIDNLERALEAAEDD-------K-----  110 (193)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-------c-----
Confidence            3456677888889999999999999999999999999999999999999999999999999875431       1     


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEeeeecEEEe
Q 018372          263 VPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGV  342 (357)
Q Consensus       263 n~~lksl~eGVeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVLRPA~VvV  342 (357)
                      ++. ++|++||+||+++|.++|.++||++|++.|++|||++|+||++++++++++|||++|+|+||+|||||||||+|+|
T Consensus       111 d~~-~~l~~Gvem~~~~l~~~L~k~Gv~~i~~~Ge~FDP~~HeAv~~~~~~~~~~~tVv~v~qkGY~l~dRVLRpA~V~V  189 (193)
T COG0576         111 DPE-KALLEGVEMTLDQLLDALEKLGVEEIGPEGEKFDPNLHEAVQRVESEDVEPNTVVEVLQKGYKLNDRVLRPAMVKV  189 (193)
T ss_pred             chH-HHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCCHHHhhheeeecCCCCCCCeEEEEeecCeeeCCEeccceEEEE
Confidence            112 6899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCC
Q 018372          343 TQAV  346 (357)
Q Consensus       343 sK~~  346 (357)
                      ++++
T Consensus       190 ak~~  193 (193)
T COG0576         190 AKKE  193 (193)
T ss_pred             ecCC
Confidence            9864

>PRK14146 heat shock protein GrpE; Provisional

Probab=100.00  E-value=7.4e-45  Score=337.73  Aligned_cols=152  Identities=30%  Similarity=0.439  Sum_probs=139.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCCCCCCC
Q 018372          181 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTA  260 (357)
Q Consensus       181 ~ee~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~s~d~a  260 (357)
                      ++..+..+++++++++++|+|++|||+|||||+.+|++++++||+++|+++||||+|||+||+.+...            
T Consensus        59 l~~~l~~l~~e~~el~d~~lR~~AdfeN~rkR~~kE~e~~~~~a~e~~~~~lLpv~DnlerAl~~~~~------------  126 (215)
T PRK14146         59 LQKELDNAKKEIESLKDSWARERAEFQNFKRRSAQEFVSIRKEAVKSLVSGFLNPIDNLERVGATQNQ------------  126 (215)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccc------------
Confidence            34456677889999999999999999999999999999999999999999999999999999976421            


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCC----Eeee
Q 018372          261 GAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYE----RVIR  336 (357)
Q Consensus       261 ~~n~~lksl~eGVeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~d----RVLR  336 (357)
                        ++.+++|++||+||+++|.++|+++||++|+++|++|||++|+||++++++++++|+|+.|+|+||+|+|    ||||
T Consensus       127 --~~~~~~l~~Gv~mi~k~l~~~L~k~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~g~Vv~v~qkGY~l~~r~~~RvLR  204 (215)
T PRK14146        127 --SEELKPFVEGVKMILKEFYSVLEKSNVIRFDPKGEPFDPMSMEALSSEEGDQYSEETVIDVYQAGYYYKENEDKFTLR  204 (215)
T ss_pred             --cchhhHHHHHHHHHHHHHHHHHHHCcCeeeCCCCCCCChhHhceeeeecCCCCCcCEEEEEeeCCeEeCCccCCeecc
Confidence              1235789999999999999999999999999999999999999999999999999999999999999999    6999


Q ss_pred             ecEEEeecCC
Q 018372          337 PAEVGVTQAV  346 (357)
Q Consensus       337 PA~VvVsK~~  346 (357)
                      ||+|+|++++
T Consensus       205 pA~V~Vak~~  214 (215)
T PRK14146        205 PARVRIGKPK  214 (215)
T ss_pred             CceEEeCCCC
Confidence            9999999854

>PRK14159 heat shock protein GrpE; Provisional

Probab=100.00  E-value=1.1e-44  Score=327.89  Aligned_cols=145  Identities=34%  Similarity=0.510  Sum_probs=134.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCCCCCCCCchh
Q 018372          185 LMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVP  264 (357)
Q Consensus       185 L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~s~d~a~~n~  264 (357)
                      ++.+++++++++++|+|++|||+|||||+.+|++++++||+++|+++||||+|||+||+.+.+.              +.
T Consensus        32 i~~l~~e~~elkd~~lR~~AdfeN~rkR~~rE~e~~~~~a~~~~~~~LLpV~DnlerAl~~~~~--------------~~   97 (176)
T PRK14159         32 QNKLQKDYDELKDKYMRANAEFENIKKRMEKEKLSAMAYANESFAKDLLDVLDALEAAVNVECH--------------DE   97 (176)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccc--------------cc
Confidence            4556788899999999999999999999999999999999999999999999999999986432              01


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEeeeecEEEeec
Q 018372          265 LLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ  344 (357)
Q Consensus       265 ~lksl~eGVeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVLRPA~VvVsK  344 (357)
                      ...+|++||+||+++|.++|+++||++|++.| +|||++|+||++++++++++|+|++|+|+||+|||||||||+|+|++
T Consensus        98 ~~~~l~~Gv~mi~k~l~~vL~k~Gv~~I~~~G-~FDP~~HEAv~~~~~~~~~~gtVv~v~qkGY~l~dRVLRpA~V~Vak  176 (176)
T PRK14159         98 ISLKIKEGVQNTLDLFLKKLEKHGVALIKEEK-EFDPNLHEAMFHVDSENHQSGEVVQVLQKGYKIADRVIRPTKVSVAK  176 (176)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHCcCEecCCCC-CCChHHhhhhheeCCCCCCcCeEEEEeeCCcEeCCEeeecceeEeCC
Confidence            23679999999999999999999999999999 69999999999999999999999999999999999999999999985

>PRK14154 heat shock protein GrpE; Provisional

Probab=100.00  E-value=1.8e-44  Score=333.53  Aligned_cols=147  Identities=33%  Similarity=0.481  Sum_probs=136.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCCCCCCCCch
Q 018372          184 LLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAV  263 (357)
Q Consensus       184 ~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~s~d~a~~n  263 (357)
                      .|+.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+...             .+
T Consensus        60 el~~le~e~~elkd~~lRl~ADfeNyRKR~~kE~e~~~~~a~e~~~~~LLpVlDnLeRAL~~~~~-------------~~  126 (208)
T PRK14154         60 QLTRMERKVDEYKTQYLRAQAEMDNLRKRIEREKADIIKFGSKQLITDLLPVADSLIHGLESPAS-------------ED  126 (208)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccc-------------cc
Confidence            45567788899999999999999999999999999999999999999999999999999986421             12


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhCCCeeeCC-CCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEeeeecEEEe
Q 018372          264 PLLKSLLEGVEMTEKQLGEVFKKFGVEKFDP-INEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGV  342 (357)
Q Consensus       264 ~~lksl~eGVeMi~kqL~~vL~k~GVe~Iep-vGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVLRPA~VvV  342 (357)
                      +.+++|++||+||+++|.++|+++||++|++ +|++|||++||||+++++++.++|||++|+|+||+|+|||||||+|+|
T Consensus       127 ~~~~~l~eGvemi~k~l~~vL~k~GVe~I~~~~G~~FDP~~HEAv~~~~~~~~~~gtVveV~qkGY~l~dRVLRPA~V~V  206 (208)
T PRK14154        127 PQVKSMRDGMSLTLDLLHNTLAKHGVQVINPNPGDPFDPALHEAMSVQAVPDAKPDTIIQVLQKGYQLNGRVLRAARVIV  206 (208)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCCCChhHhheeeeeCCCCCCcCEEEEEeeCCcEeCCEEecceEEEe
Confidence            3457899999999999999999999999998 699999999999999999999999999999999999999999999999


Q ss_pred             e
Q 018372          343 T  343 (357)
Q Consensus       343 s  343 (357)
                      +
T Consensus       207 a  207 (208)
T PRK14154        207 A  207 (208)
T ss_pred             C
Confidence            7

>PRK10325 heat shock protein GrpE; Provisional

Probab=100.00  E-value=2.1e-44  Score=330.70  Aligned_cols=139  Identities=40%  Similarity=0.619  Sum_probs=129.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCCCCCCCCchhhHHHHHHHHH
Q 018372          195 MQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVE  274 (357)
Q Consensus       195 lkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~s~d~a~~n~~lksl~eGVe  274 (357)
                      ++|+|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+...         +    +..+++|++||+
T Consensus        58 ~~d~~lR~~Ae~eN~rkR~~ke~~~~~~~a~~~~~~~lLpv~DnlerAl~~~~~---------~----~~~~~~l~~Gv~  124 (197)
T PRK10325         58 ERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRALEVADK---------A----NPDMSAMVEGIE  124 (197)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccc---------c----chhHHHHHHHHH
Confidence            589999999999999999999999999999999999999999999999986421         0    123578999999


Q ss_pred             HHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEeeeecEEEeecCC
Q 018372          275 MTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAV  346 (357)
Q Consensus       275 Mi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVLRPA~VvVsK~~  346 (357)
                      ||+++|.++|+++||++|+++|++|||++|+||+++++++.++|+|++|+|+||+|+|||||||+|+|++++
T Consensus       125 m~~~~l~~~L~~~Gv~~i~~~G~~FDP~~HEAv~~~~~~~~~~~~Vv~v~qkGY~l~drvlRpA~V~Vsk~~  196 (197)
T PRK10325        125 LTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKAK  196 (197)
T ss_pred             HHHHHHHHHHHHCcCeeeCCCCCCCChhHhceeeeeCCCCCCcCeEEEEeeCCcEeCCEeccCceEEeCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999854

>PRK14149 heat shock protein GrpE; Provisional

Probab=100.00  E-value=3.1e-44  Score=328.37  Aligned_cols=146  Identities=34%  Similarity=0.510  Sum_probs=134.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCCCCCCCCchh
Q 018372          185 LMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVP  264 (357)
Q Consensus       185 L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~s~d~a~~n~  264 (357)
                      ++.+++++++++++|+|++|||+|||||+++|++++++||+++|+++||||+|+|+||+.+...              +.
T Consensus        45 ~~~l~~e~~elkd~~lR~~AefEN~rKR~~kE~e~~~~~a~~~~~~~LLpVlDnLerAl~~~~~--------------~~  110 (191)
T PRK14149         45 KEDFELKYKEMHEKYLRVHADFENVKKRLERDKSMALEYAYEKIALDLLPVIDALLGALKSAAE--------------VD  110 (191)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccc--------------cc
Confidence            4556778889999999999999999999999999999999999999999999999999986532              11


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEeeeecEEEeec
Q 018372          265 LLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ  344 (357)
Q Consensus       265 ~lksl~eGVeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVLRPA~VvVsK  344 (357)
                      ...+|++||+||+++|.++|+++||++|++.| +|||++|+||+++++++.++|||++|+|+||+|+|||||||+|+|++
T Consensus       111 ~~~~l~~Gv~mi~k~l~~vL~k~GV~~I~~~G-~FDP~~HEAv~~v~~~~~~~gtVv~V~QkGY~l~dRVLRPA~V~Vak  189 (191)
T PRK14149        111 KESALTKGLELTMEKLHEVLARHGIEGIECLE-EFDPNFHNAIMQVKSEEKENGKIVQVLQQGYKYKGRVLRPAMVSIAK  189 (191)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHCCCEEeCCCC-CCChHHhheeeeecCCCCCcCEEEEEeeCCcEeCCEEeeccEEEeCC
Confidence            24679999999999999999999999999999 59999999999999999999999999999999999999999999998


Q ss_pred             C
Q 018372          345 A  345 (357)
Q Consensus       345 ~  345 (357)
                      +
T Consensus       190 ~  190 (191)
T PRK14149        190 N  190 (191)
T ss_pred             C
Confidence            3

>PRK14157 heat shock protein GrpE; Provisional

Probab=100.00  E-value=3.6e-43  Score=328.28  Aligned_cols=141  Identities=30%  Similarity=0.490  Sum_probs=132.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCCCCCCCCch
Q 018372          184 LLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAV  263 (357)
Q Consensus       184 ~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~s~d~a~~n  263 (357)
                      .+..+++++++++++|+|++|||+|||||++||++++++|++++|+++||||+|||+||+.+.                 
T Consensus        85 ~l~~le~e~~e~kd~llR~~AEfeNyRKR~~rE~e~~~~~a~~~~~~dLLpvlDnLeRAl~~~-----------------  147 (227)
T PRK14157         85 PLGQAKKEAAEYLEALQRERAEFINYRNRTQKEQDRFRQHGIIDVLTALLPALDDIDRIREHS-----------------  147 (227)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHhcc-----------------
Confidence            345567888999999999999999999999999999999999999999999999999999743                 


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEeeeecEEEee
Q 018372          264 PLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVT  343 (357)
Q Consensus       264 ~~lksl~eGVeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVLRPA~VvVs  343 (357)
                          .+.+||+||+++|.++|+++||++|+++|++|||++||||++++++++++|||++|+|+||+|||||||||+|+|+
T Consensus       148 ----~~~~~~~~i~k~l~~vL~k~GVe~I~~~Ge~FDP~~HEAV~~~~~~~~~~gtVi~V~QkGY~l~dRVLRPA~V~Va  223 (227)
T PRK14157        148 ----EMDDSFKAVAAKIDKAFEKFGVEKFGEKGEDFDPTKHDAILHKPDPDAEKETVDTVVEAGYRIGDRVIRAARVVVA  223 (227)
T ss_pred             ----ccchHHHHHHHHHHHHHHHCCCEEeCCCCCCCChhhhceeeeecCCCCCcCEEEEEeeCCceeCCEeccCceEEeC
Confidence                1346889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cC
Q 018372          344 QA  345 (357)
Q Consensus       344 K~  345 (357)
                      ++
T Consensus       224 k~  225 (227)
T PRK14157        224 SP  225 (227)
T ss_pred             CC
Confidence            83

>KOG3003 consensus Molecular chaperone of the GrpE family [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=5.8e-43  Score=326.33  Aligned_cols=162  Identities=56%  Similarity=0.800  Sum_probs=146.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCCCCC
Q 018372          179 KEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSND  258 (357)
Q Consensus       179 ~e~ee~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~s~d  258 (357)
                      +++++.++ ++++..+|+|+|+|..||++|+|+|+.|..++++.||+++|++|||.|.|+|++|++++++.+.+.     
T Consensus        74 ~~l~~~~k-~~~e~~eLkdk~~rs~Ad~eNlr~R~~r~~edak~FaiQ~f~kdLleVaD~Le~a~~~v~ee~~~~-----  147 (236)
T KOG3003|consen   74 ALLEKVLK-LEKEEQELKDKYLRSLAECENLRDRTIRDVEDAKKFAIQSFCKDLLEVADNLEKATECVKEESEKE-----  147 (236)
T ss_pred             HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhccc-----
Confidence            33344444 345559999999999999999999999999999999999999999999999999999998753322     


Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEeeeec
Q 018372          259 TAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPA  338 (357)
Q Consensus       259 ~a~~n~~lksl~eGVeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVLRPA  338 (357)
                        ..+..++.+++|+.||+++|.++|.+||+++++|+|++||||.||||+++|+..+++|||..|.+.||+||||+||||
T Consensus       148 --d~~~~L~~l~eGl~mte~ql~~vf~KhGLekldPigekFDPn~HEAvfq~p~~~k~pgtV~~v~k~Gy~L~~R~IRPA  225 (236)
T KOG3003|consen  148 --DQKKDLKDLFEGLSMTEAQLKEVFAKHGLEKLDPIGEKFDPNEHEAVFQVPDAAKEPGTVALVTKKGYKLNGRVIRPA  225 (236)
T ss_pred             --ccchHHHHHHhHHHHHHHHHHHHHHHcCceecCCCCCCCCcchhheeEeccccCCCCCeEEEEeccCcccCCeeechh
Confidence              245679999999999999999999999999999999999999999999999988999999999999999999999999


Q ss_pred             EEEeecCCCC
Q 018372          339 EVGVTQAVEN  348 (357)
Q Consensus       339 ~VvVsK~~e~  348 (357)
                      +|+|++++++
T Consensus       226 ~VgV~~~~~~  235 (236)
T KOG3003|consen  226 MVGVVKGGEN  235 (236)
T ss_pred             heeeecCCCC
Confidence            9999998875

>PRK14156 heat shock protein GrpE; Provisional

Probab=100.00  E-value=1.5e-42  Score=314.06  Aligned_cols=155  Identities=34%  Similarity=0.502  Sum_probs=137.8

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhh
Q 018372          170 SRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKEN  249 (357)
Q Consensus       170 s~deL~klv~e~ee~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~  249 (357)
                      +.+++....+. ...|+.+++++++++++|+|++|||+|||||+++|++++++||.++|+++||||+|||+||+.+... 
T Consensus        22 ~~~~~~~~~~~-~~~l~~l~~e~~elkd~~lR~~AEfeN~rKR~~rE~e~~~~~a~~~~~~~LLpVlDnLerAl~~~~~-   99 (177)
T PRK14156         22 TVEEVVEETPE-KSELELANERADEFENKYLRAHAEMQNIQRRANEERQQLQRYRSQDLAKAILPSLDNLERALAVEGL-   99 (177)
T ss_pred             HHHHHHhhccc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhCccc-
Confidence            45555544443 4456778899999999999999999999999999999999999999999999999999999975321 


Q ss_pred             cccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCC-CCCCCceEEEeeccc
Q 018372          250 FLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDN-SKPPGTVAHVLKSGY  328 (357)
Q Consensus       250 ~~k~d~s~d~a~~n~~lksl~eGVeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~-e~e~gtVveVlqkGY  328 (357)
                                      ..+|++||+||+++|.++|+++||++|++.  +|||++|+||++++++ ++++|+|++|+|+||
T Consensus       100 ----------------~~~l~~Gv~mi~k~l~~~L~~~GV~~i~~~--~FDP~~HEAv~~~~~~~~~~~gtVv~V~qkGY  161 (177)
T PRK14156        100 ----------------TDDVKKGLEMVQESLIQALKEEGVEEVAVD--SFDHNLHMAVQTLPADDEHPADSIAQVFQKGY  161 (177)
T ss_pred             ----------------chhHHHHHHHHHHHHHHHHHHCCCeecCCC--CCChhHhhcceeecCCCCCCcCEEEEEeeCCc
Confidence                            136899999999999999999999999985  9999999999999864 589999999999999


Q ss_pred             eeCCEeeeecEEEeec
Q 018372          329 TLYERVIRPAEVGVTQ  344 (357)
Q Consensus       329 ~L~dRVLRPA~VvVsK  344 (357)
                      +|||||||||+|+|++
T Consensus       162 ~l~dRVLRpA~V~Va~  177 (177)
T PRK14156        162 KLHERLLRPAMVVVYN  177 (177)
T ss_pred             EeCCEEeecceeEeCC
Confidence            9999999999999974

>PRK14142 heat shock protein GrpE; Provisional

Probab=100.00  E-value=1.8e-41  Score=315.83  Aligned_cols=144  Identities=26%  Similarity=0.401  Sum_probs=129.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCCCCCCCCchhhHHH
Q 018372          189 NEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKS  268 (357)
Q Consensus       189 ~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~s~d~a~~n~~lks  268 (357)
                      .+++++|+++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+...         +          
T Consensus        46 ~~e~~elkdk~lR~~AEfEN~RKR~erE~e~~~~~A~e~~~kdLLpVlDnLERAL~~~~~---------~----------  106 (223)
T PRK14142         46 EDKVAELTADLQRVQADFANYRKRALRDQQAAADRAKASVVSQLLGVLDDLERARKHGDL---------E----------  106 (223)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHhHHHHHHhcccc---------c----------
Confidence            456778899999999999999999999999999999999999999999999999975321         0          


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCC-CCceEEEeeccceeCCEeeeecEEEeecCCC
Q 018372          269 LLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKP-PGTVAHVLKSGYTLYERVIRPAEVGVTQAVE  347 (357)
Q Consensus       269 l~eGVeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e-~gtVveVlqkGY~L~dRVLRPA~VvVsK~~e  347 (357)
                       ..+|.||+++|.++|+++||++|+++|++|||++||||+++++++.+ .|+|++|+|+||+|+|||||||+|+|++.+.
T Consensus       107 -~~~v~~I~kqL~~iLek~GVe~I~~~Ge~FDP~~HEAv~~ve~~e~~~~~tVveV~QkGYkL~dRVLRPA~V~Vsk~~~  185 (223)
T PRK14142        107 -SGPLKSVADKLDSALTGLGLVAFGAEGEDFDPVLHEAVQHEGDGGQGSKPVIGTVMRQGYQLGEQVLRHALVGVVDTVV  185 (223)
T ss_pred             -cHHHHHHHHHHHHHHHHCCCEEeCCCCCCCChhhhceeeeecCCCCCCCCEEEEEecCCcEeCCEeccCceEEECCCCC
Confidence             13578999999999999999999999999999999999999988764 6799999999999999999999999999876


Q ss_pred             Ccccc
Q 018372          348 NDRAE  352 (357)
Q Consensus       348 ~~~~~  352 (357)
                      ...++
T Consensus       186 ~~~~~  190 (223)
T PRK14142        186 VDAAE  190 (223)
T ss_pred             CCccc
Confidence            55443

>PRK14164 heat shock protein GrpE; Provisional

Probab=100.00  E-value=1.4e-40  Score=309.70  Aligned_cols=138  Identities=28%  Similarity=0.394  Sum_probs=126.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCCCCCCCCchh
Q 018372          185 LMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVP  264 (357)
Q Consensus       185 L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~s~d~a~~n~  264 (357)
                      +..+++++++++++|+|++|||+|||||++||++++++|++++|+++||||+|||+||+.+..                 
T Consensus        79 ~~~le~el~el~d~llR~~AE~eN~RkR~~rE~e~~~~~a~~~~~~~LLpVlDnLerAl~~~~-----------------  141 (218)
T PRK14164         79 ASTVEAQLAERTEDLQRVTAEYANYRRRTERERQAIIETAKAGVATDLLPILDDLDLAEQHGD-----------------  141 (218)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccc-----------------
Confidence            455678889999999999999999999999999999999999999999999999999997531                 


Q ss_pred             hHHHHHHH-HHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEeeeecEEEee
Q 018372          265 LLKSLLEG-VEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVT  343 (357)
Q Consensus       265 ~lksl~eG-VeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVLRPA~VvVs  343 (357)
                          +.+| |.||+++|.++|+++||++|+++|++|||++||||+++++++  .++|+.|+|+||+|||||||||+|+|+
T Consensus       142 ----~~~g~l~~i~~~l~~vL~k~Gve~I~~~Ge~FDP~~HEAV~~~~~~~--~~~V~~V~qkGY~l~dRVLRPA~V~Va  215 (218)
T PRK14164        142 ----LNEGPLKAFSDKLTNVLAGLKVEKFGEEGDAFDPEIHEAVQDLSSGD--EKVLGTVLRKGYRMGDRVLRTAMVIIA  215 (218)
T ss_pred             ----ccccHHHHHHHHHHHHHHHCCCEEeCCCCCCCChhHhheeeeecCCC--CCEeeEEeeCCcEECCEeccCceEEeC
Confidence                1233 789999999999999999999999999999999999998764  589999999999999999999999999


Q ss_pred             cC
Q 018372          344 QA  345 (357)
Q Consensus       344 K~  345 (357)
                      ++
T Consensus       216 k~  217 (218)
T PRK14164        216 DP  217 (218)
T ss_pred             CC
Confidence            83

>cd00446 GrpE GrpE is the adenine nucleotide exchange factor of DnaK (Hsp70)-type ATPases

Probab=100.00  E-value=2.3e-39  Score=279.91  Aligned_cols=136  Identities=53%  Similarity=0.800  Sum_probs=128.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCCCCCCCCchhhHHHHHHH
Q 018372          193 KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEG  272 (357)
Q Consensus       193 eelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~s~d~a~~n~~lksl~eG  272 (357)
                      ++++++|+|++|||+|||+|+.++++++++|++++|+++||||+|+|++|+++...              .+.++.+.+|
T Consensus         2 ~~~~~~~~r~~ae~~N~rkr~~~e~~~~~~~~~~~~~~~ll~v~D~le~a~~~~~~--------------~~~~~~~~~g   67 (137)
T cd00446           2 EELKDKLLRALAEFENYRKRTEREREEARKYAIEKFAKDLLPVLDNLERALEAAKK--------------EEELKNLVEG   67 (137)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--------------cchHHHHHHH
Confidence            46789999999999999999999999999999999999999999999999986532              1245789999


Q ss_pred             HHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEeeeecEEEe
Q 018372          273 VEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGV  342 (357)
Q Consensus       273 VeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVLRPA~VvV  342 (357)
                      |+||+++|.++|.++||++|++.|++|||++|+||+++++++.++|+|++|+++||+++|||||||+|+|
T Consensus        68 ~~~i~~~l~~~L~~~Gv~~i~~~g~~FDp~~Heav~~~~~~~~~~~~I~~v~~~GY~~~~rvlRpA~V~V  137 (137)
T cd00446          68 VEMTLKQLLDVLEKHGVEKIEPEGEPFDPNLHEAVMQVPSPDVEPGTVVEVLQKGYKLGDRVLRPAMVVV  137 (137)
T ss_pred             HHHHHHHHHHHHHHCCCEEECCCCCCCCHHHheeeeeecCCCCCcCEEEEEeecCeEECCEEecccEeEC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999997

The GrpE dimer binds to the ATPase domain of Hsp70 catalyzing the dissociation of ADP, which enables rebinding of ATP, one step in the Hsp70 reaction cycle in protein folding. In eukaryotes, only the mitochondrial Hsp70, not the cytosolic form, is GrpE dependent.

>PF01025 GrpE: GrpE; InterPro: IPR000740 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=100.00  E-value=2.2e-39  Score=284.64  Aligned_cols=150  Identities=45%  Similarity=0.698  Sum_probs=130.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCCCCCCC
Q 018372          181 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTA  260 (357)
Q Consensus       181 ~ee~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~s~d~a  260 (357)
                      +++.+..+++++++++++|.|+.|+|+||++|+.++.++++.++.++|+++||+++|+|++|+.+...            
T Consensus        16 ~~~~l~~l~~~~~~l~~~~~r~~ae~en~~~r~~~e~~~~~~~~~~~~~~~ll~v~D~l~~a~~~~~~------------   83 (165)
T PF01025_consen   16 LEEELEELEKEIEELKERLLRLQAEFENYRKRLEKEKEEAKKYALEKFLKDLLPVLDNLERALEAAKS------------   83 (165)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC-SH------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc------------
Confidence            34445667788899999999999999999999999999999999999999999999999999987531            


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEeeeecEE
Q 018372          261 GAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEV  340 (357)
Q Consensus       261 ~~n~~lksl~eGVeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVLRPA~V  340 (357)
                        .+....|.+||.||+++|.++|.++||++|+|.|++|||++|+||+++++++.++|+|++|+++||+++|||||||+|
T Consensus        84 --~~~~~~~~~g~~~~~~~l~~~L~~~Gv~~i~~~G~~FDp~~heav~~~~~~~~~~~~I~~v~~~GY~~~~rvlRpA~V  161 (165)
T PF01025_consen   84 --NEEEESLLEGLEMILKQLEDILEKNGVEEIEPVGEPFDPNLHEAVETVPDPDKEPGTIVEVVRPGYRLGGRVLRPAEV  161 (165)
T ss_dssp             --HCTCHHHHHHHHHHHHHHHHHHHTTTEEEE--TSSB--TTTEEEEEEECSSSS-CTBEEEECC-EEEETTEEEE-EEE
T ss_pred             --cchHHHHHHHHHHHHHHHHHHHHHCCCEecCCCCCCCCHHHheeheecCcCCCCcCeEEEEEecCEEECCEEeeeeEE
Confidence              112368999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Eeec
Q 018372          341 GVTQ  344 (357)
Q Consensus       341 vVsK  344 (357)
                      +|+|
T Consensus       162 ~V~K  165 (165)
T PF01025_consen  162 VVSK  165 (165)
T ss_dssp             EEEE
T ss_pred             EecC
Confidence            9986

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolysing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. In prokaryotes the grpE protein. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. The X-ray crystal structure of GrpE in complex with the ATPase domain of DnaK revealed that GrpE is an asymmetric homodimer, bent in a manner that favours extensive contacts with only one DnaKATPase monomer []. GrpE does not actively compete for the atomic positions occupied by the nucleotide. GrpE and ADP mutually reduce one another's affinity for DnaK 200-fold, and ATP instantly dissociates GrpE from DnaK.; GO: 0000774 adenyl-nucleotide exchange factor activity, 0042803 protein homodimerization activity, 0051087 chaperone binding, 0006457 protein folding; PDB: 3A6M_A 4ANI_A 1DKG_B.

>PF06156 DUF972: Protein of unknown function (DUF972); InterPro: IPR010377 FUNCTION: Involved in initiation control of chromosome replication

Probab=83.25  E-value=4.1  Score=34.84  Aligned_cols=71  Identities=20%  Similarity=0.185  Sum_probs=39.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhh
Q 018372          174 LVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASS  244 (357)
Q Consensus       174 L~klv~e~ee~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle  244 (357)
                      +.+.+..+-+.+.+++.++.++-+.-.+++-|-+++|+|+.+............-...+.+-.|||.+..+
T Consensus        13 le~~l~~l~~~~~~LK~~~~~l~EEN~~L~~EN~~Lr~~l~~~~~~~~~~~~~~~~~~~~~g~~NL~~LY~   83 (107)
T PF06156_consen   13 LEQQLGQLLEELEELKKQLQELLEENARLRIENEHLRERLEELEQEEEEKEEKKTKKKLGEGRDNLARLYQ   83 (107)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccchHHHHHHHHh
Confidence            33444444444555555666666666677778888888887765521111222233345556666666543

SUBUNIT: Interacts with both DnaA and DnaN, acting as a bridge between these two proteins. SIMILARITY: Belongs to the YabA family.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	357
4ani_A	213	Structural Basis For The Intermolecular Communicati		4e-23
1dkg_A	197	Crystal Structure Of The Nucleotide Exchange Factor		3e-20
3a6m_A	177	Crystal Structure Of Grpe From Thermus Thermophilus		4e-11

>pdb|4ANI|A Chain A, Structural Basis For The Intermolecular Communication Between Dnak And Grpe In The Dnak Chaperone System From Geobacillus Kaustophilus Hta426 Length = 213

Iteration: 1
 Score =  105 bits (261), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 87/153 (56%), Gaps = 14/153 (9%)
Query: 192 MKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFL 251
           + +M+ + LR +A+ EN + RT +E E ++K+  Q+ A  LL V DN  RA        L
Sbjct: 75  LSEMEHRYLRLYADFENFRRRTRQEMEAAEKYRAQSLASDLLPVLDNFERA--------L 126
Query: 252 KIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLP 311
           KI+  N+ A      KS+L+G+EM  + L +  KK GVE  + + +PFDP+ H A+ Q  
Sbjct: 127 KIETDNEQA------KSILQGMEMVYRSLVDALKKEGVEAIEAVGKPFDPYLHQAVMQAE 180
Query: 312 DNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ 344
                P TV   L+ GY L +RV+RPA V V+Q
Sbjct: 181 AEGYEPNTVVEELQKGYKLKDRVLRPAMVKVSQ 213

>pdb|1DKG|A Chain A, Crystal Structure Of The Nucleotide Exchange Factor Grpe Bound To The Atpase Domain Of The Molecular Chaperone Dnak Length = 197

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 13/150 (8%)
Query: 196 QDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDP 255
           +D +LR  AEMEN++ RT  + E + KFA++ F   LL V D+L RA  V        D 
Sbjct: 59  RDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRALEVA-------DK 111
Query: 256 SNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSK 315
           +N      P + +++E +E+T K + +V +KFGVE     N P DP+ H A+  +  +  
Sbjct: 112 AN------PDMSAMVEDIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESDDV 165
Query: 316 PPGTVAHVLKSGYTLYERVIRPAEVGVTQA 345
            PG V  +++ GYTL  R IR A V V +A
Sbjct: 166 APGNVLGIMQKGYTLNGRTIRAAMVTVAKA 195

>pdb|3A6M|A Chain A, Crystal Structure Of Grpe From Thermus Thermophilus Hb8 Length = 177

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 19/156 (12%)
Query: 189 NEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKE 248
            EE+K ++DK LR  A+ +N + R   E +  ++  +    +ALL V D+L RA      
Sbjct: 32  EEELKGLKDKYLRLLADFDNYRKRMEEELKAREREGVLKALRALLPVLDDLDRAL----- 86
Query: 249 NFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMF 308
            F +  P           +S+ +GV         +    GVE+     E FDP  H A+ 
Sbjct: 87  EFAEASP-----------ESIRQGVRAIRDGFFRILAGLGVEEVPGEGEAFDPRYHEAVG 135
Query: 309 QLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ 344
            LP     PG VA V + G+ + E ++RPA V V +
Sbjct: 136 LLPGE---PGKVAKVFQRGFRMGEALVRPARVAVGE 168
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	357
1dkg_A	197	Nucleotide exchange factor GRPE; HSP70, GRPE, nucl	3e-57
4ani_A	213	Protein GRPE; chaperone cycle, complementary assay	5e-53
3a6m_A	177	Protein GRPE, HSP-70 cofactor; coiled-coil, four-h	6e-51

>1dkg_A Nucleotide exchange factor GRPE; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: b.73.1.1 h.1.9.1 Length = 197

 Score =  183 bits (467), Expect = 3e-57
 Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 13/196 (6%)

Query: 150 VSKQTAFSDSDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENV 209
             ++      +     E E S + +    ++   L     E   + +D +LR  AEMEN+
Sbjct: 13  APEEIIMDQHEEIEAVEPEASAEQVDPRDEKVANLEAQLAEAQTRERDGILRVKAEMENL 72

Query: 210 KDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSL 269
           + RT  + E + KFA++ F   LL V D+L RA        L++    +       + ++
Sbjct: 73  RRRTELDIEKAHKFALEKFINELLPVIDSLDRA--------LEVADKANPD-----MSAM 119

Query: 270 LEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYT 329
           +E +E+T K + +V +KFGVE     N P DP+ H A+  +  +   PG V  +++ GYT
Sbjct: 120 VEDIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYT 179

Query: 330 LYERVIRPAEVGVTQA 345
           L  R IR A V V +A
Sbjct: 180 LNGRTIRAAMVTVAKA 195

>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus} Length = 213

 Score =  173 bits (440), Expect = 5e-53
 Identities = 64/228 (28%), Positives = 100/228 (43%), Gaps = 17/228 (7%)

Query: 117 SDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDDLVK 176
             E       T +     +P    +               +  +  +E   +    + + 
Sbjct: 3   QGEKQVMEQATYDEPEREQPIEEEAAPQPEEESGGVPLEEAGGEEAAEPAEKAPTAEELA 62

Query: 177 LLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVA 236
             K +   L AK  EM+    + LR +A+ EN + RT +E E ++K+  Q+ A  LL V 
Sbjct: 63  AAKAQIAELEAKLSEME---HRYLRLYADFENFRRRTRQEMEAAEKYRAQSLASDLLPVL 119

Query: 237 DNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPIN 296
           DN  RA  +  +N                 KS+L+G+EM  + L +  KK GVE  + + 
Sbjct: 120 DNFERALKIETDN--------------EQAKSILQGMEMVYRSLVDALKKEGVEAIEAVG 165

Query: 297 EPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQ 344
           +PFDP+ H A+ Q       P TV   L+ GY L +RV+RPA V V+Q
Sbjct: 166 KPFDPYLHQAVMQAEAEGYEPNTVVEELQKGYKLKDRVLRPAMVKVSQ 213

>3a6m_A Protein GRPE, HSP-70 cofactor; coiled-coil, four-helix bundle, dimer, chaperone, STRE response; 3.23A {Thermus thermophilus} Length = 177

 Score =  167 bits (424), Expect = 6e-51
 Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 19/186 (10%)

Query: 160 DSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAEN 219
           + + E+ +E   + + +  +  EE L A  EE+K ++DK LR  A+ +N + R   E + 
Sbjct: 3   ERNHENTLEKDLEAVGQEAQALEERLKAAEEELKGLKDKYLRLLADFDNYRKRMEEELKA 62

Query: 220 SKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQ 279
            ++  +    +ALL V D+L RA    + +                 +S+ +GV      
Sbjct: 63  REREGVLKALRALLPVLDDLDRALEFAEAS----------------PESIRQGVRAIRDG 106

Query: 280 LGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAE 339
              +    GVE+     E FDP  H A+  LP     PG VA V + G+ + E ++RPA 
Sbjct: 107 FFRILAGLGVEEVPGEGEAFDPRYHEAVGLLPG---EPGKVAKVFQRGFRMGEALVRPAR 163

Query: 340 VGVTQA 345
           V V + 
Sbjct: 164 VAVGEE 169

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	357
4ani_A	213	Protein GRPE; chaperone cycle, complementary assay	100.0
1dkg_A	197	Nucleotide exchange factor GRPE; HSP70, GRPE, nucl	100.0
3a6m_A	177	Protein GRPE, HSP-70 cofactor; coiled-coil, four-h	100.0
3swy_A	46	Cyclic nucleotide-gated cation channel alpha-3; co	84.61
3swf_A	74	CGMP-gated cation channel alpha-1; coiled-coil, as	81.54

>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}

Probab=100.00  E-value=6.3e-46  Score=343.13  Aligned_cols=152  Identities=36%  Similarity=0.568  Sum_probs=140.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCCCCC
Q 018372          179 KEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSND  258 (357)
Q Consensus       179 ~e~ee~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~s~d  258 (357)
                      ..++..|+.+++++++++|+|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+.+.          
T Consensus        62 ~~l~~~l~~l~~e~~el~d~~lR~~AEfeN~RkR~~rE~e~~~~~a~e~~~~~LLpVlDnlerAl~~~~~----------  131 (213)
T 4ani_A           62 AAAKAQIAELEAKLSEMEHRYLRLYADFENFRRRTRQEMEAAEKYRAQSLASDLLPVLDNFERALKIETD----------  131 (213)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHSCCSC----------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhccc----------
Confidence            3445567778899999999999999999999999999999999999999999999999999999986432          


Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEeeeec
Q 018372          259 TAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPA  338 (357)
Q Consensus       259 ~a~~n~~lksl~eGVeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVLRPA  338 (357)
                          +..+++|++||+||+++|.++|.++||++|+++|++|||++|+||++++++++++|||++|+|+||+|+|||||||
T Consensus       132 ----~~~~~~l~eGvemi~k~l~~~L~k~Gv~~I~~~Ge~FDP~~HeAv~~v~~~~~~~gtVv~V~qkGY~l~dRVLRpA  207 (213)
T 4ani_A          132 ----NEQAKSILQGMEMVYRSLVDALKKEGVEAIEAVGKPFDPYLHQAVMQAEAEGYEPNTVVEELQKGYKLKDRVLRPA  207 (213)
T ss_dssp             ----CSTHHHHHHHHHHHHHHHHHHHHHTTEECCCCSSSCCCTTTEEEEEEECCSSSCSSSEEEEEECCCEETTSCCSCE
T ss_pred             ----cccHHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCCHHHceeeeeecCCCCCCCcEEEEEeCCeEECCEEeece
Confidence                1235789999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeec
Q 018372          339 EVGVTQ  344 (357)
Q Consensus       339 ~VvVsK  344 (357)
                      +|+|++
T Consensus       208 ~V~Va~  213 (213)
T 4ani_A          208 MVKVSQ  213 (213)
T ss_dssp             EEEEEC
T ss_pred             EEEeCC
Confidence            999985

>1dkg_A Nucleotide exchange factor GRPE; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: b.73.1.1 h.1.9.1

Probab=100.00  E-value=9.8e-46  Score=338.00  Aligned_cols=155  Identities=37%  Similarity=0.560  Sum_probs=135.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCC
Q 018372          176 KLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDP  255 (357)
Q Consensus       176 klv~e~ee~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~  255 (357)
                      ..++++++++++++.   +++|+|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+...       
T Consensus        42 ~~~~~l~~~l~e~~~---~~~d~~lR~~Ae~eN~rkR~~ke~~~~~~~a~~~~~~~LLpv~DnlerAl~~~~~-------  111 (197)
T 1dkg_A           42 EKVANLEAQLAEAQT---RERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRALEVADK-------  111 (197)
T ss_dssp             HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSGGGHHHHSHHHHHHHHHHHHCC---------
T ss_pred             HHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhcc-------
Confidence            334444444444332   4778999999999999999999999999999999999999999999999986531       


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEee
Q 018372          256 SNDTAGAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVI  335 (357)
Q Consensus       256 s~d~a~~n~~lksl~eGVeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVL  335 (357)
                            .++.+++|++||+||+++|.++|+++||++|+++|++|||++|+||++++++++++|||++|+|+||+||||||
T Consensus       112 ------~~~~~~~l~~Gv~~~~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~~tVv~v~qkGY~l~dRvL  185 (197)
T 1dkg_A          112 ------ANPDMSAMVEDIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTLNGRTI  185 (197)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHTTTTEEEECCCSSBCCTTSEEEEEEEECSSSCTTBEEEEEECEEEETTEEE
T ss_pred             ------ccchHHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCCHHHhheeeeecCCCCCcCeEEEEeeCCeeeCCEEe
Confidence                  01235789999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eecEEEeecCC
Q 018372          336 RPAEVGVTQAV  346 (357)
Q Consensus       336 RPA~VvVsK~~  346 (357)
                      |||+|+|++++
T Consensus       186 RpA~V~V~~~~  196 (197)
T 1dkg_A          186 RAAMVTVAKAK  196 (197)
T ss_dssp             ECEEEEEEECC
T ss_pred             cceEEEecCCC
Confidence            99999999854

>3a6m_A Protein GRPE, HSP-70 cofactor; coiled-coil, four-helix bundle, dimer, chaperone, STRE response; 3.23A {Thermus thermophilus}

Probab=100.00  E-value=6.3e-46  Score=334.58  Aligned_cols=147  Identities=33%  Similarity=0.501  Sum_probs=136.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhcccCCCCCCCC
Q 018372          181 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTA  260 (357)
Q Consensus       181 ~ee~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~Aie~f~kdLLpVlDnLERAle~~~e~~~k~d~s~d~a  260 (357)
                      +++.+..+++++++++++|+|++|||+|||||+++|++++++||+++|+++||||+|||+||+.+.+.            
T Consensus        24 l~~~~~~l~~e~~e~~d~~lR~~Ae~eN~rkR~~rE~e~~~~~a~e~~~~~LLpVlDnlerAl~~~~~------------   91 (177)
T 3a6m_A           24 LEERLKAAEEELKGLKDKYLRLLADFDNYRKRMEEELKAREREGVLKALRALLPVLDDLDRALEFAEA------------   91 (177)
T ss_dssp             TTTSTTGGGGTSSSHHHHHHTTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGG------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhc------------
Confidence            34445667788899999999999999999999999999999999999999999999999999986531            


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEeeeecEE
Q 018372          261 GAVPLLKSLLEGVEMTEKQLGEVFKKFGVEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEV  340 (357)
Q Consensus       261 ~~n~~lksl~eGVeMi~kqL~~vL~k~GVe~IepvGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVLRPA~V  340 (357)
                        +  +++|++||+||+++|.++|+++||++|+++|++|||++|+||+++++   ++|||++|+|+||+|+|||||||+|
T Consensus        92 --~--~~~l~~Gv~m~~~~l~~~L~k~Gv~~i~~~Ge~FDP~~HeAv~~~~~---~~gtVv~v~qkGY~l~dRvLRpA~V  164 (177)
T 3a6m_A           92 --S--PESIRQGVRAIRDGFFRILAGLGVEEVPGEGEAFDPRYHEAVGLLPG---EPGKVAKVFQRGFRMGEALVRPARV  164 (177)
T ss_dssp             --C--HHHHHHHHHHHHHHHHHHHHHTTCEECCCTTSBCCTTTEEEEEEEES---STTBEEEEEECCEEETTEEEECEEE
T ss_pred             --c--HHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCCHHHhhhhhcccC---CcCeEEEEeecCeeeCCEEecCeEE
Confidence              1  46899999999999999999999999999999999999999999987   8999999999999999999999999


Q ss_pred             EeecCC
Q 018372          341 GVTQAV  346 (357)
Q Consensus       341 vVsK~~  346 (357)
                      +|++++
T Consensus       165 ~V~~~~  170 (177)
T 3a6m_A          165 AVGEEK  170 (177)
T ss_dssp             EEEECC
T ss_pred             EEeCCC
Confidence            999976

>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}

Probab=84.61  E-value=5.2  Score=28.63  Aligned_cols=41  Identities=15%  Similarity=0.179  Sum_probs=32.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018372          181 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSK  221 (357)
Q Consensus       181 ~ee~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~ak  221 (357)
                      +|+.+..++.-++-|+.++.|+.|||+....++.+-+..+.
T Consensus         3 lEekv~~Le~~ld~LqTr~ArLlae~~ssq~KlKqRit~lE   43 (46)
T 3swy_A            3 LEEKVEQLGSSLDTLQTRFARLLAEYNATQMKMKQRLSQLE   43 (46)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45666677778889999999999999998888877665543

>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}

Probab=81.54  E-value=11  Score=29.55  Aligned_cols=43  Identities=21%  Similarity=0.322  Sum_probs=34.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018372          181 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKF  223 (357)
Q Consensus       181 ~ee~L~e~~~EleelkDk~lR~~AEfEN~RKR~~rE~e~akk~  223 (357)
                      +|+.+..++.-++-|+.++.|++|+|+....++.+-+..+..+
T Consensus         5 lEEKv~~LE~sld~LQTrfARLLaEy~ssQ~KLKqRit~LE~~   47 (74)
T 3swf_A            5 LEEKVTRMESSVDLLQTRFARILAEYESMQQKLKQRLTKVEKF   47 (74)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4555666777788899999999999999998888877666554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	357
d1dkga1	59	b.73.1.1 (A:139-197) Head domain of nucleotide exc	2e-21

>d1dkga1 b.73.1.1 (A:139-197) Head domain of nucleotide exchange factor GrpE {Escherichia coli [TaxId: 562]} Length = 59

class: All beta proteins
fold: Head domain of nucleotide exchange factor GrpE
superfamily: Head domain of nucleotide exchange factor GrpE
family: Head domain of nucleotide exchange factor GrpE
domain: Head domain of nucleotide exchange factor GrpE
species: Escherichia coli [TaxId: 562]

 Score = 84.6 bits (210), Expect = 2e-21
 Identities = 22/57 (38%), Positives = 30/57 (52%)

Query: 289 VEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQA 345
           VE     N P DP+ H A+  +  +   PG V  +++ GYTL  R IR A V V +A
Sbjct: 1   VEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKA 57

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	357
d1dkga1	59	Head domain of nucleotide exchange factor GrpE {Es	99.86

>d1dkga1 b.73.1.1 (A:139-197) Head domain of nucleotide exchange factor GrpE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Head domain of nucleotide exchange factor GrpE
superfamily: Head domain of nucleotide exchange factor GrpE
family: Head domain of nucleotide exchange factor GrpE
domain: Head domain of nucleotide exchange factor GrpE
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=8.8e-23  Score=152.79  Aligned_cols=58  Identities=38%  Similarity=0.596  Sum_probs=56.1

Q ss_pred             CeeeCCCCCCCCccccceeeeccCCCCCCCceEEEeeccceeCCEeeeecEEEeecCC
Q 018372          289 VEKFDPINEPFDPHRHNAMFQLPDNSKPPGTVAHVLKSGYTLYERVIRPAEVGVTQAV  346 (357)
Q Consensus       289 Ve~IepvGe~FDPnlHEAV~~v~~~e~e~gtVveVlqkGY~L~dRVLRPA~VvVsK~~  346 (357)
                      |+.|+++|++|||++||||+++++++.++|+|++|+|+||+|+|||||||+|+|+|++
T Consensus         1 ve~i~~~g~~FDP~~HeAv~~~~~~~~~~~~I~~v~~~GY~~~~rvlRpA~V~V~k~~   58 (59)
T d1dkga1           1 VEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKAK   58 (59)
T ss_dssp             EEEECCCSSBCCTTSEEEEEEEECSSSCTTBEEEEEECEEEETTEEEECEEEEEEECC
T ss_pred             CceeCCCCCCCCHHHceEeeEecCCCCCCCEEEEEEeCCcEECCEEeeccEEEEecCC
Confidence            5789999999999999999999999999999999999999999999999999999976